Query 042913
Match_columns 317
No_of_seqs 372 out of 3370
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 10:53:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042913.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042913hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 1.6E-43 3.4E-48 305.3 17.5 200 96-316 75-277 (364)
2 KOG0595 Serine/threonine-prote 100.0 4.2E-44 9E-49 311.6 13.4 198 98-314 8-211 (429)
3 KOG0598 Ribosomal protein S6 k 100.0 4.5E-43 9.7E-48 302.3 12.4 202 96-315 21-223 (357)
4 KOG0615 Serine/threonine prote 100.0 4.1E-42 8.8E-47 299.2 14.7 201 98-314 170-378 (475)
5 KOG0592 3-phosphoinositide-dep 100.0 3.3E-42 7.1E-47 308.8 13.8 215 96-315 69-285 (604)
6 KOG0575 Polo-like serine/threo 100.0 1.1E-41 2.4E-46 309.7 15.8 198 100-315 18-216 (592)
7 KOG0616 cAMP-dependent protein 100.0 3.2E-41 7E-46 282.4 12.4 198 97-315 41-239 (355)
8 KOG0593 Predicted protein kina 100.0 1.3E-41 2.9E-46 285.5 6.8 200 100-316 2-201 (396)
9 KOG0591 NIMA (never in mitosis 100.0 1E-42 2.2E-47 289.6 -0.4 206 92-313 11-224 (375)
10 KOG0605 NDR and related serine 100.0 5.2E-40 1.1E-44 294.6 12.6 217 96-315 137-386 (550)
11 KOG0610 Putative serine/threon 100.0 4.9E-39 1.1E-43 280.2 16.4 239 73-313 51-331 (459)
12 KOG0600 Cdc2-related protein k 100.0 9.1E-40 2E-44 290.9 11.0 204 97-316 114-319 (560)
13 KOG1187 Serine/threonine prote 100.0 3.6E-38 7.7E-43 284.8 18.2 210 76-314 61-275 (361)
14 KOG0198 MEKK and related serin 100.0 2.2E-38 4.9E-43 276.8 15.5 201 100-315 17-220 (313)
15 KOG0583 Serine/threonine prote 100.0 2.5E-38 5.4E-43 286.4 15.0 205 96-316 13-223 (370)
16 KOG0659 Cdk activating kinase 100.0 9E-39 2E-43 264.1 9.6 200 100-316 2-201 (318)
17 KOG0597 Serine-threonine prote 100.0 2.9E-39 6.3E-44 290.8 7.1 197 100-315 2-198 (808)
18 KOG0585 Ca2+/calmodulin-depend 100.0 2.1E-37 4.6E-42 273.9 18.6 215 92-315 89-318 (576)
19 KOG0582 Ste20-like serine/thre 100.0 2.2E-37 4.8E-42 272.1 17.0 211 95-316 21-232 (516)
20 KOG0192 Tyrosine kinase specif 100.0 5.1E-38 1.1E-42 282.2 13.4 205 95-315 36-245 (362)
21 KOG0694 Serine/threonine prote 100.0 7.8E-37 1.7E-41 281.3 18.7 202 95-315 363-566 (694)
22 KOG0578 p21-activated serine/t 100.0 6.7E-37 1.5E-41 276.5 15.7 197 98-315 271-467 (550)
23 KOG0661 MAPK related serine/th 100.0 1.5E-38 3.3E-43 281.3 3.7 201 97-316 7-209 (538)
24 cd05629 STKc_NDR_like_fungal C 100.0 4.7E-36 1E-40 275.3 19.2 208 100-315 1-246 (377)
25 cd05628 STKc_NDR1 Catalytic do 100.0 3.2E-36 6.9E-41 275.0 17.3 207 100-314 1-233 (363)
26 KOG0667 Dual-specificity tyros 100.0 1.3E-36 2.9E-41 279.2 14.7 194 100-316 186-387 (586)
27 PLN00034 mitogen-activated pro 100.0 7.9E-36 1.7E-40 271.4 19.5 202 96-315 70-272 (353)
28 cd05598 STKc_LATS Catalytic do 100.0 7.1E-36 1.5E-40 274.0 19.2 206 100-313 1-240 (376)
29 KOG0611 Predicted serine/threo 100.0 9.1E-38 2E-42 271.6 6.0 199 98-315 51-252 (668)
30 cd05599 STKc_NDR_like Catalyti 100.0 5E-36 1.1E-40 273.8 17.8 207 100-314 1-236 (364)
31 PTZ00263 protein kinase A cata 100.0 4.9E-36 1.1E-40 270.2 16.9 198 96-314 14-212 (329)
32 cd05624 STKc_MRCK_beta Catalyt 100.0 9.3E-36 2E-40 268.6 18.7 205 100-315 1-207 (331)
33 KOG0663 Protein kinase PITSLRE 100.0 2.2E-37 4.7E-42 263.3 7.3 205 95-316 71-277 (419)
34 cd05597 STKc_DMPK_like Catalyt 100.0 9.8E-36 2.1E-40 268.5 18.0 205 100-315 1-207 (331)
35 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.4E-35 3E-40 267.7 18.6 194 100-314 1-195 (333)
36 cd05601 STKc_CRIK Catalytic do 100.0 2.1E-35 4.5E-40 266.2 19.6 205 100-315 1-208 (330)
37 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-35 2.4E-40 273.2 18.2 206 101-314 2-245 (381)
38 PTZ00426 cAMP-dependent protei 100.0 1E-35 2.3E-40 269.1 17.3 200 95-314 25-225 (340)
39 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-35 3.4E-40 272.3 18.5 207 101-315 2-246 (382)
40 cd05571 STKc_PKB Catalytic dom 100.0 1.8E-35 3.9E-40 265.9 18.3 192 106-315 1-194 (323)
41 cd05621 STKc_ROCK2 Catalytic d 100.0 1.2E-35 2.7E-40 271.6 17.0 207 94-314 37-244 (370)
42 cd05627 STKc_NDR2 Catalytic do 100.0 4E-35 8.6E-40 267.5 19.6 207 100-314 1-233 (360)
43 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-36 3.1E-41 261.7 9.2 202 99-316 10-220 (323)
44 cd05622 STKc_ROCK1 Catalytic d 100.0 2.7E-35 5.9E-40 269.5 18.0 209 92-314 35-244 (371)
45 KOG0589 Serine/threonine prote 100.0 6.7E-37 1.5E-41 274.3 7.1 199 99-313 3-202 (426)
46 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-35 5.9E-40 269.4 17.7 209 92-314 35-244 (370)
47 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.3E-35 5E-40 267.9 16.9 208 100-315 1-229 (350)
48 KOG0580 Serine/threonine prote 100.0 3.4E-37 7.3E-42 251.2 4.3 203 95-315 17-220 (281)
49 cd05623 STKc_MRCK_alpha Cataly 100.0 3.7E-35 8E-40 264.8 17.7 205 100-315 1-207 (332)
50 cd05612 STKc_PRKX_like Catalyt 100.0 6.5E-36 1.4E-40 264.9 12.4 194 100-314 1-195 (291)
51 cd05631 STKc_GRK4 Catalytic do 100.0 3.7E-35 8E-40 259.3 16.7 198 101-315 1-200 (285)
52 KOG0579 Ste20-like serine/thre 100.0 1.7E-37 3.7E-42 282.5 1.8 202 100-315 32-233 (1187)
53 KOG0201 Serine/threonine prote 100.0 5.7E-37 1.2E-41 269.1 4.4 197 100-315 13-209 (467)
54 KOG0660 Mitogen-activated prot 100.0 6.2E-36 1.3E-40 257.3 9.9 202 99-316 21-227 (359)
55 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-34 2.4E-39 261.3 17.4 192 106-315 1-194 (328)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-34 4.4E-39 259.3 18.9 192 106-315 1-195 (325)
57 KOG0588 Serine/threonine prote 100.0 1.1E-35 2.5E-40 272.2 9.9 199 99-316 11-212 (786)
58 KOG0193 Serine/threonine prote 100.0 5.3E-35 1.2E-39 265.5 14.2 208 93-316 385-593 (678)
59 KOG0658 Glycogen synthase kina 100.0 5.7E-36 1.2E-40 258.0 7.3 197 97-316 21-225 (364)
60 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-34 2.4E-39 260.7 16.0 192 106-315 1-194 (323)
61 cd05614 STKc_MSK2_N N-terminal 100.0 3.7E-34 8.1E-39 258.3 18.6 198 101-313 1-203 (332)
62 KOG0690 Serine/threonine prote 100.0 8.6E-36 1.9E-40 252.9 7.3 205 94-316 162-368 (516)
63 KOG0983 Mitogen-activated prot 100.0 1.2E-34 2.5E-39 240.8 13.5 200 97-313 89-290 (391)
64 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-34 8.1E-39 257.4 17.0 196 101-314 1-198 (324)
65 cd05585 STKc_YPK1_like Catalyt 100.0 2.8E-34 6E-39 256.9 16.0 189 108-314 1-190 (312)
66 cd05582 STKc_RSK_N N-terminal 100.0 4.9E-34 1.1E-38 256.0 17.5 193 106-315 2-197 (318)
67 cd05589 STKc_PKN Catalytic dom 100.0 3.7E-34 8.1E-39 257.4 16.5 195 102-315 1-200 (324)
68 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-34 5.3E-39 260.5 14.7 198 98-315 33-236 (382)
69 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.3E-34 5.1E-39 254.5 14.1 200 98-315 3-202 (288)
70 cd05616 STKc_cPKC_beta Catalyt 100.0 5.4E-34 1.2E-38 256.3 16.7 197 101-315 1-200 (323)
71 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.3E-34 7.1E-39 255.4 14.5 198 99-314 4-201 (303)
72 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-34 5.5E-39 253.8 13.7 199 100-315 1-199 (287)
73 cd05588 STKc_aPKC Catalytic do 100.0 5.1E-34 1.1E-38 257.1 15.6 192 106-315 1-195 (329)
74 PTZ00284 protein kinase; Provi 100.0 2.2E-33 4.7E-38 264.5 20.6 194 97-315 126-343 (467)
75 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.8E-34 8.2E-39 258.5 14.7 201 101-315 1-206 (338)
76 cd05591 STKc_nPKC_epsilon Cata 100.0 6.7E-34 1.5E-38 255.5 15.9 191 106-314 1-193 (321)
77 cd05575 STKc_SGK Catalytic dom 100.0 1.4E-33 3E-38 253.7 18.0 191 106-314 1-193 (323)
78 cd05605 STKc_GRK4_like Catalyt 100.0 9.4E-34 2E-38 250.3 16.6 196 101-313 1-197 (285)
79 PHA03212 serine/threonine kina 100.0 5.2E-34 1.1E-38 262.4 15.5 193 96-314 88-280 (391)
80 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-34 6.8E-39 259.3 13.7 204 96-313 3-273 (338)
81 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-33 2.3E-38 254.4 16.8 192 106-314 2-197 (323)
82 cd05618 STKc_aPKC_iota Catalyt 100.0 8.5E-34 1.9E-38 255.6 16.2 190 106-313 1-192 (329)
83 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-33 2.9E-38 253.5 17.3 192 106-315 1-194 (321)
84 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-33 2.4E-38 254.4 16.8 192 106-315 1-194 (325)
85 cd05592 STKc_nPKC_theta_delta 100.0 6.6E-34 1.4E-38 255.0 15.0 192 106-315 1-195 (316)
86 cd05604 STKc_SGK3 Catalytic do 100.0 2.1E-33 4.5E-38 252.7 17.7 191 106-314 1-193 (325)
87 PHA03207 serine/threonine kina 100.0 2.2E-33 4.9E-38 258.8 18.3 199 94-315 86-286 (392)
88 cd05590 STKc_nPKC_eta Catalyti 100.0 9.3E-34 2E-38 254.4 15.2 192 106-315 1-195 (320)
89 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-33 2.7E-38 254.0 15.8 196 101-314 1-198 (323)
90 cd07862 STKc_CDK6 Catalytic do 100.0 8.6E-34 1.9E-38 250.8 14.6 199 100-315 1-207 (290)
91 KOG0586 Serine/threonine prote 100.0 2.4E-33 5.2E-38 255.6 17.0 202 96-316 52-255 (596)
92 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.8E-33 3.8E-38 253.4 15.9 190 106-313 1-192 (327)
93 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-33 6E-38 252.5 16.9 196 97-313 2-198 (331)
94 KOG4250 TANK binding protein k 100.0 1.5E-34 3.2E-39 267.1 8.6 197 101-315 14-223 (732)
95 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-33 3.6E-38 252.3 15.3 192 106-315 1-195 (316)
96 KOG0574 STE20-like serine/thre 100.0 7E-36 1.5E-40 251.1 -0.2 194 101-315 34-227 (502)
97 cd05586 STKc_Sck1_like Catalyt 100.0 4.2E-33 9.1E-38 251.2 17.4 191 108-315 1-196 (330)
98 cd07876 STKc_JNK2 Catalytic do 100.0 3E-33 6.4E-38 255.1 15.9 194 98-313 19-218 (359)
99 PTZ00267 NIMA-related protein 100.0 4E-33 8.6E-38 263.1 17.2 202 99-315 66-270 (478)
100 cd05096 PTKc_DDR1 Catalytic do 100.0 3.4E-33 7.5E-38 248.8 15.3 202 97-312 2-235 (304)
101 cd05608 STKc_GRK1 Catalytic do 100.0 3.3E-33 7.1E-38 246.2 14.8 190 108-313 1-193 (280)
102 KOG0612 Rho-associated, coiled 100.0 4.7E-35 1E-39 281.2 2.8 205 94-315 69-280 (1317)
103 KOG1006 Mitogen-activated prot 100.0 2.9E-35 6.2E-40 243.4 0.9 202 97-315 61-268 (361)
104 cd05570 STKc_PKC Catalytic dom 100.0 4.2E-33 9.1E-38 250.0 15.0 192 106-315 1-195 (318)
105 cd05619 STKc_nPKC_theta Cataly 100.0 5.4E-33 1.2E-37 249.0 15.3 192 106-315 1-195 (316)
106 PHA03210 serine/threonine kina 100.0 3.6E-33 7.8E-38 264.5 14.8 203 96-313 144-364 (501)
107 cd06650 PKc_MEK1 Catalytic dom 100.0 5.6E-33 1.2E-37 250.7 15.4 198 97-315 2-201 (333)
108 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-32 2.4E-37 243.4 16.7 198 101-315 1-200 (285)
109 PF00069 Pkinase: Protein kina 100.0 2.8E-33 6.1E-38 243.1 12.6 197 102-315 1-198 (260)
110 cd07853 STKc_NLK Catalytic dom 100.0 3.7E-33 8E-38 255.7 14.0 198 101-315 1-203 (372)
111 cd05607 STKc_GRK7 Catalytic do 100.0 7.5E-33 1.6E-37 243.5 15.4 191 108-315 1-193 (277)
112 PRK13184 pknD serine/threonine 100.0 8.5E-33 1.9E-37 270.4 17.3 208 100-313 2-227 (932)
113 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.4E-33 1.8E-37 241.7 15.1 203 97-315 2-208 (266)
114 PTZ00283 serine/threonine prot 100.0 5.7E-33 1.2E-37 262.6 15.0 205 97-315 29-244 (496)
115 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-33 3.5E-38 253.6 10.7 200 94-312 200-399 (468)
116 KOG0986 G protein-coupled rece 100.0 1.4E-33 3.1E-38 248.4 9.9 202 95-313 180-382 (591)
117 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-32 2.6E-37 243.3 15.9 198 101-315 1-200 (285)
118 PTZ00266 NIMA-related protein 100.0 1.1E-32 2.4E-37 270.7 16.7 209 92-315 5-242 (1021)
119 KOG0984 Mitogen-activated prot 100.0 8.8E-34 1.9E-38 226.7 7.2 205 96-315 42-251 (282)
120 cd08529 STKc_FA2-like Catalyti 100.0 1.9E-32 4.1E-37 237.5 15.9 199 101-315 1-200 (256)
121 KOG0587 Traf2- and Nck-interac 100.0 1.9E-32 4E-37 257.8 16.8 204 99-316 18-228 (953)
122 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-32 2.8E-37 245.7 15.2 200 98-315 4-203 (309)
123 PTZ00036 glycogen synthase kin 100.0 1E-32 2.2E-37 257.6 15.0 195 98-315 64-269 (440)
124 cd07863 STKc_CDK4 Catalytic do 100.0 1E-32 2.2E-37 243.6 14.1 197 101-315 1-205 (288)
125 cd07874 STKc_JNK3 Catalytic do 100.0 1E-32 2.2E-37 251.2 14.0 195 97-313 14-214 (355)
126 PHA03211 serine/threonine kina 100.0 2.4E-32 5.2E-37 255.1 16.5 192 98-313 167-358 (461)
127 cd08219 STKc_Nek3 Catalytic do 100.0 9.9E-32 2.2E-36 233.2 19.0 197 101-314 1-197 (255)
128 cd07875 STKc_JNK1 Catalytic do 100.0 1.8E-32 3.8E-37 250.5 14.7 194 98-313 22-221 (364)
129 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-32 7.1E-37 241.1 16.0 205 97-315 9-213 (292)
130 cd05574 STKc_phototropin_like 100.0 4.2E-32 9E-37 243.1 16.8 210 100-315 1-231 (316)
131 KOG4279 Serine/threonine prote 100.0 4.2E-33 9.1E-38 256.2 10.4 192 107-315 582-776 (1226)
132 cd06643 STKc_SLK Catalytic dom 100.0 3.8E-32 8.3E-37 239.4 16.1 200 102-315 7-206 (282)
133 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-32 2.5E-37 252.4 13.2 204 96-313 34-311 (374)
134 KOG0662 Cyclin-dependent kinas 100.0 1.4E-33 3E-38 221.3 6.0 199 101-316 3-202 (292)
135 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-32 2.9E-37 252.1 12.9 204 96-313 31-313 (375)
136 cd06646 STKc_MAP4K5 Catalytic 100.0 3.2E-32 6.8E-37 237.9 14.3 199 98-313 7-205 (267)
137 cd05580 STKc_PKA Catalytic dom 100.0 6.8E-32 1.5E-36 238.9 16.6 194 100-314 1-195 (290)
138 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-32 6E-37 245.6 14.3 204 104-314 2-207 (327)
139 cd06625 STKc_MEKK3_like Cataly 100.0 5.5E-32 1.2E-36 235.7 15.7 199 100-313 2-203 (263)
140 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-32 3.2E-37 248.9 12.5 194 99-314 14-213 (343)
141 cd06611 STKc_SLK_like Catalyti 100.0 1.8E-32 4E-37 241.1 12.4 201 100-314 5-205 (280)
142 KOG0599 Phosphorylase kinase g 100.0 1.6E-33 3.5E-38 233.9 5.2 202 100-315 17-226 (411)
143 cd05072 PTKc_Lyn Catalytic dom 100.0 5.5E-32 1.2E-36 235.6 15.0 200 97-315 3-204 (261)
144 cd05052 PTKc_Abl Catalytic dom 100.0 5.1E-32 1.1E-36 236.2 14.6 199 97-313 3-202 (263)
145 KOG1989 ARK protein kinase fam 100.0 7.6E-33 1.6E-37 261.8 10.1 205 97-310 34-251 (738)
146 cd05068 PTKc_Frk_like Catalyti 100.0 8.5E-32 1.8E-36 234.5 15.5 198 97-313 3-201 (261)
147 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.6E-32 1.6E-36 234.1 15.0 198 98-315 2-201 (256)
148 KOG0033 Ca2+/calmodulin-depend 100.0 8.7E-35 1.9E-39 238.0 -3.2 200 97-315 8-211 (355)
149 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-33 3.1E-38 274.3 4.5 204 101-315 1236-1440(1509)
150 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.8E-32 1.5E-36 248.8 15.5 207 95-315 32-339 (400)
151 cd07861 STKc_CDK1_euk Catalyti 100.0 6.3E-32 1.4E-36 238.1 14.6 199 101-315 1-200 (285)
152 cd08221 STKc_Nek9 Catalytic do 100.0 1.1E-31 2.3E-36 233.0 15.8 197 101-313 1-197 (256)
153 cd08223 STKc_Nek4 Catalytic do 100.0 1.7E-31 3.6E-36 231.8 16.8 197 101-313 1-198 (257)
154 cd05108 PTKc_EGFR Catalytic do 100.0 8.6E-32 1.9E-36 241.2 15.1 200 97-313 4-208 (316)
155 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-31 2.3E-36 236.7 15.3 204 97-314 2-224 (283)
156 cd06645 STKc_MAP4K3 Catalytic 100.0 5.4E-32 1.2E-36 236.4 13.0 199 98-313 7-205 (267)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 1.8E-31 3.9E-36 234.9 16.2 189 100-313 1-189 (279)
158 cd05088 PTKc_Tie2 Catalytic do 100.0 1.4E-31 3.1E-36 238.5 15.6 202 96-315 3-223 (303)
159 KOG0194 Protein tyrosine kinas 100.0 9.9E-32 2.1E-36 245.3 14.8 202 95-312 152-357 (474)
160 cd05609 STKc_MAST Catalytic do 100.0 2.9E-31 6.3E-36 236.6 17.5 208 100-315 1-215 (305)
161 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-31 2.6E-36 238.5 15.0 200 98-315 4-203 (301)
162 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-31 4E-36 233.2 15.7 204 98-315 2-209 (267)
163 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-31 2.7E-36 233.0 14.4 198 98-315 2-201 (256)
164 cd06637 STKc_TNIK Catalytic do 100.0 8.2E-32 1.8E-36 235.8 13.2 200 100-313 6-212 (272)
165 KOG0604 MAP kinase-activated p 100.0 2.8E-32 6.2E-37 229.1 9.8 193 99-315 60-261 (400)
166 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-31 5.4E-36 232.0 16.2 201 100-315 2-208 (265)
167 cd06615 PKc_MEK Catalytic doma 100.0 2.5E-31 5.3E-36 237.4 16.3 193 100-313 1-194 (308)
168 KOG4236 Serine/threonine prote 100.0 5E-32 1.1E-36 242.6 11.7 192 106-315 570-765 (888)
169 cd08228 STKc_Nek6 Catalytic do 100.0 1.9E-31 4.2E-36 232.8 15.3 200 100-315 2-205 (267)
170 KOG0596 Dual specificity; seri 100.0 1.1E-31 2.5E-36 241.5 13.8 205 96-313 357-568 (677)
171 PHA03209 serine/threonine kina 100.0 9E-32 1.9E-36 245.1 12.9 189 98-313 64-252 (357)
172 cd05033 PTKc_EphR Catalytic do 100.0 3.1E-31 6.7E-36 231.6 15.8 201 98-313 2-205 (266)
173 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-31 3.3E-36 235.6 13.9 204 97-314 2-224 (283)
174 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-31 7E-36 233.6 15.9 199 101-315 1-199 (286)
175 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-31 2.5E-36 236.7 13.0 202 100-315 1-206 (286)
176 cd06613 STKc_MAP4K3_like Catal 100.0 5.5E-31 1.2E-35 229.1 17.1 200 99-314 2-201 (262)
177 KOG0577 Serine/threonine prote 100.0 8.7E-33 1.9E-37 250.2 5.7 194 101-313 27-221 (948)
178 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-31 5.7E-36 234.9 15.1 203 97-314 2-220 (288)
179 cd05065 PTKc_EphR_B Catalytic 100.0 5.3E-31 1.1E-35 230.5 16.7 203 98-313 2-208 (269)
180 cd06638 STKc_myosinIIIA Cataly 100.0 3.7E-31 8E-36 233.4 15.9 204 98-315 16-228 (286)
181 KOG4717 Serine/threonine prote 100.0 2.9E-32 6.3E-37 243.5 8.8 201 98-315 16-217 (864)
182 cd07868 STKc_CDK8 Catalytic do 100.0 2E-31 4.3E-36 238.8 14.3 195 105-315 6-214 (317)
183 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.7E-31 1E-35 232.3 16.2 201 100-315 1-206 (283)
184 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.9E-31 8.4E-36 233.1 15.6 198 100-313 4-206 (283)
185 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.9E-31 1.1E-35 232.5 16.2 200 99-313 3-207 (284)
186 cd05062 PTKc_IGF-1R Catalytic 100.0 2.9E-31 6.4E-36 233.2 14.7 202 97-312 3-216 (277)
187 cd05075 PTKc_Axl Catalytic dom 100.0 2.9E-31 6.2E-36 232.4 14.5 197 103-313 2-211 (272)
188 cd07839 STKc_CDK5 Catalytic do 100.0 7E-32 1.5E-36 237.8 10.7 198 101-315 1-199 (284)
189 cd05032 PTKc_InsR_like Catalyt 100.0 4.1E-31 8.8E-36 232.0 15.5 203 97-313 3-218 (277)
190 KOG0607 MAP kinase-interacting 100.0 1.1E-32 2.4E-37 233.5 5.1 201 106-314 84-288 (463)
191 cd05035 PTKc_Axl_like Catalyti 100.0 3.3E-31 7.2E-36 231.8 14.8 199 102-313 1-212 (273)
192 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.7E-31 1.7E-35 231.4 17.2 200 100-313 4-208 (284)
193 cd05109 PTKc_HER2 Catalytic do 100.0 4.6E-31 1E-35 232.1 15.5 200 97-313 4-208 (279)
194 cd05034 PTKc_Src_like Catalyti 100.0 3.2E-31 7E-36 230.7 14.3 198 97-313 3-201 (261)
195 cd05071 PTKc_Src Catalytic dom 100.0 3.5E-31 7.6E-36 230.9 14.6 197 97-313 3-200 (262)
196 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-31 2.7E-36 233.3 11.6 198 99-315 5-204 (261)
197 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.5E-31 9.8E-36 232.7 15.2 198 100-314 1-198 (286)
198 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.3E-31 7.1E-36 230.6 14.1 197 97-313 3-200 (260)
199 cd05059 PTKc_Tec_like Catalyti 100.0 2.4E-31 5.2E-36 231.1 12.9 195 99-313 3-198 (256)
200 cd06654 STKc_PAK1 Catalytic do 100.0 7.7E-31 1.7E-35 232.9 16.4 195 99-314 19-213 (296)
201 cd05073 PTKc_Hck Catalytic dom 100.0 9.4E-31 2E-35 227.9 16.4 198 96-313 2-200 (260)
202 cd05049 PTKc_Trk Catalytic dom 100.0 2.3E-31 4.9E-36 234.0 12.6 204 98-315 3-224 (280)
203 cd05053 PTKc_FGFR Catalytic do 100.0 9.8E-31 2.1E-35 231.6 16.8 204 95-312 7-229 (293)
204 cd05054 PTKc_VEGFR Catalytic d 100.0 1.7E-31 3.6E-36 241.5 12.1 203 97-313 4-272 (337)
205 PHA02988 hypothetical protein; 100.0 2.6E-31 5.7E-36 234.5 13.0 189 106-315 26-221 (283)
206 cd08220 STKc_Nek8 Catalytic do 100.0 6.4E-31 1.4E-35 227.9 15.1 196 101-313 1-197 (256)
207 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.6E-31 9.9E-36 235.5 14.5 203 96-312 14-237 (307)
208 cd06656 STKc_PAK3 Catalytic do 100.0 5.8E-31 1.3E-35 233.8 15.1 196 99-315 18-213 (297)
209 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.8E-31 1.9E-35 228.3 15.9 204 100-315 1-206 (267)
210 cd05055 PTKc_PDGFR Catalytic d 100.0 5.9E-31 1.3E-35 234.4 15.1 207 95-315 30-243 (302)
211 cd07833 STKc_CDKL Catalytic do 100.0 5.5E-31 1.2E-35 232.4 14.7 200 100-315 1-200 (288)
212 cd08218 STKc_Nek1 Catalytic do 100.0 8.4E-31 1.8E-35 227.4 15.6 198 101-314 1-198 (256)
213 cd05116 PTKc_Syk Catalytic dom 100.0 5.5E-31 1.2E-35 228.9 14.4 192 107-313 2-195 (257)
214 cd07841 STKc_CDK7 Catalytic do 100.0 5E-31 1.1E-35 234.1 14.4 198 101-315 1-201 (298)
215 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.4E-31 1.6E-35 232.2 15.5 198 100-315 5-202 (291)
216 cd05094 PTKc_TrkC Catalytic do 100.0 8.9E-31 1.9E-35 231.8 16.0 204 97-315 2-225 (291)
217 cd05089 PTKc_Tie1 Catalytic do 100.0 7.6E-31 1.7E-35 233.0 15.6 198 100-315 2-218 (297)
218 cd08229 STKc_Nek7 Catalytic do 100.0 2.7E-31 5.8E-36 231.9 12.4 200 100-315 2-205 (267)
219 KOG0671 LAMMER dual specificit 100.0 6.6E-31 1.4E-35 227.4 14.5 202 91-315 80-307 (415)
220 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.5E-31 7.6E-36 244.0 13.8 209 94-316 31-342 (401)
221 cd05042 PTKc_Aatyk Catalytic d 100.0 3.9E-31 8.4E-36 231.3 13.3 200 107-315 2-209 (269)
222 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.3E-31 1.6E-35 229.0 15.0 198 100-313 2-202 (267)
223 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-31 7.6E-36 230.1 12.9 196 101-315 1-198 (258)
224 cd07844 STKc_PCTAIRE_like Cata 100.0 7.4E-31 1.6E-35 232.2 15.0 198 99-314 4-201 (291)
225 cd06630 STKc_MEKK1 Catalytic d 100.0 4.3E-31 9.3E-36 230.7 13.2 200 101-314 1-205 (268)
226 cd05084 PTKc_Fes Catalytic dom 100.0 6.3E-31 1.4E-35 227.8 14.1 191 107-313 2-193 (252)
227 cd05092 PTKc_TrkA Catalytic do 100.0 7.5E-31 1.6E-35 231.0 14.8 202 97-313 2-221 (280)
228 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.3E-31 1.6E-35 229.2 14.4 201 101-313 1-208 (267)
229 cd07846 STKc_CDKL2_3 Catalytic 100.0 3E-31 6.5E-36 233.9 12.1 199 100-315 1-199 (286)
230 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.8E-31 1.7E-35 233.7 14.8 204 95-312 10-234 (304)
231 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-30 3E-35 229.2 16.1 201 99-313 3-208 (284)
232 cd05061 PTKc_InsR Catalytic do 100.0 8.6E-31 1.9E-35 231.6 14.8 202 97-312 3-216 (288)
233 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-30 2.5E-35 228.1 15.5 199 100-313 2-205 (266)
234 cd05069 PTKc_Yes Catalytic dom 100.0 8.7E-31 1.9E-35 228.1 14.6 199 97-315 3-203 (260)
235 cd06608 STKc_myosinIII_like Ca 100.0 8.6E-31 1.9E-35 229.2 14.7 201 99-313 5-214 (275)
236 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.5E-31 2.1E-35 228.7 14.9 205 97-315 2-210 (268)
237 KOG1163 Casein kinase (serine/ 100.0 3.2E-31 7E-36 216.7 11.0 206 95-315 10-220 (341)
238 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-30 3.2E-35 227.2 16.0 199 100-313 2-205 (264)
239 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-31 5.2E-36 234.4 11.1 204 97-314 2-224 (283)
240 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.1E-31 1.8E-35 230.9 14.3 202 99-314 15-223 (282)
241 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-30 4E-35 226.0 16.4 204 101-315 1-205 (264)
242 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-30 3.6E-35 228.6 16.3 200 97-313 4-208 (279)
243 PLN00009 cyclin-dependent kina 100.0 1.4E-30 3E-35 230.8 15.8 200 100-315 2-202 (294)
244 cd05045 PTKc_RET Catalytic dom 100.0 8.5E-31 1.8E-35 231.8 14.3 199 101-313 1-226 (290)
245 cd07843 STKc_CDC2L1 Catalytic 100.0 5.8E-31 1.2E-35 233.2 13.0 200 99-315 4-205 (293)
246 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-30 2.4E-35 235.8 15.2 204 95-312 7-231 (334)
247 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-31 7.8E-36 233.5 11.5 198 97-315 2-201 (284)
248 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-30 2.5E-35 227.8 14.5 200 101-313 1-204 (265)
249 cd05097 PTKc_DDR_like Catalyti 100.0 6.5E-31 1.4E-35 233.2 13.2 201 98-312 3-226 (295)
250 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.9E-31 2.1E-35 228.9 14.0 200 107-315 2-209 (269)
251 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.9E-31 1.3E-35 238.5 12.9 203 97-313 4-278 (343)
252 cd07850 STKc_JNK Catalytic dom 100.0 1.2E-30 2.7E-35 237.3 15.1 194 98-313 14-213 (353)
253 cd05040 PTKc_Ack_like Catalyti 100.0 9.7E-31 2.1E-35 227.1 13.7 196 106-315 1-200 (257)
254 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.2E-31 1.8E-35 228.2 13.0 197 97-313 3-200 (260)
255 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-30 3.2E-35 230.7 14.9 201 98-312 3-227 (296)
256 cd06639 STKc_myosinIIIB Cataly 100.0 3E-30 6.5E-35 228.4 16.7 202 99-314 21-230 (291)
257 cd06655 STKc_PAK2 Catalytic do 100.0 2.1E-30 4.5E-35 230.2 15.8 195 99-314 18-212 (296)
258 cd07860 STKc_CDK2_3 Catalytic 100.0 7.4E-31 1.6E-35 231.3 12.7 197 101-313 1-197 (284)
259 cd05082 PTKc_Csk Catalytic dom 100.0 1.2E-30 2.6E-35 226.6 13.8 194 97-315 3-199 (256)
260 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-30 3E-35 231.2 14.3 201 98-312 3-227 (296)
261 PF07714 Pkinase_Tyr: Protein 100.0 8.2E-31 1.8E-35 228.4 12.4 199 103-315 2-205 (259)
262 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-30 3.5E-35 232.2 14.6 201 98-315 5-207 (309)
263 cd07867 STKc_CDC2L6 Catalytic 100.0 1.6E-30 3.4E-35 232.8 14.5 195 105-315 6-214 (317)
264 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.7E-30 3.7E-35 232.6 14.4 203 96-312 8-231 (314)
265 cd05111 PTK_HER3 Pseudokinase 100.0 1.6E-30 3.4E-35 228.9 13.9 200 97-313 4-208 (279)
266 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.7E-30 5.8E-35 226.3 15.2 199 101-313 2-208 (272)
267 cd05039 PTKc_Csk_like Catalyti 100.0 2E-30 4.3E-35 225.1 14.2 193 97-313 3-196 (256)
268 cd05577 STKc_GRK Catalytic dom 100.0 2E-30 4.4E-35 227.9 14.3 191 108-315 1-193 (277)
269 cd06609 STKc_MST3_like Catalyt 100.0 1.8E-30 3.8E-35 227.8 13.9 195 100-314 1-195 (274)
270 cd00192 PTKc Catalytic domain 100.0 1.9E-30 4.2E-35 225.1 14.0 193 106-312 1-202 (262)
271 cd05085 PTKc_Fer Catalytic dom 100.0 3.6E-30 7.9E-35 222.6 15.3 191 107-315 2-194 (250)
272 cd05115 PTKc_Zap-70 Catalytic 100.0 3.1E-30 6.8E-35 224.4 14.9 194 107-315 2-198 (257)
273 cd07865 STKc_CDK9 Catalytic do 100.0 2.8E-30 6E-35 230.3 14.8 205 98-315 10-222 (310)
274 cd05613 STKc_MSK1_N N-terminal 100.0 4.6E-30 9.9E-35 227.1 15.9 201 101-315 1-207 (290)
275 KOG0614 cGMP-dependent protein 100.0 1E-32 2.2E-37 245.9 -1.1 202 95-315 415-617 (732)
276 cd05046 PTK_CCK4 Pseudokinase 100.0 2.6E-30 5.6E-35 226.8 13.8 200 98-312 3-213 (275)
277 cd06658 STKc_PAK5 Catalytic do 100.0 6.3E-31 1.4E-35 233.1 10.0 195 100-315 22-217 (292)
278 KOG1164 Casein kinase (serine/ 100.0 2.1E-30 4.5E-35 232.7 13.4 206 101-315 19-236 (322)
279 PHA02882 putative serine/threo 100.0 3.9E-30 8.5E-35 228.2 15.0 208 96-315 8-232 (294)
280 cd08215 STKc_Nek Catalytic dom 100.0 4.9E-30 1.1E-34 222.1 15.2 197 101-313 1-199 (258)
281 cd05060 PTKc_Syk_like Catalyti 100.0 3.2E-30 7E-35 224.0 14.1 192 106-313 1-195 (257)
282 cd06627 STKc_Cdc7_like Catalyt 100.0 7.3E-30 1.6E-34 220.8 16.2 195 101-313 1-195 (254)
283 cd08226 PK_STRAD_beta Pseudoki 100.0 2.1E-30 4.6E-35 233.4 13.3 202 106-314 4-207 (328)
284 cd06632 STKc_MEKK1_plant Catal 100.0 4.1E-30 8.9E-35 223.0 14.4 195 101-313 1-198 (258)
285 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-30 4.6E-35 225.0 12.6 185 106-313 1-202 (259)
286 KOG2345 Serine/threonine prote 100.0 2.1E-31 4.6E-36 218.4 5.8 212 96-313 17-237 (302)
287 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4E-30 8.7E-35 224.4 14.3 188 107-315 2-209 (262)
288 cd07837 STKc_CdkB_plant Cataly 100.0 3.8E-30 8.3E-35 228.0 14.4 199 100-314 1-209 (295)
289 cd05056 PTKc_FAK Catalytic dom 100.0 4.5E-30 9.8E-35 224.7 14.6 200 97-313 3-205 (270)
290 cd07849 STKc_ERK1_2_like Catal 100.0 3.1E-30 6.8E-35 233.1 13.8 200 99-315 4-208 (336)
291 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.5E-30 7.6E-35 226.2 13.6 186 107-313 2-218 (274)
292 cd08217 STKc_Nek2 Catalytic do 100.0 5.4E-30 1.2E-34 222.8 14.7 197 101-313 1-206 (265)
293 cd05083 PTKc_Chk Catalytic dom 100.0 3.8E-30 8.3E-35 223.1 13.6 190 98-313 4-194 (254)
294 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-30 2.5E-35 227.6 10.3 196 100-315 1-198 (265)
295 KOG0608 Warts/lats-like serine 100.0 1.7E-30 3.7E-35 237.0 11.7 218 95-315 624-869 (1034)
296 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.7E-30 1E-34 224.8 14.2 199 102-313 1-212 (273)
297 cd05110 PTKc_HER4 Catalytic do 100.0 4.2E-30 9.1E-35 228.9 13.8 202 97-315 4-211 (303)
298 cd05606 STKc_beta_ARK Catalyti 100.0 5.7E-30 1.2E-34 225.3 14.4 190 107-315 1-195 (278)
299 cd05633 STKc_GRK3 Catalytic do 100.0 4.9E-30 1.1E-34 225.9 14.0 188 107-313 1-192 (279)
300 cd08225 STKc_Nek5 Catalytic do 100.0 4E-30 8.7E-35 223.0 13.2 197 101-313 1-198 (257)
301 cd06641 STKc_MST3 Catalytic do 100.0 6.8E-30 1.5E-34 224.6 14.8 194 101-314 5-198 (277)
302 cd07835 STKc_CDK1_like Catalyt 100.0 3.9E-30 8.5E-35 226.5 13.2 198 102-315 1-198 (283)
303 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-29 2.2E-34 223.6 15.9 205 97-315 3-219 (280)
304 cd06640 STKc_MST4 Catalytic do 100.0 5.7E-30 1.2E-34 225.0 14.2 195 100-314 4-198 (277)
305 KOG4721 Serine/threonine prote 100.0 2.3E-31 5E-36 240.1 5.2 191 95-315 119-310 (904)
306 cd05112 PTKc_Itk Catalytic dom 100.0 9.3E-30 2E-34 220.8 15.1 195 99-313 3-198 (256)
307 cd07836 STKc_Pho85 Catalytic d 100.0 7.2E-30 1.6E-34 224.9 14.6 198 101-315 1-199 (284)
308 cd07842 STKc_CDK8_like Catalyt 100.0 5.3E-30 1.1E-34 229.2 13.8 203 101-315 1-214 (316)
309 KOG1165 Casein kinase (serine/ 100.0 7.1E-30 1.5E-34 217.5 13.8 204 97-315 25-235 (449)
310 cd06623 PKc_MAPKK_plant_like C 100.0 8.8E-30 1.9E-34 221.6 14.9 197 100-315 1-199 (264)
311 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.6E-30 1.4E-34 224.6 14.2 205 97-315 3-221 (277)
312 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.3E-30 1.6E-34 231.3 14.9 195 98-314 13-213 (343)
313 cd05050 PTKc_Musk Catalytic do 100.0 5.4E-30 1.2E-34 226.4 13.6 202 98-313 3-229 (288)
314 smart00219 TyrKc Tyrosine kina 100.0 5.6E-30 1.2E-34 222.0 13.4 197 102-313 1-201 (258)
315 cd07855 STKc_ERK5 Catalytic do 100.0 3.1E-30 6.7E-35 232.9 12.0 202 100-315 5-210 (334)
316 cd06917 STKc_NAK1_like Catalyt 100.0 5.3E-30 1.1E-34 225.0 13.2 194 101-313 2-198 (277)
317 cd05047 PTKc_Tie Catalytic dom 100.0 7.7E-30 1.7E-34 223.4 14.1 191 107-315 2-211 (270)
318 cd06606 STKc_MAPKKK Catalytic 100.0 1.7E-29 3.6E-34 218.7 16.0 197 101-313 1-199 (260)
319 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-29 2.4E-34 222.0 15.1 192 106-314 14-208 (268)
320 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-29 2.7E-34 220.9 15.2 189 108-315 1-191 (262)
321 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.6E-30 1.9E-34 222.9 14.0 198 107-313 2-204 (268)
322 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-29 2.4E-34 221.1 14.6 196 107-315 2-201 (262)
323 cd06612 STKc_MST1_2 Catalytic 100.0 8.3E-30 1.8E-34 220.9 13.8 194 100-314 3-196 (256)
324 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-30 3.8E-35 228.3 9.6 195 100-314 4-198 (277)
325 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.5E-30 5.5E-35 225.0 10.3 186 107-313 2-201 (258)
326 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.2E-30 1.6E-34 230.8 13.6 199 99-315 4-207 (337)
327 cd07864 STKc_CDK12 Catalytic d 100.0 7E-30 1.5E-34 227.0 13.2 204 96-315 3-216 (302)
328 cd06607 STKc_TAO Catalytic dom 100.0 2E-29 4.3E-34 225.0 16.0 197 100-315 15-212 (307)
329 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-29 2.3E-34 225.3 14.0 195 99-314 18-212 (293)
330 cd06659 STKc_PAK6 Catalytic do 100.0 2.5E-30 5.5E-35 229.8 9.9 194 100-314 21-214 (297)
331 cd05610 STKc_MASTL Catalytic d 100.0 5.1E-29 1.1E-33 243.3 19.9 153 99-254 3-156 (669)
332 cd07857 STKc_MPK1 Catalytic do 100.0 1.6E-29 3.5E-34 228.0 15.2 201 101-315 1-208 (332)
333 cd05581 STKc_PDK1 Catalytic do 100.0 6.9E-30 1.5E-34 224.2 12.4 206 100-313 1-218 (280)
334 KOG1152 Signal transduction se 100.0 7.5E-30 1.6E-34 230.7 12.4 191 99-308 560-760 (772)
335 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-29 2.4E-34 226.5 13.4 211 98-315 6-225 (311)
336 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.9E-29 6.3E-34 221.7 15.9 197 100-315 1-202 (287)
337 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.6E-29 5.6E-34 227.9 15.9 194 99-314 16-215 (345)
338 KOG1035 eIF-2alpha kinase GCN2 100.0 9.9E-31 2.1E-35 253.4 6.2 209 98-312 477-813 (1351)
339 cd07840 STKc_CDK9_like Catalyt 100.0 2.8E-29 6.2E-34 221.1 15.1 197 102-314 1-199 (287)
340 cd07838 STKc_CDK4_6_like Catal 100.0 3.6E-29 7.8E-34 220.5 15.6 196 102-315 1-204 (287)
341 cd05122 PKc_STE Catalytic doma 100.0 3.9E-29 8.4E-34 215.5 15.5 193 101-313 1-193 (253)
342 cd07834 STKc_MAPK Catalytic do 100.0 8.8E-30 1.9E-34 229.4 11.9 200 101-315 1-205 (330)
343 cd06616 PKc_MKK4 Catalytic dom 100.0 6.9E-30 1.5E-34 225.6 10.8 200 100-315 4-209 (288)
344 cd08216 PK_STRAD Pseudokinase 100.0 1.8E-29 3.8E-34 225.8 12.9 195 112-313 12-206 (314)
345 KOG0695 Serine/threonine prote 100.0 9.1E-30 2E-34 217.3 10.3 203 93-313 243-447 (593)
346 cd06635 STKc_TAO1 Catalytic do 100.0 4.4E-29 9.6E-34 223.8 15.3 196 100-314 25-221 (317)
347 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.8E-29 8.1E-34 225.3 14.9 196 98-315 8-204 (328)
348 cd05041 PTKc_Fes_like Catalyti 100.0 2.8E-29 6.1E-34 217.2 13.6 190 106-312 1-190 (251)
349 KOG3653 Transforming growth fa 100.0 1.8E-30 3.8E-35 230.1 6.0 197 96-311 206-418 (534)
350 PRK09188 serine/threonine prot 100.0 9.4E-29 2E-33 222.3 17.2 191 96-301 14-210 (365)
351 cd07852 STKc_MAPK15 Catalytic 100.0 1.8E-29 3.9E-34 228.2 12.3 203 98-314 5-210 (337)
352 cd07831 STKc_MOK Catalytic dom 100.0 5.1E-29 1.1E-33 219.1 14.8 194 102-315 1-197 (282)
353 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-29 4E-34 219.4 11.8 197 108-314 1-198 (265)
354 cd05611 STKc_Rim15_like Cataly 100.0 5E-29 1.1E-33 216.8 14.4 187 106-314 2-190 (260)
355 cd08530 STKc_CNK2-like Catalyt 100.0 3.5E-29 7.6E-34 216.9 13.3 196 101-314 1-198 (256)
356 KOG1026 Nerve growth factor re 100.0 6.4E-30 1.4E-34 241.2 9.0 202 96-311 482-699 (774)
357 KOG0696 Serine/threonine prote 100.0 7.2E-31 1.6E-35 229.2 2.4 204 94-315 343-548 (683)
358 cd05583 STKc_MSK_N N-terminal 100.0 6E-29 1.3E-33 219.7 14.7 201 101-315 1-207 (288)
359 cd06657 STKc_PAK4 Catalytic do 100.0 4E-29 8.7E-34 221.5 13.2 193 101-314 21-213 (292)
360 KOG1094 Discoidin domain recep 100.0 2.4E-29 5.1E-34 227.8 11.7 200 96-311 534-733 (807)
361 cd06648 STKc_PAK_II Catalytic 100.0 1.3E-28 2.8E-33 217.5 16.0 194 100-314 19-212 (285)
362 KOG2052 Activin A type IB rece 100.0 1.2E-29 2.6E-34 223.3 9.2 197 99-312 210-421 (513)
363 cd06618 PKc_MKK7 Catalytic dom 100.0 6.9E-29 1.5E-33 220.3 13.8 204 96-315 11-217 (296)
364 cd05044 PTKc_c-ros Catalytic d 100.0 2.1E-29 4.5E-34 220.2 10.1 195 107-315 2-213 (269)
365 KOG0666 Cyclin C-dependent kin 100.0 1.8E-30 3.8E-35 219.4 2.9 207 98-316 22-239 (438)
366 cd07851 STKc_p38 Catalytic dom 100.0 3.3E-29 7.1E-34 227.1 11.4 194 99-314 14-213 (343)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.8E-29 1E-33 225.9 12.4 198 99-314 4-216 (342)
368 cd06633 STKc_TAO3 Catalytic do 100.0 2.7E-28 5.8E-33 218.4 16.7 195 101-314 22-217 (313)
369 PTZ00024 cyclin-dependent prot 100.0 8.4E-29 1.8E-33 223.6 13.3 208 100-315 8-232 (335)
370 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-28 2.3E-33 217.9 13.5 197 98-314 17-213 (286)
371 PHA03390 pk1 serine/threonine- 100.0 1.2E-28 2.6E-33 215.7 13.4 187 100-315 14-205 (267)
372 cd07830 STKc_MAK_like Catalyti 100.0 8.5E-29 1.8E-33 217.9 12.3 196 102-315 1-197 (283)
373 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-28 2.5E-33 223.5 13.4 193 99-314 14-212 (342)
374 cd08528 STKc_Nek10 Catalytic d 100.0 1.9E-28 4.2E-33 214.2 13.0 198 101-314 1-210 (269)
375 cd06634 STKc_TAO2 Catalytic do 100.0 2.3E-28 5.1E-33 218.2 13.6 196 100-314 15-211 (308)
376 cd05118 STKc_CMGC Catalytic do 100.0 1.8E-28 3.9E-33 215.7 11.4 196 102-314 1-196 (283)
377 cd05123 STKc_AGC Catalytic dom 100.0 3.9E-28 8.5E-33 209.6 13.2 188 108-313 1-189 (250)
378 KOG0584 Serine/threonine prote 100.0 3E-29 6.6E-34 229.3 6.0 195 100-315 40-242 (632)
379 KOG1095 Protein tyrosine kinas 100.0 2.6E-28 5.7E-33 237.9 12.6 202 96-312 688-899 (1025)
380 cd05576 STKc_RPK118_like Catal 100.0 2.8E-28 6.1E-33 209.5 10.9 177 111-315 4-180 (237)
381 KOG0669 Cyclin T-dependent kin 100.0 7E-31 1.5E-35 216.0 -5.2 210 94-316 11-228 (376)
382 KOG0664 Nemo-like MAPK-related 100.0 7.6E-30 1.7E-34 212.2 0.7 195 101-312 54-253 (449)
383 cd07829 STKc_CDK_like Catalyti 100.0 2.8E-28 6.1E-33 214.3 10.6 196 102-314 1-196 (282)
384 KOG0196 Tyrosine kinase, EPH ( 99.9 4.2E-28 9E-33 226.0 10.8 202 96-311 625-828 (996)
385 cd08222 STKc_Nek11 Catalytic d 99.9 3.3E-28 7.1E-33 211.7 9.3 197 101-314 1-202 (260)
386 PLN03224 probable serine/threo 99.9 2.3E-27 4.9E-32 222.0 14.9 210 95-313 140-428 (507)
387 PLN03225 Serine/threonine-prot 99.9 2.6E-27 5.5E-32 226.4 12.7 203 95-313 127-375 (566)
388 KOG0603 Ribosomal protein S6 k 99.9 2.4E-27 5.2E-32 217.6 8.7 190 98-315 320-511 (612)
389 KOG0199 ACK and related non-re 99.9 1.3E-27 2.9E-32 220.3 7.0 201 99-313 109-311 (1039)
390 KOG0670 U4/U6-associated splic 99.9 2.4E-27 5.3E-32 212.2 8.0 198 94-313 426-631 (752)
391 smart00221 STYKc Protein kinas 99.9 4.1E-26 8.9E-31 193.4 14.1 196 102-314 1-197 (225)
392 KOG0668 Casein kinase II, alph 99.9 7.6E-28 1.7E-32 195.6 3.0 187 98-310 36-226 (338)
393 cd05147 RIO1_euk RIO kinase fa 99.9 2.2E-26 4.7E-31 190.7 11.3 143 105-254 2-169 (190)
394 KOG0576 Mitogen-activated prot 99.9 4.9E-28 1.1E-32 222.2 1.3 199 99-314 14-212 (829)
395 KOG1027 Serine/threonine prote 99.9 1.2E-26 2.6E-31 217.9 9.8 187 106-313 515-710 (903)
396 KOG1345 Serine/threonine kinas 99.9 6.3E-27 1.4E-31 194.6 7.0 197 99-315 23-224 (378)
397 KOG1151 Tousled-like protein k 99.9 9.2E-27 2E-31 205.3 7.6 215 96-317 459-685 (775)
398 KOG4257 Focal adhesion tyrosin 99.9 2E-26 4.3E-31 210.3 9.8 199 95-310 384-585 (974)
399 PLN00113 leucine-rich repeat r 99.9 3.4E-26 7.3E-31 233.5 12.7 182 100-313 690-874 (968)
400 KOG4278 Protein tyrosine kinas 99.9 9.1E-27 2E-31 212.5 6.6 202 93-312 260-461 (1157)
401 cd05145 RIO1_like RIO kinase f 99.9 4.7E-25 1E-29 183.1 13.5 142 105-254 2-169 (190)
402 cd00180 PKc Catalytic domain o 99.9 1.6E-24 3.4E-29 180.9 14.7 186 108-310 1-187 (215)
403 KOG0665 Jun-N-terminal kinase 99.9 5.3E-26 1.1E-30 193.0 3.6 193 98-313 15-213 (369)
404 smart00220 S_TKc Serine/Threon 99.9 8.5E-25 1.8E-29 187.0 11.2 182 112-313 1-182 (244)
405 KOG1025 Epidermal growth facto 99.9 2.1E-25 4.6E-30 209.0 5.3 197 100-312 696-895 (1177)
406 KOG1290 Serine/threonine prote 99.9 3.6E-23 7.7E-28 184.4 18.1 136 96-236 74-222 (590)
407 PRK10359 lipopolysaccharide co 99.9 6.8E-24 1.5E-28 178.3 12.8 144 96-253 27-185 (232)
408 KOG1167 Serine/threonine prote 99.9 1.8E-24 4E-29 189.7 8.2 208 96-316 32-278 (418)
409 PRK10345 hypothetical protein; 99.9 3.8E-23 8.1E-28 173.0 13.9 137 105-252 7-159 (210)
410 KOG0200 Fibroblast/platelet-de 99.9 3.9E-23 8.4E-28 199.5 12.9 206 94-312 290-516 (609)
411 smart00090 RIO RIO-like kinase 99.9 1.5E-22 3.2E-27 173.4 14.1 147 101-254 29-200 (237)
412 PRK12274 serine/threonine prot 99.9 1.6E-21 3.5E-26 160.8 14.6 164 104-284 6-177 (218)
413 cd05144 RIO2_C RIO kinase fami 99.9 1.7E-21 3.7E-26 162.9 12.2 140 102-255 17-178 (198)
414 PRK14879 serine/threonine prot 99.9 2.6E-21 5.7E-26 163.2 13.0 138 106-253 2-145 (211)
415 COG0515 SPS1 Serine/threonine 99.9 1.4E-20 3.1E-25 167.1 14.8 202 102-313 2-207 (384)
416 PRK09605 bifunctional UGMP fam 99.8 7.6E-21 1.6E-25 181.8 13.6 141 100-254 333-479 (535)
417 TIGR03724 arch_bud32 Kae1-asso 99.8 6.9E-21 1.5E-25 159.2 11.4 134 108-254 2-141 (199)
418 cd05119 RIO RIO kinase family, 99.8 1E-19 2.2E-24 150.6 11.4 139 105-254 2-166 (187)
419 KOG1024 Receptor-like protein 99.8 3E-20 6.6E-25 162.0 6.9 210 89-312 273-493 (563)
420 PRK01723 3-deoxy-D-manno-octul 99.8 1.1E-18 2.3E-23 149.7 13.6 136 108-253 39-193 (239)
421 PLN00181 protein SPA1-RELATED; 99.8 1.8E-20 3.9E-25 187.3 2.8 152 157-315 29-213 (793)
422 cd05120 APH_ChoK_like Aminogly 99.8 1.8E-18 3.9E-23 137.2 12.5 134 104-253 2-140 (155)
423 KOG1166 Mitotic checkpoint ser 99.8 1E-18 2.3E-23 171.1 9.0 147 96-251 694-850 (974)
424 KOG0590 Checkpoint kinase and 99.7 8.5E-19 1.8E-23 167.8 5.0 196 103-313 321-521 (601)
425 PF14531 Kinase-like: Kinase-l 99.7 1.3E-17 2.9E-22 144.4 5.5 203 100-317 12-251 (288)
426 TIGR01982 UbiB 2-polyprenylphe 99.7 2.6E-16 5.6E-21 146.2 11.6 141 106-254 123-309 (437)
427 KOG0603 Ribosomal protein S6 k 99.6 1.5E-17 3.2E-22 153.5 -0.6 185 108-315 2-190 (612)
428 PRK04750 ubiB putative ubiquin 99.6 1.2E-16 2.7E-21 150.3 4.8 147 100-255 120-317 (537)
429 cd05146 RIO3_euk RIO kinase fa 99.6 5.3E-15 1.1E-19 121.9 12.1 141 106-254 3-176 (197)
430 cd05151 ChoK Choline Kinase (C 99.6 6.6E-15 1.4E-19 119.6 10.6 130 105-253 3-138 (170)
431 KOG4158 BRPK/PTEN-induced prot 99.6 1E-15 2.2E-20 134.3 4.9 209 96-312 153-452 (598)
432 KOG1240 Protein kinase contain 99.6 1.9E-16 4.2E-21 153.6 0.2 204 101-316 24-238 (1431)
433 KOG0606 Microtubule-associated 99.5 2.9E-15 6.2E-20 145.3 2.4 175 99-316 82-258 (1205)
434 KOG0590 Checkpoint kinase and 99.5 2.9E-15 6.3E-20 143.7 0.9 202 101-313 21-226 (601)
435 COG3642 Mn2+-dependent serine/ 99.5 3.7E-13 7.9E-18 107.7 11.5 135 107-254 3-143 (204)
436 smart00750 KIND kinase non-cat 99.5 2.1E-14 4.5E-19 117.4 4.3 100 185-313 1-100 (176)
437 KOG3087 Serine/threonine prote 99.5 6.1E-13 1.3E-17 106.0 11.6 146 104-252 11-166 (229)
438 KOG0195 Integrin-linked kinase 99.5 3.7E-15 8E-20 124.9 -1.3 197 97-315 187-388 (448)
439 cd05154 ACAD10_11_like Acyl-Co 99.5 7.7E-13 1.7E-17 112.1 12.4 142 106-253 4-208 (223)
440 PRK15123 lipopolysaccharide co 99.4 7.7E-12 1.7E-16 108.6 15.1 136 112-251 34-194 (268)
441 PF01163 RIO1: RIO1 family; I 99.4 5.7E-12 1.2E-16 103.5 11.0 129 115-254 1-158 (188)
442 KOG1243 Protein kinase [Genera 99.3 4.6E-12 9.9E-17 118.5 8.8 163 125-313 36-199 (690)
443 KOG0601 Cyclin-dependent kinas 99.3 2.3E-12 5E-17 119.1 6.3 203 97-313 111-323 (524)
444 COG0478 RIO-like serine/threon 99.2 9.5E-11 2.1E-15 99.3 11.2 140 102-254 93-254 (304)
445 KOG1033 eIF-2alpha kinase PEK/ 99.2 2.4E-12 5.1E-17 117.2 0.9 127 173-311 329-456 (516)
446 KOG0601 Cyclin-dependent kinas 99.2 1E-11 2.3E-16 114.8 4.4 153 97-251 262-416 (524)
447 PF06293 Kdo: Lipopolysacchari 99.2 3.1E-10 6.7E-15 95.3 12.8 108 144-253 55-172 (206)
448 KOG1023 Natriuretic peptide re 99.1 2.7E-11 5.8E-16 111.9 3.9 148 154-310 1-151 (484)
449 PF06176 WaaY: Lipopolysacchar 99.1 3.7E-09 7.9E-14 87.9 14.5 142 96-251 27-183 (229)
450 PRK09902 hypothetical protein; 99.1 3E-09 6.4E-14 88.2 12.9 141 108-251 26-179 (216)
451 COG1718 RIO1 Serine/threonine 99.0 8.4E-09 1.8E-13 86.8 14.4 142 105-256 53-220 (268)
452 COG0661 AarF Predicted unusual 99.0 2.8E-09 6E-14 100.3 10.6 142 106-254 131-317 (517)
453 TIGR02172 Fb_sc_TIGR02172 Fibr 98.9 3.1E-08 6.6E-13 84.3 13.3 139 106-254 7-185 (226)
454 KOG3741 Poly(A) ribonuclease s 98.9 9.7E-09 2.1E-13 94.0 10.4 141 113-256 289-447 (655)
455 KOG1235 Predicted unusual prot 98.8 3.4E-08 7.4E-13 92.7 10.9 142 106-254 167-357 (538)
456 COG2112 Predicted Ser/Thr prot 98.8 5.9E-08 1.3E-12 77.4 9.1 131 101-251 23-155 (201)
457 PF01636 APH: Phosphotransfera 98.7 2.2E-07 4.7E-12 79.1 12.9 141 105-252 2-198 (239)
458 cd05150 APH Aminoglycoside 3'- 98.7 1.8E-07 3.9E-12 80.6 11.6 139 108-254 6-196 (244)
459 KOG0606 Microtubule-associated 98.7 1.5E-09 3.2E-14 106.3 -1.8 213 100-315 804-1033(1205)
460 PLN02876 acyl-CoA dehydrogenas 98.6 1.1E-06 2.4E-11 88.5 14.9 152 105-257 43-263 (822)
461 cd05155 APH_ChoK_like_1 Unchar 98.5 9.4E-07 2E-11 75.7 11.5 143 106-258 3-201 (235)
462 PF10707 YrbL-PhoP_reg: PhoP r 98.5 2.1E-06 4.6E-11 71.2 12.8 131 107-248 8-169 (199)
463 PF13095 FTA2: Kinetochore Sim 98.5 2.6E-06 5.6E-11 70.2 11.4 127 100-249 37-206 (207)
464 KOG1266 Protein kinase [Signal 98.4 1.2E-07 2.6E-12 82.3 3.3 91 154-244 121-220 (458)
465 PF12260 PIP49_C: Protein-kina 98.3 2.5E-06 5.5E-11 70.3 8.7 102 148-253 7-113 (188)
466 cd05157 ETNK_euk Ethanolamine 98.2 1.9E-05 4.2E-10 67.5 12.2 144 105-255 3-205 (235)
467 TIGR02721 ycfN_thiK thiamine k 98.2 1.1E-05 2.4E-10 70.0 10.1 139 108-256 4-180 (256)
468 KOG2268 Serine/threonine prote 98.2 3.6E-06 7.8E-11 73.7 6.7 138 102-253 94-253 (465)
469 PRK10593 hypothetical protein; 98.1 9E-05 2E-09 65.8 14.5 78 103-187 17-100 (297)
470 KOG0576 Mitogen-activated prot 98.1 2E-06 4.4E-11 81.0 3.4 183 102-315 244-428 (829)
471 KOG2270 Serine/threonine prote 98.1 2.7E-05 5.9E-10 69.4 10.1 145 104-257 148-319 (520)
472 PRK05231 homoserine kinase; Pr 98.1 8.6E-05 1.9E-09 66.6 13.3 140 105-252 27-218 (319)
473 cd05153 HomoserineK_II Homoser 98.0 0.00012 2.6E-09 64.8 13.6 140 105-252 19-206 (296)
474 PRK09550 mtnK methylthioribose 98.0 0.00012 2.7E-09 67.2 13.2 79 105-186 31-117 (401)
475 TIGR00938 thrB_alt homoserine 98.0 0.00029 6.2E-09 62.9 14.9 145 102-253 24-219 (307)
476 cd05156 ChoK_euk Choline Kinas 97.9 8.7E-05 1.9E-09 66.0 10.9 144 106-256 4-218 (302)
477 cd05152 MPH2' Macrolide 2'-Pho 97.8 0.00028 6E-09 62.0 11.8 36 222-257 186-222 (276)
478 COG3173 Predicted aminoglycosi 97.7 0.00052 1.1E-08 61.0 11.4 153 102-258 27-235 (321)
479 PLN02236 choline kinase 97.6 0.00053 1.2E-08 62.2 10.4 144 104-254 40-234 (344)
480 TIGR02906 spore_CotS spore coa 97.6 0.002 4.3E-08 57.4 13.7 30 221-251 187-216 (313)
481 TIGR01767 MTRK 5-methylthiorib 97.5 0.0007 1.5E-08 61.1 9.9 75 107-184 2-84 (370)
482 PLN02421 phosphotransferase, a 97.5 0.0014 3.1E-08 59.1 11.6 150 100-257 15-219 (330)
483 PLN02756 S-methyl-5-thioribose 97.4 0.0025 5.4E-08 58.6 12.0 76 104-184 36-119 (418)
484 PF01633 Choline_kinase: Choli 97.3 0.00072 1.6E-08 56.8 7.2 30 222-251 144-174 (211)
485 KOG2137 Protein kinase [Signal 97.3 0.00022 4.7E-09 68.2 3.8 98 208-311 105-203 (700)
486 TIGR02904 spore_ysxE spore coa 97.3 0.0048 1E-07 55.1 12.1 31 222-252 197-227 (309)
487 PF03881 Fructosamin_kin: Fruc 97.2 0.0048 1E-07 54.4 11.4 75 103-185 20-97 (288)
488 COG5072 ALK1 Serine/threonine 97.2 0.002 4.4E-08 57.7 8.2 73 171-251 297-370 (488)
489 PTZ00384 choline kinase; Provi 97.1 0.0034 7.4E-08 57.7 9.8 81 100-188 51-137 (383)
490 COG2334 Putative homoserine ki 97.1 0.014 3E-07 52.5 12.7 136 108-251 34-228 (331)
491 PRK12396 5-methylribose kinase 97.0 0.0034 7.4E-08 57.4 8.8 77 105-184 34-117 (409)
492 PRK06148 hypothetical protein; 96.9 0.015 3.3E-07 60.2 13.6 140 106-252 31-237 (1013)
493 PRK11768 serine/threonine prot 96.8 0.046 1E-06 49.2 14.5 72 111-187 36-114 (325)
494 PTZ00296 choline kinase; Provi 96.6 0.022 4.7E-07 53.4 11.0 80 100-187 106-193 (442)
495 COG4248 Uncharacterized protei 96.5 0.015 3.4E-07 53.1 8.5 132 105-246 16-161 (637)
496 KOG1236 Predicted unusual prot 96.0 0.02 4.3E-07 52.3 6.6 60 174-236 319-379 (565)
497 KOG1035 eIF-2alpha kinase GCN2 95.9 0.034 7.3E-07 56.9 8.5 153 143-313 225-388 (1351)
498 PRK10271 thiK thiamine kinase; 95.9 0.0068 1.5E-07 49.7 2.8 34 223-257 79-112 (188)
499 COG3001 Uncharacterized protei 95.7 0.08 1.7E-06 44.7 8.4 76 105-188 21-99 (286)
500 PF07387 Seadorna_VP7: Seadorn 95.6 0.033 7.2E-07 46.8 6.0 85 145-248 103-189 (308)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=305.32 Aligned_cols=200 Identities=26% Similarity=0.371 Sum_probs=177.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC-E
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-Y 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 174 (317)
.+...+++.++.||+|..|+||+|.++. +++.+|+|++... ..+...+++.+|+++++.++|||||.+|+.|..++ .
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~-t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKP-TGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcC-CCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 3566788889999999999999999888 8999999999443 35677789999999999999999999999999999 4
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
++++||||++|+|.++++.. +++++.....++.+|++||.|||+ .+||||||||+||||+..|.|||||||.++.+.
T Consensus 153 isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999999999664 789999999999999999999996 999999999999999999999999999998875
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
.. ...+++ ||..||+||+.+.+.- ....|+||+|.+++|++.| .|.
T Consensus 231 nS--~a~tfv----------GT~~YMsPERi~g~~Y-----s~~sDIWSLGLsllE~a~GrfP~ 277 (364)
T KOG0581|consen 231 NS--IANTFV----------GTSAYMSPERISGESY-----SVKSDIWSLGLSLLELAIGRFPY 277 (364)
T ss_pred hh--hccccc----------ccccccChhhhcCCcC-----CcccceecccHHHHHHhhCCCCC
Confidence 54 444444 6678999999987733 3559999999999999999 664
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-44 Score=311.64 Aligned_cols=198 Identities=24% Similarity=0.379 Sum_probs=172.2
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
...+|.+.+.||+|+|++||+|++++ ++..||||.+.+..+..+..+.+..|+.+|+.++|||||.++++++.++++||
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~-~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKK-SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEecc-CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 35789999999999999999999998 77999999999887778888889999999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC------CcEEEeeeccccc
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED------GHIMLSDFDLCFQ 251 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~------~~~kl~DFG~a~~ 251 (317)
|||||.||+|.+|+... +.+++..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.
T Consensus 87 VMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 99999999999999664 689999999999999999999999999999999999999864 4699999999998
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
+... .+..+.+|+ .-||+||.. ......-++|+|++|..++++..|-
T Consensus 165 L~~~-~~a~tlcGS----------plYMAPEV~-----~~~~YdAKADLWSiG~Ilyq~l~g~ 211 (429)
T KOG0595|consen 165 LQPG-SMAETLCGS----------PLYMAPEVI-----MSQQYDAKADLWSIGTILYQCLTGK 211 (429)
T ss_pred CCch-hHHHHhhCC----------ccccCHHHH-----HhccccchhhHHHHHHHHHHHHhCC
Confidence 8733 233344433 346666544 3444456799999999999999993
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-43 Score=302.35 Aligned_cols=202 Identities=32% Similarity=0.539 Sum_probs=179.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
....++|++++.||+|+||+||.++.++ +++.+|+|++++..... ...+....|..||..++||.||+++..|++...
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~d-t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKD-TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK 99 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcc-cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence 4567899999999999999999999886 99999999998875554 577889999999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|||+||+.||.|...|.+ .+.|++..++.++..|+.||.|||++|||||||||+|||+|.+|+++|+|||+|+..-.
T Consensus 100 LylVld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999999955 58899999999999999999999999999999999999999999999999999987655
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
......+.| |+|||+.+++.....-....|-|++|..++||..|+|
T Consensus 178 ~~~~t~tfc---------------GT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~p 223 (357)
T KOG0598|consen 178 DGDATRTFC---------------GTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKP 223 (357)
T ss_pred CCCcccccc---------------CCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCC
Confidence 554444444 4456666666666677899999999999999999976
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-42 Score=299.16 Aligned_cols=201 Identities=26% Similarity=0.369 Sum_probs=170.9
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-----HHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-----KKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
..+.|.+.+.||+|+||.|-+|..++ +++.||||++++..... .....+++|+++|++|+|||||+++++|+..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~-tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKK-TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcc-cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 56789999999999999999998888 99999999998765433 1234568999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeeccc
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED---GHIMLSDFDLC 249 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~---~~~kl~DFG~a 249 (317)
+..||||||++||+|.+.+-. ++.+.+...+.++.|++.||.|||++||+||||||+|||+..+ ..+||+|||+|
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CceEEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 999999999999999999955 5778899999999999999999999999999999999999765 78999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
+... ..++..|.||| .+|.+||.....--+ ..+...|+||+|+.++-...|-
T Consensus 327 K~~g-~~sfm~TlCGT----------psYvAPEVl~~kg~~--~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 327 KVSG-EGSFMKTLCGT----------PSYVAPEVLASKGVE--YYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred hccc-cceehhhhcCC----------ccccChhheecCCee--cccchheeeeccceEEEEeccC
Confidence 9876 44555666654 467888776533222 2247889999999999999993
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=308.83 Aligned_cols=215 Identities=33% Similarity=0.471 Sum_probs=187.6
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhc-CCCCcceEEEEEEecC
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSML-DHPFLPTLYAHLEVSH 173 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 173 (317)
.....+|.+++.||+|+|++|++|+... +++.||||++.+..... ...+-+.+|.++|.+| .||.|++||..|.++.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~-t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKA-TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecC-CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence 5667899999999999999999999988 99999999998775544 5556788899999999 7999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|+|+||+++|+|.++|++. +.|++..++.++.||+.||+|||++|||||||||+|||+|.+++++|+|||.|+.+.
T Consensus 148 sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999999764 889999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
+.............. ....+...|+.+|.++++.........+|+|.++|+++.|..|.|
T Consensus 226 ~~~~~~~~~~~~~~a--~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~P 285 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQA--SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQP 285 (604)
T ss_pred hhhccccCccCcccc--cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCC
Confidence 765443322211111 111355679999999999999999999999999999999999987
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-41 Score=309.65 Aligned_cols=198 Identities=29% Similarity=0.416 Sum_probs=180.1
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.+|+..+.||+|||+.||++++.. +|+.||+|++.+... .....+++.+||+|.+.|+|||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~-tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLD-TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcC-CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 689999999999999999999866 899999999987543 346778899999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
+|+|..++|..++++ .+.++|.+++.+++||+.||.|||+++|+|||||..|||++++.+|||+|||||.++..+...
T Consensus 97 LELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 999999999999975 488999999999999999999999999999999999999999999999999999998877665
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
-.|.| |+|-|+.+++.....-+.-.|+||+||+++-+..|.|
T Consensus 175 k~TlC---------------GTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~P 216 (592)
T KOG0575|consen 175 KKTLC---------------GTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRP 216 (592)
T ss_pred cceec---------------CCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCC
Confidence 55555 5577777777777777889999999999999999977
No 7
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=282.39 Aligned_cols=198 Identities=34% Similarity=0.588 Sum_probs=180.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
..+++|++++.||.|+||+|.+++.+. ++..+|+|++.+...-. ++.+...+|..+|+.+.||+++++++.+.+.+++
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~-~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKH-SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL 119 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEcc-CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence 778999999999999999999999888 79999999998765443 7778899999999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
||||||++||.|..++++ .++|++..++.++.||+.||+|||.++|++|||||+|||+|.+|.+||+|||+|++....
T Consensus 120 ymvmeyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEEEeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 999999999999999966 488999999999999999999999999999999999999999999999999999886542
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.-| -.|+|||..+++.......+..|-|++|..++||.+|-|
T Consensus 198 ---T~T---------------lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~p 239 (355)
T KOG0616|consen 198 ---TWT---------------LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYP 239 (355)
T ss_pred ---EEE---------------ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCC
Confidence 222 247789999899999999999999999999999999954
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=285.51 Aligned_cols=200 Identities=20% Similarity=0.258 Sum_probs=167.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+.|+.+.++|+|+||+||+|++++ +|+.||||.+......+...+-..+||++|++|+|+|+|.++++|.....++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~-TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKD-TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCC-cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 568888999999999999999988 9999999999876666667777899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|||+ -++.+.+.+.+ ..++...+..++.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+.+..+....
T Consensus 81 E~~d-hTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 81 EYCD-HTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred eecc-hHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9994 55555555554 558999999999999999999999999999999999999999999999999999887533322
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
...+ .+.-|.+||-..+.+.. +.-.|+|++||+..|+..|.|+
T Consensus 159 TDYV----------ATRWYRaPELLvGDtqY----G~pVDiWAiGCv~aEl~~G~pL 201 (396)
T KOG0593|consen 159 TDYV----------ATRWYRAPELLVGDTQY----GKPVDIWAIGCVFAELLTGEPL 201 (396)
T ss_pred hhhh----------hhhhccChhhhcccCcC----CCcccchhhhHHHHHHhcCCcC
Confidence 2222 22234556655444433 4567899999999999999986
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-42 Score=289.58 Aligned_cols=206 Identities=21% Similarity=0.286 Sum_probs=179.5
Q ss_pred CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEE-EEE
Q 042913 92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYA-HLE 170 (317)
Q Consensus 92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-~~~ 170 (317)
++.+...+.+|+|+++||+|.||.||++.... +|..||.|.+..+..+.+..+.+..|+.+|++|+|||||++++ .|.
T Consensus 11 ~~~~~~~l~~y~Il~~IG~GsFg~vykv~~~~-~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 11 FSPPQKTLADYQILKKIGRGSFGEVYKVQCLL-DGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred CCCCcccHHHHHHHHHHcCCcchheEEeeecc-CcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh
Confidence 44466777899999999999999999999887 8999999999988888899999999999999999999999998 455
Q ss_pred ecCE-EEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHH--cC--CeeccCCCCcEEEccCCcEEE
Q 042913 171 VSHY-ICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHA--LG--IIYRDLKPENILLREDGHIML 243 (317)
Q Consensus 171 ~~~~-~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~--~~--ivHrDikp~Nill~~~~~~kl 243 (317)
.++. +++|||+|.+|+|...++.. ..+.+++..+|+++.|+|.||.+||. .. |+||||||.||+|+.+|.+||
T Consensus 90 ~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 90 EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 5555 89999999999999998653 45779999999999999999999998 44 999999999999999999999
Q ss_pred eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
+|||+++.+....+...+.+|| .-||+||...++- ..++.|+|++||.+.|+..-
T Consensus 170 GDfGL~r~l~s~~tfA~S~VGT----------PyYMSPE~i~~~~-----Y~~kSDiWslGCllyEMcaL 224 (375)
T KOG0591|consen 170 GDFGLGRFLSSKTTFAHSLVGT----------PYYMSPERIHESG-----YNFKSDIWSLGCLLYEMCAL 224 (375)
T ss_pred ccchhHhHhcchhHHHHhhcCC----------CcccCHHHHhcCC-----CCcchhHHHHHHHHHHHHhc
Confidence 9999999998877776666655 4588888775543 34788999999999998653
No 10
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.2e-40 Score=294.62 Aligned_cols=217 Identities=29% Similarity=0.496 Sum_probs=184.3
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
.+..++|+++++||+|+||.||+|+-+. +|..+|+|++++...- ..+.+.++.|..+|...++++||++|-.|++..+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~-Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKD-TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY 215 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEcc-CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence 5667899999999999999999999888 9999999999876544 4778899999999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+||||||++||++..+|.+ ...+++..++.++.+++.||.-||+.|+|||||||+|+|||..|++||+|||||.-+..
T Consensus 216 LYLiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred eEEEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999999955 58899999999999999999999999999999999999999999999999999954432
Q ss_pred CCCee-------------ecccc--c-----------------ccccccccccCCCCCcccccccccceeccchhhhccC
Q 042913 255 VPTLV-------------ETNVG--S-----------------ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREH 302 (317)
Q Consensus 255 ~~~~~-------------~~~~~--~-----------------~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~ 302 (317)
..... ..... . +.+.++.......|+|.|+.++|...+.....+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 11100 00000 0 0011112224457999999999999999999999999
Q ss_pred CcccccccCCCCC
Q 042913 303 PAQYSVEQPGGVP 315 (317)
Q Consensus 303 ~~~~~~e~~~G~p 315 (317)
+||+++|+.-|-|
T Consensus 374 LG~ImyEmLvGyP 386 (550)
T KOG0605|consen 374 LGCIMYEMLVGYP 386 (550)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999966
No 11
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.9e-39 Score=280.25 Aligned_cols=239 Identities=49% Similarity=0.809 Sum_probs=198.7
Q ss_pred cCCCCCCcchhhHHHhhccCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHH
Q 042913 73 HHHRKSDLHWSAIKAATNLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEA 151 (317)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~ 151 (317)
..+...+..|..+....+ ...+.+..++|++++.||.|.-|+||+|++.. ++..+|+|++.+.... .+...+++.|.
T Consensus 51 kph~~~d~~w~a~~~~~~-~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~-t~~~fAmKVmdK~~l~~rkKl~Ra~tE~ 128 (459)
T KOG0610|consen 51 KPHKGNDVRWEAISSIRN-SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRG-TNCLFAMKVMDKESLASRKKLKRAQTER 128 (459)
T ss_pred CCCCCCchhhhhhccccc-cCCCccCHHHHHHHHHcCCCCceeEEEEEecC-CCceEEEEEecHHHHhhhhHHHHHHHHH
Confidence 344455556777666665 67788999999999999999999999999998 7799999999887655 47778999999
Q ss_pred HHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCC
Q 042913 152 EILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPE 231 (317)
Q Consensus 152 ~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~ 231 (317)
+||+.++||.+++||..|+.+++.|+|||||+||+|..++++++++.|++..++.++..|+.||+|||-.|||+|||||+
T Consensus 129 eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPE 208 (459)
T KOG0610|consen 129 EILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPE 208 (459)
T ss_pred HHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEccCCcEEEeeecccccCCCCCCeeeccc-----------------cc-----cccc-------------------c
Q 042913 232 NILLREDGHIMLSDFDLCFQSDVVPTLVETNV-----------------GS-----ATRR-------------------R 270 (317)
Q Consensus 232 Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~-----------------~~-----~~~~-------------------~ 270 (317)
||||.++|++.|+||.|+.+....+++..... -. ...+ .
T Consensus 209 NILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~ 288 (459)
T KOG0610|consen 209 NILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPT 288 (459)
T ss_pred eeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCC
Confidence 99999999999999999988877666653210 00 0000 0
Q ss_pred cccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 271 RRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 271 ~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....-...|+=||..+++..+..-.-..|-|++|..++|+.=|
T Consensus 289 ~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG 331 (459)
T KOG0610|consen 289 GARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYG 331 (459)
T ss_pred CccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhC
Confidence 0011112466666666666666666888899999999999877
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-40 Score=290.94 Aligned_cols=204 Identities=23% Similarity=0.272 Sum_probs=172.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HY 174 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 174 (317)
.....|+.+++||+|.||.||+|++.. +|+.||+|.++.+...+.......+||.||++|+||||++|.+..... +.
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~-tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLE-TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecc-cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 445789999999999999999999988 999999999998877777788899999999999999999999998765 78
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+||||||| .-+|..++.. +.-.|++.+++.++.||+.||+|||.+||+|||||.+|||||.+|.+||+|||||+.+..
T Consensus 193 iYlVFeYM-dhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEEecc-cchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999999 5678777753 356799999999999999999999999999999999999999999999999999998877
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
......|+. ..+.=|-+||-.-+... .....|+|+.||++.|+..|-|.
T Consensus 271 ~~~~~~T~r---------VvTLWYRpPELLLG~t~----Yg~aVDlWS~GCIl~El~~gkPI 319 (560)
T KOG0600|consen 271 SGSAPYTSR---------VVTLWYRPPELLLGATS----YGTAVDLWSVGCILAELFLGKPI 319 (560)
T ss_pred CCCcccccc---------eEEeeccChHHhcCCcc----cccceeehhhhHHHHHHHcCCCC
Confidence 665433333 33334555555433332 34678999999999999999663
No 13
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=284.75 Aligned_cols=210 Identities=26% Similarity=0.297 Sum_probs=178.2
Q ss_pred CCCCcchhhHHHhhccCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHH
Q 042913 76 RKSDLHWSAIKAATNLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILS 155 (317)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~ 155 (317)
....|++.++..+|++|+...+ ||+|+||.||+|...+ +..||||.+....... ..+|.+|++++.
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~----------ig~Ggfg~VYkG~l~~--~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls 126 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNL----------IGEGGFGTVYKGVLSD--GTVVAVKRLSSNSGQG--EREFLNEVEILS 126 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcc----------eecCCCeEEEEEEECC--CCEEEEEEecCCCCcc--hhHHHHHHHHHh
Confidence 5567899999999999999887 9999999999999886 5899999876543221 455999999999
Q ss_pred hcCCCCcceEEEEEEecC-EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CeeccCCCC
Q 042913 156 MLDHPFLPTLYAHLEVSH-YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG---IIYRDLKPE 231 (317)
Q Consensus 156 ~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivHrDikp~ 231 (317)
+++|||+|+|+|||.+.+ ..+||+||+++|+|.+++.......++|..+.+|+.++++||+|||... ||||||||+
T Consensus 127 ~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKss 206 (361)
T KOG1187|consen 127 RLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSS 206 (361)
T ss_pred cCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHH
Confidence 999999999999999888 5999999999999999997754338899999999999999999999853 999999999
Q ss_pred cEEEccCCcEEEeeecccccCCC-CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913 232 NILLREDGHIMLSDFDLCFQSDV-VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 232 Nill~~~~~~kl~DFG~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 310 (317)
|||+|+++++||+|||+|+.... .... . +.. .++.||++|||...+.. ..+.|+.+-+.+++|+
T Consensus 207 NILLD~~~~aKlsDFGLa~~~~~~~~~~-~----~~~-----~gt~gY~~PEy~~~g~l-----t~KsDVySFGVvllEl 271 (361)
T KOG1187|consen 207 NILLDEDFNAKLSDFGLAKLGPEGDTSV-S----TTV-----MGTFGYLAPEYASTGKL-----TEKSDVYSFGVVLLEL 271 (361)
T ss_pred HeeECCCCCEEccCccCcccCCccccce-e----eec-----CCCCccCChhhhccCCc-----CcccccccchHHHHHH
Confidence 99999999999999999965443 1111 1 100 68889999999976333 3678899999999999
Q ss_pred CCCC
Q 042913 311 PGGV 314 (317)
Q Consensus 311 ~~G~ 314 (317)
..|-
T Consensus 272 itgr 275 (361)
T KOG1187|consen 272 ITGR 275 (361)
T ss_pred HhCC
Confidence 9984
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=276.76 Aligned_cols=201 Identities=25% Similarity=0.382 Sum_probs=167.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC--EEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH--YICF 177 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 177 (317)
.+|..++.||+|+||.||++...+ +|..+|||.+.... ....+.+.+|+.+|..++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~-~g~~~AvK~v~~~~--~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKK-TGELMAVKSVELED--SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecC-CCcceeeeeeeccc--chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 457778889999999999999887 68999999997652 222677999999999999999999999744333 7999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~~ 256 (317)
+|||+++|+|.+++.+..+ .+++..++.+.+||++||+|||++|||||||||+|||++. ++.+||+|||+++......
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999987654 8999999999999999999999999999999999999999 7999999999998876411
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
... .......++..||+||.... .....+..|+|+++|+.+|+.+|.|
T Consensus 173 ~~~-------~~~~~~~Gtp~~maPEvi~~----g~~~~~~sDiWSlGCtVvEM~Tg~~ 220 (313)
T KOG0198|consen 173 TKS-------DSELSVQGTPNYMAPEVIRN----GEVARRESDIWSLGCTVVEMLTGKP 220 (313)
T ss_pred ccc-------cccccccCCccccCchhhcC----CCcCCccchhhhcCCEEEeccCCCC
Confidence 110 11223466778899988865 2122368999999999999999943
No 15
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=286.39 Aligned_cols=205 Identities=27% Similarity=0.413 Sum_probs=172.0
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc---HHHHHHHHHHHHHHHhcC-CCCcceEEEEEEe
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS---AKKLSHVQMEAEILSMLD-HPFLPTLYAHLEV 171 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 171 (317)
....+.|.+++.||+|+||+|++|.... +++.||+|++.+.... ....+.+.+|+.+++.++ ||||+++++++..
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~-t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t 91 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRL-TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT 91 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeecc-CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence 3566899999999999999999998887 7899999988765221 234566778999999999 9999999999999
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeecccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDFDLCF 250 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DFG~a~ 250 (317)
...+|+||||+.||+|.+++.+ .+++.+..++.++.||+.|++|||++||+||||||+|||++.+ +++||+|||++.
T Consensus 92 ~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 92 PTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred CCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999999976 5889999999999999999999999999999999999999999 999999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
..+.......+.+ |+..|++||....... -.+..+|+||+|.+++.+.+| +|-
T Consensus 170 ~~~~~~~~l~t~c----------Gsp~Y~aPEvl~~~~~---Y~g~~aDvWS~GViLy~ml~G~~PF 223 (370)
T KOG0583|consen 170 ISPGEDGLLKTFC----------GSPAYAAPEVLSGKGT---YSGKAADVWSLGVILYVLLCGRLPF 223 (370)
T ss_pred ccCCCCCcccCCC----------CCcccCCHHHhCCCCC---cCCchhhhhhhHHHHHHHHhCCCCC
Confidence 7753333334444 3344666665543322 237899999999999999999 773
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9e-39 Score=264.05 Aligned_cols=200 Identities=23% Similarity=0.277 Sum_probs=168.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.+|...+.||+|.||.||+|++.+ +|+.||||.++.............+||+.|+.++|+||+.++++|...+.+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~-t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTE-TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecC-CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 478888999999999999999988 9999999999877555555567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+ ..+|..++++. ...+....++.++.++++||+|||.+.|+||||||.|+||+.+|.+||+|||+|+.+.......
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 999 78999999765 5778999999999999999999999999999999999999999999999999999887766543
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
...+.+ |+++..-.-||+--|- ...|+|+.+|++.|+..|+|.
T Consensus 159 ~~~V~T---RWYRAPELLfGsr~Yg-----------~~VDmWavGCI~AELllr~P~ 201 (318)
T KOG0659|consen 159 THQVVT---RWYRAPELLFGSRQYG-----------TGVDMWAVGCIFAELLLRVPF 201 (318)
T ss_pred ccceee---eeccChHHhccchhcC-----------CcchhhhHHHHHHHHHccCCC
Confidence 333322 2222222222222222 346899999999999999885
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.9e-39 Score=290.84 Aligned_cols=197 Identities=25% Similarity=0.376 Sum_probs=172.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|.+.+.||+|+||+||+|+-+. +.+.||+|.+.+....++.++.+.+|++|++.++||||+.++++|+...++|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~-t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKY-TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeeccccc-ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 578899999999999999998776 8999999999988878889999999999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+.| +|..++.. .+.++++.+..++.|++.||.|||+++|+|||+||.|||++..|.+|+||||+|+.........
T Consensus 81 e~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 99955 99999965 5789999999999999999999999999999999999999999999999999998765533221
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ...|+.-||+||. -+....+..+|+|++||+++|++.|.|
T Consensus 158 t----------sikGtPlYmAPEl-----v~e~pyd~~sDlWslGcilYE~~~G~P 198 (808)
T KOG0597|consen 158 T----------SIKGTPLYMAPEL-----VEEQPYDHTSDLWSLGCILYELYVGQP 198 (808)
T ss_pred e----------eccCcccccCHHH-----HcCCCccchhhHHHHHHHHHHHhcCCC
Confidence 1 1244455566654 444555688999999999999999977
No 18
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=273.92 Aligned_cols=215 Identities=27% Similarity=0.399 Sum_probs=176.9
Q ss_pred CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH------------HHHHHHHHHHHHHhcCC
Q 042913 92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK------------KLSHVQMEAEILSMLDH 159 (317)
Q Consensus 92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h 159 (317)
..++...+++|++++.||+|.||+|-+|.+.. +++.||||++.+.....+ ..+++++||.||++|+|
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~-~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H 167 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEV-DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH 167 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecC-CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC
Confidence 35567888999999999999999999998887 899999999987533221 24678999999999999
Q ss_pred CCcceEEEEEEe--cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc
Q 042913 160 PFLPTLYAHLEV--SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE 237 (317)
Q Consensus 160 ~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~ 237 (317)
||||+|+++..+ .+.+|||+|||..|.+...-... ..+.+.+++.|+++++.||+|||.+|||||||||+|+||+.
T Consensus 168 ~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~--~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 168 PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK--PELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS 245 (576)
T ss_pred cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc--ccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC
Confidence 999999999875 46799999999988887665332 23899999999999999999999999999999999999999
Q ss_pred CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+|++||+|||.+........ .+.-..-..-.|+..|++||-|..+.. +.-..+..|+|++|.+++=|.-| +|
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~-----~~~d~~L~~tvGTPAF~APE~c~~~~~-~~~~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSD-----EGSDDQLSRTVGTPAFFAPELCSGGNS-FSYSGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred CCcEEeeccceeeecccCCc-----cccHHHHhhcCCCccccchHhhcCCCC-ccccchhhhhhhhhhhHHHhhhccCC
Confidence 99999999999876533211 111111222478899999999988655 55568899999999999887777 55
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=272.07 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=180.4
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
..+..++|++.++||.|..++||+|+... .+..||||+++.+..... ++.+++|+..|..++||||++++..|..+..
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p-~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~ 98 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIP-TNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSE 98 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecc-cCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence 34667899999999999999999999988 789999999988765544 7899999999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|+||.||.+|++.++++..-...+++..+..|++++++||.|||.+|.||||||+.||||+.+|.|||+|||++.-+-.
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999999999887667799999999999999999999999999999999999999999999999998754433
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
...... .+-..-.++.-||+||....+++-| ..++|+|+.|.+.+|++.| +|.
T Consensus 179 ~G~R~~------~rf~tfvgtp~wmAPEvl~q~~~GY---dfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 179 SGDRQV------TRFNTFVGTPCWMAPEVLMQQLHGY---DFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred cCceee------EeeccccCcccccChHHhhhcccCc---cchhhhhhhhHHHHHHhcCCCCc
Confidence 211100 0002336677789998865555544 4889999999999999999 664
No 20
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=282.18 Aligned_cols=205 Identities=24% Similarity=0.390 Sum_probs=175.9
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCce-EEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSAN-FALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..+...++.+.+.||+|+||+||++.++. .. ||+|++..........+.+.+|+.+|.+++|||||+++|++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g---~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWRG---TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeCC---ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34555667777779999999999999985 44 999999877666655889999999999999999999999998887
Q ss_pred -EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeccCCCCcEEEccCC-cEEEeeecccc
Q 042913 174 -YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-IIYRDLKPENILLREDG-HIMLSDFDLCF 250 (317)
Q Consensus 174 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivHrDikp~Nill~~~~-~~kl~DFG~a~ 250 (317)
.+++||||+++|+|.+++.......+++..+..++.||++||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 7999999999999999997744678999999999999999999999999 99999999999999997 99999999997
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...... ...+ ...|+..|||||....+ ......++|++|-+..++|+.+| +|
T Consensus 193 ~~~~~~-~~~~---------~~~GT~~wMAPEv~~~~---~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK-TSMT---------SVAGTYRWMAPEVLRGE---KSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc-cccc---------CCCCCccccChhhhcCC---CCcCCccchhhhHHHHHHHHHHCCCC
Confidence 654432 1111 13677899999988766 34456889999999999999999 66
No 21
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-37 Score=281.27 Aligned_cols=202 Identities=31% Similarity=0.536 Sum_probs=180.6
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcC-CCCcceEEEEEEec
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVS 172 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 172 (317)
..+..++|+++++||+|.||+|+++..+. +++.+|||+++++..- .+..+..+.|.+|+.... ||.+++++..|...
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~-~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKG-TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcC-CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 56788999999999999999999999988 8899999999887543 477788999999998876 99999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
.++|+||||+.||++..+.+ ...|++..++.++..|+.||.|||++||||||||.+|||+|.+|.+||+|||+|+..
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred CeEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999999999666553 367999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
-.......|.| |+|+|+.+++.......+..|-|++|..++||..|.|
T Consensus 519 m~~g~~TsTfC---------------GTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~ 566 (694)
T KOG0694|consen 519 MGQGDRTSTFC---------------GTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGES 566 (694)
T ss_pred CCCCCcccccc---------------CChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCC
Confidence 65555555555 5688888888888899999999999999999999943
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-37 Score=276.45 Aligned_cols=197 Identities=24% Similarity=0.337 Sum_probs=172.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
....|...++||+|+.|.||.|.... +++.||||.+.... ....+-+.+|+.+|+..+|+|||.+++.|...+.+|+
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~-~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKIS-TKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred hhhhhcchhhhccccccceeeeeecc-CCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence 35789999999999999999998877 78899999998763 3344568999999999999999999999998899999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||++||+|.|++.. ..+++.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||||.++.....
T Consensus 348 VMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred EEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999999999965 4489999999999999999999999999999999999999999999999999999887665
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
...+ ..|+.-||+||.. ...+.+.+.|+||||.|.|||.+|.|
T Consensus 425 KR~T----------mVGTPYWMAPEVv-----trk~YG~KVDIWSLGIMaIEMveGEP 467 (550)
T KOG0578|consen 425 KRST----------MVGTPYWMAPEVV-----TRKPYGPKVDIWSLGIMAIEMVEGEP 467 (550)
T ss_pred cccc----------ccCCCCccchhhh-----hhcccCccccchhhhhHHHHHhcCCC
Confidence 3333 3455668888754 44566788999999999999999976
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=281.30 Aligned_cols=201 Identities=23% Similarity=0.333 Sum_probs=170.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecC-E
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSH-Y 174 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~ 174 (317)
...++|.++++||.|.||.||+|+... +++.||||.+++.....++.-. .+|+..|++|+ ||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~-~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKE-TGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecC-CCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 446799999999999999999998887 8999999999888766555433 56999999999 999999999998887 9
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|+||||| ..+|+++++.+ +..|++..++.|+.||++||+|+|.+|+.||||||+|||+.....+||+|||+||....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 88999999988 78999999999999999999999999999999999999999889999999999998766
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
.+..+ ....+.=|.+||..- ...-.....|+|+.||++.|++.--|+
T Consensus 163 kpPYT-----------eYVSTRWYRAPEvLL----rs~~Ys~pvD~wA~GcI~aEl~sLrPL 209 (538)
T KOG0661|consen 163 KPPYT-----------EYVSTRWYRAPEVLL----RSGYYSSPVDMWAVGCIMAELYSLRPL 209 (538)
T ss_pred CCCcc-----------hhhhcccccchHHhh----hccccCCchHHHHHHHHHHHHHHhccc
Confidence 55432 124444566777542 222234567899999999999876554
No 24
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.7e-36 Score=275.29 Aligned_cols=208 Identities=27% Similarity=0.432 Sum_probs=165.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||+|.... +++.||||++.+... .......+.+|+++++.++||||+++++++.+.+.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKD-TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 479999999999999999998887 789999999876532 335567789999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+.+......
T Consensus 80 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 80 MEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999999999865 467899999999999999999999999999999999999999999999999999644221100
Q ss_pred e-------eccccc---------------c--------c-------ccccccccCCCCCcccccccccceeccchhhhcc
Q 042913 259 V-------ETNVGS---------------A--------T-------RRRRRKSCNGFGSAKRRQENVMEFVAEPRREQRE 301 (317)
Q Consensus 259 ~-------~~~~~~---------------~--------~-------~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~ 301 (317)
. ...... . . ......++..|++||.. .........|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Diw 232 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIF-----LQQGYGQECDWW 232 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHH-----ccCCCCCceeeE
Confidence 0 000000 0 0 00012345556666654 333456789999
Q ss_pred CCcccccccCCCCC
Q 042913 302 HPAQYSVEQPGGVP 315 (317)
Q Consensus 302 ~~~~~~~e~~~G~p 315 (317)
++|++++|+..|.|
T Consensus 233 SlGvil~elltG~~ 246 (377)
T cd05629 233 SLGAIMFECLIGWP 246 (377)
T ss_pred ecchhhhhhhcCCC
Confidence 99999999999943
No 25
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.2e-36 Score=275.02 Aligned_cols=207 Identities=22% Similarity=0.383 Sum_probs=165.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||+||+|.... +++.||+|++.+.... ......+.+|+.++..++|+||+++++.+.+...+|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKD-TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 478999999999999999998877 7899999999765332 34556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+........
T Consensus 80 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 80 MEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred EcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999999999965 367999999999999999999999999999999999999999999999999999765432110
Q ss_pred ee--c------------ccc------cc-----cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 259 VE--T------------NVG------SA-----TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~--~------------~~~------~~-----~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.. . ... .. .......++..|++||.. ........+|+|++|++++|+..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~-----~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVF-----MQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHH-----cCCCCCCchhhhhhHHHHHHHHhC
Confidence 00 0 000 00 000112344556666554 333456789999999999999999
Q ss_pred C
Q 042913 314 V 314 (317)
Q Consensus 314 ~ 314 (317)
.
T Consensus 233 ~ 233 (363)
T cd05628 233 Y 233 (363)
T ss_pred C
Confidence 3
No 26
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=279.16 Aligned_cols=194 Identities=26% Similarity=0.337 Sum_probs=168.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-C-----CCcceEEEEEEecC
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-H-----PFLPTLYAHLEVSH 173 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~iv~~~~~~~~~~ 173 (317)
.+|.|.+.||+|.||+|.+|.+.+ +++.||||+++.. .....+...|+.+|..|+ | -|||+++++|...+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~-T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHK-TGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecC-CCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 489999999999999999999888 9999999999764 566778899999999997 3 48999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC--CcEEEeeeccccc
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED--GHIMLSDFDLCFQ 251 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~--~~~kl~DFG~a~~ 251 (317)
++|||+|.+ ..+|+++++.+....++...++.++.||+.||.+||+.+|||+||||+||||... ..|||+|||.|..
T Consensus 262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999999999 8999999999888889999999999999999999999999999999999999753 3799999999865
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
..... |.-.-+-=|+.+|+.-+.......|+||+||++.|+..|.|+
T Consensus 341 ~~q~v------------------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 341 ESQRV------------------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred cCCcc------------------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 43211 111233345556667777788899999999999999999886
No 27
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.9e-36 Score=271.43 Aligned_cols=202 Identities=22% Similarity=0.257 Sum_probs=166.1
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
.....+|++++.||+|+||.||+|.+.. +++.||||++.... .......+.+|+++++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRP-TGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECC-CCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 3445778889999999999999998876 78999999986542 334556789999999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++||||+++++|.+.. ...+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+...
T Consensus 148 ~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 9999999999986543 2467788899999999999999999999999999999999999999999999765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.... ....++..|++||+...............|+|++|++++|+..| .|
T Consensus 222 ~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 222 MDPC----------NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred cccc----------cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 2111 11246678899997755444434445689999999999999998 44
No 28
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.1e-36 Score=273.98 Aligned_cols=206 Identities=27% Similarity=0.398 Sum_probs=163.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.+|++++.||+|+||.||+|++.. +++.||+|++.+.... ......+.+|+++++.++|+||+++++.+..++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVD-TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 479999999999999999999887 7899999999764322 23456788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+......
T Consensus 80 ~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 80 MDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999999999965 366899999999999999999999999999999999999999999999999998644211100
Q ss_pred e----------ec----ccc-------------------cccccccccccCCCCCcccccccccceeccchhhhccCCcc
Q 042913 259 V----------ET----NVG-------------------SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQ 305 (317)
Q Consensus 259 ~----------~~----~~~-------------------~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~ 305 (317)
. .. ... .........++..|++||... .......+|+|++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGv 232 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGV 232 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc-----CCCCCcceeeeeccc
Confidence 0 00 000 000000113455566666543 334457899999999
Q ss_pred cccccCCC
Q 042913 306 YSVEQPGG 313 (317)
Q Consensus 306 ~~~e~~~G 313 (317)
+++|+..|
T Consensus 233 ilyell~G 240 (376)
T cd05598 233 ILYEMLVG 240 (376)
T ss_pred eeeehhhC
Confidence 99999999
No 29
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-38 Score=271.64 Aligned_cols=199 Identities=24% Similarity=0.387 Sum_probs=171.4
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
...+|++.+.||+|.||+|-+|..+. .|+.||||.++++... ++.+-.+++||+||..|+||||+++|++|+..+.+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~-sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHK-SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhcc-CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 34689999999999999999998877 8999999999876544 467788999999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||..+|.|+||+.+. +.+++..++.+++||+.|+.|||.++++|||||.+|||+|.++++||+|||++..+....
T Consensus 130 ivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 999999999999999765 789999999999999999999999999999999999999999999999999986654433
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceecc-chhhhccCCcccccccCCC-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAE-PRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+..++| |+|-|.++++.++... ....|-|+++..++-+--| +|
T Consensus 208 -fLqTFC---------------GSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP 252 (668)
T KOG0611|consen 208 -FLQTFC---------------GSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP 252 (668)
T ss_pred -HHHHhc---------------CCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence 223333 6677777777776543 5566789999888777666 55
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5e-36 Score=273.82 Aligned_cols=207 Identities=26% Similarity=0.444 Sum_probs=165.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||+|.+.. +++.||||++..... .......+.+|+.+++.++|+||+++++.+..++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKD-TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 479999999999999999999887 789999999986532 234556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+......
T Consensus 80 ~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 80 MEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred ECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 999999999999865 356999999999999999999999999999999999999999999999999999765332110
Q ss_pred eeccc--c---------------------ccc-----ccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913 259 VETNV--G---------------------SAT-----RRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 259 ~~~~~--~---------------------~~~-----~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 310 (317)
..... . ... ......++..|++||.. ........+|+|++|++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVF-----LQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHH-----cCCCCCCeeeeecchhHHHHh
Confidence 00000 0 000 00012345556666654 333446789999999999999
Q ss_pred CCCC
Q 042913 311 PGGV 314 (317)
Q Consensus 311 ~~G~ 314 (317)
..|.
T Consensus 233 ~~G~ 236 (364)
T cd05599 233 LVGY 236 (364)
T ss_pred hcCC
Confidence 9993
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-36 Score=270.23 Aligned_cols=198 Identities=28% Similarity=0.480 Sum_probs=168.6
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
.+..++|++.+.||+|+||.||+|.+.. +++.||+|++..... .....+.+.+|+.+++.++||||+++++.+..++.
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 92 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKG-TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR 92 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence 4567899999999999999999999887 789999999976533 22455678899999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|+||||+.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999999999999965 36789999999999999999999999999999999999999999999999999986543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
... ...++..|++||.... .......|+|++|++++|+..|.
T Consensus 171 ~~~-------------~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~elltg~ 212 (329)
T PTZ00263 171 RTF-------------TLCGTPEYLAPEVIQS-----KGHGKAVDWWTMGVLLYEFIAGY 212 (329)
T ss_pred Ccc-------------eecCChhhcCHHHHcC-----CCCCCcceeechHHHHHHHHcCC
Confidence 211 1134455777776543 33457899999999999999993
No 32
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.3e-36 Score=268.63 Aligned_cols=205 Identities=24% Similarity=0.388 Sum_probs=169.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.... +++.||+|++.+.. ........+.+|+.++..++|+||+++++++...+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKH-TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 479999999999999999998877 78999999997642 2234455688899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+........
T Consensus 80 ~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 80 MDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred EeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 9999999999999653 356899999999999999999999999999999999999999999999999999766443221
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ....++.+|++||+.............++|+|++|++++|+..| .|
T Consensus 159 ~~---------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P 207 (331)
T cd05624 159 QS---------SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207 (331)
T ss_pred ee---------ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence 11 11245667888887654322222345678999999999999999 44
No 33
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=263.30 Aligned_cols=205 Identities=20% Similarity=0.179 Sum_probs=166.1
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--c
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--S 172 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 172 (317)
+.-..++|+.+..|++|.||.||+|+++. +++.||+|.++.+......--.-.+||.+|.+++|||||.+-++... -
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~-t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKK-TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCC-cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 44556889999999999999999999988 89999999998664333344456889999999999999999988764 3
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+.+||||||| .-+|..++... .++|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+
T Consensus 150 d~iy~VMe~~-EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 150 DKIYIVMEYV-EHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred ceeeeeHHHH-HhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh
Confidence 5799999999 66888888765 378999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
+....-.. +...+.=|.+||-.-+ -.......|+||.+|++.|+..|-|+
T Consensus 228 gsp~k~~T----------~lVVTLWYRaPELLLG----~~tyst~iDMWSvGCI~aE~l~~kPl 277 (419)
T KOG0663|consen 228 GSPLKPYT----------PLVVTLWYRAPELLLG----AKTYSTAVDMWSVGCIFAELLTQKPL 277 (419)
T ss_pred cCCcccCc----------ceEEEeeecCHHHhcC----CcccCcchhhhhHHHHHHHHHhcCCC
Confidence 76532111 1122333444443311 11224678999999999999999887
No 34
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.8e-36 Score=268.50 Aligned_cols=205 Identities=23% Similarity=0.379 Sum_probs=168.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||++.... +++.||+|++.+... .....+.+.+|+.+++.++|+||+++++++..++.+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKN-TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 479999999999999999998887 789999999976432 334456688899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.+. ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|.........
T Consensus 80 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 80 MDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred EecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 9999999999999653 356899999999999999999999999999999999999999999999999998765432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. .....++..|++||................|+|+++++++|+..| .|
T Consensus 159 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P 207 (331)
T cd05597 159 Q---------SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207 (331)
T ss_pred c---------ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence 1 011235667888887653222222334678999999999999999 45
No 35
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.4e-35 Score=267.68 Aligned_cols=194 Identities=28% Similarity=0.436 Sum_probs=166.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||+|.+.. +++.||+|++.+..... .....+.+|+++++.++||||+++++++...+..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKD-TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 479999999999999999999887 78999999998754332 4556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 80 ~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~--- 154 (333)
T cd05600 80 MEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY--- 154 (333)
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccc---
Confidence 999999999999955 367899999999999999999999999999999999999999999999999999765431
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||..... ......|+|++|++++|+..|.
T Consensus 155 ----------~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~ell~g~ 195 (333)
T cd05600 155 ----------ANSVVGSPDYMAPEVLRGK-----GYDFTVDYWSLGCMLYEFLCGF 195 (333)
T ss_pred ----------cCCcccCccccChhHhcCC-----CCCCccceecchHHHhhhhhCC
Confidence 0112355667777766433 4457799999999999999993
No 36
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.1e-35 Score=266.23 Aligned_cols=205 Identities=23% Similarity=0.400 Sum_probs=170.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|.+.+.||+|+||.||+|.... +++.||+|++..... .......+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKA-TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 479999999999999999998887 789999999987543 234556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|..+......
T Consensus 80 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 80 MEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred ECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 9999999999999654 356899999999999999999999999999999999999999999999999999876543321
Q ss_pred eecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. .....++..|++||........ .......+|+|++|++++|+..| .|
T Consensus 159 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~P 208 (330)
T cd05601 159 N---------SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208 (330)
T ss_pred e---------eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCC
Confidence 1 1112456678888876532222 23345778999999999999999 44
No 37
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-35 Score=273.15 Aligned_cols=206 Identities=28% Similarity=0.417 Sum_probs=164.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|++++.||+|+||+||+|.+.. +++.||+|++.+... .......+.+|+++++.++|+||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVD-THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 68999999999999999999887 889999999976543 3355678899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++|+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+||||+.++.+||+|||+++.+.......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 81 DYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 99999999999865 3568999999999999999999999999999999999999999999999999986542111000
Q ss_pred --e---------------------cccccc--------------cccccccccCCCCCcccccccccceeccchhhhccC
Q 042913 260 --E---------------------TNVGSA--------------TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREH 302 (317)
Q Consensus 260 --~---------------------~~~~~~--------------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~ 302 (317)
. ...+.. .......++..|++||... .......+|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~~DiwS 233 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL-----RKGYTQLCDWWS 233 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc-----CCCCCCccceee
Confidence 0 000000 0001123455566666543 333457899999
Q ss_pred CcccccccCCCC
Q 042913 303 PAQYSVEQPGGV 314 (317)
Q Consensus 303 ~~~~~~e~~~G~ 314 (317)
+|++++|+..|.
T Consensus 234 lG~il~elltG~ 245 (381)
T cd05626 234 VGVILFEMLVGQ 245 (381)
T ss_pred hhhHHHHHHhCC
Confidence 999999999994
No 38
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1e-35 Score=269.11 Aligned_cols=200 Identities=29% Similarity=0.516 Sum_probs=168.8
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..+..++|++.+.||+|+||.||+|.+....+..||+|++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 456778999999999999999999987763457899999976532 2345567889999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|+||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..+
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999999999965 3678999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.... ...++..|++||.... ......+|+|++|++++|+..|.
T Consensus 183 ~~~~-------------~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell~G~ 225 (340)
T PTZ00426 183 TRTY-------------TLCGTPEYIAPEILLN-----VGHGKAADWWTLGIFIYEILVGC 225 (340)
T ss_pred CCcc-------------eecCChhhcCHHHHhC-----CCCCccccccchhhHHHHHhcCC
Confidence 3110 1134556777776643 33457899999999999999993
No 39
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-35 Score=272.30 Aligned_cols=207 Identities=28% Similarity=0.429 Sum_probs=164.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+|++++.||+|+||.||+|.... +++.||+|++.+... .......+.+|+++++.++|+||+++++.+...+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVD-TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECC-CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 68999999999999999999877 789999999976532 2355677899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++|+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|..+.......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 81 DYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 999999999998653 568999999999999999999999999999999999999999999999999986442111000
Q ss_pred --ecc-------------cccc----------------------cccccccccCCCCCcccccccccceeccchhhhccC
Q 042913 260 --ETN-------------VGSA----------------------TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREH 302 (317)
Q Consensus 260 --~~~-------------~~~~----------------------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~ 302 (317)
... .+.. .......++..|++||.. .......++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~~DiwS 233 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL-----LRTGYTQLCDWWS 233 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHh-----cCCCCCCeeeEEe
Confidence 000 0000 000011244455555544 3344567899999
Q ss_pred CcccccccCCCCC
Q 042913 303 PAQYSVEQPGGVP 315 (317)
Q Consensus 303 ~~~~~~e~~~G~p 315 (317)
+|++++|+..|.|
T Consensus 234 lGvil~elltG~~ 246 (382)
T cd05625 234 VGVILYEMLVGQP 246 (382)
T ss_pred chHHHHHHHhCCC
Confidence 9999999999943
No 40
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.8e-35 Score=265.87 Aligned_cols=192 Identities=28% Similarity=0.513 Sum_probs=160.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+.||+|+||.||+|.... +++.||+|++.+... .......+.+|+++++.++||||+++++.+...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKA-TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 359999999999998877 789999999986543 234556788899999999999999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
++|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+.........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~----- 152 (323)
T cd05571 80 GELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATM----- 152 (323)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcc-----
Confidence 999999865 4678999999999999999999999999999999999999999999999999987532221111
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||... ......++|+|++|++++|+..| .|
T Consensus 153 -----~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P 194 (323)
T cd05571 153 -----KTFCGTPEYLAPEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred -----cceecCccccChhhhc-----CCCCCccccCcccchhhhhhhcCCCC
Confidence 1123555677777653 23446789999999999999999 44
No 41
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.2e-35 Score=271.57 Aligned_cols=207 Identities=23% Similarity=0.415 Sum_probs=169.3
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
...+..++|++.+.||+|+||.||++.+.. +++.||+|++.+... .......+.+|+.+++.++||||+++++++..+
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKS-SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD 115 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 345566899999999999999999999887 789999999976432 234455678899999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+.+|+||||+++|+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 999999999999999999854 35899999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...... ......++..|++||.....-. .......+|+|++|++++|+..|.
T Consensus 193 ~~~~~~---------~~~~~~gt~~Y~aPE~~~~~~~-~~~~~~~~DiwSlG~ilyell~G~ 244 (370)
T cd05621 193 DETGMV---------RCDTAVGTPDYISPEVLKSQGG-DGYYGRECDWWSVGVFLFEMLVGD 244 (370)
T ss_pred ccCCce---------ecccCCCCcccCCHHHHhccCC-CCCCCcccCEEeehHHHHHHHhCC
Confidence 432211 0112245566777776542210 011346799999999999999993
No 42
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4e-35 Score=267.51 Aligned_cols=207 Identities=23% Similarity=0.387 Sum_probs=165.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||+|.... +++.||+|++..... .......+.+|+.++..++|+||+++++.+...+.+|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKD-TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 478999999999999999999887 789999999976432 234567788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||+|+.+......
T Consensus 80 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 80 MEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred EeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999999999865 367899999999999999999999999999999999999999999999999999765432110
Q ss_pred ee--cccc------------------c-----ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 259 VE--TNVG------------------S-----ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~--~~~~------------------~-----~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.. .... . ........++..|++||.. ........+|+|++|++++|+..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVF-----MQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHH-----cCCCCCCcceeccccceeeecccC
Confidence 00 0000 0 0000012344455555554 334455789999999999999999
Q ss_pred C
Q 042913 314 V 314 (317)
Q Consensus 314 ~ 314 (317)
.
T Consensus 233 ~ 233 (360)
T cd05627 233 Y 233 (360)
T ss_pred C
Confidence 3
No 43
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=261.66 Aligned_cols=202 Identities=21% Similarity=0.284 Sum_probs=165.1
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecC----
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSH---- 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~---- 173 (317)
...|..+++||+|.||+||+|+... +|+.||+|.++.....+.......+|+.+|+.|+|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~-~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKR-TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEec-CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 4557778889999999999999888 8999999999876443344556788999999999999 999999998877
Q ss_pred --EEEEEEcccCCCChhcccccCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 174 --YICFLIDYCPNGDLHSLLPKQPN--NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 174 --~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
.+++||||+ ..+|..++..... ..++...++.++.||+.||.|||+++|+||||||+||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999977643 46788899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
+.+...... ......+.-|-+||..-+.. ..+-..|+|+++|++.|+..+.|+
T Consensus 168 ra~~ip~~~----------yt~evvTlWYRaPEvLlGs~----~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFSIPMRT----------YTPEVVTLWYRAPEVLLGST----SYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhcCCccc----------ccccEEEeeccCHHHhcCCC----cCCCCcchHhHHHHHHHHHhCCCC
Confidence 865533322 22223344456666543222 345667899999999999999775
No 44
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.7e-35 Score=269.47 Aligned_cols=209 Identities=22% Similarity=0.391 Sum_probs=171.1
Q ss_pred CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913 92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLE 170 (317)
Q Consensus 92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 170 (317)
.....+..++|++.+.||+|+||.||+|.+.. +++.||+|++.+... .......+.+|+.+++.++||||+++++.+.
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS-TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECC-CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 44566777999999999999999999999887 889999999976432 2344456788999999999999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
.+..+|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99999999999999999999854 358899999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
......... .....++..|++||....... ......++|+|++|++++|+..|.
T Consensus 191 ~~~~~~~~~---------~~~~~gt~~y~aPE~l~~~~~-~~~~~~~~DiwSlGvilyell~G~ 244 (371)
T cd05622 191 KMNKEGMVR---------CDTAVGTPDYISPEVLKSQGG-DGYYGRECDWWSVGVFLYEMLVGD 244 (371)
T ss_pred EcCcCCccc---------ccCcccCccccCHHHHhccCC-CccCCCccceeehhHHHHHHHhCC
Confidence 764322110 111245566777776543211 111356899999999999999993
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-37 Score=274.34 Aligned_cols=199 Identities=23% Similarity=0.368 Sum_probs=179.0
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE-EEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY-ICF 177 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~l 177 (317)
.++|.+++++|+|+||.+++++.+. .+..+++|.+.-........+...+|+.++++++|||||.+++.|+.++. +++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~-~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKS-DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhcc-CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 4689999999999999999998777 77899999998877777777788999999999999999999999998887 999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||+||+||+|.+.+.+.++..|+++.++.|+.||+.|+.|||++.|+|||||+.|||++.++.|+|+|||+|+.+.....
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 99999999999999988778899999999999999999999999999999999999999999999999999999887765
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
+..+-+ |+|-|..+++.+.++.....|+|+++|++.|+.+=
T Consensus 162 ~a~tvv---------------GTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~l 202 (426)
T KOG0589|consen 162 LASTVV---------------GTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTL 202 (426)
T ss_pred hhheec---------------CCCcccCHHHhCCCCCCccCcchhhcchHHHHHhc
Confidence 555544 44666677777888888999999999999998753
No 46
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.7e-35 Score=269.44 Aligned_cols=209 Identities=22% Similarity=0.380 Sum_probs=170.7
Q ss_pred CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913 92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLE 170 (317)
Q Consensus 92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 170 (317)
.....+..++|++.+.||+|+||.||+|.... +++.||+|++.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~ 113 (370)
T cd05596 35 ITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKS-SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ 113 (370)
T ss_pred hccCCCCHHHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 44556777899999999999999999998887 7899999999764322 234456788999999999999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
.++.+|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 99999999999999999999854 358899999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
........ ......++..|++||....... ......+.|+|++|++++|+..|.
T Consensus 191 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~DiwSlGvilyelltG~ 244 (370)
T cd05596 191 KMDANGMV---------RCDTAVGTPDYISPEVLKSQGG-DGYYGRECDWWSVGVFLYEMLVGD 244 (370)
T ss_pred eccCCCcc---------cCCCCCCCcCeECHHHhccCCC-CCCCCCceeeeehhHHHHHHHhCC
Confidence 65432211 0011235566777776543211 122457899999999999999993
No 47
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.3e-35 Score=267.88 Aligned_cols=208 Identities=27% Similarity=0.475 Sum_probs=168.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++++.||+|+||.||+|.+.. +++.||+|++....... .....+.+|+++++.++|+||+++++++.+++.+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKD-TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECC-CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 479999999999999999999887 78999999998754333 4556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 80 MEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred EcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 9999999999999654 67999999999999999999999999999999999999999999999999999776543300
Q ss_pred ee-------------------cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VE-------------------TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~-------------------~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. .............++..|++||... ........|+|++|++++|+..| .|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR-----GTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHc-----CCCCCCceeeEecchhhhhhccCCCC
Confidence 00 0000001111223444555555543 33556789999999999999999 44
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-37 Score=251.24 Aligned_cols=203 Identities=26% Similarity=0.342 Sum_probs=174.4
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..+..++|.+++.||+|-||.||+|+.++ ++..||+|++.+..... ....++.+|++|...|+||||+++|++|.+..
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekk-s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKK-SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred cccchhhccccccccCCccccEeEeeecc-CCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 35667899999999999999999999888 88999999998765443 45568899999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+||++||..+|+|...+.......+++...+.++.|++.||.|||..+||||||||+|+|++..+.+||+|||++....
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999999987778889999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ....+. .++..|.+||.. +........|+|+++..-.||.-|.|
T Consensus 176 ~--~kR~tl----------cgt~dyl~pEmv-----~~~~hd~~Vd~w~lgvl~yeflvg~p 220 (281)
T KOG0580|consen 176 S--NKRKTL----------CGTLDYLPPEMV-----EGRGHDKFVDLWSLGVLCYEFLVGLP 220 (281)
T ss_pred C--CCceee----------ecccccCCHhhc-----CCCCccchhhHHHHHHHHHHHHhcCC
Confidence 1 112222 344456666544 44455678899999999999999976
No 49
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.7e-35 Score=264.84 Aligned_cols=205 Identities=24% Similarity=0.368 Sum_probs=168.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.... +++.+|+|++.+... .......+.+|+.++..++|+||+++++.+...+.+|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 479999999999999999999877 788999999975432 234445678899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.+. ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 80 ~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 80 MDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred EeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 9999999999999653 356899999999999999999999999999999999999999999999999999765432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. .....++..|++||+..............+|+|++|++++|+..| .|
T Consensus 159 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P 207 (332)
T cd05623 159 Q---------SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207 (332)
T ss_pred e---------ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence 1 111245667888887653222222345678999999999999999 44
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.5e-36 Score=264.89 Aligned_cols=194 Identities=31% Similarity=0.471 Sum_probs=164.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+.+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRI-SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcC-CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 478999999999999999999887 7899999999764322 24556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~- 156 (291)
T cd05612 80 MEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW- 156 (291)
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcc-
Confidence 999999999999965 36789999999999999999999999999999999999999999999999999976532110
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...++..|++||... ........|+|++|++++|+..|.
T Consensus 157 ------------~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~l~~g~ 195 (291)
T cd05612 157 ------------TLCGTPEYLAPEVIQ-----SKGHNKAVDWWALGILIYEMLVGY 195 (291)
T ss_pred ------------cccCChhhcCHHHHc-----CCCCCchhhHHHHHHHHHHHHhCC
Confidence 113445567777553 334467899999999999999993
No 51
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.7e-35 Score=259.27 Aligned_cols=198 Identities=30% Similarity=0.419 Sum_probs=166.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|++.+.||+|+||.||+|.+.. +++.||+|.+....... .....+.+|+.+++.++|+||+++++.+..++.+++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEec-CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 37889999999999999998877 78999999987654332 33456788999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++|+|.+++.......+++..++.++.||+.||.|||+.+|+||||||+|||++.++.++|+|||++.........
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 158 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV- 158 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee-
Confidence 9999999998876544457899999999999999999999999999999999999999999999999999765322111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||..... ....++|+|++|++++|+..| .|
T Consensus 159 ----------~~~~g~~~y~aPE~~~~~-----~~~~~~DvwslGvil~el~~g~~p 200 (285)
T cd05631 159 ----------RGRVGTVGYMAPEVINNE-----KYTFSPDWWGLGCLIYEMIQGQSP 200 (285)
T ss_pred ----------cCCCCCCCccCHhhhcCC-----CCCcccCchhHHHHHHHHHhCCCC
Confidence 122466778888877532 345678999999999999999 44
No 52
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=282.49 Aligned_cols=202 Identities=23% Similarity=0.351 Sum_probs=180.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+.|.|+..||.|+||+||+|..+. ++...|-|++... ..+.++.+.-||+||..++||+||++++.|..++.+|++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nke-t~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKE-TKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhccc-chhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 568899999999999999998886 7778888988655 6678889999999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|||.||....++-.. +..+.+.++..+++|+|.||.|||+++|||||||..|||++.+|.++|+|||++.+........
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 999999988877554 5779999999999999999999999999999999999999999999999999987665544444
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.+++ |+.-||+||....+.....+..+.+|+|++|+++||+++|-|
T Consensus 188 DsFI----------GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEP 233 (1187)
T KOG0579|consen 188 DSFI----------GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEP 233 (1187)
T ss_pred cccc----------CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCC
Confidence 4555 445699999999999999999999999999999999999966
No 53
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=269.10 Aligned_cols=197 Identities=24% Similarity=0.348 Sum_probs=172.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..|...+.||+|.||.||+|.+.. +++.||+|++..+. .+..++.++.|+.+|..++++||.++|+.+..+..+|++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~-t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNK-TKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeecc-ccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 457777889999999999999988 89999999998764 3466788999999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|||.||++.++++. +..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||++.++.......
T Consensus 91 ey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred HHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 99999999999954 4556888899999999999999999999999999999999999999999999998876655443
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.+++ |+..||+||.+. ......++|+|+||.+.+|+++|.|
T Consensus 169 ~tfv----------GTPfwMAPEVI~-----~~~Y~~KADIWSLGITaiEla~GeP 209 (467)
T KOG0201|consen 169 KTFV----------GTPFWMAPEVIK-----QSGYDTKADIWSLGITAIELAKGEP 209 (467)
T ss_pred cccc----------ccccccchhhhc-----cccccchhhhhhhhHHHHHHhcCCC
Confidence 4444 556789988775 3445688999999999999999966
No 54
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-36 Score=257.32 Aligned_cols=202 Identities=20% Similarity=0.259 Sum_probs=168.9
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-----cC
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-----SH 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 173 (317)
..+|..++.||+|+||.|..+.+.. +|+.||||.+...+...-..++..+|+++|+.++|+||+.+++++.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~-t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKR-TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcC-CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3566668999999999999999888 88999999998777777888999999999999999999999999854 46
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|+|+|+| +.+|..+++. ++.+++..+..++.||++||+|+|+.+|+||||||.|+|++.+..+||+|||+|+..+
T Consensus 100 DvYiV~elM-etDL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHH-hhHHHHHHHc--CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 799999999 8899999965 3669999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
.. ....-..+. ..+.=|-+||-+ ....+.....|+||.||++.||..|-|+
T Consensus 177 ~~-~~~~~mTeY-------VaTRWYRAPEll----l~~~~Yt~aiDiWSvGCI~AEmL~gkpl 227 (359)
T KOG0660|consen 177 KF-FEDGFMTEY-------VATRWYRAPELL----LNSSEYTKAIDIWSVGCILAEMLTGKPL 227 (359)
T ss_pred cc-Ccccchhcc-------eeeeeecCHHHH----hccccccchhhhhhhhHHHHHHHcCCCC
Confidence 54 111111111 223335566655 3344556889999999999999999775
No 55
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.1e-34 Score=261.31 Aligned_cols=192 Identities=28% Similarity=0.530 Sum_probs=160.4
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+.||+|+||.||++.... +++.||+|++.+... .......+.+|+++++.++||||+++++.+...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKA-SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 359999999999998877 789999999986533 234556788999999999999999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~----- 152 (328)
T cd05593 80 GELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM----- 152 (328)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccc-----
Confidence 999988854 4678999999999999999999999999999999999999999999999999987543221111
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||.... .....+.|+|+++++++|+..| .|
T Consensus 153 -----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltG~~P 194 (328)
T cd05593 153 -----KTFCGTPEYLAPEVLED-----NDYGRAVDWWGLGVVMYEMMCGRLP 194 (328)
T ss_pred -----ccccCCcCccChhhhcC-----CCCCccCCccccchHHHHHhhCCCC
Confidence 11235566777776643 2345789999999999999999 44
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-34 Score=259.27 Aligned_cols=192 Identities=28% Similarity=0.520 Sum_probs=159.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+.||+|+||.||++.+.. +++.||+|++.+.... ......+.+|+++++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKA-TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 359999999999998877 7899999999865432 34456778899999999999999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
++|.+++.. ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++.+||+|||+|+..........
T Consensus 80 ~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~--- 154 (325)
T cd05594 80 GELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK--- 154 (325)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc---
Confidence 999998854 3678999999999999999999997 7999999999999999999999999999875432221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||.... .....+.|+|++|++++|+..| .|
T Consensus 155 -------~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tG~~P 195 (325)
T cd05594 155 -------TFCGTPEYLAPEVLED-----NDYGRAVDWWGLGVVMYEMMCGRLP 195 (325)
T ss_pred -------cccCCcccCCHHHHcc-----CCCCCccccccccceeeeeccCCCC
Confidence 1235566788876543 3345789999999999999999 44
No 57
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-35 Score=272.19 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=172.1
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehh-hhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKD-LLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
.+-|++++.||.|+.|.|-+|++.. +|+.+|||++.+. .........+.+||-||+.+.||||+++|++++++.++|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~-TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAE-TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhccc-ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 3678999999999999999999888 9999999999876 4455666788999999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
|+||++||.|++++.+ .+++++.++.+++.||+.|+.|||..+|+||||||+|+|+|..+++||+|||+|.. ..+..
T Consensus 90 vlEyv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsL-e~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASL-EVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeec-ccCCc
Confidence 9999999999999965 58899999999999999999999999999999999999999999999999999853 33444
Q ss_pred eeecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC-CCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
+..|.| |+|-|..+++-.+. =+++.+|+|+=|.++.=+..| ||-
T Consensus 167 lLeTSC---------------GSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF 212 (786)
T KOG0588|consen 167 LLETSC---------------GSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF 212 (786)
T ss_pred cccccC---------------CCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence 556655 34455444444433 347889999999999999999 874
No 58
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=265.52 Aligned_cols=208 Identities=19% Similarity=0.265 Sum_probs=175.8
Q ss_pred CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
....+..++..+...||+|.||+||+|.++. .||||+++.+....+.++.|++|+.++++-+|.||+-+.|++...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG----dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG----DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc----ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 4556777888999999999999999999986 799999999888889999999999999999999999999999877
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
.. .+|..||+|.+|+.+++.. ..+|.....+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++..-
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 76 9999999999999999765 467999999999999999999999999999999999999999999999999998321
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
. .+.. ........+---||+||.+. .-+..+.....|+.+-|++++|+.+| +|.
T Consensus 539 ~----~w~g----~~q~~qp~gsilwmAPEvIR--mqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 T----RWSG----EQQLEQPHGSLLWMAPEVIR--MQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred e----eecc----ccccCCCccchhhhcHHHHh--hcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 1 1100 01111223444589999876 22244567888999999999999999 885
No 59
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=258.02 Aligned_cols=197 Identities=26% Similarity=0.373 Sum_probs=158.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec----
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS---- 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 172 (317)
...-.|.-.+++|.|+||.||+|.... +++.||||.+..+. +.-.+|+++|+.++|||||++.-+|...
T Consensus 21 ~~~i~~~~~~liG~GsFg~Vyq~~~~e-~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d 93 (364)
T KOG0658|consen 21 KVEISYEAVRLIGSGSFGVVYQAKLRE-TEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESD 93 (364)
T ss_pred ceEEEEEeeEEEeecccceEEEEEEcC-CCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCc
Confidence 344578889999999999999999998 68999999986542 2335699999999999999999887532
Q ss_pred -CEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeecc
Q 042913 173 -HYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDFDL 248 (317)
Q Consensus 173 -~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DFG~ 248 (317)
-+..+||||+ ..+|.++++.. .+..++.-.++-+..||++||.|||..||+||||||.|||+|.+ |.+||||||.
T Consensus 94 ~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 94 EVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred hhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCc
Confidence 2456899999 77999888642 35778888999999999999999999999999999999999965 9999999999
Q ss_pred cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
|+.+........-.| .|.+|..-..+|+-+|- -..|+||.||++.|+..|-|+
T Consensus 173 AK~L~~~epniSYic----SRyYRaPELifga~~Yt-----------~~IDiWSaGCV~aELl~g~pl 225 (364)
T KOG0658|consen 173 AKVLVKGEPNISYIC----SRYYRAPELIFGATEYT-----------TSIDIWSAGCVMAELLKGQPL 225 (364)
T ss_pred ceeeccCCCceeEEE----eccccCHHHHcCccccC-----------ceeEEhhhhHHHHHHhcCCcc
Confidence 999877665433222 23333444444444443 578899999999999999875
No 60
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-34 Score=260.72 Aligned_cols=192 Identities=28% Similarity=0.538 Sum_probs=160.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+.||+|+||.||++.... ++..||+|++..... .......+.+|+++++.++||||+++++.+...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 359999999999998877 789999999986533 234556778899999999999999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~----- 152 (323)
T cd05595 80 GELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----- 152 (323)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcc-----
Confidence 999988855 3578999999999999999999999999999999999999999999999999987532221110
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||..... ......|+|++|++++|+..| .|
T Consensus 153 -----~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ell~g~~P 194 (323)
T cd05595 153 -----KTFCGTPEYLAPEVLEDN-----DYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred -----ccccCCcCcCCcccccCC-----CCCchhchhhhHHHHHHHHhCCCC
Confidence 112355677888876433 345778999999999999999 55
No 61
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.7e-34 Score=258.26 Aligned_cols=198 Identities=30% Similarity=0.462 Sum_probs=162.3
Q ss_pred CeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLS--AKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 175 (317)
+|++++.||+|+||.||+++... .+++.||+|++.+.... ....+.+..|+++++.++ |+||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 58999999999999999997642 36789999999764322 234567888999999995 99999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 999999999999999855 356899999999999999999999999999999999999999999999999999765332
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.... .....++..|++||..... .......|+|++|++++|+..|
T Consensus 159 ~~~~---------~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwslG~il~elltg 203 (332)
T cd05614 159 EKER---------TYSFCGTIEYMAPEIIRGK----GGHGKAVDWWSLGILIFELLTG 203 (332)
T ss_pred CCCc---------cccccCCccccCHHHhcCC----CCCCCccccccchhhhhhhhcC
Confidence 2110 0112355678888876421 1235678999999999999999
No 62
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-36 Score=252.89 Aligned_cols=205 Identities=30% Similarity=0.547 Sum_probs=182.6
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
...+..++|..+++||+|.||+|.+|+.+. +++.+|+|+++++..- .+....-..|-++|+..+||.+..+.-.|+.+
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKa-t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKA-TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ 240 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecc-cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC
Confidence 345678999999999999999999999887 8999999999887543 36677788899999999999999998889999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+.+|+||||..||.|.-.+.+ ...|++...+.+...|+.||.|||+++||+||||.+|+|+|++|++||.|||+|+.-
T Consensus 241 drlCFVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred ceEEEEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 999999999999999998855 578999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
-.......++| |+|||..+++.+.....+..|-|-++..++|+.|| +|-
T Consensus 319 I~~g~t~kTFC---------------GTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPF 368 (516)
T KOG0690|consen 319 IKYGDTTKTFC---------------GTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPF 368 (516)
T ss_pred ccccceecccc---------------CChhhcCchhhccccccceeehhhhhHHHHHHHhccCcc
Confidence 43333333333 77999999999999999999999999999999999 874
No 63
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=240.77 Aligned_cols=200 Identities=20% Similarity=0.294 Sum_probs=169.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 175 (317)
...++++++..||.|..|+|+++..+. +|..+|||.+.+.. ..+..+++...+.++...+ .|+||+.+|+|..+..+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs-~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRS-TGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcc-cceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 445788889999999999999999998 89999999998764 4455677777887766654 89999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
++.||.| ...+..++++. .+++++..+-++...++.||.||.+ +||+|||+||+|||+|+.|++||||||++-.+-.
T Consensus 167 ~IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence 9999999 66677777654 5779999999999999999999986 5899999999999999999999999999865433
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.. -..+.+||..||+||+..++. ......|+|+||++.+++|+++|
T Consensus 245 Sk-----------AhtrsAGC~~YMaPERidp~~--~~kYDiRaDVWSlGITlveLaTg 290 (391)
T KOG0983|consen 245 SK-----------AHTRSAGCAAYMAPERIDPPD--KPKYDIRADVWSLGITLVELATG 290 (391)
T ss_pred cc-----------ccccccCCccccCccccCCCC--CCccchhhhhhhhccchhhhhcc
Confidence 22 223458999999999998763 22345899999999999999999
No 64
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-34 Score=257.44 Aligned_cols=196 Identities=26% Similarity=0.457 Sum_probs=162.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCC-CcceEEEEEEecCEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHP-FLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv 178 (317)
+|++++.||+|+||.||+|.... +++.||+|++.+... .....+.+..|++++..+.|+ +|+++++++...+.+|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 58999999999999999999877 788999999986543 234556788899999999765 688899999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 80 MEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 999999999999855 356899999999999999999999999999999999999999999999999998653221111
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
. ....++..|++||.... .......|+|++|++++|+..|.
T Consensus 158 ~----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltG~ 198 (324)
T cd05587 158 T----------RTFCGTPDYIAPEIIAY-----QPYGKSVDWWAFGVLLYEMLAGQ 198 (324)
T ss_pred e----------eeecCCccccChhhhcC-----CCCCcccchhhhHHHHHHHHhCC
Confidence 1 11235566777776643 33457889999999999999993
No 65
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.8e-34 Score=256.94 Aligned_cols=189 Identities=29% Similarity=0.467 Sum_probs=158.6
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||+|+||.||+|.+.. +++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRD-TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 6999999999999877 788999999976432 33455678889999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus 80 L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~------- 150 (312)
T cd05585 80 LFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKT------- 150 (312)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcc-------
Confidence 9999965 4678999999999999999999999999999999999999999999999999987543222111
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....++..|++||.... .....++|+|++|++++|+..|.
T Consensus 151 ---~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~ 190 (312)
T cd05585 151 ---NTFCGTPEYLAPELLLG-----HGYTKAVDWWTLGVLLYEMLTGL 190 (312)
T ss_pred ---ccccCCcccCCHHHHcC-----CCCCCccceechhHHHHHHHhCC
Confidence 11235566788876643 33457799999999999999994
No 66
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.9e-34 Score=255.99 Aligned_cols=193 Identities=32% Similarity=0.492 Sum_probs=159.9
Q ss_pred eeecccCCeEEEEEEEc--CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLR--DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||++... ..+++.||+|++............+.+|+++++.++||||+++++++..++.+|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 56999999999998763 2368899999998765444455667889999999999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--- 156 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--- 156 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee---
Confidence 9999999854 36689999999999999999999999999999999999999999999999999876533221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||.... .....+.|+|++|++++|+..| .|
T Consensus 157 -------~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~tg~~p 197 (318)
T cd05582 157 -------SFCGTVEYMAPEVVNR-----RGHTQSADWWSFGVLMFEMLTGSLP 197 (318)
T ss_pred -------cccCChhhcCHHHHcC-----CCCCCccceeccceEeeeeccCCCC
Confidence 1134456777776543 3335789999999999999999 55
No 67
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.7e-34 Score=257.45 Aligned_cols=195 Identities=28% Similarity=0.482 Sum_probs=159.7
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHH---HhcCCCCcceEEEEEEecCEEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEIL---SMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
|++++.||+|+||.||+|.+.. +++.||||++.+... .....+.+.+|++++ +.++||||+++++++...+.+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKK-TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 7889999999999999998877 789999999986532 224455677777665 45679999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 80 v~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 80 VMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 9999999999988753 4689999999999999999999999999999999999999999999999999875432221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ....++..|++||.... ......+|+|++|++++|+..| .|
T Consensus 157 ~~----------~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 157 RT----------STFCGTPEFLAPEVLTE-----TSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred cc----------cccccCccccCHhHhcC-----CCCCcccchhhHHHHHHHHHhCCCC
Confidence 11 11235566788876643 2345678999999999999999 44
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=260.46 Aligned_cols=198 Identities=28% Similarity=0.405 Sum_probs=171.9
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 175 (317)
....|.+.+.||+|.||.||+|.... +|+.+|+|++.+..... .....+.+|+.+|+.+. |||||++++.|+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~-tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKS-TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecC-CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 34689999999999999999999888 89999999998765433 34678999999999999 99999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc----CCcEEEeeeccccc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE----DGHIMLSDFDLCFQ 251 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~----~~~~kl~DFG~a~~ 251 (317)
++|||++.||.|.+.+... .+++..+..++.||+.+++|||+.||+||||||+|+|+.. ++.+|++|||+|+.
T Consensus 112 ~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 9999999999999999765 3999999999999999999999999999999999999963 24799999999988
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
... .... ....|+|+|..+++..........|+|+++...+.+.+|.|
T Consensus 189 ~~~-~~~~---------------~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~ 236 (382)
T KOG0032|consen 189 IKP-GERL---------------HTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVP 236 (382)
T ss_pred ccC-CceE---------------eeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCC
Confidence 766 2222 22346667777777777778889999999999999999965
No 69
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.3e-34 Score=254.52 Aligned_cols=200 Identities=24% Similarity=0.299 Sum_probs=163.3
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||+|.... +++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKL-TENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECC-CCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 35789999999999999999998877 78999999986542 12233467789999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 81 VFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred EEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 999995 5898888543 34578999999999999999999999999999999999999999999999999975432221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. .....++..|++||..... .......|+|++|++++|+..|.|
T Consensus 159 ~----------~~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~~l~~g~~ 202 (288)
T cd07871 159 T----------YSNEVVTLWYRPPDVLLGS----TEYSTPIDMWGVGCILYEMATGRP 202 (288)
T ss_pred c----------ccCceecccccChHHhcCC----cccCcHHHHHHHHHHHHHHHhCCC
Confidence 1 1112345568888865321 234567999999999999999954
No 70
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.4e-34 Score=256.31 Aligned_cols=197 Identities=26% Similarity=0.461 Sum_probs=162.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 178 (317)
+|.+.+.||+|+||.||+|.+.. +++.||+|++.+.... ......+..|..++..+ +|++|+++++++...+.+|+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 58899999999999999998876 7899999999875432 23445677788888877 488999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+........
T Consensus 80 ~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 80 MEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred EcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 999999999998855 356899999999999999999999999999999999999999999999999999754322111
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. ....++..|++||.... .......|+|++|++++|+..| .|
T Consensus 158 ~----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~P 200 (323)
T cd05616 158 T----------KTFCGTPDYIAPEIIAY-----QPYGKSVDWWAFGVLLYEMLAGQAP 200 (323)
T ss_pred c----------ccCCCChhhcCHHHhcC-----CCCCCccchhchhHHHHHHHhCCCC
Confidence 1 11234556777776543 3345789999999999999999 44
No 71
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.3e-34 Score=255.35 Aligned_cols=198 Identities=22% Similarity=0.269 Sum_probs=161.1
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.++|++.+.||+|+||.||+|.... +++.||+|++..... ......+.+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKV-NGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECC-CCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 4689999999999999999999876 789999999875432 22234567899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+ .++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+........
T Consensus 82 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 82 FEYV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159 (303)
T ss_pred EECC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence 9999 57888877544 356889999999999999999999999999999999999999999999999998754322211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
. ....++..|++||..... ......+|+|++|++++|+..|.
T Consensus 160 ~----------~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~il~~l~~g~ 201 (303)
T cd07869 160 Y----------SNEVVTLWYRPPDVLLGS----TEYSTCLDMWGVGCIFVEMIQGV 201 (303)
T ss_pred C----------CCCcccCCCCChHHHcCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence 0 112345567788765322 12356789999999999999993
No 72
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-34 Score=253.82 Aligned_cols=199 Identities=17% Similarity=0.223 Sum_probs=164.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++|+||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKE-TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECC-CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999877 7899999999765444455667889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||++++.+..+... ...+++..++.++.||+.||.|||+.+|+||||||+||+++.++.+||+|||+|+.........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 99988766655432 3568999999999999999999999999999999999999999999999999998764322110
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....++..|++||+.... ......|+|++|++++|+..|-|
T Consensus 158 ---------~~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslGvil~el~~g~~ 199 (287)
T cd07848 158 ---------YTEYVATRWYRSPELLLGA-----PYGKAVDMWSVGCILGELSDGQP 199 (287)
T ss_pred ---------ccccccccccCCcHHHcCC-----CCCCchhHHhHHHHHHHHHhCCC
Confidence 0112355678888876432 34568999999999999999943
No 73
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.1e-34 Score=257.11 Aligned_cols=192 Identities=27% Similarity=0.486 Sum_probs=159.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++++..... .....+..|+.+++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKK-TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 359999999999999887 78999999998754333 4556788999999988 69999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus 80 ~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~---- 153 (329)
T cd05588 80 GGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT---- 153 (329)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc----
Confidence 9999988854 3679999999999999999999999999999999999999999999999999987532211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||..... ....+.|+|++|++++|+..| .|
T Consensus 154 ------~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~~l~el~~g~~P 195 (329)
T cd05588 154 ------STFCGTPNYIAPEILRGE-----DYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred ------ccccCCccccCHHHHcCC-----CCCCccceechHHHHHHHHHCCCC
Confidence 112345667788776432 334678999999999999999 44
No 74
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.2e-33 Score=264.48 Aligned_cols=194 Identities=19% Similarity=0.239 Sum_probs=153.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC------CCcceEEEEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH------PFLPTLYAHLE 170 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~ 170 (317)
+..++|++++.||+|+||+||+|.+.. +++.||||+++.. .........|+++++.++| .+++++++++.
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~-~~~~vAvK~i~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRK-RKEYCAVKIVRNV---PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcC-CCeEEEEEEEecc---hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 345789999999999999999998877 7889999999643 1223445667777777654 45888888886
Q ss_pred ec-CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCC---------
Q 042913 171 VS-HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDG--------- 239 (317)
Q Consensus 171 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~--------- 239 (317)
.. +.+|+|||++ +++|.+++.+. ..+++..++.++.||+.||.|||. .|||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccc
Confidence 54 5789999998 88999888553 679999999999999999999998 5999999999999998765
Q ss_pred -------cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 240 -------HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 240 -------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
.+||+|||++....... ....++..|++||.... .......|+|++|++++|+..
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~~-------------~~~~gt~~Y~APE~~~~-----~~~~~~~DiwSlGvil~ellt 340 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHSR-------------TAIVSTRHYRSPEVVLG-----LGWMYSTDMWSMGCIIYELYT 340 (467)
T ss_pred ccCCCCceEEECCCCccccCcccc-------------ccccCCccccCcHHhhc-----CCCCcHHHHHHHHHHHHHHHh
Confidence 49999999885432211 11245566777776643 334578999999999999999
Q ss_pred CCC
Q 042913 313 GVP 315 (317)
Q Consensus 313 G~p 315 (317)
|.|
T Consensus 341 G~~ 343 (467)
T PTZ00284 341 GKL 343 (467)
T ss_pred CCC
Confidence 944
No 75
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.8e-34 Score=258.55 Aligned_cols=201 Identities=19% Similarity=0.253 Sum_probs=162.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----CEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----HYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 175 (317)
+|++.+.||+|+||.||+|.+.. ++..||||.+............+.+|+++++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTH-TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECC-CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 58999999999999999999877 789999999875443444556788999999999999999999987533 358
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 80 ~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 6789998854 356899999999999999999999999999999999999999999999999999764322
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.... .......++..|++||...... .......|+|++|++++|+..|-|
T Consensus 157 ~~~~-------~~~~~~~~t~~y~aPE~~~~~~---~~~~~~~DvwSlGvvl~el~tg~~ 206 (338)
T cd07859 157 TPTA-------IFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAEVLTGKP 206 (338)
T ss_pred cCcc-------ccccCCCCCCCcCCHHHHhccc---cccCchhHHHHHHHHHHHHHcCCC
Confidence 1110 1112234667788888764321 223467899999999999999943
No 76
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.7e-34 Score=255.47 Aligned_cols=191 Identities=30% Similarity=0.504 Sum_probs=157.3
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++.+... .....+.+..|.++++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKG-TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 359999999999999876 789999999986543 234456677899998876 79999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..........
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~--- 154 (321)
T cd05591 80 GGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT--- 154 (321)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc---
Confidence 9999998854 36789999999999999999999999999999999999999999999999999875432221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...++..|++||.... .....++|+|++|++++|+..|.
T Consensus 155 -------~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~tg~ 193 (321)
T cd05591 155 -------TFCGTPDYIAPEILQE-----LEYGPSVDWWALGVLMYEMMAGQ 193 (321)
T ss_pred -------ccccCccccCHHHHcC-----CCCCCccceechhHHHHHHhcCC
Confidence 1234556777776542 33456799999999999999993
No 77
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.4e-33 Score=253.67 Aligned_cols=191 Identities=30% Similarity=0.502 Sum_probs=154.5
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHH-HHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAE-ILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||+||+|.+.. +++.||+|++.+.... ......+..|.. +++.++||||+++++.+...+.+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKA-DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 359999999999999877 7899999999765332 233344555555 5678999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~---- 153 (323)
T cd05575 80 GGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT---- 153 (323)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc----
Confidence 9999999865 4678999999999999999999999999999999999999999999999999987532211110
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....++..|++||.... .....+.|+|++|++++|+..|.
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 154 ------STFCGTPEYLAPEVLRK-----QPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred ------ccccCChhhcChhhhcC-----CCCCccccccccchhhhhhhcCC
Confidence 11134556777776543 33457799999999999999993
No 78
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.4e-34 Score=250.28 Aligned_cols=196 Identities=30% Similarity=0.418 Sum_probs=164.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|++.+.||+|+||.||++.+.. +++.||+|++....... .....+.+|+.+++.++|+||+++++.+..++.+++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcC-CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 48899999999999999998876 78999999997643332 33455778999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.......+++..+..++.|++.||.|||+.+|+||||||+||++++++.++|+|||+++........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~- 158 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI- 158 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc-
Confidence 9999999998886554567899999999999999999999999999999999999999999999999998765322210
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....++..|++||.... ......+|+|+++++++|+..|
T Consensus 159 ----------~~~~~~~~y~aPE~~~~-----~~~~~~~Diws~G~~l~el~~g 197 (285)
T cd05605 159 ----------RGRVGTVGYMAPEVVKN-----ERYTFSPDWWGLGCLIYEMIEG 197 (285)
T ss_pred ----------ccccCCCCccCcHHhcC-----CCCCccccchhHHHHHHHHHHC
Confidence 11234567788887642 3345678999999999999999
No 79
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.2e-34 Score=262.45 Aligned_cols=193 Identities=18% Similarity=0.255 Sum_probs=160.7
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
.+...+|++++.||+|+||.||+|.+.. +++.||+|.... ..+.+|+++++.++||||+++++++..+...
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~-~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNK-TCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECC-CCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCee
Confidence 3556789999999999999999999887 889999997532 3467899999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++|+|++ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 159 ~lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 159 CLILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EEEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9999999 67888888543 56899999999999999999999999999999999999999999999999999653221
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
... ......++..|++||.... .....+.|+|++|++++|+..|.
T Consensus 236 ~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~ 280 (391)
T PHA03212 236 NAN---------KYYGWAGTIATNAPELLAR-----DPYGPAVDIWSAGIVLFEMATCH 280 (391)
T ss_pred ccc---------ccccccCccCCCChhhhcC-----CCCCcHHHHHHHHHHHHHHHHCC
Confidence 110 0111245667777776543 34567899999999999999884
No 80
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-34 Score=259.31 Aligned_cols=204 Identities=19% Similarity=0.283 Sum_probs=160.9
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE 170 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 170 (317)
.+..++|++.+.||+|+||.||+|.+. ..+++.||+|++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 355678999999999999999999752 2245789999987542 334456789999999999 8999999999886
Q ss_pred ec-CEEEEEEcccCCCChhcccccCC------------------------------------------------------
Q 042913 171 VS-HYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------ 195 (317)
Q Consensus 171 ~~-~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------ 195 (317)
.. +.+++||||+++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 54 46899999999999998886421
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccccccc
Q 042913 196 ------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRR 269 (317)
Q Consensus 196 ------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~ 269 (317)
...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...........
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~-------- 233 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK-------- 233 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcc--------
Confidence 134778889999999999999999999999999999999999999999999999865433221110
Q ss_pred ccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 270 RRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 270 ~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
....++..|++||..... ....++|+|+++++++|+.. |
T Consensus 234 ~~~~~~~~y~aPE~~~~~-----~~~~~sDiwslG~il~el~~~g 273 (338)
T cd05102 234 GSARLPLKWMAPESIFDK-----VYTTQSDVWSFGVLLWEIFSLG 273 (338)
T ss_pred cCCCCCccccCcHHhhcC-----CCCcccCHHHHHHHHHHHHhCC
Confidence 111233568888876433 23577899999999999874 6
No 81
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-33 Score=254.41 Aligned_cols=192 Identities=29% Similarity=0.460 Sum_probs=158.6
Q ss_pred eeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 106 RHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLS--AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
+.||+|+||.||++.... .+++.||+|++...... ......+.+|+++++.++||||+++++.+..++.+|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 579999999999998642 36789999999765322 23445678899999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
+++++|.+++.. .+.+.+..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--- 156 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV--- 156 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc---
Confidence 999999999865 466889999999999999999999999999999999999999999999999998754322211
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||..... ....+.|+|++|++++|+..|.
T Consensus 157 -------~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~ell~G~ 197 (323)
T cd05584 157 -------THTFCGTIEYMAPEILMRS-----GHGKAVDWWSLGALMYDMLTGA 197 (323)
T ss_pred -------ccccCCCccccChhhccCC-----CCCCcceecccHHHHHHHhcCC
Confidence 1112456678888876432 3357899999999999999993
No 82
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.5e-34 Score=255.64 Aligned_cols=190 Identities=28% Similarity=0.483 Sum_probs=157.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++.+.... ......+.+|+.++..+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKK-TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 359999999999999887 7899999999875432 34556788899988776 79999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~---- 153 (329)
T cd05618 80 GGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---- 153 (329)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc----
Confidence 9999988854 3679999999999999999999999999999999999999999999999999987532221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....++..|++||.... .......|+|+++++++|+..|
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g 192 (329)
T cd05618 154 ------STFCGTPNYIAPEILRG-----EDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred ------ccccCCccccCHHHHcC-----CCCCCccceecccHHHHHHhhC
Confidence 11235566777776643 2335679999999999999999
No 83
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.3e-33 Score=253.51 Aligned_cols=192 Identities=31% Similarity=0.515 Sum_probs=154.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHH-HHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAE-ILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++.+.... ......+..|.. +++.++||||+++++.+...+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKS-DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 359999999999999877 7899999999765332 233344555554 6788999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|...+.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~---- 153 (321)
T cd05603 80 GGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT---- 153 (321)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc----
Confidence 9999988854 4678999999999999999999999999999999999999999999999999987532211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....++..|++||..... ....+.|+|+++++++|+..|.|
T Consensus 154 ------~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~~g~~ 194 (321)
T cd05603 154 ------STFCGTPEYLAPEVLRKE-----PYDRTVDWWCLGAVLYEMLYGLP 194 (321)
T ss_pred ------ccccCCcccCCHHHhcCC-----CCCCcCcccccchhhhhhhcCCC
Confidence 112345667888765432 23467999999999999999943
No 84
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-33 Score=254.43 Aligned_cols=192 Identities=31% Similarity=0.491 Sum_probs=153.9
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHH-HHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEA-EILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++.+..... .....+..|. .+++.++|+||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKA-EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 359999999999999877 78899999997653222 2233444444 45788999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+.+..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus 80 ~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~---- 153 (325)
T cd05602 80 GGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT---- 153 (325)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc----
Confidence 9999999865 4668899999999999999999999999999999999999999999999999997543221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....++..|++||.... .....++|+|+++++++|+..|.|
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~~ 194 (325)
T cd05602 154 ------STFCGTPEYLAPEVLHK-----QPYDRTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred ------ccccCCccccCHHHHcC-----CCCCCccccccccHHHHHHhcCCC
Confidence 11234556777776543 334567899999999999999943
No 85
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.6e-34 Score=254.97 Aligned_cols=192 Identities=30% Similarity=0.527 Sum_probs=156.4
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++...... ....+.+..|..++..+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKG-TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 359999999999999877 7889999999865422 23445566677777654 79999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|+..........
T Consensus 80 gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~--- 154 (316)
T cd05592 80 GGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS--- 154 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc---
Confidence 9999999865 35799999999999999999999999999999999999999999999999999975432221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||..... ......|+|++|++++|+..| .|
T Consensus 155 -------~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~ell~G~~P 195 (316)
T cd05592 155 -------TFCGTPDYIAPEILKGQ-----KYNESVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred -------cccCCccccCHHHHcCC-----CCCCcccchhHHHHHHHHHhCCCC
Confidence 12345667888776432 335678999999999999999 44
No 86
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.1e-33 Score=252.73 Aligned_cols=191 Identities=28% Similarity=0.490 Sum_probs=154.6
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHH-HHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAE-ILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||+||+|.... +++.||+|++.+.... ......+..|.. +++.++||||+++++.+...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKL-DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 359999999999998876 7899999999765322 233345555554 5678999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|..++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~---- 153 (325)
T cd05604 80 GGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT---- 153 (325)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc----
Confidence 9999988854 4678999999999999999999999999999999999999999999999999987532211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....++..|++||.... ......+|+|++|++++|+..|.
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~G~ 193 (325)
T cd05604 154 ------TTFCGTPEYLAPEVIRK-----QPYDNTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred ------ccccCChhhCCHHHHcC-----CCCCCcCccccccceehhhhcCC
Confidence 11234556777776543 23356799999999999999994
No 87
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-33 Score=258.76 Aligned_cols=199 Identities=21% Similarity=0.264 Sum_probs=161.4
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
...+...+|++++.||+|+||.||+|.... ..++.|++|.+... ....+|+++++.++|+||+++++++...
T Consensus 86 ~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~ 158 (392)
T PHA03207 86 PASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK 158 (392)
T ss_pred cchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC
Confidence 334556789999999999999999997643 24678999988643 2346799999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..+|+|||++ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|+.+
T Consensus 159 ~~~~lv~e~~-~~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 159 STVCMVMPKY-KCDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred CEEEEEehhc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999999999 6788888843 467999999999999999999999999999999999999999999999999999766
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...... .......++..|++||.... .....+.|+|++|++++|+..| .|
T Consensus 236 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~~g~~p 286 (392)
T PHA03207 236 DAHPDT--------PQCYGWSGTLETNSPELLAL-----DPYCAKTDIWSAGLVLFEMSVKNVT 286 (392)
T ss_pred Cccccc--------ccccccccccCccCHhHhcC-----CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 543211 01112245566777776543 3345679999999999999887 44
No 88
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=9.3e-34 Score=254.45 Aligned_cols=192 Identities=31% Similarity=0.527 Sum_probs=157.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++.+... .....+.+..|..++..+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKE-SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcC-CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 359999999999999877 789999999976532 234456677888888876 69999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~---- 153 (320)
T cd05590 80 GGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT---- 153 (320)
T ss_pred CchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc----
Confidence 9999998855 3679999999999999999999999999999999999999999999999999987542221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||.... ......+|+|+++++++|+..| .|
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~~P 195 (320)
T cd05590 154 ------STFCGTPDYIAPEILQE-----MLYGPSVDWWAMGVLLYEMLCGHAP 195 (320)
T ss_pred ------cccccCccccCHHHHcC-----CCCCCccchhhhHHHHHHHhhCCCC
Confidence 11234556777776543 2345678999999999999999 44
No 89
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-33 Score=253.97 Aligned_cols=196 Identities=27% Similarity=0.462 Sum_probs=161.3
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 178 (317)
+|++.+.||+|+||.||+|.... +++.||+|++.+.... ....+.+..|..+++.+. |++|+++++++...+.+|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKG-TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 47888999999999999998877 7899999999865332 344566788999998886 57788899999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~Ey~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 80 MEYVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 999999999999855 367999999999999999999999999999999999999999999999999998754322211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||.... .....+.|+|++|++++|+..|.
T Consensus 158 ----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltG~ 198 (323)
T cd05615 158 ----------TRTFCGTPDYIAPEIIAY-----QPYGKSVDWWAYGVLLYEMLAGQ 198 (323)
T ss_pred ----------ccCccCCccccCHHHHcC-----CCCCCccchhhhHHHHHHHHhCC
Confidence 111234566777776543 33457889999999999999993
No 90
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.6e-34 Score=250.83 Aligned_cols=199 Identities=21% Similarity=0.253 Sum_probs=158.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc---CCCCcceEEEEEE-----e
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML---DHPFLPTLYAHLE-----V 171 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~-----~ 171 (317)
++|++.+.||+|+||.||+|.+....++.||+|.+............+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 4799999999999999999988654578899999876543333334456677777665 6999999999875 3
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
...+++||||+ .++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus 81 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccC-CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 45689999999 57999998766556789999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..... ......++..|++||.... .....+.|+|++|++++|+..|.|
T Consensus 160 ~~~~~-----------~~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~~ 207 (290)
T cd07862 160 YSFQM-----------ALTSVVVTLWYRAPEVLLQ-----SSYATPVDLWSVGCIFAEMFRRKP 207 (290)
T ss_pred ccCCc-----------ccccccccccccChHHHhC-----CCCCCccchHHHHHHHHHHHcCCC
Confidence 54321 0111245566888886643 234567899999999999999855
No 91
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=255.63 Aligned_cols=202 Identities=24% Similarity=0.364 Sum_probs=179.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
......|.+.+.||.|.|++|.++.+.. ++..||||++.+..........+.+|+++|+.|+|||||+++.+.+....+
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~-t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHIL-TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecC-CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 3456889999999999999999999888 899999999999888888878899999999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+.+|.+++++.+ .++..+..++.++.|++.|++|||++.|||||||++||||+.+.++||+|||++..++..
T Consensus 131 ylV~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc
Confidence 999999999999999966 477778999999999999999999999999999999999999999999999999877743
Q ss_pred CCeeecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC-CCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
. +..+++ |+|+|..+++.+.. ......|+|+++..++-+-.| ||.
T Consensus 209 ~-~lqt~c---------------gsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF 255 (596)
T KOG0586|consen 209 L-MLQTFC---------------GSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF 255 (596)
T ss_pred c-cccccC---------------CCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence 3 334444 66778777777765 447788999999999999888 773
No 92
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.8e-33 Score=253.40 Aligned_cols=190 Identities=27% Similarity=0.464 Sum_probs=158.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.... +++.||+|++.+.... ....+.+.+|+.++..+ +|+||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKK-NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 359999999999999887 7899999999875433 34566788999999888 59999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~--- 154 (327)
T cd05617 80 GGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS--- 154 (327)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee---
Confidence 9999988854 35799999999999999999999999999999999999999999999999999875322211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...++..|++||.... ......+|+|++|++++|+..|
T Consensus 155 -------~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~ell~g 192 (327)
T cd05617 155 -------TFCGTPNYIAPEILRG-----EEYGFSVDWWALGVLMFEMMAG 192 (327)
T ss_pred -------cccCCcccCCHHHHCC-----CCCCchheeehhHHHHHHHHhC
Confidence 1234556777776543 3345689999999999999999
No 93
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-33 Score=252.52 Aligned_cols=196 Identities=22% Similarity=0.281 Sum_probs=166.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++++.||+|+||.||++.+.. ++..+|+|++.... .......+.+|+++++.++||||+++++++..++.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKP-SGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECC-CCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 456899999999999999999999887 78999999987642 3445577899999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999999999653 5689999999999999999999986 6999999999999999999999999998765321
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.. ....++..|++||..... ....+.|+|++|++++|+..|
T Consensus 158 ~~------------~~~~g~~~y~aPE~~~~~-----~~~~~~DiwslG~il~el~tg 198 (331)
T cd06649 158 MA------------NSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVELAIG 198 (331)
T ss_pred cc------------ccCCCCcCcCCHhHhcCC-----CCCchHhHHHHHHHHHHHHhC
Confidence 10 112355678888876432 345689999999999999998
No 94
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=267.06 Aligned_cols=197 Identities=24% Similarity=0.325 Sum_probs=166.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC------E
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH------Y 174 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~ 174 (317)
-|..-+.||+|+||.||+++++. +|+.||||.++... .....+.+.+|+++|++++|+|||++++.-+... .
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnke-tG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKE-TGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccc-cccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 34556679999999999999888 99999999997754 3455678899999999999999999998865443 4
Q ss_pred EEEEEcccCCCChhcccccC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc--cCC--cEEEeeeccc
Q 042913 175 ICFLIDYCPNGDLHSLLPKQ-PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR--EDG--HIMLSDFDLC 249 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~--~~~--~~kl~DFG~a 249 (317)
..+|||||.||+|..++.+- +...+++..++.++.+++.||.|||++||+||||||.||++. .+| .-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999753 345799999999999999999999999999999999999995 334 5899999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCCC-CC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
|.++.+.. ....||+++|..+++-+ -..-..-.|.||+|++++|.++| +|
T Consensus 172 rel~d~s~----------------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDDNSL----------------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCCCe----------------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 99887662 23346778888877666 35557778999999999999999 66
No 95
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-33 Score=252.35 Aligned_cols=192 Identities=29% Similarity=0.520 Sum_probs=156.6
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++...... ......+..|..++..+ +||||+++++++...+.+|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKG-KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 359999999999999887 7899999999865322 23445667788888754 89999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.........
T Consensus 80 ~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---- 153 (316)
T cd05620 80 GGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA---- 153 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce----
Confidence 9999998855 3678999999999999999999999999999999999999999999999999987532211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||.... .....++|+|++|++++|+..| .|
T Consensus 154 ------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~el~~g~~P 195 (316)
T cd05620 154 ------STFCGTPDYIAPEILQG-----LKYTFSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ------eccCCCcCccCHHHHcC-----CCCCcccchhhhHHHHHHHHhCCCC
Confidence 11234566777776543 3345779999999999999999 44
No 96
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=251.12 Aligned_cols=194 Identities=23% Similarity=0.345 Sum_probs=169.8
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
-|.++++||+|+||.||+|.++. +|..+|||.+..+ ..++++..|+.|+++++.++||++||.+.....+|+|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~E-sG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRE-SGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhc-cCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 36778889999999999998887 8999999998654 456788899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
||..|++.++++.+ ++.+.+..+..+++..++||+|||...-||||||..|||++.+|..||+|||+|-++...-.
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA--- 184 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA--- 184 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH---
Confidence 99999999999765 68899999999999999999999999999999999999999999999999999988754332
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
+|-...|+..||+||.++ -+...-.+|+|+++.+.+|++.|-|
T Consensus 185 -------KRNTVIGTPFWMAPEVI~-----EIGY~~~ADIWSLGITaIEMAEG~P 227 (502)
T KOG0574|consen 185 -------KRNTVIGTPFWMAPEVIE-----EIGYDTKADIWSLGITAIEMAEGRP 227 (502)
T ss_pred -------hhCccccCcccccHHHHH-----HhccchhhhHhhhcchhhhhhcCCC
Confidence 233345677888888654 3445578899999999999999965
No 97
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.2e-33 Score=251.23 Aligned_cols=191 Identities=29% Similarity=0.446 Sum_probs=155.0
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc---CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML---DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
||+|+||+||+|.+.. +++.||+|++.+.... ......+..|..++..+ +||||+++++.+.....+|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKD-TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECC-CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 6999999999998877 7899999999764322 23444556677777665 69999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++..........
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~--- 154 (330)
T cd05586 80 GGELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN--- 154 (330)
T ss_pred CChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc---
Confidence 9999998854 46799999999999999999999999999999999999999999999999999875432221111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||..... .......|+|++|++++|+..| .|
T Consensus 155 -------~~~gt~~y~aPE~~~~~----~~~~~~~DvwslGvil~elltG~~P 196 (330)
T cd05586 155 -------TFCGTTEYLAPEVLLDE----KGYTKHVDFWSLGVLVFEMCCGWSP 196 (330)
T ss_pred -------CccCCccccCHHHHcCC----CCCCCccceeccccEEEEeccCCCC
Confidence 12356678888876421 1235678999999999999999 44
No 98
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3e-33 Score=255.09 Aligned_cols=194 Identities=17% Similarity=0.233 Sum_probs=159.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTV-LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcC-CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 45899999999999999999998876 789999999976544555667788999999999999999999988644
Q ss_pred -CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 173 -HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 173 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
..+|+||||++ ++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus 98 ~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 98 FQDVYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred cceeEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 35799999994 56766663 3478899999999999999999999999999999999999999999999999975
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... .....++..|++||.... .....+.|+|++|++++|+..|
T Consensus 173 ~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~~DiwSlG~il~el~tg 218 (359)
T cd07876 173 ACTNFM-----------MTPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGELVKG 218 (359)
T ss_pred cccCcc-----------CCCCcccCCCCCchhccC-----CCCCcchhhHHHHHHHHHHHhC
Confidence 432211 111234556777776543 2344678999999999999999
No 99
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4e-33 Score=263.12 Aligned_cols=202 Identities=16% Similarity=0.180 Sum_probs=165.3
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
...|.+.+.||+|+||.||+|......+..||+|.+... .......+++|+.+++.++||||+++++++..++.+|+|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 455999999999999999999877633788999987544 334456778899999999999999999999999999999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
|||+++|+|.+++... ....+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999999887542 23568899999999999999999999999999999999999999999999999998764422
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
... ......++.+|++||+... .....+.|+|++|++++|+..| .|
T Consensus 224 ~~~--------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~P 270 (478)
T PTZ00267 224 SLD--------VASSFCGTPYYLAPELWER-----KRYSKKADMWSLGVILYELLTLHRP 270 (478)
T ss_pred ccc--------cccccCCCccccCHhHhCC-----CCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 110 0111235566778876643 2345778999999999999998 44
No 100
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.4e-33 Score=248.83 Aligned_cols=202 Identities=21% Similarity=0.247 Sum_probs=160.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC---------------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD---------------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF 161 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~---------------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 161 (317)
+..++|++.++||+|+||.||+|.+.. ..+..||+|++.... .......+.+|+++++.++|||
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCC
Confidence 456789999999999999999997643 123479999987543 3445567899999999999999
Q ss_pred cceEEEEEEecCEEEEEEcccCCCChhcccccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCe
Q 042913 162 LPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQP-----------------NNRFSLQAVRFFAAEVLVGLEYLHALGII 224 (317)
Q Consensus 162 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~~~~~~~~~i~~qi~~al~~LH~~~iv 224 (317)
|+++++++...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999875421 12467788999999999999999999999
Q ss_pred eccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCc
Q 042913 225 YRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPA 304 (317)
Q Consensus 225 HrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~ 304 (317)
||||||+|||++.++.+||+|||+++.......... .....+...|++||+...+ ....++|+|+++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG 227 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRI--------QGRAVLPIRWMAWECILMG-----KFTTASDVWAFG 227 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEe--------cCcCCCCccccCHHHHhcC-----CCCchhhhHHHH
Confidence 999999999999999999999999976543221110 0111234567888865432 345789999999
Q ss_pred ccccccCC
Q 042913 305 QYSVEQPG 312 (317)
Q Consensus 305 ~~~~e~~~ 312 (317)
++++|+..
T Consensus 228 ~~l~el~~ 235 (304)
T cd05096 228 VTLWEILM 235 (304)
T ss_pred HHHHHHHH
Confidence 99999764
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.3e-33 Score=246.18 Aligned_cols=190 Identities=27% Similarity=0.405 Sum_probs=157.2
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||+|+||+||+|.+.. +++.||+|.+....... ...+.+..|+++++.++|+||+++++++.....+|+||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRA-TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEcc-CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 6999999999998877 78999999997653332 344677889999999999999999999999999999999999999
Q ss_pred hhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 187 LHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 187 L~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
|.+++.. .....+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||+++.+........
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---- 155 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK---- 155 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc----
Confidence 9877643 2245689999999999999999999999999999999999999999999999999976543221111
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...++..|++||..... ....+.|+|+++++++|+..|
T Consensus 156 ------~~~g~~~y~aPE~~~~~-----~~~~~~DvwslG~il~el~~g 193 (280)
T cd05608 156 ------GYAGTPGFMAPELLQGE-----EYDFSVDYFALGVTLYEMIAA 193 (280)
T ss_pred ------ccCCCcCccCHHHhcCC-----CCCccccHHHHHHHHHHHHhC
Confidence 11345567777776533 345789999999999999988
No 102
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=281.23 Aligned_cols=205 Identities=26% Similarity=0.477 Sum_probs=176.4
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
.-++...+|.|++.||+|+||.|.+++.+. +++.||+|++.+-... ......|+.|..+|...+.+=|++++-.|.++
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~-t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKS-TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeec-cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 345677899999999999999999999888 8999999999874433 45667889999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
.++||||||++||+|-.++.+. .++++..++.++..|+.||.-||+.|+|||||||+|||||..|++||+|||.|.+.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999999999999999775 48999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCeeecccccccccccccccCCCCCccccccccccee-----ccchhhhccCCcccccccCCC-CC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-----AEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+.+...... -..|+|.|+++++.+-+ ..++-+|-||+|.+++||..| -|
T Consensus 226 ~~dG~V~s~--------------~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TP 280 (1317)
T KOG0612|consen 226 DADGTVRSS--------------VAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETP 280 (1317)
T ss_pred CCCCcEEec--------------cccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCc
Confidence 765554322 22455666666655533 346888999999999999999 44
No 103
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=243.42 Aligned_cols=202 Identities=21% Similarity=0.289 Sum_probs=168.1
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHH-HhcCCCCcceEEEEEEecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEIL-SMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~~~~~ 175 (317)
+...+++-+..||.|.||+|++..++. +|+.+|||.++.... +....++..|.+.. +.-+.||||++||.+..++..
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~-sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKP-SGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCc-cCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 445666778889999999999998887 899999999987654 44556777788765 445699999999999999999
Q ss_pred EEEEcccCCCChhcccc---cCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 176 CFLIDYCPNGDLHSLLP---KQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
|+.||+| ..+|..+.+ ......+++..+..|....+.||.||.+ ..||||||||+|||++..|.+||||||+|-+
T Consensus 139 WiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999999 777765543 2345678999999999999999999986 5899999999999999999999999999977
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+...- -.....||.-||+||++.++.. ....|.|.||++.+++|.++| .|
T Consensus 218 Lv~Si-----------AkT~daGCrpYmAPERi~p~~~---gyDiRSDvWSLGITL~EvAtG~fP 268 (361)
T KOG1006|consen 218 LVDSI-----------AKTVDAGCRPYMAPERIDPSDK---GYDIRSDVWSLGITLYEVATGNFP 268 (361)
T ss_pred HHHHH-----------HhhhccCCccccChhccCCccC---CcchhhhhhhhcceEeeeecCCCC
Confidence 64322 2234589999999999986655 456899999999999999999 66
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.2e-33 Score=249.98 Aligned_cols=192 Identities=29% Similarity=0.518 Sum_probs=158.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||+||+|.+.. +++.||+|++.+.... ......+.+|+++++.+ +||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKG-TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECC-CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 359999999999999877 7889999999875432 34556778899999888 69999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|..++.. ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~--- 154 (318)
T cd05570 80 GGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS--- 154 (318)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc---
Confidence 9999998855 35799999999999999999999999999999999999999999999999999865322211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||.... ......+|+|++|++++|+..| .|
T Consensus 155 -------~~~g~~~y~aPE~~~~-----~~~~~~~DiwslGvil~~l~~G~~p 195 (318)
T cd05570 155 -------TFCGTPDYIAPEILSY-----QPYGPAVDWWALGVLLYEMLAGQSP 195 (318)
T ss_pred -------ceecCccccCHHHhcC-----CCCCcchhhhhHHHHHHHHhhCCCC
Confidence 1134556777776543 3345789999999999999999 44
No 105
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.4e-33 Score=249.04 Aligned_cols=192 Identities=31% Similarity=0.537 Sum_probs=156.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHh-cCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSM-LDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. +++.||+|++...... .........|..++.. ++||||+++++++...+.+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKG-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 359999999999999887 7899999999875422 2334556678888876 489999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+|+|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..........
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--- 154 (316)
T cd05619 80 GGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC--- 154 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee---
Confidence 9999999865 35689999999999999999999999999999999999999999999999999875322211111
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||.... ......+|+|++|++++|+..| .|
T Consensus 155 -------~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 155 -------TFCGTPDYIAPEILLG-----QKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred -------eecCCccccCHHHHcC-----CCCCchhhhhhHHHHHHHHHhCCCC
Confidence 1235566788876643 2345679999999999999999 44
No 106
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-33 Score=264.53 Aligned_cols=203 Identities=21% Similarity=0.246 Sum_probs=153.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEe--------------ehh-hhcHHHHHHHHHHHHHHHhcCCC
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVV--------------DKD-LLSAKKLSHVQMEAEILSMLDHP 160 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~--------------~~~-~~~~~~~~~~~~E~~~l~~l~h~ 160 (317)
....++|++++.||+|+||+||+|..+...+..+++|.+ .+. .........+.+|+.+|+.++|+
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345689999999999999999999876533333333311 111 11223445688999999999999
Q ss_pred CcceEEEEEEecCEEEEEEcccCCCChhcccccCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc
Q 042913 161 FLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQP---NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE 237 (317)
Q Consensus 161 ~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~ 237 (317)
||+++++++...+..|+|++++ +++|.+++.... ........++.++.||+.||.|||++||+||||||+|||++.
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC 302 (501)
T ss_pred CcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 9999999999999999999999 667777664321 122345677889999999999999999999999999999999
Q ss_pred CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
++.+||+|||+|+.+...... ......++..|++||... ......+.|+|++|++++|+..|
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~---------~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA---------FDYGWVGTVATNSPEILA-----GDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred CCCEEEEeCCCceecCccccc---------ccccccCCcCCCCchhhc-----CCCCCcHHHHHHHHHHHHHHHHC
Confidence 999999999999876543211 011124556677777654 33456789999999999999876
No 107
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.6e-33 Score=250.71 Aligned_cols=198 Identities=24% Similarity=0.305 Sum_probs=166.6
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||+|+||.||++.+.. ++..+|+|++.... .......+.+|+++++.++|+||+++++++..++.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKP-SGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECC-CCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 456899999999999999999998876 78899999887542 3445567899999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.+||+|||++..+...
T Consensus 80 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 80 ICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999999999965 35689999999999999999999985 7999999999999999999999999998765321
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ....++..|++||.... .....+.|+|++|++++|+..| .|
T Consensus 158 ~~------------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~il~~l~~g~~p 201 (333)
T cd06650 158 MA------------NSFVGTRSYMSPERLQG-----THYSVQSDIWSMGLSLVEMAIGRYP 201 (333)
T ss_pred cc------------ccCCCCccccCHHHhcC-----CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 10 01134556788887643 3345779999999999999988 44
No 108
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-32 Score=243.41 Aligned_cols=198 Identities=30% Similarity=0.426 Sum_probs=165.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|++.+.||+|+||+||++.+.. +++.||+|.+....... .....+.+|+++++.++|+||+.+++.+..++..++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRA-TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECC-CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 47888999999999999998887 78999999987653332 33455788999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~- 158 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI- 158 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc-
Confidence 9999999998886554557999999999999999999999999999999999999999999999999998764322110
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||+... .....+.|+|+++++++|+..| .|
T Consensus 159 ----------~~~~g~~~~~aPE~~~~-----~~~~~~~Di~slG~~l~~l~~g~~P 200 (285)
T cd05632 159 ----------RGRVGTVGYMAPEVLNN-----QRYTLSPDYWGLGCLIYEMIEGQSP 200 (285)
T ss_pred ----------cCCCCCcCccChHHhcC-----CCCCcccchHHHHHHHHHHHhCCCC
Confidence 11245667888887643 2345678999999999999999 44
No 109
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.8e-33 Score=243.11 Aligned_cols=197 Identities=27% Similarity=0.440 Sum_probs=164.7
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|++++.||+|+||.||++.... +++.||+|++..............+|+.+++.++|+||+++++++......++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKK-NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETT-TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECC-CCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 8899999999999999999888 788999999988765555555556799999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
+++++|.+++.. ...+++..++.++.||+.||.+||+.+|+|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~--- 154 (260)
T PF00069_consen 80 CPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN--- 154 (260)
T ss_dssp ETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE---
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence 988899999973 467899999999999999999999999999999999999999999999999999764111111
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.....+...|.+||... .......+.|+|+++++++|+..| .|
T Consensus 155 -------~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~il~~l~~~~~p 198 (260)
T PF00069_consen 155 -------FNPFVGTPEYMAPEVLQ----QGKKYTRKSDIWSLGIILYELLTGKLP 198 (260)
T ss_dssp -------BSSSSSSGGGSCHHHHT----TTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred -------ccccccccccccccccc----ccccccccccccccccccccccccccc
Confidence 11112333455555433 256678999999999999999988 44
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.7e-33 Score=255.66 Aligned_cols=198 Identities=20% Similarity=0.259 Sum_probs=161.3
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC-----EE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-----YI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 175 (317)
+|++.+.||+|+||.||++.+.. +++.||+|.+...........++.+|+++++.++|+||+++++++.... ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPR-DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECC-CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 47888999999999999998876 7899999998765434455667889999999999999999999998766 78
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+ .++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.....
T Consensus 80 ~lv~e~~-~~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELM-QSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeecc-ccCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999999 5788887744 467899999999999999999999999999999999999999999999999999765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
... ......++..|++||...... ....+.|+|++|++++|+..|-+
T Consensus 157 ~~~---------~~~~~~~~~~y~aPE~~~~~~----~~~~~~DiwslG~il~el~~g~~ 203 (372)
T cd07853 157 ESK---------HMTQEVVTQYYRAPEILMGSR----HYTSAVDIWSVGCIFAELLGRRI 203 (372)
T ss_pred ccc---------cCCCCCcCCCcCCHHHHcCCC----CCCcHHHHHhHHHHHHHHHcCCC
Confidence 211 011123455688888664321 12467899999999999999943
No 111
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.5e-33 Score=243.54 Aligned_cols=191 Identities=27% Similarity=0.437 Sum_probs=158.6
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||+|+||.||++.... +++.||+|.+....... .....+..|+++++.++||||+++++.+..+..+|+||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKN-TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEcc-CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 6999999999998887 78999999997643332 223445679999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~-------- 151 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI-------- 151 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee--------
Confidence 998886655556899999999999999999999999999999999999999999999999998765432211
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||+.... ....+.|+|+++++++|+..| .|
T Consensus 152 ---~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslGv~l~el~~g~~p 193 (277)
T cd05607 152 ---TQRAGTNGYMAPEILKEE-----PYSYPVDWFAMGCSIYEMVAGRTP 193 (277)
T ss_pred ---eccCCCCCccCHHHHccC-----CCCCchhHHHHHHHHHHHHhCCCC
Confidence 112455678888876433 245788999999999999998 45
No 112
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.5e-33 Score=270.35 Aligned_cols=208 Identities=22% Similarity=0.268 Sum_probs=165.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++...... ....+++.+|+++++.++||||+++++++..++..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~-tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPV-CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECC-CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 689999999999999999999877 7899999999754322 34456789999999999999999999999999999999
Q ss_pred EcccCCCChhcccccC---------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 179 IDYCPNGDLHSLLPKQ---------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~---------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
|||++|++|.+++... ....++...++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999988532 1233566778899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeec-ccc-------cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 250 FQSDVVPTLVET-NVG-------SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 250 ~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
+........... ... .........++..|++||+... .....+.|+|++|++++|+..|
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-----~~~S~kSDIWSLGVILyELLTG 227 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-----VPASESTDIYALGVILYQMLTL 227 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-----CCCCcHhHHHHHHHHHHHHHHC
Confidence 876322111000 000 0011112346667777776543 3446789999999999999999
No 113
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.4e-33 Score=241.70 Aligned_cols=203 Identities=20% Similarity=0.221 Sum_probs=162.4
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
+..++|++.+.||+|+||.||+|.+.. ..+..||+|.++... .......+.+|+.+++.++||||+++++++..++.
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT 80 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence 455789999999999999999997652 245689999987643 33445678899999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.++||||+++++|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++.++|+|||.+.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999999998654 35689999999999999999999999999999999999999999999999998755322
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC-CC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP-GG-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~G-~p 315 (317)
.... . .....+...|++||... ......+.|+|+++++++|+. .| .|
T Consensus 160 ~~~~-~--------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~ell~~g~~p 208 (266)
T cd05064 160 EAIY-T--------TMSGKSPVLWAAPEAIQ-----YHHFSSASDVWSFGIVMWEVMSYGERP 208 (266)
T ss_pred cchh-c--------ccCCCCceeecCHHHHh-----hCCccchhHHHHHHHHHHHHhcCCCCC
Confidence 1110 0 00111223577777653 334567899999999999954 47 44
No 114
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.7e-33 Score=262.59 Aligned_cols=205 Identities=21% Similarity=0.247 Sum_probs=167.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC---
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH--- 173 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 173 (317)
...++|++.+.||+|+||.||+|.+.. +++.||||++............+.+|+.++..++|+||+++++.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVS-DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcC-CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999998876 7899999999876666677778899999999999999999987764322
Q ss_pred -----EEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 174 -----YICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 174 -----~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
.+++||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+|+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 478999999999999988643 2356899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
|+++.+....... . .....++..|++||.... .....+.|+|+++++++|+..| .|
T Consensus 188 Gls~~~~~~~~~~---~-----~~~~~Gt~~Y~aPE~~~~-----~~~s~k~DVwSlGvilyeLltG~~P 244 (496)
T PTZ00283 188 GFSKMYAATVSDD---V-----GRTFCGTPYYVAPEIWRR-----KPYSKKADMFSLGVLLYELLTLKRP 244 (496)
T ss_pred ccCeecccccccc---c-----cccccCCcceeCHHHhCC-----CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9998754322110 0 011234556777776543 3456789999999999999998 44
No 115
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=253.59 Aligned_cols=200 Identities=26% Similarity=0.307 Sum_probs=165.3
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
...+....+++++.||+|.||.||+|.++. ...||+|.++...... +.+.+|+++|++|+|+|||++++++..++
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~--~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~ 274 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNG--STKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQE 274 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcC--CCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCC
Confidence 345666778889999999999999999996 5689999998764443 44668999999999999999999999988
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|||||||+.|+|.++|+...+..+.....+.++.|||+|++||+++++|||||-+.||||+++..+||+|||+|+..+
T Consensus 275 piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC
Confidence 99999999999999999988667889999999999999999999999999999999999999999999999999999433
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
.+.-. .. .+ ...---|.+||-...+. -..+.|+||-+..+.|+..
T Consensus 355 d~~Y~-~~-~~-------~kfPIkWtAPEa~~~~~-----FS~kSDVWSFGVlL~E~fT 399 (468)
T KOG0197|consen 355 DDEYT-AS-EG-------GKFPIKWTAPEALNYGK-----FSSKSDVWSFGVLLWELFT 399 (468)
T ss_pred CCcee-ec-CC-------CCCCceecCHHHHhhCC-----cccccceeehhhhHHHHhc
Confidence 32211 11 10 01122477887664443 4578999999999999753
No 116
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=248.38 Aligned_cols=202 Identities=31% Similarity=0.470 Sum_probs=178.3
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..+..+.|++-++||+|+||.||-|+.+. +|+.+|+|.+.+..... .......+|..||.++..+.||.+--.|+..+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvra-TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRA-TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEec-chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 34566889999999999999999998888 99999999987664443 34456788999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|+||..|.||+|.-+|....+..|++..++.++.+|+.||++||..+||+|||||+|||+|+.|+++|+|+|+|..+.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 99999999999999999988777789999999999999999999999999999999999999999999999999998776
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..... ..+.|+.|||+||....++ .....|-|+++|+++|+.+|
T Consensus 339 ~g~~~-----------~~rvGT~GYMAPEvl~ne~-----Y~~s~Dwf~lGCllYemi~G 382 (591)
T KOG0986|consen 339 EGKPI-----------RGRVGTVGYMAPEVLQNEV-----YDFSPDWFSLGCLLYEMIAG 382 (591)
T ss_pred CCCcc-----------ccccCcccccCHHHHcCCc-----ccCCccHHHHHhHHHHHHcc
Confidence 55432 2348899999999987666 34677889999999999999
No 117
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-32 Score=243.28 Aligned_cols=198 Identities=29% Similarity=0.424 Sum_probs=164.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|++.+.||+|+||.||++.+.. +++.||+|.+....... .....+.+|+.+++.++|+||+.+++.+...+.+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcC-CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 47888999999999999999887 78999999987643322 33456778999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.......+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++.........
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~- 158 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI- 158 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc-
Confidence 9999999999886554556899999999999999999999999999999999999999999999999998654322111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||.... .....+.|+|+++++++|+..| .|
T Consensus 159 ----------~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~l~~g~~P 200 (285)
T cd05630 159 ----------KGRVGTVGYMAPEVVKN-----ERYTFSPDWWALGCLLYEMIAGQSP 200 (285)
T ss_pred ----------cCCCCCccccChHHHcC-----CCCCCccccHHHHHHHHHHHhCCCC
Confidence 11245667888887643 2345678999999999999999 44
No 118
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-32 Score=270.68 Aligned_cols=209 Identities=21% Similarity=0.322 Sum_probs=169.1
Q ss_pred CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913 92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV 171 (317)
Q Consensus 92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 171 (317)
+..+....++|++++.||+|+||.||+|.+.. ++..||+|++............+..|+.+++.|+|||||+++++|..
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~-tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d 83 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKR-TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN 83 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECC-CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence 45567778999999999999999999999887 78899999998765566667789999999999999999999998854
Q ss_pred --cCEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-------CCeeccCCCCcEEEcc---
Q 042913 172 --SHYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHAL-------GIIYRDLKPENILLRE--- 237 (317)
Q Consensus 172 --~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~-------~ivHrDikp~Nill~~--- 237 (317)
...+||||||+++++|.++|... ....+++..++.|+.||+.||.|||.. +||||||||+||||+.
T Consensus 84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 84 KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 46799999999999999998642 235699999999999999999999985 4999999999999964
Q ss_pred --------------CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCC
Q 042913 238 --------------DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHP 303 (317)
Q Consensus 238 --------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~ 303 (317)
.+.+||+|||+++........ ....++..|++||....... .....+|+|++
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-----------~s~vGTp~YmAPEvL~ge~~---~~s~KSDVWSL 229 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA-----------HSCVGTPYYWSPELLLHETK---SYDDKSDMWAL 229 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccccc-----------cccCCCccccCHHHHhccCC---CCCchhHHHHH
Confidence 235999999999765432210 11245566788876543221 23467899999
Q ss_pred cccccccCCC-CC
Q 042913 304 AQYSVEQPGG-VP 315 (317)
Q Consensus 304 ~~~~~e~~~G-~p 315 (317)
+++++|+..| .|
T Consensus 230 G~ILYELLTGk~P 242 (1021)
T PTZ00266 230 GCIIYELCSGKTP 242 (1021)
T ss_pred HHHHHHHHHCCCC
Confidence 9999999999 44
No 119
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=226.73 Aligned_cols=205 Identities=19% Similarity=0.267 Sum_probs=172.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 174 (317)
.+..+++..+..||+|++|.|-+.++.. +|...|+|.+..... .+..+++.+|+++..+. .+|++|.+||.+...+.
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~-sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQ-SGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeecc-CCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 4555667778889999999999988877 899999999977653 45556778888876554 69999999999999999
Q ss_pred EEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 175 ICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
+|+.||.| .-+|..+.++ ..++.+++..+-+|+..++.||.|||++ .|+|||+||+||||+.+|++|+||||++-.
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 99999999 7788766543 2467899999999999999999999985 899999999999999999999999999865
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+...-. ..-..||.-||+||...+++++- ....++|+||++.+++|++.| .|
T Consensus 199 L~dSiA-----------kt~daGCkpYmaPEri~~e~n~~-gY~vksDvWSLGItmiElA~lr~P 251 (282)
T KOG0984|consen 199 LVDSIA-----------KTMDAGCKPYMAPERINPELNQK-GYSVKSDVWSLGITMIEMAILRFP 251 (282)
T ss_pred ehhhhH-----------HHHhcCCCccCChhhcCcccCcc-cceeehhhhhhhhhhhhhhhcccc
Confidence 533221 11237999999999999998885 778999999999999999988 54
No 120
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.9e-32 Score=237.47 Aligned_cols=199 Identities=21% Similarity=0.313 Sum_probs=170.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|.+.+.||+|++|.||+|.+.. +++.|++|.+............+.+|+++++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKA-DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcC-CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 58889999999999999998877 78999999997665556667789999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++..........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999999775557789999999999999999999999999999999999999999999999999987654322111
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...+...|.+||+.... ....+.|+|+++++++|+..| .|
T Consensus 160 ----------~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~~l~~g~~p 200 (256)
T cd08529 160 ----------TIVGTPYYLSPELCEDK-----PYNEKSDVWALGVVLYECCTGKHP 200 (256)
T ss_pred ----------ccccCccccCHHHhcCC-----CCCCccchHHHHHHHHHHHhCCCC
Confidence 11234567888876543 234678999999999999999 55
No 121
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-32 Score=257.84 Aligned_cols=204 Identities=22% Similarity=0.348 Sum_probs=178.2
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEE-----ec
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLE-----VS 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~-----~~ 172 (317)
...|.|.+.||.|.+|+||+++..+ +++..|+|+..... +.-+++..|.++|+.+. |||++.+|++|. .+
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~-~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVK-TGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeee-cCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 3578999999999999999999888 88999999987653 23345677888998874 999999999985 45
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+.+|||||||.+|+.-|+++...+.++.|..+..|++.++.||.|||.+.++|||||-.|||++.++.|||+|||++.++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 78999999999999999998877889999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
+.......+.+|+ ..||+||.+..+=.....-..|+|.|+|+.+.+|+..| .|+
T Consensus 174 dsT~grRnT~iGt----------P~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl 228 (953)
T KOG0587|consen 174 DSTVGRRNTFIGT----------PYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL 228 (953)
T ss_pred ecccccccCcCCC----------cccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence 8766655555544 56999999987766666678999999999999999999 443
No 122
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-32 Score=245.70 Aligned_cols=200 Identities=22% Similarity=0.287 Sum_probs=162.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|.+.+.||+|+||.||+|.+.. +++.||+|.+..... ......+.+|+++++.++|+||+++++++..++..++
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKL-TENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecC-CCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 34789999999999999999998876 788999999875432 2223456789999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 82 VFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 999995 5888887554 34578999999999999999999999999999999999999999999999999975433221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.. ....++..|++||..... .....+.|+|+++++++|+..|.|
T Consensus 160 ~~----------~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~il~el~tg~~ 203 (309)
T cd07872 160 TY----------SNEVVTLWYRPPDVLLGS----SEYSTQIDMWGVGCIFFEMASGRP 203 (309)
T ss_pred cc----------ccccccccccCCHHHhCC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 11 112345567788765422 123567899999999999999944
No 123
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-32 Score=257.62 Aligned_cols=195 Identities=21% Similarity=0.241 Sum_probs=153.9
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
..++|++++.||+|+||.||+|.+.. +++.||||.+.... ....+|+.+++.++|+||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICID-TSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECC-CCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 34689999999999999999998876 78999999885432 2235699999999999999999876432
Q ss_pred ---CEEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeee
Q 042913 173 ---HYICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDF 246 (317)
Q Consensus 173 ---~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DF 246 (317)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||+.+|+||||||+|||++.++ .+||+||
T Consensus 137 ~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 137 EKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred CCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 35779999995 677766642 2346789999999999999999999999999999999999999655 7999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
|+|+.+....... ...++..|++||..... .......|+|++|++++|+..|.|
T Consensus 216 Gla~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlGvil~elltG~~ 269 (440)
T PTZ00036 216 GSAKNLLAGQRSV-----------SYICSRFYRAPELMLGA----TNYTTHIDLWSLGCIIAEMILGYP 269 (440)
T ss_pred ccchhccCCCCcc-----------cCCCCcCccCHHHhcCC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9998764322110 11344568888865322 123567899999999999999954
No 124
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-32 Score=243.63 Aligned_cols=197 Identities=23% Similarity=0.265 Sum_probs=156.4
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc---CCCCcceEEEEEEe-----c
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML---DHPFLPTLYAHLEV-----S 172 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~-----~ 172 (317)
+|++.+.||+|+||.||+|.+.. +++.||+|.+............+.+|+++++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPH-SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECC-CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 58999999999999999999887 789999999875432222223455677766655 79999999998754 3
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..++++|||+. ++|.+++.......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999995 68988887655566899999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
...... ....++..|++||.... .....+.|+|++|++++|+..|.|
T Consensus 159 ~~~~~~-----------~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~l~~g~~ 205 (288)
T cd07863 159 SCQMAL-----------TPVVVTLWYRAPEVLLQ-----STYATPVDMWSVGCIFAEMFRRKP 205 (288)
T ss_pred cCcccC-----------CCccccccccCchHhhC-----CCCCCcchhhhHHHHHHHHHhCCc
Confidence 422110 11134556778876643 234567899999999999998865
No 125
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-32 Score=251.21 Aligned_cols=195 Identities=16% Similarity=0.225 Sum_probs=160.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec----
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS---- 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 172 (317)
...++|++.+.||+|+||.||+|.+.. +++.||+|.+............+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecC-CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 346899999999999999999998776 789999999976554555667788999999999999999999988543
Q ss_pred --CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 173 --HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 173 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
...|+||||+ .++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 93 EFQDVYLVMELM-DANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ccceeEEEhhhh-cccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 3579999999 456777663 348889999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....... .....++..|++||.... .....+.|+|++|++++|+..|
T Consensus 168 ~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g 214 (355)
T cd07874 168 TAGTSFM-----------MTPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGEMVRH 214 (355)
T ss_pred cCCCccc-----------cCCccccCCccCHHHHcC-----CCCCchhhHHHHHHHHHHHHhC
Confidence 6543211 111244566788876643 2345678999999999999988
No 126
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-32 Score=255.11 Aligned_cols=192 Identities=21% Similarity=0.203 Sum_probs=159.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
....|.+.+.||+|+||.||+|.+.. +++.||||.... ..+.+|+++|+.++|+||+++++++..++..++
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~-~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPD-YPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECC-CCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 34689999999999999999998887 788999996432 235679999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
|||++ .++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+|+.......
T Consensus 238 v~e~~-~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 67888887543 34689999999999999999999999999999999999999999999999999976543221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
. .......++..|++||+.... ....+.|+|+++++++|+..|
T Consensus 316 ~--------~~~~~~~GT~~Y~APE~~~~~-----~~~~~sDvwSlGviL~El~~g 358 (461)
T PHA03211 316 T--------PFHYGIAGTVDTNAPEVLAGD-----PYTPSVDIWSAGLVIFEAAVH 358 (461)
T ss_pred c--------ccccccCCCcCCcCHHHHcCC-----CCCchHHHHHHHHHHHHHHHc
Confidence 1 011122466778888876443 345688999999999998765
No 127
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.9e-32 Score=233.16 Aligned_cols=197 Identities=18% Similarity=0.291 Sum_probs=165.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||++.+.. +++.+|+|.++... .....+.+.+|+.+++.++|+||+++++.+..++.+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVN-SDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcC-CCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 58899999999999999998877 78999999986543 23455678889999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~- 157 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA- 157 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc-
Confidence 9999999998876555678999999999999999999999999999999999999999999999999987654322111
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....+...|++||... ........|+|+++++++|+..|.
T Consensus 158 ---------~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slG~i~~~l~~g~ 197 (255)
T cd08219 158 ---------CTYVGTPYYVPPEIWE-----NMPYNNKSDIWSLGCILYELCTLK 197 (255)
T ss_pred ---------ccccCCccccCHHHHc-----cCCcCchhhhhhhchhheehhhcc
Confidence 1113444577777653 334567899999999999999983
No 128
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.8e-32 Score=250.46 Aligned_cols=194 Identities=16% Similarity=0.240 Sum_probs=159.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
..++|++.+.||+|+||.||+|.+.. +++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAI-LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECC-CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45899999999999999999998876 789999999976554455567788999999999999999999887533
Q ss_pred -CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 173 -HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 173 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
..+|+||||+ .++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus 101 ~~~~~lv~e~~-~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 101 FQDVYIVMELM-DANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred cCeEEEEEeCC-CCCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 4579999999 567777763 2478899999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....... ....++..|++||.... .....+.|+|++|++++|+..|
T Consensus 176 ~~~~~~~-----------~~~~~t~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g 221 (364)
T cd07875 176 AGTSFMM-----------TPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGEMIKG 221 (364)
T ss_pred cCCCCcc-----------cCCcccCCcCCHHHHhC-----CCCCchhhHHhHHHHHHHHHhC
Confidence 5332110 11234566788876643 3345689999999999999998
No 129
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.3e-32 Score=241.11 Aligned_cols=205 Identities=23% Similarity=0.355 Sum_probs=169.9
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
...+.|++++.||.|+||.||+|.+.. ++..+++|.+... .......+.+|+.+++.++|+||+++++.+..++.+|
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKE-TGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECC-CCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEE
Confidence 344679999999999999999998877 7899999998754 4455677889999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+++++|..++.+. ...+++..++.++.||+.+|.|||+.+|+||||||+||+++.++.++|+|||++.......
T Consensus 86 lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 86 IMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred EEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 999999999998877543 3568999999999999999999999999999999999999999999999999986543221
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.. .....+...|++||+...+.........++|+|++|++++|+..|-|
T Consensus 165 ~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~ 213 (292)
T cd06644 165 QR----------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 213 (292)
T ss_pred cc----------cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCC
Confidence 11 11123455789999876544333344678999999999999999943
No 130
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.2e-32 Score=243.10 Aligned_cols=210 Identities=46% Similarity=0.738 Sum_probs=170.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||+|.... +++.||+|.+....... .....+.+|+++++.++|+||+++++.+......|+|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKG-TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcC-CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 479999999999999999998877 78999999997754333 4567789999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+.+++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99999999999997665678999999999999999999999999999999999999999999999999999766443221
Q ss_pred eeccccc-------------------ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGS-------------------ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~-------------------~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....... ........++..|++||+... .....+.|+|++|++++|+..| .|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Di~slG~ll~~l~~g~~p 231 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-----DGHGSAVDWWTLGILLYEMLYGTTP 231 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-----CCCCchHHHHHHHHHHHHHhhCCCC
Confidence 1100000 001112234556777776643 3346789999999999999998 44
No 131
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=256.22 Aligned_cols=192 Identities=22% Similarity=0.348 Sum_probs=167.7
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
+||+|.||+||.|++.. +...+|||.+... .....+.+..||.+.+.|+|.|||+++|.+..++++-+.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~-tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMD-TQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeecccc-ceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 59999999999999988 8889999998654 34555778899999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeecccccCCCCCCeeeccc
Q 042913 187 LHSLLPKQPNNRF--SLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 187 L~~~l~~~~~~~~--~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
|.++++... +++ .+..+-.+..||++||+|||++.|||||||-+|+||+ -.|.+||+|||.++++........|+.
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 999997664 445 7788899999999999999999999999999999997 578999999999999988877777776
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
|+ .-||+||.+..+.- ..+..+|+||+||+++|+++|-|
T Consensus 738 GT----------LQYMAPEvIDqG~R---GYG~aADIWS~GCT~vEMATGrP 776 (1226)
T KOG4279|consen 738 GT----------LQYMAPEVIDQGPR---GYGKAADIWSFGCTMVEMATGRP 776 (1226)
T ss_pred cc----------hhhhChHhhccCCc---CCCchhhhhhccceeEeeccCCC
Confidence 55 56899887754332 23578999999999999999966
No 132
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.8e-32 Score=239.42 Aligned_cols=200 Identities=24% Similarity=0.339 Sum_probs=168.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|++.+.||+|+||.||++.+.. ++..+++|.+... .......+.+|+++++.++|+||+++++.+...+..|+|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKE-TGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECC-CCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 6788899999999999999887 7889999998654 345567788999999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
+++++|..++... ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus 84 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--- 159 (282)
T cd06643 84 CAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--- 159 (282)
T ss_pred cCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccc---
Confidence 9999998887543 356899999999999999999999999999999999999999999999999998765322111
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....++..|++||+...+...........|+|+++++++|+..|-|
T Consensus 160 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~ 206 (282)
T cd06643 160 -------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEP 206 (282)
T ss_pred -------cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCC
Confidence 11123556799999887555555566788999999999999999843
No 133
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-32 Score=252.42 Aligned_cols=204 Identities=20% Similarity=0.251 Sum_probs=162.6
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE 170 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 170 (317)
.+..++|++.+.||+|+||.||+|.+.. .++..||+|++.... .......+.+|+++++.+ +|+||+++++++.
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3456789999999999999999998643 134579999997543 234456788999999999 8999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCC-------------------------------------------------------
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------- 195 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 195 (317)
..+.+++||||+++|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999998874321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecc
Q 042913 196 -------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 196 -------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~-- 270 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV-- 270 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee--
Confidence 13478888999999999999999999999999999999999999999999999976543322110
Q ss_pred cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.++ ..+...|++||+... .....++|+|+++++++|+.. |
T Consensus 271 ~~~------~~~~~~y~aPE~~~~-----~~~~~~~DvwSlGvil~ellt~G 311 (374)
T cd05106 271 KGN------ARLPVKWMAPESIFD-----CVYTVQSDVWSYGILLWEIFSLG 311 (374)
T ss_pred ccC------CCCccceeCHHHhcC-----CCCCccccHHHHHHHHHHHHhCC
Confidence 000 112345888887643 234578999999999999984 7
No 134
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=221.25 Aligned_cols=199 Identities=25% Similarity=0.333 Sum_probs=161.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
.|.-.++||+|.||+||+++.++ +++.||+|.++.+...+.......+|+.+|+.++|.|||++++....++.+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~-t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCC-ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46667889999999999999888 89999999999877666666778999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|| ..+|..++... ++.+..+.++.++.|+++||.++|+++++||||||.|+||+.+|.+||+|||+|+.++....-..
T Consensus 82 ~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred Hh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 99 88898888654 57799999999999999999999999999999999999999999999999999998765432222
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GVPR 316 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~p~ 316 (317)
..+.+ -|++ ..---||+--| .-..|+|+.+|++.|++. |-|+
T Consensus 160 aevvt-lwyr--ppdvlfgakly-----------~tsidmwsagcifaelanagrpl 202 (292)
T KOG0662|consen 160 AEVVT-LWYR--PPDVLFGAKLY-----------STSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_pred ceeee-eecc--Ccceeeeeehh-----------ccchHhhhcchHHHHHhhcCCCC
Confidence 22211 1111 11112233222 356789999999999875 4554
No 135
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.98 E-value=1.4e-32 Score=252.08 Aligned_cols=204 Identities=20% Similarity=0.231 Sum_probs=161.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE 170 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 170 (317)
.+..++|++.+.||+|+||.||+|.+. ..++..||+|+++... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 345668999999999999999999752 2256789999986543 233446788999999999 8999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCC-------------------------------------------------------
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------- 195 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 195 (317)
..+..++||||+++|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999998885421
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 196 ------------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 196 ------------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12467888999999999999999999999999999999999999999999999976644322
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
... .+ .......|++||..... ......|+|+++++++|+.. |
T Consensus 270 ~~~--~~------~~~~~~~y~aPE~~~~~-----~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 270 YVV--KG------NARLPVKWMAPESIFNC-----VYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred ccc--cC------CCCCCcceeChhHhcCC-----CCCCCCCHHHHHHHHHHHHhcC
Confidence 110 00 01123457777766432 34577999999999999875 5
No 136
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=3.2e-32 Score=237.89 Aligned_cols=199 Identities=19% Similarity=0.284 Sum_probs=164.4
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|++.... ......+.+|+.+++.++|+||+++++.+..++.+|+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLH-TGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECC-CCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 34689999999999999999999876 78899999987542 2334567889999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||+++.......
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 84 CMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 9999999999998854 35689999999999999999999999999999999999999999999999999976542211
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
......+...|++||...... ........|+|+++++++|+..|
T Consensus 162 ----------~~~~~~~~~~y~~PE~~~~~~--~~~~~~~~Dvws~G~il~el~~g 205 (267)
T cd06646 162 ----------KRKSFIGTPYWMAPEVAAVEK--NGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred ----------ccCccccCccccCHhHccccc--CCCCcchhhHHHHHHHHHHHHhC
Confidence 111123455688888764321 11234678999999999999888
No 137
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=6.8e-32 Score=238.90 Aligned_cols=194 Identities=32% Similarity=0.541 Sum_probs=165.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.+.. +++.||+|++...... ......+.+|+++++.++||||+++++++...+.+|+|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKG-SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 479999999999999999999887 7899999999765332 34567789999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|.|||++.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~-- 155 (290)
T cd05580 80 MEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT-- 155 (290)
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC--
Confidence 9999999999999654 678999999999999999999999999999999999999999999999999987654321
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....+...|++||..... ......|+|+++++++|+..|.
T Consensus 156 -----------~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~~l~~g~ 195 (290)
T cd05580 156 -----------YTLCGTPEYLAPEIILSK-----GYGKAVDWWALGILIYEMLAGY 195 (290)
T ss_pred -----------CCCCCCccccChhhhcCC-----CCCccccHHHHHHHHHHHHhCC
Confidence 112344567778766432 3456789999999999999993
No 138
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.98 E-value=2.8e-32 Score=245.58 Aligned_cols=204 Identities=17% Similarity=0.240 Sum_probs=163.1
Q ss_pred Eeeeeccc--CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 104 LVRHLGTG--NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 104 i~~~lg~G--~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
++++||+| +|++||++.... +++.||+|.+............+++|+++++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKP-TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecc-cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45679999 789999998887 899999999977654555667788999999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
+++++|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.++++||+.+............
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 99999999996654456899999999999999999999999999999999999999999999999976543221110000
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.. .......+...|++||+...+... ...++|+|+++++++|+..|.
T Consensus 161 ~~---~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~DiwslG~il~el~~g~ 207 (327)
T cd08227 161 VH---DFPKYSVKVLPWLSPEVLQQNLQG---YDAKSDIYSVGITACELANGH 207 (327)
T ss_pred cc---cccccccceecccChHHhhcccCC---CCchhhHHHHHHHHHHHHHCC
Confidence 00 001112334568888887543222 346789999999999999993
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.98 E-value=5.5e-32 Score=235.65 Aligned_cols=199 Identities=24% Similarity=0.328 Sum_probs=165.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc---HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS---AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+.|++.+.||+|++|.||+|.... +++.|++|.+...... ......+.+|+++++.++||||+++++++..+...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVD-TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcC-CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence 468899999999999999998776 7899999998754322 234567889999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+|+||+++++|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 999999999999998653 568899999999999999999999999999999999999999999999999997654321
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.... ......+...|.+||...... ...+.|+|+++++++|+..|
T Consensus 159 ~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~Di~slG~il~el~~g 203 (263)
T cd06625 159 SSGT-------GMKSVTGTPYWMSPEVISGEG-----YGRKADVWSVGCTVVEMLTE 203 (263)
T ss_pred cccc-------cccCCCcCccccCcceeccCC-----CCchhhhHHHHHHHHHHHhC
Confidence 1100 001123445688888775432 56789999999999999999
No 140
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.98 E-value=1.5e-32 Score=248.92 Aligned_cols=194 Identities=21% Similarity=0.274 Sum_probs=160.4
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------ 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 172 (317)
.++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+++++.++|+||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTR-LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4789999999999999999998877 788999999976544444556778899999999999999999887532
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
...|++++++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999998 8899888743 56999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... ...++..|++||.... ........|+|++|++++|+..|-
T Consensus 169 ~~~~~-------------~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~el~~g~ 213 (343)
T cd07878 169 DDEMT-------------GYVATRWYRAPEIMLN----WMHYNQTVDIWSVGCIMAELLKGK 213 (343)
T ss_pred CCCcC-------------CccccccccCchHhcC----CccCCchhhhHhHHHHHHHHHHCC
Confidence 43211 1134556778876532 123456899999999999999983
No 141
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.98 E-value=1.8e-32 Score=241.11 Aligned_cols=201 Identities=22% Similarity=0.339 Sum_probs=169.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||.|+||.||++.+.. ++..+|+|++... .....+.+.+|+++++.++|+||+++++.+..+...|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 568999999999999999998876 7899999998754 3455577889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++... ...+++..++.++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++.........
T Consensus 82 e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~- 159 (280)
T cd06611 82 EFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK- 159 (280)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc-
Confidence 999999999998653 356899999999999999999999999999999999999999999999999998765332211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||....+.........++|+|+++++++|+..|-
T Consensus 160 ---------~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~ 205 (280)
T cd06611 160 ---------RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205 (280)
T ss_pred ---------cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCC
Confidence 1112345568888887655444445567899999999999999994
No 142
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.6e-33 Score=233.92 Aligned_cols=202 Identities=25% Similarity=0.370 Sum_probs=170.1
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh------hcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL------LSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS 172 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 172 (317)
+.|.-.+.||.|..+.|-+|..+. ++..+|+|++.... ......+.-..|+.||+++ .||||+++.++++.+
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~-t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKE-TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcc-cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 445556669999999999998877 88899999886421 1123445667899999998 499999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..+++|+|.|+.|.|+|++.. .-.++++..+.|++|++.|+.|||.++||||||||+|||++++.++||+|||+|.++
T Consensus 96 sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 999999999999999999955 477999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.+...+. ...|+.||.+||....+..+ ....+...|+|+.+.+++-+..|-|
T Consensus 174 ~~GekLr-----------elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcp 226 (411)
T KOG0599|consen 174 EPGEKLR-----------ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCP 226 (411)
T ss_pred CCchhHH-----------HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCC
Confidence 7765432 23577899999988766444 3344677889999999999999954
No 143
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.98 E-value=5.5e-32 Score=235.57 Aligned_cols=200 Identities=22% Similarity=0.307 Sum_probs=165.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|+++++||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYNN--STKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEecC--CceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 556899999999999999999998664 6789999876532 23467889999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
++|||+++++|.+++.......+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 99999999999999976656678999999999999999999999999999999999999999999999999997654322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
... .....+...|++||+.... ......|+|+++++++|+.. | .|
T Consensus 158 ~~~---------~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~~l~~l~t~g~~p 204 (261)
T cd05072 158 YTA---------REGAKFPIKWTAPEAINFG-----SFTIKSDVWSFGILLYEIVTYGKIP 204 (261)
T ss_pred eec---------cCCCccceecCCHHHhccC-----CCChhhhhhhhHHHHHHHHccCCCC
Confidence 110 0111234568888876432 23457899999999999996 6 44
No 144
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.98 E-value=5.1e-32 Score=236.23 Aligned_cols=199 Identities=18% Similarity=0.219 Sum_probs=164.9
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+...+|.+.+.||+|+||.||+|.+.+ .+..|++|++... ......+.+|+++++.++|+||+++++++..+..++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEec-CCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 456789999999999999999999877 7889999998654 223457888999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
++|||+++++|.+++.......+++..++.++.|++.||.|||+.|++||||||+||++++++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999876555668999999999999999999999999999999999999999999999999997654321
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
... ........+|++||+... .......|+|+++++++|+.. |
T Consensus 159 ~~~---------~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 159 YTA---------HAGAKFPIKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred eec---------cCCCCCccccCCHHHhcc-----CCCCchhHHHHHHHHHHHHHcCC
Confidence 110 001122345778876643 334567899999999999986 6
No 145
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=7.6e-33 Score=261.83 Aligned_cols=205 Identities=20% Similarity=0.304 Sum_probs=160.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEE-EE----
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAH-LE---- 170 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~-~~---- 170 (317)
+...+++|.+.|.+|||+.||+|.+.. .+..||+|.+-.. ++..++.+.+|+++|+.|. |+|||.+++. ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~-~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVK-GGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecC-CCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 445678899999999999999999987 5599999998765 6788899999999999998 9999999993 21
Q ss_pred -e-cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeee
Q 042913 171 -V-SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 171 -~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~~kl~DF 246 (317)
. .-+++|+||||.||.|-|++..+....|++.++++|+.|+|+|+.+||..+ |||||||-+||||..+|..|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 1 235789999999999999998766677999999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccc---eeccchhhhccCCccccccc
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME---FVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~ 310 (317)
|.|...-...+ ....+...... -.-|-+|-|+++|+.+ ...=..+.|+|+|||+++-+
T Consensus 191 GSatt~~~~~~-~~~e~~~ve~e-----I~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 191 GSATTKILSPT-SAQEVNYVEEE-----IEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred cccccccCCCc-cHHHHHHHHHH-----HHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 99854332221 01111111122 2234445555544433 33447889999999987654
No 146
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.98 E-value=8.5e-32 Score=234.48 Aligned_cols=198 Identities=23% Similarity=0.275 Sum_probs=163.5
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||+|++|.||+|.+.. ++.||+|.+..... ..+.+.+|+.+++.++|+||+++++++...+..+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNN--TTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecC--CeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 456789999999999999999998654 57899999875432 2356788999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+++++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||+++......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999976555678999999999999999999999999999999999999999999999999998765221
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.. ...+ ......|++||+.... ....++|+|+++++++|+.. |
T Consensus 158 ~~--~~~~-------~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 158 YE--AREG-------AKFPIKWTAPEAALYN-----RFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred cc--ccCC-------CcCceeccCccccccC-----CCCchhhHHHHHHHHHHHHhcC
Confidence 10 1111 0112467888866432 34567999999999999987 6
No 147
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.98 E-value=7.6e-32 Score=234.14 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=160.6
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||++.+.. +..+|+|.+...... ...+.+|+++++.++||||+++++++......++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRA--QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEecc--CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 34679999999999999999998764 568999988654322 3467889999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||+++.......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999999986542 4589999999999999999999999999999999999999999999999999876532221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
... . .......|++||+.. ......+.|+|+++++++|+.. | .|
T Consensus 156 ~~~--~-------~~~~~~~y~aPE~~~-----~~~~~~~~Di~s~G~~l~el~~~g~~p 201 (256)
T cd05114 156 TSS--S-------GAKFPVKWSPPEVFN-----FSKYSSKSDVWSFGVLMWEVFTEGKMP 201 (256)
T ss_pred ecc--C-------CCCCchhhCChhhcc-----cCccchhhhhHHHHHHHHHHHcCCCCC
Confidence 100 0 011223577777654 3345678999999999999987 6 44
No 148
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=8.7e-35 Score=238.03 Aligned_cols=200 Identities=23% Similarity=0.315 Sum_probs=166.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..+.|.+.++||+|.|+.||+|.... +|+.+|+|+++...+.....+++.+|+.|.+.|+||||+++.+.+...++.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~-tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhcc-chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 345678899999999999999997776 8999999999887777778899999999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecccccCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDLCFQSD 253 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~a~~~~ 253 (317)
||||++.|++|..-|-.+ ..+++..+-.+++||+++|.|+|.+||||||+||+|+|+-. .--+||+|||+|.++.
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999997665443 55789999999999999999999999999999999999953 3369999999999876
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
... ..|..-|+|.|.++++..-...+.-.|+|+-+.++.=+..| +|
T Consensus 165 -~g~---------------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~P 211 (355)
T KOG0033|consen 165 -DGE---------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 211 (355)
T ss_pred -Ccc---------------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCC
Confidence 222 22333344445554555555666778899988888777777 44
No 149
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-33 Score=274.26 Aligned_cols=204 Identities=23% Similarity=0.313 Sum_probs=175.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|+-.-.||.|.||.||-|.+.+ +|+..|+|.+............+.+|..++..++|||+|++||+-.+.+..++.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~-tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLD-TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCC-ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 56667789999999999998888 89999999998766556677889999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
||++|+|.+++.. +...++.....+..|++.|+.|||+.|||||||||+||+++.+|.+|++|||.|+++........
T Consensus 1315 yC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 9999999999954 45677888888899999999999999999999999999999999999999999988876532221
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.+-..-.|+..||+||.+.+-.- ....+.+|+|++||+.+||+.| -|
T Consensus 1393 ------~el~~~~GT~~YMAPEvit~t~~--kG~~~A~DiWslGCVVlEM~tGkrP 1440 (1509)
T KOG4645|consen 1393 ------GELQSMMGTPMYMAPEVITGTKG--KGHGGAADIWSLGCVVLEMATGKRP 1440 (1509)
T ss_pred ------HHHHhhcCCchhcCchhhccccc--CCCCcchhhhcccceEEEeecCCCc
Confidence 12223478888999998865433 3457899999999999999999 55
No 150
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.98 E-value=6.8e-32 Score=248.81 Aligned_cols=207 Identities=21% Similarity=0.226 Sum_probs=162.5
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHL 169 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~ 169 (317)
..+..++|++++.||+|+||.||+|.+.. ..+..||||++.... .....+.+.+|+++++.+. ||||+++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34567899999999999999999998643 123579999996542 3344567899999999996 99999999999
Q ss_pred EecCEEEEEEcccCCCChhcccccCC------------------------------------------------------
Q 042913 170 EVSHYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------ 195 (317)
Q Consensus 170 ~~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------ 195 (317)
...+.+|+||||+++|+|.+++....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999999999998875421
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE
Q 042913 196 ----------------------------------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL 235 (317)
Q Consensus 196 ----------------------------------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill 235 (317)
...+++..++.++.||+.||.|||+.+|+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 1247788889999999999999999999999999999999
Q ss_pred ccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-
Q 042913 236 REDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G- 313 (317)
Q Consensus 236 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G- 313 (317)
+.++.+||+|||+++.......... .....++..|++||..... ....+.|+|+++++++|+.. |
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVS--------KGSTFLPVKWMAPESIFDN-----LYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccc--------cCCcCCCcceEChhhhcCC-----CCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999976543221100 0011233457777765432 23567899999999999863 4
Q ss_pred CC
Q 042913 314 VP 315 (317)
Q Consensus 314 ~p 315 (317)
.|
T Consensus 338 ~P 339 (400)
T cd05105 338 TP 339 (400)
T ss_pred CC
Confidence 55
No 151
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.98 E-value=6.3e-32 Score=238.12 Aligned_cols=199 Identities=19% Similarity=0.256 Sum_probs=162.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|++|.||+|.... ++..||+|.+............+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKK-TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECC-CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999998876 78999999987654333444678889999999999999999999999999999999
Q ss_pred ccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 181 YCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|++ ++|.+++.... +..+++..++.++.||+.||.|||+.+|+|+||||+|||++.++.++|+|||++.........
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~- 157 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV- 157 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc-
Confidence 995 68888875533 356899999999999999999999999999999999999999999999999999765432111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....+...|++||...... ......|+|++|++++|+..|.|
T Consensus 158 ---------~~~~~~~~~y~aPE~~~~~~----~~~~~~Dv~slG~il~~l~tg~~ 200 (285)
T cd07861 158 ---------YTHEVVTLWYRAPEVLLGSP----RYSTPVDIWSIGTIFAEMATKKP 200 (285)
T ss_pred ---------ccCCcccccccChHHhcCCC----CcCcHHHHHHHHHHHHHHHHCCC
Confidence 01113345688888654321 22467899999999999999954
No 152
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.98 E-value=1.1e-31 Score=232.97 Aligned_cols=197 Identities=23% Similarity=0.288 Sum_probs=167.4
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++++.||.|+||.||.+.... +++.+++|.+............+.+|+++++.++|+||+++++++...+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTE-DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcC-CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999998877 78999999987665556666788899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||||+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~- 158 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMA- 158 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccc-
Confidence 9999999999976555678999999999999999999999999999999999999999999999999997664433211
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....+...|.+||+... ......+|+|+++++++|+..|
T Consensus 159 ---------~~~~~~~~y~ape~~~~-----~~~~~~~Dv~slG~i~~~l~~g 197 (256)
T cd08221 159 ---------ETVVGTPYYMSPELCQG-----VKYNFKSDIWALGCVLYELLTL 197 (256)
T ss_pred ---------cccCCCccccCHhhcCC-----CCCCCcchhHHHHHHHHHHHHC
Confidence 11234455677776542 2344678999999999999888
No 153
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=1.7e-31 Score=231.79 Aligned_cols=197 Identities=20% Similarity=0.254 Sum_probs=164.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-cCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-SHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 179 (317)
.|++.+.||+|++|.||++.+.. +++.||+|.+..........+.+.+|+++++.++|+|++++++.+.. +..+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRT-DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcC-CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 48999999999999999999876 68899999997765555666778999999999999999999988764 45689999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.......+++..++.++.|++.+|.+||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 158 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM- 158 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCc-
Confidence 9999999999997655567899999999999999999999999999999999999999999999999998765432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.....+...|++||... ........|+|+++++++|+..|
T Consensus 159 ---------~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08223 159 ---------ASTLIGTPYYMSPELFS-----NKPYNYKSDVWALGCCVYEMATL 198 (257)
T ss_pred ---------cccccCCcCccChhHhc-----CCCCCchhhhHHHHHHHHHHHcC
Confidence 11123445577777653 33445678999999999999988
No 154
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.98 E-value=8.6e-32 Score=241.21 Aligned_cols=200 Identities=18% Similarity=0.222 Sum_probs=159.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+...+|++.+.||+|+||.||+|.+.. ++. .||+|++.... .......+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEec-CCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 456789999999999999999998764 333 48999986432 344556788999999999999999999998764
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..++++||+++|+|.+++... ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 568999999999999998754 345889999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.......... .......|++||+... .....+.|+|+++++++|+.. |
T Consensus 160 ~~~~~~~~~~--------~~~~~~~y~apE~~~~-----~~~~~~~Di~slGv~l~el~t~g 208 (316)
T cd05108 160 GADEKEYHAE--------GGKVPIKWMALESILH-----RIYTHQSDVWSYGVTVWELMTFG 208 (316)
T ss_pred cCCCcceecc--------CCccceeecChHHhcc-----CCCCchhhhHHHHHHHHHHHcCC
Confidence 5433211110 0112345778877643 234578899999999999764 5
No 155
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=1.1e-31 Score=236.71 Aligned_cols=204 Identities=20% Similarity=0.262 Sum_probs=163.3
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC---CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD---CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
+...+|++.+.||+|+||.||+|.+.. ..+..|++|.+.... .......+.+|+++++.++|+||+++++++....
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 345789999999999999999998632 245789999987543 3445567889999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQP---------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED 238 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~ 238 (317)
..|+||||+.+++|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999884321 2347888899999999999999999999999999999999999
Q ss_pred CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913 239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV 314 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~ 314 (317)
+.+||+|||+++........... ....+...|++||+... .....+.|+|+++++++|+.. |.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~~g~ 224 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQ--------PKSLLPIRWMPPEAIMY-----GKFSSDSDIWSFGVVLWEIFSFGL 224 (283)
T ss_pred CcEEeccccccccccCCcceecc--------cCCCccceecChHHhcc-----CCCCchhhhHHHHHHHHHHHcCCC
Confidence 99999999999765432211000 01122345888887643 234578999999999999997 74
No 156
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=5.4e-32 Score=236.39 Aligned_cols=199 Identities=20% Similarity=0.301 Sum_probs=164.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|+++.. .......+.+|+.+++.++||||+++++.+...+.+|+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~--~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVN-TGELAAIKVIKLE--PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcC-CCcEEEEEEEecC--chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence 34688899999999999999998876 7899999998755 23344567889999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++.. .+.+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 84 CMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred EEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 9999999999999855 35789999999999999999999999999999999999999999999999999876532211
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
. .....++..|++||+..... .......+|+|+++++++|+..|
T Consensus 162 ~----------~~~~~~~~~y~aPE~~~~~~--~~~~~~~~DvwSlG~il~~l~~~ 205 (267)
T cd06645 162 K----------RKSFIGTPYWMAPEVAAVER--KGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred c----------cccccCcccccChhhhcccc--CCCCCchhhhHHHHHHHHHHhcC
Confidence 1 11123556788888753211 11234678999999999999988
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=1.8e-31 Score=234.87 Aligned_cols=189 Identities=24% Similarity=0.322 Sum_probs=158.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++.... .......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLL-TRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcC-CCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 468899999999999999998876 78999999987643 3344567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++........
T Consensus 79 e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~-- 150 (279)
T cd06619 79 EFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA-- 150 (279)
T ss_pred ecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc--
Confidence 99999988654 2368889999999999999999999999999999999999999999999999976532210
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....++..|++||+... .....+.|+|+++++++|+..|
T Consensus 151 ----------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~~l~~g 189 (279)
T cd06619 151 ----------KTYVGTNAYMAPERISG-----EQYGIHSDVWSLGISFMELALG 189 (279)
T ss_pred ----------cCCCCChhhcCceeecC-----CCCCCcchHHHHHHHHHHHHhC
Confidence 11134456777776643 3456789999999999999998
No 158
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=1.4e-31 Score=238.46 Aligned_cols=202 Identities=25% Similarity=0.347 Sum_probs=160.3
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS 172 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 172 (317)
.+..++|++.+.||+|+||.||+|.+.. ++. .+++|.+... ........+.+|++++.++ +|+||+++++++..+
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~-~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEcc-CCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 4567899999999999999999998876 454 4566666432 2345556788899999999 899999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED 238 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~ 238 (317)
+.+|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 99999999999999999986431 2357899999999999999999999999999999999999999
Q ss_pred CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
+.+||+|||+++...... . .........|++||+.... ....+.|+|++|++++|+.. | .|
T Consensus 161 ~~~kl~dfg~~~~~~~~~---~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~ellt~g~~p 223 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV---K--------KTMGRLPVRWMAIESLNYS-----VYTTNSDVWSYGVLLWEIVSLGGTP 223 (303)
T ss_pred CcEEeCccccCcccchhh---h--------cccCCCcccccCHHHHhcc-----CCcccccchhhhhHHHHHHhcCCCC
Confidence 999999999986322110 0 0011123457888866432 23567999999999999985 5 44
No 159
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-32 Score=245.32 Aligned_cols=202 Identities=21% Similarity=0.276 Sum_probs=165.6
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCC---ceEEEEEeeh-hhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTS---ANFALKVVDK-DLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE 170 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~---~~vavK~~~~-~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 170 (317)
..+...+..+.++||+|+||.||+|.+....+ ..||+|..+. .......+.++.+|+++|+.++|||||++||+..
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34455677778999999999999999876323 2389999875 3356788899999999999999999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
....+++|||+|.||+|.++|++.. ..++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+++
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999999998763 369999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
....- ....... .---.|.+||..... -.....|+|+.|.+++|...
T Consensus 311 ~~~~~-~~~~~~~---------klPirWLAPEtl~~~-----~~s~kTDV~sfGV~~~Eif~ 357 (474)
T KOG0194|consen 311 AGSQY-VMKKFLK---------KLPIRWLAPETLNTG-----IFSFKTDVWSFGVLLWEIFE 357 (474)
T ss_pred CCcce-eeccccc---------cCcceecChhhhccC-----ccccccchhheeeeEEeeec
Confidence 65410 0000000 112357788776554 34467899999999999887
No 160
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=2.9e-31 Score=236.57 Aligned_cols=208 Identities=25% Similarity=0.440 Sum_probs=165.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.+.. +++.|++|.+...... ......+.+|+++++.++||||+++++.+..++.+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKE-TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECC-CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 478999999999999999998877 7899999998765332 24456788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||+++........
T Consensus 80 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 80 MEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 9999999999999653 56899999999999999999999999999999999999999999999999998743221111
Q ss_pred ee--cccc---cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VE--TNVG---SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~--~~~~---~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. .... .........++..|++||+... .....+.|+|+++++++|+..| .|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~vl~el~~g~~p 215 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-----QGYGKPVDWWAMGIILYEFLVGCVP 215 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccC-----CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 00 0000 0000011234556888887543 2345778999999999999998 44
No 161
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=1.2e-31 Score=238.51 Aligned_cols=200 Identities=22% Similarity=0.286 Sum_probs=162.6
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|.+..... ......+.+|+.+++.++|+||+++++++...+..++
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKL-TDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcC-CCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 45789999999999999999998876 788999999865422 2223456789999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+. ++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........
T Consensus 82 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 82 VFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred EEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 999995 6898888654 35688999999999999999999999999999999999999999999999999875433221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.. ....+...|++||..... .......|+|+++++++|+..|-|
T Consensus 160 ~~----------~~~~~~~~y~~PE~~~~~----~~~~~~~Dv~slG~~l~el~tg~~ 203 (301)
T cd07873 160 TY----------SNEVVTLWYRPPDILLGS----TDYSTQIDMWGVGCIFYEMSTGRP 203 (301)
T ss_pred cc----------cccceeecccCcHHHhCC----CCCccHHHHHHHHHHHHHHHhCCC
Confidence 10 111334567778765422 234567899999999999999944
No 162
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=1.8e-31 Score=233.21 Aligned_cols=204 Identities=22% Similarity=0.271 Sum_probs=162.9
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
...+|++.+.||+|+||.||+|.+... .+..+|+|.+.... .......+.+|+.+++.++||||+++++++..++..
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 346899999999999999999987642 23479999886543 334456889999999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.+++||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 9999999999999999654 356899999999999999999999999999999999999999999999999999876543
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.....+.. .......|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 160 ~~~~~~~~-------~~~~~~~y~~pe~~~~-----~~~~~~~Dv~slG~~l~ell~~g~~p 209 (267)
T cd05066 160 PEAAYTTR-------GGKIPIRWTAPEAIAY-----RKFTSASDVWSYGIVMWEVMSYGERP 209 (267)
T ss_pred cceeeecC-------CCccceeecCHhHhcc-----CccCchhhhHHHHHHHHHHhcCCCCC
Confidence 32111111 0111234677776643 344578999999999999664 6 44
No 163
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=1.2e-31 Score=233.03 Aligned_cols=198 Identities=24% Similarity=0.297 Sum_probs=161.3
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||++.+.. +..+|+|.+...... ...+.+|+.+++.++||||+++++++.....+++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC--CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 45689999999999999999998764 556999988754322 3567889999999999999999999998889999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+.+++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||.||+++.++.+||+|||+++.......
T Consensus 77 v~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999999986542 3689999999999999999999999999999999999999999999999999876533221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
. ...+ ..+...|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 156 ~--~~~~-------~~~~~~y~~pe~~~~-----~~~~~~~Di~slG~~l~~l~~~g~~p 201 (256)
T cd05113 156 T--SSVG-------SKFPVRWSPPEVLLY-----SKFSSKSDVWAFGVLMWEVYSLGKMP 201 (256)
T ss_pred e--ecCC-------CccChhhCCHHHHhc-----CcccchhHHHHHHHHHHHHhcCCCCC
Confidence 1 1111 123345778877643 234567999999999999986 6 55
No 164
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=8.2e-32 Score=235.80 Aligned_cols=200 Identities=21% Similarity=0.298 Sum_probs=164.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe------c
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV------S 172 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~------~ 172 (317)
+.|++.+.||+|+||.||+|.+.. +++.||+|++.... .....+.+|+.+++.+ +|+||+++++++.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcC-CCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 467888899999999999998877 78999999986542 2235678899999998 69999999999864 3
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..+|++|||+.+++|.+++.......+++..++.++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999997655567899999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... .....++..|++||+...+...........|+|+++++++|+..|
T Consensus 162 ~~~~~~----------~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g 212 (272)
T cd06637 162 DRTVGR----------RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212 (272)
T ss_pred cccccc----------CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence 432211 112245667889988754333333445689999999999999998
No 165
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=229.08 Aligned_cols=193 Identities=21% Similarity=0.299 Sum_probs=158.5
Q ss_pred cCCeEEe-eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe----c
Q 042913 99 LRHLKLV-RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV----S 172 (317)
Q Consensus 99 ~~~y~i~-~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~ 172 (317)
.++|.+. ++||-|-.|+|..|..+. +++.+|+|++... .+.++|+++.... .|+|||.++++|+. .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~-T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKR-TQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEecc-chhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 3556654 578999999999998777 9999999998543 4567889887666 49999999999853 4
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeeccc
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDLC 249 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~a 249 (317)
..+.+|||.++||.|+..+..+..+.|++.++..|+.||+.|+.|||+.+|.||||||+|+|... +..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 56889999999999999999988888999999999999999999999999999999999999974 557999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
+.-... ....+.+.| ..|.+||....+- .+..+|+|+++..++=+.||.|
T Consensus 212 K~t~~~-~~L~TPc~T----------PyYvaPevlg~eK-----ydkscdmwSlgVimYIlLCGyP 261 (400)
T KOG0604|consen 212 KETQEP-GDLMTPCFT----------PYYVAPEVLGPEK-----YDKSCDMWSLGVIMYILLCGYP 261 (400)
T ss_pred cccCCC-ccccCCccc----------ccccCHHHhCchh-----cCCCCCccchhHHHHHhhcCCC
Confidence 876542 233444433 3466666554332 4578899999999999999977
No 166
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=2.5e-31 Score=232.03 Aligned_cols=201 Identities=23% Similarity=0.323 Sum_probs=163.6
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh---hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL---LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHY 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 174 (317)
.+|++.+.||+|+||.||++.+.. +++.|++|.+.... ........+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDAD-TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcC-CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence 578999999999999999998876 78999999886432 123456788999999999999999999998865 356
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
++++|||+++++|.+++... ..+++..++.++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 88999999999999998653 5588899999999999999999999999999999999999999999999999876543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...... ......++..|++||..... ....+.|+|+++++++|+..| .|
T Consensus 159 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~~g~~p 208 (265)
T cd06652 159 ICLSGT-------GMKSVTGTPYWMSPEVISGE-----GYGRKADIWSVGCTVVEMLTEKPP 208 (265)
T ss_pred cccccc-------ccccCCCCccccChhhhcCC-----CCCcchhHHHHHHHHHHHhhCCCC
Confidence 211000 01112355678888876432 335789999999999999998 44
No 167
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=2.5e-31 Score=237.44 Aligned_cols=193 Identities=23% Similarity=0.281 Sum_probs=162.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||++.+.. ++..+|+|.+.... ......++.+|+++++.++||||+++++.+..++.+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRP-SGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcC-CCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 479999999999999999998877 78899999986542 3445567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++|+||||+|||++.++.++|+|||++........
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA- 155 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccc-
Confidence 999999999999654 668999999999999999999997 5999999999999999999999999999865432110
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....+...|.+||.... .....++|+|+++++++|+..|
T Consensus 156 -----------~~~~~~~~~~aPE~~~~-----~~~~~~~DiwslG~~l~~l~~g 194 (308)
T cd06615 156 -----------NSFVGTRSYMSPERLQG-----THYTVQSDIWSLGLSLVEMAIG 194 (308)
T ss_pred -----------ccCCCCcCccChhHhcC-----CCCCccchHHHHHHHHHHHHhC
Confidence 01134456777776532 3345679999999999999998
No 168
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5e-32 Score=242.56 Aligned_cols=192 Identities=26% Similarity=0.378 Sum_probs=161.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
+.||.|.||+||-|+.++ +|+.||||++.+..+..+....+++|+.||+.++||.||.+-..|+..+.+|+|||-+ +|
T Consensus 570 evLGSGQFG~VYgg~hRk-tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRK-TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred hhccCCcceeeecceecc-cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 569999999999999988 9999999999988777777789999999999999999999999999999999999999 77
Q ss_pred ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeecccccCCCCCCeeecc
Q 042913 186 DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED---GHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 186 sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
++.+.|-....+++++...+.++.||+.||+|||-++|+|+||||+|||+... -.+||||||+|+.+++..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks------ 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS------ 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh------
Confidence 77776666667899999999999999999999999999999999999999643 379999999999775533
Q ss_pred cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+|+-..|+..|.+|| +..-+...|.-|+|+-+.+++--.-| +|
T Consensus 722 -----FRrsVVGTPAYLaPE-----VLrnkGyNrSLDMWSVGVIiYVsLSGTFP 765 (888)
T KOG4236|consen 722 -----FRRSVVGTPAYLAPE-----VLRNKGYNRSLDMWSVGVIIYVSLSGTFP 765 (888)
T ss_pred -----hhhhhcCCccccCHH-----HHhhccccccccceeeeEEEEEEeccccc
Confidence 334445555555555 55555556778899988877765555 44
No 169
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=1.9e-31 Score=232.80 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=164.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||+|.... +++.||+|.+.... ........+.+|+++++.++||||+++++++...+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLL-DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeC-CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 689999999999999999998877 78999999886532 2345556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||+++++|.+++... ....+++..++.++.||+.||.|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 9999999999887532 23457899999999999999999999999999999999999999999999999987654322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.... ...+...|++||+... .......|+|+++++++|+..| .|
T Consensus 161 ~~~~----------~~~~~~~~~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~p 205 (267)
T cd08228 161 TAAH----------SLVGTPYYMSPERIHE-----NGYNFKSDIWSLGCLLYEMAALQSP 205 (267)
T ss_pred HHHh----------cCCCCccccChhhhcc-----CCCCchhhHHHHHHHHHHHhcCCCC
Confidence 1111 1123445777776643 2345678999999999999988 44
No 170
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-31 Score=241.48 Aligned_cols=205 Identities=21% Similarity=0.273 Sum_probs=170.9
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 174 (317)
.++...|+++++||.||.+.||++...+ .+.+|+|.+.....+.+.+.-+.+|+.+|.+|+ |.+||++|+|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~--~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSD--KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCC--CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 4667899999999999999999997654 678888888777778888999999999999997 8999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|||||+- ..+|..+|+... ...+...++.+..||+.|++++|+.||||.||||.|+|+-. |.+||+|||+|..+..
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred EEEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 99999987 789999997653 33343478889999999999999999999999999999975 8999999999988766
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccc------eeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME------FVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~------~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..+. ..+.-..|+..||+||-....-.. -.--.+..|+||+||++++|.=|
T Consensus 512 DTTs--------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYg 568 (677)
T KOG0596|consen 512 DTTS--------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYG 568 (677)
T ss_pred cccc--------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhc
Confidence 5543 223334677889999986533221 12247899999999999999877
No 171
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9e-32 Score=245.13 Aligned_cols=189 Identities=21% Similarity=0.296 Sum_probs=156.2
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
....|++++.||+|+||.||+|.... +++.||+|+.... ....|+.+++.++|+||+++++++......++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPG-QPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECC-CCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 34579999999999999999999877 7889999986433 23468999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
|||++ .++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 212 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA 212 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcc
Confidence 99999 67888887543 45689999999999999999999999999999999999999999999999999864322111
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
. ....++..|++||..... ....+.|+|++|++++|+..|
T Consensus 213 ~-----------~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvvl~ell~~ 252 (357)
T PHA03209 213 F-----------LGLAGTVETNAPEVLARD-----KYNSKADIWSAGIVLFEMLAY 252 (357)
T ss_pred c-----------ccccccccccCCeecCCC-----CCCchhhHHHHHHHHHHHHHc
Confidence 0 112456678888876432 335678999999999998753
No 172
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=3.1e-31 Score=231.60 Aligned_cols=201 Identities=20% Similarity=0.248 Sum_probs=162.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
..++|++.+.||+|+||.||+|.+... +...||+|.+.... .......+.+|+.+++.++|+||+++++.+...+..
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 346799999999999999999988642 24589999986543 344456788899999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+|||++.++.++|+|||+++.....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 9999999999999998654 346899999999999999999999999999999999999999999999999999877522
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.....+. .......|++||+.... ....+.|+|+++++++|+.. |
T Consensus 160 ~~~~~~~--------~~~~~~~y~~Pe~~~~~-----~~~~~~Dv~slG~~l~~l~~~g 205 (266)
T cd05033 160 EATYTTK--------GGKIPIRWTAPEAIAYR-----KFTSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred ccceecc--------CCCCCccccChhhhccC-----CCccccchHHHHHHHHHHHccC
Confidence 2111111 01122457778766533 33567899999999999765 6
No 173
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=1.5e-31 Score=235.58 Aligned_cols=204 Identities=21% Similarity=0.302 Sum_probs=162.6
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|..... ....|++|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 3456899999999999999999987641 22679999886542 344556789999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPN--------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED 238 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~ 238 (317)
+..|++|||+++++|.+++..... ..+++..++.++.||+.||.|||+.+++|+||||+||+++.+
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 999999999999999998865311 457889999999999999999999999999999999999999
Q ss_pred CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913 239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV 314 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~ 314 (317)
+.++|+|||+++......... ......+...|++||+.... ....+.|+|+++++++|+.. |.
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~-----~~~~~sDv~slG~il~el~~~g~ 224 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYR--------VQSKSLLPVRWMPPEAILYG-----KFTTESDIWSFGVVLWEIFSYGL 224 (283)
T ss_pred CcEEECCCcceeecccccccc--------ccCCCcccccccCHHHhccC-----cCchhhhHHHHHHHHHHHHcCCC
Confidence 999999999997543221110 00111233558888876432 23467899999999999975 73
No 174
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=3.2e-31 Score=233.59 Aligned_cols=199 Identities=23% Similarity=0.308 Sum_probs=166.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||+|.+.. ++..|++|++............+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRE-TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECC-CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999876 68999999998765444556778999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+ +++|.+++... ...+++..++.++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-- 155 (286)
T cd07832 80 YM-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR-- 155 (286)
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC--
Confidence 99 99999998654 366899999999999999999999999999999999999999999999999998766433210
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
......++..|++||+.... .......|+|++|++++|+..|.|
T Consensus 156 -------~~~~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~~l~~l~tg~~ 199 (286)
T cd07832 156 -------LYSHQVATRWYRAPELLYGA----RKYDPGVDLWAVGCIFAELLNGSP 199 (286)
T ss_pred -------ccccccCcccccCceeeecc----ccCCchhHHHHHHHHHHHHHcCCc
Confidence 01112455568888865321 123568999999999999999954
No 175
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.2e-31 Score=236.74 Aligned_cols=202 Identities=22% Similarity=0.374 Sum_probs=167.6
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++++.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+++++.++|+||+++++.+...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRP-TGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcC-CCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 468899999999999999999886 78999999886542 3444577889999999999999999999999999999999
Q ss_pred cccCCCChhcccccC-CCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 180 DYCPNGDLHSLLPKQ-PNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 180 e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||+++++|..++... ....+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 999999999888542 12468999999999999999999997 5999999999999999999999999999876532211
Q ss_pred eeecccccccccccccccCCCCCccccccccc-ceeccchhhhccCCcccccccCCC-CC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVM-EFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++.+|++||....... .........|+|+++++++|+..| .|
T Consensus 159 ------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 206 (286)
T cd06622 159 ------------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP 206 (286)
T ss_pred ------------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCC
Confidence 11235567899998754433 233446789999999999999998 55
No 176
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=5.5e-31 Score=229.08 Aligned_cols=200 Identities=22% Similarity=0.320 Sum_probs=166.5
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.++|++.+.||.|+||.||+|.... +++.+++|++.... ......+.+|+++++.++||||+++++.+...+.+|++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIA-TGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecC-CCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 3689999999999999999998876 67899999997653 33567889999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ...+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.........
T Consensus 79 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 157 (262)
T cd06613 79 MEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK 157 (262)
T ss_pred EeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence 9999999999988653 256899999999999999999999999999999999999999999999999998765432111
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|++||....... ......+|+|++++.++|+..|.
T Consensus 158 ----------~~~~~~~~~y~~Pe~~~~~~~--~~~~~~~Di~slG~~l~~~~tg~ 201 (262)
T cd06613 158 ----------RKSFIGTPYWMAPEVAAVERK--GGYDGKCDIWALGITAIELAELQ 201 (262)
T ss_pred ----------cccccCCccccCchhhccccc--CCcCchhhhHHHHHHHHHHHhCC
Confidence 111234556888887653311 23346789999999999999994
No 177
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-33 Score=250.23 Aligned_cols=194 Identities=22% Similarity=0.259 Sum_probs=163.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|.-++.||.|+||.||-|.+.. +.+.||||.+.... ...+.-..+..|+..|+.++|||++.+-|+|..+...||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~-n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccC-ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 46677889999999999999887 78999999986532 23344567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||| -|+-.|++.-. .+++.+-.+..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|-...+..++
T Consensus 106 EYC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF- 182 (948)
T KOG0577|consen 106 EYC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF- 182 (948)
T ss_pred HHH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcc-
Confidence 999 77777777544 467889999999999999999999999999999999999999999999999999777665554
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.|+..||+||.+- .+.-....-+.|+||+|++-||++.-
T Consensus 183 -------------vGTPywMAPEVIL--AMDEGqYdgkvDvWSLGITCIELAER 221 (948)
T KOG0577|consen 183 -------------VGTPYWMAPEVIL--AMDEGQYDGKVDVWSLGITCIELAER 221 (948)
T ss_pred -------------cCCccccchhHhe--eccccccCCccceeeccchhhhhhhc
Confidence 4556699999763 12222335678899999999999876
No 178
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=2.6e-31 Score=234.89 Aligned_cols=203 Identities=19% Similarity=0.232 Sum_probs=163.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+...+|.+.+.||+|+||.||++.... .++..+|+|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 456789999999999999999997532 24567899988654 344556789999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcE
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP-----------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHI 241 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~ 241 (317)
+.+++||||+++++|.+++.... ...+++..++.++.||+.||+|||+.|++||||||+|||++.++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999999999886431 2348999999999999999999999999999999999999999999
Q ss_pred EEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913 242 MLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV 314 (317)
Q Consensus 242 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~ 314 (317)
+|+|||+++........... ....+...|++||+... .....++|+|+++++++|+.. |.
T Consensus 160 kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~sDiwslG~il~~l~t~g~ 220 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVG--------GHTMLPIRWMPPESIMY-----RKFTTESDVWSLGVVLWEIFTYGK 220 (288)
T ss_pred EeccCCccccccCCceeecC--------CCCCccccccCHHHhcc-----CCCCchhhHHHHHHHHHHHHhCCC
Confidence 99999999765432211000 01122345777776532 334568999999999999997 63
No 179
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=5.3e-31 Score=230.50 Aligned_cols=203 Identities=20% Similarity=0.251 Sum_probs=161.1
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCC---ceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTS---ANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
..++|++.+.||+|+||.||+|.+.. ++ ..||+|.+.... .......+..|+.+++.++||||+++++++..+..
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 79 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKL-PGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP 79 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEec-CCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc
Confidence 34679999999999999999998875 33 369999986542 34556789999999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.++||||+++++|.+++... .+.+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 80 VMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred eEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999999998654 35689999999999999999999999999999999999999999999999999876543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
..... ..... ........|++||+.. ......+.|+|+++++++|+.. |
T Consensus 159 ~~~~~-~~~~~----~~~~~~~~y~~PE~~~-----~~~~~~~~DvwslG~~l~e~l~~g 208 (269)
T cd05065 159 DTSDP-TYTSS----LGGKIPIRWTAPEAIA-----YRKFTSASDVWSYGIVMWEVMSYG 208 (269)
T ss_pred Ccccc-ccccc----cCCCcceeecCHhHhc-----cCcccchhhhhhhHHHHHHHhcCC
Confidence 22110 00000 0000122467777654 3344568999999999999653 6
No 180
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=3.7e-31 Score=233.44 Aligned_cols=204 Identities=22% Similarity=0.304 Sum_probs=164.5
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE-----e
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE-----V 171 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-----~ 171 (317)
..++|++.+.||+|+||.||+|.+.. +++.+|+|++.... .....+.+|+.+++.+ +|+||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKK-NGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECC-CCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 45789999999999999999998877 78899999876431 2234577899999999 6999999999873 4
Q ss_pred cCEEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
+..+++||||+++++|.+++.. .....+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 4678999999999999988753 22356889999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+........ .....++..|++||+...+..........+|+|+++++++|+..| .|
T Consensus 172 ~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p 228 (286)
T cd06638 172 AQLTSTRLR----------RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPP 228 (286)
T ss_pred eecccCCCc----------cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCC
Confidence 766432211 111235667889988754433333446789999999999999988 44
No 181
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=243.51 Aligned_cols=201 Identities=22% Similarity=0.341 Sum_probs=169.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..+-|.+.+.||+|-|.+|.+|++.- +|+.||||++.+..+..-...++..|++.|+.++|||||++|++...+..+||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVF-TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVF-TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhc-ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 35678899999999999999998776 89999999999887777777789999999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeecccccCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl~DFG~a~~~~~~~ 256 (317)
|+|+-++|+|++||-+. ...+.+..+++++.||+.||.|+|+..||||||||+|+++. +-|-|||.|||++.++.+..
T Consensus 95 iLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK 173 (864)
T ss_pred EEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence 99999999999999776 46699999999999999999999999999999999999886 57899999999998887766
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.+ .+.||. ..|-+||-.-+.- | .-...|+|+++.+++=+-||.|
T Consensus 174 kL-~TsCGS----------LAYSAPEILLGDs--Y--DAPAVDiWSLGVILyMLVCGq~ 217 (864)
T KOG4717|consen 174 KL-TTSCGS----------LAYSAPEILLGDS--Y--DAPAVDIWSLGVILYMLVCGQP 217 (864)
T ss_pred hh-hcccch----------hhccCchhhhcCc--c--CCcchhhhHHHHHHHHHHhCCC
Confidence 54 333332 3455665432211 1 1245689999999999999944
No 182
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=2e-31 Score=238.81 Aligned_cols=195 Identities=20% Similarity=0.241 Sum_probs=149.9
Q ss_pred eeeecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCEEEEEEcc
Q 042913 105 VRHLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHYICFLIDY 181 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~ 181 (317)
.++||+|+||.||+|.... .+++.||+|.+..... ...+.+|+++++.++||||+++++++.. +..+|++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 3569999999999998653 2568899999865422 2346789999999999999999998853 5678999999
Q ss_pred cCCCChhcccccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeecccc
Q 042913 182 CPNGDLHSLLPKQ-------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL----REDGHIMLSDFDLCF 250 (317)
Q Consensus 182 ~~~gsL~~~l~~~-------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill----~~~~~~kl~DFG~a~ 250 (317)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 82 A-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred c-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 9 66887776432 12358999999999999999999999999999999999999 456789999999997
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.......... ......++..|++||..... .......|+|++|++++|+..|.|
T Consensus 161 ~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~el~~g~~ 214 (317)
T cd07868 161 LFNSPLKPLA-------DLDPVVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEP 214 (317)
T ss_pred ccCCCCcccc-------ccCCccccccccCCHHHcCC----CCcCchhhHHHHHHHHHHHHhCCC
Confidence 6543221100 11122445667888765431 224577899999999999999954
No 183
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=4.7e-31 Score=232.33 Aligned_cols=201 Identities=20% Similarity=0.306 Sum_probs=160.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHH-HHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEI-LSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.+.. +++.||+|.+......... ..+..|+.+ ++.++|+||+++++++..++..|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVP-TGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcC-CCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 478999999999999999999887 7999999999765433333 344445554 6777899999999999999999999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|||+ .++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++..+...
T Consensus 79 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999 47887776432 235689999999999999999999997 9999999999999999999999999998765321
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. ......++..|++||....... ......+.|+|++|++++|+..| .|
T Consensus 158 ~-----------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~p 206 (283)
T cd06617 158 V-----------AKTIDAGCKPYMAPERINPELN-QKGYDVKSDVWSLGITMIELATGRFP 206 (283)
T ss_pred c-----------ccccccCCccccChhhcCCccc-ccccCccccchhhHHHHHHHHhCCCC
Confidence 1 0111245667888987754322 12335678999999999999999 45
No 184
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=3.9e-31 Score=233.13 Aligned_cols=198 Identities=25% Similarity=0.304 Sum_probs=157.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEc---CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLR---DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHY 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 174 (317)
+.|++.+.||+|+||+||++... ..++..||+|++.... .......+.+|+++++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 34499999999999999887532 2257789999987542 23345677889999999999999999998764 346
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
++++|||+++++|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus 83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 8999999999999999854 3589999999999999999999999999999999999999999999999999987643
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....... .....+...|++||.... .....+.|+|+++++++|+..|
T Consensus 160 ~~~~~~~-------~~~~~~~~~~~~PE~~~~-----~~~~~~~Di~slG~~l~el~tg 206 (283)
T cd05080 160 GHEYYRV-------REDGDSPVFWYAVECLKE-----NKFSYASDVWSFGVTLYELLTH 206 (283)
T ss_pred cchhhcc-------CCCCCCCceeeCHhHhcc-----cCCCcccccHHHHHHHHHHHhC
Confidence 2211000 001122334677776543 2345788999999999999988
No 185
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=4.9e-31 Score=232.50 Aligned_cols=200 Identities=25% Similarity=0.326 Sum_probs=159.8
Q ss_pred cCCeEEeeeecccCCeEEEEEEEc---CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cC
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLR---DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SH 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 173 (317)
..+|++.+.||+|+||.||+|... ..+++.||+|.+... .....+.+.+|+++++.++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 358999999999999999999753 236789999998654 34555778999999999999999999998643 35
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 689999999999999998653 2458999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
........ .........|++||+... .....+.|+|+++++++|+..|
T Consensus 160 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~~ 207 (284)
T cd05081 160 QDKEYYKV-------REPGESPIFWYAPESLTE-----SKFSVASDVWSFGVVLYELFTY 207 (284)
T ss_pred CCCcceee-------cCCCCCceEeeCHHHhcc-----CCcChHHHHHHHHHHHHHHhhc
Confidence 43221100 001112224778876643 2346789999999999999876
No 186
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=2.9e-31 Score=233.16 Aligned_cols=202 Identities=18% Similarity=0.192 Sum_probs=160.3
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|.+.. ..+..||+|.+.... .......+.+|+.+++.++|+||+++++++..+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 456789999999999999999997642 235689999986432 233445688999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEe
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP--------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLS 244 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~ 244 (317)
...++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999999986431 1235678889999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|||+++........... ....+...|++||+... .....+.|+|+++++++|+..
T Consensus 162 dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~ 216 (277)
T cd05062 162 DFGMTRDIYETDYYRKG--------GKGLLPVRWMSPESLKD-----GVFTTYSDVWSFGVVLWEIAT 216 (277)
T ss_pred CCCCccccCCcceeecC--------CCCccCHhhcChhHhhc-----CCcCchhHHHHHHHHHHHHHc
Confidence 99998765432211100 01122345777776543 334678899999999999987
No 187
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=2.9e-31 Score=232.36 Aligned_cols=197 Identities=20% Similarity=0.230 Sum_probs=154.3
Q ss_pred EEeeeecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------CE
Q 042913 103 KLVRHLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------HY 174 (317)
Q Consensus 103 ~i~~~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 174 (317)
.+.+.||+|+||.||+|.+.. .+. .+|+|.+..........+.+.+|+++++.++|+||+++++++... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQ-DDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEcc-CCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 467889999999999998876 333 689999876554566678889999999999999999999976432 34
Q ss_pred EEEEEcccCCCChhcccccC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 175 ICFLIDYCPNGDLHSLLPKQ----PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
.+++|||+++++|.+++... ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 78999999999998876321 23457899999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
......... .+...+++++|..++.........+.|+|+++++++|+.. |
T Consensus 161 ~~~~~~~~~-------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g 211 (272)
T cd05075 161 KIYNGDYYR-------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG 211 (272)
T ss_pred ccCccccee-------------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence 754322110 1111233344444444444455678999999999999987 5
No 188
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=7e-32 Score=237.80 Aligned_cols=198 Identities=23% Similarity=0.303 Sum_probs=162.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||+|.+.. +|+.|++|.+............+.+|+++++.++|+||+++++++.+.+.+++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~-~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECC-CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999887 78999999997654333444567789999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|++ ++|.+++... ...+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||+++.........
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~- 156 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY- 156 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc-
Confidence 995 6888877543 3568999999999999999999999999999999999999999999999999997654322110
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....+...|++||..... .......|+|++|++++|+..| .|
T Consensus 157 ---------~~~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~il~~l~tg~~p 199 (284)
T cd07839 157 ---------SAEVVTLWYRPPDVLFGA----KLYSTSIDMWSAGCIFAELANAGRP 199 (284)
T ss_pred ---------CCCccccCCcChHHHhCC----cccCcHHHHHHHHHHHHHHHhcCCC
Confidence 112344568888876432 1224578999999999999976 65
No 189
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=4.1e-31 Score=232.01 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=162.9
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|.+.. .++..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 556799999999999999999998764 234789999986543 234446788899999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEe
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP--------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLS 244 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~ 244 (317)
...++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999999986431 2346788999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
|||+++.......... .....++..|++||...... ...+.|+|+++++++|+.. |
T Consensus 162 dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~-----~~~~~Di~slG~il~el~t~g 218 (277)
T cd05032 162 DFGMTRDIYETDYYRK--------GGKGLLPVRWMAPESLKDGV-----FTTKSDVWSFGVVLWEMATLA 218 (277)
T ss_pred CcccchhhccCccccc--------CCCCCccccccCHHHHhcCC-----CCcccchHHHHHHHHHhhccC
Confidence 9999876543221100 01112334688888764332 3456899999999999986 6
No 190
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=233.48 Aligned_cols=201 Identities=22% Similarity=0.252 Sum_probs=166.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEcccCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+.||+|+|+.|--|.... ++..+|||++.+. ......++.+|++++..++ |+||++++++|+++..+|||||-|.|
T Consensus 84 e~LGeGAyasVqtcv~i~-t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQ-TGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeec-cchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 459999999999998777 8999999999876 4455678899999999997 99999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeecccccCCCCCCeeec
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
|+|...|.++ .-|++.++.++..+|+.||.|||.+||.||||||+|||..... -||||||.++-.........
T Consensus 161 GplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s-- 236 (463)
T KOG0607|consen 161 GPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS-- 236 (463)
T ss_pred chHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC--
Confidence 9999999664 6799999999999999999999999999999999999997654 48999999985543333221
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..+.+.-.-..|...||+||...--+-+-.-...++|.||++.+++=+..|-
T Consensus 237 -pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY 288 (463)
T KOG0607|consen 237 -PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY 288 (463)
T ss_pred -CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence 2222344444566678888877655556556689999999999999888883
No 191
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=3.3e-31 Score=231.84 Aligned_cols=199 Identities=23% Similarity=0.278 Sum_probs=158.2
Q ss_pred eEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE-----
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY----- 174 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 174 (317)
|++.+.||+|+||.||+|..... .+..||+|.+............+.+|+++++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999987542 34789999997665555667789999999999999999999998765443
Q ss_pred -EEEEEcccCCCChhcccccC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 175 -ICFLIDYCPNGDLHSLLPKQ----PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 175 -~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
.+++|||+++++|..++... ....+++..++.++.|++.||.|||+.+++||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 79999999999999887442 2246899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
+............ .......|++||+... .....+.|+|+++++++|+.. |
T Consensus 161 ~~~~~~~~~~~~~--------~~~~~~~~~~pe~~~~-----~~~~~~~Dv~SlG~il~el~~~g 212 (273)
T cd05035 161 KKIYSGDYYRQGR--------IAKMPVKWIAIESLAD-----RVYTSKSDVWAFGVTMWEIATRG 212 (273)
T ss_pred eeccccccccccc--------cccCCccccCHhhccc-----CCCCcccchHHHHHHHHHHHhCC
Confidence 7654332211000 1112235677776543 334578999999999999986 5
No 192
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=7.7e-31 Score=231.40 Aligned_cols=200 Identities=22% Similarity=0.306 Sum_probs=160.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEc---CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLR---DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HY 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 174 (317)
+-|++++.||+|+||.||+|... ..++..||+|.+.... .......+.+|+++++.++|+||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 45789999999999999999753 2367899999986542 344556789999999999999999999988765 57
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.++||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||+++.+..
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 89999999999999998654 24589999999999999999999999999999999999999999999999999987654
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....... .....+...|++||+.... ....+.|+|++|++++|+..|
T Consensus 162 ~~~~~~~-------~~~~~~~~~y~apE~~~~~-----~~~~~~Di~slG~il~ellt~ 208 (284)
T cd05079 162 DKEYYTV-------KDDLDSPVFWYAPECLIQS-----KFYIASDVWSFGVTLYELLTY 208 (284)
T ss_pred Cccceee-------cCCCCCCccccCHHHhccC-----CCCccccchhhhhhhhhhhcC
Confidence 3321110 0011233457888876432 234678999999999999765
No 193
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=4.6e-31 Score=232.14 Aligned_cols=200 Identities=20% Similarity=0.270 Sum_probs=160.4
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|.+.. ++. .||+|++.... .......+.+|+.+++.+.|+||+++++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIP-DGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEec-CCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 556889999999999999999998765 344 48999986543 33445678899999999999999999998875
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
...++++||+++|+|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4578999999999999998654 356899999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.......... .......|++||..... ....++|+|+++++++|+.. |
T Consensus 160 ~~~~~~~~~~--------~~~~~~~y~~PE~~~~~-----~~~~~~Di~slG~~l~el~t~g 208 (279)
T cd05109 160 DIDETEYHAD--------GGKVPIKWMALESILHR-----RFTHQSDVWSYGVTVWELMTFG 208 (279)
T ss_pred ccccceeecC--------CCccchhhCCHHHhccC-----CCCchhHHHHHHHHHHHHHcCC
Confidence 5433211110 01223457888876432 24567899999999999765 6
No 194
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=3.2e-31 Score=230.65 Aligned_cols=198 Identities=23% Similarity=0.277 Sum_probs=162.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|.+.+.||+|+||.||+|.+.. +..+++|.+..... ....+.+|+.+++.++|+||+++++++......+
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~--~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNG--TTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcC--CceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 567899999999999999999998764 57899999875433 2356788999999999999999999999889999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+++++|.+++.......+++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||+++......
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 99999999999999977655678999999999999999999999999999999999999999999999999997654311
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.. ..........|.+||+... .....++|+|+++++++|+.. |
T Consensus 158 ~~---------~~~~~~~~~~y~~PE~~~~-----~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 158 YT---------AREGAKFPIKWTAPEAANY-----GRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred hh---------hhhccCCCccccCHHHhcc-----CCcCchhHHHHHHHHHHHHHhCC
Confidence 00 0001112235677776543 234467899999999999986 6
No 195
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=3.5e-31 Score=230.93 Aligned_cols=197 Identities=21% Similarity=0.279 Sum_probs=159.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.++||+|+||.||+|.+.. ...||+|++...... .+.+.+|+++++.++|+||+++++.+. ....+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecC--CceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 445789999999999999999998765 356999998754322 246788999999999999999999875 45689
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+++++|.+++.......+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||+++......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999976545568999999999999999999999999999999999999999999999999997664332
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.... ....+...|++||+.. ......+.|+|+++++++|+.. |
T Consensus 157 ~~~~---------~~~~~~~~y~~PE~~~-----~~~~~~~~DvwslG~~l~ellt~g 200 (262)
T cd05071 157 YTAR---------QGAKFPIKWTAPEAAL-----YGRFTIKSDVWSFGILLTELTTKG 200 (262)
T ss_pred cccc---------cCCcccceecCHhHhc-----cCCCCchhhHHHHHHHHHHHHcCC
Confidence 1100 0112233577777553 3334678899999999999987 5
No 196
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=1.2e-31 Score=233.30 Aligned_cols=198 Identities=23% Similarity=0.293 Sum_probs=164.5
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|++++.||.|+||.||+|.+.. +..+++|++... .......+.+|+.+++.++|+||+++++++......++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN--RVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC--CCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 4578999999999999999998876 789999998765 233456788899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.......+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999766432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.. .......|.+||..... .....+|+|+++++++|+.. | .|
T Consensus 161 ~~----------~~~~~~~~~~PE~~~~~-----~~~~~~DiwslG~~l~~l~~~g~~p 204 (261)
T cd05148 161 SS----------DKKIPYKWTAPEAASHG-----TFSTKSDVWSFGILLYEMFTYGQVP 204 (261)
T ss_pred cc----------CCCCceEecCHHHHccC-----CCCchhhHHHHHHHHHHHHcCCCCC
Confidence 00 11223457777765432 23467899999999999986 5 44
No 197
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=4.5e-31 Score=232.68 Aligned_cols=198 Identities=20% Similarity=0.228 Sum_probs=162.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++|+||+++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRE-TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECC-CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999876 7899999998654323333456788999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||++++.|..++.. ...+++..++.++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 80 EYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY 157 (286)
T ss_pred eccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence 99998888877644 3568999999999999999999999999999999999999999999999999998764432110
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....+...|++||+...+ .......|+|+++++++|+..|-
T Consensus 158 ----------~~~~~~~~~~aPE~~~~~----~~~~~~~Di~slG~i~~~l~~g~ 198 (286)
T cd07847 158 ----------TDYVATRWYRAPELLVGD----TQYGPPVDVWAIGCVFAELLTGQ 198 (286)
T ss_pred ----------cCcccccccCCHHHHhCC----CCcCchhhhHHHHHHHHHHHhCC
Confidence 011234567888875432 12346789999999999999993
No 198
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=3.3e-31 Score=230.64 Aligned_cols=197 Identities=22% Similarity=0.294 Sum_probs=161.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|+++++||+|+||.||+|.... ++.||+|.+...... ...+.+|+.+++.++|+||+++++++. .+..+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~--~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNG--HTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCC--CceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 556789999999999999999998664 788999998754332 356788999999999999999999874 56789
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
++|||+.+++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 99999999999999876656678999999999999999999999999999999999999999999999999997665322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.... ....+...|.+||+... .......|+|+++++++|+.. |
T Consensus 157 ~~~~---------~~~~~~~~y~~pe~~~~-----~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 157 YTAR---------EGAKFPIKWTAPEAINY-----GTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred cccc---------cCCcccccccCHHHhcc-----CCcCcccchHHHHHHHHHHHhCC
Confidence 1100 01122345777776543 334577999999999999987 6
No 199
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=2.4e-31 Score=231.09 Aligned_cols=195 Identities=24% Similarity=0.297 Sum_probs=158.4
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|++.+.||+|+||.||++.+.. +..+|+|++...... ...+.+|+++++.++|+||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~--~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRG--KIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecC--CccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 4578899999999999999998763 678999998654322 24577899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999999999986543 46899999999999999999999999999999999999999999999999998765322111
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
...+ ......|++||+.... ....++|+|+++++++|+.. |
T Consensus 157 --~~~~-------~~~~~~y~~Pe~~~~~-----~~~~~~Di~slG~il~~l~~~g 198 (256)
T cd05059 157 --SSQG-------TKFPVKWAPPEVFDYS-----RFSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred --ccCC-------CCCCccccCHHHhccC-----CCCchhhHHHHHHHHHHHhccC
Confidence 0000 0112357888876532 23467899999999999987 5
No 200
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=7.7e-31 Score=232.93 Aligned_cols=195 Identities=19% Similarity=0.263 Sum_probs=163.2
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|++.+.||+|+||.||+|.+.. +++.|++|.+..... .....+.+|+.+++.+.|+||+++++.+..+...|+|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECC-CCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 4799999999999999999998766 788999999876532 2346688899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++.........
T Consensus 96 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 96 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred ecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 999999999999854 45789999999999999999999999999999999999999999999999998765432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|++||+... .....+.|+|+++++++|+..|.
T Consensus 173 ----------~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~~l~~g~ 213 (296)
T cd06654 173 ----------RSTMVGTPYWMAPEVVTR-----KAYGPKVDIWSLGIMAIEMIEGE 213 (296)
T ss_pred ----------cCcccCCccccCHHHHcC-----CCCCccchHHHHHHHHHHHHhCC
Confidence 011234456777776643 23356899999999999999993
No 201
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=9.4e-31 Score=227.85 Aligned_cols=198 Identities=20% Similarity=0.268 Sum_probs=162.3
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
.+..++|++.+.||+|+||.||++.+.. +..+++|.+... ....+.+.+|+++++.++|+||+++++.+.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~--~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecC--CccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 3567899999999999999999998654 567999988653 2334678889999999999999999999877 778
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
+++|||+++++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++..+...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999997655567888999999999999999999999999999999999999999999999999765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.... .....+...|.+||+.... ....+.|+|+++++++|+.. |
T Consensus 156 ~~~~---------~~~~~~~~~y~~PE~~~~~-----~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 156 EYTA---------REGAKFPIKWTAPEAINFG-----SFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred Cccc---------ccCCcccccccCHhHhccC-----CcCccccchHHHHHHHHHHhcC
Confidence 2110 0111234557888876432 33557899999999999997 6
No 202
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=2.3e-31 Score=233.98 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=162.6
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..++|.+.+.||+|+||.||+|.+.. ..++.||+|++.... ..+....+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 45778999999999999999998753 245789999987543 2334578899999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcE
Q 042913 174 YICFLIDYCPNGDLHSLLPKQP------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHI 241 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~ 241 (317)
..++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999986431 2457888999999999999999999999999999999999999999
Q ss_pred EEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 242 MLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 242 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
+|+|||+++.......... .........|++||+.. ......++|+|+++++++|+.. | .|
T Consensus 162 kl~d~g~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~e~~~~g~~p 224 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRV--------GGHTMLPIRWMPPESIM-----YRKFTTESDVWSFGVVLWEIFTYGKQP 224 (280)
T ss_pred EECCcccceecccCcceec--------CCCCcccceecChhhhc-----cCCcchhhhHHHHHHHHHHHHhcCCCC
Confidence 9999999875432211100 00111223466776553 3344567999999999999986 7 44
No 203
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=9.8e-31 Score=231.61 Aligned_cols=204 Identities=21% Similarity=0.289 Sum_probs=163.9
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHL 169 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~ 169 (317)
..+..++|++.+.||+|+||.||++.... .....+|+|.+.... .......+.+|+++++.+ +|+||+++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 35667889999999999999999998764 134689999987543 334456788999999999 799999999999
Q ss_pred EecCEEEEEEcccCCCChhcccccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE
Q 042913 170 EVSHYICFLIDYCPNGDLHSLLPKQ--------------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL 235 (317)
Q Consensus 170 ~~~~~~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill 235 (317)
..++.++++|||+++++|.+++... ....+++..++.++.||+.||.|||+.+|+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 9999999999999999999998542 24568899999999999999999999999999999999999
Q ss_pred ccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 236 REDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 236 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
+.++.+||+|||+++............. ......|++||+.... .....+|+|+++++++|+..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~el~~ 229 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTN--------GRLPVKWMAPEALFDR-----VYTHQSDVWSFGVLLWEIFT 229 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCC--------CCCCccccCHHHhccC-----CcCcccceeehhhHHHHHhc
Confidence 9999999999999987654322111100 1123457888865432 23567899999999999875
No 204
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=1.7e-31 Score=241.45 Aligned_cols=203 Identities=21% Similarity=0.283 Sum_probs=160.4
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV 171 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 171 (317)
+..++|++.+.||+|+||.||+|.... .+++.||+|++.... .......+..|+++++++ +|+||+++++++..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 445689999999999999999996533 245789999986542 334456778899999999 79999999998764
Q ss_pred -cCEEEEEEcccCCCChhcccccCC-------------------------------------------------------
Q 042913 172 -SHYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------- 195 (317)
Q Consensus 172 -~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 195 (317)
+..++++|||+++++|.+++....
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 467899999999999998875321
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccccccccc
Q 042913 196 ----NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRR 271 (317)
Q Consensus 196 ----~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+......... ..
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~--------~~ 234 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK--------GD 234 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhc--------cC
Confidence 125788999999999999999999999999999999999999999999999999876433221110 01
Q ss_pred ccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 272 RKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 272 ~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
..+...|++||+... .....++|+|+++++++|+.. |
T Consensus 235 ~~~~~~y~aPE~~~~-----~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 235 ARLPLKWMAPESIFD-----KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred CCCCccccCcHHhcC-----CCCCccccHHHHHHHHHHHHHcC
Confidence 123345888887643 345578999999999999875 7
No 205
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=2.6e-31 Score=234.50 Aligned_cols=189 Identities=14% Similarity=0.153 Sum_probs=156.5
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEe----cCEEEEEEc
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEV----SHYICFLID 180 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e 180 (317)
..||+|++|.||+|.+. ++.||+|.+....... ...+.+.+|+.+|++++||||+++++++.+ ...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN---NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEEC---CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 46899999999999874 6899999997653322 335778899999999999999999999876 457899999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|+++|+|.+++.. ...+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.......
T Consensus 103 y~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-- 178 (283)
T PHA02988 103 YCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-- 178 (283)
T ss_pred eCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc--
Confidence 9999999999965 36789999999999999999999984 999999999999999999999999999976533211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...++..|++||...... .....++|+||+|++++|+..| .|
T Consensus 179 -----------~~~~~~~y~aPE~~~~~~---~~~~~k~Di~SlGvil~el~~g~~P 221 (283)
T PHA02988 179 -----------KNVNFMVYFSYKMLNDIF---SEYTIKDDIYSLGVVLWEIFTGKIP 221 (283)
T ss_pred -----------cccCcccccCHHHhhhcc---ccccchhhhhHHHHHHHHHHHCCCC
Confidence 123455788888775422 2345789999999999999999 55
No 206
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=6.4e-31 Score=227.92 Aligned_cols=196 Identities=19% Similarity=0.281 Sum_probs=164.8
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||+|.... +++.+|+|.+............+.+|+++++.++|+||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKA-DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcC-CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999998877 78999999998765555667889999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeecccccCCCCCCee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|+++++|.+++.......+++..++.++.|++.+|.|||++|++|+||||+||+++.+ +.++|+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~- 158 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKA- 158 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccc-
Confidence 9999999999976555668999999999999999999999999999999999999854 46899999999765432210
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....+...|++||... ........|+|+++++++|+..|
T Consensus 159 ----------~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 159 ----------YTVVGTPCYISPELCE-----GKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred ----------cccccCCcccCchhcc-----CCCCCcccchHHHHHHHHHHHhC
Confidence 0113344677777654 23345678999999999999887
No 207
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=4.6e-31 Score=235.53 Aligned_cols=203 Identities=21% Similarity=0.279 Sum_probs=162.0
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCC------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC------TSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAH 168 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 168 (317)
.+..++|.+.+.||+|+||.||++.+... ....+|+|.+.... .......+.+|+++++.+ +|+||++++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 45568899999999999999999976431 23579999987542 344556788899999999 79999999999
Q ss_pred EEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913 169 LEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL 234 (317)
Q Consensus 169 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil 234 (317)
+...+..|+||||+++++|.+++.... ...+++..++.++.||+.||+|||+.|++||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999986532 235788999999999999999999999999999999999
Q ss_pred EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
++.++.+||+|||+++..........+.. ......|++||..... ....++|+|+++++++|+..
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~el~~ 237 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTN--------GRLPVKWMAPEALFDR-----IYTHQSDVWSFGVLLWEIFT 237 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhcccc--------CCCccceeChHHhccC-----CCCcHHHHHHHHHHHHHHHc
Confidence 99999999999999876543221111111 1122457888866432 23577999999999999976
No 208
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=5.8e-31 Score=233.83 Aligned_cols=196 Identities=19% Similarity=0.261 Sum_probs=163.3
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.++|++++.||+|+||.||++.... +++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++..++..|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIA-TGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECC-CCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 3899999999999999999998776 789999999875432 2345678899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.+ ..+++..+..++.|++.+|.|||+.|++||||||+|||++.++.++|+|||++.........
T Consensus 95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred ecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 999999999999854 45789999999999999999999999999999999999999999999999998765432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ....+...|.+||+... .......|+|+++++++|+..|.+
T Consensus 172 ~----------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slGvil~~l~tg~~ 213 (297)
T cd06656 172 R----------STMVGTPYWMAPEVVTR-----KAYGPKVDIWSLGIMAIEMVEGEP 213 (297)
T ss_pred c----------CcccCCccccCHHHHcC-----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0 11134445777776543 233568999999999999999843
No 209
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=8.8e-31 Score=228.31 Aligned_cols=204 Identities=21% Similarity=0.304 Sum_probs=169.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||.|+||.||+|.... ++..+++|++....... ....+.+|+++++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLP-NNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcC-CCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 479999999999999999998776 78899999987654333 5678899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 180 DYCPNGDLHSLLPKQPN-NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|++++++|.+++..... ..+++..++.++.||+.||.|||+.|++|+||||+||++++++.++|+|||++..+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999965422 56899999999999999999999999999999999999999999999999998766543221
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. ........+...|++||+.... .....+.|+|+++++++|+..| .|
T Consensus 159 ~------~~~~~~~~~~~~y~~Pe~~~~~----~~~~~~~Dv~slG~i~~~l~~g~~p 206 (267)
T cd06610 159 T------RKVRKTFVGTPCWMAPEVMEQV----HGYDFKADIWSFGITAIELATGAAP 206 (267)
T ss_pred c------ccccccccCChhhcChHHHccc----cCcCcccchHhHhHHHHHHHhCCCC
Confidence 1 0111222355678888876543 2346778999999999999999 44
No 210
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=5.9e-31 Score=234.38 Aligned_cols=207 Identities=19% Similarity=0.239 Sum_probs=165.5
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHL 169 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~ 169 (317)
..+..++|.+.+.||+|+||.||++.+. ..++..||+|.+.... .....+.+.+|+++++++ +|+||+++++++
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3456678999999999999999999753 2245689999886542 234456789999999999 799999999999
Q ss_pred EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 170 EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
...+..|+||||+.+++|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997654445899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
+.......... . ........|++||+.... ....+.|+|+++++++|+.. | .|
T Consensus 189 ~~~~~~~~~~~--~------~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 189 RDIMNDSNYVV--K------GNARLPVKWMAPESIFNC-----VYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred ccccCCCceee--c------CCCCcccccCCHhhhccC-----CCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 76543321110 0 001223457777765432 34568999999999999875 6 44
No 211
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=5.5e-31 Score=232.37 Aligned_cols=200 Identities=21% Similarity=0.258 Sum_probs=166.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.+.. +++.|++|+++...........+.+|+++++.++|+||+++++++..++.+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKA-TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCC-CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 479999999999999999998887 7889999998765444555678899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||++++.|..+... ...+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.+||+|||++..........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 80 EYVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 99987666665533 3558999999999999999999999999999999999999999999999999997765433200
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....+...|++||+..... ....+.|+|+++++++|+..|.|
T Consensus 158 ---------~~~~~~~~~~~~PE~~~~~~----~~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 158 ---------LTDYVATRWYRAPELLVGDT----NYGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred ---------ccCcccccCCcCCchhcCCC----CcCchhhHHHHHHHHHHHHhCCC
Confidence 01113455688888875431 34578999999999999999854
No 212
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=8.4e-31 Score=227.39 Aligned_cols=198 Identities=21% Similarity=0.311 Sum_probs=167.1
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||++.... +++.|++|.+............+.+|+.+++.++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKE-DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcC-CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999998877 78999999997654455556788999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+.+++|.+++.......+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-- 157 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL-- 157 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh--
Confidence 999999999987654556899999999999999999999999999999999999999999999999999765432211
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|.+||+.... ....+.|+|++|++++|+..|-
T Consensus 158 --------~~~~~~~~~~~~pe~~~~~-----~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 158 --------ARTCIGTPYYLSPEICENR-----PYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred --------hhhccCCccccCHHHhCCC-----CCCCccchhHHHHHHHHHHcCC
Confidence 0112345567788776432 3346789999999999999983
No 213
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=5.5e-31 Score=228.95 Aligned_cols=192 Identities=19% Similarity=0.269 Sum_probs=154.3
Q ss_pred eecccCCeEEEEEEEc-CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 107 HLGTGNLGRVFLCHLR-DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
+||+|+||.||+|.+. ..++..+|+|++..........+.+.+|+.+++.++|+||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999754 225789999998766545566678999999999999999999999876 45678999999999
Q ss_pred ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccc
Q 042913 186 DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGS 265 (317)
Q Consensus 186 sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 265 (317)
+|.+++.. ...+++..+..++.|++.||+|||++||+||||||.||+++.++.+||+|||+++.............
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-- 156 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT-- 156 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC--
Confidence 99999854 35689999999999999999999999999999999999999999999999999976644332211100
Q ss_pred ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 266 ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
...+...|++||... ......+.|+|++++.++|+.. |
T Consensus 157 -----~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~t~g 195 (257)
T cd05116 157 -----HGKWPVKWYAPECMN-----YYKFSSKSDVWSFGVLMWEAFSYG 195 (257)
T ss_pred -----CCCCCccccCHhHhc-----cCCcCchhHHHHHHHHHHHHHhCC
Confidence 001123566676543 2345678999999999999986 7
No 214
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=5e-31 Score=234.07 Aligned_cols=198 Identities=20% Similarity=0.222 Sum_probs=163.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc---HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS---AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
+|++.+.||+|+||.||+|.+.. +++.|++|.+...... ......+.+|+++++.++|+||+++++++...+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKE-TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECC-CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence 48889999999999999999876 6899999999765433 2334567789999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.......
T Consensus 80 v~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred EEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 99999 999999996542 3789999999999999999999999999999999999999999999999999987644221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. .........|.+||..... .......|+|++|++++|+..|.|
T Consensus 158 ~----------~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~il~e~~~g~~ 201 (298)
T cd07841 158 K----------MTHQVVTRWYRAPELLFGA----RHYGVGVDMWSVGCIFAELLLRVP 201 (298)
T ss_pred c----------ccccccceeeeCHHHHhCC----CCCCcHHHHHHHHHHHHHHHcCCc
Confidence 1 1111234457777765321 123567899999999999999965
No 215
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=7.4e-31 Score=232.24 Aligned_cols=198 Identities=22% Similarity=0.259 Sum_probs=159.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.... +++.|++|++..... ......+.+|+++++.++|+||+++++++..++..|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRI-NGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcC-CCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 689999999999999999998876 688999999865432 222235678999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+ .++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||+++........
T Consensus 83 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~- 159 (291)
T cd07870 83 EYM-HTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT- 159 (291)
T ss_pred ecc-cCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC-
Confidence 999 57777766443 245788889999999999999999999999999999999999999999999998754322111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....++..|++||+.... .....+.|+|++|++++|+..|-+
T Consensus 160 ---------~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~ 202 (291)
T cd07870 160 ---------YSSEVVTLWYRPPDVLLGA----TDYSSALDIWGAGCIFIEMLQGQP 202 (291)
T ss_pred ---------CCCccccccccCCceeecC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0111345568888876421 123457899999999999999943
No 216
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=8.9e-31 Score=231.85 Aligned_cols=204 Identities=20% Similarity=0.250 Sum_probs=162.3
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|.+.+.||+|+||.||+|.... .++..+++|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 456789999999999999999997542 23556888988654 334446788999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED 238 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~ 238 (317)
...++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999986431 2347899999999999999999999999999999999999999
Q ss_pred CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
+.++|+|||+++.......... .....+...|++||+... .....+.|+|+++++++|+.+ | .|
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRV--------GGHTMLPIRWMPPESIMY-----RKFTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred CcEEECCCCcccccCCCceeec--------CCCCCcceeecChHHhcc-----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999976543221100 001122345777776543 234467999999999999987 7 44
No 217
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=7.6e-31 Score=233.00 Aligned_cols=198 Identities=24% Similarity=0.339 Sum_probs=157.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCC--ceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTS--ANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 176 (317)
++|++.+.||+|+||.||+|.... ++ ..+++|.+... ......+.+.+|++++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK-DGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC-CCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 689999999999999999998765 33 34788877632 2334456788999999999 6999999999999999999
Q ss_pred EEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEE
Q 042913 177 FLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIM 242 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~k 242 (317)
+||||+++++|.+++.... ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999985431 13578899999999999999999999999999999999999999999
Q ss_pred EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
|+|||++....... ... ....+..|++||+.... ....++|+|+++++++|+.. | .|
T Consensus 160 l~dfg~~~~~~~~~---~~~--------~~~~~~~y~aPE~~~~~-----~~~~~~DvwSlG~il~el~t~g~~p 218 (297)
T cd05089 160 IADFGLSRGEEVYV---KKT--------MGRLPVRWMAIESLNYS-----VYTTKSDVWSFGVLLWEIVSLGGTP 218 (297)
T ss_pred ECCcCCCcccccee---ccC--------CCCcCccccCchhhccC-----CCCchhhHHHHHHHHHHHHcCCCCC
Confidence 99999986432110 000 01123458888876432 23568999999999999985 6 55
No 218
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=2.7e-31 Score=231.93 Aligned_cols=200 Identities=20% Similarity=0.256 Sum_probs=165.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||++.... +++.++||.+.... ........+.+|+.+++.++|+||+++++++..++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLL-DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecC-CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 578899999999999999998876 78999999886532 2334556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
|||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 9999999999988632 23568999999999999999999999999999999999999999999999999987654332
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.... ...+...|++||+.... ......|+|+++++++|+..| .|
T Consensus 161 ~~~~----------~~~~~~~~~ape~~~~~-----~~~~~~Dv~slG~il~~l~~g~~p 205 (267)
T cd08229 161 TAAH----------SLVGTPYYMSPERIHEN-----GYNFKSDIWSLGCLLYEMAALQSP 205 (267)
T ss_pred cccc----------cccCCcCccCHHHhcCC-----CccchhhHHHHHHHHHHHHhCCCC
Confidence 2111 11344568888876433 234678999999999999988 55
No 219
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-31 Score=227.41 Aligned_cols=202 Identities=21% Similarity=0.287 Sum_probs=169.6
Q ss_pred cCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--C----Ccce
Q 042913 91 LSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--P----FLPT 164 (317)
Q Consensus 91 ~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~----~iv~ 164 (317)
.+..+++..++|.++..+|+|.||+|-+|.+++ ++..||||+++.- ....+..+.|+++|+++.+ | -+|+
T Consensus 80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~-~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRE-TKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred EEEeccccccceehhhhhcCCcccceEEEeecC-CCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 455667778999999999999999999999998 5899999998653 4566777889999999942 2 2678
Q ss_pred EEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------
Q 042913 165 LYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE------- 237 (317)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~------- 237 (317)
+.++|+..++.|+|+|.+ |-++++++.++...+++...++.|+.|++.++++||+.+++|-||||+|||+..
T Consensus 156 m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~ 234 (415)
T KOG0671|consen 156 MRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTY 234 (415)
T ss_pred eehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEe
Confidence 889999999999999999 889999999988899999999999999999999999999999999999999831
Q ss_pred -------------CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCc
Q 042913 238 -------------DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPA 304 (317)
Q Consensus 238 -------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~ 304 (317)
+..|+|+|||-|......... ...+..|-+||. .-...+...+|+||+|
T Consensus 235 ~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~-------------iVsTRHYRAPEV-----iLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 235 NPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHST-------------IVSTRHYRAPEV-----ILGLGWSQPCDVWSIG 296 (415)
T ss_pred ccCCccceeccCCCcceEEEecCCcceeccCcce-------------eeeccccCCchh-----eeccCcCCccCceeee
Confidence 225899999999765544321 244556667664 4556778899999999
Q ss_pred ccccccCCCCC
Q 042913 305 QYSVEQPGGVP 315 (317)
Q Consensus 305 ~~~~e~~~G~p 315 (317)
|+++|++.|.-
T Consensus 297 CIL~ElytG~~ 307 (415)
T KOG0671|consen 297 CILVELYTGET 307 (415)
T ss_pred eEEEEeeccce
Confidence 99999999953
No 220
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3.5e-31 Score=244.02 Aligned_cols=209 Identities=20% Similarity=0.230 Sum_probs=162.9
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEE
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAH 168 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~ 168 (317)
...+..++|.+.+.||+|+||.||+|.++. ..++.||+|++.... .....+.+.+|++++..+. ||||++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 345667789999999999999999998643 245689999997643 2334457889999999997 9999999999
Q ss_pred EEecCEEEEEEcccCCCChhcccccCCC----------------------------------------------------
Q 042913 169 LEVSHYICFLIDYCPNGDLHSLLPKQPN---------------------------------------------------- 196 (317)
Q Consensus 169 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------- 196 (317)
+...+..++||||+++|+|.+++.....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999998854311
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042913 197 --------------------------------------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPEN 232 (317)
Q Consensus 197 --------------------------------------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~N 232 (317)
..+++..++.++.||+.||.|||+.+|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 235677788999999999999999999999999999
Q ss_pred EEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 233 ILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 233 ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
||++.++.+||+|||+++.+........ .....++..|++||.... .....+.|+|+++++++|+..
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYIS--------KGSTFLPLKWMAPESIFN-----NLYTTLSDVWSFGILLWEIFT 336 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccccc--------CCCcCCCCceeChHHhcC-----CCCCcHhHHHHHHHHHHHHHH
Confidence 9999999999999999976533221100 000122345666665532 334678999999999999875
Q ss_pred -C-CCC
Q 042913 313 -G-VPR 316 (317)
Q Consensus 313 -G-~p~ 316 (317)
| .|.
T Consensus 337 ~g~~P~ 342 (401)
T cd05107 337 LGGTPY 342 (401)
T ss_pred cCCCCC
Confidence 4 553
No 221
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=3.9e-31 Score=231.35 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=154.0
Q ss_pred eecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 107 HLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
+||+|+||.||+|.... .....+++|.+.... .......+.+|+++++.++|+||+++++.+.....+|+||||++++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997543 134578888775432 3444567888999999999999999999999999999999999999
Q ss_pred ChhcccccCCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecc
Q 042913 186 DLHSLLPKQPN---NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 186 sL~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
+|.+++..... ...++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~- 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK- 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc-
Confidence 99999865422 23467888999999999999999999999999999999999999999999998654322211110
Q ss_pred cccccccccccccCCCCCccccccccc--ceeccchhhhccCCcccccccCC-C-CC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVM--EFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
........|++||+...... .......+.|+|+++++++|+.. | .|
T Consensus 160 -------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 209 (269)
T cd05042 160 -------DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQP 209 (269)
T ss_pred -------CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCC
Confidence 11123345788887643221 12344678999999999999886 4 44
No 222
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=7.3e-31 Score=228.95 Aligned_cols=198 Identities=19% Similarity=0.222 Sum_probs=164.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
++|++.+.||+|+||.||+|.... +++.||+|.++... ........+.+|+++++.++|+||+++++.+...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLL-DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcC-CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 589999999999999999999886 78999999986432 2334467889999999999999999999999999999999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
|||+++++|.+++... ....+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 9999999999988542 23558999999999999999999999999999999999999999999999999987654322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.... ...+...|.+||+... .......|+|+++++++|+..|
T Consensus 161 ~~~~----------~~~~~~~y~apE~~~~-----~~~~~~~Di~slG~il~~l~~g 202 (267)
T cd08224 161 TAAH----------SLVGTPYYMSPERIHE-----NGYNFKSDIWSLGCLLYEMAAL 202 (267)
T ss_pred cccc----------eecCCccccCHHHhcc-----CCCCchhcHHHHHHHHHHHHHC
Confidence 1111 1123445777776542 3345678999999999999888
No 223
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=3.5e-31 Score=230.11 Aligned_cols=196 Identities=30% Similarity=0.495 Sum_probs=166.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+|++.+.||.|+||.||+|.+.. ++..|++|++....... ...+.+.+|+++++.++||||+++++.+......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRD-TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEcc-CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 58999999999999999999876 78999999997654332 55678999999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+.+++|.+++... ..+++..+..++.||+.||.|||+++++|+||||+||++++++.++|+|||++.........
T Consensus 80 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~- 156 (258)
T cd05578 80 DLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT- 156 (258)
T ss_pred eCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc-
Confidence 999999999999653 57899999999999999999999999999999999999999999999999998765432210
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....+...|.+||...... .....|+|+++++++|+..| .|
T Consensus 157 ----------~~~~~~~~y~~PE~~~~~~-----~~~~~Di~slG~~l~~l~~g~~p 198 (258)
T cd05578 157 ----------TSTSGTPGYMAPEVLCRQG-----YSVAVDWWSLGVTAYECLRGKRP 198 (258)
T ss_pred ----------cccCCChhhcCHHHHcccC-----CCCcccchhhHHHHHHHHhCCCC
Confidence 1123445577777665433 55789999999999999988 44
No 224
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=7.4e-31 Score=232.16 Aligned_cols=198 Identities=23% Similarity=0.276 Sum_probs=160.1
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.++|++.+.||+|++|.||+|.... +++.||+|.+...... .....+.+|+++++.++|+||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKL-TGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcC-CCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 5789999999999999999998876 7889999998654321 2223466899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+. ++|.+++.... ..+++..++.++.||+.||.|||+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 99996 58998886543 46899999999999999999999999999999999999999999999999998754321110
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
. ....+...|.+||..... .....+.|+|++|++++|+..|.
T Consensus 160 ~----------~~~~~~~~~~aPE~~~~~----~~~~~~~Dv~slG~il~~l~~g~ 201 (291)
T cd07844 160 Y----------SNEVVTLWYRPPDVLLGS----TEYSTSLDMWGVGCIFYEMATGR 201 (291)
T ss_pred c----------cccccccccCCcHHhhcC----cccCcHHHHHHHHHHHHHHHhCC
Confidence 0 001234457777765432 12346789999999999999994
No 225
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=4.3e-31 Score=230.65 Aligned_cols=200 Identities=19% Similarity=0.239 Sum_probs=163.4
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh----cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL----SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+|+..+.||+|+||.||++.+.. +++.||+|++..... .......+.+|+++++.++|+||+++++++...+.++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVK-TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcC-CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence 47788899999999999998866 789999999865321 1234578899999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~ 255 (317)
+||||+++++|.+++.+. ..+++..++.++.||+.||.|||++|++|+||||+||+++.++ .++|+|||++......
T Consensus 80 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999999653 5789999999999999999999999999999999999998776 6999999999776443
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.... ........+...|++||..... ....+.|+|+++++++|+..|.
T Consensus 158 ~~~~------~~~~~~~~~~~~~~~PE~~~~~-----~~~~~~Dv~slG~~l~~l~~g~ 205 (268)
T cd06630 158 GTGA------GEFQGQLLGTIAFMAPEVLRGE-----QYGRSCDVWSVGCVIIEMATAK 205 (268)
T ss_pred cccC------CccccccccccceeCHhHhccC-----CCCcccchHHHHHHHHHHHhCC
Confidence 1110 0111122355678888876432 3356789999999999999993
No 226
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=6.3e-31 Score=227.75 Aligned_cols=191 Identities=20% Similarity=0.278 Sum_probs=155.5
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
.||+|+||.||+|.+.. +++.||+|.+.... ..+....+.+|+++++.++|+||+++++++......|+||||+++++
T Consensus 2 ~lg~g~~g~vy~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA-DNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred ccCcccCccEEEEEEec-CCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 59999999999999876 78899999886442 34555778999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++........ ...
T Consensus 80 L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~---- 152 (252)
T cd05084 80 FLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--AST---- 152 (252)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--ccc----
Confidence 99998643 34689999999999999999999999999999999999999999999999999875432110 000
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.........|++||+.... ....+.|+|++|++++|+.. |
T Consensus 153 --~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~e~~~~~ 193 (252)
T cd05084 153 --GGMKQIPVKWTAPEALNYG-----RYSSESDVWSFGILLWEAFSLG 193 (252)
T ss_pred --CCCCCCceeecCchhhcCC-----CCChHHHHHHHHHHHHHHHhCC
Confidence 0011122357778766432 24567999999999999885 5
No 227
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=7.5e-31 Score=231.05 Aligned_cols=202 Identities=20% Similarity=0.258 Sum_probs=160.4
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.++||+|+||.||++... ..++..+++|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 45678999999999999999999753 224568899987654 345556889999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPN-------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
...+++|||+++++|.+++..... ..+++..++.++.||+.||.|||+.|++||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 999999999999999999865321 3478899999999999999999999999999999999999999
Q ss_pred cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.+||+|||+++.......... .....+...|++||+... .....++|+|+++++++|+.. |
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~~~g 221 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRV--------GGRTMLPIRWMPPESILY-----RKFTTESDIWSFGVVLWEIFTYG 221 (280)
T ss_pred CEEECCCCceeEcCCCceeec--------CCCccccccccCHHHhcc-----CCcCchhhHHHHHHHHHHHHcCC
Confidence 999999999875533211000 001112234666665543 334567899999999999986 6
No 228
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=7.3e-31 Score=229.18 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=163.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-------HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-------AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
+|.+.+.||+|+||.||+|.+.. +++.+|+|.+...... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNAS-SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecC-CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence 47788899999999999998776 6889999988653221 234467889999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999999653 668999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
........ ........+...|++||+.... ......|+|+++++++|+..|
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~~y~~pe~~~~~-----~~~~~~Dv~slG~il~~l~~g 208 (267)
T cd06628 158 ANSLSTKT----NGARPSLQGSVFWMAPEVVKQT-----SYTRKADIWSLGCLVVEMLTG 208 (267)
T ss_pred cccccCCc----cccccccCCCcCccChhHhccC-----CCCchhhhHHHHHHHHHHhhC
Confidence 32211000 0111112345567777766432 335678999999999999999
No 229
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=3e-31 Score=233.90 Aligned_cols=199 Identities=21% Similarity=0.256 Sum_probs=164.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++|+||+++++++..++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKE-TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECC-CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 478999999999999999999876 6899999998665433344567888999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||++++.|.++... ...+++..++.++.||+.||.|||+.+++|+||+|+||++++++.++|+|||++..........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07846 80 EFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 157 (286)
T ss_pred ecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence 99998888887643 3458999999999999999999999999999999999999999999999999987654322111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....+...|++||+...+ .......|+|+++++++|+..|-|
T Consensus 158 ----------~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~el~~g~~ 199 (286)
T cd07846 158 ----------TDYVATRWYRAPELLVGD----TKYGRAVDIWAVGCLVTEMLTGEP 199 (286)
T ss_pred ----------CcccceeeccCcHHhccc----cccCchHhHHHHHHHHHHHHcCCC
Confidence 111345668888876432 123467899999999999999954
No 230
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=7.8e-31 Score=233.66 Aligned_cols=204 Identities=19% Similarity=0.283 Sum_probs=162.9
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYA 167 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 167 (317)
..+...+|.+.+.||+|+||.||+|.... ..+..||+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 35667899999999999999999997531 134579999886542 345557889999999999 7999999999
Q ss_pred EEEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913 168 HLEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI 233 (317)
Q Consensus 168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni 233 (317)
++......|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999986531 23578888999999999999999999999999999999
Q ss_pred EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|++.++.+||+|||+|+..........+. ...+...|++||..... ....++|+|+++++++|+..
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTT--------NGRLPVKWMAPEALFDR-----VYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred EEcCCCcEEECCCccceeccccccccccc--------CCCCCceeeCchhhccC-----CCCchhhHHHHHHHHHHHHc
Confidence 99999999999999998764432211111 11223457888866432 23467899999999999975
No 231
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=1.4e-30 Score=229.24 Aligned_cols=201 Identities=23% Similarity=0.315 Sum_probs=163.6
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcC---CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cC
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRD---CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SH 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 173 (317)
.++|++.+.||+|+||.||++.+.. .++..+|+|++...... .....+.+|+++++.+.|+||+++++++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 4678899999999999999998653 25789999999765432 456789999999999999999999999876 56
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
..+++|||+++++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 7999999999999999996542 358999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
......... ........|.+||+.... ......|+|++|++++|+..|
T Consensus 161 ~~~~~~~~~-------~~~~~~~~~~~Pe~~~~~-----~~~~~~Di~slG~~l~el~tg 208 (284)
T cd05038 161 EDKDYYYVK-------EPGESPIFWYAPECLRTS-----KFSSASDVWSFGVTLYELFTY 208 (284)
T ss_pred cCCcceecc-------CCCCCcccccCcHHHccC-----CCCcccchHHHhhhhheeecc
Confidence 332211100 011223457788876443 345778999999999999998
No 232
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=8.6e-31 Score=231.63 Aligned_cols=202 Identities=19% Similarity=0.218 Sum_probs=159.1
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|..++ ..+..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 456789999999999999999997643 235589999886543 223345678899999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEe
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP--------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLS 244 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~ 244 (317)
...|+||||+++|+|.+++.... ...+....+..++.||+.||.|||+++|+||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999999999999996421 1234667888999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|||+++.......... .....+...|++||+.... ....+.|+|+++++++|+..
T Consensus 162 Dfg~~~~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~-----~~~~~~DvwslG~~l~el~~ 216 (288)
T cd05061 162 DFGMTRDIYETDYYRK--------GGKGLLPVRWMAPESLKDG-----VFTTSSDMWSFGVVLWEITS 216 (288)
T ss_pred cCCccccccccccccc--------cCCCcccccccCHHHhccC-----CCChHhHHHHHHHHHHHHHh
Confidence 9999976533221100 0011223457788776432 33568899999999999986
No 233
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.1e-30 Score=228.07 Aligned_cols=199 Identities=24% Similarity=0.322 Sum_probs=162.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh---cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL---SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHY 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 174 (317)
..|++.+.||+|+||.||+|.+.. ++..|++|.+..... ..+....+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVD-TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcC-CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCE
Confidence 368889999999999999998876 789999999865422 23455678899999999999999999998865 467
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+++++||+++++|.+++... ..+++...+.++.||+.||.|||+.+|+|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 89999999999999998653 5689999999999999999999999999999999999999999999999999976543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... ......+...|.+||+... ....++.|+|+++++++|+..|
T Consensus 159 ~~~~~~-------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~i~~el~~g 205 (266)
T cd06651 159 ICMSGT-------GIRSVTGTPYWMSPEVISG-----EGYGRKADVWSLGCTVVEMLTE 205 (266)
T ss_pred ccccCC-------ccccCCccccccCHHHhCC-----CCCCchhhhHHHHHHHHHHHHC
Confidence 211100 0011235567888887643 2345788999999999999999
No 234
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=8.7e-31 Score=228.07 Aligned_cols=199 Identities=21% Similarity=0.268 Sum_probs=159.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||+|+||.||+|.+.. +..+|+|.+..... ..+.+.+|+++++.++|+|++++++++. .+..+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNG--TTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcC--CceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 345679999999999999999998765 45799998865432 2356788999999999999999998875 45689
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
++|||+.+++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999997654322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.... ........|++||+... .....+.|+|+++++++|+.. | +|
T Consensus 157 ~~~~---------~~~~~~~~y~~Pe~~~~-----~~~~~~~Di~slG~~l~el~t~g~~p 203 (260)
T cd05069 157 YTAR---------QGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELVTKGRVP 203 (260)
T ss_pred cccc---------CCCccchhhCCHHHhcc-----CCcChHHHHHHHHHHHHHHHhCCCCC
Confidence 1100 01122345777776542 345678999999999999987 6 44
No 235
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=8.6e-31 Score=229.22 Aligned_cols=201 Identities=22% Similarity=0.331 Sum_probs=165.3
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecC----
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSH---- 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~---- 173 (317)
.++|++.+.||+|+||.||+|.+.. +++.+++|++.... .....+.+|+.+++.+ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKK-TGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECC-CCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 3789999999999999999999876 68899999987643 2346788999999998 6999999999986544
Q ss_pred --EEEEEEcccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 174 --YICFLIDYCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 174 --~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
.+|+||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999886533 467899999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
......... .....++..|++||....+...........|+|++|++++|+..|
T Consensus 161 ~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g 214 (275)
T cd06608 161 AQLDSTLGR----------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADG 214 (275)
T ss_pred eecccchhh----------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhC
Confidence 765432211 112245667899987654443333445678999999999999998
No 236
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=9.5e-31 Score=228.65 Aligned_cols=205 Identities=21% Similarity=0.257 Sum_probs=161.9
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
+..++|+..+.||+|+||.||+|...... ...+++|.+.... .....+.+.+|+++++.++|+||+++++++...+.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34567889999999999999999886521 2379999986543 33445678899999999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999999998653 35689999999999999999999999999999999999999999999999999876543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
......+... ......|++||+.. ......+.|+|+++++++|+.. | .|
T Consensus 160 ~~~~~~~~~~-------~~~~~~y~~PE~~~-----~~~~~~~~Dv~slG~il~ell~~g~~p 210 (268)
T cd05063 160 DPEGTYTTSG-------GKIPIRWTAPEAIA-----YRKFTSASDVWSFGIVMWEVMSFGERP 210 (268)
T ss_pred ccccceeccC-------CCcCceecCHHHhh-----cCCcChHhHHHHHHHHHHHHHhCCCCC
Confidence 2221111000 01112466666553 3334578999999999999775 6 55
No 237
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=216.68 Aligned_cols=206 Identities=23% Similarity=0.326 Sum_probs=174.5
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC-CCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH-PFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~ 173 (317)
..+..+.|+++++||.|+||.+|+|.... .|+.||||+-....- ..++..|.++.+.|++ ..|+.+..++.+..
T Consensus 10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~-~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 10 ELIVGGKYKLVRKIGSGSFGDIYLGISIT-SGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hheeccceEEEEeecCCchhheeeeeecc-CCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 35677899999999999999999998877 899999998765422 2356778999999874 67888888888888
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecccc
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDLCF 250 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~a~ 250 (317)
+-.+||+++ |-+|.+++.- ....|+..+++.++-|++.-++|+|.+++|||||||+|+|+.- -..+.|+|||+|+
T Consensus 85 ynvlVMdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred cceeeeecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 999999999 9999998853 3577999999999999999999999999999999999999963 3479999999999
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
++....+. .--.+++...--|+.+|.+.|.+-.+++.||+|++|.+|++++|-.| +|
T Consensus 163 ky~d~~t~--------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LP 220 (341)
T KOG1163|consen 163 KYRDIRTR--------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLP 220 (341)
T ss_pred hhcccccc--------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCc
Confidence 88765432 11223445555699999999999999999999999999999999999 77
No 238
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.5e-30 Score=227.16 Aligned_cols=199 Identities=24% Similarity=0.331 Sum_probs=162.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh---hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL---LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HY 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 174 (317)
.+|++.+.||+|+||.||+|.+.. ++..|++|.+.... ........+.+|+++++.++|+||+++++++... +.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDAD-TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcC-CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence 478999999999999999998876 78999999885431 1235567889999999999999999999998653 56
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+++++||+++++|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 89999999999999998653 4588999999999999999999999999999999999999999999999999987643
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... ......+...|++||+... .....+.|+|+++++++|+..|
T Consensus 159 ~~~~~~-------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g 205 (264)
T cd06653 159 ICMSGT-------GIKSVTGTPYWMSPEVISG-----EGYGRKADVWSVACTVVEMLTE 205 (264)
T ss_pred ccccCc-------cccccCCcccccCHhhhcC-----CCCCccccHHHHHHHHHHHHhC
Confidence 211000 0011234566788887653 2335778999999999999998
No 239
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=2.4e-31 Score=234.35 Aligned_cols=204 Identities=17% Similarity=0.237 Sum_probs=161.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+...+|++.+.||+|+||.||+|.+.. ..+..||+|++.... .....+.+.+|+.++..++||||+++++++...
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 345678889999999999999998753 135789999997543 234456788999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQ--------------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED 238 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~ 238 (317)
...++++||+.+++|.+++... ....+++..++.++.|++.||.|||+.||+||||||+|||++.+
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 9999999999999999887421 12357888899999999999999999999999999999999999
Q ss_pred CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913 239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV 314 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~ 314 (317)
+.+||+|||+++........... ....+...|++||+... .....+.|+|+++++++|+.. |.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~~g~ 224 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLM--------GNSLLPIRWMSPEAIMY-----GKFSIDSDIWSYGVVLWEVFSYGL 224 (283)
T ss_pred CceEecccccccccccchheeec--------cCccCCccccCHHHHhc-----CCCCcchhHHHHHHHHHHHHcCCC
Confidence 99999999998865432211100 01122345788876643 234567899999999999886 64
No 240
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=8.1e-31 Score=230.87 Aligned_cols=202 Identities=22% Similarity=0.311 Sum_probs=165.0
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE------e
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE------V 171 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~------~ 171 (317)
.+.|++.+.||+|+||.||+|.+.. +++.+|+|++... ......+..|+.+++.+ +|+||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVK-TGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcC-CCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 3688999999999999999999877 7899999998654 23345678899999988 6999999999985 3
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
...+|++|||+.+++|.+++.......+++..++.++.||+.||.|||+.+|+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 46789999999999999999766566788999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
....... .....+...|++||..............+.|+|+++++++|+..|-
T Consensus 171 ~~~~~~~----------~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRTVGR----------RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhccccC----------CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 5432211 1112355678888876543322334456789999999999999993
No 241
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=1.8e-30 Score=226.03 Aligned_cols=204 Identities=24% Similarity=0.373 Sum_probs=169.8
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||+|.... +++.|++|.+..........+.+.+|+++++.++|+||+++++.+...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLD-TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECC-CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58999999999999999998876 68999999998765555677889999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++...........
T Consensus 80 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 80 YCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred cCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 9999999999965 35588999999999999999999999999999999999999999999999999877654332211
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. .....+...|++||+..... ........|+|+++++++|+..| .|
T Consensus 158 ~~------~~~~~~~~~~~~PE~~~~~~--~~~~~~~~Dv~s~G~il~~l~~g~~p 205 (264)
T cd06626 158 EE------VQSLAGTPAYMAPEVITGGK--GKGHGRAADIWSLGCVVLEMATGKRP 205 (264)
T ss_pred cc------ccCCcCCcCccChhhccCCC--CCCCCcccchHHHHHHHHHHHhCCCC
Confidence 10 01123445688888876443 12245778999999999999988 44
No 242
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=1.7e-30 Score=228.59 Aligned_cols=200 Identities=20% Similarity=0.253 Sum_probs=161.4
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+...+|++.+.||+|+||.||+|.+.. +++ .+|+|...... .......+.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIP-EGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEec-CCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 445789999999999999999998765 333 68999886553 24455778899999999999999999999887
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
...++||||+++++|.+++... ...+++..++.++.||+.||+|||+.+++|+||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 7889999999999999998654 345899999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
......... ........|++||+... .....+.|+|+++++++|+.. |
T Consensus 160 ~~~~~~~~~--------~~~~~~~~y~~PE~~~~-----~~~~~~~Di~slG~~l~el~~~g 208 (279)
T cd05057 160 DVDEKEYHA--------EGGKVPIKWMALESILH-----RIYTHKSDVWSYGVTVWELMTFG 208 (279)
T ss_pred cCcccceec--------CCCcccccccCHHHhhc-----CCcCchhhHHHHHHHHHHHhcCC
Confidence 533221110 00111235778876542 234578999999999999886 7
No 243
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.4e-30 Score=230.82 Aligned_cols=200 Identities=18% Similarity=0.237 Sum_probs=162.1
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|++|.||+|.+.. +++.||+|.+............+.+|+++++.++|+||+++++++......|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRV-TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecC-CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 679999999999999999999876 7899999998665433344567888999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCCCCCe
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||+ +++|.+++.......+++..++.++.||+.||+|||+++++|+||||+||+++. ++.+||+|||++.........
T Consensus 81 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 81 EYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ecc-cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 999 568888876554455788899999999999999999999999999999999985 557999999999765432111
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ....+...|++||+.... .....+.|+|++|++++|+..|-|
T Consensus 160 ~----------~~~~~~~~y~~PE~~~~~----~~~~~~~Dv~slG~i~~~l~tg~~ 202 (294)
T PLN00009 160 F----------THEVVTLWYRAPEILLGS----RHYSTPVDIWSVGCIFAEMVNQKP 202 (294)
T ss_pred c----------ccCceeecccCHHHHhCC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0 011334568888876432 123467899999999999999944
No 244
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=8.5e-31 Score=231.83 Aligned_cols=199 Identities=21% Similarity=0.321 Sum_probs=158.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+|++.+.||+|+||.||+|..... ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 478889999999999999986531 23568888886543 2344577889999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913 177 FLIDYCPNGDLHSLLPKQ----------------------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL 234 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~----------------------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil 234 (317)
+++||+.+++|.+++... ....+++..++.++.|++.||.|||+.+|+||||||+|||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999999999987532 1235788999999999999999999999999999999999
Q ss_pred EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
++.++.+||+|||+++.......... ......+..|++||+.... ....+.|+|+++++++|+.. |
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~--------~~~~~~~~~y~apE~~~~~-----~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVK--------RSKGRIPVKWMAIESLFDH-----IYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred EcCCCcEEeccccccccccCccchhc--------ccCCCCCccccCHHHHccC-----CcchHhHHHHHHHHHHHHHhcC
Confidence 99999999999999976543322111 0111233468888866432 34578899999999999987 6
No 245
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=5.8e-31 Score=233.17 Aligned_cols=200 Identities=21% Similarity=0.199 Sum_probs=163.5
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HYIC 176 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 176 (317)
.++|++.+.||+|+||.||+|.+.. +++.+++|.+............+.+|+.+++.++||||+++++++... +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKK-TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECC-CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 3578999999999999999999876 788999999976544444445677899999999999999999998877 8999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+. ++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999995 69988886542 468999999999999999999999999999999999999999999999999997665432
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
... ....+...|++||....... .....|+|+++++++|+..|.|
T Consensus 161 ~~~----------~~~~~~~~~~aPE~~~~~~~----~~~~~Di~slG~~l~~l~~g~~ 205 (293)
T cd07843 161 KPY----------TQLVVTLWYRAPELLLGAKE----YSTAIDMWSVGCIFAELLTKKP 205 (293)
T ss_pred ccc----------ccccccccccCchhhcCCcc----ccchhhHHHHHHHHHHHHhCCC
Confidence 111 11123456788887643221 3567999999999999999854
No 246
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.1e-30 Score=235.79 Aligned_cols=204 Identities=21% Similarity=0.286 Sum_probs=161.5
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYA 167 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 167 (317)
..+...+|++++.||+|+||.||+|.+.. .....||+|.+.... .......+.+|+++++++ +|+||+++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 35566789999999999999999997642 122468999886542 344567889999999999 7999999999
Q ss_pred EEEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913 168 HLEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI 233 (317)
Q Consensus 168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni 233 (317)
++...+.++++|||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 9999999999999999999999986531 23477888999999999999999999999999999999
Q ss_pred EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|++.++.+||+|||+++............ .......|++||.... .....++|+|+++++++|+..
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~--------~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~~ 231 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTT--------NGRLPVKWMAPEALFD-----RVYTHQSDVWSFGVLLWEIFT 231 (334)
T ss_pred EEcCCCcEEECCcccceeccccccccccc--------CCCcCceEcCHHHhcc-----CCcCchhhhHHHHHHHHHHHh
Confidence 99999999999999997654322111111 0112235777776543 334567999999999999875
No 247
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3.6e-31 Score=233.51 Aligned_cols=198 Identities=24% Similarity=0.318 Sum_probs=166.8
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||+|+||.||++.+.. ++..||+|++.... .......+.+|+++++.++|+||+++++.+.....++
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIP-TGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcC-CCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 456789999999999999999998876 78899999986542 3445578899999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
+||||+++++|.+++.. .+.+++..+..++.|++.+|.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 80 MCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 99999999999999865 3568999999999999999999997 68999999999999999999999999998654221
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ....++..|++||+.... ....++|+|+++++++|+..| .|
T Consensus 158 ~~------------~~~~~~~~~~aPE~~~~~-----~~~~~~Di~slG~~l~~l~tg~~p 201 (284)
T cd06620 158 IA------------DTFVGTSTYMSPERIQGG-----KYTVKSDVWSLGISIIELALGKFP 201 (284)
T ss_pred cc------------CccccCcccCCHHHHccC-----CCCccchHHHHHHHHHHHHhCCCC
Confidence 10 122456678888876433 445789999999999999988 44
No 248
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=1.1e-30 Score=227.78 Aligned_cols=200 Identities=20% Similarity=0.258 Sum_probs=162.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh----cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL----SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+|++.+.||+|+||.||+|... +++.+|+|.+..... .......+.+|+++++.++|+||+++++++...+..+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN--QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEc--CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence 5888999999999999999764 588999998865321 2344567899999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+++||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 79 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 79 IFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 999999999999999653 568999999999999999999999999999999999999999999999999987653211
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.... . ........+...|.+||+... .......|+|+++++++|+..|
T Consensus 157 ~~~~-~---~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~Dv~slG~~~~~l~~g 204 (265)
T cd06631 157 LHGT-H---SNMLKSMHGTPYWMAPEVINE-----SGYGRKSDIWSIGCTVFEMATG 204 (265)
T ss_pred cccc-c---cccccccCCCccccChhhhcC-----CCCcchhhHHHHHHHHHHHHhC
Confidence 1100 0 001112235566778877643 2335678999999999999999
No 249
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=6.5e-31 Score=233.19 Aligned_cols=201 Identities=20% Similarity=0.258 Sum_probs=159.3
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCC-------------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcce
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDC-------------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPT 164 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~-------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 164 (317)
..++|++.+.||+|+||.||+|..... ....||+|.+.... .......+.+|+++++.++|+||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 457899999999999999999976531 12358999987542 3445567899999999999999999
Q ss_pred EEEEEEecCEEEEEEcccCCCChhcccccCC----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913 165 LYAHLEVSHYICFLIDYCPNGDLHSLLPKQP----------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL 234 (317)
Q Consensus 165 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil 234 (317)
+++++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.|++|+||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999885421 123678889999999999999999999999999999999
Q ss_pred EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
++.++.+||+|||+++......... .. ....+...|++||+... .....+.|+|+++++++|+..
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~--~~------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYR--IQ------GRAVLPIRWMAWESILL-----GKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred EcCCCcEEecccccccccccCccee--cc------CcCcCceeecChhhhcc-----CCcCchhhHHHHHHHHHHHHH
Confidence 9999999999999997653322110 00 11122345777776542 334678999999999999875
No 250
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=9.9e-31 Score=228.85 Aligned_cols=200 Identities=20% Similarity=0.200 Sum_probs=155.3
Q ss_pred eecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 107 HLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
.||+|+||.||+|.+.. .++..+++|.+..... ......+.+|+.+++.++||||+++++++.....+++||||++++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999997653 2456799998865532 233456888999999999999999999999889999999999999
Q ss_pred ChhcccccCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecc
Q 042913 186 DLHSLLPKQP---NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 186 sL~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
+|.+++.... ....++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~--- 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV--- 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee---
Confidence 9999986432 2345677888899999999999999999999999999999999999999999986433221110
Q ss_pred cccccccccccccCCCCCcccccccccc--eeccchhhhccCCcccccccCC-C-CC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVME--FVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
......++..|++||........ ......++|+|+++++++|+.. | .|
T Consensus 158 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p 209 (269)
T cd05087 158 -----TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP 209 (269)
T ss_pred -----cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCC
Confidence 01112334568888877533222 2244678999999999999874 7 45
No 251
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=5.9e-31 Score=238.48 Aligned_cols=203 Identities=21% Similarity=0.277 Sum_probs=157.7
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV 171 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 171 (317)
+..++|++.+.||+|+||.||+|.+. ..+++.||||+++... .......+.+|+.++..+ +|+||+++++++..
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 45578999999999999999999753 2357899999997543 234456788999999999 68999999998754
Q ss_pred -cCEEEEEEcccCCCChhcccccCC-------------------------------------------------------
Q 042913 172 -SHYICFLIDYCPNGDLHSLLPKQP------------------------------------------------------- 195 (317)
Q Consensus 172 -~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 195 (317)
+..+++||||+++|+|.+++....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 456899999999999998875421
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccc
Q 042913 196 ----------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGS 265 (317)
Q Consensus 196 ----------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 265 (317)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........... +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~--~- 239 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK--G- 239 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc--C-
Confidence 123677888899999999999999999999999999999999999999999999765332211110 0
Q ss_pred ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 266 ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
...+...|++||.... .....++|+|+++++++|+.. |
T Consensus 240 -----~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~~g 278 (343)
T cd05103 240 -----DARLPLKWMAPETIFD-----RVYTIQSDVWSFGVLLWEIFSLG 278 (343)
T ss_pred -----CCCCCcceECcHHhcC-----CCCCchhhHHHHHHHHHHHHHCC
Confidence 0122345777776533 234567999999999999874 5
No 252
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.2e-30 Score=237.27 Aligned_cols=194 Identities=17% Similarity=0.253 Sum_probs=159.8
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|++.+..........+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTV-TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECC-CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 45889999999999999999999887 789999999876544445556778899999999999999999988543
Q ss_pred -CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 173 -HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 173 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
...|+||||+ .++|.+.+... +++..+..++.||+.||.|||..||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 93 FQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred cCcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 3579999999 56888887432 88999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... .....++..|++||.... .....+.|+|++|++++|+..|
T Consensus 168 ~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~~l~~g 213 (353)
T cd07850 168 AGTSFM-----------MTPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGEMIRG 213 (353)
T ss_pred CCCCCC-----------CCCCcccccccCHHHHhC-----CCCCCchhhHhHHHHHHHHHHC
Confidence 543211 011134456777776643 3445778999999999999988
No 253
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=9.7e-31 Score=227.11 Aligned_cols=196 Identities=23% Similarity=0.275 Sum_probs=159.1
Q ss_pred eeecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|++|.||+|.+....+. .||+|.+...... ...+.+.+|+.+++.++|+||+++++.+.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 3589999999999987653333 6899999776443 566789999999999999999999999988 88999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||+++.+.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~-- 156 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM-- 156 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec--
Confidence 999999997654356899999999999999999999999999999999999999999999999999876542221100
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.....+..+|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 157 -----~~~~~~~~~y~~pE~~~~-----~~~~~~~Di~slG~~l~el~t~g~~p 200 (257)
T cd05040 157 -----EEHLKVPFAWCAPESLRT-----RTFSHASDVWMFGVTLWEMFTYGEEP 200 (257)
T ss_pred -----ccCCCCCceecCHHHhcc-----cCcCchhhhHHHHHHHHHHHhCCCCC
Confidence 012234567888886643 224567899999999999986 6 44
No 254
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=8.2e-31 Score=228.16 Aligned_cols=197 Identities=22% Similarity=0.281 Sum_probs=160.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||+|+||.||+|.... +..+|+|.+...... .+.+.+|+.+++.++|+|++++++++. ....+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNG--NTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecC--CceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 456789999999999999999997664 677999998764333 245788999999999999999999875 45689
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
++|||+++++|.+++.......+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 99999999999999976555678999999999999999999999999999999999999999999999999997654322
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.... . ...+...|++||+... .......|+|+++++++|+.. |
T Consensus 157 ~~~~--~-------~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~~l~~~g 200 (260)
T cd05070 157 YTAR--Q-------GAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred cccc--c-------CCCCCccccChHHHhc-----CCCcchhhhHHHHHHHHHHHhcC
Confidence 1100 0 0012235888886542 234568899999999999987 6
No 255
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=1.5e-30 Score=230.70 Aligned_cols=201 Identities=23% Similarity=0.311 Sum_probs=162.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCC---------------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDC---------------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL 162 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~---------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 162 (317)
..++|++++.||+|+||.||+|.+... .+..||+|.+.... .......+.+|+++++.++|+||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCE
Confidence 457899999999999999999987642 12458999987553 23456788999999999999999
Q ss_pred ceEEEEEEecCEEEEEEcccCCCChhcccccCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913 163 PTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQP---------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI 233 (317)
Q Consensus 163 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni 233 (317)
+++++++..+...+++|||+++++|.+++.... ...+++..++.++.|++.||.|||+.+|+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999999999999986532 12689999999999999999999999999999999999
Q ss_pred EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
+++.++.++|+|||+++.......... .....++..|++||+... .....+.|+|+++++++|+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~~ 227 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRV--------QGRAPLPIRWMAWESVLL-----GKFTTKSDVWAFGVTLWEILT 227 (296)
T ss_pred eecCCCceEEccccceeecccCcceee--------cCcCCCCceecCHHHhhc-----CCCCccchhhhhHHHHHHHHh
Confidence 999999999999999876543221100 111123456788887643 234577999999999999865
No 256
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=3e-30 Score=228.37 Aligned_cols=202 Identities=20% Similarity=0.266 Sum_probs=163.3
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec-----
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~----- 172 (317)
.++|.+.+.||+|+||.||++.... +++.+|+|++.... .....+.+|+.+++.+ +|+|++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~-~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKK-DGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 4789999999999999999998876 78999999986432 2235567899999988 799999999998643
Q ss_pred CEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
+.+|+||||+++++|.+++... ....+++..++.++.|++.||+|||+.+++|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 4689999999999999987532 24568999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
......... ....+...|++||....+.........+.|+|+++++++|+..|-
T Consensus 177 ~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~ 230 (291)
T cd06639 177 QLTSTRLRR----------NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGD 230 (291)
T ss_pred hcccccccc----------cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCC
Confidence 654322110 112345668888876544322233467899999999999999993
No 257
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.1e-30 Score=230.18 Aligned_cols=195 Identities=21% Similarity=0.295 Sum_probs=164.8
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|++.+.||.|+||.||+|.+.. +++.|++|.+.... ....+.+.+|+.+++.++|+||+++++.+.....+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVA-TGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcC-CCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 4679999999999999999998776 78999999986542 23346788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
+||+++++|.+++.. ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 95 MEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred EEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 999999999998854 45899999999999999999999999999999999999999999999999998765433211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||..... .....+|+|+++++++|+..|.
T Consensus 172 ----------~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 172 ----------RSTMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred ----------CCCcCCCccccCcchhcCC-----CCCchhhHHHHHHHHHHHHhCC
Confidence 1112355678888876533 2346799999999999999984
No 258
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=7.4e-31 Score=231.28 Aligned_cols=197 Identities=20% Similarity=0.275 Sum_probs=163.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
.|++++.||.|++|.||+|.+.. ++..||||.+............+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECC-CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999998876 78999999987654344444678899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+ .++|.+++.......+++..++.++.||+.||+|||+.+++|+||+|+||+++.++.+||+|||+++.........
T Consensus 80 ~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~- 157 (284)
T cd07860 80 FL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 157 (284)
T ss_pred cc-ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc-
Confidence 99 5689888876656778999999999999999999999999999999999999999999999999987654322111
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....+...|++||...... ......|+|++|++++|+..|
T Consensus 158 ---------~~~~~~~~y~aPE~~~~~~----~~~~~~Dv~slG~il~~l~tg 197 (284)
T cd07860 158 ---------THEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 197 (284)
T ss_pred ---------ccccccccccCCeEEecCC----CCCcHHHHHHHHHHHHHHHHC
Confidence 1112345688888664321 124678999999999999998
No 259
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=1.2e-30 Score=226.56 Aligned_cols=194 Identities=24% Similarity=0.344 Sum_probs=159.1
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE-EecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL-EVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 175 (317)
+...+|++.+.||+|+||.||++... +..+++|.+... ...+.+.+|+.+++.++|+|++++++++ ..++..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc---CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 45678999999999999999999655 578999998643 2235688899999999999999999975 455678
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
+++|||+++++|.+++.......+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999999997655556899999999999999999999999999999999999999999999999998754332
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
... ......|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 156 ~~~-------------~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~i~~~l~~~g~~p 199 (256)
T cd05082 156 QDT-------------GKLPVKWTAPEALRE-----KKFSTKSDVWSFGILLWEIYSFGRVP 199 (256)
T ss_pred CCC-------------CccceeecCHHHHcc-----CCCCchhhhHHHHHHHHHHHhCCCCC
Confidence 110 112346888887643 233567999999999999985 5 44
No 260
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=1.4e-30 Score=231.20 Aligned_cols=201 Identities=22% Similarity=0.264 Sum_probs=158.1
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcC---------------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRD---------------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL 162 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~---------------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 162 (317)
..++|++.+.||+|+||.||++.+.. .+...+|+|++.... .......+.+|+++++.++|+||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCc
Confidence 34679999999999999999986432 123468999987542 34455678899999999999999
Q ss_pred ceEEEEEEecCEEEEEEcccCCCChhcccccCC---------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913 163 PTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQP---------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI 233 (317)
Q Consensus 163 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni 233 (317)
+++++++...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.|++|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999886532 12467788999999999999999999999999999999
Q ss_pred EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|++.++.++|+|||+++.+........ . ........|++||.... .....++|+|+++++++|+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~--~------~~~~~~~~~~~pe~~~~-----~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRI--Q------GRAVLPIRWMSWESILL-----GKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceec--c------CcCcCccccCCHHHHhc-----CCccchhhhhHHHHHHHHHHH
Confidence 999999999999999976533221100 0 00112234667765432 234578999999999999975
No 261
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=8.2e-31 Score=228.37 Aligned_cols=199 Identities=24% Similarity=0.383 Sum_probs=160.5
Q ss_pred EEeeeecccCCeEEEEEEEc---CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 103 KLVRHLGTGNLGRVFLCHLR---DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 103 ~i~~~lg~G~~g~Vy~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.+.+.||.|.||.||+|.+. ...+..|+||.+... ......+.+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccc
Confidence 57789999999999999988 124578999999543 34455788999999999999999999999999888899999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++|+|.+++.......+++..+..|+.||+.||.|||+++++|+||+++|||++.++.+||+|||++.........
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~- 159 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY- 159 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999998765677999999999999999999999999999999999999999999999999999876322221
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
...........|.+||...... ...+.|+|+.|.+++|+.. | .|
T Consensus 160 -------~~~~~~~~~~~~~aPE~~~~~~-----~~~ksDVysfG~~l~ei~~~~~~p 205 (259)
T PF07714_consen 160 -------KNDSSQQLPLRYLAPEVLKDGE-----YTKKSDVYSFGMLLYEILTLGKFP 205 (259)
T ss_dssp -------EESTTSESGGGGS-HHHHHHSE-----ESHHHHHHHHHHHHHHHHTTSSGT
T ss_pred -------cccccccccccccccccccccc-----cccccccccccccccccccccccc
Confidence 1111123445677787654443 6789999999999999998 5 44
No 262
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.6e-30 Score=232.15 Aligned_cols=201 Identities=23% Similarity=0.264 Sum_probs=161.8
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HYI 175 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 175 (317)
..++|++.+.||+|+||.||+|.+.. +++.||+|++............+.+|+.+++.++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTT-SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECC-CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 45789999999999999999999876 789999999875433333334566799999999999999999998754 568
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++||||+. ++|.+++... ...+++..++.++.||+.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999994 6888887643 356899999999999999999999999999999999999999999999999999776432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
... .........|++||..... .......|+|+++++++|+..|-|
T Consensus 162 ~~~----------~~~~~~~~~y~aPE~~~~~----~~~~~~~DvwslG~il~el~~g~~ 207 (309)
T cd07845 162 AKP----------MTPKVVTLWYRAPELLLGC----TTYTTAIDMWAVGCILAELLAHKP 207 (309)
T ss_pred cCC----------CCcccccccccChhhhcCC----CCcCchHHHHHHHHHHHHHHhCCC
Confidence 210 1111234567888865432 223567899999999999999954
No 263
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.6e-30 Score=232.83 Aligned_cols=195 Identities=20% Similarity=0.240 Sum_probs=149.5
Q ss_pred eeeecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE--ecCEEEEEEcc
Q 042913 105 VRHLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE--VSHYICFLIDY 181 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~ 181 (317)
..+||+|+||.||+|.... .++..||+|.+..... ...+.+|+++++.++||||+++++++. .+..+++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3579999999999998653 2567899998865421 235678999999999999999999885 45678999999
Q ss_pred cCCCChhcccccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeecccc
Q 042913 182 CPNGDLHSLLPKQ-------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL----REDGHIMLSDFDLCF 250 (317)
Q Consensus 182 ~~~gsL~~~l~~~-------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill----~~~~~~kl~DFG~a~ 250 (317)
+ +++|.+++... ....+++..++.++.||+.||.|||+.+|+||||||+|||+ +.++.+||+|||+|+
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 56777766421 12357899999999999999999999999999999999999 456799999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.......... ......++..|++||..... .......|+|++|++++|+..|-|
T Consensus 161 ~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlG~il~el~tg~~ 214 (317)
T cd07867 161 LFNSPLKPLA-------DLDPVVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEP 214 (317)
T ss_pred ccCCCccccc-------ccCcceecccccCcHHhcCC----CccCcHHHHHhHHHHHHHHHhCCC
Confidence 7643221100 01112345667888765421 223577999999999999999955
No 264
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.7e-30 Score=232.58 Aligned_cols=203 Identities=19% Similarity=0.267 Sum_probs=161.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAH 168 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 168 (317)
.+...+|.+.+.||+|+||.||+|.... .....+|+|.+.... .......+.+|+++++.+ +||||++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 3455789999999999999999997532 134579999987542 344556788999999999 59999999999
Q ss_pred EEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913 169 LEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL 234 (317)
Q Consensus 169 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil 234 (317)
+...+.+|++|||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 999999999999999999999986532 245788999999999999999999999999999999999
Q ss_pred EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
++.++.+||+|||+++............. ......|++||..... ....+.|+|+++++++|+..
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~l~el~~ 231 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSN--------GRLPVKWMAPEALFDR-----VYTHQSDVWSFGILMWEIFT 231 (314)
T ss_pred EcCCCcEEEcccccccccccccccccccc--------CCCCccccCHHHHccC-----CcCccchhhHHHHHHHHHHh
Confidence 99999999999999986543221111111 1122358888876432 23567899999999999876
No 265
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=1.6e-30 Score=228.93 Aligned_cols=200 Identities=16% Similarity=0.196 Sum_probs=158.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++++.||+|+||.||+|.+.. ++. .+++|.+... .......++..|+.+++.++||||+++++++. .
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIP-EGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcC-CCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence 445789999999999999999998865 344 4777777432 12344567788888999999999999999875 4
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
...++++||+++|+|.+++... ...+++..++.++.||+.||.|||+.+++||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 5578999999999999999654 356899999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
....... ......+...|++||+.... ....++|+|+++++++|+.. |
T Consensus 160 ~~~~~~~--------~~~~~~~~~~y~~pE~~~~~-----~~~~~~Dv~slG~il~el~t~g 208 (279)
T cd05111 160 YPDDKKY--------FYSEHKTPIKWMALESILFG-----RYTHQSDVWSYGVTVWEMMSYG 208 (279)
T ss_pred cCCCccc--------ccCCCCCcccccCHHHhccC-----CcCchhhHHHHHHHHHHHHcCC
Confidence 3322110 01112334468888876432 34578999999999999975 6
No 266
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=2.7e-30 Score=226.31 Aligned_cols=199 Identities=27% Similarity=0.364 Sum_probs=162.5
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh--------cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL--------SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+|.+.+.||+|+||.||+|.... +++.+|+|.+..... .....+.+..|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVT-TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecC-CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 58889999999999999998776 688999998864211 112345678899999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+.+++||||+++++|.+++... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||+++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 9999999999999999999654 67899999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... .......+...|.+||...... .......|+|+++++++|+..|
T Consensus 159 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~---~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 159 DDIYDN--------DQNMSMQGSVFWMAPEVIHSYS---QGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred cccccc--------cccccccCCccccCHHHhcccc---CCCCccchhHHHHHHHHHHHhC
Confidence 322111 0111123456788888765332 1245678999999999999999
No 267
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=2e-30 Score=225.12 Aligned_cols=193 Identities=24% Similarity=0.307 Sum_probs=162.5
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+..++|++.+.||.|+||.||+|... ++.||+|.+..... ..+++.+|+.+++.++|+||+++++++......+
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~---~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR---GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec---CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 34678999999999999999999765 68899999976532 4567889999999999999999999999899999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+||||+++++|.+++.......+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 99999999999999976544578999999999999999999999999999999999999999999999999997663221
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
. .......|.+||+.... ....+.|+|+++++++|+.. |
T Consensus 157 ~-------------~~~~~~~~~ape~~~~~-----~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 157 D-------------SGKLPVKWTAPEALREK-----KFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred c-------------cCCCcccccCchhhcCC-----cCCcHHHHHHHHHHHHHHHhcC
Confidence 1 01223468888876432 23457899999999999875 6
No 268
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=2e-30 Score=227.92 Aligned_cols=191 Identities=28% Similarity=0.429 Sum_probs=158.4
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||+|+||.||+|.... +++.|++|++....... .....+.+|+++++.++||||+++++.+...+..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKA-TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcC-CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 6899999999998776 78999999997643322 334566789999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++.......+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------- 151 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI-------- 151 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc--------
Confidence 999987654457899999999999999999999999999999999999999999999999998765321110
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....+...|++||+...+. .....|+|+++++++|+..| .|
T Consensus 152 ---~~~~~~~~y~~PE~~~~~~-----~~~~~Di~slG~il~~l~~g~~p 193 (277)
T cd05577 152 ---KGRAGTPGYMAPEVLQGEV-----YDFSVDWFALGCTLYEMIAGRSP 193 (277)
T ss_pred ---ccccCCCCcCCHHHhcCCC-----CCchhhhHHHHHHHHHHhhCCCC
Confidence 1123445678888765332 45779999999999999998 55
No 269
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=1.8e-30 Score=227.79 Aligned_cols=195 Identities=25% Similarity=0.404 Sum_probs=165.6
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||.|+||.||+|.+.. ++..|++|++.... .......+.+|+++++.++|+||+++++++..+..+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKR-TNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECC-CCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 468889999999999999999877 78999999987653 2344567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++... .+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||+++........
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~- 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK- 154 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc-
Confidence 999999999998642 7899999999999999999999999999999999999999999999999999776543211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||+..... ...+.|+|++|++++|+..|.
T Consensus 155 ---------~~~~~~~~~y~~PE~~~~~~-----~~~~sDv~slG~il~~l~tg~ 195 (274)
T cd06609 155 ---------RNTFVGTPFWMAPEVIKQSG-----YDEKADIWSLGITAIELAKGE 195 (274)
T ss_pred ---------cccccCCccccChhhhccCC-----CCchhhHHHHHHHHHHHHhCC
Confidence 11123455678888765432 557899999999999999993
No 270
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=1.9e-30 Score=225.12 Aligned_cols=193 Identities=22% Similarity=0.288 Sum_probs=160.2
Q ss_pred eeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.+.. ..+..|++|++....... ..+.+.+|+++++.++|+||+++++++.....+++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 359999999999998875 127899999997654333 56788999999999999999999999999999999999999
Q ss_pred CCChhcccccCC-------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 184 NGDLHSLLPKQP-------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 184 ~gsL~~~l~~~~-------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+++|.+++.... ...+++..++.++.||+.||.|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 999999996642 3678999999999999999999999999999999999999999999999999998765433
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
.. ...........|++||..... ....+.|+|+++++++|+..
T Consensus 160 ~~--------~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~~l~~ 202 (262)
T cd00192 160 YY--------RKKTGGKLPIRWMAPESLKDG-----IFTSKSDVWSFGVLLWEIFT 202 (262)
T ss_pred cc--------ccccCCCcCccccCHHHhccC-----CcchhhccHHHHHHHHHHHh
Confidence 21 011122344567888866544 45678999999999999876
No 271
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=3.6e-30 Score=222.60 Aligned_cols=191 Identities=25% Similarity=0.318 Sum_probs=155.0
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
.||+|+||.||+|... .+..+|+|++.... .......+.+|+++++.++|+||+++++++...+..++||||+++++
T Consensus 2 ~ig~g~~g~vy~~~~~--~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLK--DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEec--CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 5899999999999865 47899999987543 33444568899999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++... ...+.+..+..++.|++.+|.|||+.|++|+||||+||+++.++.+||+|||++..........
T Consensus 79 L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------- 150 (250)
T cd05085 79 FLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS------- 150 (250)
T ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc-------
Confidence 99988654 3457899999999999999999999999999999999999999999999999987543221110
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.........|++||+.... ....+.|+|+++++++|+.. | .|
T Consensus 151 --~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~ll~~~~~~g~~p 194 (250)
T cd05085 151 --SGLKQIPIKWTAPEALNYG-----RYSSESDVWSYGILLWETFSLGVCP 194 (250)
T ss_pred --CCCCCCcccccCHHHhccC-----CCCchhHHHHHHHHHHHHhcCCCCC
Confidence 0011223468888876433 24567899999999999886 6 44
No 272
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=3.1e-30 Score=224.37 Aligned_cols=194 Identities=21% Similarity=0.285 Sum_probs=152.7
Q ss_pred eecccCCeEEEEEEEcCC-CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 107 HLGTGNLGRVFLCHLRDC-TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
.||+|+||.||+|.+... .+..||+|++.... .....+.+.+|+.+++.++|+||+++++++. ....++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 389999999999977531 35579999986542 3445567899999999999999999999876 45789999999999
Q ss_pred ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccc
Q 042913 186 DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGS 265 (317)
Q Consensus 186 sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 265 (317)
+|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.............
T Consensus 80 ~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~-- 156 (257)
T cd05115 80 PLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS-- 156 (257)
T ss_pred CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC--
Confidence 999998643 35689999999999999999999999999999999999999999999999999976543332211110
Q ss_pred ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 266 ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
.......|++||... ......++|+|+++++++|+.. | .|
T Consensus 157 -----~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~~g~~p 198 (257)
T cd05115 157 -----AGKWPLKWYAPECIN-----FRKFSSRSDVWSYGITMWEAFSYGQKP 198 (257)
T ss_pred -----CCCCCcccCCHHHHc-----cCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 011234577777653 2234568999999999999874 6 44
No 273
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=2.8e-30 Score=230.26 Aligned_cols=205 Identities=22% Similarity=0.275 Sum_probs=161.5
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH---- 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 173 (317)
..++|++.+.||+|+||.||+|.... +++.||+|.+............+.+|+++++.++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKK-TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECC-CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 35689999999999999999998877 7899999998654333333345678999999999999999999876543
Q ss_pred ----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 174 ----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 174 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
..++||||+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 89 RYKGSFYLVFEFC-EHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCCceEEEEEcCC-CcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 469999999 56888877543 346899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
........... .......++..|++||+...... .....|+|++|++++|+..|.|
T Consensus 167 ~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~----~~~~~Di~slG~~l~el~t~~~ 222 (310)
T cd07865 167 RAFSLSKNSKP------NRYTNRVVTLWYRPPELLLGERD----YGPPIDMWGAGCIMAEMWTRSP 222 (310)
T ss_pred ccccCCcccCC------CCccCcccCccccCcHHhcCCcc----cCchhhhHHHHHHHHHHHhCCC
Confidence 76543221110 00111234567888887643221 2357899999999999988843
No 274
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.6e-30 Score=227.06 Aligned_cols=201 Identities=29% Similarity=0.453 Sum_probs=162.5
Q ss_pred CeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLS--AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 175 (317)
.|++.+.||+|+||.||+|.... .+++.||+|++...... ....+.+.+|+.+++.+ +|+||+++++.+..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 48899999999999999998742 25789999999764321 23446778899999999 599999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999998653 56889999999999999999999999999999999999999999999999999765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.... .....+...|++||+....... .....|+|+++++++|+..| .|
T Consensus 159 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~---~~~~~Dv~slG~~l~~ll~g~~p 207 (290)
T cd05613 159 EVER---------AYSFCGTIEYMAPDIVRGGDGG---HDKAVDWWSMGVLMYELLTGASP 207 (290)
T ss_pred cccc---------cccccCCcccCChhhccCCCCC---CCccccHHHHHHHHHHHhcCCCC
Confidence 2110 0112345568888877542211 23568999999999999999 45
No 275
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=245.90 Aligned_cols=202 Identities=32% Similarity=0.481 Sum_probs=177.0
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
.++.+.+++++..||-|+||.|-++..+. ....+|+|++++... .....+++..|.+||..++.|.||++|-.|.+++
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~-~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNS-QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK 493 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecc-cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence 35667889999999999999999998876 344699999977543 3466788999999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
++||+||-|-||.|+.+++++ +.|.+..++.++..+++|++|||.+|||+|||||+|++++.+|.+||.|||+|+++.
T Consensus 494 yvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999999999664 789999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..... -| ..|+|||..+++.--+.-.+..|.|+++..+.|+..|-|
T Consensus 572 ~g~KT-wT---------------FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 572 SGRKT-WT---------------FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred cCCce-ee---------------ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence 54421 12 236788888887776777899999999999999999955
No 276
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=2.6e-30 Score=226.77 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=160.1
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
...+|++.+.||+|+||.||+|+.... ..+.|++|.+.... .......+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 447899999999999999999987531 34679999886532 2335677899999999999999999999999989
Q ss_pred EEEEEEcccCCCChhcccccCCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPN-------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+|+||||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999999865431 16899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|+++........ ......+...|++||+.... ....+.|+|+++++++|+..
T Consensus 162 ~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~-----~~~~~~Di~slG~~l~~l~~ 213 (275)
T cd05046 162 SLSKDVYNSEYY---------KLRNALIPLRWLAPEAVQED-----DFSTKSDVWSFGVLMWEVFT 213 (275)
T ss_pred ccccccCccccc---------ccCCceeEEeecChhhhccC-----CCCchhhHHHHHHHHHHHHh
Confidence 998644321110 01111223347778765432 23467899999999999886
No 277
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=6.3e-31 Score=233.08 Aligned_cols=195 Identities=22% Similarity=0.317 Sum_probs=160.6
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+.|.....||+|+||.||++.... ++..||||.+... .....+.+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKH-TGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECC-CCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 344555679999999999998776 7889999998654 3344567889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.. ..+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||++..........
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence 99999999998843 458899999999999999999999999999999999999999999999999987653322111
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||+... .....+.|+|+++++++|+..| .|
T Consensus 176 ----------~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 176 ----------KSLVGTPYWMAPEVISR-----LPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred ----------ceeecCccccCHHHHcc-----CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 11234556778876643 3345789999999999999999 44
No 278
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-30 Score=232.65 Aligned_cols=206 Identities=28% Similarity=0.368 Sum_probs=168.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC----CCcceEEEEE-EecCEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH----PFLPTLYAHL-EVSHYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~~iv~~~~~~-~~~~~~ 175 (317)
+|++.+.||+|+||.||+|.+.......+|+|+....... ....+..|+.++..+.. .++..+++.+ ..+.+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~--~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS--KPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC--CCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999887623467899987654211 11257788999888873 6899999999 578899
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-----CcEEEeeecccc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-----GHIMLSDFDLCF 250 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-----~~~kl~DFG~a~ 250 (317)
|+||+.+ |.+|.++....+.+.|+..++..++.|++.+|++||+.|++||||||+|+++... ..++|.|||+|+
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 9999999 9999999877767889999999999999999999999999999999999999854 369999999998
Q ss_pred cCCCCCCeeeccccccccccccc-ccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRK-SCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
+.......... .+.++. .....|+.+|++.+++...++.+++|+|++.|+++|+..| +|
T Consensus 176 ~~~~~~~~~~~------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LP 236 (322)
T KOG1164|consen 176 RFKYVGDSGGN------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLP 236 (322)
T ss_pred cccccCCCCcc------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCC
Confidence 43321111000 112222 3455699999999999999999999999999999999999 88
No 279
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=3.9e-30 Score=228.21 Aligned_cols=208 Identities=16% Similarity=0.220 Sum_probs=146.6
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCC---CceEEEEEeehhhhcH--H-H------HHHHHHHHHHHHhcCCCCcc
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCT---SANFALKVVDKDLLSA--K-K------LSHVQMEAEILSMLDHPFLP 163 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~---~~~vavK~~~~~~~~~--~-~------~~~~~~E~~~l~~l~h~~iv 163 (317)
++..++|++.+.||+|+||.||+|.+.. + +..+++|+........ + . ......+...+..+.|+|++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCAS-DHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcC-CcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 4556899999999999999999998876 4 5677777653321110 0 0 01122233445567899999
Q ss_pred eEEEEEEecC----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 164 TLYAHLEVSH----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 164 ~~~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
++++.+.... ..+++++++ ..++.+++... ..+++..++.++.|++.||.|||+.+|+||||||+|||++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN 163 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9998765433 457888887 55777666442 3467888999999999999999999999999999999999999
Q ss_pred cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.++|+|||+|+.+......... .........++..|++|+. ........++|+||++++++|+..| .|
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~---~~~~~~~~~gt~~y~ape~-----~~~~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEY---SKEQKDLHRGTLYYAGLDA-----HNGACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred cEEEEEcCCceeeccCCccccc---ccccccccCCCccccCHHH-----hCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999876432211100 0000011124444555554 4444567899999999999999999 55
No 280
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=4.9e-30 Score=222.09 Aligned_cols=197 Identities=23% Similarity=0.377 Sum_probs=166.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||.|+||.||++.+.. ++..|++|++............+.+|+++++.++|+|++++++.+......++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKS-DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcC-CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999887 78999999998765555667788999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 181 YCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|+++++|.+++.... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 999999999987643 467899999999999999999999999999999999999999999999999999765443311
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.. ...+...|++||+... .......|+|+++++++|+..|
T Consensus 160 ~~----------~~~~~~~y~~pe~~~~-----~~~~~~~Dv~slG~~~~~l~~g 199 (258)
T cd08215 160 AK----------TVVGTPYYLSPELCQN-----KPYNYKSDIWSLGCVLYELCTL 199 (258)
T ss_pred ec----------ceeeeecccChhHhcc-----CCCCccccHHHHHHHHHHHHcC
Confidence 11 1123345677776533 3345779999999999999988
No 281
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=3.2e-30 Score=224.03 Aligned_cols=192 Identities=19% Similarity=0.257 Sum_probs=153.7
Q ss_pred eeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
++||+|+||.||+|.+...+ +..+|+|.+...... ...+.+.+|+.+++.+.|+||+++++++. ....++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 36999999999999876522 378999998765433 45567889999999999999999999876 456899999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++... ..+++..++.++.|++.||.|||..+++|+||||+|||++.++.+||+|||+++.............
T Consensus 79 ~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 79 LGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 99999999654 4789999999999999999999999999999999999999999999999999986644332111100
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
...+...|++||+.... ....+.|+|+++++++|+.. |
T Consensus 157 -------~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 157 -------AGRWPLKWYAPECINYG-----KFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred -------CccccccccCHHHhcCC-----CCCccchHHHHHHHHHHHHcCC
Confidence 11122357888766432 24568999999999999986 6
No 282
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=7.3e-30 Score=220.75 Aligned_cols=195 Identities=24% Similarity=0.350 Sum_probs=167.4
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|++|.||++.... .++.|++|.+............+.+|+++++.++|+|++++++++...+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLE-TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcC-CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58899999999999999998876 68899999998776555667889999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++... ..+++..++.++.|++.+|.|||+.||+|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-- 155 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence 99999999998654 67899999999999999999999999999999999999999999999999999876543321
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.....+...|.+||+..... .....|+|+++++++|+..|
T Consensus 156 --------~~~~~~~~~y~~pe~~~~~~-----~~~~~Dv~~lG~~l~~l~~g 195 (254)
T cd06627 156 --------DASVVGTPYWMAPEVIEMSG-----ASTASDIWSLGCTVIELLTG 195 (254)
T ss_pred --------ccccccchhhcCHhhhcCCC-----CCcchhHHHHHHHHHHHHhC
Confidence 11224455677787664322 45778999999999999998
No 283
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.1e-30 Score=233.39 Aligned_cols=202 Identities=20% Similarity=0.246 Sum_probs=160.0
Q ss_pred eeeccc--CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTG--NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G--~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
..||+| +||+||++.+.. +++.||+|++..........+.+.+|+.+++.++||||+++++++..++..++||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTP-TGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcC-CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 999999998876 79999999997655455666789999999999999999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++.......+++..+..++.||+.||.|||+.||+||||||+|||++.++.++++||+.+............ .
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 161 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV-V 161 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc-c
Confidence 999999987654556899999999999999999999999999999999999999999999999876433211110000 0
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.. ......+...|++||+...+... .....|+|+++++++|+..|-
T Consensus 162 ~~--~~~~~~~~~~y~aPE~~~~~~~~---~~~~~DiwslG~~l~el~~g~ 207 (328)
T cd08226 162 YD--FPQFSTSVLPWLSPELLRQDLYG---YNVKSDIYSVGITACELATGR 207 (328)
T ss_pred cc--ccccccCccCccChhhhcCCCCC---CCchhhHHHHHHHHHHHHhCC
Confidence 00 00111234558889887543222 347899999999999999983
No 284
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=4.1e-30 Score=222.96 Aligned_cols=195 Identities=23% Similarity=0.327 Sum_probs=162.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh---hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL---LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
+|++.+.||+|+||+||+|.... +++.|++|.+.... ...+..+.+.+|+.+++.++|+||+++++++.....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLD-DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcC-CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence 47788899999999999998876 68899999986543 123456788999999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
++||+++++|.+++... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 80 FLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 99999999999999653 5688999999999999999999999999999999999999999999999999876533220
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.....++..|++||+..... ......|+|+++++++|+..|
T Consensus 158 -----------~~~~~~~~~y~~pe~~~~~~----~~~~~~D~~slG~~l~~l~~g 198 (258)
T cd06632 158 -----------AKSFKGSPYWMAPEVIAQQG----GYGLAADIWSLGCTVLEMATG 198 (258)
T ss_pred -----------ccccCCCcceeCHHHhcCCC----CCCchhhhHHHHHHHHHHHhC
Confidence 01123445577777654322 246778999999999999998
No 285
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=2.1e-30 Score=225.01 Aligned_cols=185 Identities=21% Similarity=0.208 Sum_probs=150.1
Q ss_pred eeecccCCeEEEEEEEcCCCC----------ceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 106 RHLGTGNLGRVFLCHLRDCTS----------ANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
+.||+|+||.||+|.+.. ++ ..+++|++.... .....+.+|+.+++.++|+||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRV-QSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEec-cCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 358999999999999876 33 357778765442 115678889999999999999999999887 778
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-------cEEEeeecc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-------HIMLSDFDL 248 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-------~~kl~DFG~ 248 (317)
++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999999997642 2689999999999999999999999999999999999999887 799999999
Q ss_pred cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
+....... ...+...|++||+..... .......|+|+++++++|+..|
T Consensus 155 a~~~~~~~--------------~~~~~~~y~aPE~~~~~~---~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 155 PITVLSRE--------------ERVERIPWIAPECIRNGQ---ASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred cccccccc--------------ccccCCCccChhhhcCCC---CCcchhhHHHHHHHHHHHHHhC
Confidence 97654311 112334578888765432 2345778999999999998774
No 286
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=218.42 Aligned_cols=212 Identities=19% Similarity=0.171 Sum_probs=165.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE-----
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE----- 170 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 170 (317)
.++.++|+|.+.||+|||+-||+++... +++.+|+|.+... ..+..+..++|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s-~~~~YAlKkI~c~--~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLS-TGHLYALKKILCH--SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccC-cccchhhheeecc--chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 5777899999999999999999998766 8899999999876 3567788999999999999999999987753
Q ss_pred ecCEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeee
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~~kl~DF 246 (317)
.....|++++|+..|+|.+.+... .+..+++.+++.|+.+|++||++||+.. ++||||||.|||+...+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 345699999999999999998754 3446899999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
|.+.+..-.-... +..-.-........+--|.+||--....+. .-..+.|+||+||+++++.=|
T Consensus 174 GS~~~a~i~i~~~-~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~--ti~ertDIWSLGCtLYa~mf~ 237 (302)
T KOG2345|consen 174 GSATQAPIQIEGS-RQALRLQEWAEERCTIPYRAPELFNVKSHC--TITERTDIWSLGCTLYAMMFG 237 (302)
T ss_pred cCccccceEeech-HHHHHHHHHHHHhCCCcccCchheecccCc--ccccccchhhhhHHHHHHHHc
Confidence 9987654311100 000000111112223346666654333222 235788999999999987655
No 287
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=4e-30 Score=224.36 Aligned_cols=188 Identities=16% Similarity=0.161 Sum_probs=149.5
Q ss_pred eecccCCeEEEEEEEcCC-----------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 107 HLGTGNLGRVFLCHLRDC-----------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
.||+|+||.||+|..... ....|++|++... .......+.+|+.+++.++||||+++++++..+...
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 589999999999975421 1235888887654 234445778899999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc-------EEEeeecc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH-------IMLSDFDL 248 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~-------~kl~DFG~ 248 (317)
++||||+++++|..++... ...+++..++.++.||+.||.|||+++|+||||||+|||++.++. ++++|||+
T Consensus 80 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 9999999999998887543 356899999999999999999999999999999999999987664 89999999
Q ss_pred cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC-CC-CC
Q 042913 249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP-GG-VP 315 (317)
Q Consensus 249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~G-~p 315 (317)
+........ ..+...|++||..... .....++|+|+++++++|+. .| .|
T Consensus 159 ~~~~~~~~~--------------~~~~~~y~aPE~~~~~----~~~~~~~DiwslG~~l~el~~~~~~p 209 (262)
T cd05077 159 PITVLSRQE--------------CVERIPWIAPECVEDS----KNLSIAADKWSFGTTLWEICYNGEIP 209 (262)
T ss_pred CccccCccc--------------ccccccccChhhhcCC----CCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 865432211 1234568888876421 22356789999999999986 45 54
No 288
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=3.8e-30 Score=227.95 Aligned_cols=199 Identities=17% Similarity=0.235 Sum_probs=158.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCE----
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHY---- 174 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~---- 174 (317)
++|++.+.||+|+||.||+|.+.. +++.||+|.+............+.+|+.+++.+. |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKN-TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECC-CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 468999999999999999999877 7899999998765433334467788999999995 6999999999876655
Q ss_pred -EEEEEcccCCCChhcccccCC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeeccc
Q 042913 175 -ICFLIDYCPNGDLHSLLPKQP---NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLC 249 (317)
Q Consensus 175 -~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a 249 (317)
.|+||||++ ++|.+++.... ...+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 899999996 58888875432 346899999999999999999999999999999999999998 889999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
+.+...... .....+...|.+||+.... .....+.|+|+++++++|+..|-
T Consensus 159 ~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~----~~~~~~~Di~slG~~l~~l~~g~ 209 (295)
T cd07837 159 RAFSIPVKS----------YTHEIVTLWYRAPEVLLGS----THYSTPVDIWSVGCIFAEMSRKQ 209 (295)
T ss_pred eecCCCccc----------cCCcccccCCCChHHhhCC----CCCCchHHHHHHHHHHHHHHcCC
Confidence 765332110 0111234567888866421 12246789999999999999984
No 289
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=4.5e-30 Score=224.71 Aligned_cols=200 Identities=19% Similarity=0.243 Sum_probs=158.5
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
+...+|.+.+.||+|+||.||+|.+... ....|++|...... .....+.+.+|+.+++.++|+||+++++++.. ..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 4557899999999999999999987642 23578999886543 24455788999999999999999999998875 45
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.|+||||+++++|.+++... ...+++..++.++.||+.||.|||+.+++|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 78999999999999999654 24589999999999999999999999999999999999999999999999999976544
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP-GG 313 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~G 313 (317)
......+ .......|++||+.. ........|+|+++++++|+. .|
T Consensus 160 ~~~~~~~---------~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 160 ESYYKAS---------KGKLPIKWMAPESIN-----FRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred ccceecC---------CCCccccccChhhhc-----cCCCCchhhhHHHHHHHHHHHHcC
Confidence 3211110 011223467777553 233457799999999999966 46
No 290
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=3.1e-30 Score=233.07 Aligned_cols=200 Identities=18% Similarity=0.221 Sum_probs=159.4
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----C
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----H 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 173 (317)
.++|++.+.||+|+||.||+|.+.. +++.||+|++.... .......+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKP-TGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcC-CCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 3689999999999999999998876 78999999986432 234456678899999999999999999886543 3
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
..|+|+||+ .++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELM-ETDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 589999999 5688877743 568999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....... ......++..|++||.... ........|+|+++++++|+..|-|
T Consensus 158 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~~DvwslGvil~el~~G~~ 208 (336)
T cd07849 158 PEHDHTG-------FLTEYVATRWYRAPEIMLN----SKGYTKAIDIWSVGCILAEMLSNRP 208 (336)
T ss_pred ccccccC-------CcCCcCcCCCccChHHhhC----CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 3221110 0111234556788876532 2234678999999999999999943
No 291
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=3.5e-30 Score=226.21 Aligned_cols=186 Identities=19% Similarity=0.180 Sum_probs=147.4
Q ss_pred eecccCCeEEEEEEEcCC-----------------------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcc
Q 042913 107 HLGTGNLGRVFLCHLRDC-----------------------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLP 163 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~-----------------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 163 (317)
.||+|+||.||+|..... ....|++|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999975321 1235888888654 234446788899999999999999
Q ss_pred eEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----
Q 042913 164 TLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---- 239 (317)
Q Consensus 164 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---- 239 (317)
++++++......++||||+++++|..++... ...+++..+..++.||+.||.|||+++|+||||||+|||++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999988643 35689999999999999999999999999999999999997644
Q ss_pred ---cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccccc-CCC
Q 042913 240 ---HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ-PGG 313 (317)
Q Consensus 240 ---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~G 313 (317)
.++|+|||++........ ..+...|++||+.... .....+.|+|+++++++|+ ..|
T Consensus 159 ~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~aPe~~~~~----~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSREE--------------RVERIPWIAPECVPGG----NSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred ccceeeecCCccccccccccc--------------cccCCcccCchhhcCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence 489999999764322111 1233457888866432 3346789999999999997 455
No 292
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=5.4e-30 Score=222.80 Aligned_cols=197 Identities=19% Similarity=0.283 Sum_probs=164.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE--ecCEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE--VSHYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv 178 (317)
+|++.+.||.|+||.||++.+.. ++..||+|++..........+.+.+|+++++.++|+||+++++++. .....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKS-DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecC-CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999998877 7889999999776556666778899999999999999999999775 34668999
Q ss_pred EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLH-----ALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH-----~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998643 2457899999999999999999999 89999999999999999999999999999987
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
......... ...++..|++||...... .....|+|+++.+++|+..|
T Consensus 160 ~~~~~~~~~----------~~~~~~~~~~pE~~~~~~-----~~~~~Dv~slG~il~~l~~g 206 (265)
T cd08217 160 LGHDSSFAK----------TYVGTPYYMSPEQLNHMS-----YDEKSDIWSLGCLIYELCAL 206 (265)
T ss_pred ccCCccccc----------ccccCCCccChhhhcCCC-----CCchhHHHHHHHHHHHHHHC
Confidence 654332111 113455678887764332 45678999999999999988
No 293
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=3.8e-30 Score=223.15 Aligned_cols=190 Identities=22% Similarity=0.288 Sum_probs=156.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..++|++.+.||+|+||.||++.. .++.||+|.+.... ....+.+|+.+++.++|+||+++++++..+ ..++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~---~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY---TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc---CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 457899999999999999999864 46889999986542 235678899999999999999999998754 4799
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++.......+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence 99999999999999765555689999999999999999999999999999999999999999999999999875432110
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.......|.+||+... .....+.|+|+++++++|+.. |
T Consensus 156 -------------~~~~~~~y~~pe~~~~-----~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 156 -------------NSKLPVKWTAPEALKH-----KKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred -------------CCCCCceecCHHHhcc-----CCcCchhhHHHHHHHHHHHHhCC
Confidence 0011245777776542 334578899999999999875 6
No 294
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.1e-30 Score=227.61 Aligned_cols=196 Identities=26% Similarity=0.346 Sum_probs=166.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||++.+.. +++.+++|.+..... ......+.+|+++++.++||||+++++.+...+.+++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRP-TGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcC-CCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 467888899999999999999876 789999999876532 355577889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||+++++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.........
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 9999999999996543 678999999999999999999999 99999999999999999999999999998655321110
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...+...|++||+.... ....+.|+|+++++++|+..| .|
T Consensus 158 ------------~~~~~~~y~~PE~~~~~-----~~~~~~Dv~slG~~l~~l~~g~~p 198 (265)
T cd06605 158 ------------TFVGTSSYMAPERIQGN-----DYSVKSDIWSLGLSLIELATGRFP 198 (265)
T ss_pred ------------cccCChhccCHHHHcCC-----CCCchhhHHHHHHHHHHHHhCCCC
Confidence 13455678888876544 445779999999999999998 44
No 295
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-30 Score=237.03 Aligned_cols=218 Identities=29% Similarity=0.456 Sum_probs=175.5
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehh-hhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKD-LLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
.++...-|..++.||-|+||.|.++.-.+ +...+|+|.+++. .+.......++.|..||..-+.+-||+||-.|.+.+
T Consensus 624 aKMdKSmFvkik~iGvGAFGeV~Lv~KvD-T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 624 AKMDKSMFVKIKTIGVGAFGEVCLVRKVD-TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD 702 (1034)
T ss_pred hhccccceEEEeeecccccceeEEEeecc-hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC
Confidence 35566789999999999999999998777 7889999999764 445567788999999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|+||+|++||++-.+|-+ .+.|++..++.++..+.+|+++.|..|+|||||||+|||||.+|++||.|||||.-+.
T Consensus 703 nLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred ceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccce
Confidence 99999999999999999855 4889999999999999999999999999999999999999999999999999994332
Q ss_pred C----------CCCeeec-----------ccccccccc-----cc-cccCCCCCcccccccccceeccchhhhccCCccc
Q 042913 254 V----------VPTLVET-----------NVGSATRRR-----RR-KSCNGFGSAKRRQENVMEFVAEPRREQREHPAQY 306 (317)
Q Consensus 254 ~----------~~~~~~~-----------~~~~~~~~~-----~~-~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (317)
= +...... .+-..-+++ ++ ....-.|+|-|+.+++.......-.+|-|+-+.+
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 1 1110000 111111111 11 1112347777777777777777788999999999
Q ss_pred ccccCCCCC
Q 042913 307 SVEQPGGVP 315 (317)
Q Consensus 307 ~~e~~~G~p 315 (317)
+.|+.-|.|
T Consensus 861 l~em~~g~~ 869 (1034)
T KOG0608|consen 861 LYEMLVGQP 869 (1034)
T ss_pred HHHHhhCCC
Confidence 999999943
No 296
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=4.7e-30 Score=224.77 Aligned_cols=199 Identities=22% Similarity=0.254 Sum_probs=153.8
Q ss_pred eEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC------
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH------ 173 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 173 (317)
|++.+.||+|+||.||+|.+.. .++..||||++..........+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678889999999999998653 24689999999876656666778899999999999999999999875432
Q ss_pred EEEEEEcccCCCChhcccccC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 174 YICFLIDYCPNGDLHSLLPKQ----PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
..+++++|+.+++|.+++... ....+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 247889999999998876421 1234788999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
+............ .......|++||.. ........+|+|+++++++|+.. |
T Consensus 161 ~~~~~~~~~~~~~--------~~~~~~~~~~pe~~-----~~~~~~~~sDi~slG~il~el~~~g 212 (273)
T cd05074 161 KKIYSGDYYRQGC--------ASKLPVKWLALESL-----ADNVYTTHSDVWAFGVTMWEIMTRG 212 (273)
T ss_pred ccccCCcceecCC--------CccCchhhcCHhHH-----hcCccchhhhhHHHHHHHHHHhhCC
Confidence 8654322110000 01112234555543 33334567899999999999887 6
No 297
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=4.2e-30 Score=228.93 Aligned_cols=202 Identities=20% Similarity=0.259 Sum_probs=158.6
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|.+.. ++. .+|+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEec-CCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 456789999999999999999998765 344 57888886543 233345688899999999999999999988654
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..++++||+++|+|.+++... ...+++..++.++.||+.||.|||+++|+|+||||+||+++.++.+||+|||+++..
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 467999999999999998654 345889999999999999999999999999999999999999999999999999866
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC--CCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG--GVP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--G~p 315 (317)
......... ........|++||+.. ......+.|+|+++++++|+.. +.|
T Consensus 160 ~~~~~~~~~--------~~~~~~~~y~~PE~~~-----~~~~~~~~DiwslG~~l~el~t~g~~p 211 (303)
T cd05110 160 EGDEKEYNA--------DGGKMPIKWMALECIH-----YRKFTHQSDVWSYGVTIWELMTFGGKP 211 (303)
T ss_pred cCccccccc--------CCCccccccCCHHHhc-----cCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 432221110 0112234577777553 3345678899999999999864 465
No 298
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=5.7e-30 Score=225.31 Aligned_cols=190 Identities=29% Similarity=0.472 Sum_probs=150.8
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHH---HHHHHhcCCCCcceEEEEEEecCEEEEEEccc
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQME---AEILSMLDHPFLPTLYAHLEVSHYICFLIDYC 182 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E---~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 182 (317)
.||+|+||.||+|.... +++.||+|.+.+..... .....+..| +.+++...|++|+.+++.+...+.+|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEec-CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 38999999999998876 78999999987643221 111222333 34455567999999999999999999999999
Q ss_pred CCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecc
Q 042913 183 PNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 183 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
.+++|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||+++.......
T Consensus 80 ~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~----- 152 (278)
T cd05606 80 NGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----- 152 (278)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-----
Confidence 99999998854 36799999999999999999999999999999999999999999999999999875532211
Q ss_pred cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
....++..|++||....+ .....+.|+|+++++++|+..| .|
T Consensus 153 -------~~~~~~~~y~aPE~~~~~----~~~~~~~Di~s~G~~l~~l~~g~~p 195 (278)
T cd05606 153 -------HASVGTHGYMAPEVLQKG----VAYDSSADWFSLGCMLFKLLRGHSP 195 (278)
T ss_pred -------cCcCCCcCCcCcHHhcCC----CCCCcccchHhHHHHHHHHHhCCCC
Confidence 012355678888876432 2245678999999999999999 44
No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=4.9e-30 Score=225.89 Aligned_cols=188 Identities=29% Similarity=0.469 Sum_probs=150.2
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHH---hcCCCCcceEEEEEEecCEEEEEEccc
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILS---MLDHPFLPTLYAHLEVSHYICFLIDYC 182 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~---~l~h~~iv~~~~~~~~~~~~~lv~e~~ 182 (317)
.||+|+||.||++.+.. +++.+|+|.+.+..... .......+|..+++ ..+|+||+.+++.+...+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECC-CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 38999999999998876 78999999987653322 22223344444433 447999999999999999999999999
Q ss_pred CCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecc
Q 042913 183 PNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 183 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
++++|.+++... +.+++..+..++.|++.||.|||+.+|+||||||+|||++.++.++|+|||++........
T Consensus 80 ~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~----- 152 (279)
T cd05633 80 NGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----- 152 (279)
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-----
Confidence 999999988653 5699999999999999999999999999999999999999999999999999875532211
Q ss_pred cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....++..|++||.... ......+.|+|+++++++|+..|
T Consensus 153 -------~~~~~~~~y~aPE~~~~----~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 153 -------HASVGTHGYMAPEVLQK----GTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred -------cCcCCCcCccCHHHhcC----CCCCCchhhhHHHHHHHHHHHhC
Confidence 11245667888887642 22345778999999999999998
No 300
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=4e-30 Score=223.03 Aligned_cols=197 Identities=21% Similarity=0.340 Sum_probs=165.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|.+.+.||+|+||.||++.... ++..+|+|.+..........+.+.+|+.+++.++|+||+++++.+......++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKS-DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcC-CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58899999999999999999887 78899999997754444555678899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCCCCee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~~~~~ 259 (317)
|+++++|.+++.+.....+++..++.++.||+.||.|||+.+++|+||||+||+++.++ .++|+|||.+..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 99999999999765555689999999999999999999999999999999999999875 57999999997664322211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
. ...+...|++||+.... ....+.|+|+++++++|+..|
T Consensus 160 ~----------~~~~~~~~~ape~~~~~-----~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 160 Y----------TCVGTPYYLSPEICQNR-----PYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred c----------ccCCCccccCHHHHcCC-----CCCchhhHHHHHHHHHHHHhC
Confidence 1 12345567888865432 234679999999999999988
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=6.8e-30 Score=224.56 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=162.0
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
-|++.+.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+++++.++|+||+++++.+..+..+|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~-~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECC-CCcEEEEEEecccc-chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 47788899999999999998776 68899999986543 23445678899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.. ..+++..+..++.|++.+|.|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~-- 157 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-- 157 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh--
Confidence 9999999999853 45899999999999999999999999999999999999999999999999998765432211
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|++||+... ......+|+|+++++++|+..|.
T Consensus 158 --------~~~~~~~~~y~~PE~~~~-----~~~~~~~Dv~slG~~l~~l~~g~ 198 (277)
T cd06641 158 --------RNTFVGTPFWMAPEVIKQ-----SAYDSKADIWSLGITAIELAKGE 198 (277)
T ss_pred --------hccccCCccccChhhhcc-----CCCCchhhHHHHHHHHHHHHcCC
Confidence 111234556788887643 23456789999999999999993
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=3.9e-30 Score=226.53 Aligned_cols=198 Identities=19% Similarity=0.259 Sum_probs=163.3
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|++.+.||.|++|.||+|.+.. ++..||+|++............+.+|+++++.++|+|++++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKL-TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcC-CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6778899999999999999876 789999999976543444446678899999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
+ +++|.+++.......+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||+++........
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--- 155 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT--- 155 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc---
Confidence 9 578999987654457899999999999999999999999999999999999999999999999999765432111
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....++..|++||+..... ....+.|+|++|++++|+..|-|
T Consensus 156 -------~~~~~~~~~~~aPE~~~~~~----~~~~~~Di~slG~~l~~l~~g~~ 198 (283)
T cd07835 156 -------YTHEVVTLWYRAPEILLGSR----QYSTPVDIWSIGCIFAEMVNRRP 198 (283)
T ss_pred -------cCccccccCCCCCceeecCc----ccCcHHHHHHHHHHHHHHHhCCC
Confidence 01113356688888764321 22467899999999999999943
No 303
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=1e-29 Score=223.61 Aligned_cols=205 Identities=18% Similarity=0.187 Sum_probs=164.5
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCC---CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-c
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDC---TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-S 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~ 172 (317)
+..++|++.+.||+|+||.||+|.+... .+..|++|.+... ........+.+|+.+++.++|+||+++++++.. +
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4568899999999999999999987752 2678999988643 245556788999999999999999999998765 5
Q ss_pred CEEEEEEcccCCCChhcccccCCC------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPN------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
...+++++|+.+++|.+++..... ..+++..++.++.||+.||+|||+.+++|+||||+||+++.++.+||+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCC
Confidence 778999999999999999865322 45899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
|+++.+......... . ...+...|++||+.... ....++|+|+++++++|+.. | .|
T Consensus 162 g~~~~~~~~~~~~~~---~-----~~~~~~~y~apE~~~~~-----~~~~~~Di~slG~~l~el~~~g~~p 219 (280)
T cd05043 162 ALSRDLFPMDYHCLG---D-----NENRPVKWMALESLVNK-----EYSSASDVWSFGVLLWELMTLGQTP 219 (280)
T ss_pred CCcccccCCceEEeC---C-----CCCcchhccCHHHHhcC-----CCCchhhHHHhHHHHHHHhcCCCCC
Confidence 999876443221110 0 11223458888876433 23577899999999999986 6 44
No 304
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=5.7e-30 Score=225.03 Aligned_cols=195 Identities=24% Similarity=0.343 Sum_probs=163.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..|++.+.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.+.|+||+++++.+..++..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNR-TQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEcc-CCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 357788889999999999998876 68899999987543 2345578899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.........
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 157 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK- 157 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc-
Confidence 99999999999854 45889999999999999999999999999999999999999999999999999765432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|.+||+... .....+.|+|+++++++|+..|.
T Consensus 158 ---------~~~~~~~~~y~apE~~~~-----~~~~~~~Dv~slG~il~el~tg~ 198 (277)
T cd06640 158 ---------RNTFVGTPFWMAPEVIQQ-----SAYDSKADIWSLGITAIELAKGE 198 (277)
T ss_pred ---------cccccCcccccCHhHhcc-----CCCccHHHHHHHHHHHHHHHHCC
Confidence 111234556777877643 33567899999999999999994
No 305
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=240.15 Aligned_cols=191 Identities=23% Similarity=0.318 Sum_probs=161.8
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY 174 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 174 (317)
..+......-++-||.|+.|.||+|+.+. +.||||.++.- -..+|+-|++|+|+||+.|.|+|...-.
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~n---etVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLHN---ETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeeccC---ceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCce
Confidence 34444555567889999999999999885 89999987421 2347888999999999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|||||||..|.|+.+|+. +..+.......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++.+..
T Consensus 187 yCIiMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eEEeeeccccccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999999999965 57889999999999999999999999999999999999999999999999999988766
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
..+ -+.++ |+-.||+||.+..+- ...+.|+|+-+.+++|+.+| .|
T Consensus 265 ~ST-kMSFa----------GTVaWMAPEvIrneP-----csEKVDIwSfGVVLWEmLT~EiP 310 (904)
T KOG4721|consen 265 KST-KMSFA----------GTVAWMAPEVIRNEP-----CSEKVDIWSFGVVLWEMLTGEIP 310 (904)
T ss_pred hhh-hhhhh----------hhHhhhCHHHhhcCC-----cccccceehhHHHHHHHHhcCCC
Confidence 532 33444 455799999876442 24577899999999999998 55
No 306
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=9.3e-30 Score=220.82 Aligned_cols=195 Identities=23% Similarity=0.298 Sum_probs=159.4
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|++.+.||+|+||.||++.+.. +..+|+|.+....... ..+.+|+++++.++||||+++++++......++|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~~~~~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE--KRKVAIKTIREGAMSE---EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC--CCeEEEEECCCCCCCH---HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 4688999999999999999998764 6789999987543332 4577899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++... ...+++..++.++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||+++........
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 78 FEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred EEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 9999999999998654 245889999999999999999999999999999999999999999999999998765322110
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
. ........+|++||+...+ .....+|+|+++++++|+.. |
T Consensus 157 --~-------~~~~~~~~~~~aPe~~~~~-----~~~~~~Dv~slG~~l~el~~~g 198 (256)
T cd05112 157 --S-------STGTKFPVKWSSPEVFSFS-----KYSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred --c-------cCCCccchhhcCHhHhccC-----CcChHHHHHHHHHHHHHHHcCC
Confidence 0 0011223468888876543 24467899999999999886 6
No 307
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=7.2e-30 Score=224.87 Aligned_cols=198 Identities=20% Similarity=0.266 Sum_probs=160.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||.|++|.||+|.+.. ++..||+|++..... ......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRT-TGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECC-CCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999876 789999999876532 2234566789999999999999999999999999999999
Q ss_pred ccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 181 YCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
|++ ++|.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++........
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~- 156 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT- 156 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc-
Confidence 996 58888775432 346899999999999999999999999999999999999999999999999999755332110
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.....++..|++||....+ .....+.|+|++|++++|+..|.|
T Consensus 157 ---------~~~~~~~~~y~~PE~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~ 199 (284)
T cd07836 157 ---------FSNEVVTLWYRAPDVLLGS----RTYSTSIDIWSVGCIMAEMITGRP 199 (284)
T ss_pred ---------cccccccccccChHHhcCC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0111334568888866432 123567899999999999999943
No 308
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=5.3e-30 Score=229.17 Aligned_cols=203 Identities=18% Similarity=0.197 Sum_probs=158.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCC-CCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDC-TSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HYIC 176 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 176 (317)
+|++.+.||+|+||.||+|..... .++.||+|.+..... .......+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 588999999999999999987653 578999999976421 123345678899999999999999999999887 8899
Q ss_pred EEEcccCCCChhcccccC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc----CCcEEEeeeccc
Q 042913 177 FLIDYCPNGDLHSLLPKQ---PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE----DGHIMLSDFDLC 249 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~----~~~~kl~DFG~a 249 (317)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||+.+|+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5676665422 1236899999999999999999999999999999999999999 899999999999
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
+......... .......+...|++||..... .......|+|++|++++|+..|.|
T Consensus 160 ~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~~l~~~~~ 214 (316)
T cd07842 160 RLFNAPLKPL-------ADLDPVVVTIWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTLEP 214 (316)
T ss_pred cccCCCcccc-------cccCCccccccccCHHHHhCC----CCCCcHHHHHHHHHHHHHHHhcCC
Confidence 8664432210 011112344557888765321 123567899999999999999854
No 309
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-30 Score=217.54 Aligned_cols=204 Identities=23% Similarity=0.342 Sum_probs=173.6
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 175 (317)
+..-.|+|+++||+|+||.+++|...- +++.||||.-... ....++..|.+..+.|. .++|..+|-+...+.+.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~-nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLY-NNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccc-cCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 555689999999999999999998776 7899999987544 23356677888888775 78999999888888889
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-----cEEEeeecccc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-----HIMLSDFDLCF 250 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-----~~kl~DFG~a~ 250 (317)
.||+|++ |-+|.|++.- .+..|+.++++.++.|++.-++|+|++.+|.|||||+|+||...+ .+.|+|||+|+
T Consensus 100 iLVidLL-GPSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhhh-CcCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 9999999 9999998853 468899999999999999999999999999999999999997543 69999999999
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
++....+. .-..+++.-.--|+.+|++.|.+-+.|++||+|+++++-+.++|..| ||
T Consensus 178 ~YrDp~Tk--------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLP 235 (449)
T KOG1165|consen 178 EYRDPKTK--------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 235 (449)
T ss_pred hhcCcccc--------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCc
Confidence 98765542 11223344445689999999999999999999999999999999999 87
No 310
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=8.8e-30 Score=221.63 Aligned_cols=197 Identities=24% Similarity=0.347 Sum_probs=167.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|++|.||+|.+.. +++.|++|++...... .....+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKP-TGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcC-CCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 468999999999999999999887 7899999998765432 55678899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||+++++|.+++... ..+++..++.++.||+.+|.|||+ .+++|+||+|+||+++.++.++|+|||++.........
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999999999654 678999999999999999999999 99999999999999999999999999998765432221
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
. ....+...|++||+.... ..+...|+|+++++++|+..| .|
T Consensus 157 ~----------~~~~~~~~y~~pE~~~~~-----~~~~~~Dv~slG~il~~l~tg~~p 199 (264)
T cd06623 157 C----------NTFVGTVTYMSPERIQGE-----SYSYAADIWSLGLTLLECALGKFP 199 (264)
T ss_pred c----------cceeecccccCHhhhCCC-----CCCchhhHHHHHHHHHHHHhCCCC
Confidence 1 111344567788776443 456789999999999999998 44
No 311
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=6.6e-30 Score=224.64 Aligned_cols=205 Identities=21% Similarity=0.237 Sum_probs=160.1
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
+..++|++.+.||+|+||.||+|.+... .+..|++|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3456799999999999999999987641 35789999886442 233445688899999999999999999999988
Q ss_pred CEEEEEEcccCCCChhcccccCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEe
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQP-----NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIMLS 244 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl~ 244 (317)
+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+++++|+||||+|||++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 89999999999999999986532 12588999999999999999999999999999999999998654 69999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
|||+++........... ........|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 162 dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~~g~~p 221 (277)
T cd05036 162 DFGMARDIYRASYYRKG--------GRAMLPIKWMPPEAFLD-----GIFTSKTDVWSFGVLLWEIFSLGYMP 221 (277)
T ss_pred cCccccccCCccceecC--------CCCCccHhhCCHHHHhc-----CCcCchhHHHHHHHHHHHHHcCCCCC
Confidence 99999876322211000 00011235777777643 234578999999999999775 6 44
No 312
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=7.3e-30 Score=231.34 Aligned_cols=195 Identities=23% Similarity=0.284 Sum_probs=161.5
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH---- 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 173 (317)
..++|++++.||+|+||.||++.... ++..||+|++............+.+|+++++.++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECC-CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35789999999999999999998876 7899999998654434445567889999999999999999999886543
Q ss_pred --EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 174 --YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 174 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
.+++||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 468999999 8899888753 4689999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...... ...++..|++||..... .......|+|+++++++|+..|-
T Consensus 168 ~~~~~~-------------~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~ll~~l~~g~ 213 (343)
T cd07880 168 TDSEMT-------------GYVVTRWYRAPEVILNW----MHYTQTVDIWSVGCIMAEMLTGK 213 (343)
T ss_pred cccCcc-------------ccccCCcccCHHHHhCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence 533211 11335568888876432 12457799999999999999994
No 313
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=5.4e-30 Score=226.41 Aligned_cols=202 Identities=22% Similarity=0.287 Sum_probs=159.8
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..++|++.+.||+|+||.||+|.+.. .++..||+|++.... .......+.+|+.+++.++||||+++++++..+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 45789999999999999999998642 256889999987543 3344567889999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913 174 YICFLIDYCPNGDLHSLLPKQP--------------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI 233 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~--------------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni 233 (317)
..+++|||+++++|.+++.... ...+++..++.++.||+.||.|||+++++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 9999999999999999986421 12467888999999999999999999999999999999
Q ss_pred EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-
Q 042913 234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG- 312 (317)
Q Consensus 234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~- 312 (317)
+++.++.++|+|||+++........... ........|++||... ......+.|+|+++++++|+..
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~~ 228 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKAS--------ENDAIPIRWMPPESIF-----YNRYTTESDVWAYGVVLWEIFSY 228 (288)
T ss_pred EecCCCceEECccccceecccCcccccc--------CCCccChhhcCHHHHh-----cCCCCchhHHHHHHHHHHHHHhC
Confidence 9999999999999998765332210000 0001122466676543 3334577899999999999875
Q ss_pred C
Q 042913 313 G 313 (317)
Q Consensus 313 G 313 (317)
|
T Consensus 229 ~ 229 (288)
T cd05050 229 G 229 (288)
T ss_pred C
Confidence 6
No 314
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.6e-30 Score=221.96 Aligned_cols=197 Identities=24% Similarity=0.297 Sum_probs=160.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCC---CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCT---SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
+++.+.||.|+||.||++.+.... +..||+|++.... .......+..|+.+++.++|+||+++++++...+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 356788999999999999887622 3889999996553 233567889999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+++++|.+++.......+++..+..++.||+.||.|||+.+++|+||||+||+++.++.++|+|||+++........
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 99999999999997653333899999999999999999999999999999999999999999999999999776543211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G 313 (317)
.. ....+...|++||+.. ........|+|+++++++|+.. |
T Consensus 160 ~~---------~~~~~~~~y~~Pe~~~-----~~~~~~~~Di~slG~i~~~l~~~g 201 (258)
T smart00219 160 KK---------KGGKLPIRWMAPESLK-----DGKFTSKSDVWSFGVLLWEIFTLG 201 (258)
T ss_pred cc---------ccCCCcccccChHHhc-----cCCCCcchhHHHHHHHHHHHHhCC
Confidence 10 0112345677777653 2334578999999999999976 5
No 315
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=3.1e-30 Score=232.94 Aligned_cols=202 Identities=19% Similarity=0.260 Sum_probs=161.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE----ecCEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE----VSHYI 175 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 175 (317)
++|.+.+.||+|+||.||+|.... +++.||+|++............+.+|+.+++.++|+||+++++++. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTR-SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcC-CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 689999999999999999998887 7899999998765433345567788999999999999999998875 34578
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||||+ +++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 5789998854 356999999999999999999999999999999999999999999999999998765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..... .......+...|.+||..... .....+.|+|++|++++|+..|-|
T Consensus 161 ~~~~~------~~~~~~~~~~~y~~PE~~~~~----~~~~~~~Di~slG~~l~el~~g~~ 210 (334)
T cd07855 161 PTEHK------YFMTEYVATRWYRAPELLLSL----PEYTTAIDMWSVGCIFAEMLGRRQ 210 (334)
T ss_pred CcCCC------cccccccccccccChHHhcCC----cccccccchHHHHHHHHHHHcCCC
Confidence 21100 000112345567788865321 224577999999999999998843
No 316
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=5.3e-30 Score=225.02 Aligned_cols=194 Identities=22% Similarity=0.334 Sum_probs=161.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC---CCCcceEEEEEEecCEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~l 177 (317)
.|++.+.||+|+||.||+|.+.. +++.|++|.+.... .......+.+|+.+++.++ |+|++++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVP-TGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcC-CCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 47788899999999999999876 78999999986543 2344567888999999986 9999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++.. ..+++..++.++.|++.+|.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 80 IMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 9999999999999854 3689999999999999999999999999999999999999999999999999976644321
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
. .....+...|++||+...+ .....+.|+|+++++++|+..|
T Consensus 157 ~----------~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~~ll~g 198 (277)
T cd06917 157 K----------RSTFVGTPYWMAPEVITEG----KYYDTKADIWSLGITIYEMATG 198 (277)
T ss_pred c----------cccccCCcceeCHHHhccC----CccccchhHHHHHHHHHHHHhC
Confidence 1 1112345568888876432 2335678999999999999998
No 317
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=7.7e-30 Score=223.39 Aligned_cols=191 Identities=25% Similarity=0.346 Sum_probs=151.4
Q ss_pred eecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEEEEcccC
Q 042913 107 HLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
.||+|+||.||+|.+.. ++. .+++|.+... ........+.+|+++++++ +||||+++++++...+..|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~-~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcC-CCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999998876 444 4688887632 2334556788999999999 79999999999999999999999999
Q ss_pred CCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 184 NGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 184 ~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
+++|.+++.... ...+++..++.++.|++.||+|||+.|++||||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999986432 134789999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
+....... ......+..|++||+... .....+.|+|+++++++|+.. | .|
T Consensus 160 ~~~~~~~~-----------~~~~~~~~~y~apE~~~~-----~~~~~~~Di~slG~il~el~~~g~~p 211 (270)
T cd05047 160 RGQEVYVK-----------KTMGRLPVRWMAIESLNY-----SVYTTNSDVWSYGVLLWEIVSLGGTP 211 (270)
T ss_pred cccchhhh-----------ccCCCCccccCChHHHcc-----CCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 63221100 000112345888886632 234578999999999999984 5 44
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1.7e-29 Score=218.66 Aligned_cols=197 Identities=26% Similarity=0.363 Sum_probs=167.5
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 178 (317)
+|++.+.||+|++|.||+|.... +++.|++|++..........+.+.+|+++++.++|+||+++++.+... ..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKD-TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECC-CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47889999999999999999886 789999999977654456678899999999999999999999999988 899999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
+||+++++|.+++... ..+++..++.++.|++.+|.|||+.+++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999999999999664 47899999999999999999999999999999999999999999999999998776554321
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.......+...|.+||+.... ......|+|+++++++|+..|
T Consensus 158 --------~~~~~~~~~~~y~~pE~~~~~-----~~~~~~Dv~slG~il~~l~~g 199 (260)
T cd06606 158 --------EGTGSVRGTPYWMAPEVIRGE-----EYGRAADIWSLGCTVIEMATG 199 (260)
T ss_pred --------ccccCCCCCccccCHhhhcCC-----CCCchhhHHHHHHHHHHHHhC
Confidence 011122445566777765433 367889999999999999998
No 319
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=1.1e-29 Score=221.97 Aligned_cols=192 Identities=20% Similarity=0.277 Sum_probs=156.4
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
..||+|+||.||+|.+.. ++..|++|.+... .....+.+.+|+.+++.++|+||+++++++..++..++|+||++++
T Consensus 14 ~~lg~g~~g~v~~~~~~~-~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 90 (268)
T cd06624 14 VVLGKGTYGIVYAARDLS-TQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG 90 (268)
T ss_pred EEEecCCceEEEEeEecC-CCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence 459999999999998876 7889999988654 2344567899999999999999999999999999999999999999
Q ss_pred ChhcccccCCCCCC--CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCCCCCeeecc
Q 042913 186 DLHSLLPKQPNNRF--SLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVVPTLVETN 262 (317)
Q Consensus 186 sL~~~l~~~~~~~~--~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~~ 262 (317)
+|.+++.... ..+ ++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++.........
T Consensus 91 ~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~---- 165 (268)
T cd06624 91 SLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC---- 165 (268)
T ss_pred CHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc----
Confidence 9999986532 334 78888999999999999999999999999999999986 679999999998755322211
Q ss_pred cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 263 VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 263 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||+...+... .....|+|+++.+++|+..|.
T Consensus 166 ------~~~~~~~~~~~aPE~~~~~~~~---~~~~~Dv~slGvvl~~l~~g~ 208 (268)
T cd06624 166 ------TETFTGTLQYMAPEVIDKGPRG---YGAPADIWSLGCTIVEMATGK 208 (268)
T ss_pred ------cccCCCCccccChhhhcccccc---CCchhhhHHHHHHHHHHHhCC
Confidence 1112356678888886543222 235789999999999999884
No 320
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=1.2e-29 Score=220.91 Aligned_cols=189 Identities=32% Similarity=0.501 Sum_probs=157.8
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||.|+||.||+|.+.. +++.+++|++...... ....+.+.+|+.+++.++|+||+++++.+..+..+++++||+++++
T Consensus 1 lg~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKS-KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECC-CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 6899999999999887 7899999999765332 2445678999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++.+. ..+++..+..++.||+.||+|||+.+++|+||||+||+++.++.++|+|||+++.......
T Consensus 80 L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~--------- 148 (262)
T cd05572 80 LWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK--------- 148 (262)
T ss_pred HHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---------
Confidence 99999653 5689999999999999999999999999999999999999999999999999976643210
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.....+...|++||+... .......|+|+++++++|+..| .|
T Consensus 149 --~~~~~~~~~~~~PE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p 191 (262)
T cd05572 149 --TWTFCGTPEYVAPEIILN-----KGYDFSVDYWSLGILLYELLTGRPP 191 (262)
T ss_pred --cccccCCcCccChhHhcC-----CCCCChhhhhhhHHHHHHHHhCCCC
Confidence 011134456777876532 2235678999999999999998 44
No 321
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=8.6e-30 Score=222.89 Aligned_cols=198 Identities=16% Similarity=0.185 Sum_probs=150.8
Q ss_pred eecccCCeEEEEEEEcCC-CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 107 HLGTGNLGRVFLCHLRDC-TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
+||+|+||.||++..... ....+++|.+.... .....+.+.+|+.+++.++||||+++++.+......|+||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 599999999999976431 23456677665432 2345578899999999999999999999999999999999999999
Q ss_pred ChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 186 DLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 186 sL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+|.+++.... ...+++..++.++.||+.||+|||+.+++||||||+|||++.++.++|+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~----- 155 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI----- 155 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhh-----
Confidence 9999986532 234677788899999999999999999999999999999999999999999998542211110
Q ss_pred ccccccccccccCCCCCccccccccc--ceeccchhhhccCCcccccccCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVM--EFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.......+...|++||+...... ........+|+|+++++++|+..|
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 204 (268)
T cd05086 156 ---ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN 204 (268)
T ss_pred ---hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC
Confidence 00011233456888887643211 122446789999999999998743
No 322
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=1.1e-29 Score=221.09 Aligned_cols=196 Identities=19% Similarity=0.215 Sum_probs=150.5
Q ss_pred eecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE-ecCEEEEEEcccC
Q 042913 107 HLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE-VSHYICFLIDYCP 183 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~ 183 (317)
.||+|+||.||+|.+.. ..+..+|+|.+.... .......+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 58999999999998653 234579999885432 3345677889999999999999999999765 4566899999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++... .....+..+..++.||+.||.|||+.+++||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~-- 157 (262)
T cd05058 81 HGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH-- 157 (262)
T ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec--
Confidence 99999998654 234677788889999999999999999999999999999999999999999999765432211000
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GVP 315 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~p 315 (317)
......+...|++||+.. ......++|+|+++++++|+.. |.|
T Consensus 158 ----~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~~~~~ 201 (262)
T cd05058 158 ----NHTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRGAP 201 (262)
T ss_pred ----ccccCcCCccccChhHhc-----cCccchHHHHHHHHHHHHHHHcCCCC
Confidence 000112233567777553 3345678999999999999987 444
No 323
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=8.3e-30 Score=220.91 Aligned_cols=194 Identities=24% Similarity=0.350 Sum_probs=164.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
++|++.+.||+|+||.||+|.... +++.+++|.+..... ...+.+|+++++.++|+||+++++.+......|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKE-TGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcC-CCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 678999999999999999999887 688999999865421 578899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+.+++|.+++... ...+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.........
T Consensus 78 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~- 155 (256)
T cd06612 78 EYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK- 155 (256)
T ss_pred ecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc-
Confidence 999999999998643 356899999999999999999999999999999999999999999999999999876432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|.+||+.... ......|+|++|.+++|+..|.
T Consensus 156 ---------~~~~~~~~~y~~PE~~~~~-----~~~~~~Di~s~G~il~~l~~g~ 196 (256)
T cd06612 156 ---------RNTVIGTPFWMAPEVIQEI-----GYNNKADIWSLGITAIEMAEGK 196 (256)
T ss_pred ---------cccccCCccccCHHHHhcC-----CCCchhhHHHHHHHHHHHHhCC
Confidence 1112244568888876433 3456789999999999999983
No 324
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.7e-30 Score=228.25 Aligned_cols=195 Identities=22% Similarity=0.328 Sum_probs=162.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..|++.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+.+|+++++.++|+||+++++.+..++..|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNR-TKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcC-CCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 346677889999999999998876 68899999987543 2345567899999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.. ..+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++.........
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 157 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK- 157 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchh-
Confidence 99999999998853 56899999999999999999999999999999999999999999999999998765432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|++||+.... ....+.|+|+++++++|+..|.
T Consensus 158 ---------~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~tg~ 198 (277)
T cd06642 158 ---------RNTFVGTPFWMAPEVIKQS-----AYDFKADIWSLGITAIELAKGE 198 (277)
T ss_pred ---------hhcccCcccccCHHHhCcC-----CCchhhhHHHHHHHHHHHHhCC
Confidence 1112345668888876543 3456799999999999999993
No 325
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=2.5e-30 Score=224.95 Aligned_cols=186 Identities=19% Similarity=0.179 Sum_probs=149.5
Q ss_pred eecccCCeEEEEEEEcCC------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 107 HLGTGNLGRVFLCHLRDC------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
.||+|+||.||+|..... ....+++|.+... .....+.+.+|+.+++.+.||||+++++++..+...++|||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 599999999999987541 1234888887543 23445678889999999999999999999999899999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--------EEEeeecccccC
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH--------IMLSDFDLCFQS 252 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~--------~kl~DFG~a~~~ 252 (317)
|+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. ++|+|||++...
T Consensus 80 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 80 YVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred cCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 99999999998654 246899999999999999999999999999999999999987664 699999998654
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..... ..+...|++||+..... .....+|+|+++++++|+..|
T Consensus 159 ~~~~~--------------~~~~~~y~aPE~~~~~~----~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 159 LPKEI--------------LLERIPWVPPECIENPQ----NLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred CCchh--------------ccccCCccCchhccCCC----CCCchhhHHHHHHHHHHHHcC
Confidence 32211 12334588888764321 124678999999999999998
No 326
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=7.2e-30 Score=230.82 Aligned_cols=199 Identities=18% Similarity=0.270 Sum_probs=162.0
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----C
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----H 173 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 173 (317)
.++|++.+.||+|+||.||+|.+.. +++.||||.+............+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSE-TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecC-CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3589999999999999999998876 889999999876433344456677899999999999999999987643 3
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
..|+|+||+ +++|.+++.. ...+++..++.++.||+.||.|||+++++|+||||+||+++.++.+||+|||+++...
T Consensus 83 ~~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 83 DVYIVYELM-DTDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred cEEEEEeCC-CCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 589999999 5789888854 3679999999999999999999999999999999999999999999999999997664
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....... ...++..|++||...... ......|+|+++++++|+..|.|
T Consensus 160 ~~~~~~~----------~~~~~~~y~aPE~~~~~~----~~~~~~DiwslG~il~~l~~g~~ 207 (337)
T cd07858 160 EKGDFMT----------EYVVTRWYRAPELLLNCS----EYTTAIDVWSVGCIFAELLGRKP 207 (337)
T ss_pred CCccccc----------ccccccCccChHHHhcCC----CCCCcccHHHHHHHHHHHHcCCC
Confidence 3321111 113455688888764321 13467899999999999999854
No 327
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=7e-30 Score=227.00 Aligned_cols=204 Identities=23% Similarity=0.240 Sum_probs=162.0
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC--
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-- 173 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 173 (317)
....++|++.+.||+|+||.||+|.... +++.||+|+++...........+.+|+++++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKD-TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECC-CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 3456789999999999999999999876 7889999999765333333456778999999999999999999886544
Q ss_pred --------EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEee
Q 042913 174 --------YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSD 245 (317)
Q Consensus 174 --------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~D 245 (317)
.+++|+||+++ +|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence 79999999964 777766543 35689999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
||++......... ..........|++||...... ......|+|+++++++|+..|.|
T Consensus 160 fg~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~----~~~~~~Di~slG~~~~el~~g~~ 216 (302)
T cd07864 160 FGLARLYNSEESR---------PYTNKVITLWYRPPELLLGEE----RYGPAIDVWSCGCILGELFTKKP 216 (302)
T ss_pred ccccccccCCccc---------ccccceeccCccChHHhcCCC----CCCchhHHHHHHHHHHHHHhCCC
Confidence 9999765433210 001112345688888654221 12457899999999999998854
No 328
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=2e-29 Score=224.96 Aligned_cols=197 Identities=21% Similarity=0.253 Sum_probs=160.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
+.|++.+.||+|+||.||+|.... +++.||+|.+.... ........+.+|+++++.++||||+++++++...+..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVR-TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcC-CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 569999999999999999998876 78999999986432 2335556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+. ++|.+++... ...+++..+..++.||+.||.|||+.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 94 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~- 170 (307)
T cd06607 94 MEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS- 170 (307)
T ss_pred HHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC-
Confidence 99995 6777766433 35689999999999999999999999999999999999999999999999999865433221
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..+...|++||..... .........|+|++|.+++|+..|.|
T Consensus 171 -------------~~~~~~y~aPE~~~~~--~~~~~~~~sDv~s~G~il~el~tg~~ 212 (307)
T cd06607 171 -------------FVGTPYWMAPEVILAM--DEGQYDGKVDVWSLGITCIELAERKP 212 (307)
T ss_pred -------------ccCCccccCceeeecc--CCCCCCcccchHHHHHHHHHHHcCCC
Confidence 1344568888865321 11223467899999999999999943
No 329
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=1.1e-29 Score=225.33 Aligned_cols=195 Identities=21% Similarity=0.281 Sum_probs=162.5
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.++|++.+.||+|+||.||++.... ++..|++|.+... .....+.+.+|+.+++.++||||+++++.+...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVA-TGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcC-CCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 4789999999999999999998766 6789999998644 223346788899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
+||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred EecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 999999999999854 35789999999999999999999999999999999999999999999999998755432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++..|++||+.... ......|+|++++.++|+..|.
T Consensus 172 ----------~~~~~~~~~y~~PE~~~~~-----~~~~~~Dv~slG~ll~~ll~g~ 212 (293)
T cd06647 172 ----------RSTMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEMVEGE 212 (293)
T ss_pred ----------cccccCChhhcCchhhccC-----CCCchhhHHHHHHHHHHHHhCC
Confidence 1112344567888776432 2356799999999999999983
No 330
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=2.5e-30 Score=229.77 Aligned_cols=194 Identities=22% Similarity=0.312 Sum_probs=159.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..|.....||+|+||.||++.+.. ++..||+|++.... ....+.+.+|+.+++.++||||+++++.+..++..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKH-SGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcC-CCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 344556679999999999998876 78899999986542 233456888999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.. ..+++..++.++.||+.||.|||+.+++|+||||+||+++.++.++|+|||++.........
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~- 173 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK- 173 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc-
Confidence 99999999988744 45899999999999999999999999999999999999999999999999998755432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....+...|++||+... .......|+|+++++++|+..|-
T Consensus 174 ---------~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~ 214 (297)
T cd06659 174 ---------RKSLVGTPYWMAPEVISR-----TPYGTEVDIWSLGIMVIEMVDGE 214 (297)
T ss_pred ---------ccceecCccccCHHHHcc-----CCCCchhhHHHHHHHHHHHHhCC
Confidence 111234556788876643 23457899999999999999993
No 331
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=5.1e-29 Score=243.34 Aligned_cols=153 Identities=33% Similarity=0.586 Sum_probs=138.3
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
.++|++++.||+|+||.||+|.+.. +++.||||++.... ........+..|+.+++.++|+||+++++++.....+|+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKN-NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 4789999999999999999999886 78999999997543 234555778899999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
||||+.+++|.+++.. .+.+++..++.|+.||+.||.|||.++|+||||||+||||+.++.+||+|||+++....
T Consensus 82 VmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 82 VMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence 9999999999999965 35689999999999999999999999999999999999999999999999999987543
No 332
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=1.6e-29 Score=228.03 Aligned_cols=201 Identities=19% Similarity=0.257 Sum_probs=158.1
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe----cC
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV----SH 173 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~ 173 (317)
+|++.+.||+|+||.||++.... . +..||+|.+............+.+|+++++.+ +|+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE-TSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC-CCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 58899999999999999999876 5 78999999875433334456778899999999 49999999987542 24
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+|++++|+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|+.+.
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 578999999 5789988854 4678999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....... .......+...|++||+...+ .....++|+|+++++++|+..|-|
T Consensus 157 ~~~~~~~------~~~~~~~g~~~y~aPE~~~~~----~~~~~~~Di~slGv~l~~l~~g~~ 208 (332)
T cd07857 157 ENPGENA------GFMTEYVATRWYRAPEIMLSF----QSYTKAIDVWSVGCILAELLGRKP 208 (332)
T ss_pred ccccccc------ccccCcccCccccCcHHHhCC----CCCCcHHHHHHHHHHHHHHHhCCc
Confidence 4322100 011112345567777765321 234578999999999999998854
No 333
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=6.9e-30 Score=224.20 Aligned_cols=206 Identities=31% Similarity=0.471 Sum_probs=166.0
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 177 (317)
++|.+.+.||+|+||.||+|.... ++..|++|++..... .......+.+|.++++.++ |+||+++++++...+..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKE-TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcC-CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 479999999999999999999877 789999999976433 2344567889999999998 9999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
||||+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 80 VLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999999999654 5799999999999999999999999999999999999999999999999999976654332
Q ss_pred eeeccc----------ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNV----------GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~----------~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...... ..........+...|++||.... .......|+|+++++++|+..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-----~~~~~~~Di~slG~~l~~l~~g 218 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-----KPAGKSSDLWALGCIIYQMLTG 218 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCC-----CCCChhhhHHHHHHHHHHHHhC
Confidence 110000 00011112233455666665433 3356789999999999999988
No 334
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=7.5e-30 Score=230.72 Aligned_cols=191 Identities=20% Similarity=0.278 Sum_probs=156.5
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-H-----HHHHHHHHHHHHHhcC---CCCcceEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-K-----KLSHVQMEAEILSMLD---HPFLPTLYAHL 169 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~-----~~~~~~~E~~~l~~l~---h~~iv~~~~~~ 169 (317)
..+|..++.+|+|+||+|++|.++. ....|+||.+.+...-. . .+-.+-.||.||..|+ |+||++++++|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~-n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKE-NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecc-cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 4579999999999999999999988 57899999997653211 1 1123456999999998 99999999999
Q ss_pred EecCEEEEEEccc-CCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecc
Q 042913 170 EVSHYICFLIDYC-PNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDL 248 (317)
Q Consensus 170 ~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~ 248 (317)
++++++||+||-. ++.+|+++|.. ...+.+.++..|++||+.|+++||++||||||||-+|++++.+|.+||+|||.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 9999999999986 45689999965 46799999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccc
Q 042913 249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSV 308 (317)
Q Consensus 249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (317)
|......+.. .+ .|+-+|.+||...++--.++++ |+|.++..++
T Consensus 717 aa~~ksgpfd--~f----------~gtv~~aapevl~g~~y~gk~q----diwalgilly 760 (772)
T KOG1152|consen 717 AAYTKSGPFD--VF----------VGTVDYAAPEVLGGEKYLGKPQ----DIWALGILLY 760 (772)
T ss_pred hhhhcCCCcc--ee----------eeeccccchhhhCCCccCCCcc----hhhhhhheee
Confidence 8655544422 22 4567899999887776665554 5676665544
No 335
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.1e-29 Score=226.49 Aligned_cols=211 Identities=21% Similarity=0.250 Sum_probs=161.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
..++|++.+.||+|+||.||+|.+.. +++.+++|++............+.+|+++++.++|+||+++++++...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIK-TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECC-CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 36899999999999999999999877 788999999865533333334567899999999999999999887433
Q ss_pred ---CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 173 ---HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 173 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
..+++|+||+ .++|...+... ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++
T Consensus 85 ~~~~~~~lv~~~~-~~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 85 RKRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred ccCceEEEEEecC-CcCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 3579999999 45677766433 457999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeecc-cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 250 FQSDVVPTLVETN-VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 250 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
+............ ...........+...|++||..... .......|+|+++++++|+..|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE----RRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCC----CccCchhHhHHHHHHHHHHHhCCC
Confidence 7665433211110 0011111122334557777765432 223457899999999999999954
No 336
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.9e-29 Score=221.75 Aligned_cols=197 Identities=27% Similarity=0.377 Sum_probs=161.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHYICF 177 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 177 (317)
++|++.+.||.|++|.||+|.+.. +++.+|+|.+.... .......+.+|+++++.++|+||+++++++.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKN-TGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECC-CCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 468999999999999999999877 78999999987543 23455778999999999999999999998854 447899
Q ss_pred EEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 178 LIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
||||+++++|.+++.. .....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999887643 22456889999999999999999999999999999999999999999999999998654321
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ....+...|++||..... ......|+|+++++++|+..| .|
T Consensus 159 ~~------------~~~~~~~~y~~pE~~~~~-----~~~~~~Dv~slG~il~~l~~g~~p 202 (287)
T cd06621 159 LA------------GTFTGTSFYMAPERIQGK-----PYSITSDVWSLGLTLLEVAQNRFP 202 (287)
T ss_pred cc------------ccccCCccccCHHHhcCC-----CCCchhhHHHHHHHHHHHHhCCCC
Confidence 11 011334567888866432 234678999999999999998 44
No 337
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=2.6e-29 Score=227.94 Aligned_cols=194 Identities=20% Similarity=0.270 Sum_probs=158.7
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------ 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 172 (317)
.++|.+.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++|+||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcC-CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4789999999999999999998776 789999999976543444456788899999999999999999987543
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
...|++++++ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 3478899988 8899888753 45899999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... ...++..|++||.... ......+.|+|++|++++|+..|-
T Consensus 171 ~~~~~-------------~~~~~~~y~aPE~~~~----~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 171 DDEMT-------------GYVATRWYRAPEIMLN----WMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred ccccc-------------ccccCCCccCHHHHhC----ccCCCchhhHHHHHHHHHHHHhCC
Confidence 32110 1133455788886542 123456789999999999999993
No 338
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=9.9e-31 Score=253.36 Aligned_cols=209 Identities=21% Similarity=0.287 Sum_probs=163.0
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS----- 172 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 172 (317)
-..+|+.++.||+||||.||+++++- +|+.||||.+.... ......++.+|+.+|.+|+|||||++|..|.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKl-DGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKL-DGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecc-cchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 34678888999999999999999887 89999999998776 667778999999999999999999997433100
Q ss_pred --------------------------------------------------------------------------------
Q 042913 173 -------------------------------------------------------------------------------- 172 (317)
Q Consensus 173 -------------------------------------------------------------------------------- 172 (317)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CEEEEEEcccCCCChhcccccCCCCCC-CHHHHHHHHHHHHHHHHH
Q 042913 173 ----------------------------------HYICFLIDYCPNGDLHSLLPKQPNNRF-SLQAVRFFAAEVLVGLEY 217 (317)
Q Consensus 173 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~~~~~i~~qi~~al~~ 217 (317)
..+|+-||||+...|.+++.++ ... .....+++++||++||.|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N--~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN--HFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc--ccchhhHHHHHHHHHHHHHHHH
Confidence 1368899999888888888654 222 467899999999999999
Q ss_pred HHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC-------CCCCeeeccccccc-ccccccccCCCCCccccccccc
Q 042913 218 LHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD-------VVPTLVETNVGSAT-RRRRRKSCNGFGSAKRRQENVM 289 (317)
Q Consensus 218 LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~sp~~~~~~~~ 289 (317)
+|++|||||||||.||++++++.|||+|||+|.... ..........|... -.....|+.-|.|||.....-.
T Consensus 713 IH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred HHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 999999999999999999999999999999997632 11111111122222 3345678888999987654332
Q ss_pred ceeccchhhhccCCcccccccCC
Q 042913 290 EFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
....-+.|+.|+|.++.|+..
T Consensus 793 --~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 793 --NKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred --ccccchhhhHHHHHHHHHHhc
Confidence 233467889999999998753
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=2.8e-29 Score=221.08 Aligned_cols=197 Identities=22% Similarity=0.282 Sum_probs=161.9
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--CEEEEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--HYICFLI 179 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 179 (317)
|++.+.||+|+||.||+|.+.. +++.+|+|.+............+.+|+++++.++|+|++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKK-TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECC-CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 6789999999999999998876 789999999987643344456678899999999999999999999887 8999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||++ ++|.+++... ...+++..++.++.||+.||+|||+.|++|+||||+||++++++.++|+|||++.........
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~- 156 (287)
T cd07840 80 EYMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA- 156 (287)
T ss_pred cccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-
Confidence 9995 5888888554 257899999999999999999999999999999999999999999999999999766543321
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
......+...|++||...... ......|+|+++++++|+..|-
T Consensus 157 --------~~~~~~~~~~y~~PE~~~~~~----~~~~~~Dv~slG~~l~el~t~~ 199 (287)
T cd07840 157 --------DYTNRVITLWYRPPELLLGAT----RYGPEVDMWSVGCILAELFLGK 199 (287)
T ss_pred --------cccccccccccCCceeeEccc----cCChHHHHHHHHHHHHHHHhCC
Confidence 011123445688888654321 2346789999999999999883
No 340
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=3.6e-29 Score=220.54 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=157.7
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc---CCCCcceEEEEEEecCE----
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML---DHPFLPTLYAHLEVSHY---- 174 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~---- 174 (317)
|++.+.||+|+||.||+|.+.. ++..||+|.+............+.+|+.+++.+ +|+||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLN-TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECC-CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6789999999999999999876 789999999975443333345566788777666 59999999999987776
Q ss_pred -EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 175 -ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 175 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
++++|||+. ++|.+++.......+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 689888866544568999999999999999999999999999999999999999999999999997764
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..... ....+...|.+||+... .....+.|+|++|++++|+..|-|
T Consensus 159 ~~~~~-----------~~~~~~~~~~~PE~~~~-----~~~~~~~Di~s~G~~l~~l~~~~~ 204 (287)
T cd07838 159 FEMAL-----------TSVVVTLWYRAPEVLLQ-----SSYATPVDMWSVGCIFAELFRRRP 204 (287)
T ss_pred CCccc-----------ccccccccccChHHhcc-----CCCCCcchhhhHHHHHHHHHhCCC
Confidence 33211 01123445677776543 334567899999999999998854
No 341
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=3.9e-29 Score=215.47 Aligned_cols=193 Identities=25% Similarity=0.410 Sum_probs=165.9
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|.+.+.||+|++|.||++.+.. +++.+++|++..... .....+.+|+++++.++|+||+++++.+......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKR-TGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECC-CCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 58889999999999999999886 788999999976532 456788999999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.... ..+++..++.++.|++.+|.+||..|++|+||+|+||+++.++.++|+|||++........
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999999986542 5789999999999999999999999999999999999999999999999999876544321
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.....+...|.+||+..... ...+.|+|+++++++|+..|
T Consensus 154 --------~~~~~~~~~~~~PE~~~~~~-----~~~~~Dv~slG~il~~l~~g 193 (253)
T cd05122 154 --------RNTMVGTPYWMAPEVINGKP-----YDYKADIWSLGITAIELAEG 193 (253)
T ss_pred --------ccceecCCcccCHHHHcCCC-----CCccccHHHHHHHHHHHHhC
Confidence 11224556788888775443 45779999999999999988
No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=8.8e-30 Score=229.42 Aligned_cols=200 Identities=20% Similarity=0.253 Sum_probs=162.4
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC-----EE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-----YI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 175 (317)
+|++.+.||+|+||.||+|.... +++.|++|.+..........+.+.+|+.+++.++|+||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKR-TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCC-CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 58999999999999999999876 6899999999765433455678899999999999999999999987765 78
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|++|||+. ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 6898888553 47999999999999999999999999999999999999999999999999999765443
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.... .......+...|.+||...... ....+.|+|+++++++|+..|-|
T Consensus 157 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~----~~~~~sDi~slG~il~~l~~g~~ 205 (330)
T cd07834 157 EDEK-------GFLTEYVVTRWYRAPELLLSSS----RYTKAIDIWSVGCIFAELLTRKP 205 (330)
T ss_pred cccc-------ccccccccccCcCCceeeeccc----CCCcchhHHHHHHHHHHHHcCCC
Confidence 2110 0001112334466776654321 45678999999999999999954
No 343
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=6.9e-30 Score=225.61 Aligned_cols=200 Identities=21% Similarity=0.264 Sum_probs=158.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 178 (317)
++|...+.||+|+||.||++.+.. +++.||+|.+...... .....+.+|+.++.++. |+||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKP-SGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECC-CCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 466777889999999999999887 7899999998754322 44567888999999996 99999999999999999999
Q ss_pred EcccCCCChhccc---ccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 179 IDYCPNGDLHSLL---PKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 179 ~e~~~~gsL~~~l---~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
|||+ +++|.++. .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++....
T Consensus 82 ~e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 82 MELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred Eecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9998 45655433 223346789999999999999999999974 999999999999999999999999999976532
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
... .....++..|++||....+. ......++|+|+++++++|+..| .|
T Consensus 161 ~~~-----------~~~~~~~~~y~aPE~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p 209 (288)
T cd06616 161 SIA-----------KTRDAGCRPYMAPERIDPSA--RDGYDVRSDVWSLGITLYEVATGKFP 209 (288)
T ss_pred CCc-----------cccccCccCccCHHHhcccc--ccCCcchhhhhHHHHHHHHHHhCCCC
Confidence 211 01113455688888765432 12334678999999999999988 55
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.8e-29 Score=225.84 Aligned_cols=195 Identities=21% Similarity=0.221 Sum_probs=154.8
Q ss_pred CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhccc
Q 042913 112 NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLL 191 (317)
Q Consensus 112 ~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 191 (317)
++|.||.++... +++.||+|++............+.+|+++++.++|+||+++++++...+..+++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 445555555555 6899999999876555667788999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccccccccc
Q 042913 192 PKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRR 271 (317)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
.......+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||.+.............. .....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~---~~~~~ 167 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH---DFPKS 167 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc---ccccc
Confidence 765556789999999999999999999999999999999999999999999999999876543221100000 00112
Q ss_pred ccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 272 RKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 272 ~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..+...|++||+...+... .....|+|++|++++|+..|
T Consensus 168 ~~~~~~y~aPE~~~~~~~~---~~~~~Diws~G~il~el~~g 206 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQG---YNEKSDIYSVGITACELANG 206 (314)
T ss_pred ccccccccCHHHhcCCCCC---CCcchhHHHHHHHHHHHHhC
Confidence 2344568888877543322 34568999999999999998
No 345
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.1e-30 Score=217.26 Aligned_cols=203 Identities=29% Similarity=0.488 Sum_probs=180.0
Q ss_pred CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913 93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSML-DHPFLPTLYAHLE 170 (317)
Q Consensus 93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 170 (317)
....+.+++|.++++||+|+|.+|.++++.+ +.+.+|+|++++..... +.++-.+.|..+.... +||.+|-+..+|.
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~-t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq 321 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKK-TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ 321 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcc-cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc
Confidence 4556778999999999999999999999888 89999999999887665 4556677788887665 6999999999999
Q ss_pred ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~ 250 (317)
.+..+++|.||++||+|--.+.++ .+++++.++.+...|+.||.|||+.|||+||||.+|+|+|..|++||.|+|+|+
T Consensus 322 tesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 322 TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred ccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhh
Confidence 999999999999999998888554 779999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..-.......+++ |+|.|+.+++....+.....|-|.++..+.|+..|
T Consensus 400 e~l~~gd~tstfc---------------gtpnyiapeilrgeeygfsvdwwalgvlmfemmag 447 (593)
T KOG0695|consen 400 EGLGPGDTTSTFC---------------GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 447 (593)
T ss_pred cCCCCCccccccc---------------CCCcccchhhhcccccCceehHHHHHHHHHHHHcC
Confidence 7665555555555 55788888888888999999999999999999999
No 346
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=4.4e-29 Score=223.78 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=160.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..|...+.||+|+||.||++.+.. ++..||+|.+..... ..+....+.+|+++++.++|+|++++++++..+...++|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVR-TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcC-CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 347888899999999999998876 789999999875422 334556788999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+. |+|.+++... ...+++..+..++.||+.||.|||+.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 104 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (317)
T cd06635 104 MEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS- 180 (317)
T ss_pred EeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCccc-
Confidence 99995 5777776543 35689999999999999999999999999999999999999999999999999865433211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..++..|++||+..... ........|+|+++++++|+..|-
T Consensus 181 -------------~~~~~~y~aPE~~~~~~--~~~~~~~~Dv~slGvil~el~~g~ 221 (317)
T cd06635 181 -------------FVGTPYWMAPEVILAMD--EGQYDGKVDVWSLGITCIELAERK 221 (317)
T ss_pred -------------ccCCccccChhhhhcCC--CCCCCccccHHHHHHHHHHHHhCC
Confidence 13455688898864211 112356789999999999999984
No 347
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=3.8e-29 Score=225.33 Aligned_cols=196 Identities=24% Similarity=0.297 Sum_probs=160.1
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-cCEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-SHYIC 176 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 176 (317)
..++|++++.||.|+||.||+|.... +++.||+|.+.+..........+.+|+++++.++||||+++++++.. ....|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQL-TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECC-CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 45789999999999999999998877 78999999986544344455678889999999999999999998865 56789
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
+++||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+|+|+||||.||+++.++.++|+|||++.......
T Consensus 87 lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~ 162 (328)
T cd07856 87 FVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM 162 (328)
T ss_pred EEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc
Confidence 999999 7789888753 457888899999999999999999999999999999999999999999999987543211
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ...+...|++||+... ......+.|+|+++++++|+..|.|
T Consensus 163 ~-------------~~~~~~~y~aPE~~~~----~~~~~~~~Dv~slG~il~el~tg~~ 204 (328)
T cd07856 163 T-------------GYVSTRYYRAPEIMLT----WQKYDVEVDIWSAGCIFAEMLEGKP 204 (328)
T ss_pred C-------------CCcccccccCceeeec----cCCcCcHHHHHHHHHHHHHHHhCCC
Confidence 0 0123445777776532 1234578999999999999999943
No 348
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.96 E-value=2.8e-29 Score=217.17 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=155.4
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
++||+|+||.||+|.+.. ++.|++|.+...... .....+.+|+++++.++|+||+++++++......++||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~--~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG--NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC--CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 359999999999998765 899999998765433 45567899999999999999999999999999999999999999
Q ss_pred ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccc
Q 042913 186 DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGS 265 (317)
Q Consensus 186 sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 265 (317)
+|.+++... ...+++..+..++.|++.+|.|||+++++||||||+|||++.++.++|+|||+++...........
T Consensus 78 ~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~---- 152 (251)
T cd05041 78 SLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD---- 152 (251)
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc----
Confidence 999998654 346789999999999999999999999999999999999999999999999999765432211110
Q ss_pred ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 266 ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
........|.+||+.... ....+.|+|+++++++|+..
T Consensus 153 ----~~~~~~~~y~~PE~~~~~-----~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 153 ----GLKQIPIKWTAPEALNYG-----RYTSESDVWSYGILLWETFS 190 (251)
T ss_pred ----ccCcceeccCChHhhccC-----CCCcchhHHHHHHHHHHHHh
Confidence 011223457778766432 24578899999999999986
No 349
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-30 Score=230.07 Aligned_cols=197 Identities=21% Similarity=0.265 Sum_probs=164.0
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEecC
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~ 173 (317)
-+.....++.+.||+|.||.||+|.+.+ +.||||++. .+..+.+++|.+|... ++|+||++|++.-+...
T Consensus 206 l~~l~pl~l~eli~~Grfg~V~KaqL~~---~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t 277 (534)
T KOG3653|consen 206 LLELDPLQLLELIGRGRFGCVWKAQLDN---RLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT 277 (534)
T ss_pred cccCCchhhHHHhhcCccceeehhhccC---ceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCC
Confidence 3456788899999999999999998875 899999994 4556778888888775 57999999998866544
Q ss_pred ----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeeccCCCCcEEEccCCc
Q 042913 174 ----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL---------GIIYRDLKPENILLREDGH 240 (317)
Q Consensus 174 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---------~ivHrDikp~Nill~~~~~ 240 (317)
.++||++|.+.|+|.+||+. ..++|....+|+..+++||+|||+- .|+|||||..||||.+|+.
T Consensus 278 ~~~~eywLVt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT 354 (534)
T KOG3653|consen 278 ADRMEYWLVTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT 354 (534)
T ss_pred ccccceeEEeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc
Confidence 79999999999999999976 5689999999999999999999973 4999999999999999999
Q ss_pred EEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccce-eccchhhhccCCcccccccC
Q 042913 241 IMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEF-VAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 241 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~ 311 (317)
+.|+|||+|.++.+......+. ...|+..||+||...+-++-. -..-++.|+.+.+..++|+.
T Consensus 355 ccIaDFGLAl~~~p~~~~~d~~--------~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~ 418 (534)
T KOG3653|consen 355 CCIADFGLALRLEPGKPQGDTH--------GQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIA 418 (534)
T ss_pred EEeeccceeEEecCCCCCcchh--------hhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888655432221 147888999999876554443 34467888999999988864
No 350
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=9.4e-29 Score=222.31 Aligned_cols=191 Identities=15% Similarity=0.036 Sum_probs=141.0
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh---cHHHHHHHHHHHHHHHhcCCCCcce-EEEEEEe
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL---SAKKLSHVQMEAEILSMLDHPFLPT-LYAHLEV 171 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~ 171 (317)
....++|.+.+.||+|+||+||+|.+...+++.+|||++..... .......+.+|+++|+.++|+|++. +++.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 44567899999999999999999987754677889998753311 2334567899999999999999985 5432
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC-CCCcEEEccCCcEEEeeecccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDL-KPENILLREDGHIMLSDFDLCF 250 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDi-kp~Nill~~~~~~kl~DFG~a~ 250 (317)
+..|+||||++|++|.... . .. ...++.|++.+|.|||+.||+|||| ||+|||++.++.+||+|||+|+
T Consensus 91 -~~~~LVmE~~~G~~L~~~~-~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLAR-P-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred -CCcEEEEEccCCCCHHHhC-c-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 4579999999999997321 1 11 1467889999999999999999999 9999999999999999999998
Q ss_pred cCCCCCCeeecccccccccccccccCCCCCcccccccccceecc-chhhhcc
Q 042913 251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAE-PRREQRE 301 (317)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~-~~~~~~~ 301 (317)
.+........ ......-....++..|++||+..++-....+. ....|.|
T Consensus 161 ~~~~~~~~~~--~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 161 VFRRRGALYR--IAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ecccCcchhh--hhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 8755332111 00001112445677789999988776664433 3555555
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=1.8e-29 Score=228.19 Aligned_cols=203 Identities=24% Similarity=0.284 Sum_probs=160.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe--cCE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV--SHY 174 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~--~~~ 174 (317)
..++|.+.+.||+|+||.||+|.+.. +++.+|+|.+............+.+|+.+++.+ +|+||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRR-TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcC-CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 35789999999999999999998876 688999998865433344456677899999999 99999999998864 346
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|+||||+. ++|..++.. ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||+++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred EEEEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 899999995 699888854 2678889999999999999999999999999999999999999999999999976543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... +. .......++..|++||..... .....+.|+|++|++++|+..|.
T Consensus 160 ~~~~~----~~-~~~~~~~~~~~y~aPE~~~~~----~~~~~~sDi~slG~~l~el~tg~ 210 (337)
T cd07852 160 LEENP----EN-PVLTDYVATRWYRAPEILLGS----TRYTKGVDMWSVGCILGEMLLGK 210 (337)
T ss_pred ccccc----cC-cchhcccccccccCceeeecc----ccccccchHHHHHHHHHHHHhCC
Confidence 32110 00 011112345567888765321 23356789999999999999994
No 352
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=5.1e-29 Score=219.12 Aligned_cols=194 Identities=21% Similarity=0.280 Sum_probs=155.2
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEec--CEEEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVS--HYICFL 178 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~--~~~~lv 178 (317)
|++.+.||+|+||.||+|.... ++..||+|.+......... ....+|+.+++++. |+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~-~~~~~aik~~~~~~~~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRK-TGKYYAIKCMKKHFKSLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcC-CCcEEEEEEehhccCCchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6789999999999999998876 7899999998764322222 23456888888885 99999999999887 889999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||++ ++|.+.+... ...+++..++.++.||+.||.|||+.|++||||||+||+++. +.+||+|||+++........
T Consensus 79 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 79 FELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred EecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 99995 6888877543 356899999999999999999999999999999999999999 99999999999765432211
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
. ...++..|++||+...+ .......|+|++|++++|+..|.|
T Consensus 156 ~-----------~~~~~~~y~aPE~~~~~----~~~~~~~Di~slGv~l~el~~~~~ 197 (282)
T cd07831 156 T-----------EYISTRWYRAPECLLTD----GYYGPKMDIWAVGCVFFEILSLFP 197 (282)
T ss_pred C-----------CCCCCcccCChhHhhcC----CCCCcchhHHHHHHHHHHHHcCCc
Confidence 0 01234568888864321 223567899999999999998843
No 353
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=1.9e-29 Score=219.44 Aligned_cols=197 Identities=29% Similarity=0.466 Sum_probs=157.6
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||.|+||.||++.+.. +++.+++|++..... .......+.+|+++++.++|+||+++++.+......|+++||+++++
T Consensus 1 lg~g~~~~vy~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKS-TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECC-CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 6899999999999876 789999999976533 23556788999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++........... ....
T Consensus 80 L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~- 155 (265)
T cd05579 80 LASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL-NDDE- 155 (265)
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-cccc-
Confidence 99999664 4789999999999999999999999999999999999999999999999999876443321100 0000
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.......+...|.+||..... ......|+|+++++++|+..|.
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~-----~~~~~~Dv~slG~~~~~l~~g~ 198 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQ-----GHSKTVDWWSLGCILYEFLVGI 198 (265)
T ss_pred ccccCcccCccccCHHHhcCC-----CCCcchhhHHHHHHHHHHHhCC
Confidence 011111233456666665432 3567899999999999999983
No 354
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=5e-29 Score=216.82 Aligned_cols=187 Identities=26% Similarity=0.415 Sum_probs=151.9
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHH-HhcCCCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEIL-SMLDHPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.||+|+||.||+|.... +++.||+|++.+.... ......+..|..++ ...+|+|++++++.+..++.+|+|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS-TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecC-CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 469999999999998876 7889999998754322 22333445555544 44589999999999999999999999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV 263 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 263 (317)
+++|.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||+++......
T Consensus 81 ~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~------- 151 (260)
T cd05611 81 GGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK------- 151 (260)
T ss_pred CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccc-------
Confidence 99999999653 568999999999999999999999999999999999999999999999999987543211
Q ss_pred ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 264 GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...++..|++||...... .....|+|+++.+++|+..|.
T Consensus 152 -------~~~~~~~y~~pe~~~~~~-----~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 152 -------KFVGTPDYLAPETILGVG-----DDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred -------cCCCCcCccChhhhcCCC-----CcchhhhHHHHHHHHHHHHCC
Confidence 113455688888765432 356789999999999999983
No 355
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=3.5e-29 Score=216.87 Aligned_cols=196 Identities=21% Similarity=0.295 Sum_probs=164.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+|++.+.||+|+||.||++.... +++.+++|.+............+.+|+++++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLS-DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECC-CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 58899999999999999998776 78899999998765555566778889999999999999999999999999999999
Q ss_pred ccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 181 YCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 181 ~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|+++++|.+++... ....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 158 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA- 158 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc-
Confidence 99999999988652 235689999999999999999999999999999999999999999999999999976544310
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
. ...+...|.+||+... .......|+|+++++++|+..|.
T Consensus 159 -~----------~~~~~~~~~~Pe~~~~-----~~~~~~~D~~slG~~~~~l~~g~ 198 (256)
T cd08530 159 -K----------TQIGTPHYMAPEVWKG-----RPYSYKSDIWSLGCLLYEMATFA 198 (256)
T ss_pred -c----------cccCCccccCHHHHCC-----CCCCchhhHHHHHHHHHHHHhCC
Confidence 0 1123446777777643 23346789999999999999983
No 356
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=6.4e-30 Score=241.24 Aligned_cols=202 Identities=21% Similarity=0.292 Sum_probs=164.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV 171 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 171 (317)
.+...+.+..+.||+|.||+||+|+... .....||||.++... ..+...+|++|++++..++|||||+|+|+|..
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 4666788999999999999999997653 234689999997653 44577899999999999999999999999999
Q ss_pred cCEEEEEEcccCCCChhcccccC--------CCCC----CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQ--------PNNR----FSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~--------~~~~----~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
++.+|||||||..|+|.++|... .+.. ++..+.+.|+.||+.||.||-++.+|||||-..|+||.++.
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 99999999999999999998643 1223 78899999999999999999999999999999999999999
Q ss_pred cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC
Q 042913 240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (317)
.|||+|||++|.. +. .++++..-..+..-|+++++-..+..-.-..|+|+-|.+++|..
T Consensus 641 ~VKIsDfGLsRdi-----------Ys--sDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 641 VVKISDFGLSRDI-----------YS--SDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIF 699 (774)
T ss_pred EEEecccccchhh-----------hh--hhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhh
Confidence 9999999999753 11 11222332334444444444445556668899999999999975
No 357
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-31 Score=229.20 Aligned_cols=204 Identities=25% Similarity=0.491 Sum_probs=176.4
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcC-CCCcceEEEEEEe
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLD-HPFLPTLYAHLEV 171 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 171 (317)
...+...+|..+.+||+|+||+|.++..+. +.+.+|||+++++..-+ +..+--..|.++|.... -|.++++..+|..
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkg-tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT 421 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKG-TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT 421 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccC-cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh
Confidence 346778899999999999999999997666 88999999998875443 44455667888888775 6788999999999
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
-+.+|+||||+.||+|--.+.. .++|.+..+..++..|+.||-+||++|||+||||.+|||++.+|++||+|||+|+.
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred hhheeeEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccc
Confidence 9999999999999999888844 57899999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.-.......+++ |+|.|+.+++..+.+.....|-|+-+..++|+..|.|
T Consensus 500 ni~~~~TTkTFC---------------GTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQp 548 (683)
T KOG0696|consen 500 NIFDGVTTKTFC---------------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 548 (683)
T ss_pred cccCCcceeeec---------------CCCcccccceEEecccccchhHHHHHHHHHHHHcCCC
Confidence 655444444444 5678888888888899999999999999999999966
No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=6e-29 Score=219.68 Aligned_cols=201 Identities=29% Similarity=0.450 Sum_probs=161.5
Q ss_pred CeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLS--AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 175 (317)
+|++.+.||+|+||.||++.... .++..||+|++.+.... ......+.+|+.++..+ +|+||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 48899999999999999997642 25688999998754322 23446788899999999 599999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++||||+.+++|.+++.. ...+++..++.++.|++.+|.|||+.+++|+||||.||+++.++.++|+|||+++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 999999999999999854 356899999999999999999999999999999999999999999999999998765433
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.... .....+...|++||....... ......|+|+++++++|+..| .|
T Consensus 159 ~~~~---------~~~~~~~~~y~aPE~~~~~~~---~~~~~~Dv~slG~il~el~tg~~p 207 (288)
T cd05583 159 EEER---------AYSFCGTIEYMAPEVIRGGSG---GHDKAVDWWSLGVLTFELLTGASP 207 (288)
T ss_pred cccc---------cccccCCccccCHHHhcCCCC---CCcchhhhHHHHHHHHHHHhCCCC
Confidence 2110 011124456788887644321 134678999999999999998 44
No 359
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=4e-29 Score=221.52 Aligned_cols=193 Identities=21% Similarity=0.297 Sum_probs=159.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
.|.....||+|+||.||++.... ++..||+|.+... .......+.+|+.+++.++|+||+++++.+...+..++|||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKS-SGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcC-CCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEe
Confidence 33444679999999999998876 7899999988543 33445678899999999999999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+++++|.+++.. ..+++..++.++.|++.+|+|||+.|++|+||||+||++++++.++|+|||++.........
T Consensus 98 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~-- 172 (292)
T cd06657 98 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-- 172 (292)
T ss_pred cCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccc--
Confidence 9999999998743 45899999999999999999999999999999999999999999999999998655332111
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.....++.+|++||+.... ......|+|+++++++|+..|-
T Consensus 173 --------~~~~~~~~~y~~pE~~~~~-----~~~~~~Dv~slGvil~el~tg~ 213 (292)
T cd06657 173 --------RKSLVGTPYWMAPELISRL-----PYGPEVDIWSLGIMVIEMVDGE 213 (292)
T ss_pred --------ccccccCccccCHHHhcCC-----CCCchhhHHHHHHHHHHHHhCC
Confidence 1112345678888877432 2346789999999999999983
No 360
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-29 Score=227.76 Aligned_cols=200 Identities=20% Similarity=0.245 Sum_probs=160.7
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 175 (317)
++....+.++++||+|.||.|.+|+... +..||+|.++.+. .......|.+|+++|.+|+||||++++++|..++.+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecC--ceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 4556788999999999999999998775 7899999998764 334457899999999999999999999999999999
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
++|+||+++|+|.+++.+.....+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++.+=..
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999999997764333455667789999999999999999999999999999999999999999999865332
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (317)
...-.. .+-..--.||++|-+-.+ .-.-..|.|.-+.+++|..
T Consensus 691 ~yy~vq--------gr~vlpiRwmawEsillg-----kFttaSDvWafgvTlwE~~ 733 (807)
T KOG1094|consen 691 DYYRVQ--------GRAVLPIRWMAWESILLG-----KFTTASDVWAFGVTLWEVF 733 (807)
T ss_pred Cceeee--------cceeeeeeehhHHHHHhc-----cccchhhhhhhHHHHHHHH
Confidence 211000 001112357888765322 2246778899888888753
No 361
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=1.3e-28 Score=217.47 Aligned_cols=194 Identities=23% Similarity=0.332 Sum_probs=160.4
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..|...+.||+|++|.||++.... +++.+++|.+... .....+.+.+|+.+++.++|+||+++++++...+..++++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKS-TGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECC-CCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence 345566789999999999998776 6889999988643 3344466889999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+++++|.+++.. ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++........
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-- 170 (285)
T cd06648 96 EFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-- 170 (285)
T ss_pred eccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--
Confidence 99999999999865 4689999999999999999999999999999999999999999999999999865432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
......+...|++||...... ...+.|+|+++++++|+..|-
T Consensus 171 --------~~~~~~~~~~y~aPE~~~~~~-----~~~~~Dv~slGv~l~ell~g~ 212 (285)
T cd06648 171 --------RRKSLVGTPYWMAPEVISRLP-----YGTEVDIWSLGIMVIEMVDGE 212 (285)
T ss_pred --------ccccccCCccccCHHHhcCCC-----CCCcccHHHHHHHHHHHHhCC
Confidence 111123456688888765432 346789999999999999983
No 362
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=223.32 Aligned_cols=197 Identities=21% Similarity=0.288 Sum_probs=162.1
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEec----
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEVS---- 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~---- 172 (317)
.++.++.+.||+|.||.||+|.++ |+.||||++... +.+.+.+|.+|.+. |+|+||+.|++.-..+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr---Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR---GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc---CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 478899999999999999999998 589999999643 22457778887765 6999999999875433
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeccCCCCcEEEccCCcEEEe
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL--------GIIYRDLKPENILLREDGHIMLS 244 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------~ivHrDikp~Nill~~~~~~kl~ 244 (317)
.++|||.+|.+.|+|+|+|.+ ..++.....+++..++.||+|||.. .|.|||||..||||.++|.+.|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 358999999999999999966 5688999999999999999999963 49999999999999999999999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCC
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|+|||...+.......- ..-++.|+-.||+||...+.... ..+.-.++|+|+.+.+++|.++
T Consensus 359 DLGLAv~h~~~t~~idi------~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDI------PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred eceeeEEecccCCcccC------CCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999777655332221 22245888899999998766554 3466788999999999999764
No 363
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=6.9e-29 Score=220.30 Aligned_cols=204 Identities=20% Similarity=0.299 Sum_probs=162.3
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHY 174 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 174 (317)
.+..++|++.+.||+|+||.||+|.+.. +++.||||.+..... ......+..|+.++..+. |+||+++++++.....
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKK-TGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECC-CCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 4567899999999999999999999886 689999999976432 233445666777666665 9999999999999999
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.|++|||+ ++.|.+++... ...+++..+..++.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||++..+.
T Consensus 89 ~~~v~e~~-~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 89 VFICMELM-STCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEEEeecc-CcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99999998 56777776543 3478999999999999999999997 599999999999999999999999999987653
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
..... ....++..|++||+...... ........|+|+++++++|+..| .|
T Consensus 167 ~~~~~-----------~~~~~~~~y~aPE~~~~~~~-~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 167 DSKAK-----------TRSAGCAAYMAPERIDPPDP-NPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred CCCcc-----------cCCCCCccccCHhhcCCCCC-ccccccchhHHHHHHHHHHHHhCCCC
Confidence 32211 11235567888988754321 12234678999999999999999 44
No 364
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=2.1e-29 Score=220.23 Aligned_cols=195 Identities=20% Similarity=0.241 Sum_probs=153.8
Q ss_pred eecccCCeEEEEEEEcC-----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 107 HLGTGNLGRVFLCHLRD-----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
.||+|+||.||+|.... ..+..+++|.+.... .......+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 58999999999998754 123679999886542 234456788899999999999999999999999999999999
Q ss_pred cCCCChhcccccC-----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-----cEEEeeeccccc
Q 042913 182 CPNGDLHSLLPKQ-----PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-----HIMLSDFDLCFQ 251 (317)
Q Consensus 182 ~~~gsL~~~l~~~-----~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-----~~kl~DFG~a~~ 251 (317)
+++++|.+++... ....+++..++.++.||+.||.|||+.+++|+||||+||+++.++ .++|+|||+++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999998643 224478899999999999999999999999999999999999877 899999999976
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP 315 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p 315 (317)
........ ..........|++||+.... ....+.|+|+++++++|+.. | .|
T Consensus 161 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 161 IYKSDYYR--------KEGEGLLPVRWMAPESLLDG-----KFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred cccccccc--------cCcccCCCccccCHHHHccC-----CcccchhHHHHHHHHHHHHHcCCCC
Confidence 53321110 00111223467888876543 23578999999999999875 6 44
No 365
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=1.8e-30 Score=219.37 Aligned_cols=207 Identities=18% Similarity=0.214 Sum_probs=157.9
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCC---ceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-cC
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTS---ANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-SH 173 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~ 173 (317)
.+..|++.+.||+|.||.||+|.-.+..+ +.+|||.++........-....+|+.+++.++|+||+.+..+|.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 35689999999999999999996554222 268999886542222223456789999999999999999988876 88
Q ss_pred EEEEEEcccCCCChhcccccC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC----CcEEEeee
Q 042913 174 YICFLIDYCPNGDLHSLLPKQ---PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED----GHIMLSDF 246 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~----~~~kl~DF 246 (317)
.+||++||. .-+|.++|+-. ..+.++...++.|+.||+.|+.|||++-|+||||||.||||..+ |+|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 55788877532 23568999999999999999999999999999999999999877 89999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
|+|+.+...-.-..+ ..+...+.-|.+||-.-+-.+. ....|+|+.+|+..|+.+--|+
T Consensus 181 GlaR~~~~plkpl~s-------~d~VVVTiWYRAPELLLGa~hY----T~AiDvWAiGCIfaElLtl~Pl 239 (438)
T KOG0666|consen 181 GLARLFNNPLKPLAS-------LDPVVVTIWYRAPELLLGARHY----TKAIDVWAIGCIFAELLTLEPL 239 (438)
T ss_pred cHHHHhhcccccccc-------CCceEEEEEecChHHhcccccc----cchhhhHHHHHHHHHHHccCcc
Confidence 999887654321111 1112233345666655433322 3678999999999999877664
No 366
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=3.3e-29 Score=227.07 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=160.2
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE----
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY---- 174 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 174 (317)
.++|++.+.||+|+||.||+|.+.. ++..||+|++............+.+|+.+++.++|+||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTK-TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECC-CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 5689999999999999999999887 78899999987654344455677889999999999999999887765544
Q ss_pred --EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 175 --ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 175 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
.++|+||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7899998854 46899999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... ...++..|.+||...... .....+|+|++|++++|+..|.
T Consensus 169 ~~~~~-------------~~~~~~~y~aPE~~~~~~----~~~~~~DvwslGv~l~elltg~ 213 (343)
T cd07851 169 DDEMT-------------GYVATRWYRAPEIMLNWM----HYNQTVDIWSVGCIMAELLTGK 213 (343)
T ss_pred ccccc-------------CCcccccccCHHHHhCCC----CCCchHhHHHHHHHHHHHHhCC
Confidence 43210 012334567777653221 3467899999999999999994
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=4.8e-29 Score=225.90 Aligned_cols=198 Identities=23% Similarity=0.271 Sum_probs=156.8
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------ 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 172 (317)
.++|++.+.||.|+||.||+|.... +++.||+|.+.... ....+.+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~-~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSD-CDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECC-CCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 3789999999999999999998877 78999999986653 24456788899999999999999999776543
Q ss_pred --------CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEE
Q 042913 173 --------HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIML 243 (317)
Q Consensus 173 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl 243 (317)
...|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 35799999995 688888743 45899999999999999999999999999999999999984 567999
Q ss_pred eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
+|||+++......... .......++..|.+||..... .....++|+|++|++++|+..|-
T Consensus 157 ~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~----~~~~~~~DiwSlGvil~el~~g~ 216 (342)
T cd07854 157 GDFGLARIVDPHYSHK-------GYLSEGLVTKWYRSPRLLLSP----NNYTKAIDMWAAGCIFAEMLTGK 216 (342)
T ss_pred CCcccceecCCccccc-------cccccccccccccCHHHHhCc----cccCchhhHHHHHHHHHHHHhCC
Confidence 9999997653321110 011112345568888865321 22456789999999999999883
No 368
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=2.7e-28 Score=218.37 Aligned_cols=195 Identities=21% Similarity=0.243 Sum_probs=158.1
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|...+.||+|+||.||+|.+.. ++..|++|++..... .......+.+|+++++.++|+|++++++++......|+||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSH-TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECC-CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 36677889999999999998876 789999999865432 2344567888999999999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
||+ .++|.+++... ...+++..++.++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 101 e~~-~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~--- 175 (313)
T cd06633 101 EYC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN--- 175 (313)
T ss_pred ecC-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC---
Confidence 999 56777777543 3568999999999999999999999999999999999999999999999999986432211
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
...+...|++||+..... ......+.|+|+++++++|+..|-
T Consensus 176 -----------~~~~~~~y~aPE~~~~~~--~~~~~~~sDv~slGvil~el~~g~ 217 (313)
T cd06633 176 -----------SFVGTPYWMAPEVILAMD--EGQYDGKVDVWSLGITCIELAERK 217 (313)
T ss_pred -----------CccccccccChhhccccC--CCCCCchhhHHHHHHHHHHHHhCC
Confidence 113445688888763211 112346789999999999999883
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=8.4e-29 Score=223.61 Aligned_cols=208 Identities=19% Similarity=0.179 Sum_probs=158.8
Q ss_pred CCeE-EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH------------HHHHHHHHHHHHHhcCCCCcceEE
Q 042913 100 RHLK-LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK------------KLSHVQMEAEILSMLDHPFLPTLY 166 (317)
Q Consensus 100 ~~y~-i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~ 166 (317)
++|. +.+.||.|+||.||+|.+.. +++.||+|++........ ....+.+|+++++.++|+||++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTL-TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECC-CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 4454 56779999999999998876 789999999865432210 012467899999999999999999
Q ss_pred EEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 167 AHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 167 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
+++......++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+||
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence 99999999999999994 799998854 356899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeecccc----cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 247 DLCFQSDVVPTLVETNVG----SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
|+++.............. .........+...|.+||+.... .......|+|+++++++|+..|-|
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA----EKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 999766422111000000 00011112234567778766421 123567899999999999999844
No 370
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=1.1e-28 Score=217.87 Aligned_cols=197 Identities=23% Similarity=0.315 Sum_probs=164.4
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
..+.|++.+.||+|++|.||+|.+.. ++..|++|++..... ....+.+|+++++.++|+||+++++.+......|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRA-TGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEcc-CCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 34568889999999999999998886 688999999976532 45678889999999999999999999999999999
Q ss_pred EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
|+||+++++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999999997642 3789999999999999999999999999999999999999999999999999865543221
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
. .....++..|++||+... .....+.|+|++|.+++|+..|.
T Consensus 172 ~----------~~~~~~~~~y~~PE~~~~-----~~~~~~~Dv~slGvil~~l~~g~ 213 (286)
T cd06614 172 K----------RNSVVGTPYWMAPEVIKR-----KDYGPKVDIWSLGIMCIEMAEGE 213 (286)
T ss_pred h----------hccccCCcccCCHhHhcC-----CCCCCccccHHHHHHHHHHHhCC
Confidence 1 011134456788886542 22356799999999999999984
No 371
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=1.2e-28 Score=215.69 Aligned_cols=187 Identities=23% Similarity=0.333 Sum_probs=150.3
Q ss_pred CCeEEeeee--cccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913 100 RHLKLVRHL--GTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 100 ~~y~i~~~l--g~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 176 (317)
+.|.+.+.+ |+|+||.||++.... ++..+|+|++........ |+.+...+ +|+||+++++.+...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKP-TQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcC-CCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 455666665 999999999998877 789999999875432211 22222222 6999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~ 255 (317)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||+++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999999999999654 4799999999999999999999999999999999999999988 9999999998765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.. ..++..|++||+.... ......|+|+++++++|+..| .|
T Consensus 164 ~~--------------~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~il~~l~~g~~p 205 (267)
T PHA03390 164 SC--------------YDGTLDYFSPEKIKGH-----NYDVSFDWWAVGVLTYELLTGKHP 205 (267)
T ss_pred cc--------------CCCCCcccChhhhcCC-----CCCchhhHHHHHHHHHHHHHCCCC
Confidence 21 1345567888776432 234578999999999999988 44
No 372
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=8.5e-29 Score=217.94 Aligned_cols=196 Identities=23% Similarity=0.337 Sum_probs=160.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 180 (317)
|++.+.||+|++|.||+|.... +++.|+||.+....... ......+|+..++.++ |+||+++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKE-TGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECC-CCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999876 68899999986653322 2233456899999999 9999999999999999999999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
|+ +++|.+++.......+++..++.++.|++.+|.|||+++++|+||+|+||+++.++.++|+|||++.........
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY-- 155 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc--
Confidence 99 889999887654457899999999999999999999999999999999999999999999999998765432211
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....++..|++||....+ .......|+|+++.+++|+..|-|
T Consensus 156 ---------~~~~~~~~~~aPE~~~~~----~~~~~~~Di~s~G~~l~el~~g~~ 197 (283)
T cd07830 156 ---------TDYVSTRWYRAPEILLRS----TSYSSPVDIWALGCIMAELYTLRP 197 (283)
T ss_pred ---------CCCCCcccccCceeeecC----cCcCCccchhhHHHHHHHHHhCCC
Confidence 112345568888865432 123467999999999999998843
No 373
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=1.1e-28 Score=223.45 Aligned_cols=193 Identities=21% Similarity=0.293 Sum_probs=156.6
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------ 172 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 172 (317)
.++|.+.+.||+|+||.||+|.+.. +++.||+|.+.+..........+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKR-TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCC-CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999998876 789999999876543344445678899999999999999999988644
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..+|+|+||+ ..+|..++ ...+++..+..++.|++.||.|||+.+|+||||||+|||++.++.++|+|||+++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 93 QDFYLVMPYM-QTDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ceEEEEeccc-ccCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 3569999999 45777665 245899999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... ...++..|++||..... ......+|+|++|++++|+..|-
T Consensus 168 ~~~~~-------------~~~~~~~y~aPE~~~~~----~~~~~~~Dv~slGvil~el~~g~ 212 (342)
T cd07879 168 DAEMT-------------GYVVTRWYRAPEVILNW----MHYNQTVDIWSVGCIMAEMLTGK 212 (342)
T ss_pred CCCCC-------------CceeeecccChhhhcCc----cccCchHHHHHHHHHHHHHHhCC
Confidence 32111 11234457888876431 22456799999999999999983
No 374
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=1.9e-28 Score=214.19 Aligned_cols=198 Identities=19% Similarity=0.283 Sum_probs=160.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh--------hcHHHHHHHHHHHHHHHh-cCCCCcceEEEEEEe
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--------LSAKKLSHVQMEAEILSM-LDHPFLPTLYAHLEV 171 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~ 171 (317)
.|++.+.||+|+||.||+|.+....++.+|+|.+.... .......++.+|+.++.. ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999876567899999885421 123445667788888865 789999999999999
Q ss_pred cCEEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDL 248 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~ 248 (317)
++..+++|||+++++|.+++.. .....+++..++.++.|++.+|.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 224568999999999999999999996 7899999999999999999999999999
Q ss_pred cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
+........ .....+...|.+||+.... ......|+|+++++++|+..|-
T Consensus 161 ~~~~~~~~~-----------~~~~~~~~~~~~Pe~~~~~-----~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 161 AKQKQPESK-----------LTSVVGTILYSCPEIVKNE-----PYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred eeecccccc-----------cccccCcccCcChhhhcCC-----CCchHHHHHHHHHHHHHHHhCC
Confidence 976543221 1112345668888877532 2357889999999999999883
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=2.3e-28 Score=218.22 Aligned_cols=196 Identities=21% Similarity=0.228 Sum_probs=158.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
+.|.+.+.||+|+||.||+|.+.. ++..+++|.+.... ........+.+|+++++.++|+|++++++++......++|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcC-CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 457788889999999999999876 68899999986432 2334456788899999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|||+. ++|.+++... ...+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++........
T Consensus 94 ~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (308)
T cd06634 94 MEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX- 170 (308)
T ss_pred EEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccc-
Confidence 99995 6887776433 35689999999999999999999999999999999999999999999999999876543221
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..+...|++||+...... .......|+|+++++++|+..|.
T Consensus 171 -------------~~~~~~y~aPE~~~~~~~--~~~~~~~Di~slG~il~el~~g~ 211 (308)
T cd06634 171 -------------FVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGITCIELAERK 211 (308)
T ss_pred -------------ccCCccccCHHHHhhccc--CCCCcccchHHHHHHHHHHHcCC
Confidence 123446888887532111 11245789999999999999984
No 376
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=1.8e-28 Score=215.67 Aligned_cols=196 Identities=19% Similarity=0.248 Sum_probs=163.1
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|++.+.||+|++|.||+|.... +++.+++|.+............+.+|+++++.++|+||+++++++..+...++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKL-TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCC-CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 5678899999999999998876 789999999876654445567788899999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
++ ++|.+++... ...+++..++.++.||+.||.|||+.+|+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---- 153 (283)
T cd05118 80 MD-TDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---- 153 (283)
T ss_pred cC-CCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc----
Confidence 95 5888887653 35789999999999999999999999999999999999999999999999999876644321
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
......++..|.+||..... .....+.|+|+++++++|+..|-
T Consensus 154 ------~~~~~~~~~~~~~PE~~~~~----~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 154 ------PYTHYVVTRWYRAPELLLGD----KGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred ------cccCccCcccccCcHHHhcC----CCCCchhHHHHHHHHHHHHHhCC
Confidence 01112355668888876432 23467799999999999999994
No 377
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=3.9e-28 Score=209.65 Aligned_cols=188 Identities=36% Similarity=0.576 Sum_probs=157.8
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
||+|+||.||++.... +++.+++|++...... ......+.+|+++++.++|+||+++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKD-TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECC-CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 6899999999998876 7899999998765432 2456788999999999999999999999999999999999999999
Q ss_pred hhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccc
Q 042913 187 LHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 187 L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++........
T Consensus 80 L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (250)
T cd05123 80 LFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--------- 148 (250)
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC---------
Confidence 99999653 4689999999999999999999999999999999999999999999999999876543321
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
......+...|.+||...... .....|+|+++++++|+..|
T Consensus 149 -~~~~~~~~~~~~~Pe~~~~~~-----~~~~~D~~slG~~~~~l~~g 189 (250)
T cd05123 149 -RTNTFCGTPEYLAPEVLLGKG-----YGKAVDWWSLGVLLYEMLTG 189 (250)
T ss_pred -cccCCcCCccccChHHhCCCC-----CCchhhHHHHHHHHHHHHHC
Confidence 011123455678888764332 45679999999999999988
No 378
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=3e-29 Score=229.26 Aligned_cols=195 Identities=24% Similarity=0.321 Sum_probs=159.6
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh--hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE--E
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY--I 175 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~ 175 (317)
+..+...+||+|+|-+||+|.+.. +|..||--.++... ..+...+++..|+.+|+.|+|+||+++|+.|.+..+ +
T Consensus 40 Ry~k~~evLGrGafKtVYka~De~-~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 40 RYLKFDEVLGRGAFKTVYKAFDEE-EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred ceeehhhhcccccceeeeeccccc-cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 445666779999999999998866 78888765544333 344667899999999999999999999999986554 8
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEc-cCCcEEEeeecccccC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLR-EDGHIMLSDFDLCFQS 252 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~-~~~~~kl~DFG~a~~~ 252 (317)
.+|+|++..|+|..|+++. +++....++.|++||++||.|||.+. |||||||.+||+|+ ..|.|||+|+|||...
T Consensus 119 n~iTEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeeeecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 8999999999999999774 77899999999999999999999985 99999999999998 5789999999999765
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
...... ...|+.-||+||.-.+++.+ ..|+.+-|-+++||.+| -|
T Consensus 197 r~s~ak------------svIGTPEFMAPEmYEE~YnE------~VDVYaFGMCmLEMvT~eYP 242 (632)
T KOG0584|consen 197 RKSHAK------------SVIGTPEFMAPEMYEENYNE------LVDVYAFGMCMLEMVTSEYP 242 (632)
T ss_pred hccccc------------eeccCccccChHHHhhhcch------hhhhhhhhHHHHHHHhccCC
Confidence 443321 12566678888866555555 45789999999999987 44
No 379
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=237.94 Aligned_cols=202 Identities=22% Similarity=0.290 Sum_probs=164.8
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCc----eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA----NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV 171 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 171 (317)
.+.....++.+.||+|.||.||.|......+. .||+|.+.+. .+.+....|.+|..+|+.++|||||+++|++..
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 35567888999999999999999998875554 4888988664 356777899999999999999999999999999
Q ss_pred cCEEEEEEcccCCCChhcccccCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQP-----NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
....++++|||+||+|..+|++.. ...+.....+.++.||++|++||+++++|||||-..|+||+....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999999997641 345788899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeecccccccccccc-cccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRR-KSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
|+|+.+-...-.. ...+ ..---||+||...+.+-. -..|+|+-|..++|+..
T Consensus 847 GlArDiy~~~yyr---------~~~~a~lPvkWm~PEsl~d~iFt-----skSDvWsFGVllWEifs 899 (1025)
T KOG1095|consen 847 GLARDIYDKDYYR---------KHGEAMLPVKWMPPESLKDGIFT-----SKSDVWSFGVLLWEIFS 899 (1025)
T ss_pred chhHhhhhchhee---------ccCccccceecCCHHHHhhcccc-----cccchhhhHHHHHHHHh
Confidence 9998432211110 0000 111359999988763332 56789999999999753
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=2.8e-28 Score=209.55 Aligned_cols=177 Identities=24% Similarity=0.252 Sum_probs=145.0
Q ss_pred cCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhcc
Q 042913 111 GNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSL 190 (317)
Q Consensus 111 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 190 (317)
|.||.||++.+.. +++.||+|.+.... ...+|...+....||||+++++++......|+||||+++++|.++
T Consensus 4 g~~~~v~~~~~~~-~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTR-TQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEcc-CCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 8999999999887 88999999997642 223344555556799999999999999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccc
Q 042913 191 LPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRR 270 (317)
Q Consensus 191 l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~ 270 (317)
+... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~------------- 140 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD------------- 140 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc-------------
Confidence 8653 4589999999999999999999999999999999999999999999999998865433110
Q ss_pred cccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 271 RRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 271 ~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
....+..|++||+... .....+.|+|+++++++|+..|.+
T Consensus 141 ~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~ 180 (237)
T cd05576 141 GEAVENMYCAPEVGGI-----SEETEACDWWSLGAILFELLTGKT 180 (237)
T ss_pred cCCcCccccCCcccCC-----CCCCchhhHHHHHHHHHHHHHCcc
Confidence 0123455888886532 234567899999999999999853
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=7e-31 Score=216.01 Aligned_cols=210 Identities=22% Similarity=0.250 Sum_probs=164.9
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE---
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE--- 170 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--- 170 (317)
+.....+.|.-+.+||+|.||.||+|+..+ +++.||+|++.-+...+..-....+|+++|..|+|+|++.+++.|.
T Consensus 11 P~~~~~~~yek~~kigqGtfgeVFkAr~~n-~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~ 89 (376)
T KOG0669|consen 11 PFCDEVSKYEKLAKIGQGTFGEVFKARSKN-TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA 89 (376)
T ss_pred CceecchHHHHHHhcCCchHHHHHHHhhcC-ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence 334455677888889999999999999888 8888999877544334444556788999999999999999987763
Q ss_pred -----ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEee
Q 042913 171 -----VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSD 245 (317)
Q Consensus 171 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~D 245 (317)
....+|+||.+| .-+|..++... ..+++..++..++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|
T Consensus 90 Tp~~r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred CCcccccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeec
Confidence 234589999999 56888888644 57799999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCCC
Q 042913 246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVPR 316 (317)
Q Consensus 246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p~ 316 (317)
||+|+.+..... +..+.+.-+..+.-|..||-.-+. .+.....|+|-.+|++.|+-+|-|.
T Consensus 168 FGlar~fs~~~n------~~kprytnrvvTLwYrppEllLG~----r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 168 FGLARAFSTSKN------VVKPRYTNRVVTLWYRPPELLLGD----REYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cccccceecccc------cCCCCcccceeeeecCCHHHhhcc----cccCCcchhHhHHHHHHHHHccCcc
Confidence 999987644332 122233344455556666655333 3345677899999999999998774
No 382
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.6e-30 Score=212.24 Aligned_cols=195 Identities=21% Similarity=0.257 Sum_probs=160.7
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----CEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----HYI 175 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 175 (317)
+.+--+.||.|+||.||.+.+.. +|+.|++|.+..-...-...+++.+|+++|..++|.|++..++...-. ..+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPR-dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPR-SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCC-CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 33444569999999999998887 899999999977665666778899999999999999999998876533 346
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|++.|++ ..+|..+|-. .+.++...++.++.||++||+|||+.+|+||||||.|+|++.+..+||||||+|+..+..
T Consensus 133 YV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8899999 7899998854 477899999999999999999999999999999999999999999999999999987765
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
.....+.. ..++-|.+||-..+..+. .-..|+||-+|+..|+.+
T Consensus 210 ~~~hMTqE---------VVTQYYRAPEiLMGaRhY----s~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 210 DRLNMTHE---------VVTQYYRAPELLMGARRY----TGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred hhhhhHHH---------HHHHHhccHHHhhcchhh----cCccceehhhHHHHHHHh
Confidence 55444432 455667788876655443 345689999999988754
No 383
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=2.8e-28 Score=214.31 Aligned_cols=196 Identities=24% Similarity=0.309 Sum_probs=161.2
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|++.+.||+|++|.||+|.... +++.|++|++............+..|+.+++.++|+||+++++++......++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKK-TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecC-CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 5677889999999999999877 789999999987643344456778899999999999999999999999999999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeec
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVET 261 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 261 (317)
++ ++|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||+++..........
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~- 156 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT- 156 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccC-
Confidence 95 69999996542 4689999999999999999999999999999999999999999999999999976543221100
Q ss_pred ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 262 NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.......|++||..... .......|+|+++++++|+..|-
T Consensus 157 ---------~~~~~~~~~aPE~~~~~----~~~~~~~Dv~slG~~l~~l~~~~ 196 (282)
T cd07829 157 ---------HEVVTLWYRAPEILLGS----KHYSTAVDIWSVGCIFAEMITGK 196 (282)
T ss_pred ---------ccccCcCcCChHHhcCC----cCCCccccHHHHHHHHHHHHhCC
Confidence 11223457888876432 13456789999999999999883
No 384
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-28 Score=226.02 Aligned_cols=202 Identities=21% Similarity=0.278 Sum_probs=168.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
.+.....+|.++||.|.||.|++|+++.. ....||||.++... .++....|..|+.||-+++||||++|.|+.....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~ 703 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK 703 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence 56677889999999999999999998762 23579999997654 6777789999999999999999999999999999
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
.+.+|.|||++|+|+.+|+.+. +.|...++..+++.|+.|++||-+.++|||||-..|||++.+-.+|++|||+++.++
T Consensus 704 PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999999998875 559999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (317)
.++....+..|. +.--.|-+||-+. +---.-..|+||-+..++|..
T Consensus 783 dd~~~~ytt~GG-------KIPiRWTAPEAIa-----~RKFTsASDVWSyGIVmWEVm 828 (996)
T KOG0196|consen 783 DDPEAAYTTLGG-------KIPIRWTAPEAIA-----YRKFTSASDVWSYGIVMWEVM 828 (996)
T ss_pred cCCCccccccCC-------ccceeecChhHhh-----hcccCchhhccccceEEEEec
Confidence 666333322222 1122366776554 222335778999999998853
No 385
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=3.3e-28 Score=211.66 Aligned_cols=197 Identities=23% Similarity=0.317 Sum_probs=154.8
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehh---hhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKD---LLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
+|.+.+.||+|+||.||++.+.. .+..+++|+++.. .........+..|+.+++.++||||+++++++......++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK-AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC-CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence 58999999999999999998876 4555666665432 2223344567789999999999999999999998899999
Q ss_pred EEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913 178 LIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~ 255 (317)
|+||+++++|.+++.. .....+++..++.++.|++.||.|||+.|++|+||||+||+++. +.++|+|||+++.....
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 9999999999988754 23456899999999999999999999999999999999999975 67999999998765432
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
..... ...+...|.+||+... .....+.|+|+++.+++|+..|.
T Consensus 159 ~~~~~----------~~~~~~~~~~pe~~~~-----~~~~~~~Dv~slG~~~~~l~~~~ 202 (260)
T cd08222 159 CDLAT----------TFTGTPYYMSPEALKH-----QGYDSKSDIWSLGCILYEMCCLA 202 (260)
T ss_pred ccccc----------CCCCCcCccCHHHHcc-----CCCCchhhHHHHHHHHHHHHhCC
Confidence 22111 1123445777776532 23345689999999999998883
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=2.3e-27 Score=222.04 Aligned_cols=210 Identities=17% Similarity=0.195 Sum_probs=145.9
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcC---------------CCCceEEEEEeehhhhcH--H----------HHHHH
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD---------------CTSANFALKVVDKDLLSA--K----------KLSHV 147 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~---------------~~~~~vavK~~~~~~~~~--~----------~~~~~ 147 (317)
..+..++|++.++||+|+||.||+|.+.. ..++.||||.+....... + ..+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 35678899999999999999999996521 135689999986532110 0 11223
Q ss_pred HHHHHHHHhcCCCCc-----ceEEEEEEe--------cCEEEEEEcccCCCChhcccccCC-------------------
Q 042913 148 QMEAEILSMLDHPFL-----PTLYAHLEV--------SHYICFLIDYCPNGDLHSLLPKQP------------------- 195 (317)
Q Consensus 148 ~~E~~~l~~l~h~~i-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~------------------- 195 (317)
..|+.++.+++|.++ +++++++.. .+..|+||||+++++|.+++....
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346677777766544 566776642 356899999999999999885421
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccc
Q 042913 196 ---NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRR 272 (317)
Q Consensus 196 ---~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
...+++..++.++.|++.+|.|||+.+|+||||||+|||++.++.+||+|||+++........ .. ...
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~--------~~g 370 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NP--------LYG 370 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-Cc--------ccc
Confidence 123456788899999999999999999999999999999999999999999999654322110 00 001
Q ss_pred cccCCCCCccccccccc-----------------ceeccchhhhccCCcccccccCCC
Q 042913 273 KSCNGFGSAKRRQENVM-----------------EFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 273 ~~~~~~~sp~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..+..|++||....... .....+...|+|+++++++|+..|
T Consensus 371 ~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~ 428 (507)
T PLN03224 371 MLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVP 428 (507)
T ss_pred CCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhC
Confidence 12345666665432110 001223456999999999999887
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=2.6e-27 Score=226.44 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=136.2
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCCC----CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEE--
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCT----SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAH-- 168 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-- 168 (317)
..+..++|.+.+.||+|+||.||+|.+.. + +..||+|.+......+ ...+| .++...+.++..++..
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~-~~~~~~~~vAvK~~~~~~~~e----~~~~e--~l~~~~~~~~~~~~~~~~ 199 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVN-KQSKKEGKYVLKKATEYGAVE----IWMNE--RVRRACPNSCADFVYGFL 199 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcC-CccccCcEEEEEEecccchhH----HHHHH--HHHhhchhhHHHHHHhhh
Confidence 44567899999999999999999999887 6 7899999875432111 11111 1111122222221111
Q ss_pred ----EEecCEEEEEEcccCCCChhcccccCCC------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042913 169 ----LEVSHYICFLIDYCPNGDLHSLLPKQPN------------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYR 226 (317)
Q Consensus 169 ----~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHr 226 (317)
......+++|+||+.+++|.+++..... .......+..++.||+.||.|||+.+|+||
T Consensus 200 ~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHR 279 (566)
T PLN03225 200 EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHR 279 (566)
T ss_pred cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2456779999999999999998864321 011234566899999999999999999999
Q ss_pred cCCCCcEEEcc-CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccc---------------
Q 042913 227 DLKPENILLRE-DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME--------------- 290 (317)
Q Consensus 227 Dikp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~--------------- 290 (317)
||||+|||++. ++.+||+|||+|+.+........ ....++..|++||........
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~---------~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~ 350 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIP---------KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV 350 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCC---------cccccCCCccChHHhhccCCCCCCccccccccccch
Confidence 99999999985 57999999999976543221110 111334568888843211110
Q ss_pred --eeccchhhhccCCcccccccCCC
Q 042913 291 --FVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 291 --~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
....+.+.|+|+++++++|+..|
T Consensus 351 l~~~~~~~k~DVwSlGviL~el~~~ 375 (566)
T PLN03225 351 LWQLNLPDRFDIYSAGLIFLQMAFP 375 (566)
T ss_pred hccccCCCCcccHHHHHHHHHHHhC
Confidence 01124566999999999998865
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=217.58 Aligned_cols=190 Identities=22% Similarity=0.282 Sum_probs=155.7
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 176 (317)
....|.+...+|.|+|+.|-.|.... +++.+++|++.+. .....+|+.++... +|+||+++.+.+.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~-t~~~~~vkii~~~------~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSP-TDQEPAVKIISKR------ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccc-cccchhheecccc------ccccccccchhhhhcCCCcceeecceecCCceee
Confidence 45788888899999999999998887 8899999999765 23345677665554 6999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE-ccCCcEEEeeecccccCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL-REDGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill-~~~~~~kl~DFG~a~~~~~~ 255 (317)
+|||++.|+.|.+.+... . .....+..|+.+|+.|+.|||++|||||||||+|||+ +..++++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~--~-~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSK--P-EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhc--c-hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999999888887543 2 2336777899999999999999999999999999999 58999999999999886554
Q ss_pred CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
..+. ..+..|.+||.. ...+....+|+||+|..++||.+|.+
T Consensus 470 ---~~tp----------~~t~~y~APEvl-----~~~~yt~acD~WSLGvlLy~ML~G~t 511 (612)
T KOG0603|consen 470 ---CDTP----------ALTLQYVAPEVL-----AIQEYTEACDWWSLGVLLYEMLTGRT 511 (612)
T ss_pred ---hccc----------chhhcccChhhh-----ccCCCCcchhhHHHHHHHHHHHhCCC
Confidence 1111 233455566544 46677899999999999999999954
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.3e-27 Score=220.31 Aligned_cols=201 Identities=20% Similarity=0.216 Sum_probs=168.7
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
.++.++.++||+|.||.|++|.|....|+ .||||.++.+.... ....|.+|+.+|.+|+|+|+++|||+..+ ....
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 45667888999999999999999875454 68999998765443 67889999999999999999999999876 7789
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
||||+++.|+|.+.|++.....|.......++.||+.||.||..+++|||||-..|||+-....|||+||||.+-+..+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 99999999999999988666778999999999999999999999999999999999999999999999999999887766
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
... .....+..-+.|.+||-. ++....-..|.|+-+.+++|+..+
T Consensus 267 d~Y-------vm~p~rkvPfAWCaPEsL-----rh~kFShaSDvWmyGVTiWEMFty 311 (1039)
T KOG0199|consen 267 DMY-------VMAPQRKVPFAWCAPESL-----RHRKFSHASDVWMYGVTIWEMFTY 311 (1039)
T ss_pred cce-------EecCCCcCcccccCHhHh-----ccccccccchhhhhhhhHHhhhcc
Confidence 443 111223444567777643 444455778999999999999876
No 390
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=2.4e-27 Score=212.23 Aligned_cols=198 Identities=20% Similarity=0.239 Sum_probs=161.9
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC------CCCcceEEE
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD------HPFLPTLYA 167 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~ 167 (317)
-+.+...+|.|....|+|-|++|.+|.+.. .+..||||+|+.... ..+.=+.|++||++|+ .-|+++|+-
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~-r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQA-RGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccC-CCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 456677899999999999999999999887 677999999987533 2344577999999995 347899999
Q ss_pred EEEecCEEEEEEcccCCCChhcccccC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEee
Q 042913 168 HLEVSHYICFLIDYCPNGDLHSLLPKQ-PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSD 245 (317)
Q Consensus 168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~D 245 (317)
.|...+++|||||-+ ..+|.++|++. .+-.+....++.++.|+..||+.|...||+|.||||+|||+++ ...+||||
T Consensus 502 ~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred HhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence 999999999999999 88999999875 2455788899999999999999999999999999999999996 45799999
Q ss_pred ecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
||.|.....+. .+.-..+--|+.+++.-+....+-.|+||-+|+++|++.|
T Consensus 581 fGSA~~~~ene-----------------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtG 631 (752)
T KOG0670|consen 581 FGSASFASENE-----------------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTG 631 (752)
T ss_pred Ccccccccccc-----------------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecc
Confidence 99986543322 1111122234455566677778888999999999999999
No 391
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.1e-26 Score=193.39 Aligned_cols=196 Identities=31% Similarity=0.415 Sum_probs=162.2
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
|.+.+.||.|++|.||++.... +++.+++|.+...... ...+.+.+|++.++.++|+|++++++++......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKG-TGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcC-CCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5678899999999999998886 6889999999765322 2567889999999999999999999999988999999999
Q ss_pred cCCCChhcccccCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeee
Q 042913 182 CPNGDLHSLLPKQPNNR-FSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVE 260 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~-~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 260 (317)
+++++|.+++... .. +++..+..++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||++........
T Consensus 79 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--- 153 (225)
T smart00221 79 CEGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--- 153 (225)
T ss_pred cCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc---
Confidence 9988999998664 33 78999999999999999999999999999999999999999999999999877644320
Q ss_pred cccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 261 TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
.......+...|++||... .........|+|+++++++|+..|-
T Consensus 154 ------~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Dv~~lG~~~~~l~~g~ 197 (225)
T smart00221 154 ------ALLKTVKGTPFYLAPEVLL----GGKGYGEAVDIWSLGVILYELLWGP 197 (225)
T ss_pred ------ccccceeccCCcCCHhHhc----CCCCCCchhhHHHHHHHHHHHHHCC
Confidence 0111223455688888764 2223334789999999999999883
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=7.6e-28 Score=195.61 Aligned_cols=187 Identities=19% Similarity=0.288 Sum_probs=149.2
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEec--CE
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVS--HY 174 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~--~~ 174 (317)
..++|++.+++|+|.|+.||.|.... +++.++||+++ +-..+.+.+|+.||+.|. ||||+++++...+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~-~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINIT-NNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccC-CCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 34789999999999999999998766 68899999985 344578899999999998 99999999998654 55
Q ss_pred EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCC
Q 042913 175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSD 253 (317)
Q Consensus 175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~ 253 (317)
..||+||+.+.+...+. ..++...++.++.+++.||.|||+.||+|||+||.|++||. .-.++|+|+|+|..+.
T Consensus 110 paLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 78999999887777665 45788899999999999999999999999999999999995 4579999999997765
Q ss_pred CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913 254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 310 (317)
+...... +....-|--||-. -.+....+.-|+||+|||+..+
T Consensus 185 p~~eYnV-----------RVASRyfKGPELL----Vdy~~YDYSLD~WS~GcmlA~m 226 (338)
T KOG0668|consen 185 PGKEYNV-----------RVASRYFKGPELL----VDYQMYDYSLDMWSLGCMLASM 226 (338)
T ss_pred CCceeee-----------eeehhhcCCchhe----eechhccccHHHHHHHHHHHHH
Confidence 5443211 1111223334433 3344556778899999998765
No 393
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.94 E-value=2.2e-26 Score=190.68 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=109.9
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHH------------------------HHHHHHHHHHHHhcCCC
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKK------------------------LSHVQMEAEILSMLDHP 160 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~ 160 (317)
.+.||+|+||.||+|... +|+.||+|+++........ .....+|++++..+.++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~--~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA--NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCccccccceEEEEEECC--CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 356999999999999875 6899999999765321111 12234599999999887
Q ss_pred CcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeccCCCCcEEEccCC
Q 042913 161 FLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYL-HALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 161 ~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~L-H~~~ivHrDikp~Nill~~~~ 239 (317)
++.....+... ..+|||||++++++...+.. ...+++..++.++.|++.+|.+| |+.||+||||||+|||++ ++
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CC
Confidence 76443332222 23899999988776654322 35689999999999999999999 799999999999999998 57
Q ss_pred cEEEeeecccccCCC
Q 042913 240 HIMLSDFDLCFQSDV 254 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~ 254 (317)
.++|+|||+|...+.
T Consensus 155 ~v~LiDFG~a~~~~~ 169 (190)
T cd05147 155 KLYIIDVSQSVEHDH 169 (190)
T ss_pred cEEEEEccccccCCC
Confidence 899999999975443
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-28 Score=222.18 Aligned_cols=199 Identities=22% Similarity=0.318 Sum_probs=170.2
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+|.++..+|.|.||.||++++.. +++..|+|+++.. ..+.+.-++.|+-+++.++|||||.+++.+.....+|++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~-s~elaavkvVkLe--p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKR-SGELAAVKVVKLE--PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccc-cCchhhheeeecc--CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 4689999999999999999999988 8999999999765 446667789999999999999999999999999999999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||||.+|+|.++..- .+++++.++..+++..+.+|+|||..|-+|||||-.|||+++.|.+||+|||.+.++...-.
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~- 167 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA- 167 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh-
Confidence 999999999999854 58899999999999999999999999999999999999999999999999999987655433
Q ss_pred eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV 314 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~ 314 (317)
++.--.|+.-||+||...-+ .-....-.+|+|..+.+.+|+..-.
T Consensus 168 ---------KrksfiGtpywmapEvaave--rkggynqlcdiwa~gitAiel~eLq 212 (829)
T KOG0576|consen 168 ---------KRKSFIGTPYWMAPEVAAVE--RKGGYNQLCDIWALGITAIELGELQ 212 (829)
T ss_pred ---------hhhcccCCccccchhHHHHH--hcccccccccccccccchhhhhhcC
Confidence 33344566678999875421 1223345789999999999987653
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=217.86 Aligned_cols=187 Identities=22% Similarity=0.258 Sum_probs=152.1
Q ss_pred eeecccCCeE-EEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGR-VFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~-Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
+.+|.|.-|+ ||+|... ++.||||.+-. +....+++|+..|+.-+ |||||++|+.-.+..+.|++.|.|
T Consensus 515 eilG~Gs~Gt~Vf~G~ye---~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE---GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred HHcccCCCCcEEEEEeeC---CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 4588999885 8999877 58999998743 44467889999999885 999999999999999999999999
Q ss_pred CCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---C--CcEEEeeecccccCCCCC
Q 042913 184 NGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---D--GHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 184 ~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~--~~~kl~DFG~a~~~~~~~ 256 (317)
..+|.+++... ..........+.++.|++.||+|||+.+||||||||.||||+. + .+++|+|||+|+++....
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 89999999763 1111111345778899999999999999999999999999975 3 479999999999998776
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.-... .....|+.||.+||........ ...|+.++||..++-..|
T Consensus 666 sS~~r-------~s~~sGt~GW~APE~L~~~~~~-----~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 666 SSFSR-------LSGGSGTSGWQAPEQLREDRKT-----QAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred chhhc-------ccCCCCcccccCHHHHhccccC-----cccchhhcCceEEEEecC
Confidence 54333 2334789999999987765554 488999999999988777
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-27 Score=194.57 Aligned_cols=197 Identities=21% Similarity=0.288 Sum_probs=158.7
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEE-EEecCEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAH-LEVSHYIC 176 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~-~~~~~~~~ 176 (317)
.+.|.|.+.||+|.||.+.+|+++. ++..+++|.+++.. ...+.|.+|..---.| .|.||+.-|+. |+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~-s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQ-SKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccC-CceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 3689999999999999999999887 88999999998753 3446677787665445 48999977754 67888999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc--cCCcEEEeeecccccCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR--EDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~--~~~~~kl~DFG~a~~~~~ 254 (317)
+++||++.|+|..-+.. ..+-+...+.++.|++.||.|||++++||||||.+||||- +..+|||||||+.++.+.
T Consensus 99 F~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999999998854 4578888999999999999999999999999999999995 344899999999876543
Q ss_pred CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.-. +......|-.||.+..-.++.--....-|+|..|..+..-.+| +|
T Consensus 176 tV~-------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~P 224 (378)
T KOG1345|consen 176 TVK-------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFP 224 (378)
T ss_pred eeh-------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCc
Confidence 221 2344556788887766655544445556799999999999999 55
No 397
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=9.2e-27 Score=205.25 Aligned_cols=215 Identities=22% Similarity=0.237 Sum_probs=162.4
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-----cHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-----SAKKLSHVQMEAEILSMLDHPFLPTLYAHLE 170 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 170 (317)
....++|-++..||+|||+.||+|.+.. ..+.||+|+-..... .+...+...+|.+|.+.|+||.||++|++|.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~-EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs 537 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLT-EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS 537 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccc-hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee
Confidence 3445789999999999999999998876 689999998643221 2234566788999999999999999999996
Q ss_pred -ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEc---cCCcEEEe
Q 042913 171 -VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLR---EDGHIMLS 244 (317)
Q Consensus 171 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~---~~~~~kl~ 244 (317)
+.+.+|-|+|||+|.+|.-|++. ++.+++..++.|+.||+.||.||.+.. |||-||||.|||+. .-|.+||.
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred eccccceeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence 55678999999999999999965 477999999999999999999999864 99999999999995 35689999
Q ss_pred eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCCC
Q 042913 245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPRG 317 (317)
Q Consensus 245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~~ 317 (317)
|||+++..+...... +..........|++-|..||.-..+-..- --.-+.|+|+.+.+++.-.-| -|.|
T Consensus 616 DFGLSKIMdddSy~~---vdGmeLTSQgAGTYWYLPPEcFvVgkePP-KIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNS---VDGMELTSQGAGTYWYLPPECFVVGKEPP-KISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred ecchhhhccCCccCc---ccceeeecccCceeeecCcceeecCCCCC-ccccceeeEeeehhhhhhhccCCCCC
Confidence 999999887655321 11112223345566666666543221000 002456889999888765555 4443
No 398
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=210.32 Aligned_cols=199 Identities=20% Similarity=0.273 Sum_probs=161.3
Q ss_pred CccccCCeEEeeeecccCCeEEEEEEEcCC-CC--ceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913 95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDC-TS--ANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV 171 (317)
Q Consensus 95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 171 (317)
-.+......+.+.||+|-||.||+|.+... .| -.||||..+.+. ..+..+.|..|..+|+.++||||++++|++.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 345556667788999999999999988652 23 358888887654 45557899999999999999999999999875
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
...|+|||+++.|.|..|++.+ ...++......++.||+.||.|||+..+|||||-..|||+.....|||+|||+++.
T Consensus 463 -~P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred -cceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 4689999999999999999765 46689999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 310 (317)
++...-...+ ....---||+||-+ +|-.-.-..|+|.-+.+++|.
T Consensus 541 ~ed~~yYkaS---------~~kLPIKWmaPESI-----NfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 541 LEDDAYYKAS---------RGKLPIKWMAPESI-----NFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred ccccchhhcc---------ccccceeecCcccc-----chhcccchhhHHHHHHHHHHH
Confidence 7665432211 11222348888744 344445788899999888885
No 399
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93 E-value=3.4e-26 Score=233.49 Aligned_cols=182 Identities=16% Similarity=0.179 Sum_probs=148.1
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
..+.....||+|+||.||+|.... ++..||+|.+..... ....|++++++++|||||++++++...+..|+||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIK-NGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECC-CCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 345667789999999999998876 789999998864321 1234688899999999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH---HcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH---ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
||+++|+|.++++ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+.......
T Consensus 763 Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~ 836 (968)
T PLN00113 763 EYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT 836 (968)
T ss_pred eCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC
Confidence 9999999999994 3789999999999999999999 6699999999999999998888776 66653321110
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
...++.+|++||+... .....+.|+|+.|++++|+..|
T Consensus 837 --------------~~~~t~~y~aPE~~~~-----~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 837 --------------KCFISSAYVAPETRET-----KDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred --------------CccccccccCcccccC-----CCCCcccchhhHHHHHHHHHhC
Confidence 1134567888887643 2345679999999999999998
No 400
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=9.1e-27 Score=212.48 Aligned_cols=202 Identities=17% Similarity=0.230 Sum_probs=167.4
Q ss_pred CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913 93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS 172 (317)
Q Consensus 93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 172 (317)
....+...+..+..+||-|.||.||.|.|++ -.-.||||.++.+ ....++|..|..+|+.++|||+|+|+|+|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk-yslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeec-cceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4556667788889999999999999999998 6678999998764 34567899999999999999999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
-.+|||.|||..|+|.+||++.....++.-.++.++.||..|++||..+++|||||-..|+|+.++..|||+|||+++..
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999998877777888888999999999999999999999999999999999999999999999865
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
..+.- ....|. ..---|-+||-.. |.-...+.|+|.-+..++|+++
T Consensus 416 tgDTY--TAHAGA-------KFPIKWTAPEsLA-----yNtFSiKSDVWAFGVLLWEIAT 461 (1157)
T KOG4278|consen 416 TGDTY--TAHAGA-------KFPIKWTAPESLA-----YNTFSIKSDVWAFGVLLWEIAT 461 (1157)
T ss_pred cCCce--ecccCc-------cCcccccCccccc-----ccccccchhhHHHHHHHHHHHh
Confidence 44321 122222 1222366776554 3444567889999888888764
No 401
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.93 E-value=4.7e-25 Score=183.12 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=111.7
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH------------------------HHHHHHHHHHHHHHhcCCC
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA------------------------KKLSHVQMEAEILSMLDHP 160 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~~l~h~ 160 (317)
.+.||+|+||+||+|.+. +|+.||||+++...... .....+.+|.+.+.++.|+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~--~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG--DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC--CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 467999999999999876 68999999998652110 0122346789999999999
Q ss_pred CcceEEEEEEecCEEEEEEcccCCCChhcc-cccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccC
Q 042913 161 FLPTLYAHLEVSHYICFLIDYCPNGDLHSL-LPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLRED 238 (317)
Q Consensus 161 ~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~ 238 (317)
++.....+.... .||||||++|+++... +. ...++...+..++.|++.+|.+||. .||+||||||+|||++ +
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C
Confidence 875444333322 4899999988755433 32 2457888999999999999999999 9999999999999999 8
Q ss_pred CcEEEeeecccccCCC
Q 042913 239 GHIMLSDFDLCFQSDV 254 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~ 254 (317)
+.++|+|||+|...+.
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 9999999999987654
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.92 E-value=1.6e-24 Score=180.88 Aligned_cols=186 Identities=30% Similarity=0.447 Sum_probs=152.8
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCCh
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDL 187 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 187 (317)
||+|.+|.||++.... +++.+++|++....... ....+.+|+++++.+.|++|+++++++......++++|++.+++|
T Consensus 1 l~~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKK-TGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecC-CCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999998876 68999999997653221 456789999999999999999999999998999999999988999
Q ss_pred hcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCCCCCeeecccccc
Q 042913 188 HSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVVPTLVETNVGSA 266 (317)
Q Consensus 188 ~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~ 266 (317)
.+++.... ..+++..++.++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99986532 46899999999999999999999999999999999999998 89999999999876544321
Q ss_pred cccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913 267 TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 310 (317)
..........|.+|+..... ...+...|+|+++++++|+
T Consensus 149 -~~~~~~~~~~~~~pe~~~~~----~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 149 -LLKTIVGTPAYMAPEVLLGK----GYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred -hhhcccCCCCccChhHhccc----CCCCchhhhHHHHHHHHHH
Confidence 11122455567777766443 3456778899999888764
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=5.3e-26 Score=192.99 Aligned_cols=193 Identities=16% Similarity=0.212 Sum_probs=154.4
Q ss_pred ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe------
Q 042913 98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV------ 171 (317)
Q Consensus 98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 171 (317)
...+|.-++.+|.|.- .|-.+.+.- .++.||+|.+..........++.++|..++..++|+||++++.+|.-
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v-~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQV-LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhh-ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 3468888899999988 565565554 78999999987665555566788999999999999999999998853
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
....|+|||+| ..+|...+. ..++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||+|+.
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence 34589999999 889998885 3477889999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
-+.. +..+.. ..+.-|-+||..-+=. --...|+||.||.+-|+..|
T Consensus 168 e~~~--~~mtpy---------VvtRyyrapevil~~~-----~ke~vdiwSvGci~gEli~~ 213 (369)
T KOG0665|consen 168 EDTD--FMMTPY---------VVTRYYRAPEVILGMG-----YKENVDIWSVGCIMGELILG 213 (369)
T ss_pred cCcc--cccCch---------hheeeccCchheeccC-----CcccchhhhhhhHHHHHhhc
Confidence 6554 222221 3344456666543211 23567899999999999988
No 404
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=8.5e-25 Score=187.01 Aligned_cols=182 Identities=34% Similarity=0.484 Sum_probs=151.6
Q ss_pred CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhccc
Q 042913 112 NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLL 191 (317)
Q Consensus 112 ~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 191 (317)
+||.||+|.+.. +++.+++|++........ .+.+.+|+++++.++|+||+++++.+......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKK-TGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECC-CCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999876 789999999976532221 578899999999999999999999999999999999999888999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccccccccc
Q 042913 192 PKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRR 271 (317)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
... ..+++..++.++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||++....... ....
T Consensus 79 ~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----------~~~~ 145 (244)
T smart00220 79 KKR--GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----------LLTT 145 (244)
T ss_pred Hhc--cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----------cccc
Confidence 654 338999999999999999999999999999999999999999999999999997765432 1112
Q ss_pred ccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 272 RKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 272 ~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..+...|.+||... ........|+|+++++++|+..|
T Consensus 146 ~~~~~~~~~pE~~~-----~~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 146 FVGTPEYMAPEVLL-----GKGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ccCCcCCCCHHHHc-----cCCCCchhhHHHHHHHHHHHHhC
Confidence 23455677787664 22234578999999999999988
No 405
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=2.1e-25 Score=208.95 Aligned_cols=197 Identities=20% Similarity=0.207 Sum_probs=154.9
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCC---CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDC---TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
...+..++||+|+||+||+|.+-.. -+-+||+|++.... ..+...++..|+-+|..++|||++++++++.... +.
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 3455678999999999999988652 12378999886543 4455678899999999999999999999987665 88
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
||++|+++|.|.++++.. ...+-.+..+.|+.||++||.|||++++|||||-..||||.....+||.|||+|+.+....
T Consensus 774 lvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999999875 4668888999999999999999999999999999999999999999999999999887766
Q ss_pred CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
....+..|. +.+.++.-+....-.-.-..|+|+-+.+.+|+.+
T Consensus 853 ~ey~~~~gK-------------~pikwmale~i~~~~~thqSDVWsfGVtiWElmT 895 (1177)
T KOG1025|consen 853 KEYSAPGGK-------------VPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT 895 (1177)
T ss_pred ccccccccc-------------cCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence 544333322 2233333222222222345678999888888753
No 406
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.6e-23 Score=184.45 Aligned_cols=136 Identities=28% Similarity=0.435 Sum_probs=120.5
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-----C---CCcceEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-----H---PFLPTLYA 167 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~~iv~~~~ 167 (317)
.+..++|.+.++||.|-|++||+|.+.. ..+.||+|+++.. +...+....||++|++++ | .+||+|++
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq-~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQ-NKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeecc-CCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 3444999999999999999999998887 7899999999754 355567888999999884 2 46999999
Q ss_pred EEEe----cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEc
Q 042913 168 HLEV----SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLR 236 (317)
Q Consensus 168 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~ 236 (317)
.|.. +.++|||+|++ |.+|..+|.....+.++...++.|++||+.||.|||. .||||-||||+|||+.
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9964 56899999999 9999999999889999999999999999999999996 6999999999999994
No 407
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.91 E-value=6.8e-24 Score=178.27 Aligned_cols=144 Identities=17% Similarity=0.204 Sum_probs=116.8
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHH------HHHHHHHHHhcCCCCcceEEEE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSH------VQMEAEILSMLDHPFLPTLYAH 168 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~------~~~E~~~l~~l~h~~iv~~~~~ 168 (317)
++..++|++.+.||.|+||.||++.. . +..+|+|+++...... ..... +.+|+..+.++.|++|..+.++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~--~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-D--YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-C--CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 35578999999999999999999654 2 5689999997654333 22223 5789999999999999999888
Q ss_pred EEec--------CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc
Q 042913 169 LEVS--------HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH 240 (317)
Q Consensus 169 ~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~ 240 (317)
+... +..+++|||++|.+|.++.. +++ ..+.+++.+|..||+.|++||||||.||+++.+|
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-
Confidence 6533 35899999999999988741 233 2456999999999999999999999999999988
Q ss_pred EEEeeecccccCC
Q 042913 241 IMLSDFDLCFQSD 253 (317)
Q Consensus 241 ~kl~DFG~a~~~~ 253 (317)
++|+|||......
T Consensus 173 i~liDfg~~~~~~ 185 (232)
T PRK10359 173 LRIIDLSGKRCTA 185 (232)
T ss_pred EEEEECCCccccc
Confidence 9999999987653
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=1.8e-24 Score=189.74 Aligned_cols=208 Identities=21% Similarity=0.292 Sum_probs=161.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEec
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVS 172 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~ 172 (317)
....+.|+++.+||+|.|+.||++.+... ..+.||+|.+... ....++.+|+++|..+. +.||+++.+++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc----cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34557899999999999999999977653 5789999998654 23356899999999986 89999999999999
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeeccccc
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIMLSDFDLCFQ 251 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl~DFG~a~~ 251 (317)
+...+||||+++....+++.. ++...++.+++.++.||.++|.+|||||||||.|+|.+ ..+.-.|+|||+|..
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence 999999999999999998844 67889999999999999999999999999999999998 467899999999973
Q ss_pred CCCCC-------------Ce-e------------e--------cccccccccccccccCCCCCcccccccccceeccchh
Q 042913 252 SDVVP-------------TL-V------------E--------TNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRR 297 (317)
Q Consensus 252 ~~~~~-------------~~-~------------~--------~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~ 297 (317)
.+... +. . . .+.+....+..+.|+.||-+||.. .....+.-.
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL----~k~~~Qtta 258 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVL----FRCPRQTTA 258 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHH----hhccCcCCc
Confidence 22111 00 0 0 011222334445566666555543 234456778
Q ss_pred hhccCCcccccccCCC-CCC
Q 042913 298 EQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 298 ~~~~~~~~~~~e~~~G-~p~ 316 (317)
.|+|+-|.+++=+..+ .|+
T Consensus 259 iDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred cceeeccceeehhhcccccc
Confidence 8999999999888777 554
No 409
>PRK10345 hypothetical protein; Provisional
Probab=99.90 E-value=3.8e-23 Score=173.05 Aligned_cols=137 Identities=21% Similarity=0.245 Sum_probs=105.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-----CCCCcceEEEEEEecC---E-E
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-----DHPFLPTLYAHLEVSH---Y-I 175 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~---~-~ 175 (317)
.+.||+|+||.||. +.. ++.. +||++.... ....+.+.+|+.+++.+ .||||++++++++++. . +
T Consensus 7 ~~~LG~G~~~~Vy~--hp~-~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPE-DAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCC-CcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 35699999999995 333 4444 699886542 22346789999999999 5799999999998763 4 3
Q ss_pred EEEEcc--cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHH-HHHHHcCCeeccCCCCcEEEccC----CcEEEeeecc
Q 042913 176 CFLIDY--CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGL-EYLHALGIIYRDLKPENILLRED----GHIMLSDFDL 248 (317)
Q Consensus 176 ~lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al-~~LH~~~ivHrDikp~Nill~~~----~~~kl~DFG~ 248 (317)
.+|+|| +.+++|.+++.+ ..+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||+-
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 478999 557999999955 236655 35678888787 89999999999999999999743 3799999555
Q ss_pred cccC
Q 042913 249 CFQS 252 (317)
Q Consensus 249 a~~~ 252 (317)
+..+
T Consensus 156 ~~~~ 159 (210)
T PRK10345 156 ESTF 159 (210)
T ss_pred Ccce
Confidence 5443
No 410
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=3.9e-23 Score=199.52 Aligned_cols=206 Identities=20% Similarity=0.263 Sum_probs=163.5
Q ss_pred CCccccCCeEEeeeecccCCeEEEEEEEcCC------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEE
Q 042913 94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDC------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLY 166 (317)
Q Consensus 94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~ 166 (317)
...+..+++++.+.||+|.||+|++|..... ....||||.++..... ...+.+..|+++|+.+. |+||+.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 4456666778888999999999999976531 1457999998766544 67788999999999985 99999999
Q ss_pred EEEEecCEEEEEEcccCCCChhcccccCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCc
Q 042913 167 AHLEVSHYICFLIDYCPNGDLHSLLPKQP------------N--NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPEN 232 (317)
Q Consensus 167 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~--~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~N 232 (317)
|++...+.+++|+||+..|+|.++++... . ..+.....+.++.||+.|++||++..+|||||-..|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999999999999997653 1 138888999999999999999999999999999999
Q ss_pred EEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 233 ILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 233 ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
||+.++..+||+|||+|+............. ..+ --..||+||-... ..|. ...|+||-|..++|+..
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~------~~~-LP~kWmApEsl~~--~~ft---~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSS------AGT-LPVKWMAPESLFD--RVFT---SKSDVWSFGILLWEIFT 516 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCC------CCc-cceeecCHHHhcc--Cccc---ccchhhHHHHHHHHHhh
Confidence 9999999999999999986544333221100 000 1223999976654 4444 44589999999999754
No 411
>smart00090 RIO RIO-like kinase.
Probab=99.89 E-value=1.5e-22 Score=173.35 Aligned_cols=147 Identities=18% Similarity=0.154 Sum_probs=114.6
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----------------------HHHHHHHHHHHHHHhcC
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----------------------KKLSHVQMEAEILSMLD 158 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 158 (317)
-|.+.+.||+|+||.||+|.+...+|+.||+|+++...... .....+.+|+++++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998333378999999997542110 01234678999999997
Q ss_pred CC--CcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CeeccCCCCcEEE
Q 042913 159 HP--FLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-IIYRDLKPENILL 235 (317)
Q Consensus 159 h~--~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivHrDikp~Nill 235 (317)
+. .++++++. ...++||||+++.+|...... ...+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34555543 235899999988888766522 244566677899999999999999999 9999999999999
Q ss_pred ccCCcEEEeeecccccCCC
Q 042913 236 REDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 236 ~~~~~~kl~DFG~a~~~~~ 254 (317)
+ ++.++|+|||.|...+.
T Consensus 183 ~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 183 H-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred E-CCCEEEEEChhhhccCC
Confidence 9 88999999999986544
No 412
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.6e-21 Score=160.75 Aligned_cols=164 Identities=20% Similarity=0.236 Sum_probs=117.7
Q ss_pred EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH--HHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEc
Q 042913 104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK--KLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 180 (317)
+...|++|+||+||++.. .+.+++.+.+........ ....+.+|+++|++|. |++|++++++ +..+++||
T Consensus 6 ~~~~l~~~~f~~v~~~~~---~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG---GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cceeecCCCcceEEEeec---CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 456799999999997644 367888776654322111 1235789999999996 5889999986 34699999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC-CCCcEEEccCCcEEEeeecccccCCCCCCe-
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDL-KPENILLREDGHIMLSDFDLCFQSDVVPTL- 258 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDi-kp~Nill~~~~~~kl~DFG~a~~~~~~~~~- 258 (317)
|+.|.+|...+.. . ...++.|++.+|++||++||+|||| ||+|||++.++.++|+|||+|.........
T Consensus 79 yI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 79 YLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred eecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 9999888754421 1 1347789999999999999999999 799999999999999999999865543321
Q ss_pred ---eecccccccccccccccCCCCCcccc
Q 042913 259 ---VETNVGSATRRRRRKSCNGFGSAKRR 284 (317)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~~~~sp~~~ 284 (317)
........... .+..|.++.+|+..
T Consensus 150 r~L~~rDl~~llk~-~~~y~~~~l~~~~~ 177 (218)
T PRK12274 150 RLLAREDLRHLLKH-KRMYCPAALTPVER 177 (218)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCCCCHHHH
Confidence 00011111111 24478888888754
No 413
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.86 E-value=1.7e-21 Score=162.88 Aligned_cols=140 Identities=21% Similarity=0.179 Sum_probs=110.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH--------------------HHHHHHHHHHHHHHhcCCC-
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA--------------------KKLSHVQMEAEILSMLDHP- 160 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~h~- 160 (317)
|.+.+.||+|+||.||++... +++.||||+++...... ........|+.++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP--DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC--CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 778889999999999999765 58999999876432110 0112367788899988877
Q ss_pred -CcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 161 -FLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 161 -~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
.++.+++. ...++||||++|++|.++... .....++.+++.++.++|+.||+|+||||+||++++++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 45555542 445899999999998776521 23567889999999999999999999999999999999
Q ss_pred cEEEeeecccccCCCC
Q 042913 240 HIMLSDFDLCFQSDVV 255 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~~ 255 (317)
.++|+|||+|...+..
T Consensus 163 ~~~liDfg~~~~~~~~ 178 (198)
T cd05144 163 KIYIIDWPQMVSTDHP 178 (198)
T ss_pred cEEEEECCccccCCCc
Confidence 9999999999766543
No 414
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.6e-21 Score=163.24 Aligned_cols=138 Identities=20% Similarity=0.229 Sum_probs=113.6
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc------HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS------AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+.||+|++|.||+|.+. +..+++|+....... ......+.+|++++..+.|++|+....++......+++|
T Consensus 2 ~~l~~G~~~~vy~~~~~---~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL---GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEeeC---CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 56999999999999763 578999986543211 112346788999999999998877776666777889999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
||++|++|.+++... .. ....++.+++.+|.+||+.+++|+|++|.|||++ ++.++|+|||++....
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999999998542 12 7788999999999999999999999999999999 7899999999987643
No 415
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=1.4e-20 Score=167.09 Aligned_cols=202 Identities=29% Similarity=0.404 Sum_probs=155.7
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH-HHHHHHHHHHHHHhcCCC-CcceEEEEEEecCEEEEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK-KLSHVQMEAEILSMLDHP-FLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~ 179 (317)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +++++++.+......++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEE
Confidence 788999999999999999876 6789999977654443 567889999999999988 7999999998778789999
Q ss_pred cccCCCChhcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCCCC
Q 042913 180 DYCPNGDLHSLLPKQPN-NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~~~ 257 (317)
+++.+++|.+++..... ..+.......++.|++.++.|+|..+++||||||+||+++..+ .++++|||+++.......
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999999977754321 2689999999999999999999999999999999999999888 799999999985443322
Q ss_pred eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
..... .......++..|.+|+...... ........|+|+++.+..++..|
T Consensus 158 ~~~~~----~~~~~~~~t~~~~~pe~~~~~~--~~~~~~~~D~~s~g~~~~~~~~~ 207 (384)
T COG0515 158 TSSIP----ALPSTSVGTPGYMAPEVLLGLS--LAYASSSSDIWSLGITLYELLTG 207 (384)
T ss_pred ccccc----ccccccccccccCCHHHhcCCC--CCCCCchHhHHHHHHHHHHHHhC
Confidence 11000 0112223444555555443211 13556778889888887777776
No 416
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.85 E-value=7.6e-21 Score=181.79 Aligned_cols=141 Identities=21% Similarity=0.186 Sum_probs=113.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh------cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH 173 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 173 (317)
..|...+.||+|+||.||++.+.. ..+++|+...... .....+++.+|+++++.++|++++..+.++....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~---~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLG---RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeecC---ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 344567889999999999998764 3444444322111 1123456889999999999999988877777777
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
..++||||+++++|.+++. ....++.|++.+|.+||+.||+||||||+|||+ .++.++|+|||+|+..+
T Consensus 410 ~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~ 478 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD 478 (535)
T ss_pred CCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence 7899999999999998874 356789999999999999999999999999999 67899999999998765
Q ss_pred C
Q 042913 254 V 254 (317)
Q Consensus 254 ~ 254 (317)
.
T Consensus 479 ~ 479 (535)
T PRK09605 479 L 479 (535)
T ss_pred c
Confidence 4
No 417
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.85 E-value=6.9e-21 Score=159.25 Aligned_cols=134 Identities=21% Similarity=0.221 Sum_probs=106.9
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhh------cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcc
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
||+|+||.||++.+. +..+++|+...... ......++.+|+++++.+.|+++.....++......++||||
T Consensus 2 ig~G~~~~vy~~~~~---~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 2 IAKGAEAIIYLGDFL---GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCceEEEEEeecC---CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 899999999999743 67899998653211 112346678899999999987665444444556667899999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
++|++|.+++... .. .++.|++.+|.+||+.|++|+|++|.||+++ ++.++|+|||+++....
T Consensus 79 ~~g~~l~~~~~~~--~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 79 IEGKPLKDVIEEG--ND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDE 141 (199)
T ss_pred ECCccHHHHHhhc--HH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCc
Confidence 9999999887442 11 7789999999999999999999999999999 89999999999876443
No 418
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.82 E-value=1e-19 Score=150.56 Aligned_cols=139 Identities=21% Similarity=0.250 Sum_probs=101.0
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHH----------------------HHHHHHHHHhcCCC--
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSH----------------------VQMEAEILSMLDHP-- 160 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~----------------------~~~E~~~l~~l~h~-- 160 (317)
.+.||+|+||.||+|.+. +++.||||++............ ...|.+.+..+.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~--~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLALDG--DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CcccccccceeEEEEECC--CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 456999999999999865 5899999998754322111111 13566666666543
Q ss_pred CcceEEEEEEecCEEEEEEcccCCCChhc-ccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccC
Q 042913 161 FLPTLYAHLEVSHYICFLIDYCPNGDLHS-LLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLRED 238 (317)
Q Consensus 161 ~iv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~ 238 (317)
.+.+.++. ...++||||++++.+.. .+... .. ...++.++.+++.++.++|. .+|+|+||||+||+++ +
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhh---hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence 35556553 23589999998855432 12111 01 15678899999999999999 9999999999999999 8
Q ss_pred CcEEEeeecccccCCC
Q 042913 239 GHIMLSDFDLCFQSDV 254 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~ 254 (317)
+.++|+|||.|.....
T Consensus 151 ~~~~liDfg~a~~~~~ 166 (187)
T cd05119 151 GKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcEEEEECcccccccC
Confidence 9999999999976654
No 419
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.81 E-value=3e-20 Score=161.97 Aligned_cols=210 Identities=16% Similarity=0.132 Sum_probs=159.0
Q ss_pred hccCCCCccccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcce
Q 042913 89 TNLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPT 164 (317)
Q Consensus 89 ~~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 164 (317)
.....+-.+...++++...+-+|.||.||.|.+++. +.+.|.+|.++.. .++-+...+..|.-++..+.|||+..
T Consensus 273 ~~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~ 351 (563)
T KOG1024|consen 273 NRRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLS 351 (563)
T ss_pred hhhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccc
Confidence 333444556677888889999999999999987752 2345666766433 35566678888999999999999999
Q ss_pred EEEEEE-ecCEEEEEEcccCCCChhccccc------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc
Q 042913 165 LYAHLE-VSHYICFLIDYCPNGDLHSLLPK------QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE 237 (317)
Q Consensus 165 ~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~------~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~ 237 (317)
+.++.. +....++++.++.-|+|..++.. ...+.+...+...++.|++.|+.|||..||||.||-..|.+|++
T Consensus 352 V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 352 VLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD 431 (563)
T ss_pred eeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh
Confidence 999875 45667888999988999999862 22345777888999999999999999999999999999999999
Q ss_pred CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913 238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
.-++||+|=.+++.+-+..-.. .|.. +. ---.||++|-.+.+ ...-.+|.|+.|..++|+..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhc---LGDn-En----RPvkWMslEal~n~-----~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHC---LGDN-EN----RPVKWMSLEALQNS-----HYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred heeEEeccchhccccCcccccc---cCCC-CC----CcccccCHHHHhhh-----hhcchhhhHHHHHHHHHHHh
Confidence 9999999999998765533211 1110 00 01237888766543 33467899999999999864
No 420
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.79 E-value=1.1e-18 Score=149.73 Aligned_cols=136 Identities=24% Similarity=0.277 Sum_probs=103.8
Q ss_pred ec-ccCCeEEEEEEEcCCCCceEEEEEeehhhh-----------cHHHHHHHHHHHHHHHhcCCCCc--ceEEEEEEec-
Q 042913 108 LG-TGNLGRVFLCHLRDCTSANFALKVVDKDLL-----------SAKKLSHVQMEAEILSMLDHPFL--PTLYAHLEVS- 172 (317)
Q Consensus 108 lg-~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i--v~~~~~~~~~- 172 (317)
|| .|+.|.||.+... +..++||.+..... ......++.+|++++..|.|++| +..+++....
T Consensus 39 lg~~~g~gtv~~v~~~---~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP---GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred eecCCCCccEEEEEeC---CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 66 7888888887654 57899998854211 11233567889999999998775 6777664432
Q ss_pred CE---EEEEEcccCC-CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecc
Q 042913 173 HY---ICFLIDYCPN-GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDL 248 (317)
Q Consensus 173 ~~---~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~ 248 (317)
.. .++|||+++| .+|.+++.. ..+++.. +.||+.+|.+||+.||+||||||.|||++.++.++|+|||.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 22 3599999987 689888754 3355443 57899999999999999999999999999989999999999
Q ss_pred cccCC
Q 042913 249 CFQSD 253 (317)
Q Consensus 249 a~~~~ 253 (317)
+....
T Consensus 189 ~~~~~ 193 (239)
T PRK01723 189 GELRT 193 (239)
T ss_pred cccCC
Confidence 87644
No 421
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.79 E-value=1.8e-20 Score=187.29 Aligned_cols=152 Identities=11% Similarity=0.082 Sum_probs=103.4
Q ss_pred cCC-CCcceEEEEE-------EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC
Q 042913 157 LDH-PFLPTLYAHL-------EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDL 228 (317)
Q Consensus 157 l~h-~~iv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDi 228 (317)
+.| .||+.+++.| .....++++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 344 4677777766 2334577889988 78999999643 456999999999999999999999999999999
Q ss_pred CCCcEEEccCCcEEEeeecccccCCCCCCe--ee---------------------cccccc--cccccccccCCCCCccc
Q 042913 229 KPENILLREDGHIMLSDFDLCFQSDVVPTL--VE---------------------TNVGSA--TRRRRRKSCNGFGSAKR 283 (317)
Q Consensus 229 kp~Nill~~~~~~kl~DFG~a~~~~~~~~~--~~---------------------~~~~~~--~~~~~~~~~~~~~sp~~ 283 (317)
||+||||+..+.+|++|||++......... .. ...+.. .......++..|++||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999976666666666555432211000 00 000000 00111234455777776
Q ss_pred ccccccceeccchhhhccCCcccccccCCCCC
Q 042913 284 RQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.. ........|+|++|++++|+.+|.|
T Consensus 187 ~~-----~~~~~~~sDVwSlGviL~ELl~~~~ 213 (793)
T PLN00181 187 DN-----GSSSNCASDVYRLGVLLFELFCPVS 213 (793)
T ss_pred hc-----cCCCCchhhhhhHHHHHHHHhhCCC
Confidence 53 2334678999999999999999855
No 422
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.79 E-value=1.8e-18 Score=137.25 Aligned_cols=134 Identities=22% Similarity=0.290 Sum_probs=113.0
Q ss_pred EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEEEEEecCEEEEEEcc
Q 042913 104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
+++.||+|.++.||++.... ..+++|....... ...+.+|+.+++.+.+ .++++++.+....+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~---~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD---EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC---CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45679999999999998753 6899999866532 4568889999999976 5899999988888889999999
Q ss_pred cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc---CCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 182 CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL---GIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 182 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
++++.+..+ +......++.+++.+|.+||.. +++|+||+|.||++++.+.++|+|||.|+..+
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 988777654 4456677889999999999985 69999999999999998999999999987544
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1e-18 Score=171.11 Aligned_cols=147 Identities=25% Similarity=0.396 Sum_probs=115.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC---CCCcceEEEEEEec
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVS 172 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~ 172 (317)
.+....|.|.+.||+|+||+||+|...+ ++.||||+-+.....+ +..-.+++.+|+ -+-|..+...+...
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~--~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN--GKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC--CcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 3445789999999999999999998876 9999999976543322 122233334443 12334444444556
Q ss_pred CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------CCcEEEee
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-------DGHIMLSD 245 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-------~~~~kl~D 245 (317)
+.-++|+||.+.|+|.+++. ..+.+++..+..+..|++..+++||..+|||+||||+|+||.. ..-++|+|
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 66789999999999999995 5688999999999999999999999999999999999999942 33699999
Q ss_pred eccccc
Q 042913 246 FDLCFQ 251 (317)
Q Consensus 246 FG~a~~ 251 (317)
||.+..
T Consensus 845 fG~siD 850 (974)
T KOG1166|consen 845 FGRSID 850 (974)
T ss_pred ccccee
Confidence 999843
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=8.5e-19 Score=167.83 Aligned_cols=196 Identities=26% Similarity=0.273 Sum_probs=140.6
Q ss_pred EEeeeecccCCeEEEEEEEcCCCCceEEEEEee----hhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 103 KLVRHLGTGNLGRVFLCHLRDCTSANFALKVVD----KDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~----~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
.....+|.|++|.|+.+.... ..+.++.|.+. ......+....+..|..+-..+.|+|++..+..+.+....+.+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~-~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRS-DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecC-CCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 456779999999887776554 34445555443 2222223333366777778888999998777666655555556
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
||||++ +|..++... ..+....+..++.|++.|++|||..||.|||||++|++++.+|.+||+|||.+..+......
T Consensus 400 mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 999988 999999653 57888999999999999999999999999999999999999999999999998654432221
Q ss_pred eecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC
Q 042913 259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G 313 (317)
. -.......|+..|..+++.... -.++..|+|+.+..++.+..|
T Consensus 477 ~-----------~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~ 521 (601)
T KOG0590|consen 477 N-----------IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG 521 (601)
T ss_pred h-----------hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence 0 0112222344444444444433 337888999999999998887
No 425
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.70 E-value=1.3e-17 Score=144.42 Aligned_cols=203 Identities=20% Similarity=0.233 Sum_probs=125.8
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcC----------CCCcceEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLD----------HPFLPTLYAH 168 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~----------h~~iv~~~~~ 168 (317)
..+...+.||.|+++.||.+.+.. +++.+|+|++...... ....+.+++|.-....+. |-.++..++.
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~-t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVE-TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred eEEEEccccccCCceEEEEEEEcc-CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 467888999999999999999998 8999999998654322 244556666554433321 1122222222
Q ss_pred EE---------ec---C-----EEEEEEcccCCCChhccccc---CCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCeec
Q 042913 169 LE---------VS---H-----YICFLIDYCPNGDLHSLLPK---QPNN--RFSLQAVRFFAAEVLVGLEYLHALGIIYR 226 (317)
Q Consensus 169 ~~---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivHr 226 (317)
.. .. . +.+++|+-+ .++|.+++.. .... .+.......+..|+++.+++||..|++|+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 21 11 1 246788888 7788777542 1111 12233344556899999999999999999
Q ss_pred cCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCccccccccc---ceeccchhhhccCC
Q 042913 227 DLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM---EFVAEPRREQREHP 303 (317)
Q Consensus 227 Dikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~---~~~~~~~~~~~~~~ 303 (317)
||||+|++++.+|.++|+||+.....+.... . .....+|..||....... ........-|.|.+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----------~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----------C--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----------G--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee-----------c--cCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 9999999999999999999998765443111 0 123355666665543211 33445667789999
Q ss_pred cccccccCCC-CCCC
Q 042913 304 AQYSVEQPGG-VPRG 317 (317)
Q Consensus 304 ~~~~~e~~~G-~p~~ 317 (317)
|.+++.+-|| +|-|
T Consensus 237 G~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 237 GITLYSLWCGRLPFG 251 (288)
T ss_dssp HHHHHHHHHSS-STC
T ss_pred HHHHHHHHHccCCCC
Confidence 9999999998 7754
No 426
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.68 E-value=2.6e-16 Score=146.25 Aligned_cols=141 Identities=20% Similarity=0.271 Sum_probs=98.3
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----------------------------H----HHH------HH
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----------------------------K----KLS------HV 147 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----------------------------~----~~~------~~ 147 (317)
+.||.|++|+||+|..++ |+.||||+.+...... . ... .+
T Consensus 123 ~plasaSigQVh~A~l~~--G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVD--GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred cceeeeehhheEEEEecC--CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 569999999999999874 8999999986542110 0 000 13
Q ss_pred HHHHHHHHhc----C-CCC--cceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 042913 148 QMEAEILSML----D-HPF--LPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLV-GLEYLH 219 (317)
Q Consensus 148 ~~E~~~l~~l----~-h~~--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~-al~~LH 219 (317)
.+|...+.++ + +++ |++++. ......++||||++|++|.++...... ... ...++.+++. .+..+|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHH
Confidence 4455555554 2 233 233332 223456999999999999887643211 122 2345555555 478899
Q ss_pred HcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 220 ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 220 ~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
..|++|+|+||.||+++.++.++|+|||++..++.
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 99999999999999999999999999999988764
No 427
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.64 E-value=1.5e-17 Score=153.45 Aligned_cols=185 Identities=30% Similarity=0.451 Sum_probs=147.9
Q ss_pred ecccCCeEEEEEEEc--CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEcccCC
Q 042913 108 LGTGNLGRVFLCHLR--DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLIDYCPN 184 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 184 (317)
+|+|.||.|+++.-. ...+.-+|+|+..+.............|..++..++ ||.++++...++.+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 799999999987432 124678899988766444333336677888999888 99999999999999999999999999
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
|.|...+.+ ...+.+.....+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~------ 153 (612)
T KOG0603|consen 82 GDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------ 153 (612)
T ss_pred chhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc------
Confidence 999998855 466888888889999999999999999999999999999999999999999998765332211
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
.++.-||+||-. + .-....|-|+.+-.++|+..| +|
T Consensus 154 --------cgt~eymApEI~-----~--gh~~a~D~ws~gvl~felltg~~p 190 (612)
T KOG0603|consen 154 --------CGTYEYRAPEII-----N--GHLSAADWWSFGVLAFELLTGTLP 190 (612)
T ss_pred --------ccchhhhhhHhh-----h--ccCCcccchhhhhhHHHHhhCCCC
Confidence 334456666544 3 223566789999999999999 55
No 428
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.64 E-value=1.2e-16 Score=150.29 Aligned_cols=147 Identities=16% Similarity=0.232 Sum_probs=96.1
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH--------------------------------HHHHH-
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA--------------------------------KKLSH- 146 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~~~~~- 146 (317)
.+|.. +.||.|++|+||+|..++ +|+.||||+.+...... +..+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~-~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKD-NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECC-CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 45666 789999999999999886 69999999997542100 11122
Q ss_pred -----HHHHHHHHHhc----CCCCcceEEEEE-EecCEEEEEEcccCCCChhcccccCCCC----CCCHHHHHHHHHHHH
Q 042913 147 -----VQMEAEILSML----DHPFLPTLYAHL-EVSHYICFLIDYCPNGDLHSLLPKQPNN----RFSLQAVRFFAAEVL 212 (317)
Q Consensus 147 -----~~~E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~i~~qi~ 212 (317)
+.+|...+.++ .+...+.+-.++ +.....+|||||++|+.|.++..-...+ .+.+..+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 23344333333 233333332222 2245678999999999998753211111 13333333344443
Q ss_pred HHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeecccccCCCC
Q 042913 213 VGLEYLHALGIIYRDLKPENILLREDG----HIMLSDFDLCFQSDVV 255 (317)
Q Consensus 213 ~al~~LH~~~ivHrDikp~Nill~~~~----~~kl~DFG~a~~~~~~ 255 (317)
...|++|+|+||.||+++.+| .++++|||++..++..
T Consensus 277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 468999999999999999888 9999999999877553
No 429
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.62 E-value=5.3e-15 Score=121.86 Aligned_cols=141 Identities=15% Similarity=0.179 Sum_probs=101.8
Q ss_pred eeecccCCeEEEEEEEcCC-----CCceEEEEEeehhhh--------------------cHHHHHH----HHHHHHHHHh
Q 042913 106 RHLGTGNLGRVFLCHLRDC-----TSANFALKVVDKDLL--------------------SAKKLSH----VQMEAEILSM 156 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~-----~~~~vavK~~~~~~~--------------------~~~~~~~----~~~E~~~l~~ 156 (317)
..||.|--+.||.|...+. .+..+|||+.+.... ....... .++|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4589999999999975531 247899999764210 0001122 2379999998
Q ss_pred cC--CCCcceEEEEEEecCEEEEEEcccCCCChhc-ccccCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCeeccCCCCc
Q 042913 157 LD--HPFLPTLYAHLEVSHYICFLIDYCPNGDLHS-LLPKQPNNRFSLQAVRFFAAEVLVGLEYL-HALGIIYRDLKPEN 232 (317)
Q Consensus 157 l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~L-H~~~ivHrDikp~N 232 (317)
+. .-++++++++ ..-+|||||+.+..+.. .+++ ..++......++.+++.+|..| |..||||+||++.|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 86 3577788865 34589999996543321 2221 2345566777889999999999 89999999999999
Q ss_pred EEEccCCcEEEeeecccccCCC
Q 042913 233 ILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 233 ill~~~~~~kl~DFG~a~~~~~ 254 (317)
||++ ++.++|+|||.|...+.
T Consensus 156 IL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred EEEE-CCcEEEEECCCceeCCC
Confidence 9997 57899999999876654
No 430
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.60 E-value=6.6e-15 Score=119.63 Aligned_cols=130 Identities=19% Similarity=0.235 Sum_probs=97.2
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEEEEEcccC
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
++.|+.|.++.||++... ++.|++|+...... ....+.+|+.+++.+.+.+ +++++.... ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~---~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA---NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC---CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 356899999999998754 57899999765421 1234577889998886544 446665543 23479999999
Q ss_pred CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-----eeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 184 NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGI-----IYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 184 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i-----vHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
|.++.+.. . ....++.+++.+|..||..++ +|+|++|.||+++ ++.++|+|||.|...+
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~ 138 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND 138 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC
Confidence 98876531 1 112356789999999999885 9999999999999 6789999999987543
No 431
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.59 E-value=1e-15 Score=134.34 Aligned_cols=209 Identities=18% Similarity=0.211 Sum_probs=133.3
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCC------C----------------------------CceEEEEEeehhh---
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC------T----------------------------SANFALKVVDKDL--- 138 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~------~----------------------------~~~vavK~~~~~~--- 138 (317)
.+..++|+|++.||+|.-..||.+..... + .-+.|||.+..-.
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 45668999999999999999999876530 0 0024555442211
Q ss_pred hcHHHHHHHHHHHHH--------------HHh--------cCCCCcceEEEEEEe-------------------------
Q 042913 139 LSAKKLSHVQMEAEI--------------LSM--------LDHPFLPTLYAHLEV------------------------- 171 (317)
Q Consensus 139 ~~~~~~~~~~~E~~~--------------l~~--------l~h~~iv~~~~~~~~------------------------- 171 (317)
.....++...+|..- .+. -+|||||+++++|.+
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 111222222222210 011 159999999877632
Q ss_pred --cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc--cCC--cEEEee
Q 042913 172 --SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR--EDG--HIMLSD 245 (317)
Q Consensus 172 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~--~~~--~~kl~D 245 (317)
...+|+||..+ ..+|.+++.. ...+......++.|+++|+.|||++||.|||+|.+||||. +|+ .+.|+|
T Consensus 313 g~~~tlylvMkrY-~~tLr~yl~~---~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 313 GEPKTLYLVMKRY-RQTLREYLWT---RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred CCCceEEEehhcc-hhhHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 34679999988 7799999854 3456777888999999999999999999999999999995 333 588999
Q ss_pred ecccccCCCCCCeeecccccccccccccccCCCCCcccccc-cccceeccchhhhccCCcccccccCC
Q 042913 246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQE-NVMEFVAEPRREQREHPAQYSVEQPG 312 (317)
Q Consensus 246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~ 312 (317)
||+|---+... -......+..-..|..-.|+||-... .-+.-+-.--++|.|.-+...+|...
T Consensus 389 FGCcLAd~~hG----lqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg 452 (598)
T KOG4158|consen 389 FGCCLADDNHG----LQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFG 452 (598)
T ss_pred cceeeeccccc----cccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhc
Confidence 99984322210 01111122223345555788885321 11112222346778988888888754
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.58 E-value=1.9e-16 Score=153.64 Aligned_cols=204 Identities=19% Similarity=0.179 Sum_probs=145.1
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh--hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
+|...+.||.+.|=+|.+|++++ |. |+||++.+.. ..-....+...|++ ...+++||++.+.-+.+.+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e--G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE--GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC--ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHH
Confidence 67888999999999999998886 44 9999987653 22344444555666 6677899999998887788888999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc--CCCCC
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ--SDVVP 256 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~--~~~~~ 256 (317)
-+|. .-+|+|.+..+ .-+..-+.+-|+.||+.||..+|..||+|+|||.+||||+.-+.+.|+||.-=|. +..+.
T Consensus 100 Rqyv-khnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 100 RQYV-KHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHHH-hhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9999 77999999664 3356677788899999999999999999999999999999999999999975432 11111
Q ss_pred CeeecccccccccccccccCCCCCcccccccc---cceec---cchhhhccCCcccccccCC-CCCC
Q 042913 257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENV---MEFVA---EPRREQREHPAQYSVEQPG-GVPR 316 (317)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~---~~~~~---~~~~~~~~~~~~~~~e~~~-G~p~ 316 (317)
...-+.- .-..++..| |.+||+--... ..... -....|+-++||.+.|+.+ |.|+
T Consensus 177 Padf~fF---FDTSrRRtC--YiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~Pl 238 (1431)
T KOG1240|consen 177 PADFTFF---FDTSRRRTC--YIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPL 238 (1431)
T ss_pred cccceEE---EecCCceee--ecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCc
Confidence 1110000 011112222 55666543311 11111 2367789999999999754 5764
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.52 E-value=2.9e-15 Score=145.28 Aligned_cols=175 Identities=26% Similarity=0.403 Sum_probs=121.4
Q ss_pred cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
-.+|..++.|..|+||.||.++++. +.+.+|+|+ +++.+. +++ ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~-trqrfa~ki-Nkq~li------lRn---ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKE-TRQRFAMKI-NKQNLI------LRN---ILTFAGNPFVV--------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccc-cccchhhcc-cccchh------hhc---cccccCCccee---------------
Confidence 3678899999999999999998887 788999954 332110 111 23333333333
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
|+=..+++.. +.++.. ++.+++|||..||+|||+||+|++|+.-|++|+.|||+.+..-...+.
T Consensus 136 ------gDc~tllk~~--g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ------GDCATLLKNI--GPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ------chhhhhcccC--CCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 2323333221 334433 278999999999999999999999999999999999999776443322
Q ss_pred eeccccccc-ccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CCC
Q 042913 259 VETNVGSAT-RRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VPR 316 (317)
Q Consensus 259 ~~~~~~~~~-~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p~ 316 (317)
....|... ....-..-+.+++|+|+.++|.......+-.|-|+++.+++||.-| +|-
T Consensus 200 -nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpf 258 (1205)
T KOG0606|consen 200 -NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF 258 (1205)
T ss_pred -hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeec
Confidence 11122222 2222333445899999999988877777778889999999999988 663
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=2.9e-15 Score=143.66 Aligned_cols=202 Identities=20% Similarity=0.258 Sum_probs=152.3
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 179 (317)
.|.+.+.||+|+|+.|-.+.........+|+|.+...............|..+-+.+. |.|++.+++........++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4556666999999999988776545667777777655434455566777888888887 999999999999999999999
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCCCC
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH-ALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~~~ 257 (317)
++..|+++.+.+........+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|..+...
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~-- 178 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK-- 178 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc--
Confidence 9999999999884222225677778889999999999999 99999999999999999999 9999999999766542
Q ss_pred eeecccccccccccccc-cCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 258 LVETNVGSATRRRRRKS-CNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 258 ~~~~~~~~~~~~~~~~~-~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.|.......+.+ ..-|++||..... .-.....|.|+.+..+.=+..|
T Consensus 179 -----~g~~~~~~~~~g~s~~y~a~E~~~~~----~~~~~~~d~~S~g~~l~~~~~g 226 (601)
T KOG0590|consen 179 -----NGAERSLKDRCGSSPPYGAPEHLSGK----AYRGPSVDVWSLGIVLSAMLTG 226 (601)
T ss_pred -----CCcceeeecccCCCCCCCCcccccch----hhcCCCcccccccccccccccC
Confidence 111112222233 3445555544332 2335667789999988877777
No 435
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=3.7e-13 Score=107.65 Aligned_cols=135 Identities=21% Similarity=0.179 Sum_probs=98.4
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehh-h----hcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEc
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKD-L----LSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~-~----~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 180 (317)
.+++|+-+.+|.+.+. |..+++|.-.++ . ..+ -...+..+|..++..++-..|..-+-+..+.....++||
T Consensus 3 ~i~~GAEa~i~~~~~~---g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFL---GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeecc---CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4789999999998665 455777754322 1 111 234567889999998875444433334445666789999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
|++|..|.+++... ...++..+-.-+.-||..||+|+||.++||++..+ ++.++|||++...+.
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~s~~ 143 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEFSDE 143 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCccccccc
Confidence 99988898888543 13456667777889999999999999999999764 499999999976544
No 436
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.48 E-value=2.1e-14 Score=117.38 Aligned_cols=100 Identities=17% Similarity=0.069 Sum_probs=82.4
Q ss_pred CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccc
Q 042913 185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVG 264 (317)
Q Consensus 185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 264 (317)
|+|.+++... +..+++..++.++.||+.||.|||+.+ ||+|||++.++.+|+ ||+++.......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~------- 64 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS------- 64 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC-------
Confidence 6888888653 456999999999999999999999998 999999999999999 999876543211
Q ss_pred cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 265 SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
.++..|++||..... ....++|+|++|++++|+..|
T Consensus 65 --------~g~~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg 100 (176)
T smart00750 65 --------RVDPYFMAPEVIQGQ-----SYTEKADIYSLGITLYEALDY 100 (176)
T ss_pred --------CCcccccChHHhcCC-----CCcchhhHHHHHHHHHHHHhC
Confidence 355678888877543 234679999999999999998
No 437
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.47 E-value=6.1e-13 Score=106.00 Aligned_cols=146 Identities=20% Similarity=0.162 Sum_probs=105.4
Q ss_pred EeeeecccCCeEEEEEEEcCCCCceEEEEEee-hhh----hc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913 104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVD-KDL----LS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF 177 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~-~~~----~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 177 (317)
.+..|-+|+-+.|+++.+. |+..+||.-. +.. .+ .-...+..+|+++|.++.--.|.--.-++.+...-++
T Consensus 11 ~l~likQGAEArv~~~~~~---Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS---GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC---CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeE
Confidence 4566889999999999766 5777777532 221 11 2334677889999998874444333333445555678
Q ss_pred EEcccCC-CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeecccccC
Q 042913 178 LIDYCPN-GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIMLSDFDLCFQS 252 (317)
Q Consensus 178 v~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl~DFG~a~~~ 252 (317)
+|||++| .++.+++...............++.+|-..|.-||..+|+|+||..+||++..++ .+.|+|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999965 3788887665444444444578889999999999999999999999999997655 4689999997543
No 438
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.47 E-value=3.7e-15 Score=124.87 Aligned_cols=197 Identities=19% Similarity=0.279 Sum_probs=154.0
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 176 (317)
+...++.+..+|.+...|..|+|++.. ..++.|++.........-+.|..|.-.|+.+.||||+.+++.|....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqg---ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQG---NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccC---cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 444566777789999999999999885 56778988877666667778999999999999999999999999999999
Q ss_pred EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-Ce-eccCCCCcEEEccCCcEEEe--eecccccC
Q 042913 177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-II-YRDLKPENILLREDGHIMLS--DFDLCFQS 252 (317)
Q Consensus 177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-iv-HrDikp~Nill~~~~~~kl~--DFG~a~~~ 252 (317)
++..||+.|+|+.++.+..+...+..++.+++.+|++|+.|||+.. ++ ---|....++||++...+|. |--++.+-
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 9999999999999998877777788999999999999999999975 33 34588899999998876653 43333221
Q ss_pred CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913 253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP 315 (317)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p 315 (317)
..+.....||+||..+.--... .-+.+|+||-...++|+-+- +|
T Consensus 344 -----------------~gr~y~pawmspealqrkped~--n~raadmwsfaillwel~trevp 388 (448)
T KOG0195|consen 344 -----------------VGRAYSPAWMSPEALQRKPEDL--NIRAADMWSFAILLWELNTREVP 388 (448)
T ss_pred -----------------cccccCcccCCHHHHhcCchhc--chhhhhHHHHHHHHHHhhccccc
Confidence 1123345688888765322221 24778999999988888655 44
No 439
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.46 E-value=7.7e-13 Score=112.08 Aligned_cols=142 Identities=20% Similarity=0.240 Sum_probs=107.9
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEEEEEec---CEEEEEEc
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYAHLEVS---HYICFLID 180 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~---~~~~lv~e 180 (317)
+.|+.|..+.||++...+ |+.+++|+....... .....+.+|.++++.+.+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~--g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG--GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC--CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999997653 678999998654221 134567889999999975 4567788776653 36789999
Q ss_pred ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 042913 181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA---------------------------------------- 220 (317)
Q Consensus 181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~---------------------------------------- 220 (317)
|++|.++.+.+.. ..++......++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988876631 346666777777778888777773
Q ss_pred ----------------cCCeeccCCCCcEEEcc--CCcEEEeeecccccCC
Q 042913 221 ----------------LGIIYRDLKPENILLRE--DGHIMLSDFDLCFQSD 253 (317)
Q Consensus 221 ----------------~~ivHrDikp~Nill~~--~~~~kl~DFG~a~~~~ 253 (317)
..++|+|++|.||+++. ++.+.|+||+.+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence 23689999999999998 6678999999986543
No 440
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.41 E-value=7.7e-12 Score=108.64 Aligned_cols=136 Identities=17% Similarity=0.056 Sum_probs=97.0
Q ss_pred CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHH----------HHHHHHHHHHhcCC--CCcceEEEEEEe-----cCE
Q 042913 112 NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLS----------HVQMEAEILSMLDH--PFLPTLYAHLEV-----SHY 174 (317)
Q Consensus 112 ~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~----------~~~~E~~~l~~l~h--~~iv~~~~~~~~-----~~~ 174 (317)
....|+++... |+.|.||......... ..+ .+.+|...+..|.. -.++.++.+++. ...
T Consensus 34 ~~rrvvr~~~~---g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 34 EGRRTLRFELA---GKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred CCceEEEEEEC---CEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 33446666443 5788999764332111 111 36788888888753 334455555543 235
Q ss_pred EEEEEcccCCC-ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------CCcEEEeee
Q 042913 175 ICFLIDYCPNG-DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-------DGHIMLSDF 246 (317)
Q Consensus 175 ~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-------~~~~kl~DF 246 (317)
-++|+|++++. +|.+++........+......++.+++..+.-||+.||+|+|+++.|||++. +..+.|+||
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 78999999775 7888875432344566777889999999999999999999999999999975 468999999
Q ss_pred ccccc
Q 042913 247 DLCFQ 251 (317)
Q Consensus 247 G~a~~ 251 (317)
+.+..
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98854
No 441
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.37 E-value=5.7e-12 Score=103.50 Aligned_cols=129 Identities=21% Similarity=0.221 Sum_probs=84.4
Q ss_pred EEEEEEEcCCCCceEEEEEeehhh------------------------hcHHHHHHHHHHHHHHHhcCCC--CcceEEEE
Q 042913 115 RVFLCHLRDCTSANFALKVVDKDL------------------------LSAKKLSHVQMEAEILSMLDHP--FLPTLYAH 168 (317)
Q Consensus 115 ~Vy~~~~~~~~~~~vavK~~~~~~------------------------~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~ 168 (317)
.||.|...+ +..+|+|+.+... .........++|.+.|..+... ++++++++
T Consensus 1 ~Vy~~~~~~--~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~ 78 (188)
T PF01163_consen 1 DVYHAIDPD--GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY 78 (188)
T ss_dssp EEEEEEECT--TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE
T ss_pred CEEEEECCC--CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE
Confidence 388887764 7899999876421 0011234568899999999855 57788765
Q ss_pred EEecCEEEEEEcccC--CCChhcccccCCCCCCCHHHHHHHHHHHHHHHHH-HHHcCCeeccCCCCcEEEccCCcEEEee
Q 042913 169 LEVSHYICFLIDYCP--NGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEY-LHALGIIYRDLKPENILLREDGHIMLSD 245 (317)
Q Consensus 169 ~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~-LH~~~ivHrDikp~Nill~~~~~~kl~D 245 (317)
. ..++||||++ |..+..+.... +.......++.+++..+.. +|..||+|+||.+.|||++++ .+.|+|
T Consensus 79 ~----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 N----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp E----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--
T ss_pred e----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEe
Confidence 3 2379999997 54554443221 2234456677788885555 579999999999999999876 999999
Q ss_pred ecccccCCC
Q 042913 246 FDLCFQSDV 254 (317)
Q Consensus 246 FG~a~~~~~ 254 (317)
||.|.....
T Consensus 150 f~qav~~~~ 158 (188)
T PF01163_consen 150 FGQAVDSSH 158 (188)
T ss_dssp GTTEEETTS
T ss_pred cCcceecCC
Confidence 999876653
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.32 E-value=4.6e-12 Score=118.52 Aligned_cols=163 Identities=12% Similarity=0.149 Sum_probs=124.2
Q ss_pred CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHH
Q 042913 125 TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAV 204 (317)
Q Consensus 125 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~ 204 (317)
++.+|.|.+..... ........+-++-|+.++||||+++++.++.++.+|+|+|-+ ..|..++++ +....+
T Consensus 36 ~~~~vsVF~~~~~~--~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v 106 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSN--GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEV 106 (690)
T ss_pred cCCceEEEEEeCCC--chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHH
Confidence 67788888776552 244566778889999999999999999999999999999987 467777754 336667
Q ss_pred HHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCccc
Q 042913 205 RFFAAEVLVGLEYLH-ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKR 283 (317)
Q Consensus 205 ~~i~~qi~~al~~LH-~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 283 (317)
...+.||+.||.||| +.+++|++|.-.-|+|+..|..||++|.++........ .........+|-.|.-
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----------~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----------PAKSLYLIESFDDPEE 176 (690)
T ss_pred HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----------ccccchhhhcccChhh
Confidence 777899999999998 57899999999999999999999999999865443221 1111122334555554
Q ss_pred ccccccceeccchhhhccCCcccccccCCC
Q 042913 284 RQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
+.++- ...|.|-+++...|+..|
T Consensus 177 ~~~s~-------~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 177 IDPSE-------WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cCccc-------cchhhhhHHHHHHHHhCc
Confidence 43332 667889999999888888
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=2.3e-12 Score=119.11 Aligned_cols=203 Identities=19% Similarity=0.154 Sum_probs=149.5
Q ss_pred cccCCeEEeeeecc--cCCeEEEEEEE--cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEe
Q 042913 97 LHLRHLKLVRHLGT--GNLGRVFLCHL--RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEV 171 (317)
Q Consensus 97 ~~~~~y~i~~~lg~--G~~g~Vy~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 171 (317)
+....+.+.+.+|. |.+|.||.+.. .. ++..+|+|.-+...........-.+|+...+.++ |+|.++.+..++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~-s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSE-SPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCccc-CCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc
Confidence 44466778888999 99999999877 55 6788999986554433344344556777777776 9999999999999
Q ss_pred cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHH----HHHHHHHcCCeeccCCCCcEEEccC-CcEEEeee
Q 042913 172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLV----GLEYLHALGIIYRDLKPENILLRED-GHIMLSDF 246 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~----al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DF 246 (317)
.+..|+-+|++ +.+|..+.... ..-++...++.++.+... ||.++|..+++|-|+||+||++..+ ..++++||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 99999999999 78888887553 345788899999999999 9999999999999999999999998 89999999
Q ss_pred cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913 247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G 313 (317)
|+..++....-.....+ ..+ ..+...|...+..+.. ....+|+-+++-+.+|...|
T Consensus 268 ~~v~~i~~~~~~~~~~~-----~~r-----~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~ 323 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKV-----SKR-----PEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILG 323 (524)
T ss_pred ceeEEccCCccccceee-----eec-----CCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhh
Confidence 99988766542211111 111 1333444444444432 23455567777777666665
No 444
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.23 E-value=9.5e-11 Score=99.34 Aligned_cols=140 Identities=20% Similarity=0.194 Sum_probs=105.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh------------------c--HHHHHHHHHHHHHHHhcCCC-
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------------------S--AKKLSHVQMEAEILSMLDHP- 160 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------------------~--~~~~~~~~~E~~~l~~l~h~- 160 (317)
+.++.+||.|--+.||.|...+ |.++|||.-+.... + .-.....++|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~--g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPK--GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HhhccccccCccceEEEEECCC--CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3466789999999999998775 89999997543210 0 01233568899999999754
Q ss_pred -CcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 161 -FLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 161 -~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
.|++.+++ +.-.+|||+++|..|...-- .......++..|+.-+..+-..||||+|+.+-||+++++|
T Consensus 171 ~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 171 VKVPKPIAW----NRHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCCCcccc----ccceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCC
Confidence 77887764 45689999998877765541 2333445666677777777799999999999999999999
Q ss_pred cEEEeeecccccCCC
Q 042913 240 HIMLSDFDLCFQSDV 254 (317)
Q Consensus 240 ~~kl~DFG~a~~~~~ 254 (317)
.+.++||--+...+.
T Consensus 240 ~~~vIDwPQ~v~~~h 254 (304)
T COG0478 240 DIVVIDWPQAVPISH 254 (304)
T ss_pred CEEEEeCcccccCCC
Confidence 999999987765443
No 445
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.22 E-value=2.4e-12 Score=117.22 Aligned_cols=127 Identities=20% Similarity=0.285 Sum_probs=97.1
Q ss_pred CEEEEEEcccCCCChhcccccC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 173 HYICFLIDYCPNGDLHSLLPKQ-PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 173 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
.++|+.|++|...+|.+++... .....++...+.++.|+..+++| ++.+|+|+||.||++..+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 4689999999999999999643 34556788899999999999999 9999999999999999999999999999866
Q ss_pred CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC
Q 042913 252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (317)
..... +..-.........++.-||+||.+..+- .....|+.+++.++.|+.
T Consensus 406 ~~~~~----~~~~~~a~~t~~~gt~~YmsPEQi~g~~-----y~~kvdIyaLGlil~EL~ 456 (516)
T KOG1033|consen 406 QDKDE----TVAPAAASHTQQVGTLLYMSPEQIRGQQ-----YSEKVDIYALGLILAELL 456 (516)
T ss_pred cccCC----cccchhhhhhhcccccccCCHHHHhhhh-----hhhhcchhhHHHHHHHHH
Confidence 55544 1112223445567788899998765332 234566777777777653
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1e-11 Score=114.83 Aligned_cols=153 Identities=20% Similarity=0.204 Sum_probs=125.2
Q ss_pred cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913 97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 175 (317)
....+|..+..||.|.|+.|+.+..+..++..|++|.+............-..|+-+...+. |.+++.++..|......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 44578899999999999999998866457889999988766544433334455677776665 88999988888878888
Q ss_pred EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeeccccc
Q 042913 176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDFDLCFQ 251 (317)
Q Consensus 176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DFG~a~~ 251 (317)
|+-.|||+++++...+. -...+.+...+++..|++.++.++|+..++|+|+||+||++..+ +..++.|||++..
T Consensus 342 ~ip~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 89999999988776652 23557888899999999999999999999999999999999876 7899999999864
No 447
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.20 E-value=3.1e-10 Score=95.32 Aligned_cols=108 Identities=25% Similarity=0.218 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhcC--CCCcceEEEEEEec----CEEEEEEcccCCC-ChhcccccCCCCCCCHHHHHHHHHHHHHHHH
Q 042913 144 LSHVQMEAEILSMLD--HPFLPTLYAHLEVS----HYICFLIDYCPNG-DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLE 216 (317)
Q Consensus 144 ~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~ 216 (317)
..+..+|...+..|. .-.+++.+++.+.. ...++|+|++++. +|.+++... ...+......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHHH
Confidence 346778888887775 33456667666542 2458999999874 799998653 22566777889999999999
Q ss_pred HHHHcCCeeccCCCCcEEEccCC---cEEEeeecccccCC
Q 042913 217 YLHALGIIYRDLKPENILLREDG---HIMLSDFDLCFQSD 253 (317)
Q Consensus 217 ~LH~~~ivHrDikp~Nill~~~~---~~kl~DFG~a~~~~ 253 (317)
-||+.||+|+|+++.|||++.++ .+.|+||+-++...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999999877 89999999887543
No 448
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.14 E-value=2.7e-11 Score=111.94 Aligned_cols=148 Identities=18% Similarity=0.209 Sum_probs=113.0
Q ss_pred HHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-eeccCCCCc
Q 042913 154 LSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGI-IYRDLKPEN 232 (317)
Q Consensus 154 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i-vHrDikp~N 232 (317)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+... ...+++.....+.++|+.||.|||...| .|+.++..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35678999999999999999999999999999999999763 5678888888899999999999998765 999999999
Q ss_pred EEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCccccccccccee--ccchhhhccCCccccccc
Q 042913 233 ILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV--AEPRREQREHPAQYSVEQ 310 (317)
Q Consensus 233 ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~--~~~~~~~~~~~~~~~~e~ 310 (317)
.+++....+||.|||+.......... ........-.-|.+||-......... ....+.|+.+.+.++.|+
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~--------~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEP--------EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccc--------cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 99999999999999997655330000 11111123445778887766533332 345566777776666654
No 449
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.10 E-value=3.7e-09 Score=87.94 Aligned_cols=142 Identities=14% Similarity=0.172 Sum_probs=95.2
Q ss_pred ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH-HHH------HHHHHHHHHHhcC---CCCcceE
Q 042913 96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK-KLS------HVQMEAEILSMLD---HPFLPTL 165 (317)
Q Consensus 96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~------~~~~E~~~l~~l~---h~~iv~~ 165 (317)
.+..++|++.+.+.......|.+-... ++.+++|..+......+ ... ...+++..+..++ ......+
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei~---~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEID---GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEEC---CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 355678999999988888888776544 68999998865432211 111 1233444444432 2223332
Q ss_pred EEEE-----EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc
Q 042913 166 YAHL-----EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH 240 (317)
Q Consensus 166 ~~~~-----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~ 240 (317)
+.+. ......+|+|||++|..|.++.. +++ .+...|..+|.-||+.|++|+|+.|.|++++.+ .
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-c
Confidence 3222 22345679999999998887652 222 244567788999999999999999999999854 5
Q ss_pred EEEeeeccccc
Q 042913 241 IMLSDFDLCFQ 251 (317)
Q Consensus 241 ~kl~DFG~a~~ 251 (317)
++++||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999988654
No 450
>PRK09902 hypothetical protein; Provisional
Probab=99.08 E-value=3e-09 Score=88.15 Aligned_cols=141 Identities=9% Similarity=0.105 Sum_probs=101.4
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhh----hcHHHHHHHHHHHHHHHhcCC--CCcceEEEEEEe----cCEEEE
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDL----LSAKKLSHVQMEAEILSMLDH--PFLPTLYAHLEV----SHYICF 177 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~----~~~~~l 177 (317)
-|+||-+-|+...... ..+-+|.-.... ..+--...+.+|+..|+.|.. -.++++...... .-.-+|
T Consensus 26 ~~rgG~SgV~r~~~~g---~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNG---KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCC---cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEE
Confidence 3678999999876554 467778654211 002234568889999888853 235555522111 223689
Q ss_pred EEcccCC-CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--EEEeeeccccc
Q 042913 178 LIDYCPN-GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH--IMLSDFDLCFQ 251 (317)
Q Consensus 178 v~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~--~kl~DFG~a~~ 251 (317)
|+|-+.| .+|.+++....-.+.+......++.+|+..|.-||+.|+.|+|+.+.|||++.++. ++++||.-++.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 9998843 58888885543345677778889999999999999999999999999999986677 99999988754
No 451
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.04 E-value=8.4e-09 Score=86.76 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=98.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHH----------------------HHHHHHHHHHHhcC--CC
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKL----------------------SHVQMEAEILSMLD--HP 160 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~----------------------~~~~~E~~~l~~l~--h~ 160 (317)
...|..|.-..||+|... .+..+|+|+++.....-... .=...|...|+++. +-
T Consensus 53 ~g~istGKEA~Vy~a~~~--~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV 130 (268)
T COG1718 53 VGCISTGKEANVYLAETG--DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV 130 (268)
T ss_pred EeeecCCcceEEEeeccC--CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 346778888999999764 48899999987542211110 01245777777764 45
Q ss_pred CcceEEEEEEecCEEEEEEcccCCC-ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccC
Q 042913 161 FLPTLYAHLEVSHYICFLIDYCPNG-DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLRED 238 (317)
Q Consensus 161 ~iv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~ 238 (317)
.+++-+++.. ..|||||+... .-.-.|++ ..+....+..+..++++.+.-|-. .++||+||..=|||+. +
T Consensus 131 rvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 131 RVPEPIAFRN----NVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-D 202 (268)
T ss_pred CCCCceeecC----CeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-C
Confidence 5666676543 37999999432 11122222 223333677788899999998877 8999999999999999 8
Q ss_pred CcEEEeeecccccCCCCC
Q 042913 239 GHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 239 ~~~kl~DFG~a~~~~~~~ 256 (317)
+.+.|+|||-|...+.+.
T Consensus 203 ~~p~iID~~QaV~~~hp~ 220 (268)
T COG1718 203 GEPYIIDVSQAVTIDHPN 220 (268)
T ss_pred CeEEEEECccccccCCCc
Confidence 899999999997776433
No 452
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.99 E-value=2.8e-09 Score=100.26 Aligned_cols=142 Identities=19% Similarity=0.267 Sum_probs=94.8
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH--------------------------------HHHH------HH
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA--------------------------------KKLS------HV 147 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~~~~------~~ 147 (317)
+.|+.++-|+||+|.++. |+.||||+.+...... +..+ .+
T Consensus 131 ~PiAsASIaQVH~A~L~s--G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 131 EPIASASIAQVHRAVLKS--GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred CchhhhhHhhheeEEecC--CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 458999999999999996 9999999987641110 0011 12
Q ss_pred HHHHHHHHhcC-----CCCc--ceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 042913 148 QMEAEILSMLD-----HPFL--PTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA 220 (317)
Q Consensus 148 ~~E~~~l~~l~-----h~~i--v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~ 220 (317)
.+|...+.+++ .++| ++++ ++..+...|+|||++|..+.++..... ..++...+...+.++ -+..+-.
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~--we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~~ 283 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVY--WEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceee--hhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHHh
Confidence 34444444442 3332 3333 334566789999999999988853332 445543333322222 1344455
Q ss_pred cCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 221 LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 221 ~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.|++|.|..|.||+++.+|.+.+.|||+...+++
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 8999999999999999999999999999877665
No 453
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.91 E-value=3.1e-08 Score=84.34 Aligned_cols=139 Identities=9% Similarity=0.136 Sum_probs=87.2
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEEEEecCEEEEEEcccC
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
..||+|..+.||+. .+..+++|...... ....+.+|.++++.+..- .+++.+++....+...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~-----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH-----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe-----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 46899999999984 24568899886532 223468899999888643 35788888888888899999998
Q ss_pred CCC-hhccccc---------------------CCCCCCCHHHH-HHHHH----------HHHHH-HHHHHH----cCCee
Q 042913 184 NGD-LHSLLPK---------------------QPNNRFSLQAV-RFFAA----------EVLVG-LEYLHA----LGIIY 225 (317)
Q Consensus 184 ~gs-L~~~l~~---------------------~~~~~~~~~~~-~~i~~----------qi~~a-l~~LH~----~~ivH 225 (317)
|.+ +...+.. .+......... ..+.. .+... ..+|.. ..++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 863 2211110 00001111110 01100 01111 222221 24789
Q ss_pred ccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 226 RDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 226 rDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
+|+.|.||++++++ +.|+||+.|...++
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGYGNP 185 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCcCCH
Confidence 99999999999888 99999999865443
No 454
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.90 E-value=9.7e-09 Score=93.99 Aligned_cols=141 Identities=15% Similarity=0.148 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE----ecCEEEEEEcccCC-CCh
Q 042913 113 LGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE----VSHYICFLIDYCPN-GDL 187 (317)
Q Consensus 113 ~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~lv~e~~~~-gsL 187 (317)
-.+.|+|...- +|..|++|.++... .......-.-+++++++.|.|||++.++|. .+..+++|++|+++ ++|
T Consensus 289 ~~Ttyk~~s~~-DG~~YvLkRlhg~r--~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNV-DGNAYVLKRLHGDR--DQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeecc-CCceeeeeeecccc--ccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 45688886665 89999999994431 111122334578899999999999988875 45568999999976 577
Q ss_pred hcccccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 188 HSLLPKQ-------------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 188 ~~~l~~~-------------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
.++.... .+.+.++..+|.++.|+..||.++|+.|+.-+-|.|.+||++.+.+++|..-|+.-.+..
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 7765332 234568899999999999999999999999999999999999888899987777655444
Q ss_pred CC
Q 042913 255 VP 256 (317)
Q Consensus 255 ~~ 256 (317)
++
T Consensus 446 d~ 447 (655)
T KOG3741|consen 446 DP 447 (655)
T ss_pred CC
Confidence 33
No 455
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.81 E-value=3.4e-08 Score=92.73 Aligned_cols=142 Identities=21% Similarity=0.258 Sum_probs=91.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-----------------------------HHHHH------HHHH
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-----------------------------KKLSH------VQME 150 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~~------~~~E 150 (317)
+.||..+.|+||+|+.+. |+.||||+-+...... +..+. +.+|
T Consensus 167 ~piaaASlaQVhrA~L~~--G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN--GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred chhhhcchhheEEEEecC--CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 569999999999999996 9999999976542110 00111 2223
Q ss_pred HHH----HHhcCCCC------cceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 042913 151 AEI----LSMLDHPF------LPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA 220 (317)
Q Consensus 151 ~~~----l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~ 220 (317)
.+. .+.+.|-+ |+++|- .......|+|||++|..+.|+-.-. ...++...+...+.++. +.-|-.
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~-~~gi~~~~i~~~l~~~~--~~qIf~ 319 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAID-KRGISPHDILNKLVEAY--LEQIFK 319 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHH-HcCCCHHHHHHHHHHHH--HHHHHh
Confidence 332 23334444 455543 2344678999999999887764322 23455554433333321 233345
Q ss_pred cCCeeccCCCCcEEEcc----CCcEEEeeecccccCCC
Q 042913 221 LGIIYRDLKPENILLRE----DGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 221 ~~ivHrDikp~Nill~~----~~~~kl~DFG~a~~~~~ 254 (317)
.|++|+|-.|.||++.. ++.+.+.|||+...+..
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 78999999999999983 66899999999876654
No 456
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=5.9e-08 Score=77.45 Aligned_cols=131 Identities=27% Similarity=0.319 Sum_probs=97.2
Q ss_pred CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecCEEEEEE
Q 042913 101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSHYICFLI 179 (317)
Q Consensus 101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 179 (317)
..++.+.|++|.+|.||+|.+.. ..+|+|+-+.+ .....+..|.++|..++..++ .++|.+.++ ++.|
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~~~---~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~m 91 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEWRG---GEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRM 91 (201)
T ss_pred hhhhhhhhhcccccEEEEeeccC---ceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhh
Confidence 34567789999999999998874 68999987654 334668889999999986665 466665443 4569
Q ss_pred cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCC-CCcEEEccCCcEEEeeeccccc
Q 042913 180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLK-PENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDik-p~Nill~~~~~~kl~DFG~a~~ 251 (317)
||+.|..|.+..... ...+ +..++..---|-..||-|..|. |..++|..++.+.|+||.-|..
T Consensus 92 e~i~G~~L~~~~~~~-----~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 92 EYIDGRPLGKLEIGG-----DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhcCcchhhhhhcc-----cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 999888887766321 2222 3445566556677899999997 7777777777999999999873
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.73 E-value=2.2e-07 Score=79.08 Aligned_cols=141 Identities=27% Similarity=0.361 Sum_probs=84.2
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEEE---EecCEEEEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAHL---EVSHYICFLI 179 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~~---~~~~~~~lv~ 179 (317)
++.|+.|..+.||++...+ +.+++|+.... .....+.+|..+++.+... .+++++... ......+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~---~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD---GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT---SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC---cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 4678999999999997664 58999997543 3446677888888887533 356777644 2344579999
Q ss_pred cccCCCChhcc----------------cc---cC--CCCCCCHHH---------HHHH------------HHHHHH-HHH
Q 042913 180 DYCPNGDLHSL----------------LP---KQ--PNNRFSLQA---------VRFF------------AAEVLV-GLE 216 (317)
Q Consensus 180 e~~~~gsL~~~----------------l~---~~--~~~~~~~~~---------~~~i------------~~qi~~-al~ 216 (317)
++++|..+... +. .. ....+.... .... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 99998888771 10 01 111111110 0000 111222 233
Q ss_pred HHHH-------cCCeeccCCCCcEEEc-cCCcEEEeeecccccC
Q 042913 217 YLHA-------LGIIYRDLKPENILLR-EDGHIMLSDFDLCFQS 252 (317)
Q Consensus 217 ~LH~-------~~ivHrDikp~Nill~-~~~~~kl~DFG~a~~~ 252 (317)
.+++ ..++|+|+.|.|||++ .++.+.|+||+.+...
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~ 198 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG 198 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence 3332 3599999999999999 6677789999987543
No 458
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.71 E-value=1.8e-07 Score=80.63 Aligned_cols=139 Identities=17% Similarity=0.075 Sum_probs=86.5
Q ss_pred ecccCC-eEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEcccCCC
Q 042913 108 LGTGNL-GRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLIDYCPNG 185 (317)
Q Consensus 108 lg~G~~-g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g 185 (317)
|..|.. ..||++... +..+++|+..... ...+.+|+++++.+. +--+++++++....+..++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~~---~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDGK---NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcCC---CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 445555 788988543 3678889875432 235667888888875 445678888877767789999999988
Q ss_pred Chhcccc-------------------cCC--CCCCCHH--HHHHHHH--------------------HHHHHHHHHH---
Q 042913 186 DLHSLLP-------------------KQP--NNRFSLQ--AVRFFAA--------------------EVLVGLEYLH--- 219 (317)
Q Consensus 186 sL~~~l~-------------------~~~--~~~~~~~--~~~~i~~--------------------qi~~al~~LH--- 219 (317)
+|..... ..+ ...+... ....... .+...+..|-
T Consensus 78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (244)
T cd05150 78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR 157 (244)
T ss_pred cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence 7764421 000 0011100 0000000 0111122221
Q ss_pred ----HcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913 220 ----ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 220 ----~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~ 254 (317)
...++|+|+.|.|||+++++.+.|+||+.|...+.
T Consensus 158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp 196 (244)
T cd05150 158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADR 196 (244)
T ss_pred CCcCceEEECCCCCCccEEEeCCcEEEEEEccccccccH
Confidence 12489999999999999987789999999876554
No 459
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.70 E-value=1.5e-09 Score=106.34 Aligned_cols=213 Identities=18% Similarity=0.229 Sum_probs=148.5
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 178 (317)
..+.+.+.+-+|.++.++.+.-.. ++...+.|+..... ......+....+-.++-..++|-++...-.+......+|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~-sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAG-SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccc-cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 345566667888899888876554 55555555543221 1111223333344444444556666555445566778999
Q ss_pred EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
++|+.+++|...++.. ...+.+.++-....+..++++||...++|+|++|.|+|+..+|..++.|||........+..
T Consensus 883 ~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 9999999999988654 45666667777788999999999999999999999999999999999999966554433222
Q ss_pred eecc----cccc------------cccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 259 VETN----VGSA------------TRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 259 ~~~~----~~~~------------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
.... .++. ..+..+......++|.|..++.....+-...+|.|+.+..++|+.+|.|
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 2210 0110 1111133556788999999999999999999999999999999999965
No 460
>PLN02876 acyl-CoA dehydrogenase
Probab=98.58 E-value=1.1e-06 Score=88.53 Aligned_cols=152 Identities=18% Similarity=0.302 Sum_probs=94.0
Q ss_pred eeeecccCCeEEEEEEEcCCC-CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCc--ceEEEEEEec---CEEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCT-SANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFL--PTLYAHLEVS---HYICF 177 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i--v~~~~~~~~~---~~~~l 177 (317)
++.|+.|.+..+|+....... ...+++|+....... .....+.+|.++++.+. |.+| ++++.++.+. +..|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 567899999999998765411 146778876543211 12346788999999996 6654 7888877654 46789
Q ss_pred EEcccCCCChhccc-----------------------ccCCC---------CC--CCHHHHHHHHHH-------------
Q 042913 178 LIDYCPNGDLHSLL-----------------------PKQPN---------NR--FSLQAVRFFAAE------------- 210 (317)
Q Consensus 178 v~e~~~~gsL~~~l-----------------------~~~~~---------~~--~~~~~~~~i~~q------------- 210 (317)
||||++|..+.+.. +.... .+ ....++..+..+
T Consensus 122 VME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~ 201 (822)
T PLN02876 122 IMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRN 201 (822)
T ss_pred EEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCC
Confidence 99999876543210 00000 00 001122222111
Q ss_pred --HHHHHHHHHH-----------cCCeeccCCCCcEEEccC-C-cEEEeeecccccCCCCCC
Q 042913 211 --VLVGLEYLHA-----------LGIIYRDLKPENILLRED-G-HIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 211 --i~~al~~LH~-----------~~ivHrDikp~Nill~~~-~-~~kl~DFG~a~~~~~~~~ 257 (317)
+...+.+|.. ..+||+|+++.|||++.+ + .+-|+||++|...++...
T Consensus 202 ~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl~D 263 (822)
T PLN02876 202 PKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCD 263 (822)
T ss_pred hhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCChHHH
Confidence 2233556643 249999999999999853 3 367999999987666444
No 461
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.55 E-value=9.4e-07 Score=75.73 Aligned_cols=143 Identities=13% Similarity=0.090 Sum_probs=81.5
Q ss_pred eeecccCCe-EEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC---CcceEEEEEEec---CEEEEE
Q 042913 106 RHLGTGNLG-RVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP---FLPTLYAHLEVS---HYICFL 178 (317)
Q Consensus 106 ~~lg~G~~g-~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~---~~~~lv 178 (317)
+.|+.|+.. .||+. +..+++|+.+.. .....+.+|.++++.+... -++++++..... ...|++
T Consensus 3 ~~~~~gG~~n~vy~~------~~~~VlR~~~~~----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 3 EPVDSGGTDNATFRL------GDDMSVRLPSAA----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred eeccCCCcccceEEc------CCceEEEcCCcc----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence 457777776 48875 235778876542 1234688899999888632 455666544332 245889
Q ss_pred EcccCCCChhccccc------------------CCCCCCC---------------HH-HH----HHHH----HHHHHH-H
Q 042913 179 IDYCPNGDLHSLLPK------------------QPNNRFS---------------LQ-AV----RFFA----AEVLVG-L 215 (317)
Q Consensus 179 ~e~~~~gsL~~~l~~------------------~~~~~~~---------------~~-~~----~~i~----~qi~~a-l 215 (317)
|++++|.++.+.... ......+ +. .. ..+. .+.+.. +
T Consensus 73 ~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 152 (235)
T cd05155 73 YRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALW 152 (235)
T ss_pred EEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHH
Confidence 999998877543211 0000000 00 00 0000 011111 1
Q ss_pred HHH-H-----HcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 216 EYL-H-----ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 216 ~~L-H-----~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
+.+ + ..+++|+|+.+.|||++.++..-|+||+.|...+....+
T Consensus 153 ~~~~~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dl 201 (235)
T cd05155 153 EAALRAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDL 201 (235)
T ss_pred HHHhcccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHH
Confidence 111 1 234899999999999987665679999998766554433
No 462
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.54 E-value=2.1e-06 Score=71.20 Aligned_cols=131 Identities=18% Similarity=0.303 Sum_probs=92.0
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhh--------------hcHHHHHHHHHHHHHHHhcC------CCCcceEE
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--------------LSAKKLSHVQMEAEILSMLD------HPFLPTLY 166 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~E~~~l~~l~------h~~iv~~~ 166 (317)
.||+|+.-.||.- . .+...+||+..... ......++..+|+.-...+. +.+|.+++
T Consensus 8 ~i~~G~~R~cy~H--P--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 8 LIAQGGERDCYQH--P--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred ccccCCCceEEEC--C--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 4999999999963 2 34567899987654 11122455566666655554 78899999
Q ss_pred EEEEecCEEEEEEcccCC------CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-
Q 042913 167 AHLEVSHYICFLIDYCPN------GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG- 239 (317)
Q Consensus 167 ~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~- 239 (317)
|+.+++.-..+|+|.+.+ .+|.+++.+ +.++. . +...+-+-..||-+.+|+.+||+|.||++....
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 999999989999998642 257777743 33554 2 233344556788899999999999999996422
Q ss_pred ---cEEEee-ecc
Q 042913 240 ---HIMLSD-FDL 248 (317)
Q Consensus 240 ---~~kl~D-FG~ 248 (317)
.+.|+| ||-
T Consensus 157 ~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 157 GEFRLVLIDGLGE 169 (199)
T ss_pred CceEEEEEeCCCC
Confidence 578887 554
No 463
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.46 E-value=2.6e-06 Score=70.23 Aligned_cols=127 Identities=24% Similarity=0.346 Sum_probs=88.9
Q ss_pred CCeEEeeeecccCC-eEEEEEEEcCCCCceEEEEEeeh---hh-------hc---------HHHHHHHHHHHHHHHhcC-
Q 042913 100 RHLKLVRHLGTGNL-GRVFLCHLRDCTSANFALKVVDK---DL-------LS---------AKKLSHVQMEAEILSMLD- 158 (317)
Q Consensus 100 ~~y~i~~~lg~G~~-g~Vy~~~~~~~~~~~vavK~~~~---~~-------~~---------~~~~~~~~~E~~~l~~l~- 158 (317)
.+++.++.||.|.- |.||+++.. |+.+|||++.. .. .. ......|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~---g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID---GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC---CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 68899999999999 999999877 57999999322 00 00 022345778888877765
Q ss_pred --CCCc--ceEEEEEEecC------------------EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHH
Q 042913 159 --HPFL--PTLYAHLEVSH------------------YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLE 216 (317)
Q Consensus 159 --h~~i--v~~~~~~~~~~------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~ 216 (317)
+.++ |+++|++.-.. ...+|.||++... .+.. .-+.+|+.-|.
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~----~~~~~~~~dl~ 178 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQI----RDIPQMLRDLK 178 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccch----hHHHHHHHHHH
Confidence 4456 89999873220 1244555543221 1222 23567888899
Q ss_pred HHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 217 YLHALGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 217 ~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
.+|..||+-+|+++.|.. .-+|+|||.+
T Consensus 179 ~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999999987 4578999875
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=1.2e-07 Score=82.27 Aligned_cols=91 Identities=23% Similarity=0.397 Sum_probs=77.2
Q ss_pred HHhcCCCCcceEEEEEEec-----CEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC--Ce
Q 042913 154 LSMLDHPFLPTLYAHLEVS-----HYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALG--II 224 (317)
Q Consensus 154 l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~--iv 224 (317)
|-.+-|.|||++..++.+. ....++.||+..|+|..+|++. ....+......+|+.||+.||.|||+.. |+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 4455699999999887544 3478999999999999999763 3456788889999999999999999975 99
Q ss_pred eccCCCCcEEEccCCcEEEe
Q 042913 225 YRDLKPENILLREDGHIMLS 244 (317)
Q Consensus 225 HrDikp~Nill~~~~~~kl~ 244 (317)
|+++..+-|++..+|-+|+.
T Consensus 201 hgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred cCCcchhheeecCCceEEec
Confidence 99999999999998888875
No 465
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.34 E-value=2.5e-06 Score=70.31 Aligned_cols=102 Identities=23% Similarity=0.297 Sum_probs=79.6
Q ss_pred HHHHHHHHhcCC-CCcceEEEEEEecCEEEEEEcccCCCChhccccc-CCCCCCCHHHHHHHHHHHHHHHHHHHH---cC
Q 042913 148 QMEAEILSMLDH-PFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPK-QPNNRFSLQAVRFFAAEVLVGLEYLHA---LG 222 (317)
Q Consensus 148 ~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ 222 (317)
.+|.-+++.+++ +++++++|+|-. ++|.||...+++...... ..--..+|..+.+|+.++++.+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 458888899986 699999999843 678899976766432100 011235899999999999999999987 34
Q ss_pred CeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 223 IIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 223 ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
+.-.|++|+|+-++++|++|++|...+...+
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 7779999999999999999999999875443
No 466
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.24 E-value=1.9e-05 Score=67.49 Aligned_cols=144 Identities=15% Similarity=0.260 Sum_probs=83.1
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC-CCcceEEEEEEecCEEEEEEcccC
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH-PFLPTLYAHLEVSHYICFLIDYCP 183 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~ 183 (317)
++.|..|-...+|++......++.|++|+..... .. .....+|..+++.+.. .-.++++..+. + .++|||++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~--~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~ 75 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT--EL-IIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIP 75 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc--cc-eecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeC
Confidence 3567778888999986442124688899775431 11 1233468888888853 33456665433 2 47999998
Q ss_pred CCChhcc-c------c----------cC--CC-------CCCC-HHHHHHHHH----------------------HHHHH
Q 042913 184 NGDLHSL-L------P----------KQ--PN-------NRFS-LQAVRFFAA----------------------EVLVG 214 (317)
Q Consensus 184 ~gsL~~~-l------~----------~~--~~-------~~~~-~~~~~~i~~----------------------qi~~a 214 (317)
|.++... + . .. .. .... +..+..+.. .+...
T Consensus 76 G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 155 (235)
T cd05157 76 GRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDE 155 (235)
T ss_pred CCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHH
Confidence 8776322 0 0 00 00 0111 112212211 11111
Q ss_pred HHHH----H----HcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCCC
Q 042913 215 LEYL----H----ALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVV 255 (317)
Q Consensus 215 l~~L----H----~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~ 255 (317)
+..| - ...++|+|+.+.|||++. ++.+.|+||..|...+..
T Consensus 156 ~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~ 205 (235)
T cd05157 156 ISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRA 205 (235)
T ss_pred HHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchh
Confidence 1222 1 135899999999999997 578999999998765443
No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.21 E-value=1.1e-05 Score=69.98 Aligned_cols=139 Identities=17% Similarity=0.175 Sum_probs=80.6
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEEEEEcccCCCC
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYICFLIDYCPNGD 186 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~~~gs 186 (317)
+..|-...+|+... .++.+++|+..... ....-...+|.++++.+.... .++++.... -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~~---~~~~~vlR~~~~~~--~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIEH---PGISFVWRPQSPVC--KALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEEe---CCccEEEeeCCccc--ccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 55677888998862 36688889764321 111013467888888886433 345555432 268999998877
Q ss_pred hhcc-----------------cccC--CCCCCCHH-HHHHHHHHH---------HHHHHHHHH--------cCCeeccCC
Q 042913 187 LHSL-----------------LPKQ--PNNRFSLQ-AVRFFAAEV---------LVGLEYLHA--------LGIIYRDLK 229 (317)
Q Consensus 187 L~~~-----------------l~~~--~~~~~~~~-~~~~i~~qi---------~~al~~LH~--------~~ivHrDik 229 (317)
+... ++.. ....+... .+..+..++ ...++.+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 6432 0111 01112211 111221111 111222221 148999999
Q ss_pred CCcEEEccCCcEEEeeecccccCCCCC
Q 042913 230 PENILLREDGHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 230 p~Nill~~~~~~kl~DFG~a~~~~~~~ 256 (317)
|.||+++.++ ++|+||+.|...++.-
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~gdp~~ 180 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASDGDIAL 180 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCcCCHHH
Confidence 9999999876 7899999987665533
No 468
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.20 E-value=3.6e-06 Score=73.68 Aligned_cols=138 Identities=16% Similarity=0.214 Sum_probs=98.9
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc------------------HHHH--HHHHHHHHHHHhcCC--
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS------------------AKKL--SHVQMEAEILSMLDH-- 159 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~------------------~~~~--~~~~~E~~~l~~l~h-- 159 (317)
+.++.+||-|.-+.||.+.+.+ |.+.++|+-+....+ ...+ -...+|...|+.|..
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~--G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEE--GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhccccccccccceEEEecCC--CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 4567889999999999998775 889999974322100 0011 124567888888753
Q ss_pred CCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913 160 PFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG 239 (317)
Q Consensus 160 ~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~ 239 (317)
--|++.+++ +.-++|||++.|-.|..+-.-. . +..+...++.-|.-|-.+|+||+|..-=||++++++
T Consensus 172 fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~-----d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 172 FPVPKPIDH----NRHCVVMELVDGYPLRQVRHVE-----D---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDD 239 (465)
T ss_pred CCCCCcccc----cceeeHHHhhcccceeeeeecC-----C---hHHHHHHHHHHHHHHHHcCceecccchheeEEecCC
Confidence 235566654 4568999999998887765321 2 233455666777888999999999999999999999
Q ss_pred cEEEeeecccccCC
Q 042913 240 HIMLSDFDLCFQSD 253 (317)
Q Consensus 240 ~~kl~DFG~a~~~~ 253 (317)
.++++||--+....
T Consensus 240 ~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 240 KIVVIDFPQMVSTS 253 (465)
T ss_pred CEEEeechHhhccC
Confidence 99999998665443
No 469
>PRK10593 hypothetical protein; Provisional
Probab=98.13 E-value=9e-05 Score=65.80 Aligned_cols=78 Identities=17% Similarity=0.084 Sum_probs=56.1
Q ss_pred EEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC---CCcceEEEEEEe---cCEEE
Q 042913 103 KLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH---PFLPTLYAHLEV---SHYIC 176 (317)
Q Consensus 103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~---~~~~~ 176 (317)
.-.+.||.|..+.||+....+ ..+.+|+.+.. .....+..|.+.|+.|.. ..++++++++.. .+..+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~---~~~~~k~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~ 89 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQ---GNPMPLMARSF----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV 89 (297)
T ss_pred heeeecCCccceeEEEEEcCC---CCEEEEEeccc----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence 445679999999999986443 35677875321 112467889999988853 468899987754 36689
Q ss_pred EEEcccCCCCh
Q 042913 177 FLIDYCPNGDL 187 (317)
Q Consensus 177 lv~e~~~~gsL 187 (317)
+|||++++.++
T Consensus 90 LVmE~i~G~~~ 100 (297)
T PRK10593 90 LLLERLRGVSV 100 (297)
T ss_pred EEEeccCCEec
Confidence 99999988765
No 470
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.10 E-value=2e-06 Score=81.02 Aligned_cols=183 Identities=16% Similarity=0.154 Sum_probs=123.7
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEEEEEc
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYICFLID 180 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e 180 (317)
+.....+++++++++++.+... .+....+++... ....-++++|.+++||| .+..++-++.+.+.+++++
T Consensus 244 s~~fh~fvK~altknpKkRpta--eklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTA--EKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCCh--hhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence 4455568899999999876554 233335555332 34556899999999999 7777777788889999999
Q ss_pred ccCCC-ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913 181 YCPNG-DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV 259 (317)
Q Consensus 181 ~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 259 (317)
++.++ +........ ...+.+-+...+++.-.+++++||+..-+|+| ||+..+ +..++.||+.+..+....
T Consensus 315 i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--- 385 (829)
T KOG0576|consen 315 ICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--- 385 (829)
T ss_pred hhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc---
Confidence 99766 332222111 22344445566677778899999998888999 777765 789999999987775532
Q ss_pred ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913 260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP 315 (317)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p 315 (317)
......++..+++|+....+... ..-+.|+++.-.++++.|+|
T Consensus 386 --------~~~t~~~~~~~~~pev~~~~~~~-----~~p~~~~~~~~~~~~ap~~p 428 (829)
T KOG0576|consen 386 --------KPRTAIGTPEPLAPEVIQENTID-----GCPDSGSLAVSAIQMAPGLP 428 (829)
T ss_pred --------ccccCCCCCCCCCchhhcccccc-----cCCCccCCCcchhhcCCCCC
Confidence 12222455566777766555444 33456777766777777744
No 471
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.10 E-value=2.7e-05 Score=69.40 Aligned_cols=145 Identities=18% Similarity=0.251 Sum_probs=98.0
Q ss_pred EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh----------------------cH-HHHHH-HHHHHHHHHhcCC
Q 042913 104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL----------------------SA-KKLSH-VQMEAEILSMLDH 159 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~----------------------~~-~~~~~-~~~E~~~l~~l~h 159 (317)
|-..|..|--..||.|... +|..+|||+++-..+ .+ ...+. ...|++-|++|+.
T Consensus 148 inGCiSTGKEANVYHat~~--dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEE--DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred cccccccCccceeEeeecC--CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4456778889999998766 488899999754211 11 11111 2457777888765
Q ss_pred CCcceEEEEEEecCEEEEEEcccCCCCh--hcccccCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEc
Q 042913 160 PFLPTLYAHLEVSHYICFLIDYCPNGDL--HSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH-ALGIIYRDLKPENILLR 236 (317)
Q Consensus 160 ~~iv~~~~~~~~~~~~~lv~e~~~~gsL--~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivHrDikp~Nill~ 236 (317)
..|+.---+.. ..-.|||+|+ |++= .-.|+ ...++...+..+-.|++.-+.-|. .+++||.||.--|+|+.
T Consensus 226 aGIP~PePIlL--k~hVLVM~Fl-Grdgw~aPkLK---d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh 299 (520)
T KOG2270|consen 226 AGIPCPEPILL--KNHVLVMEFL-GRDGWAAPKLK---DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH 299 (520)
T ss_pred cCCCCCCceee--ecceEeeeec-cCCCCcCcccc---cccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE
Confidence 55432211111 2237999999 4332 22232 244677778888888888888775 57999999999999996
Q ss_pred cCCcEEEeeecccccCCCCCC
Q 042913 237 EDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 237 ~~~~~kl~DFG~a~~~~~~~~ 257 (317)
+|.++|+|.+-+...+.+..
T Consensus 300 -dG~lyiIDVSQSVE~DHP~a 319 (520)
T KOG2270|consen 300 -DGKLYIIDVSQSVEHDHPHA 319 (520)
T ss_pred -CCEEEEEEccccccCCChhH
Confidence 58999999999877776554
No 472
>PRK05231 homoserine kinase; Provisional
Probab=98.07 E-value=8.6e-05 Score=66.60 Aligned_cols=140 Identities=15% Similarity=0.228 Sum_probs=77.0
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEE------EEEecCEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYA------HLEVSHYIC 176 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~------~~~~~~~~~ 176 (317)
.+.|+.|....+|+..... ..+++|++.. .... .+..|..+++.|.. -.+++++. +....+..+
T Consensus 27 ~~~l~~G~~n~~y~v~t~~---g~~vLK~~~~--~~~~---~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~ 98 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTTQ---GEYVLTLFER--LTAE---DLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPA 98 (319)
T ss_pred cchhccccccceEEEEeCC---CcEEEEEecc--CChH---HhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEE
Confidence 4557777778999986543 4788998752 1222 33345555555531 22444442 123356789
Q ss_pred EEEcccCCCChhcc-----------cc---cC-CC--------CCCCH-HHH-H-----------HHHHH-HHHHHHHHH
Q 042913 177 FLIDYCPNGDLHSL-----------LP---KQ-PN--------NRFSL-QAV-R-----------FFAAE-VLVGLEYLH 219 (317)
Q Consensus 177 lv~e~~~~gsL~~~-----------l~---~~-~~--------~~~~~-~~~-~-----------~i~~q-i~~al~~LH 219 (317)
++++|++|..+... +. .. .. ..+.+ ... . ..+.+ +...+..+.
T Consensus 99 ~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (319)
T PRK05231 99 AIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLA 178 (319)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhh
Confidence 99999988754221 00 00 00 00111 000 0 01111 111122222
Q ss_pred -------HcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 220 -------ALGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 220 -------~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
..++||+|+.|.|||++.+...-|+||+.|...
T Consensus 179 ~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~ 218 (319)
T PRK05231 179 SAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACND 218 (319)
T ss_pred ccccccCCcccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence 237999999999999986655689999998543
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.04 E-value=0.00012 Score=64.85 Aligned_cols=140 Identities=18% Similarity=0.185 Sum_probs=84.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEE------EEecCEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAH------LEVSHYIC 176 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~------~~~~~~~~ 176 (317)
.+.|..|....+|+.... +..+++|+.... . ...+..|+++++.+.+. .+++++.. ...++..+
T Consensus 19 i~~i~~G~~n~~y~v~~~---~~~~vLr~~~~~--~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 19 FEGISAGIENTNYFVTTD---SGRYVLTLFEKV--S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred eecccCccccceEEEEeC---CCcEEEEEcCCC--C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 556777888899998644 357899987541 1 24466678887777532 34555432 23345678
Q ss_pred EEEcccCCCChhcc----c----------cc----CCC-----CCCCHHHH--H--------HHHHHHHHHHHHHHH---
Q 042913 177 FLIDYCPNGDLHSL----L----------PK----QPN-----NRFSLQAV--R--------FFAAEVLVGLEYLHA--- 220 (317)
Q Consensus 177 lv~e~~~~gsL~~~----l----------~~----~~~-----~~~~~~~~--~--------~i~~qi~~al~~LH~--- 220 (317)
+|++|++|..+... + +. ... ....+... . .....+..++.++..
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 99999988776431 0 00 000 00011000 0 011112334444443
Q ss_pred ----cCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 221 ----LGIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 221 ----~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
.+++|+|+.|.|||++.++.+.|+||+.|...
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g 206 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTD 206 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCCceEEEeehhhhcCc
Confidence 36999999999999998777899999998654
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.01 E-value=0.00012 Score=67.15 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=54.9
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-----cHHHHHHHHHHHHHHHhcC---CCCcceEEEEEEecCEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-----SAKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVSHYIC 176 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~ 176 (317)
.+.||.|.+..||++...+ .++.++||....... .+-..++...|.+.|+.+. ..++++++.+. ....+
T Consensus 31 ~~elggGn~N~VyrV~~~~-g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~ 107 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTE-GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAV 107 (401)
T ss_pred eeEcCCCceEEEEEEEeCC-CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCE
Confidence 4679999999999998764 225899998542110 0223456777888888763 35678888763 35578
Q ss_pred EEEcccCCCC
Q 042913 177 FLIDYCPNGD 186 (317)
Q Consensus 177 lv~e~~~~gs 186 (317)
+||||+++..
T Consensus 108 lVME~L~~~~ 117 (401)
T PRK09550 108 TVMEDLSDHK 117 (401)
T ss_pred EEEecCCCcc
Confidence 9999997643
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.98 E-value=0.00029 Score=62.91 Aligned_cols=145 Identities=17% Similarity=0.258 Sum_probs=84.2
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEE------EEecC
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAH------LEVSH 173 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~------~~~~~ 173 (317)
....+.++.|....+|++... +..+++|+.+... . ...+..|.+++..|... .+++++.. ....+
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t~---~~~~vLK~~~~~~-~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTTD---VGRYILTLYEKRV-K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred ceeccccCCccccceEEEEeC---CCcEEEEEecCCC-C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCC
Confidence 344566777877899988643 3468889875421 1 12345567777776422 24455432 12346
Q ss_pred EEEEEEcccCCCChhccc--------------ccC-CC------C--CC-CHHHH--H----------HHHHHHHHHHHH
Q 042913 174 YICFLIDYCPNGDLHSLL--------------PKQ-PN------N--RF-SLQAV--R----------FFAAEVLVGLEY 217 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l--------------~~~-~~------~--~~-~~~~~--~----------~i~~qi~~al~~ 217 (317)
..+++++|++|..+.... +.. .. . .. .+... . .....+...+++
T Consensus 97 ~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 176 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDY 176 (307)
T ss_pred eEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHH
Confidence 679999999886543210 000 00 0 00 00000 0 001123334555
Q ss_pred HHH-------cCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913 218 LHA-------LGIIYRDLKPENILLREDGHIMLSDFDLCFQSD 253 (317)
Q Consensus 218 LH~-------~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~ 253 (317)
+.. .+++|+|+.+.||+++.++.+.|+||+.|....
T Consensus 177 l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 177 LDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA 219 (307)
T ss_pred HHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence 542 579999999999999988877999999985443
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.95 E-value=8.7e-05 Score=66.02 Aligned_cols=144 Identities=19% Similarity=0.204 Sum_probs=84.8
Q ss_pred eeecccCCeEEEEEEEcC-----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEEEEE
Q 042913 106 RHLGTGNLGRVFLCHLRD-----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~ 179 (317)
+.|..|-...+|++.... ..++.+++|+..... .......+|.++++.+.... .++++..+.. .+|+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~ 76 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV---ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIE 76 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC---cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchh
Confidence 446667777899886542 125789999975432 22235577888888875332 4566665542 3689
Q ss_pred cccCCCChhcc-c----------------ccCCCC-------CCC--HHHHHH--------------------------H
Q 042913 180 DYCPNGDLHSL-L----------------PKQPNN-------RFS--LQAVRF--------------------------F 207 (317)
Q Consensus 180 e~~~~gsL~~~-l----------------~~~~~~-------~~~--~~~~~~--------------------------i 207 (317)
||++|..+... + +..... ..+ +..+.. +
T Consensus 77 e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (302)
T cd05156 77 EFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLF 156 (302)
T ss_pred heeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHH
Confidence 99988776431 1 000000 111 001111 1
Q ss_pred HHHHHHHHHHHHH---------cCCeeccCCCCcEEEccC----CcEEEeeecccccCCCCC
Q 042913 208 AAEVLVGLEYLHA---------LGIIYRDLKPENILLRED----GHIMLSDFDLCFQSDVVP 256 (317)
Q Consensus 208 ~~qi~~al~~LH~---------~~ivHrDikp~Nill~~~----~~~kl~DFG~a~~~~~~~ 256 (317)
..++...+.+|-. ..++|+|+.+.|||++.+ +.++|+||..|...+..-
T Consensus 157 ~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~ 218 (302)
T cd05156 157 LEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGF 218 (302)
T ss_pred HHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHH
Confidence 1122223334432 248999999999999975 889999999997655533
No 477
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.83 E-value=0.00028 Score=61.97 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=29.2
Q ss_pred CCeeccCCCCcEEEccCCc-EEEeeecccccCCCCCC
Q 042913 222 GIIYRDLKPENILLREDGH-IMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 222 ~ivHrDikp~Nill~~~~~-~kl~DFG~a~~~~~~~~ 257 (317)
.++|+|++|.|||++.++. .-|+||+.|...++...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~D 222 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARD 222 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHH
Confidence 3899999999999997555 56999999987665443
No 478
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.70 E-value=0.00052 Score=61.01 Aligned_cols=153 Identities=13% Similarity=0.171 Sum_probs=87.4
Q ss_pred eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEEEEEecC--EEEE
Q 042913 102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYAHLEVSH--YICF 177 (317)
Q Consensus 102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~--~~~l 177 (317)
..+++.+..|.--.+|..... ++.++++ ...............+|..+++.+.- .-+...++.+..+. ..|.
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~---~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~ 102 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT---GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFY 102 (321)
T ss_pred CceeeeccCCcccceEEEecC---CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceE
Confidence 344455533433344544322 6778888 43222233555677888888888753 23445566665544 6799
Q ss_pred EEcccCCCChhcccccCCCC------------------------------CCCHHHHHHHHH--------------HHHH
Q 042913 178 LIDYCPNGDLHSLLPKQPNN------------------------------RFSLQAVRFFAA--------------EVLV 213 (317)
Q Consensus 178 v~e~~~~gsL~~~l~~~~~~------------------------------~~~~~~~~~i~~--------------qi~~ 213 (317)
||+|++|..+...+...... .+...++..+.. ....
T Consensus 103 v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~ 182 (321)
T COG3173 103 VMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADR 182 (321)
T ss_pred EEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHH
Confidence 99999874333222110000 000001111111 1122
Q ss_pred HHHHHHHc--------CCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913 214 GLEYLHAL--------GIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL 258 (317)
Q Consensus 214 al~~LH~~--------~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 258 (317)
-..+|+.+ .++|+|+.+.||+++.++-+-|+||+++...++...+
T Consensus 183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~Dl 235 (321)
T COG3173 183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLEDL 235 (321)
T ss_pred HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCcHHHH
Confidence 24455443 3799999999999998888999999999877765544
No 479
>PLN02236 choline kinase
Probab=97.61 E-value=0.00053 Score=62.20 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=83.8
Q ss_pred EeeeecccCCeEEEEEEEcCC---CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecCEEEEEE
Q 042913 104 LVRHLGTGNLGRVFLCHLRDC---TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSHYICFLI 179 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 179 (317)
-++.|-.|-.-.+|++..... .++.|++|+.... ....++ ..+|..+++.+...++ +++++.+... .|.
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~--t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~ 112 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEG--VELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVE 112 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCC--CCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEE
Confidence 334555588889999875421 2468899987554 222222 3678888888864433 4666665432 578
Q ss_pred cccCCCChhcc-c----------------ccC--CCC--CCCHHHHHHHHHHH-----------------HHHHHHHH--
Q 042913 180 DYCPNGDLHSL-L----------------PKQ--PNN--RFSLQAVRFFAAEV-----------------LVGLEYLH-- 219 (317)
Q Consensus 180 e~~~~gsL~~~-l----------------~~~--~~~--~~~~~~~~~i~~qi-----------------~~al~~LH-- 219 (317)
+|+++.+|... + +.. +.. ...+..+..++.++ ...+..|.
T Consensus 113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~ 192 (344)
T PLN02236 113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE 192 (344)
T ss_pred EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence 99877666421 0 000 011 11122232332111 11122222
Q ss_pred ------HcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCC
Q 042913 220 ------ALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDV 254 (317)
Q Consensus 220 ------~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~ 254 (317)
...++|+|+++.|||+++ ++.++|+||..|...+.
T Consensus 193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV 234 (344)
T ss_pred hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence 125899999999999986 46899999999876554
No 480
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.58 E-value=0.002 Score=57.44 Aligned_cols=30 Identities=33% Similarity=0.599 Sum_probs=26.3
Q ss_pred cCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913 221 LGIIYRDLKPENILLREDGHIMLSDFDLCFQ 251 (317)
Q Consensus 221 ~~ivHrDikp~Nill~~~~~~kl~DFG~a~~ 251 (317)
.+++|+|+.+.||+++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 47899999999999987 6789999997754
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.53 E-value=0.0007 Score=61.07 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=50.0
Q ss_pred eecccCCeEEEEEEEcCCCCceEEEEEeehhhh-----cHHHHHHHHHHHHHHHhcC--CC-CcceEEEEEEecCEEEEE
Q 042913 107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-----SAKKLSHVQMEAEILSMLD--HP-FLPTLYAHLEVSHYICFL 178 (317)
Q Consensus 107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~~~~~lv 178 (317)
.||-|....||++.... .++.|+||.-..-.. .+-..++...|.+.|+... -| .++++|.+ +.....+|
T Consensus 2 EigdGnlN~VfrV~~~~-g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQE-GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCC-CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceeh
Confidence 58999999999998653 336899997642211 1233456677888887764 24 56666654 34556799
Q ss_pred EcccCC
Q 042913 179 IDYCPN 184 (317)
Q Consensus 179 ~e~~~~ 184 (317)
||+++.
T Consensus 79 MEdL~~ 84 (370)
T TIGR01767 79 MEDLSH 84 (370)
T ss_pred HhhCcc
Confidence 999854
No 482
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.49 E-value=0.0014 Score=59.10 Aligned_cols=150 Identities=13% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecCEEE
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSHYIC 176 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~ 176 (317)
....+.. |..|-.-.+|++...... +..|++|+..... . ..-...+|..+++.+...++ +++++++. ++
T Consensus 15 ~~i~i~~-l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t--~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G--- 86 (330)
T PLN02421 15 SDFSVER-ISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT--D-YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG--- 86 (330)
T ss_pred CceEEEE-eCCcccceEEEEEecCCCCCCceEEEEEecCCc--C-eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---
Confidence 3444444 444777789988655311 2478899875432 1 22234668888888865444 46666653 32
Q ss_pred EEEcccCCCChhc--c-----c----------ccC--CCCC-C-CHHHHHHHHHHH----------------------HH
Q 042913 177 FLIDYCPNGDLHS--L-----L----------PKQ--PNNR-F-SLQAVRFFAAEV----------------------LV 213 (317)
Q Consensus 177 lv~e~~~~gsL~~--~-----l----------~~~--~~~~-~-~~~~~~~i~~qi----------------------~~ 213 (317)
+|.+|+++..|.. + + +.. +... . .+..+..+..++ ..
T Consensus 87 ~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 166 (330)
T PLN02421 87 MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRD 166 (330)
T ss_pred EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHH
Confidence 5899997766532 1 1 000 0010 1 122222222221 11
Q ss_pred HHHHHHH----cC----CeeccCCCCcEEEcc-CCcEEEeeecccccCCCCCC
Q 042913 214 GLEYLHA----LG----IIYRDLKPENILLRE-DGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 214 al~~LH~----~~----ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~~~~ 257 (317)
-+..+.. .+ ++|+|+.+.|||+++ ++.++|+||..|-..+..-.
T Consensus 167 ~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fD 219 (330)
T PLN02421 167 EIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYD 219 (330)
T ss_pred HHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHH
Confidence 1222221 12 789999999999975 57899999999866554333
No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.41 E-value=0.0025 Score=58.59 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=52.3
Q ss_pred EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh--c---HHHHHHHHHHHHHHHhcC---CCCcceEEEEEEecCEE
Q 042913 104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL--S---AKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVSHYI 175 (317)
Q Consensus 104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~ 175 (317)
..+.||-|....||+.... ++.++||.-..... . +-...+...|.+.|+.+. ..++++++.++. +..
T Consensus 36 ~~~eiggGn~N~VyrV~~~---~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~ 110 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS---SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMA 110 (418)
T ss_pred eEEEcCCCceeeEEEEEcC---CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCC
Confidence 4677899999999998753 35689998652211 1 113455566777777664 357888998776 345
Q ss_pred EEEEcccCC
Q 042913 176 CFLIDYCPN 184 (317)
Q Consensus 176 ~lv~e~~~~ 184 (317)
+++||++++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 788999966
No 484
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=97.34 E-value=0.00072 Score=56.82 Aligned_cols=30 Identities=37% Similarity=0.564 Sum_probs=21.3
Q ss_pred CCeeccCCCCcEEE-ccCCcEEEeeeccccc
Q 042913 222 GIIYRDLKPENILL-REDGHIMLSDFDLCFQ 251 (317)
Q Consensus 222 ~ivHrDikp~Nill-~~~~~~kl~DFG~a~~ 251 (317)
-++|+|+.|.|||+ +.++.++|+||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 48899999999999 7889999999999854
No 485
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.29 E-value=0.00022 Score=68.19 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccc
Q 042913 208 AAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQE 286 (317)
Q Consensus 208 ~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 286 (317)
+.+++.||.|+|. .++||++|.|++|.++..+..||+.|+++....+... ..-..++..-..-...-..|.+|||.-.
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~-~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE-YPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc-cccccCCCCCChhhccCcccccchhhcc
Confidence 3455699999997 5899999999999999999999999999876554332 2222222221222223345777777655
Q ss_pred cccceeccchhhhccCCcccccccC
Q 042913 287 NVMEFVAEPRREQREHPAQYSVEQP 311 (317)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (317)
.+. ....|.-+++..++-.+
T Consensus 184 ~~~-----~~~sd~fSlG~li~~i~ 203 (700)
T KOG2137|consen 184 TTN-----TPASDVFSLGVLIYTIY 203 (700)
T ss_pred ccc-----cccccceeeeeEEEEEe
Confidence 333 34555656665555555
No 486
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.27 E-value=0.0048 Score=55.13 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=28.3
Q ss_pred CCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913 222 GIIYRDLKPENILLREDGHIMLSDFDLCFQS 252 (317)
Q Consensus 222 ~ivHrDikp~Nill~~~~~~kl~DFG~a~~~ 252 (317)
+++|+|+.+.|||++.++.+.|+||..|..-
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d 227 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASFA 227 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence 6999999999999999999999999998653
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.23 E-value=0.0048 Score=54.39 Aligned_cols=75 Identities=17% Similarity=0.242 Sum_probs=46.9
Q ss_pred EEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC---CCCcceEEEEEEecCEEEEEE
Q 042913 103 KLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVSHYICFLI 179 (317)
Q Consensus 103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~ 179 (317)
+-.+.|+-|....+|+.. . +++.+.||+-... ....+..|.+-|+.|. .-.+++++++....+.-||||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~-~~~~~FvK~~~~~-----~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll 91 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--T-DGGSYFVKVNSES-----GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL 91 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--T-TS-EEEEEEEEGG-----GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred eeeEecCCCChhheEEEE--C-CCccEEEEecChh-----hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence 445678889999999876 2 5788999987632 2245667777777773 456889999888777779999
Q ss_pred cccCCC
Q 042913 180 DYCPNG 185 (317)
Q Consensus 180 e~~~~g 185 (317)
||++.+
T Consensus 92 e~l~~~ 97 (288)
T PF03881_consen 92 EFLEMG 97 (288)
T ss_dssp E-----
T ss_pred EeecCC
Confidence 999766
No 488
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=97.16 E-value=0.002 Score=57.67 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=55.6
Q ss_pred ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913 171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLC 249 (317)
Q Consensus 171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a 249 (317)
+..+.|++|++. |++|.-+- ...++++..++.+.+..+.-+.. ...-|||+.-.||||+ +|+|.|+||-+|
T Consensus 297 e~~y~yl~~kdh-gt~is~ik------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfkls 368 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISIIK------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLS 368 (488)
T ss_pred CceEEEEEEecC-Cceeeeee------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeee
Confidence 445678888886 66664432 13567777888877777666654 3688999999999999 899999999999
Q ss_pred cc
Q 042913 250 FQ 251 (317)
Q Consensus 250 ~~ 251 (317)
+.
T Consensus 369 Rl 370 (488)
T COG5072 369 RL 370 (488)
T ss_pred ec
Confidence 83
No 489
>PTZ00384 choline kinase; Provisional
Probab=97.12 E-value=0.0034 Score=57.65 Aligned_cols=81 Identities=10% Similarity=0.217 Sum_probs=48.2
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCCCCce-----EEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecC
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDCTSAN-----FALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSH 173 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~-----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~ 173 (317)
..+.+. .|..|-...+|++......+.. |++++... .....-...+|+++++.+...++ +++++.+..
T Consensus 51 ~~i~i~-~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~---~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~-- 124 (383)
T PTZ00384 51 EFIEIK-KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSST---YNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD-- 124 (383)
T ss_pred ccEEEE-EeCCcccceEEEEEecCCCCCccccceEEEEeccC---CCceEeccHHHHHHHHHHHhCCCCCeEEEecCC--
Confidence 344444 5555888999999765422223 33333211 11112234668999999875444 567776642
Q ss_pred EEEEEEcccCCCChh
Q 042913 174 YICFLIDYCPNGDLH 188 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~ 188 (317)
++|.||++|.+|.
T Consensus 125 --g~l~efIeGr~l~ 137 (383)
T PTZ00384 125 --FTIQEWVEGNTMG 137 (383)
T ss_pred --EEEEEEeccccCC
Confidence 6999999887764
No 490
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.06 E-value=0.014 Score=52.47 Aligned_cols=136 Identities=28% Similarity=0.385 Sum_probs=80.4
Q ss_pred ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC------cceEEEEE--EecC--EEEE
Q 042913 108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF------LPTLYAHL--EVSH--YICF 177 (317)
Q Consensus 108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~--~~~~--~~~l 177 (317)
|.+ .-..+|+....+ | .+++|+.+.. ... .++..|+..++.|.-.. +..+-|.. .-.+ +.+-
T Consensus 34 l~s-~eN~~f~~~~~~--g-~~iLki~~~~-~~~---~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~ 105 (331)
T COG2334 34 LNS-EENSNFRVQTED--G-RYILKIYRPG-WTR---AEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAA 105 (331)
T ss_pred ccc-ccCceEEEEecC--C-CeEEEEecCC-CCH---HHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEE
Confidence 444 556789887664 4 4499998775 333 34566777777774211 22221211 1233 7889
Q ss_pred EEcccCCCChhc-cccc------------------C----CC--CCCCHHH-------------HHHHHHHHHHHHHHHH
Q 042913 178 LIDYCPNGDLHS-LLPK------------------Q----PN--NRFSLQA-------------VRFFAAEVLVGLEYLH 219 (317)
Q Consensus 178 v~e~~~~gsL~~-~l~~------------------~----~~--~~~~~~~-------------~~~i~~qi~~al~~LH 219 (317)
+++|++|..+.. .... . ++ ....|.. -.....++...+..+.
T Consensus 106 lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~ 185 (331)
T COG2334 106 LFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLL 185 (331)
T ss_pred EEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHH
Confidence 999998888873 2100 0 00 0112210 0112334444555555
Q ss_pred H--------cC--CeeccCCCCcEEEccCCc-EEEeeeccccc
Q 042913 220 A--------LG--IIYRDLKPENILLREDGH-IMLSDFDLCFQ 251 (317)
Q Consensus 220 ~--------~~--ivHrDikp~Nill~~~~~-~kl~DFG~a~~ 251 (317)
+ .+ +||+|+.|.||+++.+.. +.++|||.|..
T Consensus 186 ~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 186 ARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred hhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 4 23 999999999999998774 99999999854
No 491
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.04 E-value=0.0034 Score=57.44 Aligned_cols=77 Identities=18% Similarity=0.379 Sum_probs=52.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhh----hcHHHHHHHHHHHHHHHhcC--CC-CcceEEEEEEecCEEEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL----LSAKKLSHVQMEAEILSMLD--HP-FLPTLYAHLEVSHYICF 177 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~~~~~l 177 (317)
.+.||-|.-.-||++.+.. .++.|+||.-..-. ..+-..++...|.++|+.+. .| +++++|.+ +.....+
T Consensus 34 ~~eigdGnlN~VfrV~~~~-~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~ 110 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQ-KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCC 110 (409)
T ss_pred eeEcCCCceEEEEEEeeCC-CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhH
Confidence 6778999999999998743 35679999753221 11234567778888888764 34 56677754 3445678
Q ss_pred EEcccCC
Q 042913 178 LIDYCPN 184 (317)
Q Consensus 178 v~e~~~~ 184 (317)
|||+++.
T Consensus 111 vMEdL~~ 117 (409)
T PRK12396 111 VMEDLSD 117 (409)
T ss_pred HHHhCcc
Confidence 9999854
No 492
>PRK06148 hypothetical protein; Provisional
Probab=96.95 E-value=0.015 Score=60.20 Aligned_cols=140 Identities=22% Similarity=0.301 Sum_probs=77.7
Q ss_pred eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--CCC--cceEEE--------EEEe-c
Q 042913 106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--HPF--LPTLYA--------HLEV-S 172 (317)
Q Consensus 106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~--iv~~~~--------~~~~-~ 172 (317)
+.|+ |..-.+|+.... ++..+++|+.+... . ...+..|..+|..|. .+. +.+++- .... +
T Consensus 31 ~~L~-s~~d~nf~v~~~--~g~~yVLKi~~~~~-~---~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~ 103 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTD--DGADYILKIVNPSE-P---RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPD 103 (1013)
T ss_pred eecC-CcCCceEEEEeC--CCCeEEEEEcCCcc-c---hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCC
Confidence 4564 456788988655 36789999997542 1 123344555665552 122 333331 1111 2
Q ss_pred C--EEEEEEcccCCCChhccccc---------------------C--C--CCCCCHH-----------------HHHHHH
Q 042913 173 H--YICFLIDYCPNGDLHSLLPK---------------------Q--P--NNRFSLQ-----------------AVRFFA 208 (317)
Q Consensus 173 ~--~~~lv~e~~~~gsL~~~l~~---------------------~--~--~~~~~~~-----------------~~~~i~ 208 (317)
+ +.+.+++|++|..|.+.... . + ...+.|. ..+.++
T Consensus 104 G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l 183 (1013)
T PRK06148 104 GEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALV 183 (1013)
T ss_pred CceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHH
Confidence 2 56778999998877652110 0 0 0111111 112222
Q ss_pred HHHHHHHH-----HHH--HcCCeeccCCCCcEEEccCC--cEE-EeeecccccC
Q 042913 209 AEVLVGLE-----YLH--ALGIIYRDLKPENILLREDG--HIM-LSDFDLCFQS 252 (317)
Q Consensus 209 ~qi~~al~-----~LH--~~~ivHrDikp~Nill~~~~--~~k-l~DFG~a~~~ 252 (317)
.+++.... .+. ..++||+|+.+.|||++.++ .+. |+|||.+...
T Consensus 184 ~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~ 237 (1013)
T PRK06148 184 ERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA 237 (1013)
T ss_pred HHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence 33333322 121 14799999999999999775 555 9999987543
No 493
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.85 E-value=0.046 Score=49.18 Aligned_cols=72 Identities=13% Similarity=-0.012 Sum_probs=42.6
Q ss_pred cCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEE---E--EEEecCEEEEEEcccC
Q 042913 111 GNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLY---A--HLEVSHYICFLIDYCP 183 (317)
Q Consensus 111 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~---~--~~~~~~~~~lv~e~~~ 183 (317)
+.-..||+....+ +..+++|+.+..... ...+..|.+.+..|... .++... | ....++..+.|+++++
T Consensus 36 s~eN~vy~v~~~~--~~~~vlKv~r~~~~~---~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~ 110 (325)
T PRK11768 36 SYENRVYQFGDED--GRRVVAKFYRPERWS---DAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG 110 (325)
T ss_pred cccceEEEEecCC--CCEEEEEEcCcccCC---HHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence 4456799886553 678999988643222 24455677777666321 122211 1 1233567889999997
Q ss_pred CCCh
Q 042913 184 NGDL 187 (317)
Q Consensus 184 ~gsL 187 (317)
|...
T Consensus 111 G~~~ 114 (325)
T PRK11768 111 GRAP 114 (325)
T ss_pred CCCC
Confidence 7653
No 494
>PTZ00296 choline kinase; Provisional
Probab=96.64 E-value=0.022 Score=53.43 Aligned_cols=80 Identities=14% Similarity=0.201 Sum_probs=49.7
Q ss_pred CCeEEeeeecccCCeEEEEEEEcCC-------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEe
Q 042913 100 RHLKLVRHLGTGNLGRVFLCHLRDC-------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEV 171 (317)
Q Consensus 100 ~~y~i~~~lg~G~~g~Vy~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~ 171 (317)
.+. -++.|..|-.-.+|++..... .++.|++|+.-.. .... -....|..+++.+...+| .++++.+.
T Consensus 106 ~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~--te~l-IdR~~E~~v~~~ls~~gi~P~l~~~f~- 180 (442)
T PTZ00296 106 DDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKD--VDEL-YNPISEFEVYKTMSKYRIAPQLLNTFS- 180 (442)
T ss_pred ccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCC--ccce-eCHHHHHHHHHHHHHCCCCCceEEEeC-
Confidence 344 556676777888999876531 1467888987543 1222 234567888777764444 35666553
Q ss_pred cCEEEEEEcccCCCCh
Q 042913 172 SHYICFLIDYCPNGDL 187 (317)
Q Consensus 172 ~~~~~lv~e~~~~gsL 187 (317)
+ +.|.+|++|.+|
T Consensus 181 g---g~I~efi~g~~l 193 (442)
T PTZ00296 181 G---GRIEEWLYGDPL 193 (442)
T ss_pred C---CEEEEeeCCccC
Confidence 2 457899987744
No 495
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.49 E-value=0.015 Score=53.06 Aligned_cols=132 Identities=19% Similarity=0.254 Sum_probs=85.6
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcce--------EEEEEEecCEE
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPT--------LYAHLEVSHYI 175 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~--------~~~~~~~~~~~ 175 (317)
.+.||+|+-+.+|-.-.. +..+-|+.+......+. + .+..|... .||-+-. ++|- .....+
T Consensus 16 gr~LgqGgea~ly~l~e~----~d~VAKIYh~Pppa~~a--q---k~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~i 85 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV----RDQVAKIYHAPPPAAQA--Q---KVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVI 85 (637)
T ss_pred CccccCCccceeeecchh----hchhheeecCCCchHHH--H---HHHHhccCCCCcchhhhhcccHHHhhCC-Ccccee
Confidence 456999999999964222 23455887654221111 1 12223322 3543322 1111 122337
Q ss_pred EEEEcccCCC-Chhccccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeee
Q 042913 176 CFLIDYCPNG-DLHSLLPK----QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDF 246 (317)
Q Consensus 176 ~lv~e~~~~g-sL~~~l~~----~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DF 246 (317)
.++|+.+.+. .+.+++.- +....+.|..+++.++.|+.+...||+.|.+-+|++++|+|+.+++.|.|.|=
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcc
Confidence 7889888765 23344321 22344688999999999999999999999999999999999999999999873
No 496
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.00 E-value=0.02 Score=52.33 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=43.8
Q ss_pred EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEc
Q 042913 174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH-ALGIIYRDLKPENILLR 236 (317)
Q Consensus 174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivHrDikp~Nill~ 236 (317)
...|+-+|..|.++..+++. ...+++....++.-...||-.|- -.+++|.|+.|.||++-
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~---~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir 379 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKW---KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR 379 (565)
T ss_pred cceeeeeccccccHHhhhhc---ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence 34667778888888888854 33456666777766666655443 46899999999999995
No 497
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=95.94 E-value=0.034 Score=56.88 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE----EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 042913 143 KLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC----FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYL 218 (317)
Q Consensus 143 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~L 218 (317)
.+.....|++.+..+.|+|++.++.+.......- +..+++...++...+.. -..++....+.+..+++.||.|+
T Consensus 225 ~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~--v~~i~~~~~r~~~~~~~~GL~~~ 302 (1351)
T KOG1035|consen 225 EIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS--VGSIPLETLRILHQKLLEGLAYL 302 (1351)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh--ccccCHHHHHHHHHHHhhhHHHH
Confidence 3444556777788889999999998865443322 34567777788877744 46788999999999999999999
Q ss_pred HHcCCeeccCCCC---cEEEccCCcEEEe--eecccccCCCCCCeeecccccccccccccccCCCCCccccccccccee-
Q 042913 219 HALGIIYRDLKPE---NILLREDGHIMLS--DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV- 292 (317)
Q Consensus 219 H~~~ivHrDikp~---Nill~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~- 292 (317)
|+....|.-+... +..++..+.+.+. ||+..+.+........ ..-++.+..++..+..
T Consensus 303 h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~----------------~~~~~~~~~~e~~~~~~ 366 (1351)
T KOG1035|consen 303 HSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS----------------DLLAEIRNADEDLKENT 366 (1351)
T ss_pred HHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchh----------------hcCcccccccccccccc
Confidence 9997666655555 4444556666666 8888766554332111 1122223333322222
Q ss_pred -ccchhhhccCCcccccccCCC
Q 042913 293 -AEPRREQREHPAQYSVEQPGG 313 (317)
Q Consensus 293 -~~~~~~~~~~~~~~~~e~~~G 313 (317)
...+..++|.++.-.+-+.+|
T Consensus 367 ~~~~r~~dL~~lgll~~~~~~~ 388 (1351)
T KOG1035|consen 367 AKKSRLTDLWCLGLLLLQLSQG 388 (1351)
T ss_pred chhhhhhHHHHHHHHHhhhhhc
Confidence 234556778777766666655
No 498
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.86 E-value=0.0068 Score=49.66 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=28.6
Q ss_pred CeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913 223 IIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT 257 (317)
Q Consensus 223 ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~ 257 (317)
.+|+|+.|.||++++++ ++|+||+.|-..++.-.
T Consensus 79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~D 112 (188)
T PRK10271 79 PLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALE 112 (188)
T ss_pred eecCCCCCccEEEECCC-EEEEeCCcccCCCHHHH
Confidence 68999999999998776 99999999977665433
No 499
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.66 E-value=0.08 Score=44.75 Aligned_cols=76 Identities=20% Similarity=0.325 Sum_probs=50.9
Q ss_pred eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc---CCCCcceEEEEEEecCEEEEEEcc
Q 042913 105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML---DHPFLPTLYAHLEVSHYICFLIDY 181 (317)
Q Consensus 105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~lv~e~ 181 (317)
.+.+.-|.--..|...+. ...+-+|+-.. .....+..|+.-|..| +.-.|.+++.+....++.|+||||
T Consensus 21 r~~v~gG~inea~~v~dg---~~~~FvK~n~~-----~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~ 92 (286)
T COG3001 21 REEVSGGDINEAWRLRDG---TDPFFVKCNQR-----EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEY 92 (286)
T ss_pred ccccCCccccceeEeecC---CcceEEEecch-----hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEee
Confidence 334444444455554332 46777887533 3445566677666665 456788999999999999999999
Q ss_pred cCCCChh
Q 042913 182 CPNGDLH 188 (317)
Q Consensus 182 ~~~gsL~ 188 (317)
++-+.+.
T Consensus 93 L~~~~~d 99 (286)
T COG3001 93 LPTGPLD 99 (286)
T ss_pred ccCCCCC
Confidence 9877665
No 500
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.62 E-value=0.033 Score=46.76 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH--cC
Q 042913 145 SHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA--LG 222 (317)
Q Consensus 145 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~--~~ 222 (317)
..++++.++++++. .|+++.. .....+.+++|+|-. -...... +...=+.+|.-.|+ .+
T Consensus 103 ~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~-----------~~i~~~N----~i~agi~~L~~fH~~~~~ 163 (308)
T PF07387_consen 103 ALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYK-----------IKINFSN----FITAGIKDLMDFHSENQH 163 (308)
T ss_pred hhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccC-----------cccchhH----HHHHhHHHHHHhhccCCC
Confidence 34577888888764 3555552 244557788998821 1111111 11222466778884 46
Q ss_pred CeeccCCCCcEEEccCCcEEEeeecc
Q 042913 223 IIYRDLKPENILLREDGHIMLSDFDL 248 (317)
Q Consensus 223 ivHrDikp~Nill~~~~~~kl~DFG~ 248 (317)
.+|+|..|+||+-|..|.+||.|=+.
T Consensus 164 ~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 164 CLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred eecCCCChhheeecCCCCEEecChhh
Confidence 99999999999999999999999775
Done!