BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042908
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 163/248 (65%), Gaps = 26/248 (10%)
Query: 3 LENRNTSDDQPAGVMGF--FSNGSFFDHHQQPQLCMSFADNNIQ-------SEALVVPSI 53
+ NR+ ++ GF FSN F HHQQ + ++F DN S V+
Sbjct: 25 MNNRSAPENSHMNGHGFMAFSNVGFSIHHQQ-EFPVNFRDNTQSPVHAGGLSAVQVLQFS 83
Query: 54 GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNE 113
DF +T GK +S PASGS L N + L GRKRKR+NE
Sbjct: 84 SQPGDFGQETKTGKVNF---------VSSPPASGSEFLGDN------KNLGGRKRKRSNE 128
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
R KP+EVIHVRAKRGQATDSHSLAERVRREKINE+LRCLQDLVPGCYKTMGMAVMLDV
Sbjct: 129 RENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDV 188
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMPGTNECDAQDMERMVREGYGG 232
IINYV+SLQNQIEFLSMKLSAAS +YDFN SE + ETM GTN + ++ER V+EGYGG
Sbjct: 189 IINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKEGYGG 248
Query: 233 PSYFHSAW 240
PS+ HS W
Sbjct: 249 PSHLHSTW 256
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/250 (56%), Positives = 163/250 (65%), Gaps = 26/250 (10%)
Query: 3 LENRNTSDDQPAGVMGF--FSNGSFFDHHQQPQLCMSFADNNIQ-------SEALVVPSI 53
+ NR+ ++ GF FSN F HHQQ + ++F DN S V+
Sbjct: 8 MNNRSAPENSHMNGHGFMAFSNVGFSIHHQQ-EFPVNFRDNTQSPVHAGGLSAVQVLQFS 66
Query: 54 GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNE 113
DF +T GK +S PASGS L N + L GRKRKR+NE
Sbjct: 67 SQPGDFGQETKTGKVNF---------VSSPPASGSEFLGDN------KNLGGRKRKRSNE 111
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
R KP+EVIHVRAKRGQATDSHSLAERVRREKINE+LRCLQDLVPGCYKTMGMAVMLDV
Sbjct: 112 RENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDV 171
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMPGTNECDAQDMERMVREGYGG 232
IINYV+SLQNQIEFLSMKLSAAS +YDFN SE + ETM GTN + ++ER V+EGYGG
Sbjct: 172 IINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKEGYGG 231
Query: 233 PSYFHSAWSL 242
PS+ HS W
Sbjct: 232 PSHLHSTWPF 241
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/250 (56%), Positives = 163/250 (65%), Gaps = 26/250 (10%)
Query: 3 LENRNTSDDQPAGVMGF--FSNGSFFDHHQQPQLCMSFADNNIQ-------SEALVVPSI 53
+ NR+ ++ GF FSN F HHQQ + ++F DN S V+
Sbjct: 4 MNNRSAPENSHMNGHGFMAFSNVGFSIHHQQ-EFPVNFRDNTQSPVHAGGLSAVQVLQFS 62
Query: 54 GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNE 113
DF +T GK +S PASGS L N + L GRKRKR+NE
Sbjct: 63 SQPGDFGQETKTGKVNF---------VSSPPASGSEFLGDN------KNLGGRKRKRSNE 107
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
R KP+EVIHVRAKRGQATDSHSLAERVRREKINE+LRCLQDLVPGCYKTMGMAVMLDV
Sbjct: 108 RENNKPREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDV 167
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMPGTNECDAQDMERMVREGYGG 232
IINYV+SLQNQIEFLSMKLSAAS +YDFN SE + ETM GTN + ++ER V+EGYGG
Sbjct: 168 IINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAEALETMQGTNAYEVHEVERSVKEGYGG 227
Query: 233 PSYFHSAWSL 242
PS+ HS W
Sbjct: 228 PSHLHSTWPF 237
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 120/152 (78%), Gaps = 3/152 (1%)
Query: 91 LSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINER 150
+S N KG R + + ++ EKPKEV+HVRA+RGQATDSHSLAERVRR KINER
Sbjct: 42 VSENGKGKNNSRRGKRTKSKEDD---EKPKEVVHVRARRGQATDSHSLAERVRRGKINER 98
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTET 210
LRCLQD+VPGCYKTMGMAVMLD IINYV+SLQNQ+EFLSMKL+AAS +YDFNSE D ET
Sbjct: 99 LRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSETDAIET 158
Query: 211 MPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
M +A+++ER+++EGYGG + FH WSL
Sbjct: 159 MQRAKAQEAKEIERVMKEGYGGLTNFHPTWSL 190
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 125/162 (77%), Gaps = 1/162 (0%)
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAE 140
P +S + +V+ G+ ++ SGR KR ++N EK KEV+HVRA+RGQATDSHSLAE
Sbjct: 112 PETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAE 171
Query: 141 RVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYD 200
RVRR KINE+LRCLQ++VPGCYKTMGMAVMLD IINYV+SLQ+Q+EFLS+KL+AAS +YD
Sbjct: 172 RVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYD 231
Query: 201 FNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
FNSE D ETM +A+++ + +EGYGG S+F AW L
Sbjct: 232 FNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQPAWPL 273
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 125/162 (77%), Gaps = 1/162 (0%)
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAE 140
P +S + +V+ G+ ++ SGR KR ++N EK KEV+HVRA+RGQATDSHSLAE
Sbjct: 111 PETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAE 170
Query: 141 RVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYD 200
RVRR KINE+LRCLQ++VPGCYKTMGMAVMLD IINYV+SLQ+Q+EFLS+KL+AAS +YD
Sbjct: 171 RVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYD 230
Query: 201 FNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
FNSE D ETM +A+++ + +EGYGG S+F AW L
Sbjct: 231 FNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQPAWPL 272
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 108/125 (86%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
KPK+V+HVRA+RGQATDSHSLAERVRR KINERLRCLQD+VPGCYKTMGMAVMLD IINY
Sbjct: 149 KPKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINY 208
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFH 237
V+SLQNQ+EFLSMKL+AAS +YDFN+E D ETM +A++++R +REG GG ++ H
Sbjct: 209 VQSLQNQVEFLSMKLTAASTFYDFNAETDAIETMQRAKAQEAKELQRAMREGSGGFAHIH 268
Query: 238 SAWSL 242
S WSL
Sbjct: 269 STWSL 273
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 145/221 (65%), Gaps = 19/221 (8%)
Query: 30 QQPQLCMSFADNN--------IQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLS 81
QQP+ ++ N I S A VV ++ L + SHD S +K+ + S+ +S
Sbjct: 56 QQPEFTATYDHKNLSSTFHPDILSTATVVHTVTLNQNDSHD-SKKRKSMEQSTSSY--IS 112
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAER 141
PT ++ N+ L G K+ N E+ +K +EVIHVRAKRGQATDSHS+AER
Sbjct: 113 PTAST--------NETKKKNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQATDSHSIAER 164
Query: 142 VRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
VRREKIN +LRCLQDLVPGC+++MGMAVML+ IINYV SLQNQ+EFLSM+L+AAS D
Sbjct: 165 VRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDL 224
Query: 202 NSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
N+ ++++ GT+ +AQ ++ +RE YG + FHSAWS+
Sbjct: 225 NNLTESSKRAQGTDSTEAQKTQKWLRERYGEITCFHSAWSI 265
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 131/184 (71%), Gaps = 9/184 (4%)
Query: 61 HDTSNGKKAAAHTV-ESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEK- 118
HD +N +K+ V ES +S S SG + + G G KR ++ E+ EK
Sbjct: 89 HDINNKRKSMPMDVSESTSGISTPQVSESGFNTKYSSGKG-------KRLKSLEKEEEKS 141
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
+EV+HVRA+RGQATDSHSLAERVRR KINERLRCL+D+VPGCYKTMGMAVMLD IINYV
Sbjct: 142 TREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYV 201
Query: 179 RSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHS 238
+SLQNQ+EFLSMKL+AAS +YDFNSE D + +A+++ER+++EGYGG + FHS
Sbjct: 202 QSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKAHEAKELERLMKEGYGGIACFHS 261
Query: 239 AWSL 242
L
Sbjct: 262 NLPL 265
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 136/206 (66%), Gaps = 13/206 (6%)
Query: 37 SFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNK 96
+F D+N ++VP I + + H+ G+K A + P+S + +V
Sbjct: 50 NFPDHN--EVPVLVPIINSVKNEIHE---GQKRKATDIWE-------PSSANSTPAVFES 97
Query: 97 GTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
G+ + GR KR + N +KP EV+HVRAKRGQATDSHSLAERVRR KINE+LRCLQ
Sbjct: 98 GSKTKNSCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQ 157
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTN 215
++VPGCYKTMGMA+MLD IINYV+SLQ+Q+EFLSMKL+AAS YYDFNSE D ETM
Sbjct: 158 NIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLETMQRAR 217
Query: 216 ECDAQDMERMVREGYGGPSYFHSAWS 241
+ ++++R VRE G S F WS
Sbjct: 218 ASEVKELDRYVREECEGVSCFEPTWS 243
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 150/228 (65%), Gaps = 19/228 (8%)
Query: 20 FSNGSFFDHHQQPQLCMSFADNNI-----QSEALVVP---SIGLIADFSHDTSNGKKAAA 71
F++ +FF H Q P+ +FA + + Q++ V+P + + A S + ++A
Sbjct: 53 FTSNNFFSH-QAPEFPGNFAGSFLPGSFHQNDQNVMPVSQTFTIPAKESEFQESKRRAMD 111
Query: 72 HTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRG 130
+ S MN P V+ G+ + S R KR ++NE EK +EV+HVRA+RG
Sbjct: 112 VSESSCMNSYP---------RVSESGSKKRKSSRRGKRVKSNEEEEEKTREVVHVRARRG 162
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
QATDSHSLAERVRR KINERLRCLQD+VPGCYKTMGMAVMLD IINYV+SLQNQ+EFLSM
Sbjct: 163 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 222
Query: 191 KLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHS 238
KL+AAS +YDFN+E + ET+ + ++++R +REG GG + HS
Sbjct: 223 KLTAASTFYDFNAETEAIETVQRAKAQETKELQRAMREGSGGLAQSHS 270
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 127/192 (66%), Gaps = 8/192 (4%)
Query: 50 VPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGR-KR 108
VP + I ++ G+K A + P+S + +V+ G+ + SGR KR
Sbjct: 64 VPVLVPIGSVKNEIHEGQKRKATDI-------CEPSSANSTPAVSESGSKTKNSSGRGKR 116
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
+ N +KP EV+HVRAKRGQATDSHSLAERVRR KINE+LRCLQ++VPGCYKTMGMA
Sbjct: 117 VKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMA 176
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVRE 228
+MLD IINYV+SLQ+Q+EFLSMKL+AAS YYD NSE D ETM + +++ + VRE
Sbjct: 177 IMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETMQRARASEVKELGKCVRE 236
Query: 229 GYGGPSYFHSAW 240
G S F W
Sbjct: 237 GSEEVSCFEPTW 248
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 132/201 (65%), Gaps = 12/201 (5%)
Query: 18 GFFSNGSF-------FDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSHDTSNGKKAA 70
GFF N S F Q P+ + ++ Q A+ + + A S + +KA
Sbjct: 38 GFFDNPSLNFQALETFFSQQPPEFPGNLSEIFQQKVAVPMAQAEVSAGDSLCENKKRKAR 97
Query: 71 AHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRG 130
ES S TPA SGL +G G G++ ++ E+ EKP+EV+HVRA+RG
Sbjct: 98 VDASESSSGNSSTPACESGL----KRGKNSSG-RGKRAMKSIEKEDEKPREVVHVRARRG 152
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
QATDSHSLAERVRR KINERLRCLQD+VPGCYKTMGMAVMLD IINYV+SLQNQ+EFLSM
Sbjct: 153 QATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 212
Query: 191 KLSAASMYYDFNSELDTTETM 211
KL+AAS YYDFNS+ DT ET+
Sbjct: 213 KLTAASQYYDFNSDTDTLETI 233
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 118/161 (73%), Gaps = 6/161 (3%)
Query: 83 TPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERV 142
T +S S +S+N + S R+ KR+ R EK +EV+HVRA+RGQATDSHS+AERV
Sbjct: 108 TLSSSSAQVSLNGNSL-TKNNSSRRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERV 166
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RR KINERL+CLQD+VPGCYKTMGMA MLD IINYV+SLQNQ+EFLSMKL+AAS YYDFN
Sbjct: 167 RRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 226
Query: 203 SELDTTETMPGTNECDAQDMERMVREGYGGPSYFH-SAWSL 242
SE D E+M +A +M +G G S FH S+W+L
Sbjct: 227 SETDAVESMQRAKAREAVEMG----QGRDGNSVFHSSSWTL 263
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
Query: 85 ASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVR 143
+S + +V+ G+ ++ SGR KR ++N EK KEV+HVRA+RGQATDSHSLAERVR
Sbjct: 116 SSANSTPAVSESGSRIKNNSGRGKRAKSNVTEEEKEKEVVHVRARRGQATDSHSLAERVR 175
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
R KINE+LRCLQ++VPGCYKTMGMAVMLD IINYV+SLQ+Q+EFLS+KL+AAS YYDFNS
Sbjct: 176 RGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNS 235
Query: 204 ELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
E D ETM +A+++ R RE YGG S F W L
Sbjct: 236 ETDAIETMQRARASEAKELARYKREEYGGISCFQPTWPL 274
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 155/249 (62%), Gaps = 19/249 (7%)
Query: 1 MALENRNTSDDQPAGVMGFFSNGSFFDHHQQPQLCMSFADN---NIQSEAL----VVPSI 53
+ LEN N +D ++ HQQP+L +FA N + +S L VV S+
Sbjct: 83 IMLENFNITDVSVENLLA----------HQQPELMGTFAYNLQSSFESNGLSSMPVVQSM 132
Query: 54 GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNE 113
+ H++ ++ +S + ASGSGL +++ G+K + +++
Sbjct: 133 PSSGNAFHESK--RRKVMEQSKSSSENISSMASGSGLKEISSTKKKNNLGKGKKGRNSDK 190
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
+++KP EVIHVRA+RGQATD+HS+AERVRREKI RLRCLQDLVPGCYK GMAVMLD
Sbjct: 191 ELLDKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDE 250
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGP 233
IINYV SLQNQ+EFLS +L+AAS ++FNSE + + GTN + Q+ME++VR+GYG
Sbjct: 251 IINYVHSLQNQVEFLSRELAAASSLHNFNSETEAIKNAQGTNTHEGQEMEKIVRKGYGEH 310
Query: 234 SYFHSAWSL 242
S F+ ++
Sbjct: 311 SCFYPTRTI 319
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 120/160 (75%), Gaps = 3/160 (1%)
Query: 84 PASGSGLLSVNNKGTGMQGLSGR-KRKRNN--ERVVEKPKEVIHVRAKRGQATDSHSLAE 140
P+S + SV+ + ++ SGR KR + N E +K +V+HVRA+RGQATDSHSLAE
Sbjct: 108 PSSANSTPSVSESESKIKNCSGRGKRVKKNMMEEEDKKSTQVVHVRARRGQATDSHSLAE 167
Query: 141 RVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYD 200
RVRR KINE+L+CLQ++VPGCYKTMGMA+MLD IINYV+SLQ+Q+EFLSMKL+AAS +YD
Sbjct: 168 RVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYD 227
Query: 201 FNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAW 240
FNSE+++ E M +A+++ + V EGY G S F W
Sbjct: 228 FNSEINSLEAMQRARVSEAKELAKYVTEGYEGVSCFQPTW 267
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 147/232 (63%), Gaps = 12/232 (5%)
Query: 20 FSNGSFFDHHQQPQLCMSFADN--------NIQSEALVVPSIGLIADFSHDTSNGKKAAA 71
FS SFF H QQP+ ++ N +I S A +V S+ L + H+ KA
Sbjct: 48 FSADSFFAH-QQPEFPATYNHNKLSSTSHPHILSTAPLVHSVSLNQNVFHE-RKKPKAME 105
Query: 72 HTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQ 131
+ S N+SPT AS + N + K+ +N E+ +K KEVIHVRAKRGQ
Sbjct: 106 QSTGSSKNVSPT-ASINITEKKNILTPSLCAKRRGKKGKNKEKEGDKSKEVIHVRAKRGQ 164
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
ATDSHS+AER+RREKIN +LRCLQD+VPGC+K+MGMAVML+ IINYV SLQNQ+EFLSM+
Sbjct: 165 ATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSME 224
Query: 192 LSAASMYYDFNSELDTTETMPGTNEC-DAQDMERMVREGYGGPSYFHSAWSL 242
L+AAS D + ++++ GTN DAQ+ ++ RE YG + FHS WS+
Sbjct: 225 LAAASCSNDLKNLTESSKKAQGTNSTDDAQETQKWSRERYGEITCFHSTWSI 276
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 103/126 (81%), Gaps = 2/126 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+KPK+V+HVRAKRGQATDSHSLAERVRREKINERL+CLQDLVPGCYK MGMAVMLDVII+
Sbjct: 39 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 98
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNS-ELDTTETMPGTNECDAQDMERMVREGYGG-PS 234
YVRSLQNQIEFLSMKLSAAS YD NS +++ T+ G N A +MER++RE G P
Sbjct: 99 YVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESVGTQPP 158
Query: 235 YFHSAW 240
F S
Sbjct: 159 NFSSTL 164
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+KPK+V+HVRAKRGQATDSHSLAERVRREKINERL+CLQDLVPGCYK MGMAVMLDVII
Sbjct: 95 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNS-ELDTTETMPGTNECDAQDMERMVREGYGG-P 233
+YVRSLQNQIEFLSMKLSAAS YD NS +++ T+ G N A +MER++RE G P
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESVGTQP 214
Query: 234 SYFHSAWSL 242
F S
Sbjct: 215 PNFSSTLPF 223
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+KPK+V+HVRAKRGQATDSHSLAERVRREKINERL+CLQDLVPGCYK MGMAVMLDVII
Sbjct: 95 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNS-ELDTTETMPGTNECDAQDMERMVREGYGG-P 233
+YVRSLQNQIEFLSMKLSAAS YD NS +++ T+ G N A +MER++RE G P
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESVGTQP 214
Query: 234 SYFHSAWSL 242
F S
Sbjct: 215 PNFSSTLPF 223
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 136/236 (57%), Gaps = 31/236 (13%)
Query: 20 FSNGSFFDHHQQPQ------------LCMSFADNNIQSEALVVPSIGLIADFSHDTSNGK 67
FS S +HHQQ L + N + L +P+I + H +
Sbjct: 46 FSCDSILEHHQQEHVFPRNLEENFHGLVHHVNNQNHNAVQLSLPTIFQEENKVHHEGKKR 105
Query: 68 KAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVR 126
K M+ T +SG+ +V+ G+ + GR KR ++ E EK KEV+HVR
Sbjct: 106 K--------MMDFQET-SSGNSTPAVSESGSKTKLSGGRGKRVKSYETEEEKAKEVVHVR 156
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+RGQATDSHSLAERVRR KINE+L+CLQ++VPGCYKTMGMAVMLD IINY
Sbjct: 157 ARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINY--------- 207
Query: 187 FLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
FLS+KL+AAS YYDFNSE D ETM +A+++ R R+GYGG S F W L
Sbjct: 208 FLSLKLTAASTYYDFNSEADDLETMQRARASEAKELARYKRDGYGGISCFQPTWPL 263
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 148/247 (59%), Gaps = 26/247 (10%)
Query: 14 AGVMGFFSNGSFFDHHQQPQLC------MSFADNNIQSEALVVPSIGLIADFSHDTSNGK 67
+ +M +FS +F Q+P+ F N++ + S+ + ++ GK
Sbjct: 43 SNLMPYFSFDTFLLGPQEPEFPGNLEEDFPFLFNHVNHNNALPISLPIFQA-ENEIHEGK 101
Query: 68 KAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVR 126
K + + +++ TP V+ G + SGR KR +NN EK KEV++VR
Sbjct: 102 KRKSMDLPETSSVNSTP-------KVSESGNKFKHSSGRGKRVKNNVTEEEKAKEVVNVR 154
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+ GQATDS +LAERVRR KINE+LR LQ++VPGCYKTMGMAVMLD IINYV+SLQNQ+E
Sbjct: 155 ARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVE 214
Query: 187 FLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGG----------PSYF 236
FLS+KL+A S +YDFNSE+D ETM +A+++ REGYGG PS
Sbjct: 215 FLSLKLTAPSTFYDFNSEIDALETMQRARASEAKELGMYKREGYGGCALLEHLNVAPSQL 274
Query: 237 HS-AWSL 242
HS +W++
Sbjct: 275 HSNSWAM 281
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 135/219 (61%), Gaps = 27/219 (12%)
Query: 26 FDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPA 85
F HHQ Q+ + + + L F +D KK +++ + +
Sbjct: 67 FSHHQANQIITPTSSPVFEPKNL----------FGNDLHGSKKRKLENNDAYES-----S 111
Query: 86 SGSGLLSVNNKGTGMQGLSGRKR--KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVR 143
SG+ V+ G + +G+++ K+ + EKP+EV+HVRA+RGQATDSHS+AER+R
Sbjct: 112 SGNSTPQVSENGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIR 171
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
R KINERLRCLQD+VPGCYKTMGMAVMLD IINYV+SLQNQ+EFLSMKL+AAS Y+DFNS
Sbjct: 172 RGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYHDFNS 231
Query: 204 ELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
+ D + + G + +REG GG S S+ L
Sbjct: 232 DSDAEDKLKG----------KEIREGNGGISMIGSSTQL 260
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 118/161 (73%), Gaps = 6/161 (3%)
Query: 83 TPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERV 142
T ++ S +S+N + S R+ KR+ R EK +EV+HVRA+RGQATDSHS+AERV
Sbjct: 106 TLSTSSAQVSING-NISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERV 164
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RR KINERL+CLQD+VPGCYKTMGMA MLD IINYV+SLQNQ+EFLSMKL+AAS YYDFN
Sbjct: 165 RRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 224
Query: 203 SELDTTETMPGTNECDAQDMERMVREGYGGPSYFH-SAWSL 242
SE D E+M +A +M +G G S FH S+W+L
Sbjct: 225 SETDAVESMQKAKAREAVEMG----QGRDGSSVFHSSSWTL 261
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
S R+ KR+ R EK +EV+HVRA+RGQATDSHS+AERVRR KINERL+CLQD+VPGCYK
Sbjct: 115 SSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYK 174
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDME 223
TMGMA MLD IINYV+SLQNQ+EFLSMKL+AAS YYDFNSE D E+M +A +M
Sbjct: 175 TMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEMG 234
Query: 224 RMVREGYGGPSYFH-SAWSL 242
+G G S FH S+W+L
Sbjct: 235 ----QGRDGSSVFHSSSWTL 250
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
V+HVRA+RGQATDSHSLAERVRR KINERLRCLQD+VPGCYK MGMA MLD IINYV+SL
Sbjct: 142 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 201
Query: 182 QNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWS 241
QNQ+EFLSMKL+AAS +YDFNSE D ++M + +M R R+ G P + S WS
Sbjct: 202 QNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGRQTRD--GSPVFHLSTWS 259
Query: 242 L 242
L
Sbjct: 260 L 260
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 138/226 (61%), Gaps = 21/226 (9%)
Query: 24 SFFDHHQQPQLCMSF------ADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESF 77
S F HH+ PQ +DNN+ + + + S SH+ + K ++
Sbjct: 52 SLFLHHRHPQQLHDLPGKYPGSDNNLSATSTLYHS-------SHNNVDETKKRKALLQPL 104
Query: 78 MNLSPTPASGSGLLSVNNKGTGMQGLSGR-KRKRNNERVVEKPKEVIHVRAKRGQATDSH 136
+ + S L++N TG S R KR + + EK +EV+HVRA+RGQATDSH
Sbjct: 105 SSSENSSVSDQ--LNINTTKTG---CSRRGKRLKKKNQEEEKEREVVHVRARRGQATDSH 159
Query: 137 SLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS 196
SLAERVRR KINERLRCLQD+VPGCYK+MGMA MLD IINYV+SLQNQ+E LSMKL+AAS
Sbjct: 160 SLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQVELLSMKLTAAS 219
Query: 197 MYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
+YDFNSE D ++M +A +M R R+ G P SAWSL
Sbjct: 220 SFYDFNSETDAVDSMQRAKAREAVEMGRQTRD--GNPVLHLSAWSL 263
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 119/161 (73%), Gaps = 7/161 (4%)
Query: 83 TPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERV 142
T ++ S +S+N + S R+ KR+ R EK +EV+HVRA+RGQATDSHS+AERV
Sbjct: 106 TLSTSSAQVSING-NISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERV 164
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RR KINERL+CLQD+VPGCYKTMGMA MLD IINYV+SLQNQ+EFLSMKL+AAS YYDFN
Sbjct: 165 RRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 224
Query: 203 SELDTTETMPGTNECDAQDMERMVREGYGGPSYFH-SAWSL 242
SE D E+M + A++ M +G G S FH S+W+L
Sbjct: 225 SETDAVESM----QAKAREAVEM-GQGRDGSSVFHSSSWTL 260
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
V+HVRA+RGQATDSHSLAERVRR KINERLRCLQD+VPGCYK MGMA MLD IINYV+SL
Sbjct: 1036 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 1095
Query: 182 QNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWS 241
QNQ+EFLSMKL+AAS +YDFNSE D ++M + +M R R+ G P + S WS
Sbjct: 1096 QNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGRQTRD--GSPVFHLSTWS 1153
Query: 242 L 242
L
Sbjct: 1154 L 1154
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
V+HVRA+RGQATDSHSLAERVRR KINERLRCLQD+VPGCYK MGMA MLD IINYV+SL
Sbjct: 1025 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 1084
Query: 182 QNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAWS 241
QNQ+EFLSMKL+AAS +YDF+SE D ++M + +M R R+ G P + S WS
Sbjct: 1085 QNQVEFLSMKLNAASSFYDFSSETDAVDSMQRAKARETVEMGRQTRD--GSPVFHLSTWS 1142
Query: 242 L 242
L
Sbjct: 1143 L 1143
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 139/243 (57%), Gaps = 28/243 (11%)
Query: 20 FSNGSFFDHHQQPQLCMS------FADNNIQSEAL--------VVPSIGLIADFSHDT-- 63
FS SF H QQP+ +S NN+ S P I D S
Sbjct: 33 FSVDSFLAHQQQPEFPVSNYGQNNSTINNLSSSTFHPDMLNSSAAPPIVHTVDSSQYVIF 92
Query: 64 --SNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE 121
S +K A + S N+SPT ++ + NN G +G + K +E
Sbjct: 93 RDSKKRKVEAQSTSSSKNVSPTTSTTTNTKQKNNLGRDKKGKNKEKEVEKA-------EE 145
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
VIHVRAKRGQATDSHS+AERVRREKIN +LRCLQDLVPGC+K+MGMAVML+ IINYV SL
Sbjct: 146 VIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSL 205
Query: 182 QNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYG--GPSYFHSA 239
QNQ+EFLSM+L+AAS YD N E ++++ T+ Q+ ++ +RE YG G Y S
Sbjct: 206 QNQVEFLSMELAAASCSYDLNLETESSKKAQVTSSAGTQETQKWLRERYGDLGCCY-QST 264
Query: 240 WSL 242
WS+
Sbjct: 265 WSI 267
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 117/153 (76%), Gaps = 2/153 (1%)
Query: 92 SVNNKGTGMQGLSGR-KRKRNN-ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINE 149
+V+ G+ ++ SGR KR +NN EK KEV++ RA+RGQATDSH+LAERVRR KINE
Sbjct: 116 AVSETGSKIKHSSGRGKRLKNNVTEEEEKAKEVVNARARRGQATDSHNLAERVRRGKINE 175
Query: 150 RLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTE 209
+LR LQ++VPGCYKTM MAVMLD IINYV+SLQ+Q+EFLS++L+AAS +YDFNSE+D E
Sbjct: 176 KLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEFLSLELTAASTFYDFNSEIDAFE 235
Query: 210 TMPGTNECDAQDMERMVREGYGGPSYFHSAWSL 242
TM + +A+++ + REG+GG S W L
Sbjct: 236 TMQRSRAYEAKELGKYKREGHGGVSLLQPTWHL 268
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 109/161 (67%), Gaps = 32/161 (19%)
Query: 26 FDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPA 85
F +H+Q QL M+FAD NIQS F ++SP PA
Sbjct: 54 FSNHRQQQLPMNFADVNIQS-------------------------------FFSVSP-PA 81
Query: 86 SGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRRE 145
+G S N + + +++++++++ +EKPKEVIHVRAKRGQATDSHSLAERVRRE
Sbjct: 82 VPTGTGSANIQKFLQKHEGKKRKRKDDQKDLEKPKEVIHVRAKRGQATDSHSLAERVRRE 141
Query: 146 KINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+INE+LRCLQDLVPGCYKTMGMAVMLDVIINYV+SLQNQIE
Sbjct: 142 RINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 182
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 125/193 (64%), Gaps = 14/193 (7%)
Query: 29 HQQPQLCMSFADN---NIQSEAL----VVPSIGLIADFSHDTSNGKKAAAHTVESFMNLS 81
HQQP+L +FA N + +S L VV S+ + H++ ++ +S
Sbjct: 47 HQQPELMGTFAYNLQSSFESNGLSSMPVVQSMPSSGNAFHESK--RRKVMEQSKSSSENI 104
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAER 141
+ ASGSGL +++ G+K + +++ +++KP EVIHVRA+RGQATD+HS+AER
Sbjct: 105 SSMASGSGLKEISSTKKKNNLGKGKKGRNSDKELLDKPDEVIHVRARRGQATDNHSIAER 164
Query: 142 VRREKINERLRCLQDLVPGCYKTM-----GMAVMLDVIINYVRSLQNQIEFLSMKLSAAS 196
VRREKI RLRCLQDLVPGCYK GMAVMLD IINYV SLQNQ+EFLS +L+AAS
Sbjct: 165 VRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINYVHSLQNQVEFLSRELAAAS 224
Query: 197 MYYDFNSELDTTE 209
++FNSE + +
Sbjct: 225 SLHNFNSETEAIK 237
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 93/115 (80%), Gaps = 3/115 (2%)
Query: 93 VNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLR 152
V+N G++G +K+KR ++ E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER+R
Sbjct: 107 VSNSKEGVEGTKSKKQKRGSKE--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMR 164
Query: 153 CLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
LQ+LVPGC K G A+MLD IINYV++LQNQ+EFLSMKL++ S + YDF S+LD
Sbjct: 165 TLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISPVVYDFGSDLD 219
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 114/193 (59%), Gaps = 28/193 (14%)
Query: 37 SFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGS-------- 88
SF D Q+ +P+I + D S N K E N + T +GS
Sbjct: 31 SFID---QNHLYPLPNISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSH 87
Query: 89 GLLSVNNKGT--------------GMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATD 134
G ++ N G G++G +K+KR ++ E P + IHVRA+RGQATD
Sbjct: 88 GPSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKE--EPPTDYIHVRARRGQATD 145
Query: 135 SHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
SHSLAERVRREKI+ER+R LQ+LVPGC K G A+MLD IINYV++LQ Q+EFLSMKL++
Sbjct: 146 SHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTS 205
Query: 195 AS-MYYDFNSELD 206
S + YDF S+LD
Sbjct: 206 ISPVVYDFGSDLD 218
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 93/135 (68%), Gaps = 9/135 (6%)
Query: 87 GSGLLSVNNKGTGMQGLSGRKRKRNNERVV--------EKPKEVIHVRAKRGQATDSHSL 138
GS ++ N QG +G+K K N++ V E P IHVRA+RGQATDSHSL
Sbjct: 118 GSSSMTSANSKNVTQGDNGKKNKSNSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSL 177
Query: 139 AERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-M 197
AERVRREKI+ER++ LQ LVPGC K G A+MLD IINYV+SLQNQ+EFLSMKL++ + M
Sbjct: 178 AERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPM 237
Query: 198 YYDFNSELDTTETMP 212
YYDF +LD P
Sbjct: 238 YYDFGMDLDALMVRP 252
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 83/110 (75%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
N T G +K+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ L
Sbjct: 342 NGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 401
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
QDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 402 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 451
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 83/110 (75%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
N T G +K+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ L
Sbjct: 342 NGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 401
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
QDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 402 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 451
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 83/110 (75%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
N T G +K+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ L
Sbjct: 233 NGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 292
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
QDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 293 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 342
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 89/121 (73%), Gaps = 9/121 (7%)
Query: 101 QGLSGRKRKRNNERVV--------EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLR 152
QG +G+K+K N++ V E P IHVRA+RGQATDSHSLAERVRREKI+ER++
Sbjct: 121 QGDNGKKKKINSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMK 180
Query: 153 CLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETM 211
LQ LVPGC K G A+MLD IINYV+SLQNQ+EFLSMKL++ + MYYDF +LD
Sbjct: 181 ILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDALMVR 240
Query: 212 P 212
P
Sbjct: 241 P 241
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
Query: 104 SGRKRKRN--NERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
SG K+N + + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 267 SGGDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGC 326
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G A+MLD IINYVRSLQ Q+EFLSMKLS+ + DF++E
Sbjct: 327 NKVTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDFSTE 369
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 83/109 (76%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
KG + K+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ
Sbjct: 357 KGGNNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 416
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
DLVPGC K G A+MLD IINYV+SLQ Q+EFLSMKL++ + DF+ E
Sbjct: 417 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIE 465
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 80/98 (81%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 367 KQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 426
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
A+MLD IINYV+SLQ Q+EFLSMKL++ + DF+ E
Sbjct: 427 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIE 464
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 2/100 (2%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
+ + N R E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 341 QNKANSRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 400
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
A+MLD IINYV+SLQ Q+EFLSMKL++ + DFN +DT
Sbjct: 401 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFN--MDT 438
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 79/101 (78%)
Query: 102 GLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
G S K+ ++ + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 381 GESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 440
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 441 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN 481
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 80/99 (80%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K+ ++N ++ E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 327 QKQNKDNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 386
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 387 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNME 425
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 83/103 (80%), Gaps = 3/103 (2%)
Query: 109 KRNNERVV--EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K ++E+ V E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K G
Sbjct: 165 KADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTT 208
A MLD IINYV+ LQNQ+EFLSMKL++ + M+YDF +LD T
Sbjct: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNT 267
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%), Gaps = 5/118 (4%)
Query: 86 SGSGLLSVNNKGTGMQGLSGRKR-KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRR 144
SG G + +N G G+K+ K ++ + E PK+ IHVRA+RG+ATDSHSLAERVRR
Sbjct: 241 SGKGKAAQSNSENG----GGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRR 296
Query: 145 EKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
EKI++R++ LQDLVPGC K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 297 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 354
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 78/98 (79%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K + N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 355 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 414
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMKL+A + +FN E
Sbjct: 415 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVE 452
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K NN + E PK+ IHVRA+RGQATDSHSLAERVRREKI ER++ LQDLVPGC K G A
Sbjct: 285 KSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKA 344
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFN 202
+MLD IINYV+SLQ Q+EFLSMKLS+ + DFN
Sbjct: 345 LMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFN 379
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K NN + E PK+ IHVRA+RGQATDSHSLAERVRREKI ER++ LQDLVPGC K G A
Sbjct: 285 KSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKA 344
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFN 202
+MLD IINYV+SLQ Q+EFLSMKLS+ + DFN
Sbjct: 345 LMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFN 379
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K+ + + + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 332 KQNKASTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 391
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
A+MLD IINYV+SLQ Q+EFLSMKL++ + D N LDT
Sbjct: 392 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDIN--LDT 430
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Query: 105 GRKRKRNN-ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+K+ ++ ++ E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC K
Sbjct: 243 GKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 302
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
+G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 303 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Query: 105 GRKRKRNN-ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+K+ ++ ++ E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC K
Sbjct: 243 GKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 302
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
+G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 303 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 105 GRKR-KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+K+ K + + E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC K
Sbjct: 259 GKKQGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 318
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
+G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 319 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 357
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 81/103 (78%)
Query: 102 GLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
G + +K+ ++ + E PK+ IHVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC
Sbjct: 330 GDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGC 389
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 390 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 432
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%), Gaps = 5/118 (4%)
Query: 86 SGSGLLSVNNKGTGMQGLSGRKR-KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRR 144
SG G + +N G G+K+ K ++ + E PK+ IHVRA+RG+ATDSHSLAERVRR
Sbjct: 243 SGKGKAAQSNSENG----GGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRR 298
Query: 145 EKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
EKI++R++ LQDLVPGC K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 299 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 356
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
Query: 105 GRK---RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
GRK ++ + E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC
Sbjct: 257 GRKQQGKESATKPPAEAPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGC 316
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFNS
Sbjct: 317 NKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNS 358
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 105 GRKRKRNN-ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+K+ ++ + E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC K
Sbjct: 231 GKKQGKDGASKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
+G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 329
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%), Gaps = 5/118 (4%)
Query: 86 SGSGLLSVNNKGTGMQGLSGRKR-KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRR 144
SG G + +N G G+K+ K ++ + E PK+ IHVRA+RG+ATDSHSLAERVRR
Sbjct: 38 SGKGKAAQSNSENG----GGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRR 93
Query: 145 EKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
EKI++R++ LQDLVPGC K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 94 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 151
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
Query: 105 GRKRKRNN--ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
G+K+ ++ ++ E PK+ IHVRA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC
Sbjct: 248 GKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCN 307
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 308 KVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 347
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 78/98 (79%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K+K++N E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 9 KQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 68
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMK++ + + N E
Sbjct: 69 KAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINME 106
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E P IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K G A+MLD IIN
Sbjct: 156 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 215
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
YV+SLQNQ+EFLSMKL++ + M+YD ++LDT P
Sbjct: 216 YVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVRP 252
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 77/95 (81%)
Query: 110 RNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
+ N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AV
Sbjct: 43 KENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 102
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
MLD IINYV+SLQ Q+EFLSMKL+A + +FN E
Sbjct: 103 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVE 137
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K+ + N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 236 KQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 295
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAA-SMYYDFN 202
A+MLD IINYV+SLQ+Q+EFLSMKL++ + DFN
Sbjct: 296 KALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFN 332
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 93/134 (69%), Gaps = 12/134 (8%)
Query: 85 ASGSGLLSVNNKGTGMQGLSGRKRKRNN--------ERVVEK---PKEVIHVRAKRGQAT 133
+ GS + SV +KGT + S + +K+ ER E+ P IHVRA+RGQAT
Sbjct: 84 SDGSCMTSVQSKGTKRETKSRKSQKKPKANESDEMKERTQEEEEAPVGYIHVRARRGQAT 143
Query: 134 DSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLS 193
DSHSLAERVRREKI+ER++ LQ LVPGC K G AVMLD IINYV+SLQNQ+EFLSMKL+
Sbjct: 144 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLSMKLA 203
Query: 194 AAS-MYYDFNSELD 206
S M Y+F +++
Sbjct: 204 TVSPMLYEFGLDIE 217
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
KR + ++V E+P +HVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K
Sbjct: 153 KRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVT 212
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
G A+MLD IINYV+SLQNQ+EFLSMKL++ + M+YDF ELD P
Sbjct: 213 GKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMELDAFMVRP 260
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E P IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K G A+MLD IIN
Sbjct: 139 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 198
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
YV+SLQNQ+EFLSMKL++ + M+YD ++LDT P
Sbjct: 199 YVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVRP 235
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 90/138 (65%), Gaps = 14/138 (10%)
Query: 68 KAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVR 126
+AA VE+ TP S NK +G QG G + + PKE IHVR
Sbjct: 326 EAAKDNVEAQQKGDQTPTS------TPNKTSGKQGKQG-------SQASDPPKEEYIHVR 372
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ Q+E
Sbjct: 373 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 432
Query: 187 FLSMKLSAASMYYDFNSE 204
FLSMKL+ + DFN E
Sbjct: 433 FLSMKLATVNPRLDFNIE 450
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 7/127 (5%)
Query: 105 GRKRKRNNERVV---EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
G KR R+++ V E+PK IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC
Sbjct: 97 GGKRGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGC 156
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNECDAQ 220
K G A++LD IINYV+SLQNQ+EFLSMK+++ S + Y F +DTT+ T++ Q
Sbjct: 157 DKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFG--MDTTDAF-STDDHTTQ 213
Query: 221 DMERMVR 227
+E M++
Sbjct: 214 KIEGMLQ 220
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 78/97 (80%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 322 QNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 381
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
A+MLD IINYV+SLQ Q+EFLSMKL++ + D + E
Sbjct: 382 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIE 418
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 78/97 (80%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
+ ++N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 355 QSKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 414
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
A+MLD IINYV+SLQ Q+EFLSMKL++ + D + E
Sbjct: 415 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIE 451
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Query: 83 TPASGSGLLSVNNKG-----TGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHS 137
TP S G KG + SG++ K+ ++ + +E IHVRA+RGQAT+SHS
Sbjct: 322 TPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHS 381
Query: 138 LAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASM 197
LAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ +
Sbjct: 382 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 441
Query: 198 YYDFNSE 204
DFN E
Sbjct: 442 RLDFNIE 448
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E P IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K G A+MLD IIN
Sbjct: 163 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIIN 222
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
YV+SLQNQ+EFLSMKL++ + M+YDF +LD P
Sbjct: 223 YVQSLQNQVEFLSMKLASVNPMFYDFGMDLDALMVRP 259
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 11/137 (8%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERL 151
S N+G G GR K +E E+PK IHVRA+RGQATDSHSLAERVRRE+I+ER+
Sbjct: 94 STKNRG----GKRGRSSKEVDEE--EEPKGYIHVRARRGQATDSHSLAERVRRERISERM 147
Query: 152 RCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTET 210
R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSMK+++ S + Y F +DTT+
Sbjct: 148 RVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFG--MDTTDA 205
Query: 211 MPGTNECDAQDMERMVR 227
+ + Q +E M++
Sbjct: 206 F--STDHTTQKIEGMLQ 220
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
++ + N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 198 RQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 257
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAA-SMYYDFN 202
A+MLD IINYV+SLQ+Q+EFLSMKL++ + DFN
Sbjct: 258 KALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFN 294
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK K N + VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +
Sbjct: 166 RKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVI 225
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLS 193
G A+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 226 GKALMLDEIINYVQSLQRQVEFLSMKLA 253
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 80/101 (79%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+G++ K++++ +E IHVRA+RGQAT+SHSLAERVRREKI+ER+R LQDLVPGC K
Sbjct: 320 AGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSK 379
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 380 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 420
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 105 GRKRKRNN-ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+K+ ++ + E PK+ IH RA+RG+ATDSHSLAERVRREKI++R++ LQDLVPGC K
Sbjct: 231 GKKQGKDGASKPPEPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
+G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 329
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 80/101 (79%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+G++ K++++ +E IHVRA+RGQAT+SHSLAERVRREKI+ER+R LQDLVPGC K
Sbjct: 320 AGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSK 379
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 380 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 420
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 3/113 (2%)
Query: 106 RKRKRNNERV--VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+K + N ++ ++ K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 237 KKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 296
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTN 215
G A+MLD IINYV+SLQ Q+EFLSMKLS+ + DFN + L + + P +N
Sbjct: 297 VTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSN 349
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 3/113 (2%)
Query: 106 RKRKRNNERV--VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+K + N ++ ++ K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 231 KKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 290
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTN 215
G A+MLD IINYV+SLQ Q+EFLSMKLS+ + DFN + L + + P +N
Sbjct: 291 VTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSN 343
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 85/132 (64%), Gaps = 11/132 (8%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K K N V +K IHVRA+RGQATDSHSLAERVRREKIN+R++ LQDLVP C K
Sbjct: 277 KKGKEKNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVT 336
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERM 225
G AVMLD IINYV+SLQ+Q+EFLSMKL+ + DFN + + M G+
Sbjct: 337 GKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKEMSGSFSSKGM----- 391
Query: 226 VREGYGGPSYFH 237
P+YFH
Sbjct: 392 ------SPTYFH 397
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 3/113 (2%)
Query: 106 RKRKRNNERV--VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+K + N ++ ++ K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 237 KKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 296
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTN 215
G A+MLD IINYV+SLQ Q+EFLSMKLS+ + DFN + L + + P +N
Sbjct: 297 VTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSN 349
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 11/137 (8%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERL 151
S N+G G GR K +E E+PK IHVRA+RGQATDSHSLAERVRRE+I+ER+
Sbjct: 84 STKNRG----GKRGRSSKEVDEE--EEPKGYIHVRARRGQATDSHSLAERVRRERISERM 137
Query: 152 RCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTET 210
R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSMK+++ S + Y F +DTT+
Sbjct: 138 RVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFG--MDTTDA 195
Query: 211 MPGTNECDAQDMERMVR 227
+ + Q +E M++
Sbjct: 196 F--STDHTTQKIEGMLQ 210
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 77/95 (81%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K K +++ E PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
A+MLD IINYV+SLQ Q+EFLSMKL+ + DF
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 75/88 (85%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K K N + VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +
Sbjct: 171 KKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVI 230
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLS 193
G A+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 231 GKALMLDEIINYVQSLQRQVEFLSMKLA 258
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 77/95 (81%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K K +++ E PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
A+MLD IINYV+SLQ Q+EFLSMKL+ + DF
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 99 GMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLV 158
G++ + +++ + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER+ LQDLV
Sbjct: 168 GVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLV 227
Query: 159 PGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS--MYYDFNSELDTTETMPG 213
PGC + G AVMLD IINYV+SLQ Q+EFLSMKL+ + M ++ N+ L T PG
Sbjct: 228 PGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAALSTEMIQPG 284
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Query: 99 GMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLV 158
G++ + +++ + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER+ LQDLV
Sbjct: 165 GVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLV 224
Query: 159 PGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS--MYYDFNSELDTTETMPG 213
PGC + G AVMLD IINYV+SLQ Q+EFLSMKL+ + M ++ N+ L T PG
Sbjct: 225 PGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPG 281
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 73/88 (82%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IIN
Sbjct: 361 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 420
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNSE 204
YV+SLQ Q+EFLSMKLS+ + + N E
Sbjct: 421 YVQSLQRQVEFLSMKLSSVNPRMEINME 448
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 74/85 (87%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K N ++VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A
Sbjct: 177 KGKNAKLVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKA 236
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLS 193
+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 237 LMLDEIINYVQSLQRQVEFLSMKLA 261
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 8/114 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
SV +K TG G G + + PKE IHVRA+RGQAT+SHSLAERVRREKI+ER
Sbjct: 380 SVPSKNTGKHGKQG-------AQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 432
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 433 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 486
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 80/101 (79%), Gaps = 4/101 (3%)
Query: 108 RKRNNERVVEK---PKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
RK N ++ +K PKE IH+RA+ GQAT+SHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 244 RKSNGKQTEDKSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 303
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
+G AVMLD IINYV+SLQ Q+EFLSMKLSA + DFN E
Sbjct: 304 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDFNIE 344
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
Query: 95 NKGTGMQGLSGRKRKRNNE--RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLR 152
NK + S K N++ V + E IHVRA+RGQATDSHSLAERVRREKI+ER++
Sbjct: 179 NKNNNRETTSAETSKDNSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMK 238
Query: 153 CLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETM 211
LQDLVPGC K G A MLD IINYV+SLQ Q+EFLSMKL+A + DFN EL T E
Sbjct: 239 YLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDELFTKEVF 298
Query: 212 P 212
P
Sbjct: 299 P 299
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
+ ++ K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A+MLD
Sbjct: 247 KSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDE 306
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTN 215
IINYV+SLQ Q+EFLSMKLS+ + DFN + L + + P +N
Sbjct: 307 IINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSN 349
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 78/97 (80%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+ + + + VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +
Sbjct: 138 KGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVV 197
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 198 GKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 234
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 78/97 (80%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+ + + + VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +
Sbjct: 138 KGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVV 197
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 198 GKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 234
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 78/97 (80%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+ + + + VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +
Sbjct: 138 KGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVV 197
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 198 GKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 234
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 8/114 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
SV +K TG G G + + PKE IHVRA+RGQAT+SHSLAERVRREKI+ER
Sbjct: 275 SVPSKNTGKHGKQG-------AQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 327
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 328 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 381
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
Query: 106 RKRKRNNERVV--EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+ K++ ++V E P IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K
Sbjct: 151 KAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDK 210
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
G A+MLD IINYV+SLQNQ+EFLSMKL++ + ++YDF + D P
Sbjct: 211 VTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMDFDALMVRP 260
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 78/97 (80%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+ + + + VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +
Sbjct: 138 KGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVV 197
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 198 GKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 234
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATDSHSLAERVRREKI ER++ LQDLVPGC K G A+MLD IIN
Sbjct: 291 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 350
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFN 202
YV+SLQ Q+EFLSMKLS+ + DFN
Sbjct: 351 YVQSLQRQVEFLSMKLSSVNDTRLDFN 377
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAER 141
P P SV + G G Q K N + VE P++ +HVRA+RGQATDSHSLAER
Sbjct: 152 PKPEQAGSDSSVED-GGGAQNQKPPPGKGKNAKPVEPPRDYVHVRARRGQATDSHSLAER 210
Query: 142 VRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLS 193
VRRE+I++R++ LQDLVPGC K +G A+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 211 VRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
Query: 95 NKGTGMQG-LSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLR 152
N G ++G S ++ K NN + E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+R
Sbjct: 231 NNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMR 290
Query: 153 CLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + +F+
Sbjct: 291 LLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 340
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 25/196 (12%)
Query: 59 FSHDTSNGKKAAAHTVESFMNLSPTPAS--------------GSGLLSVNNKGTGMQ--- 101
F H T+ A+ T ++ SP S G+ S +K + +
Sbjct: 27 FCHGTATADSASLETSSGVLDTSPRGTSSDDNKACRKHKEDSGASFSSARSKDSNSKESS 86
Query: 102 GLSGRKRKRNNERV-VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
SG KR R++++V E+PK IHVRA+RGQATD+HSLAERVRRE+I+ER+R LQ LVPG
Sbjct: 87 KRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPG 146
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNECDA 219
C K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F +D+++ ++
Sbjct: 147 CDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFG--MDSSDAF---SDLIT 201
Query: 220 QDMERMV-REGYGGPS 234
Q +E M E + PS
Sbjct: 202 QKIEGMAHHEAFAMPS 217
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G A+MLD I
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 175 INYVRSLQNQIEFLSMKLSAASMYYDFN 202
INYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 206 INYVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 25/196 (12%)
Query: 59 FSHDTSNGKKAAAHTVESFMNLSPTPAS--------------GSGLLSVNNKGTGMQ--- 101
F H T+ A+ T ++ SP S G+ S +K + +
Sbjct: 27 FCHGTATADSASLETSSGVLDTSPRGTSSGDNKACRKHKEDSGASFSSARSKDSNSKESS 86
Query: 102 GLSGRKRKRNNERV-VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
SG KR R++++V E+PK IHVRA+RGQATD+HSLAERVRRE+I+ER+R LQ LVPG
Sbjct: 87 KRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPG 146
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNECDA 219
C K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F +D+++ ++
Sbjct: 147 CDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFG--MDSSDAF---SDLIT 201
Query: 220 QDMERMV-REGYGGPS 234
Q +E M E + PS
Sbjct: 202 QKIEGMAHHEAFAMPS 217
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
Query: 91 LSVNNKGTGMQGLSGRKRKRNNERVV---EKPKEVIHVRAKRGQATDSHSLAERVRREKI 147
LS + + G R + E V E PK+ IHVRA+RGQATDSHSLAERVRREKI
Sbjct: 219 LSTDEERKPAAGEGWRGSGKGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKI 278
Query: 148 NERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
ER++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS + + ++
Sbjct: 279 GERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGAD 335
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 77/101 (76%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
SG+ K ++ +E IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 200 SGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 259
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 260 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 300
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 78/98 (79%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K+ +++ + E K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 273 KQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 332
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
A+MLD IINYV+SLQ Q+EFLSMKLS+ + D + E
Sbjct: 333 KALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIE 370
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 102 GLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
G S RK+ ++N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPG
Sbjct: 232 GKSSRKQAKDN---AGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPG 288
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
C K G AVMLD IINYV+SLQ Q+EFLSMKL++ + D N E
Sbjct: 289 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIE 332
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Query: 105 GRKRKRNNERV-VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G KR R+++ V E+PK IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K
Sbjct: 88 GGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDK 147
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 148 VTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDTD 191
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G A+MLD I
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 175 INYVRSLQNQIEFLSMKLSAASMYYDFN 202
INYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 206 INYVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 79/102 (77%), Gaps = 5/102 (4%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG++ K N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 240 SGKQTKDN----AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 295
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 296 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 337
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G A+MLD II
Sbjct: 149 VEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 208
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFN 202
NYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 209 NYVQSLQQQVEFLSMKLATVNPELDFS 235
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
Query: 95 NKGTGMQGLSGRKRKR--NNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERL 151
N G ++G K+ + NN + E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+
Sbjct: 236 NNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERM 295
Query: 152 RCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
R LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + +F+
Sbjct: 296 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFD 346
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
VE PK+ +HVRA+RGQATDSHSLAERVRREKI++R++ LQDLVPGC K +G A+MLD II
Sbjct: 147 VEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFN 202
NYV+SLQ Q+EFLSMKL+ + DF+
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 73/85 (85%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K N + VE P++ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A
Sbjct: 178 KGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKA 237
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLS 193
+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 238 LMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 73/85 (85%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K N + VE P++ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A
Sbjct: 178 KGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKA 237
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLS 193
+MLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 238 LMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 109 KRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
KR ++ + PK+ IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 286 KRQGKQSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 345
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 346 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE 382
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ R + + V E KE IH+RA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 235 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 294
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 295 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V E P IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC + G A++LD I
Sbjct: 135 VEEVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEI 194
Query: 175 INYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
INYV+SLQNQ+EFLSMKL++ + +++DF +LDT P
Sbjct: 195 INYVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTLLVRP 233
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 112 NERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
N + VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A+ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 172 DVIINYVRSLQNQIEFLSMKLS 193
D IINYV+SLQ Q+EFLSMKL+
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ R + + V E KE IH+RA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 225 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 284
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 285 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 325
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 112 NERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
N + VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A+ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 172 DVIINYVRSLQNQIEFLSMKLS 193
D IINYV+SLQ Q+EFLSMKL+
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 112 NERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
N + VE PK+ +HVRA+RGQATDSHSLAERVRRE+I++R++ LQDLVPGC K +G A+ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 172 DVIINYVRSLQNQIEFLSMKLS 193
D IINYV+SLQ Q+EFLSMKL+
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 109 KRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
K+ ++ + PK+ IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 285 KQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 344
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 345 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE 381
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 109 KRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
K+ ++ + PK+ IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 286 KQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 345
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 346 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE 382
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 85/112 (75%), Gaps = 5/112 (4%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
KR++++ E PK IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K G
Sbjct: 107 KREKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTG 166
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSE----LDTTETMPG 213
A++LD IINYV+SLQNQ+EFLSM++++ S + Y F + LD T+ + G
Sbjct: 167 KALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLLDQTQKIGG 218
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 79/102 (77%), Gaps = 5/102 (4%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG++ K N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 242 SGKQIKDN----AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 297
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 298 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 79/102 (77%), Gaps = 5/102 (4%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG++ K N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 242 SGKQIKDN----AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 297
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 298 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 109 KRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
K+ ++ + PK+ IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 286 KQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 345
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 346 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE 382
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N ++G K+ + N E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+R
Sbjct: 211 NTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRL 270
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + + + E
Sbjct: 271 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIE 321
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 77/105 (73%)
Query: 99 GMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLV 158
G + G+ K E P++ +HVRA+RGQATDSHSLAERVRREKI +++ LQDLV
Sbjct: 42 GRKQAKGKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLV 101
Query: 159 PGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
PGC K +G A+MLD IINYV+SLQ Q+EFLSMKLS + DF++
Sbjct: 102 PGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQLDFDT 146
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 78/100 (78%), Gaps = 5/100 (5%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG++ K N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 231 SGKQAKDN----AGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 286
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN
Sbjct: 287 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFN 326
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
Query: 110 RNNERV--VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
++N +V V+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 218 KDNSKVTEVQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 276
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMP 212
A MLD IINYV+SLQ Q+EFLSMKL+A + DFN + L ET P
Sbjct: 277 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFP 322
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG+ + + PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQ+LVPGC
Sbjct: 237 SGKSSGKQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCT 296
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 297 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 338
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 81/115 (70%), Gaps = 8/115 (6%)
Query: 91 LSVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINE 149
+S NK G K + + + PKE IHVRA+RGQAT+SHSLAERVRREKI+E
Sbjct: 330 ISTANKACG-------KNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISE 382
Query: 150 RLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
R++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFN E
Sbjct: 383 RMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 437
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 73/86 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 64 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQ 123
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSEL 205
SLQ QIEFLSMKL+A + D++ +L
Sbjct: 124 SLQRQIEFLSMKLAAVNPRLDYSYDL 149
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 72/85 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 71 EDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 130
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+A + DFN E
Sbjct: 131 SLQRQVEFLSMKLAAVNPTLDFNIE 155
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
+G++ K + E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC
Sbjct: 210 TGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCN 269
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
K G AVMLD IINYV+SLQ Q+EFLSMKL A++ D N +++
Sbjct: 270 KITGKAVMLDEIINYVQSLQQQVEFLSMKL--ATVNPDVNVDIE 311
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Query: 108 RKRNNERV---VEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
RK N ++ + PKE IH+RA+ GQAT+SHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 242 RKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 301
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
+G AVMLD IINYV+SLQ Q+EFLSMKLS + DFN E
Sbjct: 302 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIE 342
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 24/147 (16%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE----------VIHVRAKRGQATDSHSLAERVRR 144
NKG +G ++ ++ ++++E+ + IHVRA+RGQATDSHSLAERVRR
Sbjct: 140 NKGEVEEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRR 199
Query: 145 EKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNS 203
EKI+ER++ LQ LVPGC K G A+MLD IINYV+SLQNQ+EFLSMKL++ + +++DF
Sbjct: 200 EKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRM 259
Query: 204 ELD-------------TTETMPGTNEC 217
+LD T T+P +C
Sbjct: 260 DLDGLMIQPETTSLSSITPTLPAMAQC 286
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Query: 108 RKRNNERV---VEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
RK N ++ + PKE IH+RA+ GQAT+SHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 242 RKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 301
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
+G AVMLD IINYV+SLQ Q+EFLSMKLS + DFN E
Sbjct: 302 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIE 342
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 119 PKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINY
Sbjct: 310 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 369
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSE 204
V+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 370 VQSLQRQVEFLSMKLASVNPTLDFNIE 396
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 79/102 (77%), Gaps = 5/102 (4%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG++ K N PKE IHVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 350 SGKQIKDN----AGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 405
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
K G AVMLD IINYV+SLQ Q+EFLSMKL++ + DFN E
Sbjct: 406 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 447
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 14/109 (12%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSHSLAERVRREKI+ER++ LQ LVPGC K G A+MLD IINYV+SLQ
Sbjct: 146 IHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQ 205
Query: 183 NQIEFLSMKLSAAS-MYYDFNSELD-------------TTETMPGTNEC 217
NQ+EFLSMKL++ + +++DF +LD T T+P +C
Sbjct: 206 NQVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLPAMAQC 254
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 5/123 (4%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
V+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A MLD II
Sbjct: 137 VQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 195
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTNECDAQDMERMVREGYGGPS 234
NYV+SLQ Q+EFLSMKL+A + DFN + E P C A + PS
Sbjct: 196 NYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPA---CAANFPTIGMSSEMTNPS 252
Query: 235 YFH 237
Y H
Sbjct: 253 YLH 255
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
+G++ K + E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC
Sbjct: 57 TGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCN 116
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
K G AVMLD IINYV+SLQ Q+EFLSMKL A++ D N +++
Sbjct: 117 KITGKAVMLDEIINYVQSLQQQVEFLSMKL--ATVNPDVNVDIE 158
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K + + + P E +HVRA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 286 KNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVT 345
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + + DFN E
Sbjct: 346 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNME 384
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
Query: 110 RNNERV--VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
++N +V V+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 221 KDNSKVTEVQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 279
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
A MLD IINYV+SLQ Q+EFLSMKL+A + DFN
Sbjct: 280 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 314
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 80/114 (70%), Gaps = 8/114 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
S +K G QG G ++PKE IHVRA+RGQAT+SHSLAERVRREKI+ER
Sbjct: 123 STTSKDAGKQGKQGSLGS-------DQPKEEYIHVRARRGQATNSHSLAERVRREKISER 175
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 176 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 229
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 8/112 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
S NKGTG G + + + PKE IHVRA+RGQAT+SHSLAERVRREKI+ER
Sbjct: 342 STANKGTGKHG-------KQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 394
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
++ LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N
Sbjct: 395 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDIN 446
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 8/112 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
S NKGTG G + + + PKE IHVRA+RGQAT+SHSLAERVRREKI+ER
Sbjct: 298 STANKGTGKHG-------KQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 350
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
++ LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N
Sbjct: 351 MKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDIN 402
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 5/123 (4%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
V+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A MLD II
Sbjct: 248 VQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 306
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMPGTNECDAQDMERMVREGYGGPS 234
NYV+SLQ Q+EFLSMKL+A + DFN + E P C A + PS
Sbjct: 307 NYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPA---CAANFPTIGMSSEMTNPS 363
Query: 235 YFH 237
Y H
Sbjct: 364 YLH 366
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 109 KRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
K +++ V PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 56 KASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 115
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
AVMLD IINYV+SLQ QIEFLSMKL+A + D+
Sbjct: 116 AVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDY 149
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K+K+++ E KE IHVRA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC K
Sbjct: 212 KQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKT 271
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + +FN E
Sbjct: 272 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVE 310
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Query: 105 GRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
G+K+ + E+PK IHVRA+RGQATDSHSL+ERVRRE+I+ER+R LQ LVPGC K
Sbjct: 85 GKKQDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKV 144
Query: 165 MGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSE 204
G A++LD IINYVRSLQNQ+EFLSM++++ S + Y F E
Sbjct: 145 TGKALILDEIINYVRSLQNQVEFLSMRIASLSPVVYGFGME 185
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 110 RNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
+ N + EKP + IHVRA+RGQATDSHSLAERVRREKI+ER+ LQDLVPGC K G A
Sbjct: 180 KQNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAG 238
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
MLD IINYV+SLQ Q+EFLSMKL+A + DF+
Sbjct: 239 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFS 271
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ + + + E KE IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 235 GKSKGKGAKETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 294
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 295 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IH+RA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ
Sbjct: 170 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 229
Query: 183 NQIEFLSMKLSAASMYYDFNSE 204
QIEFLSMKLSA + DFN E
Sbjct: 230 CQIEFLSMKLSAVNPVLDFNLE 251
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N ++G K ++N E PKE IHVRA+RGQAT+SHSLAERVRREKI+ER+R
Sbjct: 234 NMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRL 293
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + + + E
Sbjct: 294 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIE 344
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 88/141 (62%), Gaps = 8/141 (5%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G K + + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K
Sbjct: 118 GNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 177
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMP-GTNECDAQDM 222
+G A++LD IINY++SLQ Q+EFLSMKL A + + N +D + GT D M
Sbjct: 178 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGFPSKDVGTQPFDIAGM 237
Query: 223 ------ERMVREGYGGPSYFH 237
R +G P + H
Sbjct: 238 VFGSQAARGYAQGSSPPGWLH 258
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 112 NERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVM
Sbjct: 2 NSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 61
Query: 171 LDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
LD IINYV+SLQ Q+EFLSMKL+A + D N
Sbjct: 62 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDIN 93
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IH+RA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ
Sbjct: 221 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 280
Query: 183 NQIEFLSMKLSAASMYYDFNSE 204
QIEFLSMKLSA + DFN E
Sbjct: 281 CQIEFLSMKLSAVNPVLDFNLE 302
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
Query: 94 NNKGTGMQGLS--GRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERL 151
N TG++ S G K + + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER+
Sbjct: 136 NGSKTGIEASSSGGGKSAEKSSQPPEPPKDYIHVRARRGQATDSHSLAERARREKISERM 195
Query: 152 RCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKL----SAASMYYDFNSELDT 207
+ LQDLVPGC K +G A++LD IINY++SLQ Q+EFLSMKL S + + D
Sbjct: 196 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVNPAINCFPSKDV 255
Query: 208 TETMPGTNECDAQDMERMVREGYGGPSYFHSAW 240
+ P T E A G+ H W
Sbjct: 256 NQLAPTTFEAAAMMFASQSARGFEPAPQPHPEW 288
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ + + E KE IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 232 GKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 292 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 332
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 111 NNERVVEKP-KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
N + V +P K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AV
Sbjct: 224 NGKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAV 283
Query: 170 MLDVIINYVRSLQNQIEFLSMKLS 193
MLD IINYV+SLQ Q+EFLSMKLS
Sbjct: 284 MLDEIINYVQSLQRQVEFLSMKLS 307
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 105 GRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
GR + + + EK ++ IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 222 GRSKGKGAKEGSEK-EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 280
Query: 165 MGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 281 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 320
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 82/122 (67%), Gaps = 15/122 (12%)
Query: 82 PTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKP-KEVIHVRAKRGQATDSHSLAE 140
P PA SG L N KG + V E P K+ IHVRA+RGQATDSHSLAE
Sbjct: 2 PVPAV-SGELGGNGKG-------------KEKEVAEDPHKDYIHVRARRGQATDSHSLAE 47
Query: 141 RVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYD 200
RVRREKI+ER++ LQDLVP C K G AVMLD IINYV+SLQ Q+EFLSMKLS + +
Sbjct: 48 RVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQME 107
Query: 201 FN 202
F+
Sbjct: 108 FD 109
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 5/112 (4%)
Query: 110 RNNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
+ N +V + K + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 234
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMPGTNECDA 219
MLD IINYV+SLQ Q+EFLSMKL+ + DFN +L E P CDA
Sbjct: 235 GMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPN---CDA 283
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 5/112 (4%)
Query: 110 RNNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
+ N +V + K + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 234
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMPGTNECDA 219
MLD IINYV+SLQ Q+EFLSMKL+ + DFN +L E P CDA
Sbjct: 235 GMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPN---CDA 283
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDL+PGC K G A MLD IIN
Sbjct: 185 QKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIIN 243
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMP 212
YV+SLQ Q+EFLSMKL+A + DFN EL E P
Sbjct: 244 YVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFP 280
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IH+RA+RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ
Sbjct: 166 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 225
Query: 183 NQIEFLSMKLSAASMYYDFNSE 204
QIEFLSMKLSA + DFN E
Sbjct: 226 CQIEFLSMKLSAVNPVLDFNLE 247
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 9/136 (6%)
Query: 67 KKAAAHTVESFMNLSPTPASGSGL-------LSVNNKGTGMQGLSGRKRKRNNERVVEKP 119
++A VES S T A G S + KG G + SG+ K++ + E P
Sbjct: 63 RQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSESGKGEG-ESCSGKPAKQSGKPPSEPP 121
Query: 120 KE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 181
Query: 179 RSLQNQIEFLSMKLSA 194
+SLQ Q+EFLSMKL A
Sbjct: 182 QSLQRQVEFLSMKLEA 197
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 7/108 (6%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ R + + V E KE IH+RA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 236 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 295
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
G AVMLD IINYV+SLQ Q+EFLSMKL+ N LD E +
Sbjct: 296 VTGKAVMLDEIINYVQSLQRQVEFLSMKLAT------VNPRLDNIEGL 337
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 75/97 (77%), Gaps = 6/97 (6%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IIN
Sbjct: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPG 213
Y++SLQ Q+EFLSMKL A NS ++ T + G
Sbjct: 199 YIQSLQRQVEFLSMKLEA------VNSRMNITPGIEG 229
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N G ++G K+ +++ + E PKE HVRA+RGQAT+SHSLAERVRREKI+ER+R
Sbjct: 132 NPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRM 191
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + + E
Sbjct: 192 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQIDVE 242
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+G+ + + + EK ++ IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 221 TGKSKGKGAKESSEK-EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 279
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 280 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 320
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 80/109 (73%), Gaps = 7/109 (6%)
Query: 112 NERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N ++ E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++
Sbjct: 132 NSKISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 191
Query: 171 LDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDA 219
LD IINY++SLQ Q+EFLSMKL A NS + T+ G + DA
Sbjct: 192 LDEIINYIQSLQRQVEFLSMKLEA------VNSRMGMNPTVEGFHPKDA 234
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDL+PGC K G A MLD IIN
Sbjct: 185 QKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIIN 243
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMP 212
YV+SLQ Q+EFLSMKL+A + DFN EL E P
Sbjct: 244 YVQSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFP 280
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 76/97 (78%)
Query: 107 KRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
K ++ + E P++ +HVRA+RGQATDSHSLAERVRREKI +++ LQDLVPGC K +G
Sbjct: 159 KSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIG 218
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
A+MLD IINYV+SLQ Q+EFLSMKL+ + DF++
Sbjct: 219 KALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFST 255
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Query: 103 LSGRKRKRNNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
+ G K + + E PK + IHVRA+RGQATDSHSLAER RREKI+ER++ LQDL PGC
Sbjct: 91 VGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGC 150
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPG 213
K +G A++LD IINY++SLQ Q+EFLSMKL A NS ++T T+ G
Sbjct: 151 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA------VNSRMNTNPTIDG 196
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 77/100 (77%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
+GT G + + +K+ + K + IHVRA+RGQATDSHSLAERVRRE+I+ER++ LQ
Sbjct: 103 EGTARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQ 162
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAA 195
+LVPGC K MG A LD IINYV+SLQ Q+EFLSMKL+AA
Sbjct: 163 ELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAA 202
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 14/117 (11%)
Query: 117 EKP---KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
EKP K+ IHVRA+RGQATDSHSLAERVRRE+I+ER++ LQ LVPGC K G A+MLD
Sbjct: 70 EKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDE 129
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGY 230
IINYV+SLQ Q+EFLSMKL+ + DF+S MP ++DM M Y
Sbjct: 130 IINYVQSLQRQVEFLSMKLATMNPQLDFDSHY-----MP------SKDMSHMPVPAY 175
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
V+KP + IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K G A MLD II
Sbjct: 241 VQKP-DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEII 299
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMP 212
NYV+SLQ Q+EFLSMKL+A + DFN +L E P
Sbjct: 300 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFP 337
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 89/124 (71%), Gaps = 15/124 (12%)
Query: 98 TGMQGLSGRKRKR-----NNERVVEKPKEV---------IHVRAKRGQATDSHSLAERVR 143
G++GL +K +R +++ V +K KE IHVRA+RGQATDSHSLAERVR
Sbjct: 139 VGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVR 198
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFN 202
REKI+ER++ LQ LVPGC K G A+MLD II+YV+SLQNQ+EFLSMKL++ S + Y+F
Sbjct: 199 REKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFG 258
Query: 203 SELD 206
+D
Sbjct: 259 PGID 262
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+ + D N E
Sbjct: 303 SLQRQVEFLSMKLATVNPRLDLNIE 327
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+ + D N E
Sbjct: 303 SLQRQVEFLSMKLATVNPRLDLNIE 327
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E P IHVRA+RGQATDSHSLAERVRRE+I+ER++ LQ LVPGC K G A+MLD IIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
YV+SLQNQ+EFLSMKL++ + + YDF + D P
Sbjct: 226 YVQSLQNQVEFLSMKLASVNPLLYDFGMDRDAFMVRP 262
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 70/87 (80%), Gaps = 4/87 (4%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELD 206
SLQ Q+EFLSMKLS D ELD
Sbjct: 333 SLQCQVEFLSMKLST----VDPRRELD 355
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 4/88 (4%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDT 207
SLQ Q+EFLSMKLS D ELD
Sbjct: 313 SLQCQVEFLSMKLST----VDPRRELDV 336
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+N + EKP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A M
Sbjct: 172 SNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGM 230
Query: 171 LDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
LD IINYV+SLQ Q+EFLSMKL+A + D +
Sbjct: 231 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDLS 262
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N ++G K+ ++N + E PK+ IHVRA+RGQAT+SHSLAERVRREKI+ER+R
Sbjct: 209 NCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRM 268
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS--MYYD 200
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + +Y D
Sbjct: 269 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELYND 317
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
V+KP + IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K G A MLD II
Sbjct: 241 VQKP-DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEII 299
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTETMP 212
NYV+SLQ Q+EFLSMKL+A + DFN +L E P
Sbjct: 300 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFP 337
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 119 PKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINY
Sbjct: 69 PKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 128
Query: 178 VRSLQNQIEFLSMKLSA 194
V+SLQ QIEFLSMKL+A
Sbjct: 129 VQSLQRQIEFLSMKLAA 145
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINYV+
Sbjct: 120 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 179
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS S + NS+LD + +
Sbjct: 180 SLQRQVEFLSMKLSTIS--PELNSDLDLQDIL 209
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 117 QDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQ 176
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
+LQ Q+EFLSMKL+A + D N E
Sbjct: 177 ALQCQVEFLSMKLAAVNPQLDCNVE 201
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Query: 117 EKP---KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
EKP K+ IHVRA+RGQATDSHSLAERVRRE+I+ER++ LQ LVPGC K G A+MLD
Sbjct: 100 EKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDE 159
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
IINYV+SLQ Q+EFLSMKL+ + DF+S
Sbjct: 160 IINYVQSLQRQVEFLSMKLATMNPQLDFDS 189
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K ++N++ E+PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +
Sbjct: 152 KTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 211
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 212 GKALVLDEIINYIQSLQRQVEFLSMKLEA 240
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 87/131 (66%), Gaps = 8/131 (6%)
Query: 105 GRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
G K+ ++ E P+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K
Sbjct: 87 GGKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKV 146
Query: 165 MGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNECDAQDME 223
G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F + D +Q ME
Sbjct: 147 TGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGIDSDAFSD-------HSQKME 199
Query: 224 RMVREGYGGPS 234
M E P+
Sbjct: 200 GMFHEAVAIPA 210
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
S R K NN ++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K
Sbjct: 420 SPRAHKENNSSKDHAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSK 479
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
G AVMLD IINYV+SLQ Q+E LSMKL++
Sbjct: 480 VTGKAVMLDEIINYVQSLQRQVENLSMKLAS 510
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IHVRAKRGQAT+SHSLAERVRRE+I+ER++ LQDLVPGC K G AVMLD II
Sbjct: 237 EAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEII 296
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++Y + N +++
Sbjct: 297 NYVQSLQRQVEFLSMKL--ATVYPEMNVQIE 325
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINYV+
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS S + NS+LD + +
Sbjct: 683 SLQRQVEFLSMKLSTIS--PELNSDLDLQDIL 712
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINYV+
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS S + NS+LD + +
Sbjct: 683 SLQRQVEFLSMKLSTIS--PELNSDLDLQDIL 712
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINYV+
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS S + NS+LD + +
Sbjct: 683 SLQRQVEFLSMKLSTIS--PELNSDLDLQDIL 712
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 69/88 (78%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATD HSLAERVRREKI ER++ LQDLVPGC K G AVM+D IIN
Sbjct: 210 EPPKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIIN 269
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNSE 204
YV+SLQ Q+EFLSMKL A + N E
Sbjct: 270 YVQSLQCQVEFLSMKLEAVNPKLACNME 297
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%), Gaps = 15/124 (12%)
Query: 98 TGMQGLSGRKRKR-----NNERVVEKPKEV---------IHVRAKRGQATDSHSLAERVR 143
G++GL +K +R +++ V +K KE IHVRA+RGQATDSHSLAERVR
Sbjct: 139 VGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVR 198
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFN 202
REKI+ER++ LQ LVPGC K G A+MLD II+YV+SLQNQ+EFLSMKL++ + + Y+F
Sbjct: 199 REKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLNPLMYEFG 258
Query: 203 SELD 206
+D
Sbjct: 259 PGID 262
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Query: 117 EKP---KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
EKP K+ IHVRA+RGQATDSHSLAERVRR++I+ER++ LQ LVPGC K G A+MLD
Sbjct: 236 EKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDE 295
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
IINYV+SLQ Q+EFLSMKLS + D + + ++ M
Sbjct: 296 IINYVQSLQRQVEFLSMKLSTMNPQLDLDGQYKPSKDM 333
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 9/123 (7%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEK-------PKEVIHVRAKRGQATDSHSLAERVRR 144
S ++K + G S R +K + E V EK PK IHVRA+RGQATDSHSLAERVRR
Sbjct: 84 SAHSKDSCKDGKSRRGKKASKE-VEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRR 142
Query: 145 EKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNS 203
E+I+ER+R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F
Sbjct: 143 ERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGM 202
Query: 204 ELD 206
+ D
Sbjct: 203 DSD 205
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 104 SGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
SG+ +++ + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC
Sbjct: 124 SGKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 183
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
K +G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 184 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 215
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Query: 99 GMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDL 157
G + SG+ +++ + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDL
Sbjct: 106 GRENSSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDL 165
Query: 158 VPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
VPGC K +G A++LD IINY++SLQ Q EFLSMKL A
Sbjct: 166 VPGCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEA 202
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
KP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A MLD IINY
Sbjct: 137 KP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 195
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFN 202
V+SLQ Q+EFLSMKL+A + DFN
Sbjct: 196 VQSLQRQVEFLSMKLAAVNPRLDFN 220
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A+MLD IINYV+
Sbjct: 28 QDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQ 87
Query: 180 SLQNQIEFLSMKLSAA--SMYYD 200
SLQ Q+EFLSMKL+A ++Y D
Sbjct: 88 SLQRQVEFLSMKLAAVKPALYTD 110
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 116 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 175
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
V+SLQ Q+EFLSMKLSA S + N +LD + +
Sbjct: 176 VQSLQRQVEFLSMKLSAIS--PELNCDLDLQDIL 207
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
+E IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 624 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 683
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+ + D N E
Sbjct: 684 SLQRQVEFLSMKLATVNPRLDLNIE 708
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 29/186 (15%)
Query: 62 DTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE 121
+ SNGK+ M +S TP G + ++G K ++ + ++
Sbjct: 92 NASNGKR---------MKISRTPDENGG----SKAELEASSVAGEKPAEESKPAEQSKQD 138
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++SL
Sbjct: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
Query: 182 QNQIEFLSMKLSAASMYYDFNSELD-TTETMP----GTNECDAQDM---ERMVREGYGG- 232
Q Q+EFLSMKL A NS ++ T E P G DA M + RE G
Sbjct: 199 QRQVEFLSMKLEA------VNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGS 252
Query: 233 -PSYFH 237
P + H
Sbjct: 253 QPEWLH 258
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 29/186 (15%)
Query: 62 DTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE 121
+ SNGK+ M +S TP G + ++G K ++ + ++
Sbjct: 107 NASNGKR---------MKISRTPDENGG----SKAELEASSVAGEKPAEESKPAEQSKQD 153
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++SL
Sbjct: 154 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 213
Query: 182 QNQIEFLSMKLSAASMYYDFNSELD-TTETMP----GTNECDAQDM---ERMVREGYGG- 232
Q Q+EFLSMKL A NS ++ T E P G DA M + RE G
Sbjct: 214 QRQVEFLSMKLEA------VNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGS 267
Query: 233 -PSYFH 237
P + H
Sbjct: 268 QPEWLH 273
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++S
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 181 LQNQIEFLSMKLSAASMYYDFNSELD 206
LQ+Q+EFLSMKL A + ++ N +D
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTID 172
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K ++N++ E+PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +
Sbjct: 28 KTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 87
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 88 GKALVLDEIINYIQSLQRQVEFLSMKLEA 116
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 79/121 (65%), Gaps = 14/121 (11%)
Query: 98 TGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDL 157
G G G + + + E PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDL
Sbjct: 118 AGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 177
Query: 158 VPGCYK--------------TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
VPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS + DF+
Sbjct: 178 VPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDV 237
Query: 204 E 204
+
Sbjct: 238 D 238
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 82/104 (78%), Gaps = 3/104 (2%)
Query: 111 NNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
++R + PK+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AV
Sbjct: 49 TSKRPQDFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 108
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASM-YYDFNSELDTTETMP 212
MLD IINYV+SLQ Q+EFLSMKL+ ++ D++ +L + E MP
Sbjct: 109 MLDEIINYVQSLQRQVEFLSMKLATVNVPRLDYSYDLLSKE-MP 151
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 70/84 (83%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 163 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 222
Query: 181 LQNQIEFLSMKLSAASMYYDFNSE 204
LQ Q+EFLSMKL+ + +FNS+
Sbjct: 223 LQRQVEFLSMKLATVNPALEFNSD 246
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 85/125 (68%), Gaps = 8/125 (6%)
Query: 90 LLSVNNKGTGMQGLSGRKRKRNNERVVEKP-------KEVIHVRAKRGQATDSHSLAERV 142
L S +K Q ++ KR N+ EK K IHVRA+RGQATDSHSLAERV
Sbjct: 80 LSSAQSKDCKQQESKSKRGKRPNKETEEKSTTEDEATKGYIHVRARRGQATDSHSLAERV 139
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDF 201
RRE+I+ER+R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F
Sbjct: 140 RRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGF 199
Query: 202 NSELD 206
+ D
Sbjct: 200 GLDSD 204
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Query: 59 FSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNK-GTGMQGLSGRKRKRNNERVVE 117
F + TS + + ++E + SG G S++++ GTG + KR+ N+E+ +
Sbjct: 52 FYNPTSGTELSRNMSMEKCLKGGKRKGSGEGSSSMHSQEGTG----AVSKREVNSEKAGD 107
Query: 118 KP---KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
++ +H+RAKRGQAT++HSLAER RREKINER++ LQDLVPGC K G A+MLD I
Sbjct: 108 AESNREDYVHIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEI 167
Query: 175 INYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
INYV+SLQ Q+EFLSMKLSA S + N +LD + +
Sbjct: 168 INYVQSLQRQVEFLSMKLSAVSP--ELNCDLDFQDIL 202
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N G + K ++N E KE IHVRAKRGQAT+SHSLAERVRRE+I+ER+R
Sbjct: 203 NSGPSSRSRQAVKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRL 262
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLS 193
LQ+LVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+
Sbjct: 263 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 302
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 112 NERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N + E PK+ IHVRA+RGQATDSHSLAER RRE+I+ER++ LQDLVPGC K +G A++
Sbjct: 79 NSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALV 138
Query: 171 LDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
LD IINY++SLQ Q+EFLSMKL A + + N
Sbjct: 139 LDEIINYIQSLQQQVEFLSMKLEAVNSRINVN 170
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P IHVRA+RGQATDSHSLAERVRREKI++R+ LQ LVPGC K G A++LD IIN
Sbjct: 130 DPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIIN 189
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMP 212
YV+SLQNQ+EFLSMKL++ + M++D +LDT P
Sbjct: 190 YVQSLQNQVEFLSMKLASVNPMFFDSAMDLDTLMVRP 226
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 74/95 (77%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
RK+ + + IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G
Sbjct: 133 RKKPEAAAAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGK 192
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
A MLD IINYV+SLQ Q+EFLSMK++AA+ +FN
Sbjct: 193 AGMLDEIINYVQSLQKQVEFLSMKIAAANPVVNFN 227
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
Query: 92 SVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINER 150
S + KG G + SG+ +++ + E PK+ IHVRA+RGQATDSHSLAER RREKI+ER
Sbjct: 104 SESGKGEG-ETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISER 162
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
++ LQD+VPGC K +G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 163 MKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 206
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 72/94 (76%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
+ R+ +V+ + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVP C K G
Sbjct: 8 KSRSKSQVMHPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGK 67
Query: 168 AVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
AVMLD IINYV+SLQ QIEFLSMKL+A D
Sbjct: 68 AVMLDEIINYVQSLQRQIEFLSMKLAAVDPRLDI 101
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 91 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSEL-------DTTETMPGTN 215
V+SLQ QIEFLSMKLSA + + +L D + PG N
Sbjct: 151 VQSLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASSAFPGYN 195
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 68/79 (86%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 127 IEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NY++SLQ Q+EFLSMKL A
Sbjct: 187 NYIQSLQRQVEFLSMKLEA 205
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 69/83 (83%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVML+ IINYV+
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 180 SLQNQIEFLSMKLSAASMYYDFN 202
SLQ QIEFLSMKL+A D N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 7/103 (6%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
NN + ++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVM
Sbjct: 40 NNRNKILSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVM 99
Query: 171 LDVIINYVRSLQNQIEFLSMKL-------SAASMYYDFNSELD 206
LD IINYV+SLQ Q+E LSMKL S A + Y+F + L+
Sbjct: 100 LDEIINYVQSLQRQVESLSMKLASVNPGPSTARLDYNFETALN 142
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSEL-------DTTETMPGTN 215
V+SLQ QIEFLSMKLSA + + +L D + PG N
Sbjct: 177 VQSLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASSAFPGYN 221
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IH+RA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC K G AVMLD II
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 256
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++ + N ++D
Sbjct: 257 NYVQSLQQQVEFLSMKL--ATVNPEINIDID 285
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSEL-------DTTETMPGTN 215
V+SLQ QIEFLSMKLSA + + +L D + PG N
Sbjct: 177 VQSLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASSAFPGYN 221
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IH+RA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC K G AVMLD II
Sbjct: 145 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 204
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++ + N ++D
Sbjct: 205 NYVQSLQQQVEFLSMKL--ATVNPEINIDID 233
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IH+RA+RGQAT+SHSLAERVRREKI+ER+R LQ+LVPGC K G AVMLD II
Sbjct: 195 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 254
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++ + N ++D
Sbjct: 255 NYVQSLQQQVEFLSMKL--ATVNPEINIDID 283
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 89/134 (66%), Gaps = 10/134 (7%)
Query: 74 VESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQA 132
VE F P SGS +K + ++ +N E +PKE IH+RA+RGQA
Sbjct: 3 VEEFQE---DPQSGSDQSQKKHKNDQSKETMNKESSQNEE----EPKEKYIHMRARRGQA 55
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKL 192
T+SHSLAERVRREKI+ER+R LQ+LVPGC K G A MLD IINY++SLQ Q+EFLSMKL
Sbjct: 56 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKL 115
Query: 193 SAASMYYDFNSELD 206
A++ D N ++D
Sbjct: 116 --ATVNPDINIDID 127
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 121 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 180
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSEL-------DTTETMPGTN 215
V+SLQ QIEFLSMKLSA + + +L D + PG N
Sbjct: 181 VQSLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASSAFPGYN 225
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 68/79 (86%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NY++SLQ Q+EFLSMKL A
Sbjct: 187 NYIQSLQRQVEFLSMKLEA 205
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 68/79 (86%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NY++SLQ Q+EFLSMKL A
Sbjct: 187 NYIQSLQRQVEFLSMKLEA 205
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 8/129 (6%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHS+AER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 110 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEII 169
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQ-DMERMVREGYGGPS 234
NY++SLQ+Q+EFLSMKL A + + N T E P + D+ ++ E +
Sbjct: 170 NYIQSLQHQVEFLSMKLEAVNSRANMNP---TNEGFPSKDVVTQPFDIAGVIYESHAARG 226
Query: 235 YF---HSAW 240
Y H W
Sbjct: 227 YAQGSHPGW 235
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 67/77 (87%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 91 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 178 VRSLQNQIEFLSMKLSA 194
V+SLQ QIEFLSMKLSA
Sbjct: 151 VQSLQRQIEFLSMKLSA 167
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 67/77 (87%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K G A+MLD IINY
Sbjct: 117 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 178 VRSLQNQIEFLSMKLSA 194
V+SLQ QIEFLSMKLSA
Sbjct: 177 VQSLQRQIEFLSMKLSA 193
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 79/106 (74%), Gaps = 7/106 (6%)
Query: 106 RKRKRNNERVV----EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
R RK E+ E K IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC
Sbjct: 108 RPRKETEEKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 167
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDF--NSE 204
K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F NSE
Sbjct: 168 DKVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGTNSE 213
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 88 SGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREK 146
SG L N+ S K N + E PK+ IHVRA+RGQATDSHSLAER RREK
Sbjct: 100 SGNLDENHDSKSEAEPSSGKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREK 159
Query: 147 INERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS 196
I+ER++ LQDLVPGC K +G A++LD IINY++SLQ Q+EFLSMKL A +
Sbjct: 160 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 209
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
Query: 101 QGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
+G + + + +NE + P +HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPG
Sbjct: 179 RGSTKKSKNESNEDAEKLP--YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 236
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE-LDTTETMP 212
C K G A++LD IIN+V+SLQ Q+EFLSM+L+A + DFN E + TE P
Sbjct: 237 CNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIESILATENEP 289
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Query: 108 RKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMG 166
+K NN++ E K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G
Sbjct: 370 QKENNQKAKEFSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTG 429
Query: 167 MAVMLDVIINYVRSLQNQIEFLSMKLSA 194
AVMLD IINYV+SLQ Q+E LSMK+++
Sbjct: 430 KAVMLDEIINYVQSLQRQVESLSMKVAS 457
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
SG+ ++N + ++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K
Sbjct: 130 SGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 189
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
+G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 190 VIGKALVLDEIINYIQSLQRQVEFLSMKLEA 220
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 70/82 (85%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ +FN
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN 241
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 70/82 (85%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ +FN
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN 241
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD II
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 176 NYVRSLQNQIEFLSMKLSAASMY 198
NY++SLQ+Q+EFLSMKL A + +
Sbjct: 179 NYIQSLQHQVEFLSMKLEAVNSH 201
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Query: 114 RVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
+ E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD
Sbjct: 132 KPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 191
Query: 173 VIINYVRSLQNQIEFLSMKLSA 194
IINY++SLQ Q+EFLSMKL A
Sbjct: 192 EIINYIQSLQRQVEFLSMKLEA 213
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 76/109 (69%), Gaps = 6/109 (5%)
Query: 92 SVNNKGT-----GMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRRE 145
S NNKG+ S K N E PK+ IHVRA+RGQATDSHSLAER RRE
Sbjct: 87 SSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARRE 146
Query: 146 KINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
KI+ER++ LQDLVPGC K +G A +LD IINY++SLQ Q+EFLSMKL A
Sbjct: 147 KISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEA 195
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 70/82 (85%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ +FN
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN 241
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IH+RA+RGQAT+SHSLAERVRREKI+ER+R LQ+L PGC K G AVMLD II
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEII 256
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++ + N ++D
Sbjct: 257 NYVQSLQQQVEFLSMKL--ATVNPEINIDID 285
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Query: 112 NERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N + + PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++
Sbjct: 68 NPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 127
Query: 171 LDVIINYVRSLQNQIEFLSMKLSA 194
LD IINY++SLQ Q+EFLSMKL A
Sbjct: 128 LDEIINYIQSLQRQVEFLSMKLEA 151
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Query: 111 NNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
N +V PK + IHVRA+RGQATDSHSLAER RREKI+++++ LQDLVPGC K G A
Sbjct: 175 NASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAG 234
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
MLD IINYV+SLQ Q+EFLS+KL+ + DFN LDT
Sbjct: 235 MLDEIINYVQSLQRQVEFLSLKLATMNPRTDFN--LDT 270
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 115 VVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD
Sbjct: 113 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 172
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFNSE--------LDTTETMPG 213
IINY++SLQ Q+EFLSMKL A + + + E +T T PG
Sbjct: 173 IINYIQSLQCQVEFLSMKLEAVNAHANQGVEAFPVKDYGAETYNTAPG 220
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 7/95 (7%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHSLAER RREKI+ER+ LQDLVPGC K +G A++LD II
Sbjct: 75 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEII 134
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTET 210
NY++SLQ Q+EFLSMKL A NS ++T+ T
Sbjct: 135 NYIQSLQCQVEFLSMKLEA------VNSRMNTSPT 163
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 68/79 (86%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 121 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 180
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NY++SLQ Q+EFLSMKL A
Sbjct: 181 NYIQSLQRQVEFLSMKLEA 199
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Query: 111 NNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
N +V PK + IHVRA+RGQATDSHSLAER RREKI+++++ LQDLVPGC K G A
Sbjct: 175 NASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAG 234
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
MLD IINYV+SLQ Q+EFLS+KL+ + DFN LDT
Sbjct: 235 MLDEIINYVQSLQRQVEFLSLKLATMNPRTDFN--LDT 270
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 113 ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
E E K+ IHVRA+RGQATDSHSLAERVRREKI ER++ LQ LVP C K G A+MLD
Sbjct: 246 EEKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLD 305
Query: 173 VIINYVRSLQNQIEFLSMKLS 193
IINYV+SLQ Q+EFLSMKLS
Sbjct: 306 EIINYVQSLQRQVEFLSMKLS 326
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 77/107 (71%), Gaps = 8/107 (7%)
Query: 107 KRKRNNER------VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
K KR E V E P IHVRAKRGQA DSHSLAERVRREKI+E++ LQ LVPG
Sbjct: 133 KEKRPREHGGADVDVKEAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPG 192
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS--MYYDFNSEL 205
C K G A+MLD II+YV+SLQNQ+EFLSMKL++ + M Y+F ++
Sbjct: 193 CDKVTGKAMMLDEIISYVQSLQNQVEFLSMKLASLNPMMMYEFGVDI 239
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 133 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 192
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS + F+ E ++ M
Sbjct: 193 SLQRQVEFLSMKLSTVNPELGFDIEQIISKQM 224
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
SG+ ++N + ++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K
Sbjct: 130 SGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 189
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
+G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 190 VIGKALVLDEIINYIQSLQRQVEFLSMKLEA 220
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 11/102 (10%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+ PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQD+VPGC K +G A++LD II
Sbjct: 91 QPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEII 150
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNEC 217
NY++SLQ+Q+EFLSMKL A NS L + T+ EC
Sbjct: 151 NYIQSLQHQVEFLSMKLEA------VNSRLSMSPTI----EC 182
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++SLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT-TETMP 212
Q+EFLSMKL A NS L+T E P
Sbjct: 209 RQVEFLSMKLEA------VNSRLNTGIEAFP 233
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD 223
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 8/122 (6%)
Query: 84 PASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERV 142
P +G L VN + G SG+K K+ + PK+ IHVRA+RGQATD HSLAER
Sbjct: 115 PWAGGVRLRVNGV---LPGHSGKKVKKKEQ----PPKQGFIHVRARRGQATDGHSLAERA 167
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RREKI+ R++ LQ LVPGC + G AVML+ IINYV+SLQ QIEFLSMKL+A D N
Sbjct: 168 RREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTN 227
Query: 203 SE 204
E
Sbjct: 228 VE 229
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 68/80 (85%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 176 NYVRSLQNQIEFLSMKLSAA 195
NY++SLQ Q+EFLSMKL A
Sbjct: 187 NYIQSLQRQVEFLSMKLEAV 206
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHS+AERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ QIEFLSMKL+ + DF+
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFD 249
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+ PK+ IHVRA+RGQATD+HSLAER RREKI+ER++ LQDLVPGC K +G A +LD II
Sbjct: 90 QAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGII 149
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNEC 217
NYV+SLQ Q+EFLSMKL A S T E P C
Sbjct: 150 NYVQSLQRQVEFLSMKLEAVSSRLSMKP---TLECFPSKEVC 188
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHS+AERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ QIEFLSMKL+ + DF+
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFD 249
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++SLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT-TETMP 212
Q+EFLSMKL A NS L+T E P
Sbjct: 209 RQVEFLSMKLEA------VNSRLNTGIEAFP 233
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHS+AERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ QIEFLSMKL+ + DF+
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFD 249
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHS+AERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ QIEFLSMKL+ + DF+
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFD 249
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 68/82 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHS+AERVRREKI+ER++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 165 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 224
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ QIEFLSMKL+ + DF+
Sbjct: 225 LQRQIEFLSMKLAVVNPRPDFD 246
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 68/80 (85%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD II
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 176 NYVRSLQNQIEFLSMKLSAA 195
NY++SLQ Q+EFLSMKL A
Sbjct: 187 NYIQSLQRQVEFLSMKLEAV 206
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 26 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 85
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKLS + F+ E ++ M
Sbjct: 86 SLQRQVEFLSMKLSTVNPELGFDIEQIISKQM 117
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Query: 110 RNNERVVEKPK-EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
+ N++ PK + IHVRA+RGQATDSHSLAER RREKI+++++CLQDLVPGC K G A
Sbjct: 21 KENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRA 80
Query: 169 VMLDVIINYVRSLQNQIEFLSMKLSA 194
MLD IINYV+SLQ Q+EF+SMKL+A
Sbjct: 81 GMLDEIINYVQSLQRQVEFISMKLAA 106
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 66/75 (88%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++
Sbjct: 107 KDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQ 166
Query: 180 SLQNQIEFLSMKLSA 194
SL +Q+EFLSMKL A
Sbjct: 167 SLHHQVEFLSMKLEA 181
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD 223
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Query: 112 NERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N + +E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +
Sbjct: 45 NTQPLEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASV 104
Query: 171 LDVIINYVRSLQNQIEFLSMKLSA 194
LD IINY+++LQ Q+EFLSMKL A
Sbjct: 105 LDEIINYIQALQRQVEFLSMKLEA 128
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E + IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K G A++LD IIN
Sbjct: 131 EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIIN 190
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
YV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 191 YVQSLQNQVEFLSMRIASMSPVLYGFGLDSD 221
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 76/95 (80%), Gaps = 2/95 (2%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTE 209
NYV+SLQ Q+EFLSMKLS + +F+ +EL T +
Sbjct: 192 NYVQSLQQQVEFLSMKLSVLNPELEFHINELSTKQ 226
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E + IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K G A++LD IIN
Sbjct: 131 EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIIN 190
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
YV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 191 YVQSLQNQVEFLSMRIASMSPVLYGFGLDSD 221
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +HVRAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 133 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKL+ + F+ E ++ M
Sbjct: 193 SLQRQVEFLSMKLATVNPELGFDIEQIISKQM 224
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 70/82 (85%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 157 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQS 216
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ +F+
Sbjct: 217 LQKQVEFLSMKIAASNPVVNFD 238
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 70/85 (82%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 141 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 200
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+ + F+ E
Sbjct: 201 SLQRQVEFLSMKLATVNPELGFDIE 225
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFD 220
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 70/85 (82%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 135 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 194
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSE 204
SLQ Q+EFLSMKL+ + F+ E
Sbjct: 195 SLQRQVEFLSMKLATVNPELGFDIE 219
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 106 RKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
RK+K + E IHVRA++GQAT+ HSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 154 RKKKGKGASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKV 213
Query: 165 MGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G AVMLD IINYV+SLQ Q+EFLSMKL+A + N
Sbjct: 214 TGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLN 251
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +HVRAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 142 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 201
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKL+ + F+ E ++ M
Sbjct: 202 SLQRQVEFLSMKLATVNPELSFDIEQILSKQM 233
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFD 220
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 86 SGSGLLSVNNK--GTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVR 143
SG G + N+K GL + ++N+ ++ IHVRA+RGQATDSHSLAER R
Sbjct: 90 SGDGNENSNSKTEAEASSGLCNKLADQSNQPSEAPKQDYIHVRARRGQATDSHSLAERAR 149
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
REKI+ER+ LQDLVPGC K +G A +LD IINY+++LQ Q+EFLSMKL A
Sbjct: 150 REKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 200
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ +H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 101 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 160
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETM 211
SLQ Q+EFLSMKL+ + F+ E ++ M
Sbjct: 161 SLQRQVEFLSMKLATVNPELGFDIEQIISKQM 192
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 7/91 (7%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSH LAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++SLQ
Sbjct: 149 IHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT-TETMP 212
Q+EFLSMKL A NS L+T E P
Sbjct: 209 RQVEFLSMKLEAV------NSRLNTGIEAFP 233
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFD 220
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E + IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ LVPGC K G A++LD IIN
Sbjct: 131 EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIIN 190
Query: 177 YVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
YV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 191 YVQSLQNQVEFLSMRIASMSPVLYGFGLDSD 221
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 66/75 (88%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A++LD IINY++
Sbjct: 69 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 128
Query: 180 SLQNQIEFLSMKLSA 194
SLQ Q+EFLSMKL A
Sbjct: 129 SLQRQVEFLSMKLEA 143
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD IINY++
Sbjct: 129 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 188
Query: 180 SLQNQIEFLSMKLSAASMY 198
+LQ Q+EFLSMKL A + +
Sbjct: 189 ALQRQVEFLSMKLEAVNAH 207
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSMK++A++ F+
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFD 230
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD IINY++
Sbjct: 131 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 190
Query: 180 SLQNQIEFLSMKLSAASMY 198
+LQ Q+EFLSMKL A + +
Sbjct: 191 ALQRQVEFLSMKLEAVNAH 209
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
HVRA++GQAT++HSLAER+RREKI+ER++ LQDLVPGC K G A+MLD IINYV+SLQ
Sbjct: 175 HVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQR 234
Query: 184 QIEFLSMKLSAASMYYDFNSE 204
Q+EFLSMKLSA + D + E
Sbjct: 235 QVEFLSMKLSAVNPRIDLDIE 255
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD IINY++
Sbjct: 131 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 190
Query: 180 SLQNQIEFLSMKLSAASMY 198
+LQ Q+EFLSMKL A + +
Sbjct: 191 ALQRQVEFLSMKLEAVNAH 209
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ HVRAKRGQAT+SHSLAER RREKIN R++ LQDLVPGC K G A+MLD IINY
Sbjct: 147 KREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINY 206
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMP 212
V+SLQ Q+EFLSMKLSA + FN +L+ + P
Sbjct: 207 VQSLQRQVEFLSMKLSA--IRPGFNRDLELQDDHP 239
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 68/80 (85%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN+R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 175 VHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQ 234
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+EFLSM+L+A + DFN
Sbjct: 235 CQVEFLSMRLAAVNPRIDFN 254
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHS+AER RREKI+ER++ LQDLVPGC K +G A +LD II
Sbjct: 103 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEII 162
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYD 200
NY+++LQ Q+EFLSMKL A + + +
Sbjct: 163 NYIQALQRQVEFLSMKLEAVNAHVN 187
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 74/101 (73%)
Query: 102 GLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
G+S K N + + IHVRA+RGQATDSHSLAER RREKI+++++ LQDLVPGC
Sbjct: 179 GISADFSKENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGC 238
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
K G A MLD IINYV+SLQ Q+EFLSMKL+A + +FN
Sbjct: 239 NKITGRAGMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFN 279
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 190 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 249
Query: 183 NQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECD 218
N++E LSMKL+A + DFN LD+ G D
Sbjct: 250 NEVEILSMKLAAVNPVIDFN--LDSLLATEGVTPMD 283
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD IINY++
Sbjct: 90 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 149
Query: 180 SLQNQIEFLSMKLSAASMY 198
+LQ Q+EFLSMKL A + +
Sbjct: 150 ALQRQVEFLSMKLEAVNAH 168
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 73/97 (75%), Gaps = 8/97 (8%)
Query: 110 RNNERVVEK--------PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
RN +VV++ ++ IHVRA+RGQATDSHSLAER RREKI ER++ LQDLVPGC
Sbjct: 91 RNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGC 150
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMY 198
K +G A +LD IINYV++L+ Q+EFLSMKL A + +
Sbjct: 151 NKVIGKASVLDEIINYVQALERQVEFLSMKLEAVNAH 187
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 186 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 245
Query: 183 NQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECD 218
N++E LSMKL+A + DFN LD+ G D
Sbjct: 246 NEVEILSMKLAAVNPVIDFN--LDSLLATEGVTPMD 279
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 69/83 (83%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 181 LQNQIEFLSMKLSAASMYYDFNS 203
LQ Q+EFLSMK++A++ F S
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFAS 224
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 65/76 (85%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATD HSLAER RREKI+E++ LQD++PGC K +G A++LD IIN
Sbjct: 145 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 204
Query: 177 YVRSLQNQIEFLSMKL 192
Y++SLQ Q+EFLSMKL
Sbjct: 205 YIQSLQRQVEFLSMKL 220
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 65/76 (85%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E PK+ IHVRA+RGQATD HSLAER RREKI+E++ LQD++PGC K +G A++LD IIN
Sbjct: 146 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 205
Query: 177 YVRSLQNQIEFLSMKL 192
Y++SLQ Q+EFLSMKL
Sbjct: 206 YIQSLQRQVEFLSMKL 221
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSHSLAERVRREKI+ER+ LQ LVPGC K G A++L+ IINYV+SLQ
Sbjct: 117 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 176
Query: 183 NQIEFLSMKLSAAS-MYYDFNSELD 206
+Q+EFLSMKL++ + M +D +LD
Sbjct: 177 HQVEFLSMKLASVNPMLFDMAMDLD 201
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 91/137 (66%), Gaps = 13/137 (9%)
Query: 101 QGLSGRKRKRNNERVV------EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
QG + +K K E++ EKP +HVRA+RGQATDSHSLAER RREKIN R+ L
Sbjct: 164 QGKAAKKGKTAEEKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELL 222
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD---TTET- 210
++LVPGC K G A++LD IIN+V+SLQ Q+E+LSM+L+A + DF LD TTE
Sbjct: 223 KELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG-LDSFLTTECG 281
Query: 211 -MPGTNECDAQDMERMV 226
+ G N + D+E++
Sbjct: 282 RIAGFNCKNGIDLEQVT 298
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ
Sbjct: 136 VHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQ 195
Query: 183 NQIEFLSMKLSAASMYYDFNSE 204
Q+EFLSMKL+ + F+ E
Sbjct: 196 RQVEFLSMKLATVNPELGFDIE 217
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 70/85 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQD+VPGC K G A++LD IINY++S
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 181 LQNQIEFLSMKLSAASMYYDFNSEL 205
LQ Q+EFLSMKL A ++ + +E+
Sbjct: 197 LQRQVEFLSMKLEAVNLNMNPETEV 221
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT 207
Q+E LSM+L+A + DFN LDT
Sbjct: 262 RQVEMLSMRLAAVNPRIDFN--LDT 284
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT 207
Q+E LSM+L+A + DFN LDT
Sbjct: 262 RQVEMLSMRLAAVNPRIDFN--LDT 284
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 129 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 187
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 188 NYVQSLQQQVEFLSMKLSV 206
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 117 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 176 NYVQSLQQQVEFLSMKLSV 194
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+N + EKP + IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G A M
Sbjct: 116 SNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGM 174
Query: 171 LDVIINYVRSLQNQIEFLS 189
LD IINYV+SLQ Q+EFLS
Sbjct: 175 LDEIINYVQSLQRQVEFLS 193
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 63/72 (87%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATDSHSLAER RREKI+ER++ LQD+VPGC K +G A +LD IINY++SLQ
Sbjct: 121 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 180
Query: 183 NQIEFLSMKLSA 194
Q+EFLSMKL A
Sbjct: 181 RQVEFLSMKLEA 192
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 192 NYVQSLQQQVEFLSMKLSV 210
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 117 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 176 NYVQSLQQQVEFLSMKLSV 194
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 73/99 (73%), Gaps = 6/99 (6%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVR++RGQATDSHSLAER RRE+I ER++ LQDLVPGC K +G A+ LD IINY++
Sbjct: 138 QDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQ 197
Query: 180 SLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECD 218
SLQ Q+EFLSMKL A NS + T+ + G + D
Sbjct: 198 SLQCQVEFLSMKLEA------VNSRMSTSPAIEGLHPKD 230
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 192 NYVQSLQQQVEFLSMKLSV 210
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 192 NYVQSLQQQVEFLSMKLSV 210
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 192 NYVQSLQQQVEFLSMKLSV 210
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
++KP + IHVRA+RG+ATD HSLAER RREKI+++++CLQD+VPGC K G A MLD II
Sbjct: 133 IQKP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NYV+SLQ Q+EFLSMKLS
Sbjct: 192 NYVQSLQQQVEFLSMKLSV 210
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 198 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 257
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT 207
Q+E LSM+L+A + DFN LDT
Sbjct: 258 RQVEMLSMRLAAVNPRIDFN--LDT 280
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 67/80 (83%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD II++V+SLQ
Sbjct: 195 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQ 254
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+EFLSM+L+A + DFN
Sbjct: 255 RQVEFLSMRLAAVNPRIDFN 274
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+ PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQD+VPGC K +G A++LD II
Sbjct: 91 QPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEII 150
Query: 176 NYVRSLQNQIEFLSMKLSA 194
NY++SLQ+Q+EFL MKL A
Sbjct: 151 NYIQSLQHQVEFLFMKLEA 169
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K ++ HVRAKRGQAT+SHSLAER RREKIN R++ LQDLVPGC K G A+MLD IINY
Sbjct: 147 KREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINY 206
Query: 178 VRSLQNQIEFLSMKLSAASMYYDFNSEL 205
V+SLQ Q+EFLSMKLSA ++ + EL
Sbjct: 207 VQSLQRQVEFLSMKLSAIRPGFNRDLEL 234
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 63/72 (87%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQD+VPGC K +G A +LD IINY++S
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 181 LQNQIEFLSMKL 192
LQ Q+EFLSMKL
Sbjct: 106 LQRQVEFLSMKL 117
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 66/80 (82%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 158 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 217
Query: 183 NQIEFLSMKLSAASMYYDFN 202
+++E LSMKL+A + DFN
Sbjct: 218 HEVEILSMKLAAVNPIIDFN 237
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 64/73 (87%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K+ IHVRA+RGQATD HSLAER RREKI+ER++ LQDL+PGC K +G A++LD IINY++
Sbjct: 135 KDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQ 194
Query: 180 SLQNQIEFLSMKL 192
SLQ Q+EFLSMKL
Sbjct: 195 SLQRQVEFLSMKL 207
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 60/72 (83%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHSLAERVRREKI ER++ LQDLVPGC K G AVMLD II
Sbjct: 247 AEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 176 NYVRSLQNQIEF 187
NYV+SLQ Q+E
Sbjct: 307 NYVQSLQRQVEV 318
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+ +K K + E+ +HVRA+RGQATDSHSLAER RREKIN+R++ LQ+LVPGC K
Sbjct: 161 ASKKSKNEGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNK 220
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
G A++LD IIN+V+ LQ Q+E LSM+L+A + DFN
Sbjct: 221 ISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFN 259
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 82/115 (71%), Gaps = 7/115 (6%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
EKP +HVRA+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN
Sbjct: 173 EKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIIN 231
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNSELD---TTET--MPGTNECDAQDMERMV 226
+V+SLQ Q+E+LSM+L+A + DF LD TTE + G N + D+E++
Sbjct: 232 HVQSLQRQVEYLSMRLAAVNPRVDFGG-LDSFLTTECGRIAGFNCKNGIDLEQVT 285
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K+ +N E + PK+ IHVRA+RGQAT+SHSLAER RREKI+ R++ LQ LVPGC +
Sbjct: 3 KKVKNKE---QPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVT 59
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVML+ IINYV+SLQ QIEFLSMKL+A D N E
Sbjct: 60 GKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVE 98
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 82/118 (69%), Gaps = 7/118 (5%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 5 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQ 64
Query: 183 NQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPSYFHSAW 240
++EFLSM+L+A + DF S LD+ ++EC + R G G + SAW
Sbjct: 65 REVEFLSMRLAAVNPRIDF-SGLDSIL----SSECG--HLTSNNRIGTGTVAMEQSAW 115
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V++LQ
Sbjct: 171 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+E LSMKL+A + DFN
Sbjct: 231 RQVEILSMKLAAVNPRIDFN 250
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN+V+SLQ
Sbjct: 105 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 164
Query: 183 NQIEFLSMKLSAASMYYDFNSELD---TTET--MPGTNECDAQDMERMVREGYG 231
Q+E+LSM+L+A + DF LD TTE + G N + D+E++ G
Sbjct: 165 RQVEYLSMRLAAVNPRVDFGG-LDNFLTTECGRITGLNYKNGMDLEQVTWPDMG 217
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R++ L++LVPGC K G A++LD IIN+V+SLQ
Sbjct: 31 VHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQ 90
Query: 183 NQIEFLSMKLSAASMYYDFNSELDT 207
Q+E LSM+L+A + DFN LDT
Sbjct: 91 RQVEMLSMRLAAVNPRIDFN--LDT 113
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN+V+SLQ
Sbjct: 144 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 203
Query: 183 NQIEFLSMKLSAASMYYDFNSELD---TTET--MPGTNECDAQDMERMVREGYG 231
Q+E+LSM+L+A + DF LD TTE + G N + D+E++ G
Sbjct: 204 RQVEYLSMRLAAVNPRVDFGG-LDNFLTTECGRITGLNYKNGMDLEQVTWPDMG 256
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K+ + + V+ PKE IHV+A+RG+A ++HSLAERVRREKI+ER++ LQ LVPGC++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G V+LD IINYV+SLQ Q+EFLSMKL++ + +E
Sbjct: 246 GKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLEAE 284
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 67/81 (82%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ +HVRA+RG+ATDSHSLAER RREKI+ER++ LQ+LVPGC K G A MLD IINYV+S
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 181 LQNQIEFLSMKLSAASMYYDF 201
LQ Q+EFLSMK++A + DF
Sbjct: 62 LQQQVEFLSMKVAALNHRVDF 82
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 66/80 (82%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATD+HSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V++LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQ 242
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+E LSM+L+A + DFN
Sbjct: 243 RQVEMLSMRLAAVNPRIDFN 262
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 113/221 (51%), Gaps = 41/221 (18%)
Query: 17 MGFFSNGSFFDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVES 76
M FS S HH P N++ ++ +VPS+ + D +K ++
Sbjct: 1 MAAFSQQS---HHLHPH-------KNLRLDSTIVPSMSAVFD-------DEKKPTTSISC 43
Query: 77 FMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNER-------------------VVE 117
F S P S G G++ +++K + E V E
Sbjct: 44 F---SDDPVKKITHCSSMGAELGAPGMARKRKKADFEEERDVEEKKGKAEKKRKKKVVKE 100
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
P +HVRA+RG+ATDSHSLAER RREKI+ER++ LQ LVPGC K +G ++LD IINY
Sbjct: 101 VPSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINY 160
Query: 178 VRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNEC 217
V+SLQNQ+EFL KL++ S M + LD++ T+ N C
Sbjct: 161 VKSLQNQVEFLVGKLASISPMLIGHEANLDSS-TLQSENLC 200
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 81/120 (67%), Gaps = 7/120 (5%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
EKP +HVRA+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN
Sbjct: 73 EKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIIN 131
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDFNSELDTTET-----MPGTNECDAQDMERMVREGYG 231
+V+SLQ Q+E+LSM+L+A + DF LD+ T + G N D+E++ G
Sbjct: 132 HVQSLQRQVEYLSMRLAAVNPRVDFGG-LDSFLTSECGRITGLNCKSGMDLEQVTWPDMG 190
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E+ KE +HVRA+ QAT+SHS+AE++RREKI+ER++ LQDLVPGC K G AVMLD II
Sbjct: 139 ERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 198
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSEL 205
NYV+SLQ Q+EFLSMKLS + + EL
Sbjct: 199 NYVQSLQRQVEFLSMKLSTVNPRLGVDIEL 228
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 65/80 (81%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 198 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 257
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+E LSMKL+A + DF+
Sbjct: 258 RQVEILSMKLAAVNPRIDFS 277
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 64/79 (81%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVR +RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 204 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQ 263
Query: 183 NQIEFLSMKLSAASMYYDF 201
Q+E LSMKL+A + DF
Sbjct: 264 RQVEILSMKLAAVNPRIDF 282
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P +HVRA+RG+ATDSHSLAER RREKI+ER++ LQ LVPGC K +G ++LD IINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 179 RSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNEC 217
+SLQNQ+EFL KL++ S M + LD++ T+ N C
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSS-TLQSENLC 200
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 66/80 (82%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATD+HSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+SLQ
Sbjct: 182 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 241
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+E LSM+L+A + +FN
Sbjct: 242 RQVEMLSMRLAAVNPRVEFN 261
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P +HVRA+RG+ATDSHSLAER RREKI+ER++ LQ LVPGC K +G ++LD IINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 179 RSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNEC 217
+SLQNQ+EFL KL++ S M + LD++ T+ N C
Sbjct: 96 KSLQNQVEFLVGKLASISPMLIGHEANLDSS-TLQSENLC 134
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P +HVRA+RG+ATDSHSLAER RREKI+ER++ LQ LVPGC K +G ++LD IINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 179 RSLQNQIEFLSMKLSAAS-MYYDFNSELDTTETMPGTNEC 217
+SLQNQ+EFL KL++ S M + LD+ T+ N C
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSN-TLQSENLC 200
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 13/91 (14%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PK+ IHVRA+RGQATDSHSLAER RREKI+ER++ LQDLVPGC K +G A +LD II
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEII 178
Query: 176 NYVRSLQNQIE------------FLSMKLSA 194
NY++SLQ+Q+E FLSMKL A
Sbjct: 179 NYIQSLQHQVEFMFKYLIELFLQFLSMKLEA 209
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 76/113 (67%), Gaps = 20/113 (17%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERV----------------RREKINERLRCLQDLVP 159
E PK+ IHVRA+RGQATDSHS+AERV RREKI+ER++ LQDLVP
Sbjct: 115 EPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVP 174
Query: 160 GCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMP 212
GC K +G A++LD IINY++SLQ+Q+EFLSMKL A + + N T E P
Sbjct: 175 GCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNP---TNEGFP 224
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 65/80 (81%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+HVRA+RGQATD+HSLAER RREKIN R++ LQ+LVPGC K G ++LD IIN+V++LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQ 242
Query: 183 NQIEFLSMKLSAASMYYDFN 202
Q+E LSM+L+A + DFN
Sbjct: 243 RQVEMLSMRLAAVNPRIDFN 262
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
Query: 107 KRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
K+ + + V+ PKE IHV+A+RG+A ++HSLAERVRREKI+ER++ LQ LVPGC++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G V+LD IINYV+SLQ Q+E LSMKL++ + +E
Sbjct: 246 GKTVVLDEIINYVQSLQQQVELLSMKLASVGLESSLEAE 284
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 62/74 (83%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATD HSLAER RREKI+++++ LQDLVPGC K G A MLD IINYV+S
Sbjct: 183 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQS 242
Query: 181 LQNQIEFLSMKLSA 194
LQ Q+EFLSMKL+
Sbjct: 243 LQRQVEFLSMKLAV 256
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 67/76 (88%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K+ IH+R++RGQAT+SHSLAERVRREKI+ER++ LQDLVPGC K G A++L+ IINYV+
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 180 SLQNQIEFLSMKLSAA 195
SLQ+Q+E LS+KL++
Sbjct: 167 SLQSQVEILSVKLTSV 182
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK--TMGMAVMLDVIINYVRS 180
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K G A++LD IIN+V+S
Sbjct: 30 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQS 89
Query: 181 LQNQIEFLSMKLSAASMYYDFN 202
LQ Q+EFLSM+L+A + DF+
Sbjct: 90 LQRQVEFLSMRLAAVTPRIDFS 111
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
EKP +HVRA+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN
Sbjct: 150 EKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIIN 208
Query: 177 YVRSLQNQIEFLSMKLSAASMYYDF 201
+V+SLQ Q+E+LSM+L+ + DF
Sbjct: 209 HVQSLQRQVEYLSMRLATVNPRGDF 233
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 12/104 (11%)
Query: 103 LSGRKRKRNNERVVEKPKEV------------IHVRAKRGQATDSHSLAERVRREKINER 150
+ G+ RN E + KE IHVRA+RGQATD HSLAER RREKI+++
Sbjct: 151 MKGKSNMRNTEASSDTSKETSKKASEIQKLDYIHVRARRGQATDRHSLAERARREKISKK 210
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
++ LQD+VPGC K G A MLD IINYV+ LQ Q+EFLSMKL+
Sbjct: 211 MKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAV 254
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATD HSLAER RREKI+++++ LQD+VPGC K G A MLD IINYV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 183 NQIEFLSMKLSA 194
Q+EFLSMKL+
Sbjct: 243 RQVEFLSMKLAV 254
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATD HSLAER RREKI+++++ LQD+VPGC K G A MLD IINYV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 183 NQIEFLSMKLSA 194
Q+EFLSMKL+
Sbjct: 243 RQVEFLSMKLAV 254
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATD HSLAER RREKI+++++ LQD+VPGC K G A MLD IINYV+ LQ
Sbjct: 166 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 225
Query: 183 NQIEFLSMKLSA 194
Q+EFLSMKL+
Sbjct: 226 RQVEFLSMKLAV 237
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 90/185 (48%), Gaps = 57/185 (30%)
Query: 75 ESFMNLSPTPASGSGL----LSVNNKG-------TGMQGLSGRKRKRNNERVVEKPKEVI 123
E+ +N +P G+ LS + G G G G + + + E PK+ I
Sbjct: 217 ETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYI 276
Query: 124 HVRAKRGQATDSHSLAERV--------------------------------RREKINERL 151
HVRA+RGQATDSHSLAERV RREKI+ER+
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 152 RCLQDLVPGCYKT--------------MGMAVMLDVIINYVRSLQNQIEFLSMKLSAASM 197
+ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS +
Sbjct: 337 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 396
Query: 198 YYDFN 202
DF+
Sbjct: 397 QLDFD 401
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 90/185 (48%), Gaps = 57/185 (30%)
Query: 75 ESFMNLSPTPASGSGL----LSVNNKG-------TGMQGLSGRKRKRNNERVVEKPKEVI 123
E+ +N +P G+ LS + G G G G + + + E PK+ I
Sbjct: 217 ETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYI 276
Query: 124 HVRAKRGQATDSHSLAERV--------------------------------RREKINERL 151
HVRA+RGQATDSHSLAERV RREKI+ER+
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 152 RCLQDLVPGCYKT--------------MGMAVMLDVIINYVRSLQNQIEFLSMKLSAASM 197
+ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS +
Sbjct: 337 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 396
Query: 198 YYDFN 202
DF+
Sbjct: 397 QLDFD 401
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
IHVRA+RGQATD HSLAER RREKI+++++ LQD+VPGC K G A MLD IINYV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 183 NQIEFLSMKLSA 194
Q+EFLSMKL+
Sbjct: 243 RQVEFLSMKLAV 254
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 90/185 (48%), Gaps = 57/185 (30%)
Query: 75 ESFMNLSPTPASGSGL----LSVNNKG-------TGMQGLSGRKRKRNNERVVEKPKEVI 123
E+ +N +P G+ LS + G G G G + + + E PK+ I
Sbjct: 96 ETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYI 155
Query: 124 HVRAKRGQATDSHSLAERV--------------------------------RREKINERL 151
HVRA+RGQATDSHSLAERV RREKI+ER+
Sbjct: 156 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 215
Query: 152 RCLQDLVPGCYKT--------------MGMAVMLDVIINYVRSLQNQIEFLSMKLSAASM 197
+ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS +
Sbjct: 216 KLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP 275
Query: 198 YYDFN 202
DF+
Sbjct: 276 QLDFD 280
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Query: 123 IHVRAKRGQATDSHSLAERV--------RREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+HVRA+RGQATD+HSLAERV RREKIN R++ LQ+LVPGC K G A++LD I
Sbjct: 127 VHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEI 186
Query: 175 INYVRSLQNQIEFLSMKLSAASMYYDFN 202
IN+V++LQ Q+E LSM+L+A + DFN
Sbjct: 187 INHVQTLQRQVEMLSMRLAAVNPRIDFN 214
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 121 EVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRS 180
+ IHVRA+RGQATDSHSLAERVRRE+I+ER+R LQ+LVPGC K G A MLD IINYV+S
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 181 LQNQIEF----LSMKLSAASMYYDFNSELDTTET 210
LQ Q+E + + + +++ F+++ + E+
Sbjct: 202 LQKQVEVNGTAAAWDIGSQNLFSGFDAQFQSVES 235
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 6/110 (5%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+RGQATDSHSLAER RREKIN R+ L++LVPGC K G A++LD IIN+V+SLQ Q+E
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 187 FLSMKLSAASMYYDFNSELD---TTET--MPGTNECDAQDMERMVREGYG 231
+LSM+L+A + DF LD TTE + G N + D+E++ G
Sbjct: 61 YLSMRLAAVNPRVDFGG-LDNFLTTECGRITGLNYKNGMDLEQVTWPDMG 109
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/67 (74%), Positives = 58/67 (86%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 180 SLQNQIE 186
LQ Q+E
Sbjct: 61 FLQRQVE 67
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 58/68 (85%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P++ IHVRA++GQATDSHSL ERVRREKI+ER++ LQ+LVPGC K G A MLD IINYV
Sbjct: 126 PEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYV 185
Query: 179 RSLQNQIE 186
+SLQ Q+E
Sbjct: 186 QSLQRQVE 193
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 105/230 (45%), Gaps = 73/230 (31%)
Query: 62 DTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE 121
+ SNGK+ M +S TP G + ++G K ++ + ++
Sbjct: 107 NASNGKR---------MKISRTPDENGG----SKAELEASSVAGEKPAEESKPAEQSKQD 153
Query: 122 VIHVRAKRGQATDSHSLAERV--------------------------------------- 142
IHVRA+RGQATDSHSLAERV
Sbjct: 154 YIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVS 213
Query: 143 -----RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASM 197
RREKI+ER++ LQDLVPGC K +G A++LD IINY++SLQ Q+EFLSMKL A
Sbjct: 214 VYINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA--- 270
Query: 198 YYDFNSELD-TTETMP----GTNECDAQDM---ERMVREGYGG--PSYFH 237
NS ++ T E P G DA M + RE G P + H
Sbjct: 271 ---VNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGSQPEWLH 317
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC K G AVMLD IINYV+SLQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 185 IE 186
+E
Sbjct: 61 VE 62
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
SG K NE +K ++ IHVRA+RG+ATDSHSLAERVRRE+I+ER++ L+ LVPGC K
Sbjct: 132 SGNGSKEKNE---DKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNK 188
Query: 164 TMGMAVMLDVIINYVRSLQ 182
G A MLD IINYV+SLQ
Sbjct: 189 ITGKAGMLDEIINYVQSLQ 207
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 75/113 (66%), Gaps = 10/113 (8%)
Query: 105 GRKRKRNNERVVEKPKEV---------IHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
G+ ++ E K K+V +HVRA+RG+ATD HSLAERVRR+KI+ R++ LQ
Sbjct: 135 GKPERKRPEPRARKEKKVAKEHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQ 194
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDT 207
LVPGC K G A +LD II +V SLQNQ+EFL+ K ++ + + + N E++T
Sbjct: 195 SLVPGCDKLTGKAQILDEIIRHVLSLQNQVEFLAAKFTSENGIANEVNYEMNT 247
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 63/105 (60%), Gaps = 29/105 (27%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC------------------ 161
K+ IHVRA+RGQATDSHSLAERVRREKI+ER++ LQDLVPGC
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 162 -----------YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAA 195
K G AVMLD IINYV+SLQ Q+E + L +A
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSA 377
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K + ++ + E PK+ IHVRA+RGQ DSH AERVRREKI+E L LQDLVP +
Sbjct: 2 KKLEADDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRIT 61
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSMKLS 193
G A LD IINYV+SL+ Q+E L MKL+
Sbjct: 62 GKADSLDEIINYVQSLKRQVELLYMKLA 89
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
R K+ + VE P +HVRA+RG+ATDSHSLAERVRREKI+ R++ LQ LVPGC K
Sbjct: 142 RPAKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKIT 201
Query: 166 GMAVMLDVIINYVRSLQNQIEF 187
G A++LD II+YV+ L+++++
Sbjct: 202 GKALVLDEIISYVQFLKDRVQV 223
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
++VRA+RG+A DSHSLAERVRR+KI+ +++ LQ LVPGC KT G +LD IINY+ SLQ
Sbjct: 134 VYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQ 193
Query: 183 NQIEFLSMKLSAASMYYDFN 202
+Q++ L +L+ +D N
Sbjct: 194 DQVKSLMEELALVDPTFDVN 213
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 69/132 (52%), Gaps = 49/132 (37%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK------------------- 163
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLL 261
Query: 164 ----------------------------TMGMAVMLDVIINYVRSLQNQIEFLSMKLSAA 195
G A++LD IIN+V+SLQ Q+E LSM+L+A
Sbjct: 262 MISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAV 321
Query: 196 SMYYDFNSELDT 207
+ DFN LDT
Sbjct: 322 NPRIDFN--LDT 331
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%)
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
++ I VRA+RGQATDS S+AE VR EKI +R++ LQDLVPGC K G MLD IINYV+
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 180 SLQNQIEFLSMKLSAA 195
SLQ Q E LSMKL A
Sbjct: 66 SLQCQAESLSMKLGAV 81
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
+E P +HVRA+RG+ATDSHSLAERVRRE+I+ +++ LQ LVPGC + G A++LD II
Sbjct: 68 LEHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEII 127
Query: 176 NYVRSLQNQIEFLSMKL 192
YV+SL+++I L +L
Sbjct: 128 RYVQSLKDRIGSLEAEL 144
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 75 ESFMNLSPTPASGSGL----LSVNNKG-------TGMQGLSGRKRKRNNERVVEKPKEVI 123
E+ +N +P G+ LS + G G G G + + + E PK+ I
Sbjct: 213 ETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYI 272
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLR--------CLQDLVPGCY--KTMGMAVMLDV 173
HVRA+RGQATDSHSLAERV + + D + + + G AVMLD
Sbjct: 273 HVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTGKAVMLDE 332
Query: 174 IINYVRSLQNQIEFLSMKLSAASMYYDFN 202
IINYV+SLQ Q+EFLSMKLS + DF+
Sbjct: 333 IINYVQSLQRQVEFLSMKLSTVNPQLDFD 361
>gi|388503752|gb|AFK39942.1| unknown [Medicago truncatula]
Length = 73
Score = 90.5 bits (223), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/73 (58%), Positives = 53/73 (72%)
Query: 170 MLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTNECDAQDMERMVREG 229
MLD IINYV+SLQ+Q+EFLS+KL+AAS YYDFNSE D ETM +A+++ R R+G
Sbjct: 1 MLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSEADDLETMQRARASEAKELARYKRDG 60
Query: 230 YGGPSYFHSAWSL 242
YGG S F W L
Sbjct: 61 YGGISCFQPTWPL 73
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 6/97 (6%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV
Sbjct: 177 PPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYV 235
Query: 179 RSLQNQIEFLSM-KLSAAS----MYYDFNSELDTTET 210
+ LQ Q++ LSM +L A+ + +SE +++ T
Sbjct: 236 KFLQLQVKVLSMSRLGGAAGMAPLVASMSSEANSSNT 272
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 86 SGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRRE 145
SG GL++ + V P+ VRA+RGQATD HS+AER+RRE
Sbjct: 99 SGGGLMNQQGQTQTQTQPQASASTATGGTVAVPPQSRTKVRARRGQATDPHSIAERLRRE 158
Query: 146 KINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LSM
Sbjct: 159 RIAERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 202
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I+ER++ LQ+LVP C KT A MLD I++YV+ L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 200
Query: 185 IEFLSM-KLSAAS 196
++ LSM +L AS
Sbjct: 201 VKVLSMSRLGGAS 213
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I+ER++ LQ+LVP C KT A MLD I++YV+ L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 199
Query: 185 IEFLSM-KLSAAS 196
++ LSM +L AS
Sbjct: 200 VKVLSMSRLGGAS 212
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V P+ +RA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I
Sbjct: 128 VAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEI 186
Query: 175 INYVRSLQNQIEFLSM 190
I+YV+ LQ Q++ LSM
Sbjct: 187 IDYVKFLQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V P+ +RA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I
Sbjct: 128 VAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEI 186
Query: 175 INYVRSLQNQIEFLSM 190
I+YV+ LQ Q++ LSM
Sbjct: 187 IDYVKFLQLQVKVLSM 202
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+PK+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 199 QPKQ--KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 255
Query: 178 VRSLQNQIEFLSMK-----LSAASMYYDFNSE 204
V+ LQ Q++ LSM + A + D +SE
Sbjct: 256 VKFLQLQVKVLSMSRLGGAAAVAPLVADVSSE 287
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+ + P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP C KT A MLD I
Sbjct: 147 IPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEI 205
Query: 175 INYVRSLQNQIEFLSM 190
++YV+ L+ Q++ LSM
Sbjct: 206 VDYVKFLRLQVKVLSM 221
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 21/123 (17%)
Query: 87 GSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREK 146
GSG +S N+ G + R++ VRA+RGQATD HS+AER+RRE+
Sbjct: 173 GSGSVSATNQAPA-SGAPAQPRQK--------------VRARRGQATDPHSIAERLRRER 217
Query: 147 INERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKL-----SAASMYYDF 201
I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LSM + A + D
Sbjct: 218 IAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLVADM 276
Query: 202 NSE 204
+SE
Sbjct: 277 SSE 279
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+ + P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP C KT A MLD I
Sbjct: 48 IPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEI 106
Query: 175 INYVRSLQNQIEFLSM 190
++YV+ L+ Q++ LSM
Sbjct: 107 VDYVKFLRLQVKVLSM 122
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 21/123 (17%)
Query: 87 GSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREK 146
GSG +S N+ G + R++ VRA+RGQATD HS+AER+RRE+
Sbjct: 176 GSGSVSATNQAPA-SGAPAQPRQK--------------VRARRGQATDPHSIAERLRRER 220
Query: 147 INERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKL-----SAASMYYDF 201
I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LSM + A + D
Sbjct: 221 IAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLVADM 279
Query: 202 NSE 204
+SE
Sbjct: 280 SSE 282
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT AVMLD I++
Sbjct: 114 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAVMLDEILD 172
Query: 177 YVRSLQNQIEFLSM 190
YV+ L+ Q++ LSM
Sbjct: 173 YVKFLRLQVKVLSM 186
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 232
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 233 VKVLSMSRLGGAAAVAPLVADISSE 257
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+P++ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 32 QPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 88
Query: 178 VRSLQNQIEFLSMK-----LSAASMYYDFNSE 204
V+ LQ Q++ LSM + A + D +SE
Sbjct: 89 VKFLQLQVKVLSMSRLGGAAAVAPLVADMSSE 120
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 185 IEFLSM-KLSAASMYYDFNSELDT 207
++ LSM +L AA +E T
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTETQT 396
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V +KP+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I
Sbjct: 93 VRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEI 147
Query: 175 INYVRSLQNQIEFLSM 190
I YVR LQ Q++ LSM
Sbjct: 148 IEYVRFLQLQVKVLSM 163
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Query: 126 RAKRGQATDS-HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
R R + T S +S +VRRE+I+ER+R LQ LVPGC K G A++LD IINYV+SLQNQ
Sbjct: 61 RKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 120
Query: 185 IEFLSMKLSAAS-MYYDFNSELDTTETMPGTNECDAQDMERMVREGYGGPS 234
+EFLSM++++ S + Y F + D +Q ME M E P+
Sbjct: 121 VEFLSMRIASLSPVLYGFGIDSDAFSD-------HSQKMEGMFHEAVAIPA 164
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 185 IEFLSM-KLSAASMYYDFNSELDT 207
++ LSM +L AA +E T
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTETQT 396
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 256 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 314
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 315 VKVLSMSRLGGAAAVAPLVADISSE 339
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V +KP+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I
Sbjct: 93 VRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEI 147
Query: 175 INYVRSLQNQIEFLSM 190
I YVR LQ Q++ LSM
Sbjct: 148 IEYVRFLQLQVKVLSM 163
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 311
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 312 VKVLSMSRLGGAAAVAPLVADMSSE 336
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 65 NGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTG-MQGLSGRKRKRNNERV-VEKPKEV 122
G KA TV+ L P G G+ N + T Q ++ K+ V + P
Sbjct: 72 GGSKADRETVQ-LTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPR 130
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+
Sbjct: 131 PKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLR 189
Query: 183 NQIEFLSM 190
Q++ LSM
Sbjct: 190 LQVKVLSM 197
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
+G+G Q S +P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ
Sbjct: 99 QGSGGQTQSQATASTTTGGTTVQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQ 158
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+LVP KT A MLD II+YV+ LQ Q++ LSM
Sbjct: 159 ELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 192
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ LQ Q
Sbjct: 240 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDYVKFLQLQ 298
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 299 VKVLSMSRLGGAAAVAPLVADMSSE 323
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ LQ Q
Sbjct: 239 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDYVKFLQLQ 297
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 298 VKVLSMSRLGGAAAVAPLVADMSSE 322
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RRE+I ER++ LQDLVP KT A MLD I++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKT-DKASMLDEIVDYVKFLQL 61
Query: 184 QIEFLSM-KLSAA----SMYYDFNSE 204
Q++ LSM +L +A S+ D SE
Sbjct: 62 QVKVLSMSRLGSAAAVPSLVADLPSE 87
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V P+ +RA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I
Sbjct: 128 VAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEI 186
Query: 175 INYVRSLQNQIEFLSM 190
I+YV LQ Q++ LSM
Sbjct: 187 IDYVEFLQLQVKVLSM 202
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+PK+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 241 QPKQQ-RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 298
Query: 178 VRSLQNQIEFLSM 190
V+ LQ Q++ LSM
Sbjct: 299 VKFLQLQVKVLSM 311
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 11/89 (12%)
Query: 142 VRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDF 201
VRRE+I+ER++ LQ LVPGC K G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF
Sbjct: 204 VRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDF 263
Query: 202 NSELDTTETMPGTNECDAQDMERMVREGY 230
+S MP ++DM M Y
Sbjct: 264 DSHY-----MP------SKDMSHMPVPAY 281
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 123 QPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDY 181
Query: 178 VRSLQNQIEFLSM 190
V+ LQ Q++ LSM
Sbjct: 182 VKFLQLQVKVLSM 194
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 123 QPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDY 181
Query: 178 VRSLQNQIEFLSM 190
V+ LQ Q++ LSM
Sbjct: 182 VKFLQLQVKVLSM 194
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+P++ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 99 QPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 155
Query: 178 VRSLQNQIEFLSMK-----LSAASMYYDFNSE 204
V+ LQ Q++ LSM + A + D +SE
Sbjct: 156 VKFLQLQVKVLSMSRLGGAAAVAPLVADMSSE 187
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYV 256
Query: 179 RSLQNQIEFLSM 190
+ LQ Q++ LSM
Sbjct: 257 KFLQLQVKVLSM 268
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+PK+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 192 QPKQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 248
Query: 178 VRSLQNQIEFLSM 190
V+ LQ Q++ LSM
Sbjct: 249 VKFLQLQVKVLSM 261
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYV 256
Query: 179 RSLQNQIEFLSM 190
+ LQ Q++ LSM
Sbjct: 257 KFLQLQVKVLSM 268
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+P+ VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+Y
Sbjct: 180 QPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDY 238
Query: 178 VRSLQNQIEFLSM 190
V+ LQ Q++ LSM
Sbjct: 239 VKFLQLQVKVLSM 251
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 194
Query: 185 IEFLSM 190
++ LSM
Sbjct: 195 VKVLSM 200
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 64 SNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTG-MQGLSGRKRKRNNERV-VEKPKE 121
++G KA ++ L P PA G G+ + + T Q ++ K+ V + P
Sbjct: 63 ADGGKADREAIQ-LPGLFP-PAFGGGVQPPHLRATPPTQVFHAQQPKQGGAAVGPQPPAP 120
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L
Sbjct: 121 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFL 179
Query: 182 QNQIEFLSM 190
+ Q++ LSM
Sbjct: 180 RLQVKVLSM 188
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQVQ 202
Query: 185 IEFLSM 190
++ LSM
Sbjct: 203 VKVLSM 208
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQDLVP KT A MLD I++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 239
Query: 185 IEFLSM 190
++ LSM
Sbjct: 240 VKVLSM 245
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II YV+ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 185 IEFLSMK-----LSAASMYYDFNSEL 205
++ LSM + A + D +SE+
Sbjct: 89 VKVLSMSRLGGAAAVAPLVADISSEV 114
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 283
Query: 185 IEFLSM 190
++ LSM
Sbjct: 284 VKVLSM 289
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YVR LQ Q+
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVRFLQLQV 253
Query: 186 EFLSM 190
+ LSM
Sbjct: 254 KVLSM 258
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 185 IEFLSM 190
++ LSM
Sbjct: 379 VKVLSM 384
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 88
Query: 184 QIEFLSM 190
Q++ LSM
Sbjct: 89 QVKVLSM 95
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 89
Query: 184 QIEFLSM 190
Q++ LSM
Sbjct: 90 QVKVLSM 96
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQDLVP KT A MLD I++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 190
Query: 185 IEFLSM 190
++ LSM
Sbjct: 191 VKVLSM 196
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++
Sbjct: 107 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 165
Query: 177 YVRSLQNQIEFLSM 190
YV+ L+ Q++ LSM
Sbjct: 166 YVKFLRLQVKVLSM 179
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++
Sbjct: 108 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 166
Query: 177 YVRSLQNQIEFLSM 190
YV+ L+ Q++ LSM
Sbjct: 167 YVKFLRLQVKVLSM 180
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RR +I ER++ LQ+LVP C KT A MLD I++YV+ L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVDYVKFLRL 73
Query: 184 QIEFLSM-KLSAA 195
QI+ LSM +L AA
Sbjct: 74 QIKVLSMSRLGAA 86
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 65 NGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTG-MQGLSGRKRKRNNERV-VEKPKEV 122
G KA TV+ L P G G+ N + T Q ++ K+ V + P
Sbjct: 72 GGSKADRETVQ-LTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPR 130
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+
Sbjct: 131 PKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLR 189
Query: 183 NQIEFLSM 190
Q++ LS+
Sbjct: 190 LQVKVLSI 197
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 185 IEFLSM 190
++ LSM
Sbjct: 379 VKVLSM 384
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 100 MQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVP 159
+Q G + +P VRA+RGQATD HS+AER+RRE+I+ER++ LQ+LVP
Sbjct: 109 VQPFQGHPTSSTTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVP 168
Query: 160 GCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
C KT A ++D I++YV+ L+ Q++ LSM
Sbjct: 169 NCNKT-DRAALVDEILDYVKFLRLQVKVLSM 198
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 185 IEFLSM 190
++ LSM
Sbjct: 379 VKVLSM 384
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RGQATD HS+AER+RREKI+ER++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 315 TRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 373
Query: 185 IEFLSM 190
++ LSM
Sbjct: 374 VKVLSM 379
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RR +I ER++ LQ+LVP C KT A MLD I++YV+ L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVDYVKFLRL 77
Query: 184 QIEFLSM-KLSAASMYYDFNSEL 205
Q++ LSM +L AA +++
Sbjct: 78 QVKVLSMSRLGAAGAVAQLVADV 100
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q+
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 254
Query: 186 EFLSM-KLSAAS 196
+ LSM +L A+
Sbjct: 255 KVLSMSRLGGAT 266
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q+
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 247
Query: 186 EFLSM 190
+ LSM
Sbjct: 248 KVLSM 252
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 177 YVRSLQNQIEFLSM 190
YV+ L+ Q++ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI ER++ LQ+LVP KT A MLD II YV+ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 354
Query: 185 IEFLSM-KLSAA 195
++ LSM +L AA
Sbjct: 355 VKVLSMSRLGAA 366
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 375
Query: 185 IEFLSM 190
++ LSM
Sbjct: 376 VKVLSM 381
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 340
Query: 185 IEFLSM 190
++ LSM
Sbjct: 341 VKVLSM 346
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQAT HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 260 VRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 318
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
++ LSM + A + D +SE
Sbjct: 319 VKVLSMSRLGGAAAVAPLVADMSSE 343
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI ER++ LQ+LVP KT A MLD II YV+ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 207
Query: 185 IEFLSM-KLSAA 195
++ LSM +L AA
Sbjct: 208 VKVLSMSRLGAA 219
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 275
Query: 185 IEFLSM 190
++ LS+
Sbjct: 276 VKVLSV 281
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+ P VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++
Sbjct: 16 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 74
Query: 177 YVRSLQNQIEFLSM 190
YV+ L+ Q++ LSM
Sbjct: 75 YVKFLRLQVKVLSM 88
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
N KP+ RA+RGQATD HS+AER+RREKI+ER++ LQDLVP K + M
Sbjct: 310 NGNSASAKPR----ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSM 364
Query: 171 LDVIINYVRSLQNQIEFLSM 190
LD II+YV+ LQ Q++ LSM
Sbjct: 365 LDEIIDYVKFLQLQVKVLSM 384
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDYVKFLRLQ 227
Query: 185 IEFLSM 190
++ LSM
Sbjct: 228 VKVLSM 233
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 209
Query: 185 IEFLSM 190
++ LSM
Sbjct: 210 VKVLSM 215
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP K+ A MLD I++YV+ L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRAAMLDEIVDYVKFLRLQ 238
Query: 185 IEFLSM 190
++ LSM
Sbjct: 239 VKVLSM 244
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDYVKFLRLQ 157
Query: 185 IEFLSM 190
++ LSM
Sbjct: 158 VKVLSM 163
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 110 RNNERVVEK----PKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
RN + V++ PK+ IHVRA+RGQATDSHSLAER RREKI ER++ LQDLVPGC K
Sbjct: 100 RNASKAVDQNPPPPKQDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKL 159
Query: 165 M 165
M
Sbjct: 160 M 160
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A M+D I++YV+ L+ Q
Sbjct: 163 VRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRAAMIDEIVDYVKFLRLQ 221
Query: 185 IEFLSM-KLSAA 195
++ LSM +L AA
Sbjct: 222 VKVLSMSRLGAA 233
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQDLVP K A MLD II++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDHVKFLQLQ 378
Query: 185 IEFLSM 190
++ LSM
Sbjct: 379 VKVLSM 384
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
+PK+ RA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++Y
Sbjct: 123 RPKQ----RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDY 177
Query: 178 VRSLQNQIEFLSM 190
V+ L+ Q++ LSM
Sbjct: 178 VKFLRLQVKVLSM 190
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 224
Query: 185 IEFLSM 190
++ LSM
Sbjct: 225 VKVLSM 230
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 233
Query: 185 IEFLSM 190
++ LSM
Sbjct: 234 VKVLSM 239
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 227
Query: 185 IEFLSM 190
++ LSM
Sbjct: 228 VKVLSM 233
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RREKI++R++ LQ+LVP +T A MLD II YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQL 355
Query: 184 QIEFLSM 190
Q++ LSM
Sbjct: 356 QVKVLSM 362
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+ N KP+ RA+RGQATD HS+AER+RREKI+ER++ LQDLVP K
Sbjct: 304 KANSANGNSASAKPR----ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA- 358
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSM 190
+ MLD II+YV+ LQ Q++ L M
Sbjct: 359 DKSSMLDEIIDYVKFLQLQVKVLCM 383
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RREKI ER++ LQ+LVP K + A MLD II YV+ LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSK-VDKASMLDEIIEYVKFLQL 408
Query: 184 QIEFLSM 190
Q++ LSM
Sbjct: 409 QVKVLSM 415
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP K A MLD+ + Y++ LQNQ
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 185 IEFLS 189
+E LS
Sbjct: 397 VEALS 401
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V KP+ RA+RGQATD HS+AER+RREKI+ER++ LQ+LVP K + MLD I
Sbjct: 315 VSAKPRS----RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKA-DKSSMLDEI 369
Query: 175 INYVRSLQNQIEFLSM 190
I+YV+ LQ Q++ LSM
Sbjct: 370 IDYVKFLQLQVKVLSM 385
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 23/111 (20%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRC 153
N ++G K ++N E PKE IHVRA+RGQAT+SHSLAER+
Sbjct: 234 NMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERI----------- 282
Query: 154 LQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
G AVMLD IINYV+SLQ Q+EFLSMKL+ + + + E
Sbjct: 283 -----------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIE 322
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 25/91 (27%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IHVRAKRGQAT+SHSLAER+ G AVMLD II
Sbjct: 237 EAPKEDYIHVRAKRGQATNSHSLAERI----------------------TGKAVMLDEII 274
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++Y + N +++
Sbjct: 275 NYVQSLQRQVEFLSMKL--ATVYPEMNVQIE 303
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RGQATD HS+AER+RREKI+ER++ LQ LVP K A MLD II+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 185 IEFLSM 190
++ LSM
Sbjct: 375 VKVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RGQATD HS+AER+RREKI+ER++ LQ LVP K A MLD II+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 185 IEFLSM 190
++ LSM
Sbjct: 375 VKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RGQATD HS+AER+RREKI+ER++ LQ LVP K A MLD II+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 374
Query: 185 IEFLSM 190
++ LSM
Sbjct: 375 VKVLSM 380
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 8/85 (9%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 308
Query: 185 IEFLSMK-----LSAASMYYDFNSE 204
+ LSM + A + D +SE
Sbjct: 309 V--LSMSRLGGAAAVAPLVADMSSE 331
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RGQATD HS+AER+RREKI+ER++ LQ LVP K A MLD II+YV+ LQ Q
Sbjct: 239 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQ 297
Query: 185 IEFLSM 190
++ LSM
Sbjct: 298 VKVLSM 303
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RG ATD HS+AER+RREKI ER++ LQ+LVP K + A MLD II YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQL 297
Query: 184 QIEFLSM-KLSAA 195
Q++ LSM +L AA
Sbjct: 298 QVKVLSMSRLGAA 310
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP K A MLD+ + Y++ LQNQ
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 185 IEFLS 189
++ LS
Sbjct: 400 VQTLS 404
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP K + MLD+ + Y++ LQNQ
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 185 IEFLS 189
+E LS
Sbjct: 415 VETLS 419
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 105 GRKRKRNNERVVEKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
G+ + + E KE IHVRA+RGQAT+SHSLAER+RREKI+ER++ LQDLVPGC K
Sbjct: 232 GKSKGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 217
Query: 185 IE 186
++
Sbjct: 218 VK 219
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 11/91 (12%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM--AVMLDVIINYVRSLQ 182
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K M A MLD II+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 183 NQIE----FLSMK-----LSAASMYYDFNSE 204
Q++ LSM + A + D +SE
Sbjct: 298 LQVKASMHVLSMSRLGGAAAVAPLVADMSSE 328
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM--AVMLDVIINYVRSLQ 182
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K M A MLD II+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 183 NQIE 186
Q++
Sbjct: 310 LQVK 313
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
K ++ +HVRAKRGQAT+SHSLAER RREKINER++ LQDLVPGC K
Sbjct: 147 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 140 ERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS 196
ERVRRE+I ER++ LQ LVPGC K G A ML+ IINYV+SLQ Q+EFLSMKL+ +
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVN 59
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQ+LVP KT A ML+ II Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKT-DKASMLEEIIEYIKFLQLQ 340
Query: 185 IEFLSM 190
+ LSM
Sbjct: 341 TKVLSM 346
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 86/186 (46%), Gaps = 51/186 (27%)
Query: 62 DTSNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKE 121
+ SNGK+ M +S TP G + ++G K ++ + ++
Sbjct: 107 NASNGKR---------MKISRTPDENGG----SKAELEASSVAGEKPAEESKPAEQSKQD 153
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
IHVRA+RGQATDSHSLAERV +G A++LD IINY++SL
Sbjct: 154 YIHVRARRGQATDSHSLAERV----------------------IGKALVLDEIINYIQSL 191
Query: 182 QNQIEFLSMKLSAASMYYDFNSELD-TTETMP----GTNECDAQDM---ERMVREGYGG- 232
Q Q+EFLSMKL A NS ++ T E P G DA M + RE G
Sbjct: 192 QRQVEFLSMKLEA------VNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGS 245
Query: 233 -PSYFH 237
P + H
Sbjct: 246 QPEWLH 251
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP K A MLD+ ++Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 185 IEFLS 189
++ LS
Sbjct: 393 VQTLS 397
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP K A MLD+ ++Y++ LQ Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 185 IEFLS 189
++ LS
Sbjct: 390 VQTLS 394
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA RGQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q+
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 298
Query: 186 EFLSMKLSAAS---MYYDFNSE 204
+S AA+ + D +SE
Sbjct: 299 LSMSRLGGAAAVAPLVADMSSE 320
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
GQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQLQVKVLS 227
Query: 190 M-KLSAASMYYDFNSELDTTETMPGTNECDAQD 221
M +L A+ + L + + G + D
Sbjct: 228 MSRLGGAAAVGPLAAGLSSESSGNGNGTSSSGD 260
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
GQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 190 MKL--SAASMYYDFNSELDTTETMPGTNECDAQD 221
M +A ++ D E D+ + + + AQD
Sbjct: 323 MSRLGNAGAVMTDLPPE-DSNQFLAALGQNGAQD 355
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQDLVP K + MLD+ ++Y++ LQ Q
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 185 IEFLS 189
+E LS
Sbjct: 399 VETLS 403
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
GQATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 190 MKL--SAASMYYDFNSELDTTETMPGTNECDAQD 221
M +A ++ D E D+ + + + AQD
Sbjct: 323 MSRLGNAGAVMTDLPPE-DSNQFLAALGQNGAQD 355
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 25/91 (27%)
Query: 117 EKPKE-VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E PKE IH+RA+RGQAT+SHSLAER+ G AVMLD II
Sbjct: 197 EAPKENYIHMRARRGQATNSHSLAERI----------------------TGKAVMLDEII 234
Query: 176 NYVRSLQNQIEFLSMKLSAASMYYDFNSELD 206
NYV+SLQ Q+EFLSMKL A++ + N ++D
Sbjct: 235 NYVQSLQQQVEFLSMKL--ATVNPEINIDID 263
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RREKI++R++ LQ+LVP +T A MLD II YV+ LQ Q
Sbjct: 298 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQLQ 356
Query: 185 IEFLSMK 191
++ S +
Sbjct: 357 VKVRSPR 363
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM-----GMAVMLDVIINYVR 179
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K + A MLD II+YV+
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 180 SLQNQ 184
LQ Q
Sbjct: 345 FLQLQ 349
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAKRG AT S+AERVRR KI+ER++ LQDLVP K + MLD + YV+SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 183 NQIEFLS---MKLSAAS---MYYDF 201
Q++ LS ++L AA+ ++ DF
Sbjct: 441 RQVQELSDTVVRLEAAAAQKIFSDF 465
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+HVRA+RGQATDSHSLAER RREKIN R++ LQ+LVPGC K
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
+ G A++LD IIN+V+SLQ Q+E LSM+L+A + DFN LDT
Sbjct: 301 FTIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFN--LDT 344
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LV KT A MLD II+YV+ LQ Q
Sbjct: 145 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDYVKFLQLQ 203
Query: 185 IEFLS 189
+ +S
Sbjct: 204 VLSMS 208
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 113 ERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
E++++ P V +RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A ML
Sbjct: 281 EKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADML 340
Query: 172 DVIINYVRSLQNQIEFLSMK 191
D+ + Y++ LQ Q + LS K
Sbjct: 341 DLAVEYIKDLQKQFKTLSEK 360
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 39/41 (95%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+H+RAKRGQAT+SHSLAER+RR+KI+ER++ LQDLVPGC K
Sbjct: 136 VHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNK 176
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LV KT A MLD II+YV+ LQ
Sbjct: 116 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDYVKFLQL 174
Query: 184 QIEFLS 189
Q+ +S
Sbjct: 175 QVLSMS 180
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 152 RCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
R LQDLVPGC K +G AVMLD IINYV+SLQ Q+EFLSMKL+ + DFNS
Sbjct: 119 RSLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNS 170
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 185 IEFL 188
++ L
Sbjct: 385 VKVL 388
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+HVRA+RGQATD+HSLAER RREKIN R++ LQ+LVPGC K
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK 223
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ +RAKRG AT S+AERVRR KI+ER+R LQDLVP K A MLD+ ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 183 NQIEFL 188
Q + L
Sbjct: 390 KQAQKL 395
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K A MLD+ ++Y++ LQ
Sbjct: 159 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 218
Query: 184 QIEFL 188
Q++ L
Sbjct: 219 QVKVL 223
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQDLVP K A MLD+ ++Y++ LQ Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 185 IEFLS 189
+ LS
Sbjct: 342 FKTLS 346
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 18 GFFSNGSFFDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSH-----DTSNGKKAAAH 72
G + G F + P +S +D IQS G+ A++ + D S G K +
Sbjct: 87 GLYQQGGFHRQNSTPADFLSGSDGFIQS-------FGIPANYDYLSGNIDVSPGSKRSRE 139
Query: 73 TVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQA 132
F +P S + + G G+SG N E ++E VRAKRG A
Sbjct: 140 MEALFS----SPEFTSQMKGEQSSGQVPAGVSGMT-DMNMENLMED-SVAFRVRAKRGCA 193
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
T S+AERVRR +I++R+R LQ+LVP K A ML+ + YV+ LQ QI+ L+
Sbjct: 194 THPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 250
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 324
Query: 187 FLSMKLSAASMYY 199
+SM S M Y
Sbjct: 325 MMSMGCSMVPMMY 337
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 362
Query: 187 FLSMKLSAASMYY 199
+SM S M Y
Sbjct: 363 MMSMGCSMVPMMY 375
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 113 ERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
+++++ P V +RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A ML
Sbjct: 287 KKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADML 346
Query: 172 DVIINYVRSLQNQIEFLSMK 191
D+ + Y++ LQ Q + LS K
Sbjct: 347 DLAVEYIKDLQKQFKTLSEK 366
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTE 209
++ LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSMKL+ + M+YD +LDT
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 210 TMP 212
P
Sbjct: 61 VRP 63
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELDTTE 209
++ LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSMKL+ + M+YD +LDT
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 210 TMP 212
P
Sbjct: 61 VRP 63
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 185 IEFL 188
++ L
Sbjct: 379 VKVL 382
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 185 IEFL 188
++ L
Sbjct: 378 VKVL 381
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQDLVP K + MLD+ ++Y++ LQ Q
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 185 IEFLS 189
+ LS
Sbjct: 404 FKALS 408
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I++R+R LQ+LVP K A MLD + YV+ LQNQ
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 185 IEFLS 189
IE LS
Sbjct: 178 IEELS 182
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 185 IEFL 188
++ L
Sbjct: 345 VKVL 348
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 187 FLSMKLSAASMY 198
+SM A MY
Sbjct: 376 IMSM---GAGMY 384
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 187 FLSMKLSAASMY 198
+SM A MY
Sbjct: 376 IMSM---GAGMY 384
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 187 FLSMKLSAASMY 198
+SM A MY
Sbjct: 376 IMSM---GAGMY 384
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 185 IEFL 188
++ L
Sbjct: 357 VKVL 360
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 185 IEFLSMK 191
+ LS K
Sbjct: 363 FKTLSDK 369
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 187 FLSMKLSAASMY 198
+SM A MY
Sbjct: 376 IMSM---GAGMY 384
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 18 GFFSNGSFFDHHQQPQLCMSFADNNIQSEALVVPSIGLIADFSH-----DTSNGKKAAAH 72
G + G F + P +S +D IQS G+ A++ + D S G K +
Sbjct: 85 GLYQQGGFHRQNSTPADFLSGSDGFIQS-------FGIQANYDYLSGNIDVSPGSKRS-R 136
Query: 73 TVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQA 132
+E+ + + G S TG+ +S N E ++E VRAKRG A
Sbjct: 137 EMEALFSSPEFTSQMKGEQSSGQVPTGVSSMS----DMNMENLMED-SVAFRVRAKRGCA 191
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
T S+AERVRR +I++R+R LQ+LVP K A ML+ + YV+ LQ QI+ L+
Sbjct: 192 THPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 185 IEFLS 189
++ LS
Sbjct: 419 VQTLS 423
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 185 IEFL 188
++ L
Sbjct: 352 VKVL 355
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 185 IEFLS 189
++ LS
Sbjct: 419 VQTLS 423
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP A MLD+ + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 185 IEFL 188
++ L
Sbjct: 363 VKTL 366
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSE 204
++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKL+ + D N E
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 54
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQDLVP A MLD+ + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 185 IEFL 188
++ L
Sbjct: 364 VKAL 367
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN-SELDTTE 209
++ LQDLVPGC K G A MLD IINYV+SLQ Q+EFLSMKL+A + DFN EL E
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 210 TMPG 213
P
Sbjct: 61 VFPA 64
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 54 GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSV------NNKGTGMQGLSGRK 107
L++ G++ A F+ +S T A G+ SV N + L GR+
Sbjct: 278 ALMSPVEDRKRKGREEEAECHSEFIAISITMAHGNQPQSVAIRQKTQNSADSSKPLQGRR 337
Query: 108 RKRNNERVVE----KPKEVIH--VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
N + E K+ I + +KR +A + H+L+ER RR++INE++R LQ+L+P C
Sbjct: 338 DAANPLKDAEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 397
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYY 199
K+ A MLD I Y++SLQ Q++ +SM S M +
Sbjct: 398 NKS-DKASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMF 434
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 185 IEFLS 189
++ LS
Sbjct: 279 VKTLS 283
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 185 IEFL 188
++ L
Sbjct: 357 VKAL 360
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 36 MSFADNNIQSEALVVPSI--GLIADFSHDTSNGKKAAAHTVESFMNLSPTPASGSGLLSV 93
+S ++N+ +P++ G+ FS + GK+ A +++ ++ T +SG V
Sbjct: 1472 LSATESNLTPATESLPTVTGGVFHTFSVPSRGGKEKAV-AIQTVCEIAGTSSSGVETEPV 1530
Query: 94 N-NKGTGMQGLSGRKRKRNNERV--VEKPKEVI-HVRAKRGQATDSHSLAERVRREKINE 149
T GR+RK E + ++ +E KR +A + H+LAER RREKINE
Sbjct: 1531 RIQPATETDIADGRERKEREETIAGIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINE 1590
Query: 150 RLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKL 192
+++ LQ+L+P C K+ ++ + DV I YV+SL+ QI+ M
Sbjct: 1591 KMKTLQELIPRCNKSTKVSTLEDV-IEYVKSLEMQIQHYVMNF 1632
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Query: 106 RKRKRNNERVVEKPKEVIHVRA----KRGQATDSHSLAERVRREKINERLRCLQDLVPGC 161
RK+K E +VE + R KR +A + H+LAER RREKINE+++ LQ+L+P C
Sbjct: 1114 RKQKEREETIVEI-QGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRC 1172
Query: 162 YKTMGMAVMLDVIINYVRSLQNQIEFLS 189
K+ ++ + DV I Y++SLQ QI+ +S
Sbjct: 1173 NKSTKVSTLEDV-IEYMKSLQMQIQMMS 1199
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+LAER RREKINE+++ LQ+L+P C K+ ++ LD I YV+ LQ+QI+
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVST-LDAAIEYVKWLQSQIQM 193
Query: 188 LSM 190
+ M
Sbjct: 194 ILM 196
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 109 KRNNERVVEKPKEVIHVRA----------KRGQATDSHSLAERVRREKINERLRCLQDLV 158
K E V +P ++ ++ KR + + H+LAER RREKINE ++ LQ+L+
Sbjct: 552 KAETEPVQIQPATIVEIQGTEEARGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELI 611
Query: 159 PGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
P C K+ ++ LD I YV+ LQ+QI+ +S
Sbjct: 612 PRCNKSTKVST-LDDAIEYVKWLQSQIQMMS 641
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 185 IEFL 188
++ L
Sbjct: 357 VKAL 360
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I++RLR LQDLVP K + MLD+ ++Y++ LQ+Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 185 IEFL 188
IE L
Sbjct: 360 IEKL 363
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 113 ERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
E++++ P V +RAKRG AT SLAERVRR +I+ER+R LQ++VP K + ML
Sbjct: 230 EKLLQFPDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEML 289
Query: 172 DVIINYVRSLQNQIEFLSMK 191
D+ + Y++ LQ Q++ +S K
Sbjct: 290 DLAVEYIKDLQKQLKTMSAK 309
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I++RLR LQDLVP K + MLD+ ++Y++ LQ+Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 185 IEFL 188
IE L
Sbjct: 355 IEKL 358
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK-TMGMAVMLDVIINYVRSLQN 183
VRAKRG AT S+AERVRR +I+ER+R LQ+LVP K T+ +A MLD + YV+SLQ
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 184 QIEFLS 189
Q++ L+
Sbjct: 528 QVQELA 533
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 187 FLSM 190
+SM
Sbjct: 376 IMSM 379
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 185 IEFL 188
++ L
Sbjct: 377 VKAL 380
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 185 IEFLS 189
+ LS
Sbjct: 331 YKTLS 335
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 185 IEFL 188
++ +
Sbjct: 360 VKVI 363
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
++R + H+L E+ RR KINERL+ LQ LVPGC K+ A LD I+Y++SLQ Q++
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 187 FLSMKLSAASMY 198
+S+ L+A ++Y
Sbjct: 247 AMSVGLAAPAVY 258
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Query: 86 SGSGLLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVR----AKRGQATDSHSLAER 141
S S LS+ K + +Q + R + E + KE R +KR ++ + H+L+ER
Sbjct: 292 SESPSLSLKRKHSDIQDIDCRHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSER 351
Query: 142 VRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYY 199
RR++INE++R LQ+L+P C K + A MLD I Y++SLQ Q++ +SM AS YY
Sbjct: 352 RRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQIMSM----ASGYY 404
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 185 IEFL 188
++ L
Sbjct: 382 VKGL 385
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P CYKT A MLD I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKT-DKASMLDEAIEYLKSLQLQLQV 241
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 242 MWMGGGMAPMLF 253
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 185 IEFL 188
++ +
Sbjct: 367 VKVI 370
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 185 IEFLSMKLSAASMYYDF 201
++ + K S+ + DF
Sbjct: 348 VK--NSKASSLGIEKDF 362
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 61/133 (45%), Gaps = 43/133 (32%)
Query: 75 ESFMNLSPTPASGSGL----LSVNNKG-------TGMQGLSGRKRKRNNERVVEKPKEVI 123
E+ +N +P G+ LS + G G G G + + + E PK+ I
Sbjct: 217 ETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYI 276
Query: 124 HVRAKRGQATDSHSLAER--------------------------------VRREKINERL 151
HVRA+RGQATDSHSLAER VRREKI+ER+
Sbjct: 277 HVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERM 336
Query: 152 RCLQDLVPGCYKT 164
+ LQDLVPGC K
Sbjct: 337 KLLQDLVPGCNKV 349
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+ER RR++INE++R LQ+L+P C K+ A MLD I Y++SLQ Q++
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 415
Query: 188 LSMKLSAASMYY 199
+SM S M +
Sbjct: 416 MSMGCSMVPMMF 427
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 185 IEFL 188
++ +
Sbjct: 387 VKVM 390
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR ++++ H+L+ER RR++INE++R LQ+LVP C K + A ML+ +I Y++SLQ Q++
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 188 LSM 190
+SM
Sbjct: 277 MSM 279
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 109 KRNNERVVEKPKEVIH--------VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
KR E +V+ EV +R +A + H+L+ER RR++INE+LR LQ+LVP
Sbjct: 198 KRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPH 257
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD-------TTETMPG 213
C KT A +LD I Y++SLQ Q++ + M M + +L T MPG
Sbjct: 258 CNKT-DKASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPG 316
Query: 214 TNECDAQDMERMVREGY 230
AQ + +M R Y
Sbjct: 317 ---AQAQGLNQMQRTTY 330
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 185 IEFL 188
++ L
Sbjct: 378 VKGL 381
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLS 193
++ LQDLVPGC K G AVMLD IINYV+SLQ Q+EFLSMKLS
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLS 43
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQDL P K A MLD+ + Y++ LQ Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 185 IEFL 188
++ L
Sbjct: 410 VKTL 413
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAA-SMYYDF 201
++ LQ LVPGC+K G A MLD IINYV+SLQNQ+EFLSMKL++ + YDF
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDF 52
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 185 IEFL 188
++ L
Sbjct: 254 VKAL 257
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 109 KRNNERVVEKPKEVIH--------VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
KR E +V+ EV +R +A + H+L+ER RR++INE+LR LQ+LVP
Sbjct: 195 KRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPH 254
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD-------TTETMPG 213
C KT A +LD I Y++SLQ Q++ + M M + +L T MPG
Sbjct: 255 CNKT-DKASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPG 313
Query: 214 TNECDAQDMERMVREGY 230
AQ + +M R Y
Sbjct: 314 AQ---AQGLNQMQRTTY 327
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR KI+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 185 IEFL 188
++ +
Sbjct: 384 VKVM 387
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
++ LQDLVPGC K +G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF++
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 53
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRG ATD S+ R RREKINERL+ LQ+LVP K + + MLD I+YV+ LQ Q+
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQV 501
Query: 186 EFL 188
E L
Sbjct: 502 ELL 504
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 109 KRNNERVVEKPKEVIH--------VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
KR E +V+ EV +R +A + H+L+ER RR++INE+LR LQ+LVP
Sbjct: 199 KRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPH 258
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD-------TTETMPG 213
C KT A +LD I Y++SLQ Q++ + M M + +L T MPG
Sbjct: 259 CNKT-DKASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPG 317
Query: 214 TNECDAQDMERMVREGY 230
AQ + +M R Y
Sbjct: 318 ---AQAQGLNQMQRTTY 331
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
++ LQDLVPGC K +G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF++
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 53
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y++SLQ Q++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 187 FLSMKLSAASMYY 199
+SM AS YY
Sbjct: 398 IMSM----ASGYY 406
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 185 IEFL 188
+ L
Sbjct: 345 YKIL 348
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNS 203
++ LQDLVPGC K +G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF++
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 53
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 109 KRNNERVVEKPKEVIH--------VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
KR E +V+ EV +R +A + H+L+ER RR++INE+LR LQ+LVP
Sbjct: 374 KRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPH 433
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD-------TTETMPG 213
C KT A +LD I Y++SLQ Q++ + M M + +L T MPG
Sbjct: 434 CNKT-DKASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPG 492
Query: 214 TNECDAQDMERMVREGY 230
AQ + +M R Y
Sbjct: 493 AQ---AQGLNQMQRTTY 506
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 185 IEFL 188
++ L
Sbjct: 129 VKGL 132
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 185 IE 186
++
Sbjct: 422 VK 423
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER++ LQDL P K A MLD+ + Y++ LQ +
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 185 IEFLS 189
++ LS
Sbjct: 426 VKILS 430
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 109 KRNNERVVEKPKEVIH--------VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
KR E +V+ EV +R +A + H+L+ER RR++INE+LR LQ+LVP
Sbjct: 298 KRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPH 357
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD-------TTETMPG 213
C KT A +LD I Y++SLQ Q++ + M M + +L T MPG
Sbjct: 358 CNKT-DKASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACMPG 416
Query: 214 TNECDAQDMERMVREGY 230
AQ + +M R Y
Sbjct: 417 AQ---AQGLNQMQRTTY 430
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAKRG AT S+AERVRR KI+ER++ LQDLVP K + MLD + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 183 NQIEFLS 189
+++ LS
Sbjct: 90 RKVQELS 96
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRG AT S+AERVRR +I+ER+R LQDLVP K + MLD+ ++Y++ LQ Q+
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 186 EFLS 189
+ LS
Sbjct: 93 QTLS 96
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 129 RGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
R ++H L E+ RR KINERL+ LQ LVPGC K+ A LD I+Y++SLQ Q++ +
Sbjct: 168 RSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQQQVQAM 226
Query: 189 SMKLSAASMY 198
S+ L+A ++Y
Sbjct: 227 SVGLAAPAVY 236
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 129 RGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
R ++H+L E+ RR KINERL+ LQ LVPGC K+ A LD I+Y++SLQ+Q++ +
Sbjct: 162 RSHHGEAHNLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAM 220
Query: 189 SMKLSAASMY 198
S+ L++ ++Y
Sbjct: 221 SVGLASPAVY 230
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RA RG AT S+AERVRR KI+ER++ LQDLVP + A MLD + YV+ LQ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 185 IEFLS 189
++ LS
Sbjct: 123 VQELS 127
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
ER+++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQ+LVP K + M
Sbjct: 278 ERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDM 337
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQNQI+ L
Sbjct: 338 LDLAVQHIKGLQNQIQVL 355
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 185 IEFL 188
+ L
Sbjct: 339 YKIL 342
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAKRG AT S+AERVRR +I+ER++ LQDLVP KT + MLD + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 183 NQIEFLS 189
+++ L+
Sbjct: 61 MKVKELT 67
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 185 IEFL 188
+ L
Sbjct: 339 YKIL 342
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+ER RR++INER++ LQ+L+P C K+ A MLD I Y++SLQ QI+
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 339
Query: 188 LSM 190
+SM
Sbjct: 340 MSM 342
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAA-SMYYDF 201
++ LQ LVPGC+K G A+MLD IINYV+SLQNQ+EFLSMKL++ + +DF
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDF 52
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ +NYV+ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQLQ 322
Query: 185 IEFLS 189
I+ LS
Sbjct: 323 IKLLS 327
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
V KR +A + H+L+ER RR++INER++ LQ+L+P C K+ A MLD I Y++SL
Sbjct: 204 VSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSL 262
Query: 182 QNQIEFLSM 190
Q QI+ +SM
Sbjct: 263 QLQIQMMSM 271
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
ATD HS+AER+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
V KR +A + H+L+ER RR++INER++ LQ+L+P C K+ A MLD I Y++SL
Sbjct: 204 VSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSL 262
Query: 182 QNQIEFLSM 190
Q QI+ +SM
Sbjct: 263 QLQIQMMSM 271
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+ER RR++INER++ LQ+L+P C K+ A MLD I Y++SLQ QI+
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 339
Query: 188 LSM 190
+SM
Sbjct: 340 MSM 342
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ +NYV+ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQLQ 319
Query: 185 IEFLS 189
I+ LS
Sbjct: 320 IKLLS 324
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ + Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 185 IEFLS 189
+ LS
Sbjct: 331 YKTLS 335
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD+ ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 185 IEFL 188
+ L
Sbjct: 360 YKIL 363
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y++SLQ Q++
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 187 FLSMKLSAASMYY 199
+SM AS YY
Sbjct: 398 IMSM----ASGYY 406
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E++++ P++ + VRAKRG AT S+AER RR +I+ +L+ LQDLVP K A M
Sbjct: 265 EKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADM 324
Query: 171 LDVIINYVRSLQNQIEFLSMKL 192
LD+ + +++ LQN+++ L+ +L
Sbjct: 325 LDLAVQHIKGLQNEVQKLNKEL 346
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RREKINERLR LQ+LVP K + ++ ML+ I+YV+ LQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 256
Query: 185 IEFLS 189
I+ LS
Sbjct: 257 IKLLS 261
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ + Y++ LQ Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 185 IEFLS 189
L+
Sbjct: 370 YNTLT 374
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ + Y++ LQ Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 185 IEFLS 189
L+
Sbjct: 381 YNTLT 385
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+L P K A MLD+ + Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 185 IEFL 188
++ L
Sbjct: 393 VKTL 396
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A MLD + YV+ LQ Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 185 IEFLS 189
IE LS
Sbjct: 141 IEELS 145
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E++++ P++ + VRAKRG AT S+AER RR +I+ +L+ LQDLVP K A M
Sbjct: 318 EKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADM 377
Query: 171 LDVIINYVRSLQNQIEFLSMKL 192
LD+ + +++ LQN+++ L+ +L
Sbjct: 378 LDLAVQHIKGLQNEVQKLNKEL 399
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ ++Y++ LQ Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 185 IEFLS 189
+ LS
Sbjct: 90 YKTLS 94
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RREKINERLR LQ+LVP K + ++ ML+ I+YV+ LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 242
Query: 185 IEFLS 189
I+ LS
Sbjct: 243 IKLLS 247
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 425
Query: 187 FLSM 190
+SM
Sbjct: 426 IMSM 429
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 489
Query: 187 FLSM 190
+SM
Sbjct: 490 IMSM 493
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 120 KEVIH--VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
K+ +H KR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I Y
Sbjct: 250 KKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEY 308
Query: 178 VRSLQNQIEFLSMKLSAASMYY 199
++SLQ Q++ +SM M +
Sbjct: 309 LKSLQLQVQMMSMGYGMVPMMF 330
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
KR +A + H+L+ER RR++INER++ LQ+L+P C K+ A MLD I Y++SLQ QI+
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 347
Query: 187 FLSM 190
+SM
Sbjct: 348 VMSM 351
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTET 210
++ LQ LVPGC K G A+MLD IINYV+SLQ Q+EFLSMKL+ + DF+S
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHY----- 55
Query: 211 MPGTNECDAQDMERMVREGY 230
MP ++DM M Y
Sbjct: 56 MP------SKDMSHMPVPAY 69
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K A MLD+ + Y++ LQ Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 185 IEFLS 189
L+
Sbjct: 256 YNTLT 260
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 120 KEVIHVR---AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
K+ H R +KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I
Sbjct: 441 KKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIE 499
Query: 177 YVRSLQNQIEFLSM 190
Y+++LQ Q++ +SM
Sbjct: 500 YLKTLQLQVQMMSM 513
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E++++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K A M
Sbjct: 249 EKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADM 308
Query: 171 LDVIINYVRSLQNQIEFLSMKLSAAS 196
L++ + +++ LQN++E L +L +
Sbjct: 309 LELAVKHIKGLQNEVEKLHKELEGCT 334
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 106 RKRKRNNERVVE---KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
RKRK E VE + +KR +A H L+ER RR+KINE ++ LQ+L+P C
Sbjct: 249 RKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCT 308
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSM 190
KT + MLD +I YV+SLQ+QI+ SM
Sbjct: 309 KT-DRSSMLDDVIEYVKSLQSQIQMFSM 335
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
Query: 88 SGLLSVNNKGTGMQGLSGRKRKRNNERVV------EKP-------KEVIHVRAKRGQATD 134
S + S N GTG S R++KR + + P + AKR + +
Sbjct: 328 SSVCSGNGAGTGKDDESWRQQKRKTLQAECSASQDDDPDDESGGMRRSCSRGAKRSRTAE 387
Query: 135 SHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++ +SM
Sbjct: 388 VHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 442
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 519
Query: 187 FLSM 190
+SM
Sbjct: 520 IMSM 523
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAKRG AT S+AERVRR +I+ER++ LQDLVP KT A MLD + YV+SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 183 NQIEFL 188
++ L
Sbjct: 63 VKVSEL 68
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 117 EKPKEVIHVR----AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
E P+ VR KR A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD
Sbjct: 258 ESPEAKKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLD 316
Query: 173 VIINYVRSLQNQIEFLSMKLSAASMYY 199
I Y++SLQ Q++ +SM M +
Sbjct: 317 EAIEYLKSLQLQVQMMSMGCGMVPMIF 343
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522
Query: 187 FLSM 190
+SM
Sbjct: 523 MMSM 526
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
ER+++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQ+LVP K + M
Sbjct: 278 ERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDM 337
Query: 171 LDVIINYVRSLQNQIEFLSMKL 192
LD+ + +++ LQNQI+ L+ ++
Sbjct: 338 LDLAVQHIKGLQNQIQKLNKEV 359
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI-- 185
KR +A + H+LAER RREKINER++ LQ L+P C K+ ++ ML+ +I YV+SL+ QI
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQINQ 205
Query: 186 --EFLSMKLSAASMYYDFNSE 204
++M ++ Y F S+
Sbjct: 206 FMPHMAMGMNQPPAYIPFPSQ 226
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 187 FLSM 190
+SM
Sbjct: 517 IMSM 520
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 501
Query: 187 FLSM 190
+SM
Sbjct: 502 IMSM 505
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 187 FLSM 190
+SM
Sbjct: 517 IMSM 520
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 39/52 (75%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
++ LQDLVPGC G A MLD IINYV+SLQ Q+EFLSMKL+A + DFN
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 52
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 120 KEVIHVR-----AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
K +H R KR ++T+ H L ER RR++ N+++R LQD++P CYK A +LD
Sbjct: 210 KTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYKD-DKASLLDEA 268
Query: 175 INYVRSLQNQIEFLSM 190
+ Y+R+LQ+Q++ +SM
Sbjct: 269 VKYMRTLQHQVQMMSM 284
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A MLD + YV+ LQ
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 184 QIEFLS 189
QI+ L+
Sbjct: 229 QIQELT 234
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 511
Query: 187 FLSM 190
+SM
Sbjct: 512 IMSM 515
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+L P K A MLD+ + Y++ LQ Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 185 IEFL 188
++ L
Sbjct: 231 VKTL 234
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 380
Query: 187 FLSM 190
+SM
Sbjct: 381 IMSM 384
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 120 KEVIHVRA-----KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
K +H R KR ++T+ H L ER RR++ N+++R LQDL+P CYK A +LD
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKD-DKASLLDEA 271
Query: 175 INYVRSLQNQIEFLSM 190
I Y+R+LQ Q++ +SM
Sbjct: 272 IKYMRTLQLQVQMMSM 287
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
+G G+ GL + + E V + VRAKRG AT S+AERVRR +I++R+R LQ
Sbjct: 159 QGGGISGLLDAEMDKLAEDSV-----LCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 213
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
+LVP K A ML+ + YV+ LQ QI+ L+
Sbjct: 214 ELVPNMDKQTNTADMLEEAVEYVKFLQKQIQELT 247
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ Q++
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 286
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 287 MWMTTGMAPMMF 298
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 120 KEVIHVRA-----KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
K +H R KR ++T+ H L ER RR++ N+++R LQDL+P CYK A +LD
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKD-DKASLLDEA 271
Query: 175 INYVRSLQNQIEFLSM 190
I Y+R+LQ Q++ +SM
Sbjct: 272 IKYMRTLQLQVQMMSM 287
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
H +R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDETIEYLKSLQM 281
Query: 184 QIEFLSMKLSAASMYY 199
Q++ + M A M +
Sbjct: 282 QVQIMWMTSGMAPMMF 297
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 324
Query: 185 IEFLS 189
I+ LS
Sbjct: 325 IKLLS 329
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ + YV++LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 185 IEFLS 189
I+ L+
Sbjct: 241 IQELT 245
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDT 207
++ LQDLVPGC K +G A++LD IINY++SLQ Q+EFLSMKL A NS L+T
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV------NSRLNT 51
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ Q++
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 275
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 276 MWMTTGMAPMMF 287
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 235
Query: 187 FLSM 190
+SM
Sbjct: 236 MMSM 239
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 323
Query: 185 IEFLS 189
I+ LS
Sbjct: 324 IKLLS 328
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+N KPK RA RG ATD SL R RRE+INERLR LQ LVP K + ++ M
Sbjct: 227 DNNNASPKPK----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTM 281
Query: 171 LDVIINYVRSLQNQIEFLS 189
L+ ++YV+ LQ QI+ LS
Sbjct: 282 LEEAVHYVKFLQLQIKLLS 300
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 263 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 321
Query: 185 IEFLS 189
I+ LS
Sbjct: 322 IKLLS 326
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 324
Query: 185 IEFLS 189
I+ LS
Sbjct: 325 IKLLS 329
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 345
Query: 185 IEFLS 189
I+ LS
Sbjct: 346 IKLLS 350
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 111 NNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+N KPK RA RG ATD SL R RRE+INERLR LQ LVP K + ++ M
Sbjct: 227 DNNNASPKPK----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTM 281
Query: 171 LDVIINYVRSLQNQIEFLS 189
L+ ++YV+ LQ QI+ LS
Sbjct: 282 LEEAVHYVKFLQLQIKLLS 300
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD I Y+++LQ Q++
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKT-DKASMLDEAIEYLKTLQLQVQM 371
Query: 188 LSMKLSAASMYY 199
+SM M +
Sbjct: 372 MSMGCGMMPMMF 383
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 115 VVEKPKEVIHVR--AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
V E P E + R +KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD
Sbjct: 107 VAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLD 165
Query: 173 VIINYVRSLQNQIEFLSMK 191
I Y++ LQ Q++ L+M+
Sbjct: 166 EAIEYLKQLQLQVQMLTMR 184
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 345
Query: 185 IEFLS 189
I+ LS
Sbjct: 346 IKLLS 350
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ + YV+ LQ
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 184 QIEFL 188
QIE L
Sbjct: 143 QIEEL 147
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AER RR +I+ER++ LQDL P K A MLD+ + +++ LQ Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 185 IEFLS 189
++ LS
Sbjct: 421 VQILS 425
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQTQ 332
Query: 185 IEFLSM 190
I+ ++
Sbjct: 333 IKVCTI 338
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
KP + + A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y
Sbjct: 24 KPPQKL-TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEY 81
Query: 178 VRSLQNQIEFLSM 190
+++LQ Q++ + M
Sbjct: 82 LKTLQMQVQMMWM 94
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ Q++
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 375
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 376 MWMTTGMAPMMF 387
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 185 IEFLS 189
I+ L+
Sbjct: 238 IQELT 242
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+ KP + + A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD
Sbjct: 313 LARKPPQKM-TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEA 370
Query: 175 INYVRSLQNQIEFLSM 190
I Y++SLQ Q++ + M
Sbjct: 371 IEYLKSLQLQVQMMWM 386
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ Q++
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 391
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 392 MWMTTGMAPMMF 403
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
RA RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ + YV+ LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 312
Query: 184 QIEFLS---MKLSAASMYYDFNSELDTTETMP 212
QI+ LS + + A Y + LD +MP
Sbjct: 313 QIKLLSSDDLWMYAPLAYNGMDIGLDLKISMP 344
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+++ER RR++INE++R LQ+LVP C KT A +LD I Y++SLQ Q++
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 303
Query: 188 LSMKLSAASMYYDFNSELDTTETM 211
+ M A M +L TM
Sbjct: 304 MWMSTGMAPMMIPGAHQLMPPMTM 327
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ ++YV+ LQ Q
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 185 IEFLS 189
I+ L+
Sbjct: 248 IQELT 252
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
RA RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ + YV+ LQ
Sbjct: 253 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 311
Query: 184 QIEFLS---MKLSAASMYYDFNSELDTTETMP 212
QI+ LS + + A Y + LD +MP
Sbjct: 312 QIKLLSSDDLWMYAPLAYNGMDIGLDLKISMP 343
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAISYLKSLQLQVQM 363
Query: 188 LSM 190
+SM
Sbjct: 364 MSM 366
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RAKRG AT S+AER RR +I++RL+ LQDLVP K + MLD+ + Y++ LQ Q
Sbjct: 93 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 152
Query: 185 IEFL 188
+E L
Sbjct: 153 VEKL 156
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
RA RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ + YV+ LQ
Sbjct: 258 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 316
Query: 184 QIEFLS---MKLSAASMYYDFNSELDTTETMP 212
QI+ LS + + A Y + LD +MP
Sbjct: 317 QIKLLSSDDLWMYAPLAYNGMDIGLDLKISMP 348
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+ KP + + A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD
Sbjct: 318 LARKPPQKM-TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEA 375
Query: 175 INYVRSLQNQIEFLSM 190
I Y++SLQ Q++ + M
Sbjct: 376 IEYLKSLQLQVQMMWM 391
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+ KP + + A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD
Sbjct: 318 LARKPPQKM-TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEA 375
Query: 175 INYVRSLQNQIEFLSM 190
I Y++SLQ Q++ + M
Sbjct: 376 IEYLKSLQLQVQMMWM 391
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+L P K A MLD+ + +++ LQ Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 185 IEFLS 189
++ L+
Sbjct: 397 VKTLT 401
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 245
Query: 185 IEFLS 189
I+ LS
Sbjct: 246 IKLLS 250
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RAKRG AT S+AER RR +I++RL+ LQDLVP K + MLD+ + Y++ LQ Q
Sbjct: 156 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 215
Query: 185 IEFL 188
+E L
Sbjct: 216 VEKL 219
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P+ +R ++ D H+ +ER RR++INE+LR LQ+L+P C KT ++ MLD I+Y+
Sbjct: 8 PRRSTPAPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVS-MLDEAIDYL 66
Query: 179 RSLQNQIEFLSM 190
+SLQ Q++ L M
Sbjct: 67 KSLQLQLQMLVM 78
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 245
Query: 185 IEFLS 189
I+ LS
Sbjct: 246 IKLLS 250
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 118 KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINY 177
KP + + A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y
Sbjct: 303 KPPQKL-TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEY 360
Query: 178 VRSLQNQIEFLSM 190
+++LQ Q++ + M
Sbjct: 361 LKTLQMQVQMMWM 373
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ ++YV+ LQ QI
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 275
Query: 186 EFLS---MKLSAASMYYDFNSELD 206
+ LS M + A Y N LD
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLD 299
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 187 FLSM 190
+ M
Sbjct: 373 MMWM 376
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ LVP K A MLD+ ++++R LQN+
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 185 IEFL 188
++ L
Sbjct: 203 LQAL 206
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 187 FLSM 190
+ M
Sbjct: 373 MMWM 376
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 118 KPKEV-IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+P V RAKRG AT S+AER RR +I++RL+ LQDLVP K + MLD+ +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 177 YVRSLQNQIEFL 188
Y++ LQ Q+E L
Sbjct: 361 YIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 118 KPKEV-IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+P V RAKRG AT S+AER RR +I++RL+ LQDLVP K + MLD+ +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 177 YVRSLQNQIEFL 188
Y++ LQ Q+E L
Sbjct: 361 YIKELQGQVEKL 372
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 188 LSM 190
+SM
Sbjct: 368 MSM 370
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 93 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 151
Query: 185 IEFLS 189
I+ LS
Sbjct: 152 IKLLS 156
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQ 322
Query: 185 IEFLS 189
I+ LS
Sbjct: 323 IKLLS 327
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQI 243
Query: 186 EFLS 189
+ LS
Sbjct: 244 KLLS 247
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA+RG ATD S+ R RREKINERL+ LQ LVP K + + MLD I+YV+ LQ Q+
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQV 501
Query: 186 EFLSMKLSAASMYYDFNSE--LDTTETMPGT 214
L K MY N+ +D T + P T
Sbjct: 502 TLL--KSDEYWMYATPNTYKGIDLTNSPPQT 530
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E+++ P++ + +RAKRG AT S+AER RR +I+ RL+ LQDLVP K A M
Sbjct: 285 EKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADM 344
Query: 171 LDVIINYVRSLQNQIEFLSMKL 192
LD+ + +++ LQ +++ L +L
Sbjct: 345 LDLAVQHIKGLQGEVQKLHKEL 366
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD S+ R RRE+INERLR LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 265
Query: 185 IEFLS 189
I+ LS
Sbjct: 266 IKLLS 270
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 353
Query: 187 FLSM 190
+ M
Sbjct: 354 MMWM 357
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 188 LSM 190
+SM
Sbjct: 440 MSM 442
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A +LD I Y++SLQ Q++
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDETIEYLKSLQMQVQI 379
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 380 MWMTSGMAPMMF 391
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I++R++ LQ L P K A MLD+ + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 185 IEFLS 189
++ L+
Sbjct: 382 VQILT 386
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 188 LSM 190
+SM
Sbjct: 461 MSM 463
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 188 LSM 190
+SM
Sbjct: 496 MSM 498
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I++R++ LQ L P K A MLD+ + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 185 IEFLS 189
++ L+
Sbjct: 379 VQILT 383
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Query: 80 LSPTPASGSG------LLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQAT 133
L P ASGSG L+ K +Q G+ + P VRA+RGQAT
Sbjct: 73 LKPDEASGSGKRFREDLVDTRPKNF-LQTFHGQPMPTTVPAAPQPPAMRPRVRARRGQAT 131
Query: 134 DSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
D HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q++ LSM
Sbjct: 132 DPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 187
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
VRA+RG AT S+AER RR +I++RL+ LQDLVP K + MLD+ ++Y++ L
Sbjct: 277 ACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKEL 336
Query: 182 QNQIEFL 188
++Q+E L
Sbjct: 337 KDQVEKL 343
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ ++YV+ LQ QI
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQI 296
Query: 186 EFLS 189
+ LS
Sbjct: 297 KLLS 300
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA +G ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 282
Query: 185 IEFLS 189
I+ LS
Sbjct: 283 IKLLS 287
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 188 LSM 190
+SM
Sbjct: 508 MSM 510
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDISTMLEEAVQYVKFLQLQI 306
Query: 186 EFLS 189
+ LS
Sbjct: 307 KLLS 310
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
++E+ + A+R +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD
Sbjct: 250 LIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEA 308
Query: 175 INYVRSLQNQIEFLSM 190
I Y+++LQ Q++ + M
Sbjct: 309 IEYLKTLQMQVQMMWM 324
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
KR +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I Y+++LQ Q++
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 187 FLSMKLSAASMYY 199
+SM M +
Sbjct: 356 MMSMGCGMVPMMF 368
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
KR +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I Y+++LQ Q++
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 187 FLSMKLSAASMYY 199
+SM M +
Sbjct: 360 MMSMGCGMVPMMF 372
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AERVRR +I++R+R LQ++VP K A ML+ + YV+ LQ Q
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQ 227
Query: 185 IEFLS 189
I+ L+
Sbjct: 228 IQELT 232
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ + YV+ LQ
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 184 QIEFLS 189
+I+ LS
Sbjct: 234 KIQELS 239
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
+R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSD 57
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I++RL+ LQDLVP K + MLD+ ++Y++ L+++
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 185 IEFL 188
+E L
Sbjct: 341 VEKL 344
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ+LVP K A MLD+ + +++ LQ+Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 185 IEFL 188
++ L
Sbjct: 201 LQAL 204
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 80 LSPTPASGSG------LLSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQAT 133
L P ASGSG L+ K T G+ + P VRA+RGQAT
Sbjct: 73 LKPDEASGSGKRFREDLVDTRPKNT----FHGQPMPTTVPAAPQPPAMRPRVRARRGQAT 128
Query: 134 DSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
D HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q++ LSM
Sbjct: 129 DPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 184
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQDLVP K A MLD+ + +++ LQ++
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 185 IEFL 188
++ L
Sbjct: 322 LQAL 325
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
+ RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAAQYVKFLQL 247
Query: 184 QIEFLS 189
QI+ LS
Sbjct: 248 QIKLLS 253
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E+P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I
Sbjct: 18 EQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIE 76
Query: 177 YVRSLQNQIEFLSMK 191
Y++ LQ Q++ LSM+
Sbjct: 77 YLKQLQLQVQMLSMR 91
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQLQ 295
Query: 185 IEFLS 189
I+ LS
Sbjct: 296 IKLLS 300
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 108 RKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ--DLVPGCYKTM 165
R R+ R+V + A+R +A + H+L+ER RR++INE++R LQ +L+P C KT
Sbjct: 143 RTRSRSRLVARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKT- 201
Query: 166 GMAVMLDVIINYVRSLQNQIEFLSM 190
A MLD I Y++SLQ Q+ + M
Sbjct: 202 DKASMLDEAIEYLKSLQLQLRVMWM 226
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 323
Query: 187 FLSM 190
+ M
Sbjct: 324 MMWM 327
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 68 KAAAHTVESFMNLSPTPASGS------GLL--SVNNKGTGMQGLSGRKRKRNNERVVEKP 119
+++ E+ N+ P S S GL+ NN+ + + + G + + E P
Sbjct: 131 RSSLEVSENTRNVRKCPKSASMSNNEEGLMWNGTNNRFSHVDSIGGIISSSLSPKEHEAP 190
Query: 120 KEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVR 179
K RA ATD+ S+ R RRE+INERLR LQ LVP K + ++ ML+ + YV+
Sbjct: 191 KLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVK 249
Query: 180 SLQNQIEFLS---MKLSAASMYYDFNSELDTTETMP 212
LQ QI+ LS M + A Y N LD + + P
Sbjct: 250 FLQLQIKLLSSEDMWMYAPIAYNGMNIGLDLSFSSP 285
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E+P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I
Sbjct: 40 EQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIE 98
Query: 177 YVRSLQNQIEFLSMK 191
Y++ LQ Q++ LSM+
Sbjct: 99 YLKQLQLQVQMLSMR 113
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 323
Query: 187 FLSM 190
+ M
Sbjct: 324 MMWM 327
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQLQ 295
Query: 185 IEFLS 189
I+ LS
Sbjct: 296 IKLLS 300
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
KG G R E E H +R +A + H+ +ER RR++INE++R LQ
Sbjct: 200 KGRGRDDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQ 259
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYY 199
+L+P C K A +LD I Y++SLQ Q++ + M A M +
Sbjct: 260 ELIPHCNKA-DKASILDEAIEYLKSLQMQLQIMWMTTGMAPMMF 302
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E+P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I
Sbjct: 40 EQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIE 98
Query: 177 YVRSLQNQIEFLSMK 191
Y++ LQ Q++ LSM+
Sbjct: 99 YLKQLQLQVQMLSMR 113
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 332
Query: 187 FLSM 190
+ M
Sbjct: 333 MMWM 336
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ
Sbjct: 236 KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 184 QIEFLS 189
QI+ LS
Sbjct: 295 QIKLLS 300
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAAS-MYYDFNSELD 206
+R LQ LVPGC K G A++LD IINYV+SLQNQ+EFLSM++++ S + Y F + D
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSD 57
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RA RG AT S+AERVRR KI+ER++ LQ+LVP + A MLD + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 185 IEFLS 189
++ L+
Sbjct: 439 VQELT 443
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 105 GRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
GR+ + + ER +++ R + + + +HSL ER RR KINE L+ LQ LVPGC K+
Sbjct: 98 GRRSESSKER-----RKITRAR-RSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKS 151
Query: 165 MGMAVMLDVIINYVRSLQNQIEFLS----MKLSAASMYY 199
A LD I Y++SLQ ++ +S MK +AA + Y
Sbjct: 152 NNQASTLDKTIRYMKSLQQHVQAMSVGCIMKPAAAGVSY 190
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG +TD SL R RRE+INERL+ LQ LVP K + M+ ML+ ++YV+ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQLQ 273
Query: 185 IEFLS---MKLSAASMYYDFNSELD 206
I+ LS M + A Y N LD
Sbjct: 274 IKVLSSDDMWMYAPLAYNGMNIGLD 298
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ LVP K + MLD+ +++++ LQ+Q
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 344
Query: 185 IEFL 188
++ L
Sbjct: 345 LQTL 348
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AER RR +I+ R++ LQDL P K A MLD+ + Y++ LQ Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 185 IEFL 188
++ L
Sbjct: 420 VKIL 423
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQDLVP K + MLD+ + +++ LQ+Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 185 IEFL 188
++ +
Sbjct: 301 LQAM 304
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R ++ D H+ +ER RR++INE+LR LQ+L+P C KT ++ MLD I+Y++SLQ Q++
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 74
Query: 188 LSM 190
L M
Sbjct: 75 LVM 77
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A ML+ + YV+ LQ
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 184 QIEFLS 189
+I+ LS
Sbjct: 164 KIQELS 169
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHISTMLEEAVQYVKFLQLQ 295
Query: 185 IEFLS 189
I+ LS
Sbjct: 296 IKLLS 300
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A H+L+ER RR++INE++R LQ+LVP C KT A MLD I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKT-DKASMLDEAIEYLKSLQLQLQ 291
Query: 187 FL 188
+
Sbjct: 292 VM 293
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA +G ATD SL R RREKINERL+ LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 225
Query: 185 IEFLS 189
I+ LS
Sbjct: 226 IKLLS 230
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 188 LSM 190
++M
Sbjct: 408 MAM 410
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 122 VIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSL 181
VRA+RG AT S+AER RR +I++RL+ LQDLVP K + MLD+ + Y++ L
Sbjct: 149 ACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKEL 208
Query: 182 QNQIEFL 188
++Q+E L
Sbjct: 209 KDQVEKL 215
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA +G ATD SL R RREKINERL+ LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 225
Query: 185 IEFLS 189
I+ LS
Sbjct: 226 IKLLS 230
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AER RR +I+ R++ LQDL P K A MLD+ + Y++ LQ Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 185 IEFL 188
++ L
Sbjct: 416 VKML 419
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT AVMLD I++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAVMLDEIVDYVKFLRLQ 181
Query: 185 IEFLSM 190
++ LSM
Sbjct: 182 VKVLSM 187
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INE++R LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQV 89
Query: 188 LSM 190
+ M
Sbjct: 90 MWM 92
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ ++YV LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQLQ 330
Query: 185 IEFLS 189
I+ LS
Sbjct: 331 IKLLS 335
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R++RG ATD S+ R RREKINERL+ LQ+LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 305
Query: 186 EFLS 189
+ LS
Sbjct: 306 KLLS 309
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R+ RG ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
Query: 186 EFLS 189
+ LS
Sbjct: 284 KLLS 287
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R ++ + H+ +ER RR+KINE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVS-MLDEAIDYLKSLQLQLQ 72
Query: 187 FLSM 190
L M
Sbjct: 73 MLVM 76
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
KR + + H+LAER RREKINE+++ LQ L+P C K+ ++ LD I YV+SLQ+QI+
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQ 309
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
KG G R E E H +R +A + H+ +ER RR++INE++R LQ
Sbjct: 171 KGRGKDDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQ 230
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTN 215
+L+P C K A +LD I Y++SLQ Q++ + M A M + + + + +
Sbjct: 231 ELIPHCNKA-DKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPGSHQFMPPMAVGMNS 289
Query: 216 EC--DAQDMERMVREGY 230
C AQ + +M R Y
Sbjct: 290 ACLPAAQGLNQMARVPY 306
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 96 KGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQ 155
KG G R E E H +R +A + H+ +ER RR++INE++R LQ
Sbjct: 162 KGRGKDDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQ 221
Query: 156 DLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELDTTETMPGTN 215
+L+P C K A +LD I Y++SLQ Q++ + M A M + + + + +
Sbjct: 222 ELIPHCNKA-DKASILDEAIEYLKSLQMQVQVMWMTSGMAPMMFPGSHQFMPPMAVGMNS 280
Query: 216 EC--DAQDMERMVREGY 230
C AQ + +M R Y
Sbjct: 281 ACLPAAQGLNQMARVPY 297
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ LVP K A MLD+ ++++R LQ++
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 185 IEFL 188
++ L
Sbjct: 206 LQAL 209
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 113 ERVVEKPKEVIHVRA--KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E+ VE K V R+ KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A M
Sbjct: 105 EKSVEASKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASM 163
Query: 171 LDVIINYVRSLQNQIEFL 188
LD I Y++ LQ Q+++L
Sbjct: 164 LDEAIEYLKQLQLQVQYL 181
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ LVP K + MLD+ +++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 185 IEFL 188
++ L
Sbjct: 194 LQTL 197
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA+RG AT S+AER RR +I+ER++ LQDLVP K A MLD + YV+ LQ Q
Sbjct: 15 TRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQ 74
Query: 185 IEFLS 189
++ LS
Sbjct: 75 VKDLS 79
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR + + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 188 LSM 190
++M
Sbjct: 218 MAM 220
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR + + H+L+ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 187 FLSM 190
+SM
Sbjct: 390 MMSM 393
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRG ATD S+ R RRE+INERLR LQ LVP K + + ML+ INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFLQLQL 296
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 113 ERVVEKPKEVIH-VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVML 171
E+ + + V H +RAKRG AT S+AER+RR +I+ER++ LQ+L P K A ML
Sbjct: 329 EKFLRFQEPVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADML 388
Query: 172 DVIINYVRSLQNQIEFLS 189
++ + Y++ LQ Q++ L+
Sbjct: 389 ELAVEYIKGLQRQVKTLT 406
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR + + H+L+ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 187 FLSM 190
+SM
Sbjct: 390 MMSM 393
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E+++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K A M
Sbjct: 63 EKLLHVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADM 122
Query: 171 LDVIINYVRSLQNQIEFLSMKL 192
LD + +++ LQN++E L ++
Sbjct: 123 LDFAVQHIKGLQNEVEKLHKEM 144
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 106 RKRKRNNERVVE---KPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
RKRK E VE + +KR +A H L+ER RR+KINE ++ LQ+L+P C
Sbjct: 249 RKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCT 308
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSMKL 192
KT + MLD +I YV+SLQ+QI+ +++
Sbjct: 309 KT-DRSSMLDDVIEYVKSLQSQIQGKHLRI 337
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR + + H+L+ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 187 FLSM 190
+SM
Sbjct: 174 MMSM 177
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
++++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K A M
Sbjct: 194 DKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADM 253
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQ Q++ L
Sbjct: 254 LDLAVQHIKGLQTQVQKL 271
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KRG+ + H+++ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 188 LS 189
+S
Sbjct: 380 MS 381
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KRG+ + H+++ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 188 LS 189
+S
Sbjct: 380 MS 381
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KRG+ + H+++ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 188 LS 189
+S
Sbjct: 384 MS 385
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ YV+ LQ Q
Sbjct: 196 TRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQ 254
Query: 185 IEFLS 189
I+ LS
Sbjct: 255 IKLLS 259
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR + + H+++ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 187 FLSM 190
+SM
Sbjct: 316 MMSM 319
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R KR +A + H+L+E+ RR KINE+++ LQ LVP KT A MLD I Y++ LQ Q+
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKT-DKASMLDDAIEYLKHLQLQV 103
Query: 186 EFLSMK 191
+ LSM+
Sbjct: 104 QMLSMR 109
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E K + KR +A + H+L+ER RR++INE+++ LQ+L+P K+ A MLD I
Sbjct: 243 AEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAI 301
Query: 176 NYVRSLQNQIEFLSMKLSAASMYY 199
+Y++SLQ Q++ +SM M +
Sbjct: 302 DYLKSLQLQVQMMSMGCGMVPMMF 325
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA G ATD SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 323
Query: 186 EFLS---MKLSAASMYYDFNSELD 206
+ LS + + A Y N LD
Sbjct: 324 KLLSSDDLWMYAPIAYNGINIGLD 347
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRG ATD S+ R RRE+INERL+ LQ LVP K + + ML+ I+YV+ LQ Q+
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQLQV 270
Query: 186 EFLS 189
LS
Sbjct: 271 NMLS 274
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 80
Query: 187 FLSMK 191
LSM+
Sbjct: 81 MLSMR 85
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+R ++ D H+ +ER RR++INE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQ 74
Query: 187 FLSM 190
L M
Sbjct: 75 MLVM 78
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y+
Sbjct: 34 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYL 92
Query: 179 RSLQNQIEFLSMK 191
+ LQ Q++ LSM+
Sbjct: 93 KQLQLQVQMLSMR 105
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KRG+ + H+++ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 188 LSMKLSAAS 196
+S AA+
Sbjct: 325 MSSMGPAAA 333
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRAKRG AT S+AER RR +I+E+LR LQ+LVP K A MLD+ + +++ LQ+Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 185 IEFL 188
++ L
Sbjct: 87 LQAL 90
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + HSL+E+ RR++IN+++R LQ+L+P C K +++ LD I+Y+++LQ Q++
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISI-LDEAIDYLKTLQLQVQ 437
Query: 187 FLSM 190
+SM
Sbjct: 438 VMSM 441
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 21/107 (19%)
Query: 104 SGRKRKRNNERVVEKPKEVIH--------------------VRAKRGQATDSHSLAERVR 143
SG ++ ++ V +PK V H VRA+RGQATD HS+AER+R
Sbjct: 94 SGSGKRFRDDVVDGRPKNVYHGQPMSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLR 153
Query: 144 REKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
RE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q++ LSM
Sbjct: 154 RERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 199
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD---T 207
+ L++LVPGC K G A++LD IIN+V+SLQ Q+E+LSM+L+A + DF LD T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG-LDNFLT 59
Query: 208 TET--MPGTNECDAQDMERMVREGYG 231
TE + G N + D+E++ G
Sbjct: 60 TECGRITGLNYKNGMDLEQVTWPDMG 85
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
++R ++H+L E+ RR KINERL+ LQ +VPGC K+ A LD I+Y++SLQ+Q++
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 230
Query: 187 FLS 189
+S
Sbjct: 231 AMS 233
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR + + H+L+ER RR++INE++R LQ+L+P C K + A ML+ I Y+++LQ Q++
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 187 FLSM 190
+SM
Sbjct: 269 MMSM 272
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P+ +R ++ + H+ +ER RR++INE+L+ LQ+L+P C KT ++ MLD I+Y+
Sbjct: 7 PRRSTPPTTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYL 65
Query: 179 RSLQNQIEFLSM 190
+SLQ Q++ L M
Sbjct: 66 KSLQLQLQMLVM 77
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RA++G A D S+A RVRRE+I+ERL+ LQ L+P K + M ML+ I+YV+ L+
Sbjct: 637 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLE 695
Query: 183 NQIEFL 188
QI+ L
Sbjct: 696 FQIKML 701
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
++P+ +KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I
Sbjct: 148 DRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIE 206
Query: 177 YVRSLQNQIEFLSMK 191
Y++ LQ Q++ LSM+
Sbjct: 207 YLKQLQLQVQMLSMR 221
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 185 IEFLSM 190
++ LSM
Sbjct: 189 VKVLSM 194
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 185 IEFLSM 190
++ LSM
Sbjct: 189 VKVLSM 194
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 137 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 195
Query: 185 IEFLSM 190
++ LSM
Sbjct: 196 VKVLSM 201
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R +A H+ +ER RR++INE+++ LQ LVP KT A MLD +I Y++ LQ Q++
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 315
Query: 187 FLSMK 191
F+S++
Sbjct: 316 FMSVR 320
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 196
Query: 185 IEFLSM 190
++ LSM
Sbjct: 197 VKILSM 202
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +AT+ H+L+ER RR++IN+++R LQDL+P K + A ML I+Y++SLQ Q++
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGEAIDYLKSLQLQVQ 429
Query: 187 FLSM 190
+SM
Sbjct: 430 MMSM 433
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+R ++ + H+ +ER RR+KINE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVS-MLDEAIDYLKSLQLQLQ 72
Query: 187 FLSM 190
L M
Sbjct: 73 MLVM 76
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +AT+ H+L+ER RR++IN+++R LQDL+P K + A ML I+Y++SLQ Q++
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGEAIDYLKSLQLQVQ 435
Query: 187 FLSM 190
+SM
Sbjct: 436 MMSM 439
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y+
Sbjct: 33 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYL 91
Query: 179 RSLQNQIEFLSMK 191
+ LQ Q++ LSM+
Sbjct: 92 KHLQLQVQMLSMR 104
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 115 VVEKPKEVIHVR--AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
++E P + R +KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD
Sbjct: 128 ILEAPAKPTTSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLD 186
Query: 173 VIINYVRSLQNQIEFLSMKLSAASMY 198
I Y++ LQ Q++ L+M+ + S+Y
Sbjct: 187 EAIEYLKQLQLQVQMLTMR-NGVSLY 211
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 127 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 185
Query: 185 IEFLSM 190
++ LSM
Sbjct: 186 VKVLSM 191
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y+
Sbjct: 33 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYL 91
Query: 179 RSLQNQIEFLSMK 191
+ LQ Q++ LSM+
Sbjct: 92 KHLQLQVQMLSMR 104
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RA++G A D S+A RVRRE+I+ERL+ LQ L+P K + M ML+ I YV+ L+
Sbjct: 752 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLE 810
Query: 183 NQIEFL 188
QI+ L
Sbjct: 811 LQIKML 816
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+L+ER RR++INE+++ LQ+L+P C KT A MLD I Y++SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 368
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR + + H+L+ER RR++INE++R LQ+L+P C K + + ML+ I Y+++LQ Q++
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLEEAIEYLKTLQLQVQ 376
Query: 187 FLSM 190
+SM
Sbjct: 377 MMSM 380
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+ER+R LQ+L P K A LD+ I ++ LQ Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 185 IEFLS 189
++ L+
Sbjct: 396 VKSLA 400
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+E+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQM 160
Query: 188 LSMK 191
LSM+
Sbjct: 161 LSMR 164
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 119 PKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYV 178
P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y+
Sbjct: 35 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYL 93
Query: 179 RSLQNQIEFLSMK 191
+ LQ Q++ LSM+
Sbjct: 94 KHLQLQVQMLSMR 106
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A M+D I++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT-DRAAMIDEIVDYVKFLRLQ 208
Query: 185 IEFLSM-KLSAASMYYDFNSELDTTETM 211
++ LSM +L A +E+ + ++
Sbjct: 209 VKVLSMSRLGGAGAVAPLVTEMPLSSSI 236
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E ++ P++ + RAKRG AT S+AER RR +I+ +L+ LQ+LVP K A M
Sbjct: 217 ENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADM 276
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQ+Q+E L
Sbjct: 277 LDLAVEHIKGLQHQVESL 294
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 18/144 (12%)
Query: 64 SNGKKAAAHTVESFMNLSPTPASGSGLLSVNNKGTGMQGLSGRKRKRN------------ 111
++ +K A+H + PT S SG + + + + ++G KRK +
Sbjct: 513 ASSEKGASHCTQHLDIQEPTITSSSGRYATSAEPP-KEPVTGTKRKSSEREEPECQSEDM 571
Query: 112 -NERVVEKPKEVIHVR---AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM 167
+E V K K R KR +A + H+ +ER RR++INE++R LQ+L+P KT
Sbjct: 572 EDESVDTKQKPATTGRVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DK 630
Query: 168 AVMLDVIINYVRSLQNQIEFLSMK 191
A MLD I Y++ LQ Q++ +S++
Sbjct: 631 ASMLDEAIEYLKMLQLQLQMMSIR 654
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RA++G A D S+A RVRRE+I+ERL+ LQ L+P K + M ML+ I+YV+ L+
Sbjct: 820 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLE 878
Query: 183 NQIEFL 188
QI+ L
Sbjct: 879 FQIKML 884
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 154 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 212
Query: 185 IEFLSM 190
++ LSM
Sbjct: 213 VKVLSM 218
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 187 FLSMK 191
LSM+
Sbjct: 229 MLSMR 233
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 187 FLSMK 191
LSM+
Sbjct: 229 MLSMR 233
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 181 KRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQM 239
Query: 188 LSMK 191
LSMK
Sbjct: 240 LSMK 243
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + HSL+E+ RR++IN+++R LQ+L+P C K +++ LD I+Y+++LQ Q++
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISI-LDEAIDYLKTLQLQVQ 68
Query: 187 FLSM 190
+SM
Sbjct: 69 VMSM 72
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E ++ P++ + RAKRG AT S+AER RR +I+ +L+ LQ+LVP K A M
Sbjct: 219 ENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADM 278
Query: 171 LDVIINYVRSLQNQIE 186
LD+ + +++ LQ+Q+E
Sbjct: 279 LDLAVEHIKGLQHQVE 294
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
G ATD S+ R RREKINERL+ LQ+LVP K + + MLD I+YV+ LQNQ+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELL 58
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA RG AT+ SL R RRE+INERLR LQ+LVP K + ++ ML+ YV+ LQ Q
Sbjct: 194 ARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQ 252
Query: 185 IEFLS 189
I+ LS
Sbjct: 253 IKLLS 257
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
E ++ P++ + RAKRG AT S+AER RR +I+ +L+ LQ+LVP K A M
Sbjct: 217 ENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADM 276
Query: 171 LDVIINYVRSLQNQIE 186
LD+ + +++ LQ+Q+E
Sbjct: 277 LDLAVEHIKGLQHQVE 292
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 28 HHQQPQLCMSFADNNIQSEALVVPSIGLIADFSHDTSNGKKAAAHTVESFMNLSPTPASG 87
H QQP+ ++F ++ V ++GL A +S T+ S M SP P
Sbjct: 339 HQQQPEKALAFQESFGGYNVEVASTVGLTATYSDSL---------TIPSLMQPSPQPF-- 387
Query: 88 SGLLSVNNKGTG----MQGLSGRKRK--RNNERVVEKPKEVIHVRAKRGQ---ATDSHSL 138
L S N G + + + R+ + V +E+ R KR + D S+
Sbjct: 388 --LRSSGNCGAASPVDLDEFASMRAILFRHASQPVPSLEEIASSRPKRRNVRISKDPQSV 445
Query: 139 AERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
A R RRE+I++R+R LQ LVPG K M A MLD I+YV+ L+ Q++ L
Sbjct: 446 AARHRRERISDRIRVLQRLVPGGTK-MDTASMLDEAIHYVKFLKLQLQTL 494
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+ ++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K + M
Sbjct: 269 DNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDM 328
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQ+Q++ L
Sbjct: 329 LDLAVQHIKGLQHQLQNL 346
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+ ++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K + M
Sbjct: 269 DNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDM 328
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQ+Q++ L
Sbjct: 329 LDLAVQHIKGLQHQLQNL 346
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 112 VDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 171
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 172 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+ +ER RR++INE+++ LQ+LVP C K+ A +LD I Y++SLQ Q++
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKS-DKASILDEAIEYLKSLQLQVQI 198
Query: 188 LSMKLSAASMYY 199
+ M A M +
Sbjct: 199 MWMTTGMAPMMF 210
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 112 VDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 171
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 172 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A M+D I++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 197
Query: 185 IEFLSM-KLSAASMYYDFNSELDTTETM 211
++ LSM +L A +E+ + ++
Sbjct: 198 VKVLSMSRLGGAGAVAPLVTEMPLSSSV 225
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 187 FLSMK 191
LSM+
Sbjct: 158 MLSMR 162
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 187 FLSMK 191
LSM+
Sbjct: 158 MLSMR 162
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 112 VDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 171
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 172 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 112 VDNRCSSMKPVFHGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 171
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 172 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RAKRG AT S+AER RR +I+ +L+ LQ+LVP K A MLD+ + +++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 185 IE 186
+E
Sbjct: 293 VE 294
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RAKRG ATD S+ R RREKINERL+ LQ LVP + + + ML+ I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNG-EQVDIVTMLEEAIHFVKFLEFQL 529
Query: 186 EFL 188
E L
Sbjct: 530 ELL 532
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A M+D I++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 185 IEFLSM-KLSAASMYYDFNSELDTTETM 211
++ LSM +L A +E+ + ++
Sbjct: 203 VKVLSMSRLGGAGAVAPLVTEMPLSSSV 230
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A H+L+ER RR++INE+++ LQ+L+P C K A MLD I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKA-DKASMLDEAIEYLKSLQLQLQ 305
Query: 187 FLSM 190
+ M
Sbjct: 306 VVWM 309
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 112 VDNRCSSMKPVYHGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 171
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 172 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 113 ERVVEKPKEVI--HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVM 170
+ ++ P++ + +RAKRG AT S+AER RR +I+ +L+ LQDLVP K + M
Sbjct: 264 DNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDM 323
Query: 171 LDVIINYVRSLQNQIEFL 188
LD+ + +++ LQ+Q++ L
Sbjct: 324 LDLAVQHIKGLQHQLQNL 341
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
VRA+RGQATD HS+AER+RRE+I ER+R LQ+LVP KT A M+D I++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 206
Query: 185 IEFLSM-KLSAASMYYDFNSEL 205
++ LSM +L A +E+
Sbjct: 207 VKVLSMSRLGGAGAVAPLVTEM 228
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD---T 207
+ L++LVPGC K G A++LD IIN+V+SLQ Q+E+LSM+L+A + DF LD T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG-LDSFLT 59
Query: 208 TET--MPGTNECDAQDMERMVREGYG 231
TE + G N + D+E++ G
Sbjct: 60 TECGRIAGFNCKNGIDLEQVTWPEMG 85
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 6/80 (7%)
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFNSELD---T 207
+ L++LVPGC K G A++LD IIN+V+SLQ Q+E+LSM+L+A + DF LD T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG-LDSFLT 59
Query: 208 TET--MPGTNECDAQDMERM 225
TE + G N + D+E++
Sbjct: 60 TECGRIAGFNCKNGIDLEQV 79
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AER RR +I+ +L+ LQDLVP K + MLD+ + +++ LQ+Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 185 IEFL 188
++ L
Sbjct: 334 LQNL 337
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA++G A D S+A R RRE+I++RL+ LQ+LVP K + + ML+ INYV+ LQ Q+
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 186 EFLS 189
+ L+
Sbjct: 418 KVLT 421
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RR KINERL+ LQ LVPGC K+ A LD I+Y++SLQ+Q++ +S+ L++ ++Y
Sbjct: 225 RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPVVQ 283
Query: 203 SE---LDTTETMP 212
+ L T MP
Sbjct: 284 PQGMPLGTPVAMP 296
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
N G MQ L K++ NN KPK G A D S+A + RRE+I+ERL+ L
Sbjct: 210 NMGESMQAL---KKQCNNATKKPKPKSAA------GPAKDLQSIAAKNRRERISERLKVL 260
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
QDLVP K + + ML+ I+YV+ LQ Q++ L+
Sbjct: 261 QDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 294
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT 164
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K
Sbjct: 241 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 193
Query: 187 FLSMK 191
LSM+
Sbjct: 194 MLSMR 198
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RA++G A D S+A RVRRE+I+ERL+ LQ L+P K + M ML+ I YV+ L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLE 104
Query: 183 NQIEFL 188
QI+ L
Sbjct: 105 LQIKML 110
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 95 NKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCL 154
N G MQ L K++R++ KPK G A D S+A + RRE+I+ERL+ L
Sbjct: 207 NMGESMQAL---KKQRDSATKKPKPKSA-------GPAKDPQSIAAKNRRERISERLKML 256
Query: 155 QDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
QDLVP K + + ML+ I+YV+ LQ Q++ L+
Sbjct: 257 QDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 290
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
++R ++H+L E+ RR KINER + LQ +VPGC K+ A LD I+Y++SLQ+Q++
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 233
Query: 187 FLS 189
+S
Sbjct: 234 AMS 236
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
VRA+RGQATD HS+AER+RREKI ER++ LQ+LVP K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AER RR +I+ +L+ LQDLVP K + MLD+ + +++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 185 IEFLSMKL 192
++ L L
Sbjct: 325 VQKLHEDL 332
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+A R AT+S SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 268
Query: 185 IEFLS---MKLSAASMYYDFNSELD 206
I+ LS M + A Y N +D
Sbjct: 269 IKLLSSDEMWMYAPIAYNGMNIGID 293
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V EKP + + + H+L+ER RR+KINE++R L++L+P C K M A MLD
Sbjct: 192 VKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDA 250
Query: 175 INYVRSLQNQIEFLSM 190
I+Y+++L+ Q++ +SM
Sbjct: 251 IDYLKTLKLQLQIMSM 266
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 335
Query: 185 IEFLS 189
++ +S
Sbjct: 336 VQMMS 340
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y++ LQ Q++
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 160
Query: 187 FLSMK 191
LSM+
Sbjct: 161 MLSMR 165
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 93 VNNKGTGMQGL-SGRKRKRNNERVVEKPKEV-IHVRAKRGQATDSHSLAERVRREKINER 150
V+N+ + M+ + G+ ++ +P + VRA+RGQATD HS+AER+RRE+I ER
Sbjct: 49 VDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAER 108
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ+LVP KT A M+D I++YV+ L+ Q++ LSM
Sbjct: 109 IRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 147
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
H+L+ER RR+KINE++R L++L+P C K M A MLD I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
V EKPK R +TD ++A R RRE+INE++R LQ LVPG K M A MLD
Sbjct: 328 EVAEKPK-----RKNVKISTDPQTVAARHRRERINEKIRVLQKLVPGGSK-MDTASMLDE 381
Query: 174 IINYVRSLQNQIEFL--------SMKLSAASMYYDFN 202
NY++ L++Q++ L +M S+ + FN
Sbjct: 382 AANYLKFLRSQVKALESLGNKVDAMNCPPTSIAFSFN 418
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
KRG+A + H+L+ER RR++INE++R LQ+L+P C K + A MLD I Y+++LQ Q++
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 58
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
RA +G ATD SL R RREKINERL+ LQ+LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 225
Query: 185 IE 186
I+
Sbjct: 226 IK 227
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R KR + + H+L+E+ RREKIN+++R L+DL+P C K + A MLD I+Y+++L+ Q+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNK-VDKASMLDDAIDYLKTLKLQL 389
Query: 186 E 186
+
Sbjct: 390 Q 390
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 109 KRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
K ++ +V E RA RG ATD SL R RRE+INERL+ LQ +VP K + ++
Sbjct: 254 KDSDSKVSEVLSSSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDIS 312
Query: 169 VMLDVIINYVRSLQNQIE 186
ML+ ++YV+ LQ QI+
Sbjct: 313 TMLEEAVHYVKFLQLQIK 330
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RAKRG AT S+AERVRR +I+E+++ L+ L P K A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 185 IEFLS 189
++ L+
Sbjct: 227 VKTLT 231
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 124 HVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQN 183
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K + MLD + Y++ LQ
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 184 QI 185
Q+
Sbjct: 84 QV 85
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 187 FLS 189
LS
Sbjct: 75 VLS 77
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+++E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 212
Query: 187 FLSMK 191
LSM+
Sbjct: 213 MLSMR 217
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA A D SL R RRE+INERLR LQ+LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 265 RATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 323
Query: 186 EFLS---MKLSAASMYYDFNSELD 206
+ LS + + A +Y N LD
Sbjct: 324 KLLSSEDLWMYAPIVYNGINIGLD 347
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 187 FLS 189
LS
Sbjct: 75 VLS 77
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR KINE+L+ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 145
Query: 187 FLSMK 191
L ++
Sbjct: 146 MLMVR 150
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R +R + H+L+E+ RREKIN+++R L++L+P C K + A MLD I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNK-VDKASMLDDAIDYLKTLKLQL 379
Query: 186 EFLS--------MKLSAASMYYDFNSEL 205
+ +S M L AA+ + N +L
Sbjct: 380 QIMSMGNGLWPLMMLPAATTAHHMNPQL 407
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM------AVMLDVIINYV 178
+RAKRG AT S+AERVRR +I+ER+R LQ+LVP K++ + + MLD + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 179 RSLQNQIEFL 188
+ LQ Q++ L
Sbjct: 476 KFLQKQVDDL 485
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 185 IEFLS 189
+ +S
Sbjct: 266 VSMMS 270
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 185 IEFLS 189
+ +S
Sbjct: 266 VSMMS 270
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
R KR +A + H+L+ER RR++INE++R LQ+L+P KT A MLD I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQ 69
Query: 185 IEFLSMKLSAASMYY 199
++ ++L +S +
Sbjct: 70 LQVPKIELLHSSHTF 84
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
G ATD S+ R RREKINERL+ LQ+LVP K + + MLD I+YV+ LQ Q+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELL 58
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS--- 189
TD SL R RREKINERL+ LQ+LVP K + ++ ML+ ++Y++ +Q QI+ LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTK-VDISTMLEEAVHYIKFMQLQIKLLSSDD 312
Query: 190 MKLSAASMYYDFNSELDTTETMP 212
M + A Y FN LD P
Sbjct: 313 MWMFAPIAYNGFNVGLDLKIAPP 335
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + H+++E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 187 FLSMK 191
LSM+
Sbjct: 251 MLSMR 255
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INER++ LQ+L+P KT A MLD I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 187 FL 188
+
Sbjct: 63 VV 64
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 117 EKPKEVIHVR-------AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
E+P++V+ + KR + H+L ER RR+KIN+R+R L++L+P C KT A
Sbjct: 730 EEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKT-DKAS 788
Query: 170 MLDVIINYVRSLQNQIE 186
MLD I Y+++L+ QI+
Sbjct: 789 MLDDAIEYLKTLKLQIQ 805
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 117 EKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
E+P R KR +A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I
Sbjct: 18 EQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIE 76
Query: 177 YVRSLQNQIEFL 188
Y++ LQ Q++ +
Sbjct: 77 YLKQLQLQVQMI 88
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAK+G A D S+A R RRE+I++RL+ LQ+L+P K + + ML+ INYV+ LQ
Sbjct: 406 LKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQ 464
Query: 183 NQIEFL 188
Q++ L
Sbjct: 465 LQVKVL 470
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 322
Query: 185 IEFLSMKLSAASM 197
++ ++ +++ +SM
Sbjct: 323 VQMMN-RINMSSM 334
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
A +H+L E+ RR KI ER R LQ LVPGC A LD I Y++SLQ+Q+E S
Sbjct: 195 HAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEATSA 254
Query: 191 KLSAAS 196
S A+
Sbjct: 255 VGSPAA 260
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 267
Query: 185 IEFLS 189
+ +S
Sbjct: 268 VSMMS 272
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ RAK+G A D S+A R RRE+I++RL+ LQ+L+P K + + ML+ INYV+ LQ
Sbjct: 406 LKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQ 464
Query: 183 NQIEFL 188
Q++ L
Sbjct: 465 LQVKVL 470
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+A RG A+D SL R RRE+IN+RL+ LQ LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 132 AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQ 190
Query: 185 IEFLS 189
I+ LS
Sbjct: 191 IKLLS 195
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+K+ ++T+ H+L+ER RR++INER+R LQ+L+P C K A MLD I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 187 FLSM 190
+SM
Sbjct: 484 IMSM 487
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ + P+ S+A R+RRE+I+E++R LQ LVPG K M
Sbjct: 106 RKPKRRNVRISDDPQ----------------SIAARLRRERISEKIRILQRLVPGGTK-M 148
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I YV+ L+ QI L
Sbjct: 149 DTASMLDEAIRYVKFLKRQIRLL 171
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA++G A D S+A R RRE+I++RL+ LQ+LVP K + + ML+ INYV+ LQ Q+
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 186 E 186
+
Sbjct: 418 K 418
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
A +H+L E+ RR KI ER R LQ LVPGC A LD I Y++SLQ+Q+E S
Sbjct: 82 HAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEATSA 141
Query: 191 KLSAAS 196
S A+
Sbjct: 142 VGSPAA 147
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + H+++E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 187 FLSMK 191
LSM+
Sbjct: 251 MLSMR 255
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKKLQLQVQ 210
Query: 187 FLSMK--LSAASMYY 199
LS + + +SM +
Sbjct: 211 MLSARSGIDISSMRW 225
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR ++ + H+++E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 187 FLSMK 191
LSM+
Sbjct: 251 MLSMR 255
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 116 VEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVII 175
E K + KR +A + H+L+ER RR++INE+++ LQ+L+P K+ A MLD I
Sbjct: 243 AEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAI 301
Query: 176 NYVRSLQNQIEFLSM 190
+Y++SLQ Q++ + +
Sbjct: 302 DYLKSLQLQVQRVQL 316
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
H+ +ER RR++INE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQMLVM 71
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 215
Query: 187 FLSMK 191
LS++
Sbjct: 216 MLSLR 220
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+ER RR++INER++ LQ+L+P KT A MLD I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 187 FL 188
+
Sbjct: 63 VV 64
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
H+ +ER RR++INE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQIQLQMLVM 75
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
A + H+L+E+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 112 NERVVEKPKEVIHVRA---KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMA 168
+E V K K + R KR +A + H+ +ER RR++INE++R LQ+L+P KT A
Sbjct: 712 DESVDTKHKPITTGRGSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKA 770
Query: 169 VMLDVIINYVRSLQNQIEFLSMK 191
MLD I+Y++ LQ Q++ +S++
Sbjct: 771 SMLDEAIDYLKILQLQLQMMSIR 793
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK--LS 193
H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ LS++ LS
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLRNGLS 174
Query: 194 AASMYY 199
MY+
Sbjct: 175 LHPMYF 180
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 120 KEVIHVRAKRGQ---ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIIN 176
+E++ +R KR + D S+A R RRE+I++R+R LQ VPG K M A MLD I+
Sbjct: 374 EEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTK-MDTASMLDEAIH 432
Query: 177 YVRSLQNQIEFL 188
YV+ LQ Q++ L
Sbjct: 433 YVKFLQQQLQTL 444
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 185 IE 186
++
Sbjct: 346 VQ 347
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP KT A MLD +I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 185 IE 186
++
Sbjct: 346 VQ 347
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
S RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K
Sbjct: 113 SVRKPKRRNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK 156
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFL 188
M A MLD I YV+ L+ QI FL
Sbjct: 157 -MDTASMLDEAIRYVKFLKRQIRFL 180
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGM-------AVMLDVIINYVRS 180
KR +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I Y+++
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 181 LQNQIEFLSM 190
LQ Q++ +
Sbjct: 115 LQLQVQIFVL 124
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
K+ + HSL+ER RR+KIN+++R LQ L+P K + A MLD I Y+++LQ Q++
Sbjct: 377 KKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDK-VDKASMLDKAIEYLKTLQLQLQM 435
Query: 188 LSMK 191
+SM+
Sbjct: 436 MSMR 439
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
A+R ++H+L E+ RR KI+++L+ L+ LVPGC A +LD I +++SLQ QI+
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 187 FLSMKLS 193
+S
Sbjct: 79 VQPKAIS 85
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ R+++G A D S+A R RRE+I++RL+ LQDLVP K + + ML+ INYV+ +Q
Sbjct: 231 LKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQ 289
Query: 183 NQIE 186
Q++
Sbjct: 290 LQLQ 293
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+ +ER RR++INE++R LQ L+P KT A ML+ I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 187 FLSM 190
+ M
Sbjct: 415 VMWM 418
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 24/88 (27%)
Query: 132 ATDSHSLAERV----------------------RREKINERLRCLQDLVPGCYKTMGMAV 169
ATD HS+AERV RRE+I ER++ LQ+LVP KT A
Sbjct: 219 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKAS 277
Query: 170 MLDVIINYVRSLQNQIEFLSM-KLSAAS 196
MLD II+YV+ LQ Q++ LSM +L AS
Sbjct: 278 MLDEIIDYVKFLQLQVKVLSMSRLGGAS 305
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 24/88 (27%)
Query: 132 ATDSHSLAERV----------------------RREKINERLRCLQDLVPGCYKTMGMAV 169
ATD HS+AERV RRE+I ER++ LQ+LVP KT A
Sbjct: 218 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKAS 276
Query: 170 MLDVIINYVRSLQNQIEFLSM-KLSAAS 196
MLD II+YV+ LQ Q++ LSM +L AS
Sbjct: 277 MLDEIIDYVKFLQLQVKVLSMSRLGGAS 304
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 111 NNERVVEKPKEVIHVRAKRGQA-TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAV 169
++ ++ EK K R KR ++HSL E+ RR KI E+L+ LQ LVPGC A
Sbjct: 141 SDHKLQEKRKTSSTGRGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQAS 200
Query: 170 MLDVIINYVRSLQNQI 185
LD I Y++SLQ I
Sbjct: 201 TLDQTIRYIKSLQQHI 216
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K M
Sbjct: 122 RKPKRKNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK-M 164
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I+YV+ L+ QI L
Sbjct: 165 DTASMLDEAIHYVKFLKRQIRLL 187
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 123 IHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
+ R+++G A D S+A R RRE+I++RL+ LQDLVP K + + ML+ INYV+ +Q
Sbjct: 231 LKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQ 289
Query: 183 NQIE 186
Q++
Sbjct: 290 LQLQ 293
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 113 ERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLD 172
E V EKPK R ++D ++A R RRE+I++R+R LQ +VPG K M A MLD
Sbjct: 378 EEVAEKPK-----RKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGSK-MDTASMLD 431
Query: 173 VIINYVRSLQNQI---EFLSMKLSAASMY 198
NY++ L++Q+ E L K+S A Y
Sbjct: 432 EAANYLKFLRSQVKALESLGNKVSTAMDY 460
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A H+ +ER RR++IN++++ LQ LVP KT A MLD +I Y++ LQ Q++
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 278
Query: 188 LSMK 191
+S++
Sbjct: 279 MSVR 282
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A H+ +ER RR++IN++++ LQ LVP KT A MLD +I Y++ LQ Q++
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 240
Query: 188 LSMK 191
+S++
Sbjct: 241 MSVR 244
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+A +G ATD SL R RRE+I++RLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 298
Query: 185 IEFLS 189
+ LS
Sbjct: 299 NKLLS 303
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+VEKPK R +TD ++A R RRE+I+E++R LQ LVPG K M A MLD
Sbjct: 266 IVEKPK-----RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEA 319
Query: 175 INYVRSLQNQIEFL 188
NY++ L+ Q++ L
Sbjct: 320 ANYLKFLRAQVKAL 333
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 24/88 (27%)
Query: 132 ATDSHSLAERV----------------------RREKINERLRCLQDLVPGCYKTMGMAV 169
ATD HS+AERV RRE+I ER++ LQ+LVP KT A
Sbjct: 219 ATDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKAS 277
Query: 170 MLDVIINYVRSLQNQIEFLSM-KLSAAS 196
MLD II+YV+ LQ Q++ LSM +L AS
Sbjct: 278 MLDEIIDYVKFLQLQVKVLSMSRLGGAS 305
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
V KR +A H+ +ER RR+KIN+R++ LQ LVP K+ A MLD +I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKS-DKASMLDEVIEYLKQLQAQ 322
Query: 185 IEFLSMKLSAASM 197
++ ++ +++ +SM
Sbjct: 323 LQMIN-RINMSSM 334
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ E P+ S+A R RRE+I+E++R LQ LVPG K M
Sbjct: 111 RKPKRRNVRISEDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK-M 153
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I YV+ L+ QI+ L
Sbjct: 154 DTASMLDEAIRYVKFLKRQIKLL 176
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 140 ERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R+RRE+I ER++ LQ+LVP KT A MLD II+YV+ LQ Q++ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+VEKPK R +TD ++A R RRE+I+E++R LQ LVPG K M A MLD
Sbjct: 264 IVEKPK-----RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEA 317
Query: 175 INYVRSLQNQIEFL 188
NY++ L+ Q++ L
Sbjct: 318 ANYLKFLRAQVKAL 331
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 104 SGRKRKRNNE--RVVEKPKEVIHVRAKRGQAT---DSHSLAERVRREKINERLRCLQDLV 158
+G KR + E + +KP + +AK T D SLA + RRE+I+ERL+ LQ+LV
Sbjct: 167 AGNKRSQTGESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELV 226
Query: 159 PGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
P K + + ML+ I+YV+ LQ Q++ L+
Sbjct: 227 PNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 256
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
RA R T+ S+ R RRE+INERL+ LQ+LVP K + ++ ML+ ++YV+ LQ QI
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 285
Query: 186 EFLS 189
LS
Sbjct: 286 RLLS 289
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
R+ R ATD SL + RRE+IN RLR LQ+LVP K + ++ ML+ + YV+ LQ Q
Sbjct: 204 TRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVRYVKFLQLQ 262
Query: 185 IEFLS 189
I+ LS
Sbjct: 263 IKLLS 267
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+VEKPK R +TD ++A R RRE+I+E++R LQ LVPG K M A MLD
Sbjct: 293 IVEKPK-----RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEA 346
Query: 175 INYVRSLQNQIEFL 188
NY++ L+ Q++ L
Sbjct: 347 ANYLKFLRAQVKAL 360
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ 182
VRAKRG AT S+AERVRR +I++R+R LQ+LVP K A MLD + R+++
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVGNSRNIK 249
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKT------MGMAVMLDVIINYVRS 180
+K+ ++T+ H+L+ER RR++INER+R LQ+L+P C K A MLD I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 181 LQNQIEFLSM 190
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K M
Sbjct: 126 RKPKRRNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK-M 168
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I YV+ L+ QI L
Sbjct: 169 DTASMLDEAIRYVKFLKRQIRLL 191
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
++R +A H+ +ER RR++IN++++ LQ LVP KT A MLD +I Y++ LQ Q++
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 301
Query: 187 FLSMK 191
+S++
Sbjct: 302 AMSVR 306
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
Query: 125 VRAKRGQATDSHSLAERV-------------RREKINERLRCLQDLVPGCYKTMGMAVML 171
RA RG ATD SL R+ RRE+INERLR LQ LVP K + ++ ML
Sbjct: 237 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTML 295
Query: 172 DVIINYVRSLQNQIEFLS 189
+ + YV+ LQ QI+ LS
Sbjct: 296 EEAVQYVKFLQLQIKLLS 313
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 128 KRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEF 187
+R +A + H+L+ER RR++INER++ LQ+L+P C KT A +LD I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 311
Query: 188 LSM--KLSAASMYY 199
+ M ++AA M +
Sbjct: 312 MWMGSGMAAAPMMF 325
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
++ +G A+D SL R RRE+IN+RL+ LQ LVP K + ++ ML+ ++YV+ LQ Q
Sbjct: 133 AKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQ 191
Query: 185 IEFLS 189
I+ LS
Sbjct: 192 IKLLS 196
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R+RRE+++ERLR LQ LVPG K M A MLD +Y++ L++Q+E L
Sbjct: 276 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 331
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R+RRE+++ERLR LQ LVPG K M A MLD +Y++ L++Q+E L
Sbjct: 232 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 287
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K M
Sbjct: 121 RKPKRRNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK-M 163
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I YV+ L+ QI L
Sbjct: 164 DTASMLDEAIRYVKFLKRQIRLL 186
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R RRE+I+ERLR LQ LVPG K M A MLD NY+R L++QI L
Sbjct: 383 SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAANYLRFLKSQIREL 438
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 129 RGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
R TD SL R RRE+INERL+ LQ+LVP K + ++ ML+ + YV+ LQ QI+ L
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLL 280
Query: 189 S---MKLSAASMYYDFNSELD 206
S M + A Y N +D
Sbjct: 281 SSDDMWMYAPIAYNGMNIGVD 301
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 126 RAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQI 185
R +RG ATD S+ R RREKI ERLR LQ L+P K + + MLD ++YV+ L+ Q+
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQV 506
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 103 LSGRKR--KRNNERVVEKPKEVIHVRAKRGQAT---DSHSLAERVRREKINERLRCLQDL 157
L+G KR +N + +KP + AK T D SLA + RRE+I+ERL+ LQ+L
Sbjct: 174 LAGNKRPFTGDNTHLSKKPSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQEL 233
Query: 158 VPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
VP K + + ML+ I YV+ LQ Q++ L+
Sbjct: 234 VPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K M
Sbjct: 134 RKPKRRNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK-M 176
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I YV+ L+ QI L
Sbjct: 177 DTASMLDEAIRYVKFLKRQIRLL 199
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R RRE+I+ERLR LQ LVPG K M A MLD NY+R L++QI L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAANYLRFLKSQIREL 426
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
+VEKPK R +TD ++A R RRE+I+E++R LQ LVPG K M A MLD
Sbjct: 264 IVEKPK-----RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEA 317
Query: 175 INYVRSLQNQIEFL 188
NY + L+ Q++ L
Sbjct: 318 ANYFKFLRAQVKAL 331
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS-- 189
ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ ++YV+ LQ QI+ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 190 -MKLSAASMYYDFNSELD 206
M + A Y N +D
Sbjct: 287 EMWMYAPIAYNGMNIGID 304
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R+RRE+++ERLR LQ LVPG K M A MLD +Y++ L++Q+E L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 357
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS-- 189
ATD SL R RRE+INERL+ LQ+LVP K + ++ ML+ ++YV+ LQ QI+ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 190 -MKLSAASMYYDFNSELD 206
M + A Y N +D
Sbjct: 287 EMWMYAPIAYNGMNIGID 304
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R+RRE+++ERLR LQ LVPG K M A MLD +Y++ L++Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 359
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+G + +R N R+ ++D ++A R RRE+I+ERLR LQ LVPG K
Sbjct: 355 AGERPRRRNVRI----------------SSDPQTVAARQRRERISERLRVLQKLVPGGAK 398
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFL 188
M A MLD NY+R L++QI L
Sbjct: 399 -MDTASMLDEAANYLRFLKSQIREL 422
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 17/88 (19%)
Query: 103 LSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCY 162
L G K KR N R+ P+ V A R RRE+I+ ++R LQ LVPG
Sbjct: 277 LGGSKPKRRNVRISSDPQTV----------------AARHRRERISTKIRILQRLVPGGT 320
Query: 163 KTMGMAVMLDVIINYVRSLQNQIEFLSM 190
K M A MLD I+YV+ L++Q++ + M
Sbjct: 321 K-MDTASMLDEAIHYVKYLKSQVQAMEM 347
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R RRE+I+ERLR LQ LVPG K M A MLD NY+R L++QI L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAANYLRFLKSQIREL 426
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
++R +A + H+ +ER RR++INE++R LQ L+P KT A ML+ I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 187 FLSM 190
+ M
Sbjct: 415 VMWM 418
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS--- 189
TD SL R RRE+INERL+ LQ+L+P K + ++ ML+ ++YV+ LQ QI+ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 190 MKLSAASMYYDFNSELDTTETMP 212
M + A Y N LD + P
Sbjct: 299 MWMFAPIAYNGVNVGLDLKISPP 321
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS--- 189
TD SL R RRE+INERL+ LQ+L+P K + ++ ML+ ++YV+ LQ QI+ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 190 MKLSAASMYYDFNSELDTTETMP 212
M + A Y N LD + P
Sbjct: 299 MWMFAPIAYNGVNVGLDLKISPP 321
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+ +ER RR++INE++R LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 77
Query: 187 FLSM 190
++
Sbjct: 78 VCAV 81
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 133 TDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS--- 189
TD SL R RRE+INERL+ LQ+L+P K + ++ ML+ ++YV+ LQ QI+ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 190 MKLSAASMYYDFNSELDTTETMP 212
M + A Y N LD + P
Sbjct: 299 MWMFAPIAYNGVNVGLDLKISPP 321
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 114 RVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDV 173
VVEK K R +TD ++A R RRE+I+E++R LQ LVPG K M A MLD
Sbjct: 326 EVVEKLK-----RKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSK-MDTASMLDE 379
Query: 174 IINYVRSLQNQIEFL--------SMKLSAASMYYDFN 202
NY++ L++Q++ L +M S+ + FN
Sbjct: 380 AANYLKFLRSQVKALESLGNKVDAMNCPPTSIAFSFN 416
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
+G + +R N R+ ++D ++A R RRE+I+ERLR LQ LVPG K
Sbjct: 309 AGERPRRRNVRI----------------SSDPQTVAARQRRERISERLRVLQKLVPGGAK 352
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFL 188
M A MLD +Y+R LQ+Q+ L
Sbjct: 353 -MDTASMLDEAASYLRFLQSQVREL 376
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 125 VRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQ 184
+RA+RG AT S+AERVRR KI+E ++ L DLVP K A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 185 IEFLSMKL 192
IE + +L
Sbjct: 617 IEQMKEEL 624
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
EKP+ +VR ++D ++A R+RRE+++ERLR LQ LVPG K M A MLD
Sbjct: 281 AAEKPRRK-NVRI----SSDPQTVAARLRRERVSERLRVLQKLVPGGSK-MDTASMLDEA 334
Query: 175 INYVRSLQNQIEFL 188
+Y++ L++Q++ L
Sbjct: 335 ASYLKFLKSQVQAL 348
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R RRE+I+ERLR LQ LVPG K M A MLD NY+R L++Q+ L
Sbjct: 354 SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAANYLRFLKSQVREL 409
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+R +A + H+L+ER RR++INER++ LQ+L+P C KT A +LD I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 308
Query: 187 FLSM 190
+ M
Sbjct: 309 VMWM 312
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 143 RREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSAASMYYDFN 202
RRE+INERLR LQ LVP K + ++ ML+ + YV+ LQ QI+ LSM + A Y N
Sbjct: 87 RRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSMWMYAPIAYNGMN 145
Query: 203 SELDTTETMP 212
LD + + P
Sbjct: 146 IGLDLSFSSP 155
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y++ LQ Q++ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 191 K 191
+
Sbjct: 256 R 256
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
+ D S+A R RRE+I+ER+R LQ LVPG K M A MLD I+YV+ L+ Q++ L
Sbjct: 164 SKDPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 219
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 103 LSGRKRKRN--NERVVEKPKEVIHVRAKRGQAT---DSHSLAERVRREKINERLRCLQDL 157
L+G KR N ++ +KP + + K T D SLA + RRE+I+ERL+ LQ+L
Sbjct: 106 LAGNKRPFTGENTQLSKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQEL 165
Query: 158 VPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
VP K + + ML+ I YV+ LQ Q++ L+
Sbjct: 166 VPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 196
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 104 SGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYK 163
S RK KR N R+ + P+ S+A R RRE+I+E++R LQ LVPG K
Sbjct: 104 SVRKPKRRNVRISDDPQ----------------SVAARHRRERISEKIRILQRLVPGGTK 147
Query: 164 TMGMAVMLDVIINYVRSLQNQIEFL 188
M A MLD I YV+ L+ QI L
Sbjct: 148 -MDTASMLDEAILYVKFLKRQIRLL 171
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y++ LQ Q++ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 191 K 191
+
Sbjct: 235 R 235
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
+ D S+A R RRE+I+E++R LQ +VPG K M A MLD I+YV+ L+ Q++ L +
Sbjct: 178 SKDPQSIAARHRRERISEKIRILQRMVPGGTK-MDTASMLDEAIHYVKFLKTQLKSLQER 236
Query: 192 LSAA 195
S A
Sbjct: 237 ASGA 240
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 91 LSVNNKGTGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINER 150
++V T L G K KR N R+ P+ V A R RRE+I+ +
Sbjct: 266 MAVWRPITATDCLGGSKPKRRNVRISSDPQTV----------------AARHRRERISTK 309
Query: 151 LRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+R LQ LVPG K M A MLD I+YV+ L++Q++ + M
Sbjct: 310 IRILQRLVPGGTK-MDTASMLDEAIHYVKYLKSQVQAMEM 348
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+KR +A + H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKT-DKASMLDEAIEYLKLLQLQVQ 192
Query: 187 FLSMKL 192
LS++
Sbjct: 193 GLSVRF 198
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 101 QGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPG 160
Q +S K++ R K K V K D SLA + RRE+I+ERLR LQ+LVP
Sbjct: 178 QAMSPSKKQCGAGRKAGKAKSVPTTPTK-----DPQSLAAKNRRERISERLRILQELVPN 232
Query: 161 CYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
K + + ML+ I+YV+ LQ Q++ L+
Sbjct: 233 GTK-VDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 103 LSGRKR--KRNNERVVEKPKEVIHVRAKRGQAT---DSHSLAERVRREKINERLRCLQDL 157
L+G KR N ++ +KP + + K T D SLA + RRE+I+ERL+ LQ+L
Sbjct: 174 LAGNKRPFTGENTQLSKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQEL 233
Query: 158 VPGCYKTMGMAVMLDVIINYVRSLQNQIEFLS 189
VP K + + ML+ I YV+ LQ Q++ L+
Sbjct: 234 VPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
+R +A + H+L+ER RR++INER++ LQ+L+P C KT A +LD I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 314
Query: 187 FLSM 190
+ M
Sbjct: 315 VMWM 318
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 136 HSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMK 191
H+L+E+ RR +INE+++ LQ+L+P KT A MLD I Y++ LQ Q++ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 130 GQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
G ATD S+ R RREKINERL+ LQ LVP K + + MLD I+YV+ LQ Q+ L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 84 PASGSGLLSVNNKG---TGMQGLSGRKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAE 140
P+ GLLS + TG Q + + KRN R K I + H+L+E
Sbjct: 50 PSVSGGLLSPSGYAVADTGHQDKNAFENKRNGGRQRNSLKRNIDAQF--------HNLSE 101
Query: 141 RVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+ RR KINE+++ LQ L+P KT A MLD I Y++ LQ Q++ L++
Sbjct: 102 KRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|171687825|ref|XP_001908853.1| hypothetical protein [Podospora anserina S mat+]
gi|170943874|emb|CAP69526.1| unnamed protein product [Podospora anserina S mat+]
Length = 333
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 135 SHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSMKLSA 194
+HSL ER RR K+NE L+ L+P C M +L I YVR L++ + L + S
Sbjct: 164 AHSLIERRRRSKMNEEFAVLKSLIPACTGEMHKLAILQASIEYVRYLEDCVSQLKAQRSN 223
Query: 195 ASMYYDFNSELDTTETMPG 213
+ + N+ TT T+P
Sbjct: 224 TTSESEANAPTPTTNTLPS 242
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 131 QATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+A + H+L+E+ RR +INE+++ LQ L+P KT A MLD I Y++ LQ Q++ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 191 K 191
+
Sbjct: 256 R 256
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 132 ATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFL 188
++D ++A R+RRE+++ERLR LQ LVPG K M A MLD +Y++ L++Q++ L
Sbjct: 292 SSDPQTVAARLRRERVSERLRVLQKLVPGGSK-MDTASMLDEAASYLKFLKSQVQAL 347
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 127 AKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIE 186
AKR +A + H+ +ER RR++INE++R LQ+L+P KT A ML+ I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLEEAIEYLKMLQLQLQ 77
Query: 187 F 187
Sbjct: 78 V 78
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 135 SHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQNQIEFLSM 190
+H ++ + RR++INE+L+ LQ+L+P C KT ++ MLD I+Y++SLQ Q++ L M
Sbjct: 143 AHLVSRKRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQMLVM 197
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 115 VVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTMGMAVMLDVI 174
V EKPK R +TD ++A R RRE+I++R+R LQ +VPG K M A MLD
Sbjct: 193 VAEKPK-----RKNVRISTDPQTVAARQRRERISDRIRVLQGMVPGGSK-MDTASMLDEA 246
Query: 175 INYVRSLQNQIEFL 188
NY++ L++Q++ L
Sbjct: 247 ANYLKFLRSQVKAL 260
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K +R N R+ E P+ S+A R RRE+I+ER+R LQ LVPG K M
Sbjct: 150 KKPRRRNVRISEDPQ----------------SVAARHRRERISERVRVLQRLVPGGTK-M 192
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I Y++ L+ Q++ L
Sbjct: 193 DTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 106 RKRKRNNERVVEKPKEVIHVRAKRGQATDSHSLAERVRREKINERLRCLQDLVPGCYKTM 165
+K +R N R+ E P+ S+A R RRE+I+ER+R LQ LVPG K M
Sbjct: 149 KKPRRRNVRISEDPQ----------------SVAARHRRERISERVRVLQRLVPGGTK-M 191
Query: 166 GMAVMLDVIINYVRSLQNQIEFL 188
A MLD I Y++ L+ Q++ L
Sbjct: 192 DTASMLDEAIRYIKFLKRQVQEL 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,899,653,200
Number of Sequences: 23463169
Number of extensions: 157266719
Number of successful extensions: 373460
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 1605
Number of HSP's that attempted gapping in prelim test: 371090
Number of HSP's gapped (non-prelim): 3134
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)