BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042911
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37833|AATC_ORYSJ Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp.
japonica GN=Os01g0760600 PE=2 SV=1
Length = 407
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
RTIYIPQPTWGNHPKVFTLAGL+V+SYRYYDPATRGL+F G
Sbjct: 127 RTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQG 167
>sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana
GN=ASP3 PE=1 SV=1
Length = 449
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 429 SRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+TIYI QPTWGNHPK+FTLAGL+VK+YRYYDPATRGLNF G
Sbjct: 168 QKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQG 209
>sp|P28734|AATC_DAUCA Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1
Length = 405
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 431 TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
T+YIPQPTWGNHPK+FTLAGLSVK+YRYY+P TRGL+F G
Sbjct: 126 TVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEG 165
>sp|P46645|AAT2_ARATH Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis
thaliana GN=ASP2 PE=1 SV=2
Length = 405
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 38/50 (76%)
Query: 421 RFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
F + IYIP+PTWGNHPKVF LAGLSV+ +RYYDPATRGL+F G
Sbjct: 116 EFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKG 165
>sp|P28011|AAT1_MEDSA Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2
Length = 418
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 429 SRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
R IY+P PTWGNH KVF LAGL+VK+YRYY PATRGL+F G
Sbjct: 137 QRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQG 178
>sp|P46646|AAT4_ARATH Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis
thaliana GN=ASP4 PE=2 SV=2
Length = 403
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 35/39 (89%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
I++P PTWGNHP++FTLAGLSV+ +RYYDP +RGL+F G
Sbjct: 125 IFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKG 163
>sp|O94320|AATM_SCHPO Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC725.01 PE=3 SV=1
Length = 437
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 429 SRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
S+TIY+ PTWGNH VF+ AGL+VKSY+YYDPATRGL+ G
Sbjct: 157 SKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGLDIKG 198
>sp|Q28F67|AATM_XENTR Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis
GN=got2 PE=2 SV=1
Length = 427
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 389 EDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTL 448
E+C+ S F V+ I G + +R SR +Y+P+P+WGNH +F
Sbjct: 113 ENCDAIQSGRFIT----VQTISGTGSLRVGANFLQRFYKYSRDVYLPKPSWGNHTPIFRD 168
Query: 449 AGLSVKSYRYYDPATRGLNFHG 470
AGL VK YRYYDP T G +F G
Sbjct: 169 AGLEVKGYRYYDPKTCGFDFTG 190
>sp|P12344|AATM_BOVIN Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2
PE=1 SV=2
Length = 430
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +++P+PTWGNH +F AG+ ++SYRYYDP T G +F G
Sbjct: 145 LQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTG 193
>sp|P00505|AATM_HUMAN Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2
PE=1 SV=3
Length = 430
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
NS + + + V+ I G + +R SR +++P+PTWGNH +F AG+ +
Sbjct: 117 NSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQL 176
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 177 QGYRYYDPKTCGFDFTG 193
>sp|P00508|AATM_CHICK Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2
PE=1 SV=2
Length = 423
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +Y+P+P+WGNH +F AGL +++YRYYDP T L+F G
Sbjct: 138 LQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 186
>sp|P00507|AATM_RAT Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus
GN=Got2 PE=1 SV=2
Length = 430
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
NS + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 117 NSEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 176
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 177 QGYRYYDPKTCGFDFSG 193
>sp|Q4R559|AATM_MACFA Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis
GN=GOT2 PE=2 SV=1
Length = 430
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
NS + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 117 NSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 176
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 177 QGYRYYDPKTCGFDFTG 193
>sp|Q5REB0|AATM_PONAB Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2
PE=2 SV=1
Length = 430
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
NS + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 117 NSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 176
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 177 QGYRYYDPKTCGFDFTG 193
>sp|P00506|AATM_PIG Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2
PE=1 SV=2
Length = 430
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +++P+P+WGNH +F AG+ + SYRYYDP T G +F G
Sbjct: 145 LQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTG 193
>sp|Q55F21|AATM_DICDI Aspartate aminotransferase, mitochondrial OS=Dictyostelium
discoideum GN=aatA PE=3 SV=1
Length = 426
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+T Y+P PTWGNH +F AG+ VKSY YY+PAT GLNF
Sbjct: 147 KTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEA 187
>sp|P05202|AATM_MOUSE Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2
PE=1 SV=1
Length = 430
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 394 NSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSV 453
N+ + + + V+ I G + +R SR +++P+P+WGNH +F AG+ +
Sbjct: 117 NNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQL 176
Query: 454 KSYRYYDPATRGLNFHG 470
+ YRYYDP T G +F G
Sbjct: 177 QGYRYYDPKTCGFDFSG 193
>sp|P08907|AATM_HORSE Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2
PE=1 SV=1
Length = 401
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R SR +++P+P+WGNH +F AGL + +YRYYDP T G + G
Sbjct: 116 LQRFFKFSRDVFLPKPSWGNHTPIFRDAGLQLHAYRYYDPKTCGFDVTG 164
>sp|P95468|TYRB_PARDE Aromatic-amino-acid aminotransferase OS=Paracoccus denitrificans
GN=tyrB PE=1 SV=1
Length = 394
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 422 FRRARTISRT------IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
R+A ++R +++ PTW NH + GL V++YRY+D TRG++F G
Sbjct: 104 LRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEG 158
>sp|P46248|AAT5_ARATH Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana
GN=ASP5 PE=1 SV=2
Length = 453
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+ I PTWGNH +F A + YRYYDP T GL+F G
Sbjct: 174 VVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEG 212
>sp|P26563|AATM_LUPAN Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus
angustifolius PE=2 SV=1
Length = 454
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 431 TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+ I PTWGNH +F A + YRYYDP T GL+F G
Sbjct: 174 KVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 213
>sp|P44425|AAT_HAEIN Aspartate aminotransferase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=aspC PE=3 SV=1
Length = 396
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
F + +T ++ ++I PTW NH +F G++++ YRYYD + L++
Sbjct: 113 FIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWE 160
>sp|P46643|AAT1_ARATH Aspartate aminotransferase, mitochondrial OS=Arabidopsis thaliana
GN=ASP1 PE=1 SV=1
Length = 430
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
F++ + IYIP PTW NH ++ A + K+Y YY P T+GL+F
Sbjct: 143 FQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDF 189
>sp|P00503|AATC_PIG Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1
SV=3
Length = 413
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VFT AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQG 173
>sp|P00504|AATC_CHICK Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1
PE=1 SV=3
Length = 412
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF AG +++YRY+D A RGL+ G
Sbjct: 133 VYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQG 172
>sp|P72173|AAT_PSEAE Aspartate aminotransferase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aspC PE=3
SV=2
Length = 398
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 431 TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
T+ I P+W NH +F AG V++YRYYD A+ G+N G
Sbjct: 124 TVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAG 163
>sp|A5A6K8|AATC_PANTR Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1
PE=2 SV=1
Length = 413
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQG 173
>sp|P17174|AATC_HUMAN Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1
PE=1 SV=3
Length = 413
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQG 173
>sp|Q5R691|AATC_PONAB Aspartate aminotransferase, cytoplasmic OS=Pongo abelii GN=GOT1
PE=2 SV=1
Length = 413
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQG 173
>sp|Q4R5L1|AATC_MACFA Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis
GN=GOT1 PE=2 SV=1
Length = 413
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQG 173
>sp|P13221|AATC_RAT Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus
GN=Got1 PE=1 SV=3
Length = 413
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SYRY+D RGL+ G
Sbjct: 134 VYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQG 173
>sp|Q54SF7|AATC_DICDI Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum
GN=aatB PE=3 SV=1
Length = 438
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 402 QICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP 461
++ V+ + G + ++ R+ +YI +P+W NH + +G+ Y YYDP
Sbjct: 130 RMVTVQALSGTGALRIGIIFIRKYLPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDP 189
Query: 462 ATRGLNFHG 470
T+GL+F G
Sbjct: 190 KTKGLDFTG 198
>sp|Q56114|AAT_SALTI Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2
Length = 396
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFEA 161
>sp|P33097|AATC_BOVIN Aspartate aminotransferase, cytoplasmic OS=Bos taurus GN=GOT1 PE=1
SV=3
Length = 413
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF AG ++SY Y+D A RGL+ G
Sbjct: 134 VYVSSPTWENHNGVFIAAGFKDIRSYHYWDAAKRGLDLQG 173
>sp|P58661|AAT_SALTY Aspartate aminotransferase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=aspC PE=3 SV=1
Length = 396
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
Query: 362 LENATTDAH--TKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSV 419
LEN TT + E C ELL +N + T Q P
Sbjct: 57 LENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQT----------PGGTGA 106
Query: 420 VR----FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+R F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 107 LRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHTLDFEA 161
>sp|P00509|AAT_ECOLI Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC
PE=1 SV=1
Length = 396
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
F T + +++ P+W NH VF AGL V+ Y YYD L+F
Sbjct: 113 FLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159
>sp|P08906|AATC_HORSE Aspartate aminotransferase, cytoplasmic OS=Equus caballus GN=GOT1
PE=1 SV=2
Length = 413
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
+Y+ PTW NH VF+ AG ++SY Y+D RGL+ G
Sbjct: 134 VYVSSPTWENHNGVFSGAGFKDIRSYHYWDATKRGLDLQG 173
>sp|P04693|TYRB_ECOLI Aromatic-amino-acid aminotransferase OS=Escherichia coli (strain
K12) GN=tyrB PE=1 SV=1
Length = 397
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
+++ PTW NH +F AG V +Y +YD AT G+ F+
Sbjct: 124 VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN 161
>sp|P74861|TYRB_SALTY Aromatic-amino-acid aminotransferase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=tyrB PE=3 SV=3
Length = 397
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
+++ PTW NH +F AG V +Y +YD AT G+ F+
Sbjct: 124 VWVSDPTWENHIAIFAGAGFEVSTYPWYDDATNGIRFN 161
>sp|P05201|AATC_MOUSE Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1
PE=1 SV=3
Length = 413
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 432 IYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFHG 470
IY+ PTW NH VF+ AG ++ Y Y+D RGL+ G
Sbjct: 134 IYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQG 173
>sp|Q9W092|CHIT2_DROME Probable chitinase 2 OS=Drosophila melanogaster GN=Cht2 PE=1 SV=1
Length = 484
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 50 PVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYIS-GKGNFEILTGVKFNCPVSGCSIAV-- 106
P CT + LD T + L+ +D+ GKG +E +TG+K + P S+A+
Sbjct: 67 PNLCTHVVYAFAGLDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGG 126
Query: 107 --NISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIE 161
S N+S V ++++ G F V Q +SF+ + L + P Q G P E
Sbjct: 127 WNEGSANYSTLVANNLLRGRF--VKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRE 181
>sp|O85746|TYRB_KLEPN Tyrosine aminotransferase OS=Klebsiella pneumoniae GN=tyrB PE=1
SV=1
Length = 397
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFH 469
+++ PTW NH +F AG V +Y ++D AT G+ F
Sbjct: 124 VWVSDPTWENHIAIFEGAGFEVSTYPWFDKATNGVRFE 161
>sp|P23542|AATC_YEAST Aspartate aminotransferase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=AAT2 PE=1 SV=3
Length = 418
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+ +Y+ +PTW NH +F GL +Y Y+ T+ L+ +G
Sbjct: 126 KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNG 166
>sp|Q22067|AATC_CAEEL Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis
elegans GN=T01C8.5 PE=3 SV=1
Length = 408
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 430 RTIYIPQPTWGNHPKVFTLAGL-SVKSYRYYD 460
+T+Y+ PTWGNH VF AG +V Y ++D
Sbjct: 124 KTVYVSNPTWGNHKLVFKKAGFTTVADYTFWD 155
>sp|Q02636|ATTY_RHIME Tyrosine aminotransferase OS=Rhizobium meliloti (strain 1021)
GN=tatA PE=3 SV=1
Length = 389
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 425 ARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 468
AR R I++ P+W NH +F AGL + +Y ++D ++ + F
Sbjct: 112 ARMGGRGIWLGLPSWPNHAPIFKAAGLDIATYDFFDIPSQSVIF 155
>sp|Q01802|AATM_YEAST Aspartate aminotransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AAT1 PE=1
SV=2
Length = 451
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 425 ARTISRTIYIPQPTWGNHPKVFTLAGL-SVKSYRYY 459
A ISR I+IP P+W NH +F G ++ Y YY
Sbjct: 141 ALFISRDIWIPDPSWANHKNIFQNNGFENIYRYSYY 176
>sp|O42652|AATC_SCHPO Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=aat2 PE=3 SV=1
Length = 409
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 432 IYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
+YI PTW H ++ G++V +Y Y+D R ++ G
Sbjct: 131 VYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEG 169
>sp|O87775|HRCA_LACSK Heat-inducible transcription repressor HrcA OS=Lactobacillus sakei
GN=hrcA PE=3 SV=1
Length = 352
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 230 GGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEF-----CKIVYGALCITVKIFLMWNSK 284
GGF L+ F++ A ++ G S+LLN E K +Y + + + +
Sbjct: 213 GGF-LNIFDDVLKQASQERLYVGGQSNLLNFSELTDVSQLKSIYNIINQSDDLAKLLE-- 269
Query: 285 MLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGP 333
L G ++ V L + +LK +S++ N ++G HG+GL LLGP
Sbjct: 270 -LSPGEANSQVQVRLGDEMTNDLLKNYSLMTVNYDVGEHGQGLIALLGP 317
>sp|Q6DB52|USPB_ERWCT Universal stress protein B OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=uspB PE=3 SV=1
Length = 111
Score = 33.5 bits (75), Expect = 3.3, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 227 LEGGGFHLSHFEETKTIAMLGVIFAGTY--SHLLNSIEFCKIVYG------ALC----IT 274
++GGGF SH + +K I ++G I+A Y H I C+ V G ALC I+
Sbjct: 44 VDGGGFFTSHGQPSKQIRLVGYIYAQRYLDHHDPEFIRRCERVRGQFLLTTALCGLIVIS 103
Query: 275 VKIFLMW 281
+ +MW
Sbjct: 104 LIAMMMW 110
>sp|P05769|POLG_MVEV5 Genome polyprotein OS=Murray valley encephalitis virus (strain
MVE-1-51) PE=1 SV=2
Length = 3434
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 214 TMVVVAAVESRWTLEGGGFHLSHFEE-------TKTIAMLGVIFAGTYSHLLNSIEFCKI 266
TM +VA E +GG H EE IA LGV+ AG + ++ K+
Sbjct: 2148 TMYLVATSE-----KGGKAHRMALEELPDALETITLIAALGVMTAGFFLLMMQRKGIGKL 2202
Query: 267 VYGALCITVKIFLMWNS 283
GAL + V F +W S
Sbjct: 2203 GLGALVLVVATFFLWMS 2219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,313,955
Number of Sequences: 539616
Number of extensions: 9077059
Number of successful extensions: 26122
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 25834
Number of HSP's gapped (non-prelim): 306
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)