BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042910
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRX9|BAH1_ARATH E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana GN=BAH1
PE=1 SV=1
Length = 335
Score = 302 bits (773), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/236 (65%), Positives = 177/236 (75%), Gaps = 12/236 (5%)
Query: 1 MKFCKKYQEYMQGQERK--LPGVGFKKLKKILKMCRKEFQSQKEINKGVVDTQTCPHQCP 58
MKFCKKY+EYMQGQ+ K LPGVGFKKLKKILK CR+ + I+ C +CP
Sbjct: 1 MKFCKKYEEYMQGQKEKKNLPGVGFKKLKKILKRCRRNHVPSR-ISFTDAINHNCSRECP 59
Query: 59 VCDGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHG-THGALIQEG 117
VCDGTFFP LL EM +VG FNE AQKLLELHLASGF+KCL W +G H LIQEG
Sbjct: 60 VCDGTFFPELLKEMEDVVGWFNEHAQKLLELHLASGFTKCLTWLRGNSRKKDHHGLIQEG 119
Query: 118 KDLVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHINL 177
KDLV YALINA+AIRKILKKYDK+H S+QGQAFK+Q Q M +EILQSPWLCELMAFHINL
Sbjct: 120 KDLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEILQSPWLCELMAFHINL 179
Query: 178 RDTK------VNTRKAP--AFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
+++K + + P A F+GC L F+D KP LSCEL DSVK+DIDLTCSICL
Sbjct: 180 KESKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVKVDIDLTCSICL 235
>sp|B8B5U8|BAHL2_ORYSI Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. indica GN=OsI_27296 PE=3 SV=1
Length = 321
Score = 300 bits (769), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/225 (67%), Positives = 183/225 (81%), Gaps = 4/225 (1%)
Query: 1 MKFCKKYQEYMQGQERKLPGVGFKKLKKILKMCRKEFQSQKEINKGVVDTQTCPHQCPVC 60
MKF KKY++YM+G + +LPGVG K+LKK+LK CR + QS + N G CP C VC
Sbjct: 1 MKFAKKYEKYMKGMDEELPGVGLKRLKKLLKKCRSDLQSHE--NDGS-SAGRCPGHCSVC 57
Query: 61 DGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHGTHGALIQEGKDL 120
DG+FFPSLLNEMSA+VGCFNE+A+KLLELHLASGF K +WF K H +HGALIQ+GKDL
Sbjct: 58 DGSFFPSLLNEMSAVVGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGKDL 117
Query: 121 VTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHINLRDT 180
VTYA+INA+A+RKILKKYDK+HYSKQGQ FK+QAQS+H+EILQSPWLCELMAF++NLR +
Sbjct: 118 VTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLRRS 177
Query: 181 KVNTRKAPAFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
K N A F C L F+DDKP++SC LFDS+++DI LTCSICL
Sbjct: 178 KKNN-GAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICL 221
>sp|Q7XI73|BAHL2_ORYSJ Probable E3 ubiquitin-protein ligase BAH1-like 2 OS=Oryza sativa
subsp. japonica GN=Os07g0673200 PE=2 SV=1
Length = 321
Score = 300 bits (767), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/225 (66%), Positives = 183/225 (81%), Gaps = 4/225 (1%)
Query: 1 MKFCKKYQEYMQGQERKLPGVGFKKLKKILKMCRKEFQSQKEINKGVVDTQTCPHQCPVC 60
MKF KKY++YM+G + +LPGVG K+LKK+LK CR + QS + N G CP C VC
Sbjct: 1 MKFAKKYEKYMKGMDEELPGVGLKRLKKLLKKCRSDLQSHE--NDGS-SAGRCPGHCSVC 57
Query: 61 DGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHGTHGALIQEGKDL 120
DG+FFPSLLNEMSA++GCFNE+A+KLLELHLASGF K +WF K H +HGALIQ+GKDL
Sbjct: 58 DGSFFPSLLNEMSAVIGCFNEKAKKLLELHLASGFKKYTMWFTSKGHKSHGALIQQGKDL 117
Query: 121 VTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHINLRDT 180
VTYA+INA+A+RKILKKYDK+HYSKQGQ FK+QAQS+H+EILQSPWLCELMAF++NLR +
Sbjct: 118 VTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHIEILQSPWLCELMAFYMNLRRS 177
Query: 181 KVNTRKAPAFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
K N A F C L F+DDKP++SC LFDS+++DI LTCSICL
Sbjct: 178 KKNN-GAMELFGDCSLVFDDDKPTISCNLFDSMRVDISLTCSICL 221
>sp|Q7XZZ3|BAHL1_ORYSJ Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. japonica GN=Os03g0650900 PE=2 SV=1
Length = 339
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 16/240 (6%)
Query: 1 MKFCKKYQEYMQGQERKL----PGVGFKKLKKILKMCR--KEFQ------SQKEINKGVV 48
MKF Y+EY++ Q+ K V +K+LKK+LK CR + Q Q+E N
Sbjct: 1 MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQEDCPNGDQQEGNNESP 60
Query: 49 DTQTCPHQCPVCDGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHG 108
D C + C +CD FF L E S I GCF+ R Q+LL LH+ SGF + + +
Sbjct: 61 DICKC-NSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNLHVPSGFLRYIWRVRQCFID 119
Query: 109 THGALIQEGKDLVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLC 168
++QEG+ L+ Y +NAIAIRKILKKYDK+H S G+ FKS+ Q+ H+E+LQSPWL
Sbjct: 120 DQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLI 179
Query: 169 ELMAFHINLRDTKVNTRKA---PAFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
EL AFH+N + ++ FF+ + +P ++ + +++K + LTC ICL
Sbjct: 180 ELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICL 239
>sp|A2XK56|BAHL1_ORYSI Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. indica GN=OsI_12825 PE=3 SV=1
Length = 339
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 16/240 (6%)
Query: 1 MKFCKKYQEYMQGQERKL----PGVGFKKLKKILKMCR--KEFQ------SQKEINKGVV 48
MKF Y+EY++ Q+ K V +K+LKK+LK CR + Q Q+E N
Sbjct: 1 MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQEDCPNGDQQEGNNESP 60
Query: 49 DTQTCPHQCPVCDGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHG 108
D C + C +CD FF L E S I GCF+ R Q+LL LH+ SGF + + +
Sbjct: 61 DICKC-NSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNLHVPSGFLRYIWRVRQCFID 119
Query: 109 THGALIQEGKDLVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLC 168
++QEG+ L+ Y +NAIAIRKILKKYDK+H S G+ FKS+ Q+ H+E+LQSPWL
Sbjct: 120 DQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIELLQSPWLI 179
Query: 169 ELMAFHINLRDTKVNTRKA---PAFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
EL AFH+N + ++ FF+ + +P ++ + +++K + LTC ICL
Sbjct: 180 ELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICL 239
>sp|Q8GW10|BAH1L_ARATH Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis
thaliana GN=RF178 PE=2 SV=1
Length = 335
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
Query: 57 CPVCDGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGFSKCLIWFKGKLHGTHGALIQE 116
CP CD FF L+ E + I G F R + LL LH+A+G + +I + AL+QE
Sbjct: 68 CPWCDQMFFEELMKEATDIAGFFRSRVRHLLHLHVATGMQRYMIRLRRCFTDEKQALVQE 127
Query: 117 GKDLVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHIN 176
G+ L+ Y +NAIAIRKILKKYDKVH S+ G+ FK + ++ +E+L SPWL EL AF++N
Sbjct: 128 GQILIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAERIELLHSPWLIELGAFYLN 187
Query: 177 LRDTKVNTRKAPAFFEGCYLKFNDDKPSLSCELFDSVKLDIDLTCSICL 225
V K C N+D+P L L +S++L+ DLTC+ICL
Sbjct: 188 SGLDNVGNFKNSFGRVACE-NLNEDQPVLKLMLPNSIELEYDLTCAICL 235
>sp|Q9SKC1|U74C1_ARATH UDP-glycosyltransferase 74C1 OS=Arabidopsis thaliana GN=UGT74C1
PE=2 SV=1
Length = 457
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 159 VEILQSPWLCELMAFHIN--LRDTKVNTRKAP--AFFEGCYLKFNDDKPSLSCE 208
V PWL L+ +HIN D V+ + P A F G L DD PS +CE
Sbjct: 128 VAYFTQPWLASLVYYHINEGTYDVPVDRHENPTLASFPGFPLLSQDDLPSFACE 181
>sp|Q5N623|GCH1_SYNP6 GTP cyclohydrolase 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=folE PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 21 VGFKKLKKILKMCRKEFQSQKEINK-------------GVVDTQTCPHQCPVCDGTFFPS 67
VG KL +I++M + Q Q+ + + GV H C V G P
Sbjct: 120 VGLSKLARIVEMYSRRLQVQERLTRQIAESVQEILDPQGVAVVMEATHMCMVMRGVQKPG 179
Query: 68 LLNEMSAIVGCFNE 81
SA+VG F E
Sbjct: 180 SWTVTSAMVGVFQE 193
>sp|Q54769|GCH1_SYNE7 GTP cyclohydrolase 1 OS=Synechococcus elongatus (strain PCC 7942)
GN=folE PE=3 SV=2
Length = 213
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 21 VGFKKLKKILKMCRKEFQSQKEINK-------------GVVDTQTCPHQCPVCDGTFFPS 67
VG KL +I++M + Q Q+ + + GV H C V G P
Sbjct: 120 VGLSKLARIVEMYSRRLQVQERLTRQIAESVQEILDPQGVAVVMEATHMCMVMRGVQKPG 179
Query: 68 LLNEMSAIVGCFNE 81
SA+VG F E
Sbjct: 180 SWTVTSAMVGVFQE 193
>sp|A2SIM2|SYC_METPP Cysteine--tRNA ligase OS=Methylibium petroleiphilum (strain PM1)
GN=cysS PE=3 SV=2
Length = 461
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 16/73 (21%)
Query: 80 NERAQKLLELHLASGFSKCLIWFKGKLHGTHGALIQEGKDLVTYALINAIAIRKILKKYD 139
NE AQ HL SG S +W H + + ++ +L N IR ILK+YD
Sbjct: 241 NEIAQSDGAFHLGSGHSFVNVWM-------HNGFLNVDNEKMSKSLGNFFTIRDILKRYD 293
Query: 140 ---------KVHY 143
+VHY
Sbjct: 294 GETIRFFMLRVHY 306
>sp|Q9SA02|FB26_ARATH F-box protein At1g31080 OS=Arabidopsis thaliana GN=At1g31080 PE=2
SV=1
Length = 355
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 54 PHQCPVC-DGTFFPSLLNEMSAIVGCFNERAQKLLELHLA----SGFSKCLIWFKGKLHG 108
P + P+C +G + + +++GCF+ R++K L+L+ +S+ LI +KGKL
Sbjct: 130 PREKPICINGVLYYISVGSYYSLIGCFDVRSEKFKFLYLSPDCFPNWSRKLINYKGKLGV 189
Query: 109 T 109
T
Sbjct: 190 T 190
>sp|Q6R8G6|PHO14_ARATH Phosphate transporter PHO1 homolog 4 OS=Arabidopsis thaliana
GN=PHO1-H4 PE=2 SV=1
Length = 745
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 115 QEGKDLVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFH 174
Q+ + L Y+ +NA A+ KI+KKYDK+ K A +++E++ +L H
Sbjct: 253 QKLRHLKNYSFLNASAVSKIMKKYDKIA--------KRNAAKLYMEMVDKSFLSSSEEVH 304
>sp|Q9T050|SPXM2_ARATH SPX domain-containing membrane protein At4g11810 OS=Arabidopsis
thaliana GN=At4g11810 PE=3 SV=1
Length = 707
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 77 GCFNERAQKLLELHLASGFSKCLIWFKGKLHGTHGALIQEGKDLVTYALINAIAIRKILK 136
G + R QKL E H L KL + A+ Q+ L+ + +NAI IRKILK
Sbjct: 71 GLLSSRLQKLREWHDTLQDEPDLSQI-AKLREAYRAVGQDLLKLLFFIDMNAIGIRKILK 129
Query: 137 KYDK-VHYSKQGQAFKSQAQ---SMHVEILQSPWLCELM-AFHINLRDTKVNTRKAPAFF 191
K+DK Y K++A S ++ + L ++ A NL + + N
Sbjct: 130 KFDKRFGYRFTNYYVKTRADHPYSQLQQVFRHVGLGAVVGAISRNLHELQNN-------- 181
Query: 192 EGCYLKFNDDKPSLSCE--LFDSVKLDID 218
EG YL D+P L + + DS+K +D
Sbjct: 182 EGSYLSIY-DQPVLPLQDPVVDSIKNAVD 209
>sp|B2J1L7|GCH1_NOSP7 GTP cyclohydrolase 1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=folE PE=3 SV=1
Length = 235
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 21 VGFKKLKKILKMCRKEFQSQKEINK-------------GVVDTQTCPHQCPVCDGTFFPS 67
VG KL +I++M + Q Q+ + + GV H C V G P
Sbjct: 143 VGLSKLARIVEMYSRRLQVQERLTRQIAEAIQTILEPRGVAVVMEASHMCMVMRGVQKPG 202
Query: 68 LLNEMSAIVGCFNE 81
SA+VG F E
Sbjct: 203 SWTVTSAMVGVFQE 216
>sp|Q651J5|PHO13_ORYSJ Phosphate transporter PHO1-3 OS=Oryza sativa subsp. japonica
GN=PHO1-3 PE=2 SV=1
Length = 828
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 11/61 (18%)
Query: 110 HGALIQEGKDL---VTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPW 166
GALI+ K L TY +N +A KILKK+DKV +AQS+++++++S +
Sbjct: 336 RGALIELYKGLGYLKTYRSLNMMAFVKILKKFDKVT--------AKEAQSIYLKVVESSY 387
Query: 167 L 167
Sbjct: 388 F 388
>sp|Q767I8|PCDA4_RAT Protocadherin alpha-4 OS=Rattus norvegicus GN=Pcdha4 PE=2 SV=1
Length = 947
Score = 32.0 bits (71), Expect = 3.8, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 120 LVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHINLRD 179
LV+Y+L+ ++L Y VH ++ G+ F Q H E+ EL+ F ++ RD
Sbjct: 489 LVSYSLVERRVGERLLSSYVSVH-AESGKVFALQPLD-HEEL-------ELLQFQVSARD 539
Query: 180 TKVNTRKAPAFFEGCYLKFNDDKPSL 205
V + + L ND+ P+L
Sbjct: 540 AGVPALGSNVTLQVFVLDENDNAPTL 565
>sp|Q6R8G3|PHO17_ARATH Phosphate transporter PHO1 homolog 7 OS=Arabidopsis thaliana
GN=PHO1-H7 PE=2 SV=1
Length = 750
Score = 32.0 bits (71), Expect = 3.9, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 118 KDLVTYALINAIAIRKILKKYDKV 141
+ L Y+ +N +AI KI+KKYDK+
Sbjct: 264 RHLKNYSFLNTLAISKIMKKYDKI 287
>sp|Q6R8G2|PHO18_ARATH Phosphate transporter PHO1 homolog 8 OS=Arabidopsis thaliana
GN=PHO1-H8 PE=2 SV=1
Length = 751
Score = 32.0 bits (71), Expect = 4.1, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 118 KDLVTYALINAIAIRKILKKYDKV 141
+ L Y+ +N +AI KI+KKYDK+
Sbjct: 265 RHLKNYSFLNTLAISKIMKKYDKI 288
>sp|O88689|PCDA4_MOUSE Protocadherin alpha-4 OS=Mus musculus GN=Pcdha4 PE=1 SV=1
Length = 947
Score = 31.6 bits (70), Expect = 4.6, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 120 LVTYALINAIAIRKILKKYDKVHYSKQGQAFKSQAQSMHVEILQSPWLCELMAFHINLRD 179
LV+Y+L+ ++L Y VH ++ G+ F Q H E+ EL+ F ++ RD
Sbjct: 489 LVSYSLVERRVGERLLSSYVSVH-AESGKVFALQPLD-HEEL-------ELLRFQVSARD 539
Query: 180 TKVNTRKAPAFFEGCYLKFNDDKPSL 205
V + + L ND+ P+L
Sbjct: 540 AGVPALGSNVTLQVFVLDENDNAPTL 565
>sp|Q6R8G7|PHO13_ARATH Phosphate transporter PHO1 homolog 3 OS=Arabidopsis thaliana
GN=PHO1;H3 PE=2 SV=2
Length = 813
Score = 31.6 bits (70), Expect = 5.4, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 115 QEGKDLVTYALINAIAIRKILKKYDKV 141
Q+ + L +Y+ +N +A KILKKYDK+
Sbjct: 322 QKLRLLKSYSFLNVLAFSKILKKYDKI 348
>sp|Q54MJ9|SPXS3_DICDI SPX and EXS domain-containing protein 3 OS=Dictyostelium discoideum
GN=xpr1 PE=3 SV=1
Length = 919
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 115 QEGKDLVTYALINAIAIRKILKKYDKV 141
+E + L Y +N IA RKI KKYDKV
Sbjct: 313 REIQALKEYTSLNMIAFRKIFKKYDKV 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,234,402
Number of Sequences: 539616
Number of extensions: 3281023
Number of successful extensions: 10844
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 10806
Number of HSP's gapped (non-prelim): 28
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)