BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042911
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +Y+P+P+WGNH +F AGL +++YRYYDP T L+F G
Sbjct: 116 LQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 164
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +Y+P+P+WGNH +F AGL +++YRYYDP T L+F G
Sbjct: 116 LQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 164
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
N+ + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 88 NNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 147
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 148 QGYRYYDPKTCGFDFSG 164
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
N+ + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 88 NNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 147
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 148 QGYRYYDPKTCGFDFSG 164
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 422 FRRARTISRT------IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
R+A ++R +++ PTW NH + GL V++YRY+D TRG++F G
Sbjct: 104 LRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG 158
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VFT AG ++SYRY+D RGL+ G
Sbjct: 133 VYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQG 172
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VFT AG ++SYRY+D RGL+ G
Sbjct: 133 VYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQG 172
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 122 VYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQG 161
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
pdb|2CST|B Chain B, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
Length = 411
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF AG +++YRY+D A RGL+ G
Sbjct: 132 VYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQG 171
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF AG +++YRY+D A RGL+ G
Sbjct: 132 VYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQG 171
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ PTW NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAHT--KAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ PTW NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
F R + I P+W NH +F +AG V +Y YYD T G+NF G
Sbjct: 136 FLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDG 184
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
F R + I P+W NH +F +AG V +Y YYD T G+NF G
Sbjct: 136 FLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDG 184
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T R +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAHT--KAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAHT--KAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVGADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAHT--KAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAHT--KAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH +F AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGSGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
IY P + NH +F AG+ + Y YYDPAT+GLN G
Sbjct: 134 IYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAG 172
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 67 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 116
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 117 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 169
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
+++ PTW NH +F AG V +Y +YD AT G+ F+
Sbjct: 124 VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN 161
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
+++ PTW NH +F AG V +Y +YD AT G+ F+
Sbjct: 124 VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN 161
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T R +++ P W H VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ +W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNASWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGL-SVKSYRYYDPATRGLNFHG 470
IY+ PTW NH V AG ++ +Y YYDP T LNF G
Sbjct: 140 IYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEG 179
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P W H VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P W H VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+ +Y+ +PTW NH +F GL +Y Y+ T+ L+ +G
Sbjct: 125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNG 165
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+ NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 16/113 (14%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT----------PGGHGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
+R F T + +++ P+ VF AGL V+ Y YYD L+F
Sbjct: 107 LRVAADFLAKNTSVKRVWVYNPSSNCSKSVFNSAGLEVREYAYYDAENHTLDF 159
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From
Oryza Sativa L
Length = 702
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 63 LDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNS-SIV 121
L S+ QIVSD+N + V + +G+ + N G + ++ G + +A++S ++V
Sbjct: 584 LSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALV 643
Query: 122 SGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQ 158
G V + + G+ G P + P
Sbjct: 644 FGGHGRVGHDVDHF----TSPEGMPGVPETNFNNRPN 676
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From
Oryza Sativa L
Length = 755
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 63 LDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNS-SIV 121
L S+ QIVSD+N + V + +G+ + N G + ++ G + +A++S ++V
Sbjct: 584 LSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALV 643
Query: 122 SGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQ 158
G V + + G+ G P + P
Sbjct: 644 FGGHGRVGHDVDHF----TSPEGMPGVPETNFNNRPN 676
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 230 GGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDG 289
G + E+T TI LG+++ G + ++++ + C+ + G W+ +ML D
Sbjct: 443 AGMKVVFKEDTNTITDLGILYGGIGATVISADKSCRQLIGRC---------WDEEMLDDA 493
Query: 290 GGDATVATSLLEAS 303
G SLL A+
Sbjct: 494 GKMICEEVSLLMAA 507
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,392,528
Number of Sequences: 62578
Number of extensions: 593891
Number of successful extensions: 1195
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1131
Number of HSP's gapped (non-prelim): 66
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)