Query         042913
Match_columns 317
No_of_seqs    372 out of 3370
Neff          9.5 
Searched_HMMs 29240
Date          Mon Mar 25 19:06:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042913hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b9d_A Serine/threonine-protei 100.0 4.4E-49 1.5E-53  353.3  12.6  200   99-314    23-222 (350)
  2 4fih_A Serine/threonine-protei 100.0 1.4E-48 4.8E-53  349.5  13.0  195   99-314    73-267 (346)
  3 4fie_A Serine/threonine-protei 100.0 1.3E-48 4.5E-53  358.0  13.0  196   99-315   150-345 (423)
  4 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.5E-48 1.2E-52  342.1  13.1  201   98-314    30-231 (311)
  5 3hyh_A Carbon catabolite-derep 100.0 3.8E-46 1.3E-50  324.6  12.6  198   99-315    12-211 (275)
  6 3fpq_A Serine/threonine-protei 100.0 2.2E-45 7.6E-50  322.3  16.8  193  102-315    28-228 (290)
  7 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-47 1.3E-51  335.3   5.5  203   96-315    20-225 (304)
  8 4g3f_A NF-kappa-beta-inducing  100.0 6.3E-46 2.2E-50  331.4  10.1  198   98-315    56-255 (336)
  9 3omv_A RAF proto-oncogene seri 100.0 4.1E-45 1.4E-49  322.9  13.0  205   95-315    31-236 (307)
 10 4asz_A BDNF/NT-3 growth factor 100.0 5.6E-45 1.9E-49  321.7  11.9  205   96-315     9-230 (299)
 11 4aoj_A High affinity nerve gro 100.0 1.9E-44 6.7E-49  322.4  14.8  206   95-315    36-260 (329)
 12 4b99_A Mitogen-activated prote 100.0 4.8E-44 1.6E-48  327.6  15.8  202  100-315    54-261 (398)
 13 4g31_A Eukaryotic translation  100.0 2.8E-44 9.6E-49  317.5  13.7  207   99-312     4-225 (299)
 14 4gt4_A Tyrosine-protein kinase 100.0 1.2E-43   4E-48  314.5  11.9  207   95-315    21-247 (308)
 15 3v5w_A G-protein coupled recep 100.0 2.1E-42 7.2E-47  330.9  14.3  202   94-314   183-388 (689)
 16 3hmm_A TGF-beta receptor type- 100.0 1.5E-42 5.3E-47  307.4  11.4  202   99-315     2-216 (303)
 17 4ase_A Vascular endothelial gr 100.0 8.4E-42 2.9E-46  307.8  13.2  206   96-315    60-287 (353)
 18 3uto_A Twitchin; kinase, muscl 100.0 2.8E-41 9.4E-46  323.3  15.2  198   98-315   155-354 (573)
 19 4f9c_A Cell division cycle 7-r 100.0 1.6E-41 5.6E-46  307.5  12.7  204   99-316    20-247 (361)
 20 3fe3_A MAP/microtubule affinit 100.0 7.4E-39 2.5E-43  287.1  16.1  200   95-313    10-210 (328)
 21 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-38 3.6E-43  288.9  13.9  202   95-314    18-221 (353)
 22 1o6l_A RAC-beta serine/threoni 100.0 2.5E-38 8.4E-43  284.7  15.6  200   97-314     2-202 (337)
 23 4aw2_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43  296.5  13.0  208   96-314    70-278 (437)
 24 4dc2_A Protein kinase C IOTA t 100.0 2.2E-38 7.5E-43  290.5  13.7  202   95-314    47-250 (396)
 25 4fr4_A YANK1, serine/threonine 100.0   5E-38 1.7E-42  287.1  15.8  205   93-313     8-213 (384)
 26 3a8x_A Protein kinase C IOTA t 100.0 6.4E-38 2.2E-42  283.0  15.9  201   96-314     5-207 (345)
 27 1fot_A TPK1 delta, CAMP-depend 100.0 4.6E-38 1.6E-42  280.8  14.3  197   97-314     3-200 (318)
 28 3v8s_A RHO-associated protein  100.0 2.7E-38 9.4E-43  291.3  12.0  205   96-314    65-270 (410)
 29 1xjd_A Protein kinase C, theta 100.0 7.2E-38 2.5E-42  282.5  14.4  201   96-314    13-215 (345)
 30 4eqm_A Protein kinase; transfe 100.0 5.9E-38   2E-42  277.0  13.3  202   95-313     6-208 (294)
 31 2i0e_A Protein kinase C-beta I 100.0   5E-38 1.7E-42  284.4  13.1  203   94-314    14-218 (353)
 32 3fxz_A Serine/threonine-protei 100.0 9.8E-38 3.4E-42  276.0  14.3  195   98-313    18-212 (297)
 33 3zgw_A Maternal embryonic leuc 100.0 5.9E-38   2E-42  283.2  13.0  200   96-313     6-206 (347)
 34 2vd5_A DMPK protein; serine/th 100.0 6.9E-38 2.4E-42  288.8  13.3  208   96-314    57-267 (412)
 35 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-37 7.5E-42  275.1  16.1  210   96-314     6-219 (310)
 36 1nxk_A MAP kinase-activated pr 100.0 1.1E-37 3.7E-42  286.9  14.5  194   97-314    58-260 (400)
 37 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-37   4E-42  281.8  14.2  201   93-314    34-235 (350)
 38 2psq_A Fibroblast growth facto 100.0 1.8E-37 6.2E-42  282.6  15.3  205   95-313    76-302 (370)
 39 2bdw_A Hypothetical protein K1 100.0   3E-37   1E-41  280.3  16.8  199   97-314    26-227 (362)
 40 2r5t_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42  285.3  12.3  201   96-314    34-236 (373)
 41 3gni_B Strad alpha; kinase fol 100.0 4.6E-37 1.6E-41  281.6  17.5  212   96-314    21-234 (389)
 42 2yab_A Death-associated protei 100.0 1.8E-37 6.3E-42  281.5  14.4  198   98-314    10-215 (361)
 43 3rp9_A Mitogen-activated prote 100.0   2E-37 6.7E-42  290.1  14.3  207   99-313    52-280 (458)
 44 3soa_A Calcium/calmodulin-depe 100.0 3.1E-37 1.1E-41  287.1  15.5  200   98-315     9-211 (444)
 45 1tki_A Titin; serine kinase, m 100.0 3.8E-37 1.3E-41  275.3  15.0  195   99-314     4-200 (321)
 46 2zv2_A Calcium/calmodulin-depe 100.0 6.7E-37 2.3E-41  270.5  16.3  203   95-313     8-236 (298)
 47 2acx_A G protein-coupled recep 100.0 4.1E-37 1.4E-41  292.9  15.8  203   95-314   179-382 (576)
 48 3o0g_A Cell division protein k 100.0 6.1E-37 2.1E-41  270.0  15.6  200   99-315     1-201 (292)
 49 3h4j_B AMPK kdaid, SNF1-like p 100.0   4E-37 1.4E-41  276.7  14.5  199   97-315     6-207 (336)
 50 3tki_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41  275.0  14.3  199   98-313     5-204 (323)
 51 3kul_A Ephrin type-A receptor  100.0 5.3E-37 1.8E-41  274.7  14.4  205   95-313    44-251 (325)
 52 3c4z_A Rhodopsin kinase; Ser/T 100.0   1E-36 3.4E-41  289.2  16.0  204   95-314   180-386 (543)
 53 2y94_A 5'-AMP-activated protei 100.0 8.6E-37 2.9E-41  286.2  14.8  204   92-313     8-212 (476)
 54 3c0i_A Peripheral plasma membr 100.0 6.1E-37 2.1E-41  277.2  13.3  202   96-313    20-229 (351)
 55 3a62_A Ribosomal protein S6 ki 100.0 5.7E-37 1.9E-41  274.8  12.6  203   95-314    12-218 (327)
 56 3p86_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41  271.7  12.6  202   94-313    31-235 (309)
 57 4ejn_A RAC-alpha serine/threon 100.0 3.8E-37 1.3E-41  287.3  10.9  203   95-315   143-348 (446)
 58 2y0a_A Death-associated protei 100.0 1.4E-36 4.9E-41  272.1  14.2  198   98-314     9-214 (326)
 59 2c30_A Serine/threonine-protei 100.0 2.2E-36 7.5E-41  270.3  15.3  215   79-314    24-238 (321)
 60 1kob_A Twitchin; kinase, intra 100.0 2.8E-36 9.6E-41  276.1  16.0  196   99-314    50-247 (387)
 61 3qd2_B Eukaryotic translation  100.0 1.3E-36 4.4E-41  272.0  13.3  210   99-315     5-274 (332)
 62 3niz_A Rhodanese family protei 100.0 1.6E-36 5.5E-41  270.0  13.7  201   96-314    17-217 (311)
 63 4euu_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41  271.3  13.0  205   96-313     5-219 (319)
 64 2izr_A Casein kinase I isoform 100.0   1E-36 3.4E-41  273.3  11.8  204   97-315     6-216 (330)
 65 3p1a_A MYT1 kinase, membrane-a 100.0 3.6E-36 1.2E-40  267.6  14.9  200   95-314    52-252 (311)
 66 3kk8_A Calcium/calmodulin depe 100.0 8.5E-36 2.9E-40  261.3  16.8  197   98-313     4-203 (284)
 67 3llt_A Serine/threonine kinase 100.0 6.8E-36 2.3E-40  270.9  16.7  201   91-314    26-256 (360)
 68 3ugc_A Tyrosine-protein kinase 100.0 1.5E-36 5.2E-41  267.7  11.0  206   94-314     4-214 (295)
 69 3ttj_A Mitogen-activated prote 100.0 2.9E-36   1E-40  282.4  13.3  196   98-315    60-261 (464)
 70 4hcu_A Tyrosine-protein kinase 100.0 3.9E-36 1.3E-40  261.6  13.2  198   96-313     6-204 (269)
 71 3ork_A Serine/threonine protei 100.0   6E-37   2E-41  272.6   8.1  204   95-313     7-215 (311)
 72 3n9x_A Phosphotransferase; mal 100.0 5.5E-36 1.9E-40  278.3  15.0  208   98-313    24-248 (432)
 73 3pfq_A PKC-B, PKC-beta, protei 100.0 2.6E-36 8.9E-41  294.4  13.1  204   93-314   334-539 (674)
 74 2w4o_A Calcium/calmodulin-depe 100.0 5.1E-36 1.7E-40  271.0  14.0  195   96-313    49-246 (349)
 75 3g33_A Cell division protein k 100.0 5.6E-36 1.9E-40  265.8  13.8  203   95-315     4-217 (308)
 76 2x4f_A Myosin light chain kina 100.0   1E-35 3.4E-40  271.4  15.8  194  101-314    88-285 (373)
 77 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.4E-36 2.2E-40  260.0  13.7  200   96-315     4-205 (268)
 78 3kfa_A Tyrosine-protein kinase 100.0 2.6E-36   9E-41  265.1  11.2  204   92-313     5-209 (288)
 79 3uc3_A Serine/threonine-protei 100.0   5E-36 1.7E-40  272.3  13.2  198   97-315    17-217 (361)
 80 3oz6_A Mitogen-activated prote 100.0 5.7E-36 1.9E-40  274.4  13.6  210   97-315     6-229 (388)
 81 3tt0_A Basic fibroblast growth 100.0 1.1E-35 3.9E-40  271.9  15.4  205   95-313    64-290 (382)
 82 1x8b_A WEE1HU, WEE1-like prote 100.0 8.4E-36 2.9E-40  261.2  14.0  199   98-315     9-229 (289)
 83 4agu_A Cyclin-dependent kinase 100.0 7.9E-36 2.7E-40  265.0  13.5  199   99-314     2-200 (311)
 84 1vzo_A Ribosomal protein S6 ki 100.0   9E-37 3.1E-41  276.5   7.5  205   95-313    49-258 (355)
 85 3gen_A Tyrosine-protein kinase 100.0 7.3E-36 2.5E-40  261.7  12.9  201   93-313    17-218 (283)
 86 3soc_A Activin receptor type-2 100.0 3.6E-36 1.2E-40  268.9  11.1  203   94-313    18-234 (322)
 87 2ivs_A Proto-oncogene tyrosine 100.0 8.7E-36   3E-40  264.8  13.3  206   94-313    17-249 (314)
 88 1ob3_A PFPK5, cell division co 100.0 2.9E-36 9.9E-41  265.2   9.9  198  100-315     2-199 (288)
 89 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.2E-36 1.4E-40  273.0  11.3  200   96-314    61-282 (365)
 90 3dbq_A Dual specificity protei 100.0 9.8E-36 3.4E-40  268.4  13.6  204   96-313     5-216 (343)
 91 1opk_A P150, C-ABL, proto-onco 100.0 8.1E-36 2.8E-40  281.6  13.3  203   93-313   213-416 (495)
 92 3qup_A Tyrosine-protein kinase 100.0 3.3E-36 1.1E-40  269.0  10.0  208   92-313    15-236 (323)
 93 3cok_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40  259.4  13.6  199   99-314    10-209 (278)
 94 4e5w_A Tyrosine-protein kinase 100.0 1.5E-35   5E-40  262.1  14.0  207   93-313    14-225 (302)
 95 3fdn_A Serine/threonine-protei 100.0 9.4E-36 3.2E-40  260.6  12.7  199   96-314     5-204 (279)
 96 4eut_A Serine/threonine-protei 100.0   5E-36 1.7E-40  275.5  11.3  205   96-313     5-219 (396)
 97 2a2a_A Death-associated protei 100.0 1.1E-35 3.7E-40  265.6  13.1  197   98-313    10-214 (321)
 98 2qol_A Ephrin receptor; recept 100.0 4.7E-36 1.6E-40  273.6  10.8  207   95-315    40-250 (373)
 99 2owb_A Serine/threonine-protei 100.0 2.4E-35 8.1E-40  265.0  15.1  199   98-314    39-238 (335)
100 3mwu_A Calmodulin-domain prote 100.0 1.2E-35 4.2E-40  279.9  13.8  197   98-314    20-219 (486)
101 1luf_A Muscle-specific tyrosin 100.0 8.5E-36 2.9E-40  268.2  12.0  205   96-314    43-274 (343)
102 2h6d_A 5'-AMP-activated protei 100.0 2.2E-35 7.6E-40  257.6  14.3  203   93-313     4-207 (276)
103 3lb7_A RAF proto-oncogene seri 100.0 1.6E-35 5.4E-40  263.1  13.5  204   94-313    30-233 (307)
104 3vhe_A Vascular endothelial gr 100.0 1.1E-35 3.9E-40  269.1  12.8  204   96-313    18-292 (359)
105 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-35 3.8E-40  266.2  12.5  191  100-313     8-205 (325)
106 3lm5_A Serine/threonine-protei 100.0   1E-35 3.5E-40  266.6  12.1  203   94-313    22-229 (327)
107 2h34_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40  262.7  13.5  200   97-313    31-231 (309)
108 2rku_A Serine/threonine-protei 100.0 3.7E-35 1.3E-39  258.7  15.2  200   97-314    12-212 (294)
109 2qr7_A Ribosomal protein S6 ki 100.0 8.3E-36 2.8E-40  268.8  11.2  193   98-314    20-217 (342)
110 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-35   4E-40  261.5  11.8  207   91-313    15-221 (289)
111 3poz_A Epidermal growth factor 100.0 1.4E-35 4.7E-40  265.7  12.3  202   95-313    10-216 (327)
112 4fvq_A Tyrosine-protein kinase 100.0 6.2E-36 2.1E-40  262.8   9.8  196   96-313     4-214 (289)
113 3cbl_A C-FES, proto-oncogene t 100.0 5.3E-36 1.8E-40  273.6   9.6  203   95-313   109-312 (377)
114 1mp8_A Focal adhesion kinase 1 100.0 1.8E-35   6E-40  259.2  12.6  203   95-314    10-215 (281)
115 4aaa_A Cyclin-dependent kinase 100.0 2.2E-35 7.6E-40  264.7  13.4  200   98-314    23-222 (331)
116 3f3z_A Calcium/calmodulin-depe 100.0 2.4E-35 8.1E-40  257.6  13.3  193   99-313     8-203 (277)
117 3l9p_A Anaplastic lymphoma kin 100.0 4.8E-36 1.6E-40  273.0   9.1  205   95-313    66-283 (367)
118 3op5_A Serine/threonine-protei 100.0 1.7E-35 5.7E-40  269.0  12.5  209   97-315    32-260 (364)
119 2pmi_A Negative RE, cyclin-dep 100.0 6.1E-36 2.1E-40  266.9   9.4  199   99-314     4-206 (317)
120 2pvf_A Fibroblast growth facto 100.0 5.1E-35 1.7E-39  262.6  15.5  205   95-313    30-256 (334)
121 1cm8_A Phosphorylated MAP kina 100.0 1.3E-35 4.4E-40  270.1  11.8  195   99-315    24-224 (367)
122 3lxl_A Tyrosine-protein kinase 100.0 4.6E-35 1.6E-39  262.1  15.0  203   96-313    19-226 (327)
123 3hko_A Calcium/calmodulin-depe 100.0 1.3E-35 4.5E-40  267.3  11.4  205   99-313    25-272 (345)
124 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.5E-36 2.6E-40  267.7   9.7  201   97-315    31-236 (329)
125 2eue_A Carbon catabolite derep 100.0 1.1E-35 3.8E-40  259.6  10.5  198   97-313    10-208 (275)
126 3dls_A PAS domain-containing s 100.0 4.1E-36 1.4E-40  270.1   7.8  198   98-313    22-226 (335)
127 2xrw_A Mitogen-activated prote 100.0 3.3E-35 1.1E-39  267.8  13.8  195   98-314    23-223 (371)
128 1t4h_A Serine/threonine-protei 100.0 9.3E-35 3.2E-39  255.7  16.2  196   97-313    23-225 (290)
129 1u5q_A Serine/threonine protei 100.0 4.4E-35 1.5E-39  264.7  14.3  197   99-314    53-250 (348)
130 2vgo_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39  257.4  13.4  201   94-314     8-209 (284)
131 1t46_A HOMO sapiens V-KIT hard 100.0 3.8E-35 1.3E-39  260.6  13.5  204   96-313    19-244 (313)
132 1csn_A Casein kinase-1; phosph 100.0   4E-35 1.4E-39  258.7  13.5  207   94-315     4-217 (298)
133 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-34 7.1E-39  257.0  18.3  201   97-313    28-233 (318)
134 1rjb_A FL cytokine receptor; k 100.0 2.7E-35 9.2E-40  265.3  12.7  205   95-313    40-271 (344)
135 3q5i_A Protein kinase; CDPK, m 100.0 4.6E-35 1.6E-39  277.2  14.6  197   98-314    34-244 (504)
136 2zmd_A Dual specificity protei 100.0 3.2E-35 1.1E-39  269.6  13.1  205   96-314    52-264 (390)
137 2yex_A Serine/threonine-protei 100.0 9.3E-35 3.2E-39  253.5  15.3  199   99-313     6-204 (276)
138 3brb_A Proto-oncogene tyrosine 100.0 4.6E-35 1.6E-39  260.4  13.5  211   90-313    24-246 (313)
139 3lij_A Calcium/calmodulin depe 100.0 2.1E-35 7.1E-40  278.9  11.8  197   98-314    35-234 (494)
140 2ac3_A MAP kinase-interacting  100.0 1.4E-35 4.9E-40  263.9   9.9  208   99-314    11-223 (316)
141 2qkw_B Protein kinase; three-h 100.0   2E-35 6.7E-40  263.9  10.7  199   98-313    37-237 (321)
142 3bhy_A Death-associated protei 100.0 3.3E-35 1.1E-39  257.4  11.9  197   98-313     3-207 (283)
143 3mi9_A Cell division protein k 100.0 3.5E-35 1.2E-39  265.4  12.4  205   98-315    15-227 (351)
144 3eqc_A Dual specificity mitoge 100.0 2.1E-35 7.1E-40  267.8  10.9  202   93-315    26-229 (360)
145 3an0_A Dual specificity mitoge 100.0 2.6E-35 8.8E-40  265.1  11.3  205   94-313    45-253 (340)
146 1xbb_A Tyrosine-protein kinase 100.0 5.8E-35   2E-39  257.2  13.3  203   96-313    12-217 (291)
147 3is5_A Calcium-dependent prote 100.0 3.4E-35 1.1E-39  258.1  11.7  196   99-313    21-221 (285)
148 1mqb_A Ephrin type-A receptor  100.0 7.6E-35 2.6E-39  261.6  14.2  205   95-313    39-247 (333)
149 1qpc_A LCK kinase; alpha beta  100.0 6.1E-35 2.1E-39  255.3  13.2  200   94-313     7-207 (279)
150 3kvw_A DYRK2, dual specificity 100.0 1.4E-34 4.7E-39  268.6  16.3  198   95-315    92-297 (429)
151 2y7j_A Phosphorylase B kinase  100.0 8.7E-35   3E-39  264.4  14.6  202   99-314    93-302 (365)
152 3t9t_A Tyrosine-protein kinase 100.0 5.3E-35 1.8E-39  253.9  12.6  198   96-313     4-202 (267)
153 3i6u_A CDS1, serine/threonine- 100.0 9.4E-35 3.2E-39  268.9  15.1  201   97-314   132-341 (419)
154 2r3i_A Cell division protein k 100.0 4.3E-35 1.5E-39  258.7  12.1  199   99-313     2-200 (299)
155 1fvr_A Tyrosine-protein kinase 100.0 4.5E-35 1.5E-39  262.2  12.3  202   96-315    21-241 (327)
156 2a19_B Interferon-induced, dou 100.0   5E-35 1.7E-39  256.2  12.3  196   96-314     7-218 (284)
157 3nsz_A CK II alpha, casein kin 100.0 2.5E-34 8.7E-39  257.3  17.1  193   97-315    33-230 (330)
158 4f0f_A Serine/threonine-protei 100.0 8.4E-35 2.9E-39  255.4  13.6  198   96-313    15-224 (287)
159 3q4u_A Activin receptor type-1 100.0 5.9E-35   2E-39  257.9  12.4  201   96-313     4-219 (301)
160 1qcf_A Haematopoetic cell kina 100.0 2.5E-35 8.5E-40  275.5  10.5  202   94-315   182-385 (454)
161 1k9a_A Carboxyl-terminal SRC k 100.0 8.3E-35 2.8E-39  271.7  13.9  197   94-315   187-386 (450)
162 2x7f_A TRAF2 and NCK-interacti 100.0 5.7E-35   2E-39  261.1  12.2  204   97-314    21-231 (326)
163 3nyv_A Calmodulin-domain prote 100.0 2.6E-35 8.9E-40  277.5  10.4  199   96-314    22-224 (484)
164 3fme_A Dual specificity mitoge 100.0   5E-35 1.7E-39  257.0  11.5  204   96-313     3-209 (290)
165 2fst_X Mitogen-activated prote 100.0 3.8E-35 1.3E-39  267.0  11.1  195   99-315    28-228 (367)
166 3kex_A Receptor tyrosine-prote 100.0 2.1E-35 7.1E-40  264.3   9.0  201   96-313     9-214 (325)
167 1u59_A Tyrosine-protein kinase 100.0 3.1E-34 1.1E-38  252.0  16.3  203   96-313     5-210 (287)
168 2jii_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39  266.0   9.9  213   87-315    25-267 (352)
169 1ua2_A CAK, cell division prot 100.0 6.1E-35 2.1E-39  263.5  11.5  201   98-315     8-211 (346)
170 2wqm_A Serine/threonine-protei 100.0 1.8E-34 6.3E-39  256.1  14.4  201   97-313    29-232 (310)
171 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-34   7E-39  255.0  14.6  196   99-314    21-216 (303)
172 3kmu_A ILK, integrin-linked ki 100.0 4.8E-35 1.6E-39  254.4  10.3  199   95-313     5-207 (271)
173 1z57_A Dual specificity protei 100.0 2.5E-34 8.5E-39  257.7  15.0  201   92-314     6-231 (339)
174 3mtl_A Cell division protein k 100.0 1.7E-35 5.8E-40  264.8   7.4  197  100-314     2-198 (324)
175 2j7t_A Serine/threonine-protei 100.0 1.6E-35 5.5E-40  261.8   7.1  204   97-314    16-219 (302)
176 2w5a_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39  256.7   9.1  200   99-314     5-213 (279)
177 2w1i_A JAK2; chromosomal rearr 100.0   2E-34   7E-39  257.9  14.2  207   93-314    34-245 (326)
178 2wtk_C Serine/threonine-protei 100.0 9.7E-35 3.3E-39  257.1  11.8  202   99-313     4-209 (305)
179 3f66_A Hepatocyte growth facto 100.0 1.2E-34   4E-39  255.9  12.3  202   99-313    24-228 (298)
180 2buj_A Serine/threonine-protei 100.0 4.8E-35 1.6E-39  260.6   9.8  212   96-313    25-242 (317)
181 3uim_A Brassinosteroid insensi 100.0 1.6E-35 5.4E-40  264.9   6.7  201   97-314    27-232 (326)
182 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-34 5.2E-39  261.2  13.1  208   98-315     9-221 (353)
183 3cc6_A Protein tyrosine kinase 100.0 2.6E-34 8.7E-39  251.7  14.2  203   96-315     8-214 (281)
184 2i1m_A Macrophage colony-stimu 100.0 8.5E-35 2.9E-39  260.9  11.2  205   96-314    42-264 (333)
185 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.5E-35 2.6E-39  272.1  11.3  201   95-315   179-381 (452)
186 3lzb_A Epidermal growth factor 100.0 6.9E-35 2.4E-39  261.2  10.3  202   95-313    10-216 (327)
187 3qyz_A Mitogen-activated prote 100.0 2.2E-34 7.4E-39  261.7  13.7  198  100-314    27-229 (364)
188 1p4o_A Insulin-like growth fac 100.0 4.1E-35 1.4E-39  261.6   8.8  206   94-313    19-237 (322)
189 1wak_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39  264.2  13.4  199   93-314    30-290 (397)
190 2pzi_A Probable serine/threoni 100.0 2.2E-34 7.5E-39  281.8  14.4  197   93-315    73-274 (681)
191 1phk_A Phosphorylase kinase; g 100.0 5.8E-34   2E-38  251.3  15.7  202   98-313    15-225 (298)
192 2xir_A Vascular endothelial gr 100.0 1.5E-34 5.1E-39  257.1  11.8  204   96-313    23-247 (316)
193 2h8h_A Proto-oncogene tyrosine 100.0 8.8E-35   3E-39  277.0  10.8  200   96-315   263-464 (535)
194 1j1b_A Glycogen synthase kinas 100.0 3.7E-35 1.3E-39  271.7   7.9  197   96-315    50-255 (420)
195 3dtc_A Mitogen-activated prote 100.0   2E-34 6.9E-39  250.9  12.0  195   96-313     3-210 (271)
196 4fl3_A Tyrosine-protein kinase 100.0 1.5E-34 5.2E-39  280.2  12.4  201   98-313   366-569 (635)
197 2nru_A Interleukin-1 receptor- 100.0 1.8E-34 6.3E-39  255.7  11.9  216   78-314    13-231 (307)
198 2jam_A Calcium/calmodulin-depe 100.0 3.1E-34   1E-38  254.1  13.3  195   98-314     7-204 (304)
199 3pls_A Macrophage-stimulating  100.0   3E-34   1E-38  253.0  13.0  203  100-315    21-227 (298)
200 1blx_A Cyclin-dependent kinase 100.0 1.4E-34 4.9E-39  258.4  11.1  199   99-314    10-216 (326)
201 4exu_A Mitogen-activated prote 100.0 2.1E-34 7.2E-39  262.5  12.3  193   99-314    41-239 (371)
202 2ozo_A Tyrosine-protein kinase 100.0 1.9E-34 6.4E-39  278.7  12.7  203   96-313   331-536 (613)
203 2v62_A Serine/threonine-protei 100.0 1.3E-34 4.3E-39  261.4  10.6  208   97-315    34-259 (345)
204 3eb0_A Putative uncharacterize 100.0 1.4E-34 4.9E-39  264.6  10.7  195   98-315     5-240 (383)
205 2i6l_A Mitogen-activated prote 100.0 5.7E-34 1.9E-38  253.5  13.7  202   95-314     6-222 (320)
206 3com_A Serine/threonine-protei 100.0 3.9E-34 1.3E-38  254.4  12.6  196   97-313    26-221 (314)
207 3gxj_A TGF-beta receptor type- 100.0 2.4E-35 8.3E-40  260.5   4.8  198   99-313     2-214 (303)
208 2vwi_A Serine/threonine-protei 100.0 5.5E-35 1.9E-39  258.2   6.9  208   95-313    10-223 (303)
209 2wei_A Calmodulin-domain prote 100.0 3.1E-34 1.1E-38  252.0  11.7  196   98-313    20-218 (287)
210 2pml_X PFPK7, Ser/Thr protein  100.0 4.3E-34 1.5E-38  257.7  12.9  204   93-314    24-249 (348)
211 3ll6_A Cyclin G-associated kin 100.0 3.2E-34 1.1E-38  256.9  11.7  212   96-313    24-249 (337)
212 3uqc_A Probable conserved tran 100.0 1.1E-33 3.8E-38  248.8  14.7  174   93-313    23-198 (286)
213 2vuw_A Serine/threonine-protei 100.0 2.6E-34   9E-39  258.2  10.8  190   97-313    17-273 (336)
214 3byv_A Rhoptry kinase; malaria 100.0 1.3E-35 4.4E-40  271.0   2.3  200   99-314    72-310 (377)
215 2ycf_A Serine/threonine-protei 100.0 2.1E-34 7.2E-39  257.3   9.9  199   98-313     8-215 (322)
216 2yfx_A Tyrosine-protein kinase 100.0 2.9E-34 9.8E-39  257.0  10.7  207   95-315    25-245 (327)
217 3sv0_A Casein kinase I-like; t 100.0 7.4E-34 2.5E-38  266.7  13.9  204   97-315     4-212 (483)
218 1u46_A ACK-1, activated CDC42  100.0 4.1E-34 1.4E-38  251.3  11.0  204   96-313    14-221 (291)
219 1zy4_A Serine/threonine-protei 100.0 9.9E-34 3.4E-38  249.9  13.5  206   99-313     5-227 (303)
220 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-34 3.9E-39  264.1   7.6  198   99-315    61-292 (371)
221 3mdy_A Bone morphogenetic prot 100.0   6E-34   2E-38  255.4  12.2  200   97-313    34-248 (337)
222 3c1x_A Hepatocyte growth facto 100.0 1.5E-34 5.1E-39  263.6   8.3  203  100-315    89-295 (373)
223 3coi_A Mitogen-activated prote 100.0 6.9E-34 2.4E-38  257.2  12.5  193   99-314    23-221 (353)
224 2eu9_A Dual specificity protei 100.0 1.5E-33 5.3E-38  254.2  14.6  200   93-314    12-236 (355)
225 2dyl_A Dual specificity mitoge 100.0 7.9E-34 2.7E-38  252.6  12.1  204   96-313    21-225 (318)
226 4hgt_A Casein kinase I isoform 100.0 1.2E-33 4.2E-38  248.8  12.7  201   98-313     7-211 (296)
227 3g2f_A Bone morphogenetic prot 100.0 1.5E-33 5.2E-38  252.9  13.2  207   94-313     7-231 (336)
228 3cek_A Dual specificity protei 100.0 1.1E-33 3.7E-38  251.6  11.9  206   94-313    22-235 (313)
229 2clq_A Mitogen-activated prote 100.0 9.9E-34 3.4E-38  249.3  11.5  201   97-313    19-221 (295)
230 3m2w_A MAP kinase-activated pr 100.0 4.2E-33 1.4E-37  246.4  15.3  171   98-313    15-194 (299)
231 1byg_A CSK, protein (C-termina 100.0 3.2E-34 1.1E-38  250.7   7.7  194   95-313    16-211 (278)
232 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-33 1.7E-37  245.0  14.7  201   98-313     7-211 (296)
233 1q8y_A SR protein kinase; tran 100.0 1.4E-33 4.9E-38  256.5  11.4  197   94-313    13-231 (373)
234 3aln_A Dual specificity mitoge 100.0 2.5E-33 8.4E-38  250.8  12.5  203   96-313    18-225 (327)
235 2vx3_A Dual specificity tyrosi 100.0 4.7E-33 1.6E-37  254.5  14.6  200   93-315    47-256 (382)
236 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-33   5E-38  250.4  10.5  191   96-313     4-199 (307)
237 1b6c_B TGF-B superfamily recep 100.0 2.6E-33 8.9E-38  251.9  12.2  199   98-313    40-253 (342)
238 3fhr_A MAP kinase-activated pr 100.0 4.8E-33 1.6E-37  250.2  13.9  194   97-314    25-226 (336)
239 3pg1_A Mitogen-activated prote 100.0 2.4E-33 8.1E-38  254.4  11.8  199   97-314    19-231 (362)
240 2iwi_A Serine/threonine-protei 100.0 6.6E-34 2.3E-38  252.8   6.8  199   96-313    27-235 (312)
241 2j0j_A Focal adhesion kinase 1 100.0   6E-33 2.1E-37  269.9  14.1  203   95-314   385-590 (656)
242 3rgf_A Cyclin-dependent kinase 100.0 1.8E-33 6.1E-38  259.2   9.5  201   99-315    19-234 (405)
243 4e7w_A Glycogen synthase kinas 100.0 2.5E-33 8.6E-38  257.4  10.5  199   93-315    33-240 (394)
244 3a99_A Proto-oncogene serine/t 100.0 1.2E-33 4.1E-38  252.3   8.1  201   94-313    37-245 (320)
245 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-34 1.1E-38  255.5   2.6  211   94-315    27-242 (319)
246 3e3p_A Protein kinase, putativ 100.0 7.4E-33 2.5E-37  250.7  10.2  198   97-314    20-229 (360)
247 4azs_A Methyltransferase WBDD; 100.0 1.1E-32 3.7E-37  263.7   9.9  185  107-313   241-434 (569)
248 3qa8_A MGC80376 protein; kinas 100.0 4.9E-33 1.7E-37  267.8   6.6  200   98-315    12-222 (676)
249 2rio_A Serine/threonine-protei 100.0 3.1E-32 1.1E-36  253.1  11.2  204   98-315    13-239 (434)
250 3p23_A Serine/threonine-protei 100.0 5.3E-32 1.8E-36  251.3  11.1  199   97-313    21-226 (432)
251 3dzo_A Rhoptry kinase domain;  100.0 2.4E-31 8.1E-36  245.7   6.5  202   98-315    76-316 (413)
252 1zar_A RIO2 kinase; serine kin  99.9 1.5E-26   5E-31  202.8  12.9  136  101-252    91-242 (282)
253 3en9_A Glycoprotease, O-sialog  99.9 4.7E-26 1.6E-30  216.6  10.8  136  104-254   340-481 (540)
254 1zth_A RIO1 serine protein kin  99.9 3.8E-24 1.3E-28  185.0  11.0  142  101-254    48-221 (258)
255 4gyi_A RIO2 kinase; protein ki  99.8 4.9E-21 1.7E-25  172.8  12.1  139  102-254    97-267 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.6 3.6E-15 1.2E-19  128.6  10.7  143   99-253    13-215 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.5 1.2E-13   4E-18  118.5  10.8  137  100-253    20-216 (264)
258 3dxp_A Putative acyl-COA dehyd  99.4 6.6E-13 2.2E-17  119.8  12.2  143  104-254    42-251 (359)
259 3r70_A Aminoglycoside phosphot  99.2 2.8E-10 9.7E-15  100.9  12.7  138  102-257    39-243 (320)
260 3sg8_A APH(2'')-ID; antibiotic  99.1 4.3E-10 1.5E-14   98.9  10.1  135  106-254    26-226 (304)
261 3tdw_A Gentamicin resistance p  99.0 6.8E-09 2.3E-13   91.4  14.7  139  105-257    24-230 (306)
262 4gkh_A Aminoglycoside 3'-phosp  99.0 5.8E-09   2E-13   89.8  13.4  135  108-254    32-226 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.9 1.2E-08 4.3E-13   91.8  11.7   77  102-188    43-122 (362)
264 3d1u_A Putative fructosamine-3  98.8 4.2E-08 1.4E-12   85.5  11.2   77  103-187    18-97  (288)
265 2q83_A YTAA protein; 2635576,   98.6   1E-06 3.5E-11   78.1  15.6  141  105-254    37-255 (346)
266 3ats_A Putative uncharacterize  98.6 2.6E-07 8.8E-12   82.8  11.7   87  103-189    23-122 (357)
267 2olc_A MTR kinase, methylthior  98.6   2E-07 6.8E-12   84.9   9.5   79  104-185    34-120 (397)
268 3jr1_A Putative fructosamine-3  98.2 3.9E-05 1.3E-09   67.4  15.4   77  103-187    39-118 (312)
269 2ppq_A HSK, HK, homoserine kin  98.1 9.8E-06 3.3E-10   71.3   9.8  145  101-252    23-218 (322)
270 2pyw_A Uncharacterized protein  98.1 6.6E-06 2.3E-10   75.4   8.5   33  220-253   231-263 (420)
271 3dxq_A Choline/ethanolamine ki  98.0 2.4E-05 8.3E-10   68.2  10.5  137  105-254    23-205 (301)
272 3f7w_A Putative fructosamine-3  98.0 1.6E-05 5.5E-10   68.9   8.7   80  100-187    15-97  (288)
273 3csv_A Aminoglycoside phosphot  98.0 1.5E-05   5E-10   70.6   7.5  142  106-256    24-222 (333)
274 1nw1_A Choline kinase (49.2 KD  97.9 3.9E-05 1.3E-09   70.5  10.3   76  104-187    77-159 (429)
275 1zyl_A Hypothetical protein YI  97.9 0.00011 3.6E-09   64.7  11.7  142  106-255    32-227 (328)
276 3feg_A Choline/ethanolamine ki  97.9 7.5E-05 2.6E-09   67.3  10.4  146  100-253    51-256 (379)
277 3i1a_A Spectinomycin phosphotr  97.7  0.0002 6.8E-09   63.6  10.6   33  222-254   207-239 (339)
278 2qg7_A Ethanolamine kinase PV0  97.7 0.00025 8.5E-09   65.6  11.4   77  104-188   112-189 (458)
279 3c5i_A Choline kinase; choline  97.7 0.00024 8.4E-09   63.6  10.6   76  105-187    38-121 (369)
280 3f2s_A CK, chetk-alpha, cholin  97.5  0.0005 1.7E-08   62.3  10.6  149   99-252    52-281 (401)
281 3mes_A Choline kinase; malaria  97.1  0.0025 8.5E-08   58.2   9.9   77  104-187    74-157 (424)
282 3g15_A CK, chetk-alpha, cholin  96.3   0.033 1.1E-06   50.3  11.6   31  223-253   246-282 (401)
283 1cja_A Protein (actin-fragmin   92.2     1.1 3.6E-05   39.1  10.0   77  174-252   156-238 (342)
284 4ann_A ESSB; membrane protein,  91.7    0.59   2E-05   38.1   7.5   87  158-252    43-129 (215)
285 3cxl_A N-chimerin; SH2, RHO-GA  90.8   0.016 5.4E-07   53.6  -3.0   64  103-170   145-214 (463)
286 4ano_A ESSB; membrane protein,  89.9     1.1 3.8E-05   36.6   7.6   86  158-252    48-134 (219)
287 2x6h_A GH13170P, VPS34, phosph  86.3     4.1 0.00014   39.2  10.1   26  226-251   551-576 (696)
288 3ls8_A Phosphatidylinositol 3-  82.9     8.5 0.00029   36.4  10.4   26  226-251   477-502 (614)
289 2yle_A Protein spire homolog 1  80.2     1.9 6.5E-05   35.3   4.4   60  185-245    33-93  (229)
290 3hhm_A Phosphatidylinositol-4,  79.2      13 0.00046   37.6  10.9   25  226-250   937-961 (1091)
291 2y3a_A Phosphatidylinositol-4,  64.1      12  0.0004   38.1   6.5   25  226-250   940-964 (1092)
292 1e7u_A Phosphatidylinositol 3-  63.4      10 0.00035   38.0   5.9   25  226-250   804-828 (961)
293 2wxf_A Phosphatidylinositol-4,  60.3      11 0.00037   37.7   5.5   25  226-250   788-812 (940)
294 3eps_A Isocitrate dehydrogenas  53.8      34  0.0012   31.7   7.2  131  108-248   314-478 (578)
295 3oja_A Leucine-rich immune mol  24.7     2.1 7.2E-05   39.4  -5.9   28  144-171   323-350 (487)
296 3owt_C Regulatory protein SIR3  22.0      33  0.0011   16.8   0.9   13  237-249     2-14  (27)
297 4aor_D Trypsin inhibitor 3; hy  21.3      31  0.0011   18.5   0.7   15  273-287     9-23  (37)
298 2a98_A Inositol 1,4,5-trisphos  20.1 1.1E+02  0.0037   25.4   4.3   51  203-253   167-222 (259)

No 1  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=4.4e-49  Score=353.29  Aligned_cols=200  Identities=19%  Similarity=0.294  Sum_probs=170.1

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||+||+|++.. +++.||||++.+........+.+.+|+++|+.|+|||||++++++.+++.+|||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTE-DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETT-TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            4799999999999999999999887 899999999988776777788999999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      ||||+||+|.+++.......+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+.+......
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence            99999999999998766677899999999999999999999999999999999999999999999999999876543222


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..+          ..|+..||+||....     .....++|+||+|++++|+.+|.
T Consensus       182 ~~~----------~~GT~~YmAPE~l~~-----~~y~~~~DiwSlGvilyemltG~  222 (350)
T 4b9d_A          182 ARA----------CIGTPYYLSPEICEN-----KPYNNKSDIWALGCVLYELCTLK  222 (350)
T ss_dssp             HHH----------HHSCCTTCCHHHHTT-----CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccc----------cCCCccccCHHHHCC-----CCCCcHHHHHHHHHHHHHHHHCC
Confidence            122          245667888886643     33457899999999999999993


No 2  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.4e-48  Score=349.50  Aligned_cols=195  Identities=21%  Similarity=0.279  Sum_probs=168.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      ...|+++++||+|+||+||+|.+.. +|+.||||++....  ....+.+.+|+++|+.++|||||+++++|.+++.+|||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv  149 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  149 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECC-CCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4679999999999999999999887 89999999997653  23345688999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      ||||+||+|.+++.+   ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+......
T Consensus       150 mEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          150 MEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             ECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence            999999999999965   46999999999999999999999999999999999999999999999999999887654433


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..+.          .|+..||+||...     .......+|+||+|++++|+..|.
T Consensus       227 ~~~~----------~GTp~YmAPEvl~-----~~~y~~~~DiWSlGvilyeml~G~  267 (346)
T 4fih_A          227 RKSL----------VGTPYWMAPELIS-----RLPYGPEVDIWSLGIMVIEMVDGE  267 (346)
T ss_dssp             BCCC----------CSCGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccc----------ccCcCcCCHHHHC-----CCCCCcHHHHHHHHHHHHHHHHCC
Confidence            3332          3445567776543     334567899999999999999994


No 3  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.3e-48  Score=357.98  Aligned_cols=196  Identities=21%  Similarity=0.297  Sum_probs=169.9

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .+.|+++++||+|+||+||+|.+.. +|+.||||++....  ....+.+.+|+.+|+.++|||||+++++|..++.+|||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV  226 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  226 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECC-CCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence            4689999999999999999999887 89999999997653  23345688999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      ||||+||+|.+++..   ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+......
T Consensus       227 mEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          227 MEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             EECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred             EeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence            999999999999965   46999999999999999999999999999999999999999999999999999987654433


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ..+.          .|+..||+||....     ......+|+||+|++++|+.+|.|
T Consensus       304 ~~~~----------~GTp~YmAPEvl~~-----~~y~~~~DiWSlGvilyeml~G~~  345 (423)
T 4fie_A          304 RKSL----------VGTPYWMAPELISR-----LPYGPEVDIWSLGIMVIEMVDGEP  345 (423)
T ss_dssp             BCCC----------EECTTTCCHHHHTT-----CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccc----------ccCcCcCCHHHHCC-----CCCCcHHHHHHHHHHHHHHHHCCC
Confidence            3332          35566888876543     334678999999999999999943


No 4  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=3.5e-48  Score=342.11  Aligned_cols=201  Identities=29%  Similarity=0.431  Sum_probs=170.4

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ..++|++++.||+|+||+||+|++.. +++.||||++.+..... ...+.+.+|+++|+.++|||||+++++|++++.+|
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~-~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y  108 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELA-TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY  108 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECC-CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            34689999999999999999999887 89999999998764332 45678999999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      ||||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+.+....
T Consensus       109 ivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          109 FGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             EEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             EEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            999999999999999663  679999999999999999999999999999999999999999999999999998875433


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ....        .....|+..||+||..     ........+|+||+|++++|+.+|.
T Consensus       187 ~~~~--------~~~~~GTp~YmAPEvl-----~~~~y~~~~DiWSlGvilyeml~G~  231 (311)
T 4aw0_A          187 KQAR--------ANSFVGTAQYVSPELL-----TEKSACKSSDLWALGCIIYQLVAGL  231 (311)
T ss_dssp             TCCC--------BCCCCSCGGGCCHHHH-----HHSCBCHHHHHHHHHHHHHHHHHSS
T ss_pred             Cccc--------ccCcccCcccCCHHHH-----cCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            2111        0111344456666544     4444567899999999999999993


No 5  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.8e-46  Score=324.57  Aligned_cols=198  Identities=24%  Similarity=0.380  Sum_probs=156.1

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      .++|++++.||+|+||+||+|.+.. +++.||||++.+..... .....+.+|+++|+.++|||||++++++.+++.+|+
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTT-TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4789999999999999999998877 89999999998654433 445678999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+ +|+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+.......
T Consensus        91 vmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           91 VIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             EEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence            99999 78999999664  6799999999999999999999999999999999999999999999999999986543221


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      . .          ...|+..|++||......    -....+|+||+|++++|+..| .|
T Consensus       168 ~-~----------~~~GT~~Y~APE~~~~~~----y~~~~~DiwSlGvily~lltg~~P  211 (275)
T 3hyh_A          168 L-K----------TSCGSPNYAAPEVISGKL----YAGPEVDVWSCGVILYVMLCRRLP  211 (275)
T ss_dssp             ------------------CTTSCHHHHSSSS----CCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             c-C----------CeeECcccCChhhhcCCC----CCCChhhhHHHHHHHHHHHHCCCC
Confidence            1 1          124566777777654321    124678999999999999999 44


No 6  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=2.2e-45  Score=322.30  Aligned_cols=193  Identities=22%  Similarity=0.325  Sum_probs=166.9

Q ss_pred             eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe----cCEEEE
Q 042913          102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV----SHYICF  177 (317)
Q Consensus       102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~l  177 (317)
                      |++.++||+|+||+||+|.+.. +++.||+|++..........+.+.+|+++|+.++|||||+++++|..    +..+||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECC-CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            4888999999999999999887 89999999998776677777889999999999999999999999865    456899


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEc-cCCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLR-EDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~-~~~~~kl~DFG~a~~~~~  254 (317)
                      |||||+||+|.+++.+  ...+++..++.|+.||+.||.|||+++  ||||||||+||||+ .+|.+||+|||+|+....
T Consensus       107 vmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            9999999999999976  367999999999999999999999998  99999999999998 479999999999975433


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ..  ..+          ..|+..|||||.....      ...++|+||+|++++|+.+| .|
T Consensus       185 ~~--~~~----------~~GTp~YmAPE~~~~~------y~~~~DiwSlGvilyelltg~~P  228 (290)
T 3fpq_A          185 SF--AKA----------VIGTPEFMAPEMYEEK------YDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             TS--BEE----------SCSSCCCCCGGGGGTC------CCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             Cc--cCC----------cccCccccCHHHcCCC------CCcHHHHHHHHHHHHHHHHCCCC
Confidence            21  111          2567789999976432      35689999999999999999 45


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=3.7e-47  Score=335.34  Aligned_cols=203  Identities=31%  Similarity=0.481  Sum_probs=162.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++++.||+|+||+||+|+...  .+++.||||++++.........++.+|+++|+.++|||||++++++.+++
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            3455789999999999999999998742  36789999999765444333456788999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+|||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            999999999999999999763  679999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .......+.          .|+..||+||..     ........+|+||+|++++|+.+| .|
T Consensus       178 ~~~~~~~~~----------~GT~~YmAPE~~-----~~~~y~~~~DiwSlGvilyemltG~~P  225 (304)
T 3ubd_A          178 DHEKKAYSF----------CGTVEYMAPEVV-----NRRGHTQSADWWSFGVLMFEMLTGTLP  225 (304)
T ss_dssp             ---CCCCSC----------CCCGGGCCHHHH-----HTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCcccccc----------ccCcccCCHHHh-----ccCCCCCCCcccchHHHHHHHHhCCCC
Confidence            433222222          344556666654     333445789999999999999999 44


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.3e-46  Score=331.35  Aligned_cols=198  Identities=18%  Similarity=0.232  Sum_probs=162.5

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..+.|++.++||+|+||+||+|.+.. +|+.||||+++....       ..+|+.+|+.++|||||++++++.+++.+||
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~-~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQ-TGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECC-CCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            34679999999999999999999887 899999999986532       2469999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~~~~~  256 (317)
                      |||||+||+|.+++++.  +.+++..++.|+.||+.||+|||++|||||||||+||||+.+| .+||+|||+|+.+....
T Consensus       128 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             EEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            99999999999999764  6799999999999999999999999999999999999999988 69999999998775432


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .....     .......|+..||+||...     ......++|+||+|++++|+..| .|
T Consensus       206 ~~~~~-----~~~~~~~GT~~YmAPE~~~-----~~~y~~~~DiwSlGvilyemltG~~P  255 (336)
T 4g3f_A          206 LGKSL-----LTGDYIPGTETHMAPEVVM-----GKPCDAKVDIWSSCCMMLHMLNGCHP  255 (336)
T ss_dssp             -------------CCCCCCGGGCCHHHHT-----TCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccce-----ecCCccccCccccCHHHHC-----CCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence            21110     0011123555666666554     33446789999999999999999 44


No 9  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=4.1e-45  Score=322.92  Aligned_cols=205  Identities=18%  Similarity=0.238  Sum_probs=167.3

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ..+..+++++.++||+|+||+||+|.+..    .||||+++......+..+.+.+|+++|+.++|||||++++++.. +.
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~----~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~  105 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG----DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN  105 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSS----EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECC----cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce
Confidence            46778899999999999999999997653    59999998665567778899999999999999999999998764 56


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|||||||++|+|.+++... ...+++..++.|+.||+.||.|||+++||||||||+||||++++.+||+|||+|+....
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             EEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            89999999999999999654 35799999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .....        ......|+..|||||.....-.  .....++|+||.|++++|+.+| .|
T Consensus       185 ~~~~~--------~~~~~~GT~~ymAPE~l~~~~~--~~y~~ksDVwS~Gvvl~Elltg~~P  236 (307)
T 3omv_A          185 WSGSQ--------QVEQPTGSVLWMAPEVIRMQDN--NPFSFQSDVYSYGIVLYELMTGELP  236 (307)
T ss_dssp             -----------------CCCCTTSCCHHHHHCCSS--CCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCcce--------eecccccCCCccCHHHhhccCC--CCCCcHHHhHhHHHHHHHHHHCCCC
Confidence            22110        1112356678888887643211  1234689999999999999999 55


No 10 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.6e-45  Score=321.70  Aligned_cols=205  Identities=20%  Similarity=0.263  Sum_probs=169.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      .+..++|.+.++||+|+||+||+|.+..    .++..||||+++..  .....+.+.+|+++|++++|||||++++++.+
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~   86 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE   86 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            5677899999999999999999998753    25788999999754  45566789999999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQ-----------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH  240 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~-----------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~  240 (317)
                      ++.+|||||||++|+|.+++...           ....+++..++.|+.||+.||.|||+++||||||||+||||+.++.
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc
Confidence            99999999999999999999653           2357999999999999999999999999999999999999999999


Q ss_pred             EEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          241 IMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       241 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      +||+|||+|+..........+        ....++..||+||.....     ....++|+||.|.+++|+.+ | .|
T Consensus       167 ~Ki~DFGla~~~~~~~~~~~~--------~~~~gt~~ymAPE~~~~~-----~~~~k~DVwS~Gvvl~Ellt~G~~P  230 (299)
T 4asz_A          167 VKIGDFGMSRDVYSTDYYRVG--------GHTMLPIRWMPPESIMYR-----KFTTESDVWSLGVVLWEIFTYGKQP  230 (299)
T ss_dssp             EEECCCSCHHHHTGGGCEEET--------TTEEECGGGCCHHHHHHC-----CCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             EEECCcccceecCCCCceeec--------CceecChhhcCHHHHcCC-----CCCchhhHHHHHHHHHHHHcCCCCC
Confidence            999999999865443322111        112345568888876533     34578999999999999986 7 55


No 11 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=322.37  Aligned_cols=206  Identities=21%  Similarity=0.256  Sum_probs=163.9

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|.+.++||+|+||+||+|.++.    .++..||||+++..  .....+.+.+|+++|+.++|||||++++++.
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~  113 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCT  113 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            35667899999999999999999998753    25789999999754  4566678999999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQP-------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE  237 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~  237 (317)
                      +.+.+|||||||++|+|.+++....             ..++++..++.|+.||+.||.|||+++||||||||+||||+.
T Consensus       114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~  193 (329)
T 4aoj_A          114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ  193 (329)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence            9999999999999999999986532             246899999999999999999999999999999999999999


Q ss_pred             CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      ++.+||+|||+|+..........        .....++..||+||....     .....++|+||.+.+++|+.+ | .|
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~--------~~~~~gt~~ymAPE~~~~-----~~~~~~sDvwS~Gvvl~Ellt~G~~P  260 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYYRV--------GGRTMLPIRWMPPESILY-----RKFTTESDVWSFGVVLWEIFTYGKQP  260 (329)
T ss_dssp             TTEEEECCCC------------------------CCCCGGGCCHHHHTT-----CCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCcEEEcccccceeccCCCccee--------cCcccccccccChhhhcC-----CCCCccccccchHHHHHHHHcCCCCC
Confidence            99999999999987644322111        011234556777776543     334578999999999999986 7 55


No 12 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.8e-44  Score=327.60  Aligned_cols=202  Identities=19%  Similarity=0.261  Sum_probs=165.2

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe------cC
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV------SH  173 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~  173 (317)
                      ++|++++.||+|+||+||+|.+.. +|+.||||++++........+.+.+|+++|+.++|||||++++++..      .+
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~-t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRL-TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECC-CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            589999999999999999999887 89999999998766666677888999999999999999999998753      36


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+||||||| +|+|.+++..  .+.+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus       133 ~~~ivmE~~-~g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          133 SVYVVLDLM-ESDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             CEEEEEECC-SEEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEEeCC-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            799999999 5789999955  4789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ........      ......|+..|++||.....    .......|+||+|++++|+..|.|
T Consensus       210 ~~~~~~~~------~~~~~~GT~~Y~APEv~~~~----~~~~~~~DiWSlG~il~ell~G~~  261 (398)
T 4b99_A          210 TSPAEHQY------FMTEYVATRWYRAPELMLSL----HEYTQAIDLWSVGCIFGEMLARRQ  261 (398)
T ss_dssp             ------CC------CCCSSCCCCTTCCHHHHTTC----SCCCTHHHHHHHHHHHHHHHHTSC
T ss_pred             cCcccccc------ccccceeChHhcCHHHhcCC----CCCCChhheehhHHHHHHHHHCCC
Confidence            43221111      11112455566666654221    123578899999999999999954


No 13 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.8e-44  Score=317.54  Aligned_cols=207  Identities=18%  Similarity=0.252  Sum_probs=154.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC-----
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-----  173 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----  173 (317)
                      .++|++++.||+|+||+||+|.+.. +++.||||++.... .....+.+.+|+++|+.++|||||++++++...+     
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~   81 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKV-DDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL   81 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETT-TCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred             chhCEEeeEEecCCCeEEEEEEECC-CCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence            3579999999999999999999887 89999999997543 3455578899999999999999999999987544     


Q ss_pred             -------EEEEEEcccCCCChhcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEee
Q 042913          174 -------YICFLIDYCPNGDLHSLLPKQPN-NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSD  245 (317)
Q Consensus       174 -------~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~D  245 (317)
                             ++|+|||||++|+|.+++..... ...++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|
T Consensus        82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence                   47999999999999999975422 2345677889999999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCCeeecc--cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC
Q 042913          246 FDLCFQSDVVPTLVETN--VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG  312 (317)
Q Consensus       246 FG~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  312 (317)
                      ||+|+.++.........  ...........|+..|||||....     .....++|+||+|++++|+..
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~-----~~y~~~~DiwSlGvilyell~  225 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-----NSYSHKVDIFSLGLILFELLY  225 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTT-----CCCCTHHHHHHHHHHHHHHHS
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcC-----CCCCCHHHHHHHHHHHHHHcc
Confidence            99998876543321111  111111222346666777776543     344678999999999999875


No 14 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.2e-43  Score=314.53  Aligned_cols=207  Identities=18%  Similarity=0.261  Sum_probs=167.7

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+...++++.++||+|+||+||+|.+..    .+++.||||+++... .....+.+.+|+.++++++|||||+++|++.
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            35677889999999999999999998742    256889999997543 3344578999999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR  236 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~  236 (317)
                      .++.++||||||++|+|.++|....              ...+++..++.|+.||+.||.|||+++||||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            9999999999999999999985431              24589999999999999999999999999999999999999


Q ss_pred             cCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-C
Q 042913          237 EDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-V  314 (317)
Q Consensus       237 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~  314 (317)
                      +++.+||+|||+|+.........        ......++..||+||.....     .....+|+||.|.+++|+.+ | .
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~--------~~~~~~gt~~ymAPE~l~~~-----~~s~ksDVwSfGvvl~El~t~g~~  246 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYK--------LLGNSLLPIRWMAPEAIMYG-----KFSIDSDIWSYGVVLWEVFSYGLQ  246 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBC--------SSSSSCBCGGGCCHHHHHHC-----CCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCCEEECCcccceeccCCCcee--------EecccccCCcccCHHHHhCC-----CCCccchhhhHHHHHHHHHhCCCC
Confidence            99999999999998654322110        01112445567888766433     34678999999999999986 7 4


Q ss_pred             C
Q 042913          315 P  315 (317)
Q Consensus       315 p  315 (317)
                      |
T Consensus       247 P  247 (308)
T 4gt4_A          247 P  247 (308)
T ss_dssp             T
T ss_pred             C
Confidence            5


No 15 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.1e-42  Score=330.92  Aligned_cols=202  Identities=28%  Similarity=0.443  Sum_probs=166.9

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLDHPFLPTLYAHL  169 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~  169 (317)
                      ...+..++|++++.||+|+||+||+|+... +|+.||||++.+.....    ......++++.+++.++|||||+++++|
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~-tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f  261 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKAD-TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF  261 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECC-CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE
Confidence            456778999999999999999999999887 89999999998654322    2223334456667778899999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      .+.+.+|||||||+||+|.+++.+.  +.+++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||+|
T Consensus       262 ~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          262 HTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA  339 (689)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEeccccee
Confidence            9999999999999999999999763  67999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +.+.....  .+          ..|+..|||||....    .......+|+|++|++++|+..|.
T Consensus       340 ~~~~~~~~--~t----------~~GTp~YmAPEvl~~----~~~y~~~vDiWSLGvilYEmLtG~  388 (689)
T 3v5w_A          340 CDFSKKKP--HA----------SVGTHGYMAPEVLQK----GVAYDSSADWFSLGCMLFKLLRGH  388 (689)
T ss_dssp             EECSSCCC--CS----------CCSCGGGCCHHHHST----TCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eecCCCCC--CC----------ccCCcCccCHHHHhC----CCCCCcHHHHHHHHHHHHHHHhCC
Confidence            87654321  11          134455666665421    233467899999999999999994


No 16 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.5e-42  Score=307.43  Aligned_cols=202  Identities=19%  Similarity=0.263  Sum_probs=160.0

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC----E
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH----Y  174 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~  174 (317)
                      .++|.+.++||+|+||+||+|.+.   |+.||||++.....   .......|+..+..++|||||++++++..++    .
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~~---g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEET---TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEEC---CEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence            367999999999999999999874   68999999975421   1122344666667889999999999997654    6


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeccCCCCcEEEccCCcEEEeee
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL--------GIIYRDLKPENILLREDGHIMLSDF  246 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------~ivHrDikp~Nill~~~~~~kl~DF  246 (317)
                      +|||||||++|+|.++++.   ..+++..+..++.|++.||.|||++        +||||||||+||||+.++.+||+||
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF  152 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence            8999999999999999975   4589999999999999999999987        8999999999999999999999999


Q ss_pred             cccccCCCCCCeeecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCCCCC
Q 042913          247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      |+|+...........      ......++..||+||...+.... ......++|+||.|++++|+.+|.|
T Consensus       153 Gla~~~~~~~~~~~~------~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~  216 (303)
T 3hmm_A          153 GLAVRHDSATDTIDI------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS  216 (303)
T ss_dssp             TTCEEEETTTTEESC------C-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred             CCCccccCCCCceee------ecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCC
Confidence            999876544332211      11123577789999987654322 2234568999999999999988843


No 17 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=8.4e-42  Score=307.80  Aligned_cols=206  Identities=20%  Similarity=0.272  Sum_probs=168.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC-CCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH-PFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~  170 (317)
                      .+..++|++++.||+|+||+||+|.+...    .++.||||.+.... .....+.+.+|+++|+.+.| ||||+++++|.
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            56778999999999999999999987641    34679999997653 34556789999999999975 89999999986


Q ss_pred             e-cCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE
Q 042913          171 V-SHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL  235 (317)
Q Consensus       171 ~-~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill  235 (317)
                      . ++.+|+|||||++|+|.++|+...              ...+++..++.++.||+.||+|||+++||||||||+|||+
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl  218 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  218 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence            5 457899999999999999996532              2458999999999999999999999999999999999999


Q ss_pred             ccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-
Q 042913          236 REDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-  313 (317)
Q Consensus       236 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-  313 (317)
                      ++++.+||+|||+|+.+........+        ....++..|||||.....     .....+|+||.|++++|+.. | 
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~~~~~~--------~~~~gt~~ymAPE~l~~~-----~y~~ksDVwS~Gv~l~El~t~G~  285 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDPDYVRK--------GDARLPLKWMAPETIFDR-----VYTIQSDVWSFGVLLWEIFSLGA  285 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEE--------TTEEECGGGCCHHHHHHC-----CCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             CCCCCEEECcchhhhhcccCCCceee--------ccccccccccCHHHHhcC-----CCCCcccEeehHHHHHHHHhCCC
Confidence            99999999999999877554432211        112345678888876543     34578999999999999986 7 


Q ss_pred             CC
Q 042913          314 VP  315 (317)
Q Consensus       314 ~p  315 (317)
                      .|
T Consensus       286 ~P  287 (353)
T 4ase_A          286 SP  287 (353)
T ss_dssp             CS
T ss_pred             CC
Confidence            44


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.8e-41  Score=323.25  Aligned_cols=198  Identities=24%  Similarity=0.316  Sum_probs=168.5

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||+||+|.++. +|+.||+|++...  .....+.+.+|+++|+.++|||||+++++|.+.+.+||
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~-tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECC-CCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            35799999999999999999999887 8999999999765  34445678999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC--CcEEEeeecccccCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED--GHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~--~~~kl~DFG~a~~~~~~  255 (317)
                      |||||+||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+  +.+||+|||+|+.+...
T Consensus       232 v~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          232 IYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             EEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             EEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            99999999999998643 3579999999999999999999999999999999999999854  89999999999987654


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ... .+.          .|+..|++||..     .........|+||+|++++|+..|.|
T Consensus       311 ~~~-~~~----------~GT~~y~APEv~-----~~~~y~~~~DiWSlGvilyeml~G~~  354 (573)
T 3uto_A          311 QSV-KVT----------TGTAEFAAPEVA-----EGKPVGYYTDMWSVGVLSYILLSGLS  354 (573)
T ss_dssp             SEE-EEE----------CSSGGGCCHHHH-----TTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             Cce-eee----------EECccccCHHHh-----CCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            322 111          234456666654     33445678999999999999999943


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.6e-41  Score=307.50  Aligned_cols=204  Identities=18%  Similarity=0.230  Sum_probs=160.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  175 (317)
                      .++|++.+.||+|+||+||+|.++.  .+++.||+|.+....    ...++.+|+++|+.+ +||||++++++|...+++
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            4689999999999999999998752  357899999986542    234578899999998 599999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeecccccCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDFDLCFQSDV  254 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DFG~a~~~~~  254 (317)
                      |+||||+++|+|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus        96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999999983     48999999999999999999999999999999999999876 7999999999987655


Q ss_pred             CCCeeecccc------------------cccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC-C
Q 042913          255 VPTLVETNVG------------------SATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG-V  314 (317)
Q Consensus       255 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G-~  314 (317)
                      ..........                  .........|+..|++||..     ... ......|+||+|++++|+..| .
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-----~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL-----TKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHH-----TTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHH-----cCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            4322111110                  00111122344555555543     322 346788999999999999999 5


Q ss_pred             CC
Q 042913          315 PR  316 (317)
Q Consensus       315 p~  316 (317)
                      |.
T Consensus       246 Pf  247 (361)
T 4f9c_A          246 PF  247 (361)
T ss_dssp             SS
T ss_pred             CC
Confidence            63


No 20 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=7.4e-39  Score=287.13  Aligned_cols=200  Identities=23%  Similarity=0.345  Sum_probs=171.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .....++|++++.||+|+||.||+|.+.. +++.||||++..........+.+.+|+++++.++||||+++++++...+.
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   88 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT   88 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence            34567899999999999999999999877 79999999998876677777889999999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|+||||+++++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             EEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            99999999999999999653  6699999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceecc-chhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAE-PRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....           ....++..|++||...     .... ....|+|++|++++|+.+|
T Consensus       167 ~~~~-----------~~~~gt~~y~aPE~~~-----~~~~~~~~~DiwslG~il~ell~g  210 (328)
T 3fe3_A          167 GGKL-----------DAFCGAPPYAAPELFQ-----GKKYDGPEVDVWSLGVILYTLVSG  210 (328)
T ss_dssp             SCGG-----------GTTSSSGGGCCHHHHH-----TCCCCSHHHHHHHHHHHHHHHHHS
T ss_pred             CCcc-----------ccccCCcceeCccccc-----CCCcCCchhhhhhhHHHHHHHHhC
Confidence            3211           1123445566666543     2222 4689999999999999999


No 21 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.1e-38  Score=288.86  Aligned_cols=202  Identities=29%  Similarity=0.512  Sum_probs=164.3

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++++.||+|+||+||+|++.. +++.||||++.+... .......+.+|..+++.+ +||||+++++++...
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVKE-TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP   96 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEcC-CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence            35677899999999999999999999887 889999999987533 234556788999999988 699999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +.+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999999999999653  67999999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ........+.          .++..|++||.     ..........|+|+++++++|+..|.
T Consensus       175 ~~~~~~~~~~----------~gt~~y~aPE~-----~~~~~~~~~~DiwslG~il~ell~G~  221 (353)
T 3txo_A          175 ICNGVTTATF----------CGTPDYIAPEI-----LQEMLYGPAVDWWAMGVLLYEMLCGH  221 (353)
T ss_dssp             CC-------------------CCGGGCCHHH-----HHHHHCTTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCcccccc----------CCCcCeEChhh-----cCCCCcCCccCCCcchHHHHHHHhCC
Confidence            4332221111          23344555554     44444567899999999999999993


No 22 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=2.5e-38  Score=284.70  Aligned_cols=200  Identities=27%  Similarity=0.488  Sum_probs=168.9

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      +..++|++++.||+|+||+||+|.... +++.||+|++.+.... ......+.+|+++++.++||||+++++++...+.+
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   80 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEE
Confidence            456899999999999999999999877 8999999999875332 24456788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |+||||+++|+|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.....
T Consensus        81 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            999999999999999865  367999999999999999999999999999999999999999999999999999864332


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....+          ..++..|++||...     ........|+|++|++++|+..|.
T Consensus       159 ~~~~~~----------~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  202 (337)
T 1o6l_A          159 GATMKT----------FCGTPEYLAPEVLE-----DNDYGRAVDWWGLGVVMYEMMCGR  202 (337)
T ss_dssp             TCCBCC----------CEECGGGCCGGGGS-----SSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCcccc----------cccChhhCChhhhc-----CCCCCchhhcccchhHHHHHhcCC
Confidence            221111          13445566666553     334567899999999999999993


No 23 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=9.6e-39  Score=296.51  Aligned_cols=208  Identities=24%  Similarity=0.360  Sum_probs=170.9

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .+..++|++++.||+|+||+||+|.+.. +++.||+|++.+..... .....+.+|+.++..++||||+++++++.+.+.
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~  148 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN  148 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcC-CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence            4556899999999999999999999887 78999999997643222 223347889999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|+||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+....
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~  227 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  227 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence            99999999999999999653 46799999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ......         ....++..|++||................|+|++|++++|+..|.
T Consensus       228 ~~~~~~---------~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~  278 (437)
T 4aw2_A          228 DGTVQS---------SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE  278 (437)
T ss_dssp             TSCEEC---------CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCccc---------ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence            433211         112455567777765421111223457899999999999999993


No 24 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.2e-38  Score=290.52  Aligned_cols=202  Identities=29%  Similarity=0.478  Sum_probs=167.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSML-DHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++++.||+|+||+||+|++.. +++.||+|++.+..... ...+.+.+|..+++.+ +||||+++++++...
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKK-TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            35667899999999999999999999887 88999999998764433 4456688899999887 799999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +.+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999999999999653  67999999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ........+          ..++..|++||..     .........|+|++|++++|+..|.
T Consensus       204 ~~~~~~~~~----------~~gt~~Y~aPE~l-----~~~~~~~~~DiwslGvllyell~G~  250 (396)
T 4dc2_A          204 LRPGDTTST----------FCGTPNYIAPEIL-----RGEDYGFSVDWWALGVLMFEMMAGR  250 (396)
T ss_dssp             CCTTCCBCC----------CCBCGGGCCHHHH-----TTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCcccc----------ccCCcccCCchhh-----cCCCCChHHHHHHHHHHHHHHHhCC
Confidence            332221111          1334456666654     3344568899999999999999994


No 25 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=5e-38  Score=287.11  Aligned_cols=205  Identities=25%  Similarity=0.427  Sum_probs=172.5

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      ..+.+..++|++++.||+|+||.||+|.+.. +++.||+|++.+..... .....+.+|+++++.++||||+++++++..
T Consensus         8 ~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~   86 (384)
T 4fr4_A            8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKND-TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD   86 (384)
T ss_dssp             CCCCCCGGGEEEEEEEECCTTCCEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CCCCCChHHeEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            3456788999999999999999999999887 88999999997654222 445678899999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+.+|+||||+.+|+|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           87 EEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence            9999999999999999999965  46799999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .......           ....++..|++||.....  .........|+|++|++++|+..|
T Consensus       165 ~~~~~~~-----------~~~~gt~~Y~aPE~~~~~--~~~~~~~~~DiwSlG~il~elltG  213 (384)
T 4fr4_A          165 LPRETQI-----------TTMAGTKPYMAPEMFSSR--KGAGYSFAVDWWSLGVTAYELLRG  213 (384)
T ss_dssp             CCTTCCB-----------CCCCSCGGGCCGGGTCCC--SSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             ccCCCce-----------eccCCCccccCCeeeccC--CCCCCCccceeechHHHHHHHHhC
Confidence            6432211           112345567777765321  122346789999999999999999


No 26 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=6.4e-38  Score=282.96  Aligned_cols=201  Identities=29%  Similarity=0.477  Sum_probs=169.7

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++++.||+|+||.||+|++.. +++.||+|++.+... .....+.+.+|+.+++.+ +||||+++++++...+
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKK-TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES   83 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECC-CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC
Confidence            4567899999999999999999999887 789999999987643 345667789999999987 8999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            999999999999999999653  569999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .......          ...++..|++||...     ........|+|++|++++|+..|.
T Consensus       162 ~~~~~~~----------~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  207 (345)
T 3a8x_A          162 RPGDTTS----------TFCGTPNYIAPEILR-----GEDYGFSVDWWALGVLMFEMMAGR  207 (345)
T ss_dssp             CTTCCBC----------CCCSCGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCccc----------ccCCCccccCccccC-----CCCCChHHhHHHHHHHHHHHHhCC
Confidence            3221111          113444566666543     334567899999999999999994


No 27 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-38  Score=280.82  Aligned_cols=197  Identities=33%  Similarity=0.539  Sum_probs=168.5

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      +..++|++++.||+|+||.||+|.... +++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRH-NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence            456899999999999999999999877 79999999998754322 3456788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.....
T Consensus        82 ~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            9999999999999999663  67999999999999999999999999999999999999999999999999999865431


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .             ....++..|++||...     ........|+|++|++++|+..|.
T Consensus       160 ~-------------~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  200 (318)
T 1fot_A          160 T-------------YTLCGTPDYIAPEVVS-----TKPYNKSIDWWSFGILIYEMLAGY  200 (318)
T ss_dssp             B-------------CCCCSCTTTCCHHHHT-----TCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             c-------------ccccCCccccCHhHhc-----CCCCCcccchhhhHHHHHHHHhCC
Confidence            1             1123455677776553     334467899999999999999993


No 28 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.7e-38  Score=291.27  Aligned_cols=205  Identities=23%  Similarity=0.414  Sum_probs=168.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .+..++|++++.||+|+||+||+|.+.. +++.||+|++.+..... .....+.+|+.+++.++||||+++++++.+.+.
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~-~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~  143 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKS-TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  143 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECC-CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            4567899999999999999999999887 78999999997643221 223457889999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|+||||++||+|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus       144 ~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~  220 (410)
T 3v8s_A          144 LYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  220 (410)
T ss_dssp             EEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence            9999999999999999965   4589999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....         .....++..|++||........ .......|+|++|++++|+..|.
T Consensus       221 ~~~~~---------~~~~~gt~~Y~APE~l~~~~~~-~~~~~~~DiwSlGvilyell~G~  270 (410)
T 3v8s_A          221 EGMVR---------CDTAVGTPDYISPEVLKSQGGD-GYYGRECDWWSVGVFLYEMLVGD  270 (410)
T ss_dssp             TSEEE---------CCSCCSCGGGCCHHHHHTTTTT-CEEETHHHHHHHHHHHHHHHHSS
T ss_pred             CCccc---------ccCCcCCccccCHHHhhccCCC-cCCCCcceEecchHHHHHHHhCC
Confidence            33211         1112345566666655322111 11457899999999999999993


No 29 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=7.2e-38  Score=282.48  Aligned_cols=201  Identities=29%  Similarity=0.519  Sum_probs=166.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++.+.||+|+||.||+|.+.. +++.||||++++.... ......+..|..+++.+ +||||+++++++...+
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            5677899999999999999999999887 8999999999875322 23456678899999876 8999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  169 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  169 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence            999999999999999999653  569999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .......          ...++..|++||...     ........|+|++|++++|+..|.
T Consensus       170 ~~~~~~~----------~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  215 (345)
T 1xjd_A          170 LGDAKTN----------TFCGTPDYIAPEILL-----GQKYNHSVDWWSFGVLLYEMLIGQ  215 (345)
T ss_dssp             CTTCCBC----------CCCSCGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCccc----------CCCCCcccCChhhhc-----CCCCCChhhhHHHHHHHHHHhcCC
Confidence            3222111          113344566666543     334568899999999999999994


No 30 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=5.9e-38  Score=277.00  Aligned_cols=202  Identities=19%  Similarity=0.244  Sum_probs=168.0

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      +.+..++|++++.||+|+||.||+|.+.. +++.||+|++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~   84 (294)
T 4eqm_A            6 GKIINERYKIVDKLGGGGMSTVYLAEDTI-LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD   84 (294)
T ss_dssp             SSCEETTEEEEEEEEEETTEEEEEEEETT-TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS
T ss_pred             hhHhhccEEEEEEEccCCCEEEEEEEECC-CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC
Confidence            56677899999999999999999999877 78999999986532 23456678999999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        85 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           85 CYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             eEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999999999999654  579999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....         ......++..|++||....     .....+.|+|+++++++|+..|
T Consensus       163 ~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~~l~~ll~g  208 (294)
T 4eqm_A          163 ETSLT---------QTNHVLGTVQYFSPEQAKG-----EATDECTDIYSIGIVLYEMLVG  208 (294)
T ss_dssp             ---------------------CCSSCCHHHHHT-----CCCCTTHHHHHHHHHHHHHHHS
T ss_pred             ccccc---------ccCccccCccccCHhHhcC-----CCCCchHhHHHHHHHHHHHHhC
Confidence            33211         1111235566777776543     3345788999999999999998


No 31 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=5e-38  Score=284.36  Aligned_cols=203  Identities=25%  Similarity=0.454  Sum_probs=166.4

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSML-DHPFLPTLYAHLEV  171 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  171 (317)
                      ...+..++|++++.||+|+||.||+|.... +++.||||++.+..... ...+.+.+|..++..+ +||||+++++++..
T Consensus        14 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT   92 (353)
T ss_dssp             -----CTTEEEEEEEEEETTEEEEEEEETT-EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC
T ss_pred             cCCCchHHcEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc
Confidence            345778999999999999999999999876 78999999998754322 3456788899999887 79999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+.+|+||||++||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999999999999653  5699999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .........+          ..++..|++||..     .........|+|++|++++|+..|.
T Consensus       171 ~~~~~~~~~~----------~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~ell~G~  218 (353)
T 2i0e_A          171 NIWDGVTTKT----------FCGTPDYIAPEII-----AYQPYGKSVDWWAFGVLLYEMLAGQ  218 (353)
T ss_dssp             CCCTTCCBCC----------CCSCGGGCCHHHH-----TTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCccccc----------ccCCccccChhhh-----cCCCcCCcccccchHHHHHHHHcCC
Confidence            4332221111          1334455666554     3344568899999999999999994


No 32 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=9.8e-38  Score=276.03  Aligned_cols=195  Identities=19%  Similarity=0.247  Sum_probs=165.9

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++.....  ...+.+.+|+.+++.++||||+++++++...+.+|+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   94 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   94 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTT-TCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECC-CCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence            45789999999999999999998776 789999999976532  234568899999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+++++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus        95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            9999999999999965   3589999999999999999999999999999999999999999999999999987654332


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...          ...++..|++||..     .........|+|++|++++|+..|
T Consensus       172 ~~~----------~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~ell~g  212 (297)
T 3fxz_A          172 KRS----------TMVGTPYWMAPEVV-----TRKAYGPKVDIWSLGIMAIEMIEG  212 (297)
T ss_dssp             CBC----------CCCSCGGGCCHHHH-----HCSCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccC----------CccCCcCccChhhh-----cCCCCCcHHHHHHHHHHHHHHHhC
Confidence            211          12344456666654     333456789999999999999998


No 33 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.9e-38  Score=283.17  Aligned_cols=200  Identities=26%  Similarity=0.382  Sum_probs=162.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ....++|++.+.||+|+||+||+|.+.. +++.||||++...... .....+.+|+++++.++||||+++++++...+.+
T Consensus         6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   83 (347)
T 3zgw_A            6 DELLKYYELHETIGTGGFAKVKLACHIL-TGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKI   83 (347)
T ss_dssp             TTTTTTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             HHHhcCeEEEEEEEcCCCeEEEEEEECC-CCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence            3456899999999999999999999877 8999999999765432 3346788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|......
T Consensus        84 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  161 (347)
T 3zgw_A           84 FMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN  161 (347)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence            9999999999999999653  56999999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceec-cchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVA-EPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....         .....++..|++||....     .. .....|+|++|++++|+.+|
T Consensus       162 ~~~~---------~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~ell~g  206 (347)
T 3zgw_A          162 KDYH---------LQTCCGSLAYAAPELIQG-----KSYLGSEADVWSMGILLYVLMCG  206 (347)
T ss_dssp             -------------------CGGGCCHHHHTT-----C---CCHHHHHHHHHHHHHHHHS
T ss_pred             CCcc---------ccccCCccCccCHHHHcC-----CCCCCcHhHHHHHHHHHHHHHHC
Confidence            2110         011134455666665432     22 25678999999999999999


No 34 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.9e-38  Score=288.76  Aligned_cols=208  Identities=24%  Similarity=0.373  Sum_probs=171.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .+..++|++++.||+|+||+||+|+... +++.||+|++.+.... ......+.+|+.++..++||||+++++++.+.+.
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~-~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~  135 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQ-TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY  135 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence            4567899999999999999999999877 8999999999764322 2334568899999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|+||||+++|+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus       136 ~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          136 LYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence            99999999999999999653 24699999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccc--cceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENV--MEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ......         ....++..|++||......  ..........|+|++|++++|+..|.
T Consensus       215 ~~~~~~---------~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~  267 (412)
T 2vd5_A          215 DGTVRS---------LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ  267 (412)
T ss_dssp             TSCEEC---------SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccc---------ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCC
Confidence            332111         1124555677777654210  01223467899999999999999993


No 35 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=275.11  Aligned_cols=210  Identities=20%  Similarity=0.251  Sum_probs=169.0

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++.+.||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+++++.++||||+++++++..++..
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~-~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   82 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVTHRE-TGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL   82 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             eeChhHeeccceecCCCCEEEEEEEECC-CCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCee
Confidence            4567899999999999999999999887 7899999988553  456667899999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        83 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             EEEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            9999999999999999764 466999999999999999999999999999999999999999999999999999876544


Q ss_pred             CCeeecccc----cccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          256 PTLVETNVG----SATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       256 ~~~~~~~~~----~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .........    .........++..|++||..     .......+.|+|+++++++|+..|.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Di~slG~~l~el~~g~  219 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI-----NGRSYDEKVDVFSFGIVLCEIIGRV  219 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHH-----TTCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             cccccccccccccccccccccCCCcceeCHHHh-----cCCCCCcHHHHHHHHHHHHHHhcCC
Confidence            332211110    00111122344556666654     3344567899999999999998874


No 36 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.1e-37  Score=286.92  Aligned_cols=194  Identities=18%  Similarity=0.244  Sum_probs=155.4

Q ss_pred             cccCCeEEe-eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHH-HhcCCCCcceEEEEEEe---
Q 042913           97 LHLRHLKLV-RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEIL-SMLDHPFLPTLYAHLEV---  171 (317)
Q Consensus        97 ~~~~~y~i~-~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~---  171 (317)
                      ...++|.+. +.||+|+||+||+|.+.. +++.||||++...       ..+.+|++++ +..+||||+++++++..   
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~-~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~  129 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYA  129 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             cccccceeccceeeeccCeEEEEEEECC-CCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence            345678777 789999999999999877 8999999999643       3466788887 45589999999999875   


Q ss_pred             -cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeec
Q 042913          172 -SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFD  247 (317)
Q Consensus       172 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG  247 (317)
                       ...+|+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||
T Consensus       130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence             667999999999999999997765567999999999999999999999999999999999999997   7899999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +|+........           ....++..|++||....     .......|+|++|++++|+..|.
T Consensus       210 ~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g~  260 (400)
T 1nxk_A          210 FAKETTSHNSL-----------TTPCYTPYYVAPEVLGP-----EKYDKSCDMWSLGVIMYILLCGY  260 (400)
T ss_dssp             TCEECC----------------------CTTCCGGGSCC-----CCSSSHHHHHHHHHHHHHHHHSS
T ss_pred             cccccCCCCcc-----------ccCCCCCCccCHhhcCC-----CCCCCcccHHHHHHHHHHHHhCC
Confidence            99865432211           11234566888887643     23457899999999999999993


No 37 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.2e-37  Score=281.75  Aligned_cols=201  Identities=27%  Similarity=0.464  Sum_probs=171.5

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      .......++|++++.||+|+||.||+|.+.. +++.||+|++.+..... ...+.+.+|+++++.++||||+++++++.+
T Consensus        34 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  112 (350)
T 1rdq_E           34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE-SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD  112 (350)
T ss_dssp             CCCCCCGGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cccCCCHHHCEEEEEeecCcCcEEEEEEECC-CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            4456778999999999999999999999887 79999999997654322 445678899999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+.+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus       113 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          113 NSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccccee
Confidence            99999999999999999999653  5699999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....             ....++..|++||...     ........|+|++|++++|+..|.
T Consensus       191 ~~~~~-------------~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  235 (350)
T 1rdq_E          191 VKGRT-------------WTLCGTPEALAPEIIL-----SKGYNKAVDWWALGVLIYEMAAGY  235 (350)
T ss_dssp             CSSCB-------------CCCEECGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCc-------------ccccCCccccCHHHhc-----CCCCCCcCCEecccHhHhHHhhCC
Confidence            54321             1113445566666554     334567899999999999999994


No 38 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.8e-37  Score=282.65  Aligned_cols=205  Identities=19%  Similarity=0.268  Sum_probs=167.6

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYA  167 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  167 (317)
                      ..+..++|++++.||+|+||.||+|.+..      .++..||||++.... .....+.+.+|+.+++.+ +||||+++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            35667899999999999999999998742      245679999997653 456677899999999999 8999999999


Q ss_pred             EEEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913          168 HLEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI  233 (317)
Q Consensus       168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni  233 (317)
                      ++...+.+|+||||+++|+|.+++....              ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            9999999999999999999999987542              24588999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-
Q 042913          234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-  312 (317)
Q Consensus       234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-  312 (317)
                      |++.++.+||+|||+|+...........        ....++..|++||...     ........|+|++|++++|+.. 
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~--------~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslG~il~ellt~  301 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDYYKKT--------TNGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTL  301 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCTTCTT--------TTTTSCGGGCCHHHHH-----TCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCCCEEEccccCCcccCcccceecc--------cCCCcccceECHhHhc-----CCCCCcHHHHHHHHHHHHHHHcC
Confidence            9999999999999999866543221111        1112233466666553     3345678999999999999987 


Q ss_pred             C
Q 042913          313 G  313 (317)
Q Consensus       313 G  313 (317)
                      |
T Consensus       302 g  302 (370)
T 2psq_A          302 G  302 (370)
T ss_dssp             S
T ss_pred             C
Confidence            6


No 39 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=3e-37  Score=280.35  Aligned_cols=199  Identities=22%  Similarity=0.312  Sum_probs=170.4

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+.+++.++||||+++++++...+..|
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  104 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY  104 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECC-CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            345789999999999999999998877 7899999999877666677788999999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeecccccCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED---GHIMLSDFDLCFQSD  253 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~---~~~kl~DFG~a~~~~  253 (317)
                      +||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+|||+|+...
T Consensus       105 lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          105 LVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EEECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            99999999999999855  3678999999999999999999999999999999999999864   459999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....           ....++..|++||....     .......|+|++|++++|+..|.
T Consensus       183 ~~~~~-----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~ll~g~  227 (362)
T 2bdw_A          183 DSEAW-----------HGFAGTPGYLSPEVLKK-----DPYSKPVDIWACGVILYILLVGY  227 (362)
T ss_dssp             TCCSC-----------CCSCSCTTTCCHHHHTT-----CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCccc-----------ccCCCCccccCHHHHcc-----CCCCchhhHHHHHHHHHHHHHCC
Confidence            33211           11245566777776543     23457899999999999999994


No 40 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=7.3e-38  Score=285.26  Aligned_cols=201  Identities=29%  Similarity=0.467  Sum_probs=159.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHH-HHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEI-LSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++++.||+|+||+||+|++.. +++.||||++.+..... .....+.+|..+ ++.++||||+++++++...+
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHKA-EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEETT-TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEcC-CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC
Confidence            4567899999999999999999999887 78999999998765432 344566777776 57789999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++|+|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            99999999999999999965  3678999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .......          ...++..|++||...     ........|+|++|++++|+..|.
T Consensus       191 ~~~~~~~----------~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~G~  236 (373)
T 2r5t_A          191 EHNSTTS----------TFCGTPEYLAPEVLH-----KQPYDRTVDWWCLGAVLYEMLYGL  236 (373)
T ss_dssp             CCCCCCC----------SBSCCCCCCCHHHHT-----TCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCccc----------cccCCccccCHHHhC-----CCCCCchhhhHHHHHHHHHHHcCC
Confidence            2221111          123445566666543     334567899999999999999994


No 41 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=4.6e-37  Score=281.65  Aligned_cols=212  Identities=17%  Similarity=0.213  Sum_probs=176.2

Q ss_pred             ccccCCeEEeeeeccc--CCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTG--NLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G--~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ....++|++++.||+|  +||.||+|.+.. +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus        21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   99 (389)
T 3gni_B           21 LPEGGCYELLTVIGKGFEDLMTVNLARYKP-TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN   99 (389)
T ss_dssp             CCCGGGEEEEEEEEEETTTTEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cCCCCcEEEEecccCCcCCceEEEEEEEcC-CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC
Confidence            3456899999999999  999999999887 7999999999887666777788999999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence            99999999999999999987656779999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..........   .......++..|++||....+.   .......|+|++|++++|+..|.
T Consensus       180 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~DiwslG~il~el~~g~  234 (389)
T 3gni_B          180 SHGQRQRVVH---DFPKYSVKVLPWLSPEVLQQNL---QGYDAKSDIYSVGITACELANGH  234 (389)
T ss_dssp             ETTEECSCBC---CCCTTCTTTGGGSCHHHHSTTS---SCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccc---cccccccccccccCHHHHhccC---CCCCcHhHHHHHHHHHHHHHHCC
Confidence            3221111000   1111224455577777665432   23456899999999999999983


No 42 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.8e-37  Score=281.51  Aligned_cols=198  Identities=23%  Similarity=0.311  Sum_probs=165.7

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++.+.....    ...+.+.+|+.+++.++||||+++++++...+
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECC-CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            35789999999999999999999887 89999999997653221    13467889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeeccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG----HIMLSDFDLC  249 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~----~~kl~DFG~a  249 (317)
                      .+|+||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+|
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           89 DVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            99999999999999999955  46799999999999999999999999999999999999998776    7999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +........           ....++..|++||.     ..........|+|++|++++|+..|.
T Consensus       167 ~~~~~~~~~-----------~~~~gt~~y~aPE~-----~~~~~~~~~~DiwslGvil~~ll~g~  215 (361)
T 2yab_A          167 HEIEDGVEF-----------KNIFGTPEFVAPEI-----VNYEPLGLEADMWSIGVITYILLSGA  215 (361)
T ss_dssp             EECCTTCCC-----------CCCCSCGGGCCHHH-----HTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             eEcCCCCcc-----------ccCCCCccEECchH-----HcCCCCCccccHHHHHHHHHHHHhCC
Confidence            876543211           11123444555554     44444567899999999999999994


No 43 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2e-37  Score=290.11  Aligned_cols=207  Identities=16%  Similarity=0.166  Sum_probs=156.1

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-----cC
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-----SH  173 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~  173 (317)
                      .++|++++.||+|+||+||+|.+.. +++.||||++..........+++.+|+++|+.++||||+++++++..     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKL-EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC---CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECC-CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            4789999999999999999999887 78999999997766566777889999999999999999999999843     35


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+ +++|.+++..  ...+++..++.++.||+.||+|||+.||+||||||+||||+.++.+||+|||+|+...
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          131 ELYVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CEEEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             eEEEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            799999998 7899999865  4679999999999999999999999999999999999999999999999999998775


Q ss_pred             CCCCeeeccc--------------cc---ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNV--------------GS---ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~--------------~~---~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ..........              .+   ........++..|++||...    .........|+|++|++++|+..|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL----LQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             SCTTCCCCCC---------------------------CCCTTCCHHHHT----TCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             CccccccccccCccccccccccccccccccccccCCcccccccChHHhh----CCCCCCcHhHHHHHHHHHHHHHHh
Confidence            4322111000              00   00111223455566666431    223356789999999999999974


No 44 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=3.1e-37  Score=287.12  Aligned_cols=200  Identities=20%  Similarity=0.258  Sum_probs=168.7

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++||||+++++++...+..|+
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVL-AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETT-TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECC-CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            45789999999999999999998877 89999999998776666667789999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc---cCCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR---EDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~---~~~~~kl~DFG~a~~~~~  254 (317)
                      ||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|+....
T Consensus        88 v~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             EECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999999999998664  6699999999999999999999999999999999999998   467899999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ......          ...++..|++||...     .......+|+|++|++++|+..|.|
T Consensus       166 ~~~~~~----------~~~gt~~Y~APE~l~-----~~~~~~~~DIwSlGvilyell~G~~  211 (444)
T 3soa_A          166 EQQAWF----------GFAGTPGYLSPEVLR-----KDPYGKPVDLWACGVILYILLVGYP  211 (444)
T ss_dssp             TCCBCC----------CSCSCGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCceee----------cccCCcccCCHHHhc-----CCCCCCccccHHHHHHHHHHHhCCC
Confidence            332211          123445566666543     3345678999999999999999943


No 45 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-37  Score=275.26  Aligned_cols=195  Identities=15%  Similarity=0.218  Sum_probs=164.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||+|++...   ......+.+|+.+++.++||||+++++++...+.+++|
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   79 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECC-CCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence            5789999999999999999999887 8899999998754   23345688999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc--CCcEEEeeecccccCCCCC
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE--DGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~--~~~~kl~DFG~a~~~~~~~  256 (317)
                      |||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......
T Consensus        80 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           80 FEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             ECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             EEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            9999999999999653 346999999999999999999999999999999999999987  7899999999998765433


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...           ...++..|++||..     .........|+|++|++++|+..|.
T Consensus       159 ~~~-----------~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~~ll~g~  200 (321)
T 1tki_A          159 NFR-----------LLFTAPEYYAPEVH-----QHDVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             EEE-----------EEESCGGGSCHHHH-----TTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             ccc-----------cccCChhhcCcHHh-----cCCCCCchhhHHHHHHHHHHHHhCC
Confidence            211           11233445566554     3334567899999999999999993


No 46 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.7e-37  Score=270.47  Aligned_cols=203  Identities=25%  Similarity=0.347  Sum_probs=162.7

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH------------------------HHHHHHHHH
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA------------------------KKLSHVQME  150 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~E  150 (317)
                      ..+..++|++.+.||+|+||.||+|.+.. +++.||||++.......                        ...+.+.+|
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   86 (298)
T 2zv2_A            8 DCVQLNQYTLKDEIGKGSYGVVKLAYNEN-DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE   86 (298)
T ss_dssp             --CEETTEEEEEEEEC--CCEEEEEEETT-TTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred             CceeecceEEEeEEeecCCEEEEEEEECC-CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence            34667899999999999999999998877 78999999997643211                        224568899


Q ss_pred             HHHHHhcCCCCcceEEEEEEe--cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC
Q 042913          151 AEILSMLDHPFLPTLYAHLEV--SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDL  228 (317)
Q Consensus       151 ~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDi  228 (317)
                      +++++.++||||+++++++..  ...+|+||||+++++|.+++..   ..+++..++.++.||+.||.|||++||+||||
T Consensus        87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999999999999999986  6789999999999999987643   56999999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccc
Q 042913          229 KPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSV  308 (317)
Q Consensus       229 kp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (317)
                      ||+|||++.++.+||+|||+++..........          ...++..|++||.......  .......|+|+++++++
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----------~~~gt~~y~aPE~~~~~~~--~~~~~~~Di~slG~~l~  231 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLS----------NTVGTPAFMAPESLSETRK--IFSGKALDVWAMGVTLY  231 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSCEEC----------CCCSCGGGCCGGGCCTTCC--CEESHHHHHHHHHHHHH
T ss_pred             CHHHEEECCCCCEEEecCCCcccccccccccc----------CCcCCccccChhhhccCCC--CCCCchhhhHhHHHHHH
Confidence            99999999999999999999987654432211          1235556777776543221  11256789999999999


Q ss_pred             ccCCC
Q 042913          309 EQPGG  313 (317)
Q Consensus       309 e~~~G  313 (317)
                      |+..|
T Consensus       232 ~l~~g  236 (298)
T 2zv2_A          232 CFVFG  236 (298)
T ss_dssp             HHHHS
T ss_pred             HHHHC
Confidence            99998


No 47 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=4.1e-37  Score=292.85  Aligned_cols=203  Identities=28%  Similarity=0.397  Sum_probs=172.3

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..+..++|++.+.||+|+||.||+|.+.. +++.||+|++.+..... .....+.+|+++|+.++||||+++++++...+
T Consensus       179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~-tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  257 (576)
T 2acx_A          179 QPVTKNTFRQYRVLGKGGFGEVCACQVRA-TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD  257 (576)
T ss_dssp             SCCCGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCccccceEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC
Confidence            44677899999999999999999999887 89999999997654322 34466889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+|+...
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence            99999999999999999976655569999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....           ....++..|++||....     .......|+|++|++++|+..|.
T Consensus       338 ~~~~~-----------~~~~GT~~Y~APEvl~~-----~~~~~~~DiwSLGvilyeLltG~  382 (576)
T 2acx_A          338 EGQTI-----------KGRVGTVGYMAPEVVKN-----ERYTFSPDWWALGCLLYEMIAGQ  382 (576)
T ss_dssp             TTCCE-----------ECCCSCGGGCCHHHHTT-----CEESSHHHHHHHHHHHHHHHHSS
T ss_pred             cCccc-----------cccCCCccccCHHHHcC-----CCCCccchHHHHHHHHHHHHhCC
Confidence            43221           11134555666665543     34567899999999999999994


No 48 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=6.1e-37  Score=269.98  Aligned_cols=200  Identities=21%  Similarity=0.280  Sum_probs=165.7

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+.+++.++||||+++++++..++.+++|
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRE-THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECC-CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence            3689999999999999999999887 789999999987655555667888999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      |||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+........
T Consensus        80 ~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           80 FEFCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred             EecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence            99995 5666665443 467999999999999999999999999999999999999999999999999999876533221


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ..          ...++..|++||.....    .......|+|++|++++|+..| .|
T Consensus       158 ~~----------~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~l~~~~~p  201 (292)
T 3o0g_A          158 YS----------AEVVTLWYRPPDVLFGA----KLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             CC----------SCCSCGGGCCHHHHTTC----SCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             cc----------CCccccCCcChHHHcCC----CCcCchHHHHHHHHHHHHHHHcCCC
Confidence            11          12334556777655321    1246789999999999999965 55


No 49 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=4e-37  Score=276.66  Aligned_cols=199  Identities=24%  Similarity=0.355  Sum_probs=166.1

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++....... .....+.+|+.+++.++||||+++++++...+.+
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   84 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYK-TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI   84 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            456899999999999999999999877 78999999997654332 2345788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+ +|+|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|......
T Consensus        85 ~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           85 VMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             EEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             EEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            9999999 88999988653  67999999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceecc-chhhhccCCcccccccCCC-CC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAE-PRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ...           ....++..|++||...     .... ....|+|++|++++|+..| .|
T Consensus       162 ~~~-----------~~~~gt~~y~aPE~~~-----~~~~~~~~~DiwslG~il~~ll~g~~P  207 (336)
T 3h4j_B          162 NFL-----------KTSCGSPNYAAPEVIN-----GKLYAGPEVDVWSCGIVLYVMLVGRLP  207 (336)
T ss_dssp             BTT-----------CCCTTSTTTSCGGGSC-----CSGGGCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccc-----------ccccCCcCcCCHHHHc-----CCCCCCCccchhHHHHHHHHHHhCCCC
Confidence            211           1123445566666543     2222 5789999999999999998 44


No 50 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=4.5e-37  Score=275.01  Aligned_cols=199  Identities=23%  Similarity=0.314  Sum_probs=162.6

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECC-CCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            35799999999999999999999887 789999999965432 2334668899999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+.....
T Consensus        83 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           83 FLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             EEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             EEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            9999999999999965  46699999999999999999999999999999999999999999999999999976543221


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceecc-chhhhccCCcccccccCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAE-PRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~G  313 (317)
                      .        .......++..|++||..     ..... ....|+|++|++++|+..|
T Consensus       161 ~--------~~~~~~~gt~~y~aPE~~-----~~~~~~~~~~DiwslG~il~~ll~g  204 (323)
T 3tki_A          161 E--------RLLNKMCGTLPYVAPELL-----KRREFHAEPVDVWSCGIVLTAMLAG  204 (323)
T ss_dssp             E--------CCBCSCCSCGGGSCHHHH-----HCSSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             c--------cccCCCccCcCccCcHHh-----ccCCCCCCcccHHHHHHHHHHHHhC
Confidence            1        001112344556666654     32232 5679999999999999998


No 51 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=5.3e-37  Score=274.74  Aligned_cols=205  Identities=20%  Similarity=0.282  Sum_probs=166.7

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++.+.||+|+||.||+|.+...  .+..||||++.... .....+.+.+|+++++.++||||+++++++...
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  122 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG  122 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            457789999999999999999999998641  23459999997643 445567889999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +..|+||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            9999999999999999999654 357999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...........       ...++..|++||..     .........|+|+++++++|+.. |
T Consensus       202 ~~~~~~~~~~~-------~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~ell~~g  251 (325)
T 3kul_A          202 EDDPDAAYTTT-------GGKIPIRWTAPEAI-----AFRTFSSASDVWSFGVVMWEVLAYG  251 (325)
T ss_dssp             C----CCEECC----------CCGGGSCHHHH-----HHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             ccCccceeecc-------CCCCcccccCHhHh-----cCCCCCcHHHHHHHHHHHHHHHcCC
Confidence            55432211111       11223346666654     33445678999999999999987 7


No 52 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1e-36  Score=289.21  Aligned_cols=204  Identities=26%  Similarity=0.372  Sum_probs=172.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..+..++|++.+.||+|+||+||+|.+.. +++.||+|++.+..... .....+.+|+++++.++||||+++++++....
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~-tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  258 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKA-TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT  258 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC
Confidence            34667899999999999999999999877 89999999998754332 34567889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+|+||||++||+|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence            9999999999999999886542  45699999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .........          ...++..|++||....     .......|+|++|++++|+..|.
T Consensus       339 ~~~~~~~~~----------~~~GT~~Y~APE~l~~-----~~~~~~~DiwSlGvilyelltG~  386 (543)
T 3c4z_A          339 LKAGQTKTK----------GYAGTPGFMAPELLLG-----EEYDFSVDYFALGVTLYEMIAAR  386 (543)
T ss_dssp             CCTTCCCBC----------CCCSCTTTSCHHHHTT-----CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCcccc----------cccCCccccChhhhcC-----CCCChHHhcCcchHHHHHHHhCC
Confidence            654332211          1234556777776543     34567899999999999999993


No 53 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=8.6e-37  Score=286.19  Aligned_cols=204  Identities=21%  Similarity=0.354  Sum_probs=172.4

Q ss_pred             CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ...+.+..++|++++.||+|+||.||+|.+.. +++.||||++....... .....+.+|+.+++.++||||+++++++.
T Consensus         8 ~~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~   86 (476)
T 2y94_A            8 KHDGRVKIGHYILGDTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS   86 (476)
T ss_dssp             -CCSCCEETTEEEEEEEECCSSSCEEEEEETT-TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ccCCCceecCEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            34567888999999999999999999999887 79999999997653322 34567899999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ..+.+|+||||+++++|.+++..  .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~  164 (476)
T 2y94_A           87 TPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN  164 (476)
T ss_dssp             CSSEEEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchh
Confidence            99999999999999999999965  4679999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........ .          ...++..|++||......    ......|+|++|++++|+.+|
T Consensus       165 ~~~~~~~~-~----------~~~gt~~y~aPE~~~~~~----~~~~~~DiwSlGvil~elltG  212 (476)
T 2y94_A          165 MMSDGEFL-R----------TSCGSPNYAAPEVISGRL----YAGPEVDIWSSGVILYALLCG  212 (476)
T ss_dssp             ECCTTCCB-C----------CCCSCSTTCCHHHHTTCC----BCSHHHHHHHHHHHHHHHHHS
T ss_pred             hccccccc-c----------ccCCCcCeEChhhccCCC----CCCCcceehhhHHHHHHHhhC
Confidence            76442211 1          123455677777654321    124689999999999999999


No 54 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=6.1e-37  Score=277.23  Aligned_cols=202  Identities=21%  Similarity=0.284  Sum_probs=166.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH---HHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA---KKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      .+..++|++.+.||+|+||.||+|.+.. +++.||||++.......   ...+.+.+|+.+++.++||||+++++++...
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           20 VLFEDVYELCEVIGKGPFSVVRRCINRE-TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD   98 (351)
T ss_dssp             CCHHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             CccccceEEeeEEeeCCCEEEEEEEECC-CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3455789999999999999999998887 88999999997543211   1356789999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeec
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH---IMLSDFD  247 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~---~kl~DFG  247 (317)
                      +.+|+||||+++++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            9999999999999998877543  2345899999999999999999999999999999999999986654   9999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +++..........          ...++..|++||....     .......|+|+++++++|+..|
T Consensus       179 ~a~~~~~~~~~~~----------~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~ll~g  229 (351)
T 3c0i_A          179 VAIQLGESGLVAG----------GRVGTPHFMAPEVVKR-----EPYGKPVDVWGCGVILFILLSG  229 (351)
T ss_dssp             TCEECCTTSCBCC----------CCCSCGGGCCHHHHTT-----CCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ceeEecCCCeeec----------CCcCCcCccCHHHHcC-----CCCCchHhhHHHHHHHHHHHHC
Confidence            9987654332111          1234556666665543     3346789999999999999999


No 55 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=5.7e-37  Score=274.80  Aligned_cols=203  Identities=30%  Similarity=0.463  Sum_probs=159.0

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEc--CCCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLR--DCTSANFALKVVDKDLLS--AKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~--~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|++++.||+|+||.||+|...  ..+++.||+|++.+....  ......+.+|+.+++.++||||+++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            3567789999999999999999999875  236899999999765322  234566788999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ..+.+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           92 TGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             CSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            999999999999999999999653  568999999999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .........          ....++..|++||....     .......|+|++|++++|+..|.
T Consensus       170 ~~~~~~~~~----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~  218 (327)
T 3a62_A          170 ESIHDGTVT----------HTFCGTIEYMAPEILMR-----SGHNRAVDWWSLGALMYDMLTGA  218 (327)
T ss_dssp             -------------------CTTSSCCTTSCHHHHTT-----SCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCccc----------cccCCCcCccCHhhCcC-----CCCCCcccchhHHHHHHHHHHCC
Confidence            643322211          11235566777776543     23467899999999999999993


No 56 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=8.1e-37  Score=271.70  Aligned_cols=202  Identities=17%  Similarity=0.256  Sum_probs=163.1

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ...+..++|++.+.||+|+||.||+|.+.   +..||+|++..........+.+.+|+++++.++||||+++++++...+
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEEC---CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34567789999999999999999999764   688999999877666777788999999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPN-NRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      .+++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||+|+
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            99999999999999999965421 23899999999999999999999999  9999999999999999999999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........          .....++..|++||....     .....++|+|+++++++|+..|
T Consensus       188 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~elltg  235 (309)
T 3p86_A          188 LKASTFLS----------SKSAAGTPEWMAPEVLRD-----EPSNEKSDVYSFGVILWELATL  235 (309)
T ss_dssp             ------------------------CCTTSCHHHHTT-----CCCCTTHHHHHHHHHHHHHHHC
T ss_pred             cccccccc----------cccCCCCccccChhhhcC-----CCCCchhhHHHHHHHHHHHHhC
Confidence            54332211          111245556777776543     3346789999999999999988


No 57 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3.8e-37  Score=287.27  Aligned_cols=203  Identities=27%  Similarity=0.506  Sum_probs=160.2

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..+..++|++++.||+|+||.||+|.+.. +++.||||++..... .......+.+|+.+++.++||||+++++++...+
T Consensus       143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          143 HRVTMNEFEYLKLLGKGTFGKVILVKEKA-TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             cCCChHHcEEeEEEeeCcCEEEEEEEEcC-CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            34567899999999999999999999887 899999999986543 2345567888999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      .+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||+ .||+||||||+||||+.++.+||+|||+|+..
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             EEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            999999999999999999653  679999999999999999999998 99999999999999999999999999999864


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ........          ...++..|++||..     .........|+|++|++++|+..| .|
T Consensus       300 ~~~~~~~~----------~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~ell~g~~P  348 (446)
T 4ejn_A          300 IKDGATMK----------TFCGTPEYLAPEVL-----EDNDYGRAVDWWGLGVVMYEMMCGRLP  348 (446)
T ss_dssp             CC-----C----------CSSSCGGGCCHHHH-----HTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCcccc----------cccCCccccCHhhc-----CCCCCCCccchhhhHHHHHHHhhCCCC
Confidence            33222111          12345566666654     333456889999999999999998 44


No 58 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-36  Score=272.06  Aligned_cols=198  Identities=22%  Similarity=0.301  Sum_probs=166.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++.......    ...+.+.+|+.+++.++||||+++++++....
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cccceEeceEEeeCCCeEEEEEEECC-CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34689999999999999999999887 78999999997653221    13467889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeeccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG----HIMLSDFDLC  249 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~----~~kl~DFG~a  249 (317)
                      .+++||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+|
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            99999999999999999954  46799999999999999999999999999999999999999877    8999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +........           ....++..|++||...     ........|+|+++++++|+..|.
T Consensus       166 ~~~~~~~~~-----------~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g~  214 (326)
T 2y0a_A          166 HKIDFGNEF-----------KNIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGA  214 (326)
T ss_dssp             EECCTTSCC-----------CCCCSCTTTCCHHHHT-----TCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             eECCCCCcc-----------ccccCCcCcCCceeec-----CCCCCcHHHHHHHHHHHHHHHHCc
Confidence            876543211           1123555677776553     334567899999999999999983


No 59 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=2.2e-36  Score=270.29  Aligned_cols=215  Identities=21%  Similarity=0.266  Sum_probs=178.1

Q ss_pred             CcchhhHHHhhccCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC
Q 042913           79 DLHWSAIKAATNLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD  158 (317)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~  158 (317)
                      .++..++..+++...........|...+.||+|+||.||+|.+.. +++.||||++....  ....+.+.+|+.+++.++
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKH-SGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCC
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECC-CCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCC
Confidence            356777777776655554455568899999999999999999876 78999999997543  233466889999999999


Q ss_pred             CCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913          159 HPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED  238 (317)
Q Consensus       159 h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~  238 (317)
                      ||||+++++++...+..++||||+++++|.+++..   ..+++..++.++.||+.||.|||+.||+||||||+|||++.+
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            99999999999999999999999999999999854   469999999999999999999999999999999999999999


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +.+||+|||+++.........          ....++..|++||....     .......|+|++|++++|+..|.
T Consensus       178 ~~~kl~Dfg~~~~~~~~~~~~----------~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~  238 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDVPKR----------KSLVGTPYWMAPEVISR-----SLYATEVDIWSLGIMVIEMVDGE  238 (321)
T ss_dssp             CCEEECCCTTCEECCSSSCCB----------CCCCSCGGGCCHHHHTT-----CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcEEEeeeeeeeecccCcccc----------ccccCCccccCHhhhcC-----CCCCchhhHHHHHHHHHHHHhCC
Confidence            999999999998765432211          12245566777776643     23456899999999999999983


No 60 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-36  Score=276.12  Aligned_cols=196  Identities=19%  Similarity=0.278  Sum_probs=166.4

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++....  ......+.+|+++++.++||||+++++++.....+++|
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  126 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI  126 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECC-CCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence            4789999999999999999999887 78999999997652  33445788999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc--CCcEEEeeecccccCCCCC
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE--DGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~--~~~~kl~DFG~a~~~~~~~  256 (317)
                      |||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+|+......
T Consensus       127 ~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             EECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             EEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence            9999999999998654 356999999999999999999999999999999999999974  5789999999998765433


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...           ...++..|++||....     ......+|+|++|++++|+..|.
T Consensus       206 ~~~-----------~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~  247 (387)
T 1kob_A          206 IVK-----------VTTATAEFAAPEIVDR-----EPVGFYTDMWAIGVLGYVLLSGL  247 (387)
T ss_dssp             CEE-----------EECSSGGGCCHHHHTT-----CCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             cee-----------eeccCCCccCchhccC-----CCCCCcccEeeHhHHHHHHHhCC
Confidence            211           1134556777776543     33467899999999999999993


No 61 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.3e-36  Score=271.96  Aligned_cols=210  Identities=17%  Similarity=0.231  Sum_probs=161.4

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC-----
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH-----  173 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----  173 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|+++++.++||||+++++++....     
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKV-DDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETT-TCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcC-CCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence            4789999999999999999999886 78999999997543 2344577899999999999999999999985543     


Q ss_pred             ----------------------------------------------------EEEEEEcccCCCChhcccccCCC-CCCC
Q 042913          174 ----------------------------------------------------YICFLIDYCPNGDLHSLLPKQPN-NRFS  200 (317)
Q Consensus       174 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~~~  200 (317)
                                                                          .+++||||+++++|.+++..... ....
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence                                                                38999999999999999976422 2346


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccc--ccccccccccccCCC
Q 042913          201 LQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNV--GSATRRRRRKSCNGF  278 (317)
Q Consensus       201 ~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  278 (317)
                      +..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.............  ..........++..|
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            667899999999999999999999999999999999999999999999987765432111100  000111122344455


Q ss_pred             CCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          279 GSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       279 ~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ++||..     .........|+|++|++++|+..|.+
T Consensus       243 ~aPE~~-----~~~~~~~~~Di~slG~il~el~~~~~  274 (332)
T 3qd2_B          243 MSPEQI-----HGNNYSHKVDIFSLGLILFELLYSFS  274 (332)
T ss_dssp             SCHHHH-----HCCCCCTHHHHHHHHHHHHHHHSCCC
T ss_pred             cChHHh-----cCCCCcchhhHHHHHHHHHHHHHcCC
Confidence            555544     44455688999999999999998853


No 62 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.6e-36  Score=269.97  Aligned_cols=201  Identities=18%  Similarity=0.241  Sum_probs=163.8

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      +...++|++++.||+|+||.||+|.+.  +++.||+|++............+.+|+++++.++||||+++++++...+.+
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   94 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL   94 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence            445689999999999999999999885  489999999976644445567788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus        95 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             EEEEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred             EEEEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence            99999995 5888877654 356999999999999999999999999999999999999999999999999999876533


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ....          ....++..|++||.....    .......|+|++|++++|+..|.
T Consensus       173 ~~~~----------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~ll~g~  217 (311)
T 3niz_A          173 VRSY----------THEVVTLWYRAPDVLMGS----KKYSTSVDIWSIGCIFAEMITGK  217 (311)
T ss_dssp             CC-------------CCCCCCTTCCHHHHTTC----CSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccc----------cCCcccCCcCCHHHhcCC----CCCCchHHhHHHHHHHHHHHhCC
Confidence            2211          112345667777765321    23357899999999999999984


No 63 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-36  Score=271.31  Aligned_cols=205  Identities=19%  Similarity=0.230  Sum_probs=166.7

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC--
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH--  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--  173 (317)
                      ....++|++.+.||+|+||.||+|.+.. +++.||||++..... ....+.+.+|+++++.++||||+++++++....  
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   82 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKK-TGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc
Confidence            3456889999999999999999999887 789999999976432 233466789999999999999999999988655  


Q ss_pred             EEEEEEcccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeecc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL----REDGHIMLSDFDL  248 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill----~~~~~~kl~DFG~  248 (317)
                      ..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            7899999999999999997642 2338999999999999999999999999999999999999    7778899999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCccccccccc---ceeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM---EFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |+........           ....++..|++||.......   .........|+|+++++++|+..|
T Consensus       163 a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  219 (319)
T 4euu_A          163 ARELEDDEQF-----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG  219 (319)
T ss_dssp             CEECCTTCCB-----------CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             ceecCCCCce-----------eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhC
Confidence            9876543321           11235556777775432111   123456789999999999999998


No 64 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1e-36  Score=273.34  Aligned_cols=204  Identities=22%  Similarity=0.314  Sum_probs=165.4

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  175 (317)
                      +..++|++.+.||+|+||.||+|.+.. +++.||||++.....    ...+.+|+++++.+ +|+||+++++++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   80 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLY-TNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYN   80 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETT-TTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECC-CCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCcc
Confidence            455789999999999999999999876 789999999875422    23578899999999 899999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc-----EEEeeecccc
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH-----IMLSDFDLCF  250 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~-----~kl~DFG~a~  250 (317)
                      ++||||+ +++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.     +||+|||+|+
T Consensus        81 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           81 AMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             EEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            9999999 99999999764 467999999999999999999999999999999999999998887     9999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .+..........   ........++..|++||..     .......++|+|++|++++|+..| .|
T Consensus       159 ~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Di~slG~il~ell~g~~P  216 (330)
T 2izr_A          159 EYIDPETKKHIP---YREHKSLTGTARYMSINTH-----LGKEQSRRDDLEALGHMFMYFLRGSLP  216 (330)
T ss_dssp             ESBCTTTCCBCC---CCCCCCCCSCTTTCCHHHH-----TTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             eeecCCCCcccc---ccccCCcCCCccccChHHH-----cCCCCCchhHHHHHHHHHHHHhcCCCC
Confidence            764433211100   0011122344555555544     444557899999999999999999 44


No 65 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=3.6e-36  Score=267.63  Aligned_cols=200  Identities=18%  Similarity=0.221  Sum_probs=164.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  173 (317)
                      +.+..++|+++++||+|+||+||+|.+.. +++.||||++...............|+..+..+ +|+||+++++++...+
T Consensus        52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKE-DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             SCHHHHHEEEEEEEEEETTEEEEEEEETT-TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cchhhhheeeeheeccCCCeEEEEEEECC-CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            45566889999999999999999999887 789999999876544555555555666655554 8999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+ +++|.+++... ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|+...
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             EEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999999999 88999888654 3569999999999999999999999999999999999999999999999999997664


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ....           .....++.+|++||....      ......|+|+++++++|+.+|.
T Consensus       209 ~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~el~~g~  252 (311)
T 3p1a_A          209 TAGA-----------GEVQEGDPRYMAPELLQG------SYGTAADVFSLGLTILEVACNM  252 (311)
T ss_dssp             -----------------CCCCCGGGCCGGGGGT------CCSTHHHHHHHHHHHHHHHHTC
T ss_pred             cCCC-----------CcccCCCccccCHhHhcC------CCCchhhHHHHHHHHHHHHhCC
Confidence            3221           111235667888887643      2456899999999999999983


No 66 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=8.5e-36  Score=261.29  Aligned_cols=197  Identities=22%  Similarity=0.318  Sum_probs=168.6

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+.+++.++||||+++++++...+..++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   82 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcC-CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence            35789999999999999999998887 78999999998876677777889999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH---IMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~---~kl~DFG~a~~~~~  254 (317)
                      ||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.   +||+|||++.....
T Consensus        83 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           83 VFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            99999999999888653  56899999999999999999999999999999999999986655   99999999976543


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....           ....++..|++||...     ........|+|+++++++|+..|
T Consensus       161 ~~~~-----------~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~~l~~g  203 (284)
T 3kk8_A          161 SEAW-----------HGFAGTPGYLSPEVLK-----KDPYSKPVDIWACGVILYILLVG  203 (284)
T ss_dssp             SCBC-----------CCSCSCGGGCCHHHHT-----TCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             Cccc-----------cCCCCCcCCcCchhhc-----CCCCCcccchHHHHHHHHHHHHC
Confidence            3211           1123445566666543     33456789999999999999998


No 67 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=6.8e-36  Score=270.93  Aligned_cols=201  Identities=22%  Similarity=0.324  Sum_probs=170.2

Q ss_pred             cCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-----CCCcceE
Q 042913           91 LSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-----HPFLPTL  165 (317)
Q Consensus        91 ~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~~iv~~  165 (317)
                      .+..+.+..++|++++.||+|+||.||+|.+.. +++.||||++...   ......+..|+++++.+.     ||||+++
T Consensus        26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHID-NKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             CCCTTCEETTTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeecceEecCEEEEEEEEcccCCeEEEEEEECC-CCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            356777888999999999999999999999877 7899999999643   344566788999999986     9999999


Q ss_pred             EEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc--------
Q 042913          166 YAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE--------  237 (317)
Q Consensus       166 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~--------  237 (317)
                      ++++...+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.        
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence            99999999999999999 999999998776667999999999999999999999999999999999999975        


Q ss_pred             -----------------CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhc
Q 042913          238 -----------------DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQR  300 (317)
Q Consensus       238 -----------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~  300 (317)
                                       ++.+||+|||+|+.......             ...++..|++||...     ........|+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~gt~~y~aPE~~~-----~~~~~~~~Di  242 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-------------SIINTRQYRAPEVIL-----NLGWDVSSDM  242 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC-------------SCCSCGGGCCHHHHT-----TCCCCTTHHH
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCCCCc-------------CccCcccccCcHHHc-----CCCCCCccch
Confidence                             78999999999976433211             123445566666554     3345678999


Q ss_pred             cCCcccccccCCCC
Q 042913          301 EHPAQYSVEQPGGV  314 (317)
Q Consensus       301 ~~~~~~~~e~~~G~  314 (317)
                      |++|++++|+..|-
T Consensus       243 wslG~il~ell~g~  256 (360)
T 3llt_A          243 WSFGCVLAELYTGS  256 (360)
T ss_dssp             HHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHCC
Confidence            99999999999993


No 68 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.5e-36  Score=267.70  Aligned_cols=206  Identities=22%  Similarity=0.296  Sum_probs=163.2

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEE---cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHL---RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ...+..++|++++.||+|+||.||+|.+   ...+++.||+|++...  .....+.+.+|+++++.++||||+++++++.
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   81 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCY   81 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            3467789999999999999999999985   2337899999999754  4556678999999999999999999999985


Q ss_pred             e--cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecc
Q 042913          171 V--SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDL  248 (317)
Q Consensus       171 ~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~  248 (317)
                      .  ...+++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence            4  45689999999999999999765 34589999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      |+...........       .....++..|++||...     ......++|+|+++++++|+..|.
T Consensus       161 ~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~~l~~l~~g~  214 (295)
T 3ugc_A          161 TKVLPQDKEFFKV-------KEPGESPIFWYAPESLT-----ESKFSVASDVWSFGVVLYELFTYI  214 (295)
T ss_dssp             CC--------------------CTTCGGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCcceeee-------ccCCCCccceeCcHHhc-----CCCCChHHHHHHHHHHHHHHHhcc
Confidence            9876543321110       11112333467776553     334567899999999999999873


No 69 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.9e-36  Score=282.36  Aligned_cols=196  Identities=16%  Similarity=0.214  Sum_probs=160.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----  172 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----  172 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++..........+++.+|+.+++.++||||+++++++...     
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAV-LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETT-TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            45899999999999999999998887 799999999987766677778899999999999999999999999644     


Q ss_pred             -CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          173 -HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       173 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                       ..+|+||||++ +.|.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus       139 ~~~~~lv~E~~~-~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          139 FQDVYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  213 (464)
T ss_dssp             CCEEEEEEECCS-EEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred             CCeEEEEEeCCC-CCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence             46899999995 55777663    2489999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ......           .....++..|++||....     .......|+|++|++++|+..|-|
T Consensus       214 ~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~  261 (464)
T 3ttj_A          214 AGTSFM-----------MTPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGEMVRHKI  261 (464)
T ss_dssp             ---CCC-----------C----CCCTTCCHHHHTT-----CCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCcc-----------cCCCcccccccCHHHHcC-----CCCCHHHHHHHHHHHHHHHHhCCC
Confidence            543221           112245566777776643     234578999999999999999843


No 70 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.9e-36  Score=261.61  Aligned_cols=198  Identities=23%  Similarity=0.285  Sum_probs=164.5

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++.+.||+|+||.||+|.+..  ++.||+|++.......   +.+.+|+++++.++||||+++++++...+..
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   80 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   80 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             EeChhhceeeheecCCCccEEEEEEecC--CCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEecCCce
Confidence            4667899999999999999999998874  7789999998654333   4588899999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           81 CLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             EEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             EEEEEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence            9999999999999999654 356899999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...         ......++..|++||..     ........+|+|+++++++|+.. |
T Consensus       160 ~~~---------~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~~l~~ll~~g  204 (269)
T 4hcu_A          160 QYT---------SSTGTKFPVKWASPEVF-----SFSRYSSKSDVWSFGVLMWEVFSEG  204 (269)
T ss_dssp             HHH---------STTSTTCCGGGCCHHHH-----HHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccc---------cccCcccccccCCHHHh-----cCCCCCchhhhHHHHHHHHHHhcCC
Confidence            111         00111223346666654     33445678999999999999987 6


No 71 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=6e-37  Score=272.58  Aligned_cols=204  Identities=20%  Similarity=0.231  Sum_probs=162.6

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .....++|++.+.||+|+||.||+|.+.. +++.||||++..... .......+.+|+++++.++||||+++++++....
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   85 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECC-CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence            34557899999999999999999999877 789999999976533 3455678899999999999999999999987543


Q ss_pred             ----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          174 ----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       174 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                          ..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        86 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           86 PAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             TTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             CCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence                359999999999999999653  57999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +.........       .......++..|++||....     .....+.|+|+++++++|+..|
T Consensus       164 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~~l~~ll~g  215 (311)
T 3ork_A          164 RAIADSGNSV-------TQTAAVIGTAQYLSPEQARG-----DSVDARSDVYSLGCVLYEVLTG  215 (311)
T ss_dssp             -------------------------CCTTCCHHHHHT-----CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccc-------ccccccCcCcccCCHHHhcC-----CCCCchHhHHHHHHHHHHHHhC
Confidence            7664432111       11112245666777776543     3345789999999999999998


No 72 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=5.5e-36  Score=278.27  Aligned_cols=208  Identities=19%  Similarity=0.244  Sum_probs=164.6

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----  172 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----  172 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++..........+++.+|+++|+.++|+||+++++++...     
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKN-TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECC-CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            35799999999999999999999887 889999999987665667778899999999999999999999998766     


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ..+|+||||+ +++|.+++..  ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+..
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          103 DELYIVLEIA-DSDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             CCEEEEEECC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CeEEEEEecC-CcCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            5799999999 5799999965  467999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecc-------ccc-----ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          253 DVVPTLVETN-------VGS-----ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       253 ~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ..........       .+.     ........++..|++||...    .........|+|++|++++|+..|
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~----~~~~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL----LQENYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHT----TCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHh----cCCCCCcccccchHHHHHHHHHhc
Confidence            5433210000       000     00112234455566666431    223356789999999999999974


No 73 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.6e-36  Score=294.41  Aligned_cols=204  Identities=25%  Similarity=0.453  Sum_probs=167.7

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSML-DHPFLPTLYAHLE  170 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  170 (317)
                      ....+..++|++++.||+|+||+||+|.+.. +++.||||++.+.... ....+.+..|..++..+ +|++|+++++++.
T Consensus       334 ~~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~-~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~  412 (674)
T 3pfq_A          334 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ  412 (674)
T ss_dssp             ------CTTEEEEEESSBTTTBCEEEEEESS-SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB
T ss_pred             ccccccccceEEEEEEccCCCEEEEEEEECC-CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE
Confidence            3445778999999999999999999999887 8899999999875332 24456788899999887 6999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ..+.+||||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+
T Consensus       413 ~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~  490 (674)
T 3pfq_A          413 TMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  490 (674)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred             eCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceee
Confidence            999999999999999999999764  579999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..........+          ..++..|++||..     .........|+|++|++++|+..|.
T Consensus       491 ~~~~~~~~~~~----------~~GT~~Y~APE~l-----~~~~~~~~~DvwSlGvilyelltG~  539 (674)
T 3pfq_A          491 ENIWDGVTTKT----------FCGTPDYIAPEII-----AYQPYGKSVDWWAFGVLLYEMLAGQ  539 (674)
T ss_dssp             ECCCTTCCBCC----------CCSCSSSCCHHHH-----TCCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCccccc----------ccCCCcccCHhhh-----cCCCCCccceEechHHHHHHHHcCC
Confidence            64332221111          2344566666655     3344578899999999999999994


No 74 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=5.1e-36  Score=270.98  Aligned_cols=195  Identities=23%  Similarity=0.315  Sum_probs=152.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ....++|++.+.||+|+||.||+|.+.. +++.||||++....    ..+.+.+|+++++.++||||+++++++...+.+
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  123 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKG-TQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEI  123 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECC-CCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeE
Confidence            3445789999999999999999999887 78999999997542    335678899999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecccccC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDLCFQS  252 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~a~~~  252 (317)
                      ++||||+++++|.+++..  ...+++..++.++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+++..
T Consensus       124 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          124 SLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             EEEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            999999999999999955  466999999999999999999999999999999999999975   889999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....           .....++..|++||....     .......|+|++|++++|+..|
T Consensus       202 ~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g  246 (349)
T 2w4o_A          202 EHQVL-----------MKTVCGTPGYCAPEILRG-----CAYGPEVDMWSVGIITYILLCG  246 (349)
T ss_dssp             ----------------------CGGGSCHHHHTT-----CCCCTHHHHHHHHHHHHHHHHS
T ss_pred             Ccccc-----------cccccCCCCccCHHHhcC-----CCCCcccchHHHHHHHHHHHhC
Confidence            43211           011234556777776543     2346789999999999999998


No 75 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=5.6e-36  Score=265.78  Aligned_cols=203  Identities=23%  Similarity=0.265  Sum_probs=159.0

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc---HHHHHHHHHHHHHHHhc---CCCCcceEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS---AKKLSHVQMEAEILSML---DHPFLPTLYAH  168 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l---~h~~iv~~~~~  168 (317)
                      +.+..++|++++.||+|+||.||+|.+.. +++.||+|++......   ......+.+|+.+++.+   +||||++++++
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPH-SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTT-TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            34567899999999999999999998776 7899999998743211   11123455666666655   59999999999


Q ss_pred             EEecC-----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEE
Q 042913          169 LEVSH-----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIML  243 (317)
Q Consensus       169 ~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl  243 (317)
                      +....     .+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             EEECCSSSEEEEEEEEECC-CCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEE
T ss_pred             eeccCCCCceeEEEEehhh-hcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence            98755     589999999 579999998766566999999999999999999999999999999999999999999999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +|||+|+........           ....++..|++||....     .......|+|+++++++|+..|.|
T Consensus       162 ~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~  217 (308)
T 3g33_A          162 ADFGLARIYSYQMAL-----------TPVVVTLWYRAPEVLLQ-----STYATPVDMWSVGCIFAEMFRRKP  217 (308)
T ss_dssp             CSCSCTTTSTTCCCS-----------GGGGCCCSSCCHHHHHT-----SCCCSTHHHHHHHHHHHHTTTSSC
T ss_pred             eeCccccccCCCccc-----------CCccccccccCchHHcC-----CCCCchHHHHHHHHHHHHHHhCCC
Confidence            999999865432211           12245566777776543     234568999999999999999944


No 76 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1e-35  Score=271.36  Aligned_cols=194  Identities=22%  Similarity=0.333  Sum_probs=157.3

Q ss_pred             CeEE--eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913          101 HLKL--VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus       101 ~y~i--~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .|.+  .+.||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+++++.++||||+++++++...+.+++|
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  164 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETA-TGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLV  164 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETT-TCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcC-CCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            4554  6789999999999999877 7899999999765  234557789999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE--ccCCcEEEeeecccccCCCCC
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL--REDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill--~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      |||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||+  +.++.+||+|||+|+......
T Consensus       165 ~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          165 MEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             EECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred             EeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence            9999999999988653 3468999999999999999999999999999999999999  566799999999998765432


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..           ....++..|++||...     ........|+|+++++++|+..|.
T Consensus       244 ~~-----------~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~elltg~  285 (373)
T 2x4f_A          244 KL-----------KVNFGTPEFLAPEVVN-----YDFVSFPTDMWSVGVIAYMLLSGL  285 (373)
T ss_dssp             BC-----------CCCCSSCTTCCHHHHT-----TCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cc-----------ccccCCCcEeChhhcc-----CCCCCcHHhHHHHHHHHHHHHhCC
Confidence            11           1123556677777553     334567899999999999999993


No 77 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=6.4e-36  Score=260.03  Aligned_cols=200  Identities=21%  Similarity=0.270  Sum_probs=165.8

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++++.||+|+||.||+|.+..  +..||+|++.......   +.+.+|+++++.++||||+++++++...+..
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKG--QYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECBTTBCH---HHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             EechhheeeeeeeccCCCceEEEEEecC--ceeEEEEEeccCCCcH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence            4667899999999999999999998774  7789999997654333   4578899999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus        79 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             EEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            9999999999999999654 345899999999999999999999999999999999999999999999999999876543


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      .....  .       ...++..|++||..     .........|+|+++++++|+.. | .|
T Consensus       158 ~~~~~--~-------~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (268)
T 3sxs_A          158 QYVSS--V-------GTKFPVKWSAPEVF-----HYFKYSSKSDVWAFGILMWEVFSLGKMP  205 (268)
T ss_dssp             CEEEC--C-------SCCCCGGGCCHHHH-----HHSEEETTHHHHHHHHHHHHHHTTTCCT
T ss_pred             hhhcc--c-------CCCcCcccCCHHHH-----hccCCchhhhhHHHHHHHHHHHcCCCCC
Confidence            32111  1       11223346666654     44445678999999999999987 7 44


No 78 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=2.6e-36  Score=265.08  Aligned_cols=204  Identities=18%  Similarity=0.206  Sum_probs=173.4

Q ss_pred             CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      +....+..++|++.+.||+|+||.||+|.+.. ++..||+|++....   ...+.+.+|+++++.++||||+++++++..
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   80 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR   80 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGG-GTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecC-CCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence            45567788999999999999999999999887 78999999997542   344678899999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+..|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        81 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999999999999999876667799999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      .........         ....++..|++||....     ......+|+|+++++++|+.. |
T Consensus       161 ~~~~~~~~~---------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~ll~~g  209 (288)
T 3kfa_A          161 MTGDTYTAH---------AGAKFPIKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYG  209 (288)
T ss_dssp             SCSSSSEEE---------TTEEECGGGCCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccCCccccc---------cCCccccCcCChhhhcc-----CCCCchhhHHHHHHHHHHHHhCC
Confidence            654332211         11123445777776543     334678999999999999998 7


No 79 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=5e-36  Score=272.26  Aligned_cols=198  Identities=21%  Similarity=0.270  Sum_probs=158.6

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||||++......   .+.+.+|+.+++.++||||+++++++...+.+|
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   92 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLA   92 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETT-TCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECC-CCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence            345789999999999999999999887 7899999999764322   245788999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--EEEeeecccccCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH--IMLSDFDLCFQSDV  254 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~--~kl~DFG~a~~~~~  254 (317)
                      +||||+++++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+|+....
T Consensus        93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            999999999999998653  56999999999999999999999999999999999999987665  99999999874322


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ...           .....++..|++||......    .....+|+|++|++++|+..| .|
T Consensus       171 ~~~-----------~~~~~gt~~y~aPE~~~~~~----~~~~~~DiwslG~il~ell~g~~P  217 (361)
T 3uc3_A          171 HSQ-----------PKSTVGTPAYIAPEVLLRQE----YDGKIADVWSCGVTLYVMLVGAYP  217 (361)
T ss_dssp             ---------------------CTTSCHHHHHCSS----CCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCC-----------CCCCcCCCCcCChhhhcCCC----CCCCeeeeehhHHHHHHHHhCCCC
Confidence            111           11124556677777653221    123558999999999999999 44


No 80 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.7e-36  Score=274.36  Aligned_cols=210  Identities=21%  Similarity=0.266  Sum_probs=157.8

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecC--
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSH--  173 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~--  173 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||||++............+.+|+.+++.+. ||||+++++++...+  
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRR-TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETT-TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECC-CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            456899999999999999999999887 8999999999766556677788899999999997 999999999997544  


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||++ ++|.+++..   ..+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+.+.
T Consensus        85 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           85 DVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             CEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             EEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            7999999995 789998865   468999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecc-----------cccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          254 VVPTLVETN-----------VGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       254 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      .........           ...........++..|++||....    ........|+|++|++++|+..|-|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwSlG~il~ell~g~~  229 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG----STKYTKGIDMWSLGCILGEILCGKP  229 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT----CCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcC----CCCCCChhhHHHHHHHHHHHHhCCC
Confidence            422111100           000011112234445555554422    1344678999999999999999954


No 81 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-35  Score=271.89  Aligned_cols=205  Identities=22%  Similarity=0.270  Sum_probs=168.3

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYA  167 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  167 (317)
                      ..+..++|++.+.||+|+||.||+|.+..      ..+..||+|++.... .......+.+|+++++.+ +||||+++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            35677899999999999999999998753      133579999997653 456667899999999999 8999999999


Q ss_pred             EEEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913          168 HLEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI  233 (317)
Q Consensus       168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni  233 (317)
                      ++...+..++||||+++++|.+++....              ...+++..++.++.||+.||.|||+.||+||||||+||
T Consensus       143 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  222 (382)
T 3tt0_A          143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  222 (382)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceE
Confidence            9999999999999999999999997643              24589999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-
Q 042913          234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-  312 (317)
Q Consensus       234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-  312 (317)
                      |++.++.+||+|||+|+...........        ....++..|++||...     ......+.|+|+++++++|+.. 
T Consensus       223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~--------~~~~~t~~y~aPE~~~-----~~~~~~~~DiwslG~il~ellt~  289 (382)
T 3tt0_A          223 LVTEDNVMKIADFGLARDIHHIDYYKKT--------TNGRLPVKWMAPEALF-----DRIYTHQSDVWSFGVLLWEIFTL  289 (382)
T ss_dssp             EECTTCCEEECSCSCCCCSSCCCTTCCC--------TTCCCGGGGSCHHHHH-----SCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCCcEEEcccCcccccccccccccc--------cCCCCCcceeCHHHhc-----CCCCCchhHHHHHHHHHHHHHhC
Confidence            9999999999999999866543221111        1112334566666553     3345678999999999999987 


Q ss_pred             C
Q 042913          313 G  313 (317)
Q Consensus       313 G  313 (317)
                      |
T Consensus       290 g  290 (382)
T 3tt0_A          290 G  290 (382)
T ss_dssp             S
T ss_pred             C
Confidence            6


No 82 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=8.4e-36  Score=261.24  Aligned_cols=199  Identities=19%  Similarity=0.287  Sum_probs=166.7

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  176 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+.++..+ +||||+++++++...+..+
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcC-CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            35789999999999999999999886 789999999987654455567788999999999 8999999999999999999


Q ss_pred             EEEcccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC----------------
Q 042913          177 FLIDYCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED----------------  238 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~----------------  238 (317)
                      +||||+++++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+                
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            9999999999999996532  2568999999999999999999999999999999999999844                


Q ss_pred             ---CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          239 ---GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       239 ---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                         ..+||+|||++........              ..++..|++||....+    .......|+|+++++++|+..|.|
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~--------------~~gt~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~~~~  229 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQV--------------EEGDSRFLANEVLQEN----YTHLPKADIFALALTVVCAAGAEP  229 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSCC--------------CCCCGGGCCHHHHTTC----CTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCceEEEEcccccccccCCccc--------------cCCCccccChhHhcCC----CCCCchhhHHHHHHHHHHHhcCCC
Confidence               4799999999987654321              1355567777765432    123468999999999999999965


No 83 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=7.9e-36  Score=264.96  Aligned_cols=199  Identities=22%  Similarity=0.257  Sum_probs=164.7

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++||||+++++++...+..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRD-TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCC-CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            4789999999999999999999887 789999999977655556677889999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      |||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+........
T Consensus        81 ~e~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           81 FEYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             EECCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEeCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence            999999999988854  366999999999999999999999999999999999999999999999999999876543322


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..          ...++..|++||.....    .......|+|++|++++|+..|.
T Consensus       159 ~~----------~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~g~  200 (311)
T 4agu_A          159 YD----------DEVATRWYRSPELLVGD----TQYGPPVDVWAIGCVFAELLSGV  200 (311)
T ss_dssp             -----------------GGGCCHHHHHTC----SCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cC----------CCcCCccccChHHHhcC----CCCCcchhhHHHHHHHHHHHhCC
Confidence            11          12344557777765321    23357899999999999999994


No 84 
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9e-37  Score=276.55  Aligned_cols=205  Identities=30%  Similarity=0.463  Sum_probs=166.8

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhh--cHHHHHHHHHHHHHHHhc-CCCCcceEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLL--SAKKLSHVQMEAEILSML-DHPFLPTLYAHL  169 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~  169 (317)
                      ..+..++|++++.||+|+||.||+|....  .+++.||||++.....  .....+.+.+|+++++.+ +||||+++++++
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  128 (355)
T 1vzo_A           49 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF  128 (355)
T ss_dssp             CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             ccccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE
Confidence            34566899999999999999999998842  3689999999865421  112334567799999999 699999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      ...+.+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            9999999999999999999999653  56999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +........         ......++..|++||......   .....+.|+|+++++++|+..|
T Consensus       207 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~---~~~~~~~DvwslG~il~ell~g  258 (355)
T 1vzo_A          207 KEFVADETE---------RAYDFCGTIEYMAPDIVRGGD---SGHDKAVDWWSLGVLMYELLTG  258 (355)
T ss_dssp             EECCGGGGG---------GGCGGGSCCTTCCHHHHTTCC------CTHHHHHHHHHHHHHHHHS
T ss_pred             eecccCCCC---------cccCcccCcCccChhhhcCCC---CCCCchhhHHHHHHHHHHHHHC
Confidence            865432211         111224566788888765321   2235788999999999999999


No 85 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=7.3e-36  Score=261.71  Aligned_cols=201  Identities=22%  Similarity=0.270  Sum_probs=162.9

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ....+..++|++++.||+|+||.||+|.+..  +..||+|++.......   +.+.+|+++++.++|+||+++++++...
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETT--TEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcC--CCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence            3446777899999999999999999998774  7789999998654333   4578899999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           92 RPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             SSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence            9999999999999999999653 356999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ......         ......++..|++||...     ........|+|+++++++|+.. |
T Consensus       171 ~~~~~~---------~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~~l~t~g  218 (283)
T 3gen_A          171 LDDEYT---------SSVGSKFPVRWSPPEVLM-----YSKFSSKSDIWAFGVLMWEIYSLG  218 (283)
T ss_dssp             CCHHHH---------STTSTTSCGGGCCHHHHH-----HCCCSHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccc---------cccCCccCcccCCHHHhc-----cCCCCchhhHHHHHHHHHHHHhCC
Confidence            432110         011112233466666543     3345678999999999999986 7


No 86 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=3.6e-36  Score=268.92  Aligned_cols=203  Identities=18%  Similarity=0.182  Sum_probs=165.5

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      +..+..++|++++.||+|+||.||+|.+.   ++.||||++....   .......+|+.+++.++||||+++++++....
T Consensus        18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           18 NLYFQSMPLQLLEVKARGRFGCVWKAQLL---NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT   91 (322)
T ss_dssp             CEEETTEEEEEEEEEECSTTCEEEEEEET---TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             ccccchhhchhhheecccCceEEEEEEEC---CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence            34567789999999999999999999765   5899999997542   22344566899999999999999999998743


Q ss_pred             ----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc----------CCeeccCCCCcEEEccCC
Q 042913          174 ----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL----------GIIYRDLKPENILLREDG  239 (317)
Q Consensus       174 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----------~ivHrDikp~Nill~~~~  239 (317)
                          .+|+||||+++|+|.+++..   ..+++..++.++.||+.||.|||+.          ||+||||||+|||++.++
T Consensus        92 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~  168 (322)
T 3soc_A           92 SVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL  168 (322)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred             CCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence                47999999999999999965   4599999999999999999999999          999999999999999999


Q ss_pred             cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .+||+|||+|+.........        ......++..|++||..............+.|+|+++++++|+..|
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg  234 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAG--------DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR  234 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCC--------CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEccCCcccccccccCcc--------ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence            99999999997765433211        1112245667788877654333233445678999999999999998


No 87 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=8.7e-36  Score=264.83  Aligned_cols=206  Identities=19%  Similarity=0.282  Sum_probs=169.3

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL  169 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  169 (317)
                      ...+..++|++.+.||+|+||.||+|.+..    .++..||+|++.... .....+.+.+|+++++.++||||+++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            446677899999999999999999998742    245789999997543 456667899999999999999999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeecc
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQPN----------------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRD  227 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrD  227 (317)
                      ...+..++||||+++++|.+++.....                      ..+++..++.++.||+.||.|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            999999999999999999999976422                      3489999999999999999999999999999


Q ss_pred             CCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccc
Q 042913          228 LKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYS  307 (317)
Q Consensus       228 ikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (317)
                      |||+|||++.++.+||+|||+++...........        ....++..|++||..     .......+.|+|++++++
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il  242 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR--------SQGRIPVKWMAIESL-----FDHIYTTQSDVWSFGVLL  242 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEECS--------SCCCSCGGGCCHHHH-----HHCEECHHHHHHHHHHHH
T ss_pred             cchheEEEcCCCCEEEccccccccccccccceec--------cCCCCcccccChhhh-----cCCCcCchhhHHHHHHHH
Confidence            9999999999999999999999876544322111        111223346666654     334456789999999999


Q ss_pred             cccCC-C
Q 042913          308 VEQPG-G  313 (317)
Q Consensus       308 ~e~~~-G  313 (317)
                      +|+.. |
T Consensus       243 ~el~t~g  249 (314)
T 2ivs_A          243 WEIVTLG  249 (314)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            99997 7


No 88 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.9e-36  Score=265.20  Aligned_cols=198  Identities=20%  Similarity=0.267  Sum_probs=162.6

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI  179 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  179 (317)
                      ++|++++.||+|+||.||+|.+.  +++.||+|++............+.+|+++++.++||||+++++++...+.+++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET--TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcC--CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            68999999999999999999884  5899999999765434444467889999999999999999999999999999999


Q ss_pred             cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913          180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV  259 (317)
Q Consensus       180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~  259 (317)
                      ||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.........
T Consensus        80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  157 (288)
T 1ob3_A           80 EHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY  157 (288)
T ss_dssp             ECCS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EecC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence            9995 5998888654 3668999999999999999999999999999999999999999999999999997654322111


Q ss_pred             ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                                ....++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       158 ----------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~l~~g~~  199 (288)
T 1ob3_A          158 ----------THEIVTLWYRAPDVLMGS----KKYSTTIDIWSVGCIFAEMVNGTP  199 (288)
T ss_dssp             --------------CCCTTCCHHHHTTC----CSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------ccccccccccCchheeCC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence                      112345668888765321    124578999999999999999943


No 89 
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=4.2e-36  Score=272.98  Aligned_cols=200  Identities=18%  Similarity=0.194  Sum_probs=163.4

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEE-----EcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC---CCCcceEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCH-----LRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD---HPFLPTLYA  167 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~  167 (317)
                      .+..++|++.+.||+|+||.||+|.     ... +++.||+|++....     ...+..|+++++.++   |+||+++++
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAK-NKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC--------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccc-cCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            4556889999999999999999995     333 68999999997542     245677888888877   899999999


Q ss_pred             EEEecCEEEEEEcccCCCChhcccccC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------
Q 042913          168 HLEVSHYICFLIDYCPNGDLHSLLPKQ---PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-------  237 (317)
Q Consensus       168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-------  237 (317)
                      ++...+..|+||||+++|+|.+++...   ....+++..++.++.||+.||+|||++||+||||||+||||+.       
T Consensus       135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~  214 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD  214 (365)
T ss_dssp             EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred             eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence            999999999999999999999999642   3467999999999999999999999999999999999999998       


Q ss_pred             ----CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          238 ----DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       238 ----~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                          ++.+||+|||+|+........        .......++.+|++||.....     ......|+|++|++++|+..|
T Consensus       215 ~~~~~~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~elltg  281 (365)
T 3e7e_A          215 EDDLSAGLALIDLGQSIDMKLFPKG--------TIFTAKCETSGFQCVEMLSNK-----PWNYQIDYFGVAATVYCMLFG  281 (365)
T ss_dssp             ----CTTEEECCCTTCEEGGGSCTT--------EEECCSSCTTSCCCHHHHTTC-----CBSTHHHHHHHHHHHHHHHHS
T ss_pred             cccccCCEEEeeCchhhhhhccCCC--------ceeeeecCCCCCCChHHhcCC-----CCCccccHHHHHHHHHHHHhC
Confidence                899999999999754322111        111223466778888766432     346899999999999999999


Q ss_pred             C
Q 042913          314 V  314 (317)
Q Consensus       314 ~  314 (317)
                      -
T Consensus       282 ~  282 (365)
T 3e7e_A          282 T  282 (365)
T ss_dssp             S
T ss_pred             C
Confidence            4


No 90 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=9.8e-36  Score=268.39  Aligned_cols=204  Identities=20%  Similarity=0.250  Sum_probs=165.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~  173 (317)
                      .+..++|++++.||+|+||.||+|.+.  +++.||||++..........+.+.+|+.+++.++|  +||+++++++...+
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~   82 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ   82 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence            355678999999999999999999875  48899999998776667777889999999999986  99999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+|||+. +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+|+...
T Consensus        83 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A           83 YIYMVMECG-NIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             EEEEEECCC-SEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             EEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            999999954 89999999764  6799999999999999999999999999999999999997 6889999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCccccccccc------ceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM------EFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ......        ......++..|++||.......      .........|+|++|++++|+..|
T Consensus       159 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  216 (343)
T 3dbq_A          159 PDTTSV--------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG  216 (343)
T ss_dssp             -------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccc--------cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence            432211        1112246677888887643111      113346789999999999999998


No 91 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.1e-36  Score=281.63  Aligned_cols=203  Identities=17%  Similarity=0.228  Sum_probs=170.4

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ....+...+|++.+.||+|+||.||+|.+.. ++..||||++.....   ..+.+.+|+.+|+.++||||+++++++...
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  288 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE  288 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGG-GTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcC-CCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3456777899999999999999999999886 788999999976532   346788999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ..+|+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       289 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          289 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM  368 (495)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred             CcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence            99999999999999999998765677999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ......  ..       ....+...|++||...     ......+.|+|+++++++|+.. |
T Consensus       369 ~~~~~~--~~-------~~~~~~~~y~aPE~~~-----~~~~~~~sDvwSlG~~l~el~t~g  416 (495)
T 1opk_A          369 TGDTYT--AH-------AGAKFPIKWTAPESLA-----YNKFSIKSDVWAFGVLLWEIATYG  416 (495)
T ss_dssp             TTCCEE--CC-------TTCCCCGGGCCHHHHH-----HCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCcee--ec-------CCCcCCcceeCHhHHh-----cCCCCcHHhHHhHHHHHHHHHhCC
Confidence            432211  00       0112234577777653     3345678999999999999997 6


No 92 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=3.3e-36  Score=268.96  Aligned_cols=208  Identities=22%  Similarity=0.288  Sum_probs=150.3

Q ss_pred             CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCc---eEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEE
Q 042913           92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA---NFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAH  168 (317)
Q Consensus        92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  168 (317)
                      .....+..++|++.+.||+|+||.||+|.+.. ++.   .||+|++..........+.+.+|+++++.++||||++++++
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ-EDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC--------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcc-cCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhce
Confidence            34556777899999999999999999998776 333   79999998765455667889999999999999999999999


Q ss_pred             EEecCEE------EEEEcccCCCChhcccccCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913          169 LEVSHYI------CFLIDYCPNGDLHSLLPKQP----NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED  238 (317)
Q Consensus       169 ~~~~~~~------~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~  238 (317)
                      +......      ++||||+++++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence            9876655      99999999999999985421    2258999999999999999999999999999999999999999


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      +.+||+|||+|+........             ...+...+++.|..++.........++|+|++|++++|+.. |
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g  236 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYY-------------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRG  236 (323)
T ss_dssp             SCEEECCCCC------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCEEEeeccccccccccccc-------------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCC
Confidence            99999999999865443211             11222223334444444444445688999999999999888 6


No 93 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.3e-35  Score=259.45  Aligned_cols=199  Identities=25%  Similarity=0.370  Sum_probs=154.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||+|++....... ...+.+.+|+.+++.++||||+++++++...+..|+
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIH-TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEcc-CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            4789999999999999999998876 78999999997653322 334678999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        89 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             EEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence            99999999999998654 36789999999999999999999999999999999999999999999999999987653321


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..          ....++..|++||....     .......|+|+++++++|+..|.
T Consensus       168 ~~----------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  209 (278)
T 3cok_A          168 KH----------YTLCGTPNYISPEIATR-----SAHGLESDVWSLGCMFYTLLIGR  209 (278)
T ss_dssp             ---------------------------------------CTHHHHHHHHHHHHHHSS
T ss_pred             cc----------eeccCCCCcCCcchhcC-----CCCCchhhHHHHHHHHHHHHhCC
Confidence            11          11234556777776543     34467899999999999999883


No 94 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=1.5e-35  Score=262.06  Aligned_cols=207  Identities=22%  Similarity=0.294  Sum_probs=165.6

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEE---cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHL---RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL  169 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  169 (317)
                      ....+..++|++++.||+|+||.||+|.+   ...+++.||+|++.... .....+.+.+|+++++.++||||+++++++
T Consensus        14 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   92 (302)
T 4e5w_A           14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGIC   92 (302)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            34456678899999999999999999984   23378999999997543 234456789999999999999999999999


Q ss_pred             Eec--CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeec
Q 042913          170 EVS--HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFD  247 (317)
Q Consensus       170 ~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG  247 (317)
                      ...  ..+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        93 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           93 TEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EC---CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             ecCCCceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc
Confidence            876  6789999999999999999554 3568999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +|+...........       .....++..|++||..     .........|+|+++++++|+..|
T Consensus       172 ~~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g  225 (302)
T 4e5w_A          172 LTKAIETDKEYYTV-------KDDRDSPVFWYAPECL-----MQSKFYIASDVWSFGVTLHELLTY  225 (302)
T ss_dssp             TCEECCTTCCEEEC-------CCCTTCCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccCCCcceec-------cCCCCCCccccCCeee-----cCCCCCcchhHHHHHHHHHHHHHc
Confidence            99877654322111       1112333446666654     333455789999999999999988


No 95 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=9.4e-36  Score=260.58  Aligned_cols=199  Identities=24%  Similarity=0.349  Sum_probs=166.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .+..++|++.+.||+|+||.||+|.+.. ++..||+|++....... .....+.+|+.+++.++||||+++++++...+.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   83 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR   83 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEcc-CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE
Confidence            4667899999999999999999999887 78899999997654332 335678899999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             EEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            99999999999999998653  5689999999999999999999999999999999999999999999999999865433


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...            ....++..|++||....     .......|+|+++++++|+..|.
T Consensus       162 ~~~------------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  204 (279)
T 3fdn_A          162 SRR------------TDLCGTLDYLPPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGK  204 (279)
T ss_dssp             ------------------CCCCTTCCHHHHTT-----CCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccc------------cccCCCCCccCHhHhcc-----CCCCccchhHhHHHHHHHHHHCC
Confidence            221            11234556777776533     34457899999999999999983


No 96 
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=5e-36  Score=275.53  Aligned_cols=205  Identities=19%  Similarity=0.230  Sum_probs=166.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC--
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH--  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--  173 (317)
                      ....++|++.+.||+|+||.||+|.+.. +++.||||++..... ....+.+.+|+++++.++||||+++++++...+  
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~   82 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKK-TGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR   82 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECC-CCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC
Confidence            3456899999999999999999999887 789999999976432 233466788999999999999999999998655  


Q ss_pred             EEEEEEcccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeecc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL----REDGHIMLSDFDL  248 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill----~~~~~~kl~DFG~  248 (317)
                      ..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            7899999999999999997542 2338999999999999999999999999999999999999    7777899999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccc---eeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME---FVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |+........           ....++..|++||........   ........|+|++|++++|+..|
T Consensus       163 a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg  219 (396)
T 4eut_A          163 ARELEDDEQF-----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG  219 (396)
T ss_dssp             CEECCCGGGS-----------SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ceEccCCCcc-----------ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHC
Confidence            9876443211           112456667777765432211   13446789999999999999999


No 97 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.1e-35  Score=265.61  Aligned_cols=197  Identities=22%  Similarity=0.294  Sum_probs=165.6

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++.......    ...+.+.+|+.+++.++||||+++++++...+
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECC-CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            45789999999999999999999887 78999999997653221    13467889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeeccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG----HIMLSDFDLC  249 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~----~~kl~DFG~a  249 (317)
                      .+++||||+++++|.+++..  ...+++..++.++.||+.||.|||+.||+||||||+|||++.++    .+||+|||++
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             EEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            99999999999999999965  46789999999999999999999999999999999999999887    7999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +........           ....++..|++||..     .........|+|+++++++|+..|
T Consensus       167 ~~~~~~~~~-----------~~~~gt~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g  214 (321)
T 2a2a_A          167 HEIEDGVEF-----------KNIFGTPEFVAPEIV-----NYEPLGLEADMWSIGVITYILLSG  214 (321)
T ss_dssp             EECCTTCCC-----------CCCCSCGGGCCHHHH-----TTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eecCccccc-----------cccCCCCCccCcccc-----cCCCCCCccccHHHHHHHHHHHHC
Confidence            876543211           111344456666654     334456789999999999999998


No 98 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=4.7e-36  Score=273.57  Aligned_cols=207  Identities=22%  Similarity=0.268  Sum_probs=160.2

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++.+.||+|+||.||+|.+..  ..+..||||++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus        40 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  118 (373)
T 2qol_A           40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS  118 (373)
T ss_dssp             CBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             hhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            35677899999999999999999998762  256789999997653 455667899999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            9999999999999999999754 456999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      ........+..       ...++..|++||....     .....+.|+|++|++++|+.. | .|
T Consensus       198 ~~~~~~~~~~~-------~~~~~~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~ellt~g~~P  250 (373)
T 2qol_A          198 EDDPEAAYTTR-------GGKIPIRWTSPEAIAY-----RKFTSASDVWSYGIVLWEVMSYGERP  250 (373)
T ss_dssp             -----------------------CTTSCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred             ccCCccceecc-------CCCcCCCccChhhhcc-----CCcCchhcHHHHHHHHHHHHhCCCCC
Confidence            54332211111       1122345777776543     334578999999999999775 6 44


No 99 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.4e-35  Score=265.04  Aligned_cols=199  Identities=21%  Similarity=0.300  Sum_probs=169.4

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++..... .....+.+.+|+.+++.++|+||+++++++...+.+|
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDAD-TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            45789999999999999999999887 789999999976532 3456678899999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      +||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       118 lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            999999999999998653  568999999999999999999999999999999999999999999999999998764332


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..          .....++..|++||....     .......|+|+++++++|+..|.
T Consensus       196 ~~----------~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  238 (335)
T 2owb_A          196 ER----------KKVLCGTPNYIAPEVLSK-----KGHSFEVDVWSIGCIMYTLLVGK  238 (335)
T ss_dssp             CC----------BCCCCSCCSSCCHHHHHT-----SCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cc----------ccccCCCccccCHHHhcc-----CCCCchhhHHHHHHHHHHHHHCc
Confidence            21          111245556777776543     33467899999999999999983


No 100
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.2e-35  Score=279.93  Aligned_cols=197  Identities=27%  Similarity=0.381  Sum_probs=166.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++............+.+|+++++.++||||+++++++.....+|+
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETT-TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECC-CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            35789999999999999999999887 78999999997654444456778999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc---cCCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR---EDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~---~~~~~kl~DFG~a~~~~~  254 (317)
                      ||||+.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|+....
T Consensus        99 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence            99999999999988653  5799999999999999999999999999999999999995   456899999999986644


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ....           ....++..|++||.....      .....|+|++|++++|+..|.
T Consensus       177 ~~~~-----------~~~~gt~~y~aPE~~~~~------~~~~~DiwslG~il~~ll~g~  219 (486)
T 3mwu_A          177 NTKM-----------KDRIGTAYYIAPEVLRGT------YDEKCDVWSAGVILYILLSGT  219 (486)
T ss_dssp             C---------------CCTTGGGGCCGGGGGSC------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcc-----------CCCcCCCCCCCHHHhCCC------CCchhhHHHHHHHHHHHHhCC
Confidence            3211           112455667777765432      456899999999999999993


No 101
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=8.5e-36  Score=268.24  Aligned_cols=205  Identities=21%  Similarity=0.272  Sum_probs=168.4

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      .+..++|++++.||+|+||.||+|.+..    .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            5667899999999999999999998874    245899999997653 44556789999999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCC
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQP----------------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLK  229 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDik  229 (317)
                      .+..|+||||+++++|.+++....                      ...+++..++.++.||+.||.|||++||+|||||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999999999999999999987642                      1568999999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccc
Q 042913          230 PENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVE  309 (317)
Q Consensus       230 p~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e  309 (317)
                      |+|||++.++.+||+|||+++.........        ......++..|++||...     ......+.|+|+++++++|
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~e  268 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYK--------ADGNDAIPIRWMPPESIF-----YNRYTTESDVWAYGVVLWE  268 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC------------CCBCGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHH
T ss_pred             cceEEECCCCeEEEeecCCCcccccCcccc--------ccCCCcccceecChhhhc-----cCCcCcccccHHHHHHHHH
Confidence            999999999999999999997654322110        011123344567776543     3345678999999999999


Q ss_pred             cCC-CC
Q 042913          310 QPG-GV  314 (317)
Q Consensus       310 ~~~-G~  314 (317)
                      +.. |.
T Consensus       269 l~t~g~  274 (343)
T 1luf_A          269 IFSYGL  274 (343)
T ss_dssp             HHTTTC
T ss_pred             HHhcCC
Confidence            997 73


No 102
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=2.2e-35  Score=257.59  Aligned_cols=203  Identities=20%  Similarity=0.336  Sum_probs=165.0

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      ..+.+..++|++.+.||+|+||.||+|.+.. +++.||+|++....... ...+.+.+|+.+++.++||||+++++++..
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   82 (276)
T 2h6d_A            4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST   82 (276)
T ss_dssp             ---CCEETTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             ccCcceeccEEEEeeecCCCCeEEEEEEECC-CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            3567788999999999999999999999876 78999999997653222 345678899999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  160 (276)
T 2h6d_A           83 PTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM  160 (276)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccc
Confidence            99999999999999999999653  5689999999999999999999999999999999999999999999999999977


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .......           ....++..|++||......    ......|+|+++++++|+..|
T Consensus       161 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~----~~~~~~Di~slG~~l~~l~~g  207 (276)
T 2h6d_A          161 MSDGEFL-----------RTSCGSPNYAAPEVISGRL----YAGPEVDIWSCGVILYALLCG  207 (276)
T ss_dssp             CCC------------------------CCTGGGTTSC----CCHHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCcce-----------ecccCCccccCHHHHcCCC----CCCccchHHHHHHHHHHHHhC
Confidence            6432211           1123455677777654321    125789999999999999998


No 103
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.6e-35  Score=263.11  Aligned_cols=204  Identities=17%  Similarity=0.236  Sum_probs=164.0

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ...+..++|++.+.||+|+||.||+|.+.    ..+++|+++.........+.+.+|+++++.++||||+++++++. .+
T Consensus        30 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~  104 (307)
T 3lb7_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KD  104 (307)
T ss_dssp             CCBCCTTSCCEEEEEEECSSCEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             eEEecccceEEEeEecCCCCeEEEEEEEC----CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cC
Confidence            34677889999999999999999999754    35899998766556677788999999999999999999999875 45


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...
T Consensus       105 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~  183 (307)
T 3lb7_A          105 NLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred             cEEEEEecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence            589999999999999998644 4679999999999999999999999999999999999999999999999999997543


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....        .......++..|++||.....  .......+.|+|+++++++|+..|
T Consensus       184 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~Di~slG~il~elltg  233 (307)
T 3lb7_A          184 RWSGS--------QQVEQPTGSVLWMAPEVIRMQ--DNNPFSFQSDVYSYGIVLYELMTG  233 (307)
T ss_dssp             ------------------CCCCTTSCCHHHHHCC--SSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccccc--------ccccCCCCCcceECcceeecc--CCCCCCchhhHHHHHHHHHHHHhC
Confidence            21110        111122456677777765311  122345789999999999999998


No 104
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.1e-35  Score=269.14  Aligned_cols=204  Identities=21%  Similarity=0.272  Sum_probs=165.4

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  170 (317)
                      .+..++|++.+.||+|+||.||+|.+.    ..+++.||||++.... .....+.+.+|+++++.+ +||||+++++++.
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~   96 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT   96 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence            456789999999999999999999853    2366899999997643 445567889999999999 7899999999988


Q ss_pred             ecC-EEEEEEcccCCCChhcccccCCC-----------------------------------------------------
Q 042913          171 VSH-YICFLIDYCPNGDLHSLLPKQPN-----------------------------------------------------  196 (317)
Q Consensus       171 ~~~-~~~lv~e~~~~gsL~~~l~~~~~-----------------------------------------------------  196 (317)
                      ..+ .+++||||+++|+|.+++.....                                                     
T Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (359)
T 3vhe_A           97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV  176 (359)
T ss_dssp             STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence            754 48999999999999999876432                                                     


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCeeeccccc
Q 042913          197 -----------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGS  265 (317)
Q Consensus       197 -----------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  265 (317)
                                 ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..........     
T Consensus       177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~-----  251 (359)
T 3vhe_A          177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR-----  251 (359)
T ss_dssp             -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE-----
T ss_pred             hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh-----
Confidence                       1289999999999999999999999999999999999999999999999999986644332111     


Q ss_pred             ccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          266 ATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       266 ~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                         .....++..|++||....     .......|+|+++++++|+.. |
T Consensus       252 ---~~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~ellt~g  292 (359)
T 3vhe_A          252 ---KGDARLPLKWMAPETIFD-----RVYTIQSDVWSFGVLLWEIFSLG  292 (359)
T ss_dssp             ---C--CEECGGGCCHHHHHH-----CCCCHHHHHHHHHHHHHHHTTTS
T ss_pred             ---ccccCCCceeEChhhhcC-----CCCCchhhhhhHHHHHHHHHhcC
Confidence               111234456777776542     334578999999999999997 7


No 105
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.1e-35  Score=266.18  Aligned_cols=191  Identities=19%  Similarity=0.294  Sum_probs=149.5

Q ss_pred             CCeEEe---eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEE
Q 042913          100 RHLKLV---RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYI  175 (317)
Q Consensus       100 ~~y~i~---~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~  175 (317)
                      ++|.+.   +.||+|+||.||+|.+.. +++.||||++...     ....+.+|+.+++.+. ||||+++++++.+....
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~   81 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKK-SNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT   81 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETT-TCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hccccccCCCccccCCCeEEEEEEECC-CCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence            456664   779999999999999887 7899999999754     2356778999999997 99999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeecccccC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIMLSDFDLCFQS  252 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl~DFG~a~~~  252 (317)
                      |+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||+|+..
T Consensus        82 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             EEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred             EEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence            9999999999999999764  6799999999999999999999999999999999999998765   8999999999865


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........+          ..++..|++||...     ........|+|++|++++|+..|
T Consensus       160 ~~~~~~~~~----------~~~t~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g  205 (325)
T 3kn6_A          160 PPDNQPLKT----------PCFTLHYAAPELLN-----QNGYDESCDLWSLGVILYTMLSG  205 (325)
T ss_dssp             CC-------------------------------------CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcccc----------cCCCcCccCHHHhc-----CCCCCCccchHHHHHHHHHHHhC
Confidence            543322111          13355677777653     33456789999999999999998


No 106
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1e-35  Score=266.55  Aligned_cols=203  Identities=21%  Similarity=0.248  Sum_probs=166.3

Q ss_pred             CCccccCCeEEe-eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEe
Q 042913           94 NGKLHLRHLKLV-RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEV  171 (317)
Q Consensus        94 ~~~~~~~~y~i~-~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~  171 (317)
                      ......++|.+. +.||+|+||.||+|.+.. +++.||+|++............+.+|+.+++.+. ||||+++++++..
T Consensus        22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           22 SMENFNNFYILTSKELGRGKFAVVRQCISKS-TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             CHHHHHHHEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             HHHhhhhEEeeccceeCCCCCeEEEEEEECC-CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence            334455778887 899999999999999887 7899999999865444444567889999999995 6999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDL  248 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~  248 (317)
                      .+.+++||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            999999999999999999997665678999999999999999999999999999999999999987   78999999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |+........           ....++..|++||..     .......+.|+|+++++++|+..|
T Consensus       181 a~~~~~~~~~-----------~~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~~ll~g  229 (327)
T 3lm5_A          181 SRKIGHACEL-----------REIMGTPEYLAPEIL-----NYDPITTATDMWNIGIIAYMLLTH  229 (327)
T ss_dssp             CEEC--------------------CCCGGGCCHHHH-----TTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccCCcccc-----------ccccCCcCccCCeee-----cCCCCCchhhHHHHHHHHHHHHhC
Confidence            9876432211           112344556666654     334456789999999999999998


No 107
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.9e-35  Score=262.73  Aligned_cols=200  Identities=21%  Similarity=0.213  Sum_probs=159.6

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++..... .....+.+.+|+.+++.++||||+++++++..++.+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTV-RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL  109 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETT-TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcC-CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence            456899999999999999999999876 789999999976543 345567889999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       110 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          110 YVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9999999999999999653  56999999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...         ......++..|++||....     .......|+|+++++++|+..|
T Consensus       188 ~~~---------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g  231 (309)
T 2h34_A          188 KLT---------QLGNTVGTLYYMAPERFSE-----SHATYRADIYALTCVLYECLTG  231 (309)
T ss_dssp             ------------------CCGGGCCGGGTCC---------CCCHHHHHHHHHHHHHHS
T ss_pred             ccc---------cccccCCCcCccCHHHHcC-----CCCCchHhHHHHHHHHHHHHHC
Confidence            211         0111234555677765543     3445688999999999999998


No 108
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=3.7e-35  Score=258.71  Aligned_cols=200  Identities=21%  Similarity=0.295  Sum_probs=169.7

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++..... .....+.+.+|+.+++.++|+||+++++++...+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   90 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDAD-TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV   90 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECC-CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence            345789999999999999999999887 789999999976543 345667889999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        91 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           91 FVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            9999999999999998653  56899999999999999999999999999999999999999999999999999876432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...          .....++..|++||....     .......|+|+++++++|+..|.
T Consensus       169 ~~~----------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~~l~~g~  212 (294)
T 2rku_A          169 GER----------KKVLCGTPNYIAPEVLSK-----KGHSFEVDVWSIGCIMYTLLVGK  212 (294)
T ss_dssp             TCC----------BCCCCSCCSSCCHHHHTT-----SCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccc----------cccccCCCCcCCcchhcc-----CCCCchhhHHHHHHHHHHHHhCC
Confidence            221          111245566777776543     33467899999999999999883


No 109
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=8.3e-36  Score=268.81  Aligned_cols=193  Identities=23%  Similarity=0.283  Sum_probs=159.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  176 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||||++.+...      ...+|++++..+ +||||+++++++.+.+.+|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~   92 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKA-TNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY   92 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence            45789999999999999999999887 889999999976532      235688888887 7999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC----CcEEEeeecccccC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED----GHIMLSDFDLCFQS  252 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~----~~~kl~DFG~a~~~  252 (317)
                      +||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+..+    +.+||+|||+|+..
T Consensus        93 lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           93 VVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            999999999999999653  679999999999999999999999999999999999998543    35999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ........+          ..++..|++||...     ........|+|++|++++|+..|.
T Consensus       171 ~~~~~~~~~----------~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~  217 (342)
T 2qr7_A          171 RAENGLLMT----------PCYTANFVAPEVLE-----RQGYDAACDIWSLGVLLYTMLTGY  217 (342)
T ss_dssp             BCTTCCBCC----------SSCCSSCCCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCceec----------cCCCccccCHHHhc-----CCCCCCccCeeeHhHHHHHHhcCC
Confidence            543322221          13345567776543     333457899999999999999993


No 110
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.2e-35  Score=261.48  Aligned_cols=207  Identities=17%  Similarity=0.254  Sum_probs=159.3

Q ss_pred             cCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           91 LSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        91 ~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      .+..+++..++|++.+.||+|+||.||+|.+.    ..||+|++..........+.+.+|+++++.++||||++++++. 
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-   89 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-   89 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-
Confidence            35667888999999999999999999999754    3599999987666677778899999999999999999999965 


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      .....++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  168 (289)
T 3og7_A           90 TAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT  168 (289)
T ss_dssp             CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---
T ss_pred             cCCccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecc
Confidence            456689999999999999998654 4668999999999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........        .......++..|++||.....  .........|+|+++++++|+..|
T Consensus       169 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~Di~slG~il~el~~g  221 (289)
T 3og7_A          169 EKSRWSGS--------HQFEQLSGSILWMAPEVIRMQ--DSNPYSFQSDVYAFGIVLYELMTG  221 (289)
T ss_dssp             -----------------------CCCTTCCHHHHC------CCSCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccc--------ccccccCCCccccCchhhccc--CCCCCCcccchHHHHHHHHHHHHC
Confidence            55432111        111122456677777765311  122345689999999999999988


No 111
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.4e-35  Score=265.71  Aligned_cols=202  Identities=18%  Similarity=0.219  Sum_probs=157.8

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCce----EEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSAN----FALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|++++.||+|+||.||+|.+.. +++.    ||+|.+.... .....+.+.+|+.+++.++||||+++++++.
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   87 (327)
T 3poz_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICL   87 (327)
T ss_dssp             EECCGGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEE
T ss_pred             hhcCHHHcccceEEeeCCCeEEEEEEEcC-CCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe
Confidence            35667899999999999999999998865 4544    5777765432 3345578899999999999999999999998


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ... .++|+||+.+|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        88 ~~~-~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A           88 TST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             SSS-EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             cCC-eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCccee
Confidence            755 78899999999999999764 3569999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...........        ....++..|++||...     ......+.|+|+++++++|+.. |
T Consensus       166 ~~~~~~~~~~~--------~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~ellt~g  216 (327)
T 3poz_A          166 LLGAEEKEYHA--------EGGKVPIKWMALESIL-----HRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             HHTTTCC---------------CCCGGGSCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             EccCCcccccc--------cCCCccccccChHHhc-----cCCCCchhhhhhhHHHHHHHHhcC
Confidence            76543322111        1112334567777654     3345678999999999999987 7


No 112
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=6.2e-36  Score=262.82  Aligned_cols=196  Identities=18%  Similarity=0.169  Sum_probs=165.2

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCC-------ceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTS-------ANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAH  168 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  168 (317)
                      .+..++|++.+.||+|+||.||+|.+.. ++       ..||+|++...  .....+.+.+|+++++.++||||++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRRE-VGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEE-ECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEec-ccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            4567899999999999999999998876 44       46999998654  33445678999999999999999999999


Q ss_pred             EEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--------
Q 042913          169 LEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH--------  240 (317)
Q Consensus       169 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~--------  240 (317)
                      +...+..++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.        
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence            99999999999999999999999764 344899999999999999999999999999999999999998887        


Q ss_pred             EEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          241 IMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       241 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +||+|||++........              ..++..|++||....    ........|+|+++++++|+..|
T Consensus       160 ~kl~Dfg~~~~~~~~~~--------------~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~il~el~~g  214 (289)
T 4fvq_A          160 IKLSDPGISITVLPKDI--------------LQERIPWVPPECIEN----PKNLNLATDKWSFGTTLWEICSG  214 (289)
T ss_dssp             EEECCCCSCTTTSCHHH--------------HHHTTTTSCHHHHHC----GGGCCHHHHHHHHHHHHHHHHTT
T ss_pred             eeeccCcccccccCccc--------------cCCcCcccCHHHhCC----CCCCCchhHHHHHHHHHHHHHcC
Confidence            99999999876533211              123456888886643    12346789999999999999986


No 113
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=5.3e-36  Score=273.62  Aligned_cols=203  Identities=21%  Similarity=0.268  Sum_probs=168.0

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ..+..++|++.+.||+|+||.||+|.+.. +++.||||++.... .......+.+|+++++.++||||+++++++...+.
T Consensus       109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRA-DNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cEEchHHeEEeeEeccCCCCeEEEEEEec-CCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            35667899999999999999999999886 78999999987542 44555678899999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      +|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            99999999999999999653 34589999999999999999999999999999999999999999999999999986433


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...  ....      ....+...|++||...     ........|+|++|++++|+.. |
T Consensus       266 ~~~--~~~~------~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~t~g  312 (377)
T 3cbl_A          266 GVY--AASG------GLRQVPVKWTAPEALN-----YGRYSSESDVWSFGILLWETFSLG  312 (377)
T ss_dssp             SEE--ECCS------SCCEEEGGGSCHHHHH-----HCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             Cce--eecC------CCCCCCcCcCCHhHhc-----cCCCCchhhHHHHHHHHHHHHhCC
Confidence            211  1000      0112233577777653     2334678999999999999986 6


No 114
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.8e-35  Score=259.21  Aligned_cols=203  Identities=19%  Similarity=0.251  Sum_probs=155.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++.+.||+|+||.||+|.+...  .+..||+|++.... .....+.+.+|+.+++.++||||+++++++. +
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   87 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   87 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-c
Confidence            456778999999999999999999988642  34579999986542 4456678899999999999999999999985 5


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           88 NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             CccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccccc
Confidence            6789999999999999999754 356899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~  314 (317)
                      .......         .....++..|++||..     .........|+|+++++++|+.. |.
T Consensus       167 ~~~~~~~---------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~~l~ell~~g~  215 (281)
T 1mp8_A          167 EDSTYYK---------ASKGKLPIKWMAPESI-----NFRRFTSASDVWMFGVCMWEILMHGV  215 (281)
T ss_dssp             ---------------------CCGGGCCHHHH-----HHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             Ccccccc---------cccCCCcccccChhhc-----ccCCCCCccCchHHHHHHHHHHhcCC
Confidence            4332110         0111223346666654     33445678999999999999874 73


No 115
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=2.2e-35  Score=264.68  Aligned_cols=200  Identities=20%  Similarity=0.229  Sum_probs=165.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++||||+++++++...+..|+
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  101 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKD-TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL  101 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETT-TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECC-CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence            45899999999999999999999887 78999999997765566666778899999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus       102 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          102 VFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EEECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EEecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            9999998888888644  35699999999999999999999999999999999999999999999999999976544332


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...          ...++..|++||.....    .......|+|+++++++|+..|-
T Consensus       180 ~~~----------~~~~t~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~g~  222 (331)
T 4aaa_A          180 VYD----------DEVATRWYRAPELLVGD----VKYGKAVDVWAIGCLVTEMFMGE  222 (331)
T ss_dssp             --------------CCCCCTTCCHHHHTTC----TTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccC----------CCcCCccccCcccccCC----CCcchHHHHHHHHHHHHHHHhCC
Confidence            111          12355668888866432    12357899999999999999994


No 116
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=2.4e-35  Score=257.64  Aligned_cols=193  Identities=23%  Similarity=0.319  Sum_probs=165.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++.+.||+|+||.||+|.+.. ++..||+|++.....  ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKG-TRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV   84 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCC-CCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence            4689999999999999999999887 788999999976532  3346788999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccCCCC
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           85 MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            9999999999988653  668999999999999999999999999999999999999   78889999999999776543


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...           ....++..|++||.....      ...+.|+|+++++++|+..|
T Consensus       163 ~~~-----------~~~~~t~~y~aPE~~~~~------~~~~~Di~slG~~l~~l~~g  203 (277)
T 3f3z_A          163 KMM-----------RTKVGTPYYVSPQVLEGL------YGPECDEWSAGVMMYVLLCG  203 (277)
T ss_dssp             SCB-----------CCCCSCTTTCCHHHHTTC------BCTTHHHHHHHHHHHHHHHS
T ss_pred             cch-----------hccCCCCCccChHHhccc------CCchhhehhHHHHHHHHHHC
Confidence            211           112456678888866432      45689999999999999998


No 117
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=4.8e-36  Score=272.95  Aligned_cols=205  Identities=19%  Similarity=0.185  Sum_probs=163.7

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|++++.||+|+||.||+|.+..    .+++.||||++.... .......+.+|+.+++.++||||+++++++.
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~  144 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL  144 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            35667899999999999999999998542    257789999996532 3455567889999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEE
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQP-----NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIM  242 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~k  242 (317)
                      .....|+||||+++|+|.+++....     ...+++..++.++.||+.||.|||++||+||||||+|||++.++   .+|
T Consensus       145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence            9999999999999999999986532     24589999999999999999999999999999999999999555   599


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      |+|||+|+........        .......++..|++||...     ......+.|+|++|++++|+.. |
T Consensus       225 L~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslG~il~ellt~g  283 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYY--------RKGGCAMLPVKWMPPEAFM-----EGIFTSKTDTWSFGVLLWEIFSLG  283 (367)
T ss_dssp             ECCCHHHHHHHHHSSC--------TTCCGGGSCGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ECCCcccccccccccc--------ccCCCcCCcccEECHHHhc-----CCCCCcHHHHHHHHHHHHHHHhCC
Confidence            9999999754321111        0011112334566666543     3345678999999999999986 7


No 118
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.7e-35  Score=269.03  Aligned_cols=209  Identities=21%  Similarity=0.252  Sum_probs=159.9

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHH-H--------HHHHHHHHHHHHhcCCCCcc
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAK-K--------LSHVQMEAEILSMLDHPFLP  163 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~-~--------~~~~~~E~~~l~~l~h~~iv  163 (317)
                      +..++|++++.||+|+||.||+|.+...    .++.||||++........ .        ...+..|+..++.++|+||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            3456999999999999999999988752    258899999876531110 0        11233456667778899999


Q ss_pred             eEEEEEEec----CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc--c
Q 042913          164 TLYAHLEVS----HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR--E  237 (317)
Q Consensus       164 ~~~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~--~  237 (317)
                      ++++++...    ...|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++  .
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            999998764    5689999999 99999999764 46799999999999999999999999999999999999999  8


Q ss_pred             CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ++.+||+|||+|+.+.........   .........++..|++||...     ......++|+|+++++++|+..| .|
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~P  260 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAY---AADPKRCHDGTIEFTSIDAHN-----GVAPSRRGDLEILGYCMIQWLTGHLP  260 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCS---SCCSSCCCCCCTTTCCHHHHT-----TCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             CCeEEEEECCcceecccCCccccc---ccCcccccCCCCCccCHHHhC-----CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            899999999999876543221110   001111223556667776553     33457899999999999999999 44


No 119
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=6.1e-36  Score=266.88  Aligned_cols=199  Identities=21%  Similarity=0.287  Sum_probs=150.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++.... .......+.+|+++++.++||||+++++++..++.+|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   81 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT-TGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV   81 (317)
T ss_dssp             ---------------CEEEEEECSS-SCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC-CCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence            4689999999999999999998876 78999999997543 222335678899999999999999999999999999999


Q ss_pred             EcccCCCChhcccccC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          179 IDYCPNGDLHSLLPKQ----PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      |||++ ++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI  160 (317)
T ss_dssp             EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred             EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence            99996 6999887542    124589999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....          ....++..|++||.....    .......|+|++|++++|+..|.
T Consensus       161 ~~~~~----------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~el~~g~  206 (317)
T 2pmi_A          161 PVNTF----------SSEVVTLWYRAPDVLMGS----RTYSTSIDIWSCGCILAEMITGK  206 (317)
T ss_dssp             CCCCC----------CCCCSCCTTCCHHHHTTC----CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccC----------CCCcccccccCchHhhCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence            32211          112445667888765321    12457899999999999999994


No 120
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=5.1e-35  Score=262.65  Aligned_cols=205  Identities=19%  Similarity=0.272  Sum_probs=166.3

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYA  167 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  167 (317)
                      ..+..++|++.+.||+|+||.||+|.+..      .++..||+|++.... .......+.+|+++++.+ +||||+++++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  108 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG  108 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence            45667899999999999999999998752      256789999997653 445667899999999999 8999999999


Q ss_pred             EEEecCEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913          168 HLEVSHYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI  233 (317)
Q Consensus       168 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni  233 (317)
                      ++...+.+|+||||+++++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            9999999999999999999999997542              23489999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-
Q 042913          234 LLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-  312 (317)
Q Consensus       234 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-  312 (317)
                      |++.++.+||+|||+++............        ...++..|++||...     ......+.|+|+++++++|+.. 
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~--------~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~ellt~  255 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTT--------NGRLPVKWMAPEALF-----DRVYTHQSDVWSFGVLMWEIFTL  255 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCS--------CCCCCGGGCCHHHHH-----HCEECHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCCCEEEccccccccccccccccccC--------CCCcccceeChHHhc-----CCCcChHHHHHHHHHHHHHHHhC
Confidence            99999999999999998765433221111        112233466666543     3345688999999999999987 


Q ss_pred             C
Q 042913          313 G  313 (317)
Q Consensus       313 G  313 (317)
                      |
T Consensus       256 g  256 (334)
T 2pvf_A          256 G  256 (334)
T ss_dssp             S
T ss_pred             C
Confidence            6


No 121
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-35  Score=270.09  Aligned_cols=195  Identities=22%  Similarity=0.262  Sum_probs=159.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------  172 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------  172 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||||++..........+++.+|+++++.++||||+++++++...      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETT-TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECC-CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            5789999999999999999999877 899999999977655666778899999999999999999999999765      


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ..+|+||||+ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            3469999999 8999999865   46899999999999999999999999999999999999999999999999999875


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +....             ...++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       179 ~~~~~-------------~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~ell~g~~  224 (367)
T 1cm8_A          179 DSEMT-------------GYVVTRWYRAPEVILNW----MRYTQTVDIWSVGCIMAEMITGKT  224 (367)
T ss_dssp             CSSCC-------------SSCSCGGGCCTHHHHTT----TCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ccccC-------------cCcCCCCcCCHHHHhCC----CCCChhhhHHHHHHHHHHHHhCCC
Confidence            43211             11344557777755321    234678999999999999999943


No 122
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=4.6e-35  Score=262.13  Aligned_cols=203  Identities=23%  Similarity=0.310  Sum_probs=167.0

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEE---cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE--
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHL---RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE--  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--  170 (317)
                      .+..++|++++.||+|+||.||+|.+   ...+++.||+|++...  .....+.+.+|+++++.++|+||+++++++.  
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            46678999999999999999999985   2337889999999765  4455677899999999999999999999886  


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ....+|+||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             CCceEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccce
Confidence            557799999999999999999653 2458999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...........       .....++..|++||...     ........|+|+++++++|+..|
T Consensus       176 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~ll~g  226 (327)
T 3lxl_A          176 LLPLDKDYYVV-------REPGQSPIFWYAPESLS-----DNIFSRQSDVWSFGVVLYELFTY  226 (327)
T ss_dssp             ECCTTCSEEEC-------SSCCCSCGGGSCHHHHH-----HCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             ecccCCcccee-------eccCCccccccCHHHhc-----cCCCChHHhHHHHHHHHHHHHhC
Confidence            76543322111       11123344466666543     33446789999999999999988


No 123
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.3e-35  Score=267.33  Aligned_cols=205  Identities=22%  Similarity=0.299  Sum_probs=161.9

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh---cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL---SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++.....   .....+.+.+|+++++.++||||+++++++...+..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  103 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQ-TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI  103 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhheeecceeeecCCeEEEEEEECC-CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence            4789999999999999999998877 789999999976532   234567899999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHH
Q 042913          176 CFLIDYCPNGDLHSLLPKQ--------------------------------------PNNRFSLQAVRFFAAEVLVGLEY  217 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~--------------------------------------~~~~~~~~~~~~i~~qi~~al~~  217 (317)
                      ++||||+++++|.+++...                                      ....+++..++.++.||+.||.|
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  183 (345)
T 3hko_A          104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY  183 (345)
T ss_dssp             EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence            9999999999999988521                                      01224677888999999999999


Q ss_pred             HHHcCCeeccCCCCcEEEccCC--cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccc
Q 042913          218 LHALGIIYRDLKPENILLREDG--HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEP  295 (317)
Q Consensus       218 LH~~~ivHrDikp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~  295 (317)
                      ||++||+||||||+|||++.++  .+||+|||+|+.+........      .......++..|++||......   ....
T Consensus       184 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~~~~  254 (345)
T 3hko_A          184 LHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY------YGMTTKAGTPYFVAPEVLNTTN---ESYG  254 (345)
T ss_dssp             HHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------------CCCGGGCCHHHHTCSS---SCCC
T ss_pred             HHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccc------ccccccCCCccccCchhhccCC---CCCC
Confidence            9999999999999999998766  899999999976543221100      1111224555677777653211   2235


Q ss_pred             hhhhccCCcccccccCCC
Q 042913          296 RREQREHPAQYSVEQPGG  313 (317)
Q Consensus       296 ~~~~~~~~~~~~~e~~~G  313 (317)
                      ...|+|++|++++|+..|
T Consensus       255 ~~~DiwslG~il~el~~g  272 (345)
T 3hko_A          255 PKCDAWSAGVLLHLLLMG  272 (345)
T ss_dssp             THHHHHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHC
Confidence            689999999999999998


No 124
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=7.5e-36  Score=267.66  Aligned_cols=201  Identities=18%  Similarity=0.238  Sum_probs=158.6

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||||++............+.+|+++++.++||||+++++++..++.+|
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTV-TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETT-TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECC-CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            456789999999999999999998887 7999999999766545555677889999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-----cCCcEEEeeeccccc
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-----EDGHIMLSDFDLCFQ  251 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-----~~~~~kl~DFG~a~~  251 (317)
                      +||||++ ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||+|+.
T Consensus       110 lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            9999995 6999999664  5699999999999999999999999999999999999994     455699999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ........          ....++..|++||.....    .......|+|+++++++|+..|-|
T Consensus       187 ~~~~~~~~----------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~ell~g~~  236 (329)
T 3gbz_A          187 FGIPIRQF----------THEIITLWYRPPEILLGS----RHYSTSVDIWSIACIWAEMLMKTP  236 (329)
T ss_dssp             HC---------------------CCTTCCHHHHTTC----CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCccccc----------CCCcCCccccCHHHhcCC----CCCCcHHHHHHHHHHHHHHHHCCC
Confidence            64332211          112345667777765321    124678999999999999998843


No 125
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-35  Score=259.57  Aligned_cols=198  Identities=23%  Similarity=0.364  Sum_probs=148.4

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||+|++....... .....+.+|+.+++.++||||+++++++...+..
T Consensus        10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   88 (275)
T 2eue_A           10 AHIGNYQIVKTLGEGSFAKVKLAYHTT-TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             CBCCCBCCCC---------EEEEECTT-TCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             CcccceEEEEEEEcCCCEEEEEEEECC-CCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeE
Confidence            456789999999999999999998776 78999999997654332 4456788999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        89 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  165 (275)
T 2eue_A           89 IMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             EEEEECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred             EEEehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence            9999999 88888888553  56999999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...           ....++..|++||......    ......|+|+++++++|+..|
T Consensus       166 ~~~-----------~~~~~t~~y~aPE~~~~~~----~~~~~~Di~slG~il~~l~~g  208 (275)
T 2eue_A          166 NFL-----------KTSCGSPNYAAPEVISGKL----YAGPEVDVWSCGVILYVMLCR  208 (275)
T ss_dssp             --------------------CTTCCHHHHCC---------THHHHHHHHHHHHHHHHS
T ss_pred             ccc-----------cCCCCCcCcCCceeeeCCC----CCCcccchHHHHHHHHHHHhC
Confidence            211           1123555677777653221    125689999999999999988


No 126
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.1e-36  Score=270.12  Aligned_cols=198  Identities=19%  Similarity=0.227  Sum_probs=164.6

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH------HHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA------KKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++.......      .....+.+|+++++.++||||+++++++..
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKE-KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETT-TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cccceEEEeEEEecCCEEEEEEEECC-CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            34789999999999999999999877 78999999997653221      133457789999999999999999999999


Q ss_pred             cCEEEEEEcccCCC-ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          172 SHYICFLIDYCPNG-DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       172 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      .+.+++||||+.+| +|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence            99999999999666 99999965  3679999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........           ....++..|++||......    ......|+|+++++++|+..|
T Consensus       179 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~----~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          179 YLERGKLF-----------YTFCGTIEYCAPEVLMGNP----YRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             ECCTTCCB-----------CEECSCGGGCCHHHHTTCC----BCSHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCCCce-----------eccCCCccccChhhhcCCC----CCCCcccchhHHHHHHHHHhC
Confidence            76543221           1123455677777654221    125678999999999999988


No 127
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3.3e-35  Score=267.80  Aligned_cols=195  Identities=16%  Similarity=0.219  Sum_probs=158.5

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC----
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH----  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----  173 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++............+.+|+.+++.++||||+++++++...+    
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAI-LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECC-CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence            46899999999999999999998877 7899999999876556667788899999999999999999999997654    


Q ss_pred             --EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          174 --YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       174 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                        .+|+||||++ ++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus       102 ~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          102 FQDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             CCEEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             ccceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence              7899999995 67888874    3489999999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ......           .....++..|++||....     .......|+|++|++++|+..|-
T Consensus       177 ~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el~~g~  223 (371)
T 2xrw_A          177 AGTSFM-----------MTPYVVTRYYRAPEVILG-----MGYKENVDIWSVGCIMGEMIKGG  223 (371)
T ss_dssp             ------------------------CTTCCHHHHTT-----CCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             cccccc-----------cCCceecCCccCHHHhcC-----CCCCchHhHHHHHHHHHHHHhCC
Confidence            543211           112245566788877643     23457899999999999999993


No 128
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=9.3e-35  Score=255.66  Aligned_cols=196  Identities=21%  Similarity=0.305  Sum_probs=167.5

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe----c
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV----S  172 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~  172 (317)
                      ...+.|++.+.||+|+||.||+|.+.. ++..||+|++..........+.+.+|+.+++.++||||+++++++..    .
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK  101 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecC-CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence            344679999999999999999998887 78999999998776677778889999999999999999999999865    4


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEc-cCCcEEEeeeccc
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLR-EDGHIMLSDFDLC  249 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~-~~~~~kl~DFG~a  249 (317)
                      ..+++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.+  |+||||||+|||++ .++.+||+|||++
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             ceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            5689999999999999999653  66899999999999999999999999  99999999999998 7899999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........            ....++..|++||....      ......|+|+++++++|+..|
T Consensus       180 ~~~~~~~~------------~~~~~t~~y~aPE~~~~------~~~~~~Di~slG~~l~~l~~g  225 (290)
T 1t4h_A          180 TLKRASFA------------KAVIGTPEFMAPEMYEE------KYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             GGCCTTSB------------EESCSSCCCCCGGGGGT------CCCTHHHHHHHHHHHHHHHHS
T ss_pred             cccccccc------------ccccCCcCcCCHHHHhc------cCCCcchHHHHHHHHHHHHhC
Confidence            65433221            11245667888886542      245689999999999999988


No 129
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=4.4e-35  Score=264.71  Aligned_cols=197  Identities=21%  Similarity=0.236  Sum_probs=164.2

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      .+.|++++.||+|+||.||+|.+.. +++.||||++..... .....+.+.+|+++++.++||||+++++++...+..|+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEcc-CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            3569999999999999999999876 789999999975432 33556788999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||+. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus       132 v~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  209 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS  209 (348)
T ss_dssp             EEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred             EEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence            999995 7888877543 36689999999999999999999999999999999999999999999999999976543221


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                                    ..++..|++||.....  .......+.|+|++|++++|+..|.
T Consensus       210 --------------~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~ell~g~  250 (348)
T 1u5q_A          210 --------------FVGTPYWMAPEVILAM--DEGQYDGKVDVWSLGITCIELAERK  250 (348)
T ss_dssp             --------------CCSCGGGCCHHHHHTT--SSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------ccCCcceeCHhhhccc--cCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                          2355667888765321  1122356789999999999999993


No 130
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.8e-35  Score=257.36  Aligned_cols=201  Identities=25%  Similarity=0.377  Sum_probs=168.1

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-HHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-KKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ...+..++|++.+.||+|+||.||+|.+.. +++.||+|++....... .....+.+|+++++.++||||+++++++...
T Consensus         8 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   86 (284)
T 2vgo_A            8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQ-NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR   86 (284)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             ccchhhhhceeeheecCCCCeEEEEEEEcC-CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC
Confidence            345677899999999999999999999877 78899999997653322 2346788999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            9999999999999999999653  56899999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .....            ....++..|++||....     .......|+|+++++++|+..|.
T Consensus       165 ~~~~~------------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  209 (284)
T 2vgo_A          165 PSLRR------------RTMCGTLDYLPPEMIEG-----KTHDEKVDLWCAGVLCYEFLVGM  209 (284)
T ss_dssp             SSSCB------------CCCCSCGGGCCHHHHTT-----CCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccccc------------ccccCCCCcCCHHHhcc-----CCCCcccchhhHHHHHHHHHHCC
Confidence            33211            11234556677766543     33467899999999999999983


No 131
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.8e-35  Score=260.60  Aligned_cols=204  Identities=19%  Similarity=0.252  Sum_probs=168.7

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEE----cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHL----RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  170 (317)
                      .+..++|++.+.||+|+||.||+|.+    ...+++.||+|++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            46678999999999999999999986    33367899999997653 344567889999999999 8999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPN----------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL  234 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil  234 (317)
                      ..+..++||||+++++|.+++.....                ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil  177 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence            99999999999999999999976432                24899999999999999999999999999999999999


Q ss_pred             EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ++.++.+||+|||+++...........        ....++..|++||....     .......|+|+++++++|+.. |
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~ellt~g  244 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVK--------GNARLPVKWMAPESIFN-----CVYTFESDVWSYGIFLWELFSLG  244 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEEC--------SSSEECGGGCCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             EcCCCCEEEccccccccccccccceec--------cCCCCcceeeChHHhcC-----CCCChHHHHHHHHHHHHHHHhCC
Confidence            999999999999999876554322111        11123445777775532     345688999999999999987 6


No 132
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=4e-35  Score=258.66  Aligned_cols=207  Identities=20%  Similarity=0.271  Sum_probs=167.1

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS  172 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  172 (317)
                      .+.+..++|++.+.||+|+||.||+|.+.. +++.||+|++....    ....+.+|+.+++.+ +|+|++++++++...
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   78 (298)
T 1csn_A            4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLL-NNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG   78 (298)
T ss_dssp             --CEETTTEEEEEEEEECSSCEEEEEEETT-TTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             cCcccccceEEEEEEeecCCEEEEEEEECC-CCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence            356778899999999999999999999876 78999999986542    224577899999999 799999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc-----EEEeeec
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH-----IMLSDFD  247 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~-----~kl~DFG  247 (317)
                      ...++||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.     +||+|||
T Consensus        79 ~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           79 LHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             ceeEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            9999999999 99999999764 356999999999999999999999999999999999999987775     9999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      +|+............   ........++..|++||...     ........|+|++|++++|+..| .|
T Consensus       157 ~~~~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~il~el~~g~~p  217 (298)
T 1csn_A          157 MVKFYRDPVTKQHIP---YREKKNLSGTARYMSINTHL-----GREQSRRDDLEALGHVFMYFLRGSLP  217 (298)
T ss_dssp             TCEESBCTTTCCBCC---CCCCCCCCSCTTTCCHHHHT-----TCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccccccccccccc---ccCccCCCCCcccCCchhhc-----CCCCChHHHHHHHHHHHHHHHcCCCC
Confidence            998765433211100   01112234555667776543     33456889999999999999998 44


No 133
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.1e-34  Score=257.03  Aligned_cols=201  Identities=25%  Similarity=0.291  Sum_probs=163.5

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcC---CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRD---CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--  171 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--  171 (317)
                      +..+.|++++.||+|+||.||++.+..   .+++.||||++.... .....+.+.+|+++++.++||||+++++++..  
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG  106 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC
Confidence            444555999999999999999986532   267899999997653 45566789999999999999999999999987  


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      ...+++||||+++++|.+++...   .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence            46899999999999999999663   489999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ..........       .....++..|++||..     .........|+|+++++++|+..|
T Consensus       184 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~ll~g  233 (318)
T 3lxp_A          184 VPEGHEYYRV-------REDGDSPVFWYAPECL-----KEYKFYYASDVWSFGVTLYELLTH  233 (318)
T ss_dssp             CCTTCSEEEC----------CCCCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccc-------ccCCCCCceeeChHHh-----cCCCCCcHHHHHHHHHHHHHHHhC
Confidence            6554322111       1111233346666654     333455789999999999999998


No 134
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.7e-35  Score=265.29  Aligned_cols=205  Identities=20%  Similarity=0.264  Sum_probs=164.5

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHL  169 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~  169 (317)
                      ..+..++|++.+.||+|+||.||+|.+.    ..++..||+|++.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3567789999999999999999999873    2256789999997543 334557889999999999 899999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccC
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQPN---------------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDL  228 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDi  228 (317)
                      ...+..|+||||+++++|.+++.....                     ..+++..++.++.||+.||.|||++||+||||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            999999999999999999999976432                     23789999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccc
Q 042913          229 KPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSV  308 (317)
Q Consensus       229 kp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (317)
                      ||+|||++.++.+||+|||+++..........        .....++..|++||....     .......|+|++|++++
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~  265 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVV--------RGNARLPVKWMAPESLFE-----GIYTIKSDVWSYGILLW  265 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEE--------ETTEEECGGGCCHHHHHH-----CCCCHHHHHHHHHHHHH
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCcccee--------ccCccCccCccCHHHhcc-----CCCChhHhHHHHHHHHH
Confidence            99999999999999999999986644332111        111123445777775533     33467899999999999


Q ss_pred             ccCC-C
Q 042913          309 EQPG-G  313 (317)
Q Consensus       309 e~~~-G  313 (317)
                      |+.. |
T Consensus       266 el~t~g  271 (344)
T 1rjb_A          266 EIFSLG  271 (344)
T ss_dssp             HHTTTS
T ss_pred             HHHcCC
Confidence            9997 7


No 135
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=4.6e-35  Score=277.21  Aligned_cols=197  Identities=25%  Similarity=0.354  Sum_probs=163.9

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH-----------HHHHHHHHHHHHHHhcCCCCcceEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA-----------KKLSHVQMEAEILSMLDHPFLPTLY  166 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~~~  166 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++.......           ...+.+.+|+.+++.++||||++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKN-GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETT-TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECC-CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            46789999999999999999999887 78999999997653221           2346788999999999999999999


Q ss_pred             EEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEE
Q 042913          167 AHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIML  243 (317)
Q Consensus       167 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl  243 (317)
                      +++.....+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||
T Consensus       113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          113 DVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEE
Confidence            9999999999999999999999988653  6699999999999999999999999999999999999998776   6999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +|||+|+........           ....++..|++||....      .....+|+|++|++++|+..|.
T Consensus       191 ~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~ll~g~  244 (504)
T 3q5i_A          191 VDFGLSSFFSKDYKL-----------RDRLGTAYYIAPEVLKK------KYNEKCDVWSCGVIMYILLCGY  244 (504)
T ss_dssp             CCCTTCEECCTTSCB-----------CCCCSCTTTCCHHHHTT------CBCTHHHHHHHHHHHHHHHHSS
T ss_pred             EECCCCEEcCCCCcc-----------ccccCCcCCCCHHHhcc------CCCchHHHHHHHHHHHHHHhCC
Confidence            999999876543211           12245667888886542      2456889999999999999993


No 136
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=3.2e-35  Score=269.60  Aligned_cols=205  Identities=20%  Similarity=0.247  Sum_probs=164.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--CCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--HPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++++.||+|+||.||+|.+..  ++.||||++..........+.+.+|+.+++.++  |+||+++++++...+
T Consensus        52 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           52 SVKGRIYSILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECTT--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             cccCCceEEEEEEccCCCeEEEEEEcCC--CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            3445679999999999999999998764  889999999876666677788999999999997  599999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+|||+ .+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+|+...
T Consensus       130 ~~~lv~E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          130 YIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             EEEEEEEC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             EEEEEEec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            99999995 589999999764  5789999999999999999999999999999999999995 5899999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCccccccccc------ceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM------EFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ......        ......++..|++||.......      .........|+|+++++++|+..|.
T Consensus       206 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~  264 (390)
T 2zmd_A          206 PDTTSV--------VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  264 (390)
T ss_dssp             ----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCccc--------cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence            432211        0112245667788876643111      1123567899999999999999983


No 137
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=9.3e-35  Score=253.51  Aligned_cols=199  Identities=23%  Similarity=0.325  Sum_probs=165.2

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECC-CCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            4789999999999999999999876 789999999975432 23456788999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      |||+++++|.+++..  ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.........
T Consensus        84 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           84 LEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             EECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            999999999999965  367999999999999999999999999999999999999999999999999999765432211


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                              .......++..|++||......    ......|+|+++++++|+..|
T Consensus       162 --------~~~~~~~~~~~y~aPE~~~~~~----~~~~~~Di~slG~il~~l~~g  204 (276)
T 2yex_A          162 --------RLLNKMCGTLPYVAPELLKRRE----FHAEPVDVWSCGIVLTAMLAG  204 (276)
T ss_dssp             --------CCBCCCCSCGGGCCGGGGTCSS----BCHHHHHHHHHHHHHHHHHHS
T ss_pred             --------hcccCCccccCccChHHHhcCC----CCCCcchHHHHHHHHHHHHhC
Confidence                    0011123455567776653221    125679999999999999998


No 138
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=4.6e-35  Score=260.36  Aligned_cols=211  Identities=22%  Similarity=0.229  Sum_probs=160.5

Q ss_pred             ccCCCCccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEE
Q 042913           90 NLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYA  167 (317)
Q Consensus        90 ~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~  167 (317)
                      +......+..++|++.+.||+|+||.||+|.+...  ++..||+|++..........+.+.+|+.+++.++||||+++++
T Consensus        24 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~  103 (313)
T 3brb_A           24 NKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG  103 (313)
T ss_dssp             CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             hhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence            34455667789999999999999999999987642  3458999999876656677788999999999999999999999


Q ss_pred             EEEecC-----EEEEEEcccCCCChhccccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913          168 HLEVSH-----YICFLIDYCPNGDLHSLLPK----QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED  238 (317)
Q Consensus       168 ~~~~~~-----~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~  238 (317)
                      ++....     ..++||||+++++|.+++..    .....+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~  183 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD  183 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            987654     35999999999999998843    224669999999999999999999999999999999999999999


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      +.+||+|||+++..........        .....++..|++||..     .........|+|++|++++|+.. |
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~el~~~g  246 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQ--------GRIAKMPVKWIAIESL-----ADRVYTSKSDVWAFGVTMWEIATRG  246 (313)
T ss_dssp             SCEEECSCSCC------------------------CCGGGSCHHHH-----HSSCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CcEEEeecCcceecccccccCc--------ccccCCCccccCchhh-----cCCCccchhhhHHHHHHHHHHHhcC
Confidence            9999999999976543221100        0111223345555544     34445678999999999999998 6


No 139
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.1e-35  Score=278.91  Aligned_cols=197  Identities=25%  Similarity=0.361  Sum_probs=162.1

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. ++..||+|++.+..........+.+|+.+++.++||||+++++++.....+|+
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  113 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL  113 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETT-TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECC-CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            45689999999999999999999887 78999999998765444445778999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~a~~~~~  254 (317)
                      ||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+|+....
T Consensus       114 v~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          114 VMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            99999999999988653  66999999999999999999999999999999999999975   44599999999976643


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...           .....++..|++||....      .....+|+|++|++++|+..|.
T Consensus       192 ~~~-----------~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~  234 (494)
T 3lij_A          192 QKK-----------MKERLGTAYYIAPEVLRK------KYDEKCDVWSIGVILFILLAGY  234 (494)
T ss_dssp             TBC-----------BCCCCSCTTTCCHHHHTT------CBCTHHHHHHHHHHHHHHHHSS
T ss_pred             Ccc-----------ccccCCCcCeeCHHHHcc------cCCCchhHHHHHHHHHHHHhCC
Confidence            221           112246667888887642      2456899999999999999993


No 140
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.4e-35  Score=263.91  Aligned_cols=208  Identities=23%  Similarity=0.233  Sum_probs=160.0

Q ss_pred             cCCeEEe-eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913           99 LRHLKLV-RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        99 ~~~y~i~-~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  176 (317)
                      .++|++. +.||+|+||.||+|.+.. +++.||||++....  ......+.+|++++..+ +||||+++++++...+.+|
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~   87 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLI-TSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY   87 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSS-SCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcC-CCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            4678885 789999999999998776 78999999997652  23346788999999885 7999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeecccccCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH---IMLSDFDLCFQSD  253 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~---~kl~DFG~a~~~~  253 (317)
                      +||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+++...
T Consensus        88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             EEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            999999999999999663  56899999999999999999999999999999999999998775   9999999997654


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ........   .........++..|++||................|+|+++++++|+..|.
T Consensus       166 ~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~  223 (316)
T 2ac3_A          166 LNGDCSPI---STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY  223 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred             cCCccccc---cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence            32211000   00111122355567777665432111233457899999999999999983


No 141
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2e-35  Score=263.87  Aligned_cols=199  Identities=22%  Similarity=0.240  Sum_probs=165.7

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++.+.||+|+||.||+|.+.  +++.||+|++....  ....+.+.+|+++++.++||||+++++++...+..++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred             HHhccCccceeecCCCeeEEEEEEC--CCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            4578999999999999999999865  58999999987652  3345678999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ||||+++++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  192 (321)
T 2qkw_B          113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL  192 (321)
T ss_dssp             EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred             EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            999999999999996543  235899999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....        ......++..|++||....     .....+.|+|++|++++|+..|
T Consensus       193 ~~~~--------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~il~ell~g  237 (321)
T 2qkw_B          193 DQTH--------LSTVVKGTLGYIDPEYFIK-----GRLTEKSDVYSFGVVLFEVLCA  237 (321)
T ss_dssp             SCCC--------CBCCCEEETTTCCHHHHHH-----CBCCTHHHHHHHHHHHHHHHHC
T ss_pred             cccc--------cccccCCCccccCHHHhcC-----CCCCcccchHhHHHHHHHHHhC
Confidence            2110        1112235667888886543     2346789999999999999988


No 142
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=3.3e-35  Score=257.41  Aligned_cols=197  Identities=22%  Similarity=0.339  Sum_probs=163.1

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++.......    ...+.+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcC-CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            34689999999999999999999887 78999999997653221    13567889999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeeccc
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG----HIMLSDFDLC  249 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~----~~kl~DFG~a  249 (317)
                      ..++||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             eEEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            99999999999999999965  35689999999999999999999999999999999999998877    8999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .........           ....++..|++||..     .........|+|+++++++|+..|
T Consensus       160 ~~~~~~~~~-----------~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g  207 (283)
T 3bhy_A          160 HKIEAGNEF-----------KNIFGTPEFVAPEIV-----NYEPLGLEADMWSIGVITYILLSG  207 (283)
T ss_dssp             EECC-------------------CCCGGGCCHHHH-----TTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eeccCCCcc-----------cccCCCcCccCccee-----cCCCCCcchhhhhHHHHHHHHHHC
Confidence            765432211           111344456666654     333456789999999999999988


No 143
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=3.5e-35  Score=265.41  Aligned_cols=205  Identities=23%  Similarity=0.277  Sum_probs=164.1

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe------
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV------  171 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------  171 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+++++.++||||+++++++..      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRK-TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETT-TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred             cccceeEEEEEecCCCcEEEEEEECC-CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence            45899999999999999999999877 78999999987654444444567889999999999999999999876      


Q ss_pred             --cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          172 --SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       172 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                        .+.+|+||||++ ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|
T Consensus        94 ~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           94 RCKGSIYLVFDFCE-HDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             ---CEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             cCCceEEEEEeccC-CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence              457899999995 5777776543 356999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +..........      .......++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       172 ~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwslG~il~ell~g~~  227 (351)
T 3mi9_A          172 RAFSLAKNSQP------NRYTNRVVTLWYRPPELLLGE----RDYGPPIDLWGAGCIMAEMWTRSP  227 (351)
T ss_dssp             EECCCCSSSSC------CCCCSSCSCGGGCCHHHHTTC----CSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccccccccc------cccCCcccccCccCchhhcCC----CCCCcHhHHHHHHHHHHHHHhCCC
Confidence            87653222111      111122445567777754321    223578999999999999999844


No 144
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2.1e-35  Score=267.82  Aligned_cols=202  Identities=24%  Similarity=0.310  Sum_probs=171.1

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+.+..++|++++.||+|+||.||+|.+.. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus        26 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           26 KVGELKDDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD  103 (360)
T ss_dssp             TCCCCCGGGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET
T ss_pred             cccccccccceeeeeecCCCCeEEEEEEECC-CCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC
Confidence            4467778999999999999999999999887 78999999997653 455667899999999999999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      +.+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          104 GEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred             CEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence            9999999999999999999663  5689999999999999999999996 999999999999999999999999999865


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .....            .....++..|++||....     .......|+|+++++++|+..| .|
T Consensus       182 ~~~~~------------~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~~p  229 (360)
T 3eqc_A          182 LIDSM------------ANSFVGTRSYMSPERLQG-----THYSVQSDIWSMGLSLVEMAVGRYP  229 (360)
T ss_dssp             HHHHC----------------CCCCTTCCHHHHTT-----CCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred             ccccc------------ccCCCCCCCeECHHHHcC-----CCCCchhhHHHHHHHHHHHHhCCCC
Confidence            42211            011244556777776543     3456789999999999999998 44


No 145
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.6e-35  Score=265.08  Aligned_cols=205  Identities=18%  Similarity=0.233  Sum_probs=166.2

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHH-HHhcCCCCcceEEEEEEec
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEI-LSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~  172 (317)
                      ...+..++|++++.||+|+||.||+|.+.. +++.||||++......... ..+..|+.+ ++.++||||+++++++...
T Consensus        45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~e~~~~~~~~~h~~iv~~~~~~~~~  122 (340)
T 3an0_A           45 NFEVKADDLEPIMELGRGAYGVVEKMRHVP-SGQIMAVKRIRATVNSQEQ-KRLLMDLDISMRTVDCPFTVTFYGALFRE  122 (340)
T ss_dssp             CCCCCSSCEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSCCCCHHH-HHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred             ceEEehhheeEeeEecccCCEEEEEEEEcC-CCCEEEEEEeccccCcHHH-HHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence            345777899999999999999999999876 7899999999765444433 444555555 7788999999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      +.+|+||||++ ++|.+++...  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus       123 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  201 (340)
T 3an0_A          123 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS  201 (340)
T ss_dssp             SCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred             CcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            99999999995 5998887541  356799999999999999999999987 9999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +.......           .....++..|++||....+.. ........|+|++|++++|+..|
T Consensus       202 ~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~Di~slG~il~el~tg  253 (340)
T 3an0_A          202 GYLVDSVA-----------KTIDAGCKPYMAPERINPELN-QKGYSVKSDIWSLGITMIELAIL  253 (340)
T ss_dssp             HHHSCHHH-----------HHHSSCCCCCCCHHHHSCCTT-CCSCCHHHHHHHHHHHHHHHHHT
T ss_pred             eecccccc-----------cccCCCCccccCccccccccc-cCCCCchhhHHHHHHHHHHHHHC
Confidence            76533111           111256677888887643321 22345789999999999999988


No 146
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=5.8e-35  Score=257.19  Aligned_cols=203  Identities=18%  Similarity=0.227  Sum_probs=163.2

Q ss_pred             ccccCCeEEee-eecccCCeEEEEEEEc-CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVR-HLGTGNLGRVFLCHLR-DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~-~lg~G~~g~Vy~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++.+ .||+|+||.||+|.+. ..+++.||||++..........+.+.+|+++++.++||||+++++++ ..+
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~   90 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE   90 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence            45668999998 9999999999999653 22578999999976644445567899999999999999999999998 567


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ..++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            789999999999999999763  569999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      .........       ....++..|++||..     .........|+|+++++++|+.. |
T Consensus       169 ~~~~~~~~~-------~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~~g  217 (291)
T 1xbb_A          169 ADENYYKAQ-------THGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYG  217 (291)
T ss_dssp             TTCSEEEC-----------CCCGGGCCHHHH-----HHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             cCCCccccc-------ccCCCCceeeChHHh-----ccCCCChhhhHHHHHHHHHHHHhcC
Confidence            544322111       011223446666654     33345678999999999999997 7


No 147
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=3.4e-35  Score=258.09  Aligned_cols=196  Identities=21%  Similarity=0.306  Sum_probs=161.9

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERS-SGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheeecceeccCCCeEEEEEEEcc-CCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            4689999999999999999999877 78999999997653 223356788999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccCC
Q 042913          179 IDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~~  253 (317)
                      |||+++++|.+++...  ....+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999999988542  23669999999999999999999999999999999999999   456789999999997654


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....           .....++..|++||....      ......|+|+++++++|+..|
T Consensus       179 ~~~~-----------~~~~~~t~~y~aPE~~~~------~~~~~~Di~slG~il~~ll~g  221 (285)
T 3is5_A          179 SDEH-----------STNAAGTALYMAPEVFKR------DVTFKCDIWSAGVVMYFLLTG  221 (285)
T ss_dssp             -------------------CTTGGGCCHHHHTT------CCCHHHHHHHHHHHHHHHHHS
T ss_pred             Cccc-----------CcCcccccCcCChHHhcc------CCCcccCeehHHHHHHHHHhC
Confidence            3221           112245566788886542      235789999999999999988


No 148
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.6e-35  Score=261.58  Aligned_cols=205  Identities=19%  Similarity=0.248  Sum_probs=160.7

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCC---CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCT---SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      ..+...+|++.+.||+|+||.||+|.+....   +..||+|++.... .......+.+|+++++.++||||+++++++..
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK  117 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence            3577889999999999999999999876522   2359999997643 44555678999999999999999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+..++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            99999999999999999999754 46799999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...........       ....++..|++||..     .........|+|+++++++|+.. |
T Consensus       197 ~~~~~~~~~~~-------~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~ellt~g  247 (333)
T 1mqb_A          197 LEDDPEATYTT-------SGGKIPIRWTAPEAI-----SYRKFTSASDVWSFGIVMWEVMTYG  247 (333)
T ss_dssp             ---------------------CCCGGGSCHHHH-----HSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             hcccccccccc-------CCCCccccccCchhc-----ccCCCCchhhhHHHHHHHHHHHcCC
Confidence            65432211110       011223346666654     33345678999999999999886 7


No 149
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=6.1e-35  Score=255.33  Aligned_cols=200  Identities=22%  Similarity=0.292  Sum_probs=164.0

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      +..+..++|++++.||+|+||.||+|.+..  +..||+|++......   .+.+.+|+++++.++||||+++++++. .+
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~   80 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNG--HTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVT-QE   80 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcC--CcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEc-CC
Confidence            446677899999999999999999998764  778999999765332   356889999999999999999999886 45


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ..++||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence            68999999999999999965433468999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ......         .....++..|++||...     ........|+|+++++++|+.. |
T Consensus       161 ~~~~~~---------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~el~~~g  207 (279)
T 1qpc_A          161 DNEYTA---------REGAKFPIKWTAPEAIN-----YGTFTIKSDVWSFGILLTEIVTHG  207 (279)
T ss_dssp             SSCEEC---------CTTCCCCTTTSCHHHHH-----HCEECHHHHHHHHHHHHHHHHTTT
T ss_pred             Cccccc---------ccCCCCccCccChhhhc-----cCCCCchhhhHHHHHHHHHHHhCC
Confidence            432110         11112344577777653     3344678999999999999997 6


No 150
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.4e-34  Score=268.58  Aligned_cols=198  Identities=23%  Similarity=0.262  Sum_probs=165.1

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc------CCCCcceEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML------DHPFLPTLYAH  168 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~  168 (317)
                      ......+|++++.||+|+||.||+|.+.. +++.||||++...   ......+.+|+++++.+      +|+||++++++
T Consensus        92 ~~~~~~ry~~~~~LG~G~fg~V~~a~~~~-~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHK-VHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             TCEETTTEEEEEEEEESSSEEEEEEEETT-TTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             CCcccCcEEEEEEcccCccEEEEEEEECC-CCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence            44566889999999999999999999887 7899999999754   33445677788888877      57799999999


Q ss_pred             EEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--EEEeee
Q 042913          169 LEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH--IMLSDF  246 (317)
Q Consensus       169 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~--~kl~DF  246 (317)
                      +...+.+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+||
T Consensus       168 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          168 FTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             cccCCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeec
Confidence            99999999999999 579999998776667999999999999999999999999999999999999999887  999999


Q ss_pred             cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      |+|+.......             ...++..|++||....     .......|+|+++++++|+..|.|
T Consensus       247 G~a~~~~~~~~-------------~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltG~~  297 (429)
T 3kvw_A          247 GSSCYEHQRVY-------------TYIQSRFYRAPEVILG-----ARYGMPIDMWSLGCILAELLTGYP  297 (429)
T ss_dssp             TTCEETTCCCC-------------SSCSCGGGCCHHHHHT-----BCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccceecCCccc-------------ccCCCCCccChHHHhC-----CCCCchHHHHhHHHHHHHHHhCCC
Confidence            99965432211             1134445777776543     334678999999999999999954


No 151
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=8.7e-35  Score=264.44  Aligned_cols=202  Identities=24%  Similarity=0.313  Sum_probs=169.2

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh------cHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------SAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV  171 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  171 (317)
                      .++|++.+.||+|+||.||+|.+.. +|+.||||++.....      .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRA-TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhcccceEEecCCCEEEEEEEECC-CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            4689999999999999999999876 789999999875431      123356788999999999 79999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      ....|+||||+++++|.+++...  ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..
T Consensus       172 ~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~  249 (365)
T 2y7j_A          172 SSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH  249 (365)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence            99999999999999999999653  5699999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccc-eeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME-FVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +......           ....++..|++||........ ........|+|++|++++|+..|.
T Consensus       250 ~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~  302 (365)
T 2y7j_A          250 LEPGEKL-----------RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS  302 (365)
T ss_dssp             CCTTCCB-----------CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             cCCCccc-----------ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence            6543211           122456678888876543322 223467899999999999999993


No 152
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.3e-35  Score=253.85  Aligned_cols=198  Identities=23%  Similarity=0.283  Sum_probs=164.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++.+.||+|+||.||+|.+..  ++.||+|++.......   +.+.+|+++++.++||||+++++++...+..
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   78 (267)
T 3t9t_A            4 VIDPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   78 (267)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETT--TEEEEEEEECTTTBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             EEchhheeeeeEecCCCceeEEEEEecC--CCeEEEEEccccCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCCe
Confidence            4567899999999999999999998864  7889999998654333   5688899999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++.....
T Consensus        79 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  157 (267)
T 3t9t_A           79 CLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  157 (267)
T ss_dssp             EEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             EEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence            9999999999999999764 356899999999999999999999999999999999999999999999999999765432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...         ......++..|++||..     .......+.|+|+++++++|+.. |
T Consensus       158 ~~~---------~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~~g  202 (267)
T 3t9t_A          158 QYT---------SSTGTKFPVKWASPEVF-----SFSRYSSKSDVWSFGVLMWEVFSEG  202 (267)
T ss_dssp             HHH---------STTSTTCCGGGCCHHHH-----HHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccc---------ccccccccccccChhhh-----cCCCccchhchhhhHHHHHHHhccC
Confidence            110         00111223346666654     33345678999999999999988 6


No 153
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=9.4e-35  Score=268.91  Aligned_cols=201  Identities=22%  Similarity=0.313  Sum_probs=158.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc------HHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS------AKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++......      ......+.+|+++|+.++||||+++++++.
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECC-CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            345799999999999999999999887 8899999999765321      122345789999999999999999999975


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeec
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG---HIMLSDFD  247 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~---~~kl~DFG  247 (317)
                       .+.+|+||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus       211 -~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          211 -AEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             -SSEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             -cCceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence             4568999999999999999955  46799999999999999999999999999999999999997544   59999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +|+........           ....++..|++||.....  .........|+|+++++++|+..|.
T Consensus       288 ~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~--~~~~~~~~~DiwslG~il~~lltg~  341 (419)
T 3i6u_A          288 HSKILGETSLM-----------RTLCGTPTYLAPEVLVSV--GTAGYNRAVDCWSLGVILFICLSGY  341 (419)
T ss_dssp             TTTSCC----------------------CTTCCTTTTC------CTTHHHHHHHHHHHHHHHHHHSS
T ss_pred             cceecCCCccc-----------cccCCCCCccCceeeecC--CCCCCCchhhhHhHHHHHHHHHHCC
Confidence            99876432211           112456678888875321  1123356899999999999999993


No 154
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=4.3e-35  Score=258.69  Aligned_cols=199  Identities=20%  Similarity=0.263  Sum_probs=164.1

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+++++.++||||+++++++...+..|+|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcC-CCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence            4789999999999999999999887 789999999976544444456788999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      |||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  159 (299)
T 2r3i_A           81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  159 (299)
T ss_dssp             EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence            99995 79999997765567999999999999999999999999999999999999999999999999999765432211


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                                .....++..|++||......    ......|+|++|++++|+..|
T Consensus       160 ----------~~~~~~~~~y~aPE~~~~~~----~~~~~~Di~slG~~l~~l~~g  200 (299)
T 2r3i_A          160 ----------YTHEVVTLWYRAPEILLGAK----YYSTAVDIWSLGCIFAEMVTR  200 (299)
T ss_dssp             ----------TTSCBCCCTTCCHHHHTTCS----SCCTHHHHHHHHHHHHHHHHS
T ss_pred             ----------cCcccccccccCcHHhhccc----cCChHHHHHHHHHHHHHHHhC
Confidence                      11123456688887654321    245789999999999999998


No 155
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=4.5e-35  Score=262.18  Aligned_cols=202  Identities=25%  Similarity=0.363  Sum_probs=162.2

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceE--EEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEec
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANF--ALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVS  172 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  172 (317)
                      .+..++|++.+.||+|+||.||+|.+.. ++..+  ++|.+.... .....+.+.+|+++++.+ +||||+++++++...
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~   98 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR   98 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEE-TTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEET
T ss_pred             cccHHHccceeeeecCCCceEEEEEEcc-CCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeC
Confidence            4667899999999999999999999876 56644  999886532 334556789999999999 899999999999999


Q ss_pred             CEEEEEEcccCCCChhcccccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQP--------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED  238 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~  238 (317)
                      +..|+||||+++++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~  178 (327)
T 1fvr_A           99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  178 (327)
T ss_dssp             TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC
Confidence            99999999999999999996542              2468999999999999999999999999999999999999999


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      +.+||+|||+++......           ......++..|++||..     .........|+|++|++++|+.. | .|
T Consensus       179 ~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~ellt~g~~p  241 (327)
T 1fvr_A          179 YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESL-----NYSVYTTNSDVWSYGVLLWEIVSLGGTP  241 (327)
T ss_dssp             GCEEECCTTCEESSCEEC-----------CC----CCTTTCCHHHH-----HHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CeEEEcccCcCccccccc-----------cccCCCCCccccChhhh-----ccccCCchhcchHHHHHHHHHHcCCCCC
Confidence            999999999987432211           01111234456777655     33345678999999999999986 7 44


No 156
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=5e-35  Score=256.15  Aligned_cols=196  Identities=20%  Similarity=0.296  Sum_probs=164.8

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe----
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV----  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----  171 (317)
                      ....++|++++.||+|+||.||+|.+.. +++.||+|++....      ..+.+|+++++.++||||+++++++..    
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRI-DGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYD   79 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETT-TCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC
T ss_pred             chhccccceeeeeccCCceEEEEEEEcC-CCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccC
Confidence            3445789999999999999999999876 78999999997642      346789999999999999999998854    


Q ss_pred             ------------cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913          172 ------------SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG  239 (317)
Q Consensus       172 ------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~  239 (317)
                                  ...+++||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++
T Consensus        80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  159 (284)
T 2a19_B           80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK  159 (284)
T ss_dssp             ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC
Confidence                        45689999999999999999765556799999999999999999999999999999999999999999


Q ss_pred             cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .+||+|||+++.......           .....++..|++||....     .......|+|+++++++|+..|.
T Consensus       160 ~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~~~  218 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGK-----------RTRSKGTLRYMSPEQISS-----QDYGKEVDLYALGLILAELLHVC  218 (284)
T ss_dssp             EEEECCCTTCEESSCCSC-----------CCCCCSCCTTSCHHHHHC-----SCCCTHHHHHHHHHHHHHHHSCC
T ss_pred             CEEECcchhheecccccc-----------ccccCCcccccChhhhcc-----CCCcchhhhHHHHHHHHHHHhcC
Confidence            999999999977654321           111245667777776543     33467899999999999999883


No 157
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2.5e-34  Score=257.33  Aligned_cols=193  Identities=21%  Similarity=0.267  Sum_probs=161.4

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEe--cC
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEV--SH  173 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~--~~  173 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||+|++....     .+.+.+|+++++.++ ||||+++++++..  ..
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~  106 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAINIT-NNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSR  106 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred             cCCCceEEEEEecccCCeEEEEEEECC-CCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC
Confidence            345899999999999999999998877 78999999986432     356889999999997 9999999999987  67


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeecccccC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG-HIMLSDFDLCFQS  252 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~-~~kl~DFG~a~~~  252 (317)
                      ..++||||+.+++|.+++..     +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|+..
T Consensus       107 ~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          107 TPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             CEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             ceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            89999999999999999843     89999999999999999999999999999999999999776 8999999999866


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ......           ....++..|++||....    ........|+|++|++++|+..| .|
T Consensus       182 ~~~~~~-----------~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~il~~ll~g~~p  230 (330)
T 3nsz_A          182 HPGQEY-----------NVRVASRYFKGPELLVD----YQMYDYSLDMWSLGCMLASMIFRKEP  230 (330)
T ss_dssp             CTTCCC-----------CSCCSCGGGCCHHHHTT----CCCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             CCCCcc-----------ccccccccccChhhhcC----CCcCCchhhHHHHHHHHHHHHhCCCC
Confidence            543221           11234455777776532    12345789999999999999988 44


No 158
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=8.4e-35  Score=255.44  Aligned_cols=198  Identities=20%  Similarity=0.251  Sum_probs=162.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH--H---HHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA--K---KLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      .+..++|++.+.||+|+||.||+|.+.. +++.||+|++.......  .   ..+.+.+|+++++.++||||+++++++.
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVK-DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETT-TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             hhhhccceehhccccCCceeEEEEEEcC-CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            4667899999999999999999999877 78999999986543221  1   1267899999999999999999999987


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCc-----EEE
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGH-----IML  243 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~-----~kl  243 (317)
                      ...  ++||||+++++|.+++... ...+++..++.++.||+.||.|||++|  |+||||||+|||++.++.     +||
T Consensus        94 ~~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl  170 (287)
T 4f0f_A           94 NPP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV  170 (287)
T ss_dssp             TTT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred             CCC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence            665  6999999999998888654 457999999999999999999999999  999999999999988776     999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +|||+|+......             ....++..|++||.....   ........|+|+++++++|+..|
T Consensus       171 ~Dfg~~~~~~~~~-------------~~~~g~~~y~aPE~~~~~---~~~~~~~~Di~slG~~l~~l~~g  224 (287)
T 4f0f_A          171 ADFGLSQQSVHSV-------------SGLLGNFQWMAPETIGAE---EESYTEKADTYSFAMILYTILTG  224 (287)
T ss_dssp             CCCTTCBCCSSCE-------------ECCCCCCTTSCGGGSSCS---SCEECHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCccccccccc-------------cccCCCccccCchhhccC---CCCcCchhhHHHHHHHHHHHHcC
Confidence            9999997543311             112345567777765322   22345789999999999999998


No 159
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=5.9e-35  Score=257.94  Aligned_cols=201  Identities=19%  Similarity=0.232  Sum_probs=159.7

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEe--
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEV--  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~--  171 (317)
                      .+..++|++++.||+|+||.||+|.+.   ++.||||++...     ....+..|.+++..  ++||||+++++++..  
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSWQ---GENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR   75 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEET---TEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEEC---CEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence            456789999999999999999999873   689999998654     22445667777776  789999999998654  


Q ss_pred             --cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcE
Q 042913          172 --SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH--------ALGIIYRDLKPENILLREDGHI  241 (317)
Q Consensus       172 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH--------~~~ivHrDikp~Nill~~~~~~  241 (317)
                        ...+|+||||+++++|.+++..   ..+++..++.++.||+.||.|||        +.+|+||||||+|||++.++.+
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~  152 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC  152 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCE
T ss_pred             CCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCE
Confidence              3568999999999999999954   56999999999999999999999        9999999999999999999999


Q ss_pred             EEeeecccccCCCCCCeeecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC
Q 042913          242 MLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       242 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ||+|||+|+...........      ......++..|++||.......... ......|+|+++++++|+..|
T Consensus       153 kl~Dfg~a~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          153 CIADLGLAVMHSQSTNQLDV------GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             EECCCTTCEEEETTTTEEEC------CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeeCCCeeecccccccccc------cccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            99999999765443322111      1112245667777776654322111 334689999999999999988


No 160
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.5e-35  Score=275.54  Aligned_cols=202  Identities=20%  Similarity=0.289  Sum_probs=165.5

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ...+..++|++.+.||+|+||.||+|.+..  +..||||+++....   ..+.+.+|+++++.++||||+++++++. ..
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNK--HTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETT--TEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECC--ccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            345677899999999999999999998874  78899999976532   3467889999999999999999999986 56


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+|+||||+++|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+...
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            78999999999999999975433468999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      .....         ......++..|++||...     ......+.|+|+++++++|+.. | .|
T Consensus       336 ~~~~~---------~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~t~g~~P  385 (454)
T 1qcf_A          336 DNEYT---------AREGAKFPIKWTAPEAIN-----FGSFTIKSDVWSFGILLMEIVTYGRIP  385 (454)
T ss_dssp             CHHHH---------TTCSSSSCGGGSCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCcee---------ccCCCcccccccCHHHhc-----cCCCCcHHHHHhHHHHHHHHHhCCCCC
Confidence            32110         001112234577777653     2334678999999999999997 7 44


No 161
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=8.3e-35  Score=271.69  Aligned_cols=197  Identities=23%  Similarity=0.324  Sum_probs=163.8

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ...+..++|++.+.||+|+||.||+|.+.   ++.||||+++...    ..+.+.+|+++++.++||||+++++++....
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  259 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK  259 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEec---CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC
Confidence            34577889999999999999999999876   5799999997653    3457889999999999999999999987654


Q ss_pred             -EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          174 -YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       174 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                       .+|+||||+++|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+..
T Consensus       260 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence             7999999999999999998764455899999999999999999999999999999999999999999999999999854


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      .....             ...+...|++||....     .....+.|+|+++++++|+.. | .|
T Consensus       340 ~~~~~-------------~~~~~~~y~aPE~~~~-----~~~~~~sDvwslG~~l~el~t~g~~P  386 (450)
T 1k9a_A          340 SSTQD-------------TGKLPVKWTAPEALRE-----KKFSTKSDVWSFGILLWEIYSFGRVP  386 (450)
T ss_dssp             C-------------------CCCTTTSCHHHHHS-----SCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ccccc-------------CCCCCcceeCHHHhcC-----CCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            32111             0123445778876543     334578999999999999987 7 44


No 162
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.7e-35  Score=261.11  Aligned_cols=204  Identities=21%  Similarity=0.282  Sum_probs=162.1

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEe----
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEV----  171 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----  171 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||||++....   .....+.+|+.+++.+ +||||+++++++..    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECC-CCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            356899999999999999999999876 78999999987542   2235678899999998 79999999999976    


Q ss_pred             --cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          172 --SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       172 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                        .+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  176 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS  176 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence              568999999999999999997765567999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .........          .....++..|++||................|+|+++++++|+..|.
T Consensus       177 ~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  231 (326)
T 2x7f_A          177 AQLDRTVGR----------RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA  231 (326)
T ss_dssp             C-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSS
T ss_pred             eecCcCccc----------cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCC
Confidence            766432211          1112355668888876543333344567899999999999999983


No 163
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=2.6e-35  Score=277.54  Aligned_cols=199  Identities=25%  Similarity=0.370  Sum_probs=169.4

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ....++|++.+.||+|+||.||+|.+.. +++.||||++.+.... ......+.+|+.+++.++||||+++++++...+.
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  100 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY  100 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECC-CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            3456789999999999999999999887 7899999999765332 2445778999999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeeccccc
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQ  251 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~  251 (317)
                      +|+||||+.+++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.
T Consensus       101 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            9999999999999999865  3679999999999999999999999999999999999999   4678999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .......           ....++..|++||....      .....+|+|++|++++|+..|.
T Consensus       179 ~~~~~~~-----------~~~~gt~~y~aPE~~~~------~~~~~~DiwslG~il~~ll~g~  224 (484)
T 3nyv_A          179 FEASKKM-----------KDKIGTAYYIAPEVLHG------TYDEKCDVWSTGVILYILLSGC  224 (484)
T ss_dssp             BCCCCSH-----------HHHTTGGGTCCHHHHHT------CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccc-----------ccCCCCccccCceeecC------CCCCcceeHHHHHHHHHHHHCC
Confidence            6543321           11245667888887643      2356899999999999999994


No 164
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=5e-35  Score=257.01  Aligned_cols=204  Identities=17%  Similarity=0.189  Sum_probs=156.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++++.||+|+||.||+|.+.. +++.||+|++..........+.+..+...++.++||||+++++++...+..
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVP-SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecC-CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            4567899999999999999999999877 789999999976644444445556666668889999999999999999999


Q ss_pred             EEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          176 CFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ++||||++ ++|.+++..  .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+|+..
T Consensus        82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99999995 688777643  1346799999999999999999999998 9999999999999999999999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ......           ....++..|++||....+. .........|+|+++++++|+..|
T Consensus       161 ~~~~~~-----------~~~~~t~~y~aPE~~~~~~-~~~~~~~~~Di~slG~il~~l~~g  209 (290)
T 3fme_A          161 VDDVAK-----------DIDAGCKPYMAPERINPEL-NQKGYSVKSDIWSLGITMIELAIL  209 (290)
T ss_dssp             --------------------CCCCCCSCHHHHSCCT-TC--CCHHHHHHHHHHHHHHHHHT
T ss_pred             cccccc-----------cccCCCccccChhhcChhh-cCcCCCcHHHHHHHHHHHHHHHHC
Confidence            432211           1124566788888753221 223345789999999999999888


No 165
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=3.8e-35  Score=266.99  Aligned_cols=195  Identities=18%  Similarity=0.243  Sum_probs=150.1

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec------
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS------  172 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------  172 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||||++............+.+|+++++.++||||+++++++...      
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTK-TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETT-TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECC-CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            4799999999999999999998877 899999999977655666678889999999999999999999998653      


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ..+|+|+|++ +++|.+++..   ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             CeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            5689999999 8999999854   56999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ....             ....++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       183 ~~~~-------------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~ell~g~~  228 (367)
T 2fst_X          183 ADEM-------------TGYVATRWYRAPEIMLNW----MHYNQTVDIWSVGCIMAELLTGRT  228 (367)
T ss_dssp             ---------------------CCCTTCCHHHHTTC----CSCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccC-------------CCcCcCcCccChHHHcCC----cCCCchhhHHHHHHHHHHHHhCCC
Confidence            4221             112455667788765421    234578899999999999999943


No 166
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=2.1e-35  Score=264.28  Aligned_cols=201  Identities=16%  Similarity=0.206  Sum_probs=160.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCce----EEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSAN----FALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      .+..++|++++.||+|+||.||+|.+.. +++.    ||+|.+.... .......+.+|+.+++.++||||+++++++. 
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   85 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-   85 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECC-TTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcC-CCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-
Confidence            4667899999999999999999999876 5555    6777664332 1223345778999999999999999999886 


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      +...++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            55689999999999999998654 35689999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ........        ......++..|++||....     .......|+|+++++++|+.. |
T Consensus       165 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~~g  214 (325)
T 3kex_A          165 LPPDDKQL--------LYSEAKTPIKWMALESIHF-----GKYTHQSDVWSYGVTVWELMTFG  214 (325)
T ss_dssp             SCCCTTCC--------C-----CCTTTSCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCcccccc--------cccCCCCcccccChHHhcc-----CCCChhhHhHHhHHHHHHHHhCC
Confidence            65433211        1111234456777776543     335678999999999999988 7


No 167
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.1e-34  Score=252.02  Aligned_cols=203  Identities=22%  Similarity=0.272  Sum_probs=164.2

Q ss_pred             ccccCCeEEee-eecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVR-HLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~-~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|.+.+ .||+|+||.||+|.+.. .++..||+|++.... .....+.+.+|+++++.++||||+++++++ ..+
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            35567888887 99999999999998642 257789999997652 445667899999999999999999999999 456


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ..++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             CcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            689999999999999998643 4569999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ........       .....++..|++||..     .........|+|+++++++|+.. |
T Consensus       162 ~~~~~~~~-------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~ellt~g  210 (287)
T 1u59_A          162 ADDSYYTA-------RSAGKWPLKWYAPECI-----NFRKFSSRSDVWSYGVTMWEALSYG  210 (287)
T ss_dssp             TCSCEECC-------CCSSCCCGGGCCHHHH-----HHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             cCcceeec-------cccccccccccCHHHh-----ccCCCCchhhHHHHHHHHHHHHcCC
Confidence            43322111       1111233456666654     33445678999999999999997 7


No 168
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-35  Score=265.99  Aligned_cols=213  Identities=18%  Similarity=0.217  Sum_probs=166.1

Q ss_pred             HhhccCCCCccc----cCCeEEeeeecccCCeEEEEEEEcCC-------CCceEEEEEeehhhhcHHHHHHHHHHHHHHH
Q 042913           87 AATNLSSNGKLH----LRHLKLVRHLGTGNLGRVFLCHLRDC-------TSANFALKVVDKDLLSAKKLSHVQMEAEILS  155 (317)
Q Consensus        87 ~~~~~~~~~~~~----~~~y~i~~~lg~G~~g~Vy~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~  155 (317)
                      ........+.+.    .++|++.+.||+|+||.||+|.+...       .++.||+|++...       ..+.+|+++++
T Consensus        25 ~~~~~l~~g~~i~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~   97 (352)
T 2jii_A           25 TSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQ   97 (352)
T ss_dssp             HHSCCCCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHH
T ss_pred             hhhhhCCCCceeecccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHH
Confidence            333444455444    47999999999999999999988752       3789999999764       35778999999


Q ss_pred             hcCCCCcce---------------EEEEEEe-cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 042913          156 MLDHPFLPT---------------LYAHLEV-SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH  219 (317)
Q Consensus       156 ~l~h~~iv~---------------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH  219 (317)
                      .++||||++               +++++.. ++..|+||||+ +++|.+++.......+++..++.++.||+.||.|||
T Consensus        98 ~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  176 (352)
T 2jii_A           98 RAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH  176 (352)
T ss_dssp             HHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999988877               6777765 78899999999 999999997754577999999999999999999999


Q ss_pred             HcCCeeccCCCCcEEEccCC--cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchh
Q 042913          220 ALGIIYRDLKPENILLREDG--HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRR  297 (317)
Q Consensus       220 ~~~ivHrDikp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~  297 (317)
                      ++||+||||||+|||++.++  .+||+|||+|+.+.........   .........++..|++||...     ......+
T Consensus       177 ~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~  248 (352)
T 2jii_A          177 ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY---VEGSRSPHEGDLEFISMDLHK-----GCGPSRR  248 (352)
T ss_dssp             HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC---CTTSSCTTCSCTTTCCHHHHT-----TCCCCHH
T ss_pred             hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc---cccccccccCCccccCHHHHc-----cCCCCch
Confidence            99999999999999999988  9999999999876543321111   011112224555666666543     3345689


Q ss_pred             hhccCCcccccccCCC-CC
Q 042913          298 EQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       298 ~~~~~~~~~~~e~~~G-~p  315 (317)
                      .|+|++|++++|+..| .|
T Consensus       249 ~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          249 SDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             HHHHHHHHHHHHHHHSCCT
T ss_pred             hhHHHHHHHHHHHHhCCCC
Confidence            9999999999999998 44


No 169
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.1e-35  Score=263.52  Aligned_cols=201  Identities=21%  Similarity=0.255  Sum_probs=158.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH---HHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA---KKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++.......   ...+.+.+|+++++.++||||+++++++...+.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKN-TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSS-CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECC-CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            45789999999999999999998876 78999999997543222   123467899999999999999999999999999


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .++||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        87 ~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           87 ISLVFDFME-TDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  164 (346)
T ss_dssp             CEEEEECCS-EEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             eEEEEEcCC-CCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence            999999995 5888888654 35688999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ......          ...++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       165 ~~~~~~----------~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~ell~g~~  211 (346)
T 1ua2_A          165 PNRAYT----------HQVVTRWYRAPELLFGA----RMYGVGVDMWAVGCILAELLLRVP  211 (346)
T ss_dssp             CCCCCC----------CSCCCCTTCCHHHHTTC----SCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcccCC----------cccccccccCchHhhCC----CCCCchhhhHhHHHHHHHHHHCCC
Confidence            332111          12345667888765322    123578899999999999999965


No 170
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.8e-34  Score=256.14  Aligned_cols=201  Identities=19%  Similarity=0.245  Sum_probs=159.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++.... ........+.+|+.+++.++||||+++++++...+..
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLL-DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETT-TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcC-CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            455789999999999999999999876 78999999997532 2456667889999999999999999999999999999


Q ss_pred             EEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ++||||+++++|.+++...  ....+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++...
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999999998642  24668999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ......          ....++..|++||.....     ......|+|+++++++|+..|
T Consensus       188 ~~~~~~----------~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~~l~~g  232 (310)
T 2wqm_A          188 SKTTAA----------HSLVGTPYYMSPERIHEN-----GYNFKSDIWSLGCLLYEMAAL  232 (310)
T ss_dssp             ---------------------CCSSCCHHHHTTC-----CCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCccc----------cccCCCeeEeChHHhCCC-----CCCchhhHHHHHHHHHHHHhC
Confidence            322111          112355667888765432     345789999999999999988


No 171
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.1e-34  Score=255.01  Aligned_cols=196  Identities=22%  Similarity=0.325  Sum_probs=165.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFL  178 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  178 (317)
                      .+.|++++.||+|+||.||+|.+.. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++......|+|
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   98 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   98 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECC-CCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            3679999999999999999998876 789999999976532 23457789999999999999999999999999999999


Q ss_pred             EcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCe
Q 042913          179 IDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTL  258 (317)
Q Consensus       179 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~  258 (317)
                      |||+++++|.+++..   ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.........
T Consensus        99 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  175 (303)
T 3a7i_A           99 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK  175 (303)
T ss_dssp             EECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred             EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence            999999999999854   56899999999999999999999999999999999999999999999999999765433211


Q ss_pred             eecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          259 VETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                                .....++..|++||....     .....+.|+|+++++++|+..|.
T Consensus       176 ----------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  216 (303)
T 3a7i_A          176 ----------RNTFVGTPFWMAPEVIKQ-----SAYDSKADIWSLGITAIELARGE  216 (303)
T ss_dssp             ----------BCCCCSCGGGCCHHHHTT-----CCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------cCccCCCcCccCHHHHhc-----CCCCchhhhHHHHHHHHHHccCC
Confidence                      111234455777776543     33456899999999999999984


No 172
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.8e-35  Score=254.39  Aligned_cols=199  Identities=17%  Similarity=0.214  Sum_probs=167.8

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec--
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS--  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  172 (317)
                      ..+..++|++.+.||+|+||.||+|.+.   +..||+|++..........+.+.+|+.+++.++||||+++++++...  
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEET---TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEEC---CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC
Confidence            4567789999999999999999999875   68899999987766667778899999999999999999999999876  


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      +..++||||+++++|.+++.......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.++|+|||++.
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            78899999999999999998765557999999999999999999999999  9999999999999999999999999875


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ......               ..++..|++||......  ........|+|++|++++|+..|
T Consensus       162 ~~~~~~---------------~~~t~~y~aPE~~~~~~--~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          162 SFQSPG---------------RMYAPAWVAPEALQKKP--EDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             TTSCTT---------------CBSCGGGSCHHHHHSCG--GGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             eecccC---------------ccCCccccChhhhccCC--CCCCCchhhHHHHHHHHHHHHhC
Confidence            432211               13345577777654321  12223479999999999999988


No 173
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.5e-34  Score=257.69  Aligned_cols=201  Identities=19%  Similarity=0.246  Sum_probs=167.4

Q ss_pred             CCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC------CcceE
Q 042913           92 SSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP------FLPTL  165 (317)
Q Consensus        92 ~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~  165 (317)
                      ...+.+..++|++.+.||+|+||.||+|.+...+++.||+|++...   ....+.+.+|+++++.++|+      +++++
T Consensus         6 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            6 CQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             CSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             eecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            3456777899999999999999999999985557899999999653   34456788899999888654      59999


Q ss_pred             EEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc--------
Q 042913          166 YAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE--------  237 (317)
Q Consensus       166 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~--------  237 (317)
                      ++++...+.+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.        
T Consensus        83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence            99999999999999999 999999998765567899999999999999999999999999999999999987        


Q ss_pred             -----------CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccc
Q 042913          238 -----------DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQY  306 (317)
Q Consensus       238 -----------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~  306 (317)
                                 ++.+||+|||+|+.......             ...++..|++||...     ........|+|+++++
T Consensus       162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~i  223 (339)
T 1z57_A          162 PKIKRDERTLINPDIKVVDFGSATYDDEHHS-------------TLVSTRHYRAPEVIL-----ALGWSQPCDVWSIGCI  223 (339)
T ss_dssp             ----CEEEEESCCCEEECCCSSCEETTSCCC-------------SSCSCGGGCCHHHHT-----TSCCCTHHHHHHHHHH
T ss_pred             CccccccccccCCCceEeeCcccccCccccc-------------cccCCccccChHHhh-----CCCCCcchhhHHHHHH
Confidence                       66899999999976433211             123445567776654     3345678999999999


Q ss_pred             ccccCCCC
Q 042913          307 SVEQPGGV  314 (317)
Q Consensus       307 ~~e~~~G~  314 (317)
                      ++|+..|.
T Consensus       224 l~el~~g~  231 (339)
T 1z57_A          224 LIEYYLGF  231 (339)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHHhCC
Confidence            99999994


No 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.7e-35  Score=264.77  Aligned_cols=197  Identities=21%  Similarity=0.270  Sum_probs=156.8

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEEEE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICFLI  179 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  179 (317)
                      ++|++++.||+|+||.||+|.+.. +++.||+|++..... ......+.+|+++++.++||||+++++++...+..++||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL-TDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC-CCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            689999999999999999999887 789999999965421 122224557999999999999999999999999999999


Q ss_pred             cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCCee
Q 042913          180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLV  259 (317)
Q Consensus       180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~  259 (317)
                      ||++ ++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.........
T Consensus        80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  157 (324)
T 3mtl_A           80 EYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  157 (324)
T ss_dssp             ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence            9995 6999888664 4568999999999999999999999999999999999999999999999999997654332211


Q ss_pred             ecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          260 ETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .          ...++..|++||.....    .......|+|++|++++|+..|.
T Consensus       158 ~----------~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~l~~g~  198 (324)
T 3mtl_A          158 D----------NEVVTLWYRPPDILLGS----TDYSTQIDMWGVGCIFYEMATGR  198 (324)
T ss_dssp             ---------------CGGGCCHHHHTTC----CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             c----------cccCcccccChhhhcCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence            1          12345557777754321    23467899999999999999994


No 175
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.6e-35  Score=261.81  Aligned_cols=204  Identities=22%  Similarity=0.331  Sum_probs=164.8

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      -..++|++++.||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+++++.++||||+++++++...+..+
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   92 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKE-TGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW   92 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETT-TCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcC-CCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence            345789999999999999999999887 7899999998654  3344567889999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      +||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus        93 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           93 IMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999999999988653 3568999999999999999999999999999999999999999999999999975421111


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                                .......++..|++||....+...........|+|++|++++|+..|.
T Consensus       172 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  219 (302)
T 2j7t_A          172 ----------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE  219 (302)
T ss_dssp             ----------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCC
Confidence                      011112455668888876433333344567899999999999999883


No 176
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=3.6e-35  Score=256.68  Aligned_cols=200  Identities=18%  Similarity=0.273  Sum_probs=166.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE--ecCEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE--VSHYIC  176 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~  176 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++..........+.+.+|+++++.++||||+++++++.  ....+|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECC-CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            4789999999999999999999887 7899999999876666677788999999999999999999999875  467899


Q ss_pred             EEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          177 FLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALG-----IIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~-----ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      +||||+++++|.+++...  ....+++..++.++.||+.||.|||+.+     |+||||||+|||++.++.+||+|||++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            999999999999998653  2345899999999999999999999999     999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +.........          ....++..|++||....     .....+.|+|+++++++|+..|.
T Consensus       164 ~~~~~~~~~~----------~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  213 (279)
T 2w5a_A          164 RILNHDTSFA----------KTFVGTPYYMSPEQMNR-----MSYNEKSDIWSLGCLLYELCALM  213 (279)
T ss_dssp             HHC---CHHH----------HHHHSCCTTCCHHHHHC-----C-CCHHHHHHHHHHHHHHHHHSS
T ss_pred             eeeccccccc----------cccCCCccccChHHhcc-----CCCCchhhHHHHHHHHHHHHHCC
Confidence            8764432111          11235567888876543     23457899999999999999883


No 177
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2e-34  Score=257.87  Aligned_cols=207  Identities=22%  Similarity=0.301  Sum_probs=166.8

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEE---cCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHL---RDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL  169 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  169 (317)
                      ....+..++|++++.||+|+||.||+|.+   ...+++.||+|++...  .....+.+.+|+++++.++||||+++++++
T Consensus        34 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  111 (326)
T 2w1i_A           34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVC  111 (326)
T ss_dssp             ---CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            34567778999999999999999999985   2336899999999764  345567889999999999999999999998


Q ss_pred             EecC--EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeec
Q 042913          170 EVSH--YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFD  247 (317)
Q Consensus       170 ~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG  247 (317)
                      ...+  .+++||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||
T Consensus       112 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg  190 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  190 (326)
T ss_dssp             CC----CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             EecCCCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCc
Confidence            6543  689999999999999999764 3568999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +++...........       .....+...|++||....     .......|+|+++++++|+..|.
T Consensus       191 ~~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~tg~  245 (326)
T 2w1i_A          191 LTKVLPQDKEYYKV-------KEPGESPIFWYAPESLTE-----SKFSVASDVWSFGVVLYELFTYI  245 (326)
T ss_dssp             TCEECCSSCSEEEC-------SSCCSCCGGGCCHHHHHH-----CEEEHHHHHHHHHHHHHHHHHTT
T ss_pred             chhhcccccccccc-------ccCCCCceeEECchhhcC-----CCCCchhhHHHHHHHHHHHHhcC
Confidence            99877554332111       111123344777776543     33467899999999999999883


No 178
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=9.7e-35  Score=257.14  Aligned_cols=202  Identities=22%  Similarity=0.319  Sum_probs=161.5

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhcCCCCcceEEEEE--EecCE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS--AKKLSHVQMEAEILSMLDHPFLPTLYAHL--EVSHY  174 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--~~~~~  174 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||+|++......  ......+.+|+++++.++||||+++++++  .....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSE-TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTT-TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEEECC-CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            5789999999999999999998876 7899999999765322  23457789999999999999999999998  44567


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .|+||||++++ |.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            99999999655 77777666667899999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....        ......++..|++||......   .....+.|+|+++++++|+..|
T Consensus       162 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~~~Di~slG~il~~l~~g  209 (305)
T 2wtk_C          162 FAADD--------TCRTSQGSPAFQPPEIANGLD---TFSGFKVDIWSAGVTLYNITTG  209 (305)
T ss_dssp             TCSSC--------EECCCCSCGGGCCHHHHTCCS---CEESHHHHHHHHHHHHHHHHHS
T ss_pred             ccccc--------ccccCCCCCCCcChhhccCcc---cCCcchhhHHHHHHHHHHHHhC
Confidence            22111        111123455667776553211   1225689999999999999998


No 179
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.2e-34  Score=255.92  Aligned_cols=202  Identities=17%  Similarity=0.192  Sum_probs=158.8

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE-EecCEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL-EVSHYI  175 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~  175 (317)
                      ..+|++.+.||+|+||.||+|.+....  ...+|+|.+.... .....+.+.+|+.+++.++||||+++++++ ..++..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            467999999999999999999875422  3368899886532 445667899999999999999999999985 456678


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus       103 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence            9999999999999999654 466899999999999999999999999999999999999999999999999999866432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....      .......++..|++||.     ........+.|+|+++++++|+..|
T Consensus       182 ~~~~~------~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~slG~il~~l~~~  228 (298)
T 3f66_A          182 EYYSV------HNKTGAKLPVKWMALES-----LQTQKFTTKSDVWSFGVLLWELMTR  228 (298)
T ss_dssp             GGCBC-----------CCBCGGGSCHHH-----HHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             chhcc------ccccCCCCCccccChHH-----hcCCCCChHHHHHHHHHHHHHHHhC
Confidence            21110      01111122334555554     4444556789999999999999884


No 180
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.8e-35  Score=260.61  Aligned_cols=212  Identities=20%  Similarity=0.226  Sum_probs=165.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE----e
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE----V  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~  171 (317)
                      .+..++|++.+.||+|+||.||+|.... +++.||+|++...  .....+.+.+|+++++.++||||+++++++.    .
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLH-DGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETT-TCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecC-CCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            3556799999999999999999999876 7899999998654  4456678899999999999999999999986    3


Q ss_pred             cCEEEEEEcccCCCChhcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQ--PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      ....|+||||+++++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            45789999999999999988652  3467999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ............ ...........++..|++||......  ......+.|+|+++++++|+..|
T Consensus       182 ~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~Di~slG~il~el~~g  242 (317)
T 2buj_A          182 NQACIHVEGSRQ-ALTLQDWAAQRCTISYRAPELFSVQS--HCVIDERTDVWSLGCVLYAMMFG  242 (317)
T ss_dssp             EESCEEEESHHH-HHHHHHHHHHHSCGGGCCGGGSSCCS--EEEECTHHHHHHHHHHHHHHHHS
T ss_pred             hhcccccccccc-cccccccccccCCcccCCHhHhccCC--CcCCCchhhHHHHHHHHHHHHhC
Confidence            765421110000 00000111223456677887654321  12235689999999999999988


No 181
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.6e-35  Score=264.85  Aligned_cols=201  Identities=24%  Similarity=0.244  Sum_probs=163.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      +..++|++.+.||+|+||.||+|.+.  +++.||||++..... ......+.+|+++++.++||||+++++++...+..+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  103 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL  103 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred             HHhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence            34468888899999999999999754  588999999976432 222236889999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          177 FLIDYCPNGDLHSLLPKQP--NNRFSLQAVRFFAAEVLVGLEYLHAL---GIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~LH~~---~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      +||||+++++|.+++....  ...+++..++.++.||+.||.|||+.   ||+||||||+|||++.++.+||+|||+|+.
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL  183 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence            9999999999999997653  23489999999999999999999999   999999999999999999999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..........         ...++..|++||...     ........|+|++|++++|+..|.
T Consensus       184 ~~~~~~~~~~---------~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~~g~  232 (326)
T 3uim_A          184 MDYKDTHVTT---------AVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQ  232 (326)
T ss_dssp             CCSSSSCEEC---------CCCSCGGGCCHHHHH-----HSEECHHHHHHHHHHHHHHHHHCC
T ss_pred             cCcccccccc---------cccCCcCccCHHHhc-----cCCCCccccchhHHHHHHHHHhCC
Confidence            6543322111         113455566666543     334567899999999999999983


No 182
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.5e-34  Score=261.17  Aligned_cols=208  Identities=18%  Similarity=0.192  Sum_probs=162.0

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----  172 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----  172 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||||++.... .......+.+|+++++.++||||+++++++...     
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   86 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKP-TGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF   86 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECC-CCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence            45799999999999999999999877 78999999996432 345556788999999999999999999987654     


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ...|+||||+ .++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        87 ~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           87 NEVYIIQELM-QTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             CCEEEEECCC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecc-CccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            6799999999 4799998865   46899999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      ...........+.........++..|++||....    ........|+|++|++++|+..|.|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~Di~slG~il~~l~~g~~  221 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT----SAKYSRAMDVWSCGCILAELFLRRP  221 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHS----CCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccccccCccccccchhhccccccccCCeeecc----CCCccchhhHHHHHHHHHHHHhCCC
Confidence            6443322211111111122234555666664321    2334678999999999999998843


No 183
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=2.6e-34  Score=251.71  Aligned_cols=203  Identities=21%  Similarity=0.277  Sum_probs=162.2

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++.+.||+|+||.||+|.+...  ++..||+|++.... .....+.+.+|+.+++.++||||+++++++..+ 
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-   85 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-   85 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-
Confidence            45678999999999999999999987642  23469999997653 345567899999999999999999999998754 


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            568999999999999999654 3568999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      ......         .....++..|++||..     .......+.|+|+++++++|+.. | .|
T Consensus       165 ~~~~~~---------~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          165 DEDYYK---------ASVTRLPIKWMSPESI-----NFRRFTTASDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             -----------------CCCCCGGGCCHHHH-----HHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cccccc---------cccCCCCcceeCchhh-----ccCCCCchhccHHHHHHHHHHHhCCCCC
Confidence            432111         1111233456677654     33345678999999999999987 7 44


No 184
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.5e-35  Score=260.86  Aligned_cols=205  Identities=19%  Similarity=0.250  Sum_probs=166.7

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCC----CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDC----TSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  170 (317)
                      .+..++|++.+.||+|+||.||+|.+...    ....||+|++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            46678999999999999999999988651    12479999997653 345567889999999999 8999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQP------------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED  238 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~  238 (317)
                      ..+.+++||||+++++|.+++....            ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence            9999999999999999999986431            3468999999999999999999999999999999999999999


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV  314 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~  314 (317)
                      +.+||+|||+|+..........        .....++..|++||....     .......|+|+++++++|+.. |.
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~t~g~  264 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIV--------KGNARLPVKWMAPESIFD-----CVYTVQSDVWSYGILLWEIFSLGL  264 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEE--------CSSCEECGGGSCHHHHHH-----CCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             CeEEECccccccccccccceee--------cCCCCCCccccCHHHhcc-----CCCChHHHHHHHHHHHHHHHcCCC
Confidence            9999999999976543322111        111123445777775542     335678999999999999997 73


No 185
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=7.5e-35  Score=272.13  Aligned_cols=201  Identities=22%  Similarity=0.282  Sum_probs=161.5

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ..+..++|++.+.||+|+||.||+|.+..  +..||||+++.....   .+.+.+|+++++.++||||+++++++.. +.
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECC--CceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence            45677899999999999999999998875  567999999765433   3568899999999999999999999876 67


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .|+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            89999999999999999754445689999999999999999999999999999999999999999999999999986643


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      .....         .....+...|++||....     .....+.|+|+++++++|+.. | .|
T Consensus       333 ~~~~~---------~~~~~~~~~y~aPE~~~~-----~~~~~~sDvwslG~~l~el~t~g~~P  381 (452)
T 1fmk_A          333 NEYTA---------RQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGRVP  381 (452)
T ss_dssp             -------------------CCGGGSCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             Cceec---------ccCCcccccccCHhHHhc-----CCCCccccHHhHHHHHHHHHhCCCCC
Confidence            22110         011123345777776542     234678999999999999998 6 44


No 186
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.9e-35  Score=261.21  Aligned_cols=202  Identities=18%  Similarity=0.219  Sum_probs=155.4

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceE----EEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANF----ALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|++++.||+|+||.||+|.+.. +++.+    ++|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   87 (327)
T 3lzb_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICL   87 (327)
T ss_dssp             EECCTTTEEEEEEEEECSSEEEEEEEECC-TTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE
T ss_pred             cccCHhHceEEEEeeeCCCeEEEEEEEcC-CCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe
Confidence            34667899999999999999999999876 56555    566554322 2334567889999999999999999999998


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ... .++|++|+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        88 ~~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           88 TST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             SSS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             cCC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            765 78899999999999999765 3569999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ...........        ....++..|++||...     ......+.|+|+++++++|+.. |
T Consensus       166 ~~~~~~~~~~~--------~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~ell~~g  216 (327)
T 3lzb_A          166 LLGAEEKEYHA--------EGGKVPIKWMALESIL-----HRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             ----------------------CCCGGGSCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             EccCccccccc--------cCCCccccccCHHHHc-----CCCCChHHHHHHHHHHHHHHHHCC
Confidence            76443221111        0112233466666543     3445678999999999999987 7


No 187
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=2.2e-34  Score=261.67  Aligned_cols=198  Identities=18%  Similarity=0.187  Sum_probs=162.3

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-----CE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-----HY  174 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~  174 (317)
                      ++|++++.||+|+||.||+|.+.. +++.||||++.... .......+.+|+++++.++||||+++++++...     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECC-CCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            689999999999999999998877 78999999997532 445567889999999999999999999998654     46


Q ss_pred             EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          175 ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .|+||||+ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       105 ~~iv~e~~-~~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          105 VYIVQDLM-ETDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             EEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEEccc-CcCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            89999999 5699998865   4599999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ......       ......++..|++||....    ........|+|+++++++|+..|.
T Consensus       181 ~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwslG~il~ell~g~  229 (364)
T 3qyz_A          181 DHDHTG-------FLTEYVATRWYRAPEIMLN----SKGYTKSIDIWSVGCILAEMLSNR  229 (364)
T ss_dssp             GGCBCC-------TTCCCCSCGGGCCHHHHHT----BCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCccc-------cccccccccCCCCCHHhcC----CCCCCcchhHHHHHHHHHHHHHCC
Confidence            322110       0111244555666665321    223467899999999999999994


No 188
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=4.1e-35  Score=261.58  Aligned_cols=206  Identities=17%  Similarity=0.167  Sum_probs=166.4

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcC----CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRD----CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHL  169 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  169 (317)
                      ...+..++|++.+.||+|+||.||+|.+..    .+++.||+|++.... .......+.+|+++++.++||||+++++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            345667899999999999999999998762    246789999997543 344556789999999999999999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcE
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQP--------NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHI  241 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~  241 (317)
                      ...+..++||||+++++|.+++....        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence            99999999999999999999986521        2457899999999999999999999999999999999999999999


Q ss_pred             EEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          242 MLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       242 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ||+|||+++..........        .....++..|++||...     ........|+|++|++++|+.. |
T Consensus       178 kl~Dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~el~~~g  237 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRK--------GGKGLLPVRWMSPESLK-----DGVFTTYSDVWSFGVVLWEIATLA  237 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEG--------GGSSEECGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             EECcCcccccccccccccc--------ccCCCCCCCccChhhhc-----cCCCCchhhHHHHHHHHHHHHhcC
Confidence            9999999976543221111        11112234466666543     3335678999999999999987 5


No 189
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.9e-34  Score=264.21  Aligned_cols=199  Identities=22%  Similarity=0.263  Sum_probs=163.9

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--------CCCcce
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--------HPFLPT  164 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~~iv~  164 (317)
                      ..+.+..++|++++.||+|+||.||+|.+.. +++.||||++...   ....+.+.+|+++++.++        |+||++
T Consensus        30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQ-GKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             ehhhhcCCeEEEEEEeeecCCeeEEEEEecC-CCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            3456667899999999999999999998877 7899999999753   344567889999999885        788999


Q ss_pred             EEEEEE----ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCC
Q 042913          165 LYAHLE----VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDG  239 (317)
Q Consensus       165 ~~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~  239 (317)
                      +++++.    ....+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            999987    556899999999 77777777665557799999999999999999999998 999999999999998775


Q ss_pred             -------------------------------------------------cEEEeeecccccCCCCCCeeecccccccccc
Q 042913          240 -------------------------------------------------HIMLSDFDLCFQSDVVPTLVETNVGSATRRR  270 (317)
Q Consensus       240 -------------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~  270 (317)
                                                                       .+||+|||+|+......             .
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-------------~  251 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-------------T  251 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-------------C
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-------------c
Confidence                                                             79999999997654321             1


Q ss_pred             cccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          271 RRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       271 ~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ...++..|++||....     ......+|+|+++++++|+..|.
T Consensus       252 ~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~elltg~  290 (397)
T 1wak_A          252 EDIQTRQYRSLEVLIG-----SGYNTPADIWSTACMAFELATGD  290 (397)
T ss_dssp             SCCSCGGGCCHHHHHT-----SCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCcccCChhhcC-----CCCCcHHHHHHHHHHHHHHhhCC
Confidence            1134556777776543     33457899999999999999993


No 190
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.2e-34  Score=281.79  Aligned_cols=197  Identities=19%  Similarity=0.318  Sum_probs=164.6

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+.+..++|++.+.||+|+||.||+|.+...+++.||||++.... .......+.+|+++++.++||||+++++++...
T Consensus        73 ~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           73 NPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHT  151 (681)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEE
T ss_pred             CCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeec
Confidence            4556777999999999999999999999875468999999986532 345567788999999999999999999999876


Q ss_pred             CE-----EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeec
Q 042913          173 HY-----ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFD  247 (317)
Q Consensus       173 ~~-----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG  247 (317)
                      +.     .|+||||+++++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||
T Consensus       152 ~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG  226 (681)
T 2pzi_A          152 DRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG  226 (681)
T ss_dssp             CTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred             CCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecc
Confidence            65     7999999999999988743    69999999999999999999999999999999999999875 99999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +++......              ...++.+|++||.....      ...+.|+|+++++++|+..|.|
T Consensus       227 ~a~~~~~~~--------------~~~gt~~y~aPE~~~~~------~~~~sDi~slG~~l~~l~~g~~  274 (681)
T 2pzi_A          227 AVSRINSFG--------------YLYGTPGFQAPEIVRTG------PTVATDIYTVGRTLAALTLDLP  274 (681)
T ss_dssp             TCEETTCCS--------------CCCCCTTTSCTTHHHHC------SCHHHHHHHHHHHHHHHHSCCC
T ss_pred             cchhcccCC--------------ccCCCccccCHHHHcCC------CCCceehhhhHHHHHHHHhCCC
Confidence            998765431              12466778888876432      2678999999999999998855


No 191
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=5.8e-34  Score=251.32  Aligned_cols=202  Identities=23%  Similarity=0.283  Sum_probs=168.1

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-------hcHHHHHHHHHHHHHHHhcC-CCCcceEEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-------LSAKKLSHVQMEAEILSMLD-HPFLPTLYAHL  169 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~  169 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||||++....       ......+.+.+|+++++.+. ||||+++++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcC-cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            45899999999999999999999877 78999999997542       11234567889999999996 99999999999


Q ss_pred             EecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccc
Q 042913          170 EVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLC  249 (317)
Q Consensus       170 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a  249 (317)
                      ...+..++||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence            9999999999999999999999653  56899999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCeeecccccccccccccccCCCCCccccccccc-ceeccchhhhccCCcccccccCCC
Q 042913          250 FQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM-EFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .........           ....++..|++||....... .........|+|+++++++|+..|
T Consensus       172 ~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  225 (298)
T 1phk_A          172 CQLDPGEKL-----------REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG  225 (298)
T ss_dssp             EECCTTCCB-----------CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             hhcCCCccc-----------ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence            876543211           11234556777776542211 122346789999999999999988


No 192
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.5e-34  Score=257.07  Aligned_cols=204  Identities=21%  Similarity=0.260  Sum_probs=165.5

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLE  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~  170 (317)
                      .+..++|++.+.||+|+||.||+|.+.    ..+++.||+|++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  101 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT  101 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence            456689999999999999999999863    2367899999997653 345557889999999999 6999999999987


Q ss_pred             ecC-EEEEEEcccCCCChhcccccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE
Q 042913          171 VSH-YICFLIDYCPNGDLHSLLPKQPN--------------NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL  235 (317)
Q Consensus       171 ~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill  235 (317)
                      ..+ .+++||||+++++|.+++.....              ..+++..++.++.||+.||.|||+.||+||||||+|||+
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~  181 (316)
T 2xir_A          102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  181 (316)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE
Confidence            654 58999999999999999976432              128899999999999999999999999999999999999


Q ss_pred             ccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          236 REDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       236 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      +.++.+||+|||+++..........        .....++..|++||...     ......+.|+|+++++++|+.. |
T Consensus       182 ~~~~~~kl~Dfg~~~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~t~g  247 (316)
T 2xir_A          182 SEKNVVKICDFGLARDIYKDPDYVR--------KGDARLPLKWMAPETIF-----DRVYTIQSDVWSFGVLLWEIFSLG  247 (316)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEE--------ETTEEECGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCCCEEECCCccccccccCcccee--------ccCCCcceeecCchhhc-----cccccchhHHHHHHHHHHHHHhCC
Confidence            9999999999999987654332111        11123344577777653     2334678999999999999986 7


No 193
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=8.8e-35  Score=277.00  Aligned_cols=200  Identities=23%  Similarity=0.295  Sum_probs=164.1

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++.+.||+|+||.||+|.+..  +..||||+++.....   .+.+.+|+++|+.++|+||+++++++.. +.+
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETT--TEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECC--CceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            4566889999999999999999998875  577999999765432   3568899999999999999999999876 678


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      |+||||+++|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||+++.....
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  416 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  416 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence            99999999999999997544456899999999999999999999999999999999999999999999999999865432


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      ..         .......+...|++||....     .....+.|+|+++++++|+.. | .|
T Consensus       417 ~~---------~~~~~~~~~~~y~aPE~~~~-----~~~~~~sDvwSlGv~l~el~t~g~~P  464 (535)
T 2h8h_A          417 EY---------TARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGRVP  464 (535)
T ss_dssp             HH---------HTTCSTTSCGGGSCHHHHHH-----CCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred             ce---------ecccCCcCcccccCHHHhcc-----CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            10         00111123345777776542     334578999999999999998 6 44


No 194
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.7e-35  Score=271.72  Aligned_cols=197  Identities=21%  Similarity=0.271  Sum_probs=156.0

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe----
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV----  171 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----  171 (317)
                      .....+|++++.||+|+||.||+|.+.. +++.||||++....      ....+|+++++.++||||+++++++..    
T Consensus        50 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~  122 (420)
T 1j1b_A           50 RPQEVSYTDTKVIGNGSFGVVYQAKLCD-SGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK  122 (420)
T ss_dssp             CCEEEEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT
T ss_pred             CcccceEEeeeEEeeCCCEEEEEEEECC-CCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCC
Confidence            3445689999999999999999999887 78999999986542      223469999999999999999998853    


Q ss_pred             --cCEEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeee
Q 042913          172 --SHYICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-GHIMLSDF  246 (317)
Q Consensus       172 --~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-~~~kl~DF  246 (317)
                        ..++++||||++ ++|.+++..  .....+++..++.++.||+.||.|||++||+||||||+||||+.+ +.+||+||
T Consensus       123 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DF  201 (420)
T 1j1b_A          123 KDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF  201 (420)
T ss_dssp             TTEEEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CcceeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccc
Confidence              234789999995 566665542  234679999999999999999999999999999999999999965 57899999


Q ss_pred             cccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          247 DLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       247 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      |+|+.+......           ....++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       202 G~a~~~~~~~~~-----------~~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlG~il~ell~G~~  255 (420)
T 1j1b_A          202 GSAKQLVRGEPN-----------VSYICSRYYRAPELIFGA----TDYTSSIDVWSAGCVLAELLLGQP  255 (420)
T ss_dssp             TTCEECCTTCCC-----------CSCCSCTTSCCHHHHTTC----SSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             hhhhhcccCCCc-----------eeeeeCCCcCCHHHHcCC----CCCCchhhhHHHHHHHHHHHhCCC
Confidence            999876432211           112345668888866422    134578999999999999999943


No 195
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=2e-34  Score=250.86  Aligned_cols=195  Identities=21%  Similarity=0.346  Sum_probs=152.5

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc--HHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS--AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+..++|++.+.||+|+||.||+|.+.   +..||+|++......  ....+.+.+|+++++.++||||+++++++...+
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP   79 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET---TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc---CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            356689999999999999999999865   689999998764322  234567899999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CeeccCCCCcEEEcc--------CCcEE
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG---IIYRDLKPENILLRE--------DGHIM  242 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivHrDikp~Nill~~--------~~~~k  242 (317)
                      ..++||||+++++|.+++..   ..+++..++.++.||+.||.|||++|   |+||||||+|||++.        ++.+|
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             ceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            99999999999999999853   56999999999999999999999999   899999999999986        67899


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |+|||+++........            ...++..|++||..     .........|+|+++++++|+..|
T Consensus       157 l~Dfg~~~~~~~~~~~------------~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~~l~~l~~g  210 (271)
T 3dtc_A          157 ITDFGLAREWHRTTKM------------SAAGAYAWMAPEVI-----RASMFSKGSDVWSYGVLLWELLTG  210 (271)
T ss_dssp             ECCCCC-------------------------CCGGGSCHHHH-----HHCCCSHHHHHHHHHHHHHHHHHC
T ss_pred             EccCCccccccccccc------------CCCCccceeCHHHh-----ccCCCCchhhHHHHHHHHHHHHhC
Confidence            9999999765432211            11344556666654     333456789999999999999988


No 196
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=1.5e-34  Score=280.19  Aligned_cols=201  Identities=18%  Similarity=0.238  Sum_probs=159.4

Q ss_pred             ccCCeEEe-eeecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           98 HLRHLKLV-RHLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        98 ~~~~y~i~-~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      ....+.+. +.||+|+||.||+|.+.. ..++.||||+++.........+.+.+|+++++.++||||+++++++.. +.+
T Consensus       366 ~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~  444 (635)
T 4fl3_A          366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESW  444 (635)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSE
T ss_pred             cchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCE
Confidence            34455554 489999999999996642 256889999998765555666789999999999999999999999864 458


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      ++||||+++|+|.+++..  ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+.+...
T Consensus       445 ~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~  522 (635)
T 4fl3_A          445 MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  522 (635)
T ss_dssp             EEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred             EEEEEccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence            899999999999999965  367999999999999999999999999999999999999999999999999999876543


Q ss_pred             CCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          256 PTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ........       ...++..|++||..     .......+.|+|+++++++|+.. |
T Consensus       523 ~~~~~~~~-------~~~~t~~y~APE~~-----~~~~~~~~sDvwSlGv~l~ellt~G  569 (635)
T 4fl3_A          523 ENYYKAQT-------HGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYG  569 (635)
T ss_dssp             -------------------CGGGSCHHHH-----HHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccccc-------CCCCceeeeChhhh-----cCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            32111100       11223346666654     44445678999999999999987 7


No 197
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.8e-34  Score=255.68  Aligned_cols=216  Identities=20%  Similarity=0.231  Sum_probs=175.7

Q ss_pred             CCcchhhHHHhhccCCCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh--hcHHHHHHHHHHHHHHH
Q 042913           78 SDLHWSAIKAATNLSSNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--LSAKKLSHVQMEAEILS  155 (317)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~  155 (317)
                      ..+.+.++..+++++....+    |...+.||+|+||.||+|.+.   ++.||+|++....  ......+.+.+|+.+++
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~----~~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~   85 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPI----SVGGNKMGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMA   85 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBT----TTTCCEEEECSSEEEEEEESS---SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHcccccccc----cccCCccccCCCeEEEEEEEC---CceEEEEEEecccCcchHHHHHHHHHHHHHHH
Confidence            45678888888887776533    555678999999999999753   6899999986532  12345677899999999


Q ss_pred             hcCCCCcceEEEEEEecCEEEEEEcccCCCChhcccccC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEE
Q 042913          156 MLDHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQ-PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENIL  234 (317)
Q Consensus       156 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nil  234 (317)
                      .++||||+++++++...+..++||||+++++|.+++... ....+++..++.++.||+.||.|||+.||+||||||+|||
T Consensus        86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil  165 (307)
T 2nru_A           86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANIL  165 (307)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             hcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence            999999999999999999999999999999999998643 2356899999999999999999999999999999999999


Q ss_pred             EccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          235 LREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       235 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ++.++.+||+|||+++.........        ......++..|++||.....      ...+.|+|++|++++|+..|.
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~------~~~~~Dv~slG~il~~l~~g~  231 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTV--------MTSRIVGTTAYMAPEALRGE------ITPKSDIYSFGVVLLEIITGL  231 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCE--------ECSSCCSCGGGCCHHHHTTE------ECTHHHHHHHHHHHHHHHHCC
T ss_pred             EcCCCcEEEeecccccccccccccc--------cccccCCCcCcCChHHhcCC------CCccchhHHHHHHHHHHHHCC
Confidence            9999999999999998665432211        11122456678888865432      456889999999999999984


No 198
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.1e-34  Score=254.12  Aligned_cols=195  Identities=24%  Similarity=0.322  Sum_probs=162.7

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++....  ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL   83 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhccceeeeeccCCCCceEEEEEECC-CCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence            45789999999999999999999876 78999999997642  2334568899999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~~~  254 (317)
                      ||||+++++|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+++....
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           84 VMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             EECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             EEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            99999999999998653  568999999999999999999999999999999999999   7788999999999875432


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ..            .....++..|++||....     .......|+|++|++++|+..|.
T Consensus       162 ~~------------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g~  204 (304)
T 2jam_A          162 GI------------MSTACGTPGYVAPEVLAQ-----KPYSKAVDCWSIGVITYILLCGY  204 (304)
T ss_dssp             BT------------THHHHSCCCBCCTTTBSS-----CSCCHHHHHHHHHHHHHHHHHSS
T ss_pred             Cc------------cccccCCCCccChHHhcc-----CCCCchhhHHHHHHHHHHHHHCC
Confidence            11            011235566777776543     33467899999999999999983


No 199
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-34  Score=253.02  Aligned_cols=203  Identities=18%  Similarity=0.197  Sum_probs=160.3

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE-E
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI-C  176 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~  176 (317)
                      -.|++.+.||+|+||.||+|.+...  .+..||+|++.... .....+.+.+|+.+++.++||||+++++++...+.. +
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   99 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence            4677889999999999999987541  23379999986532 445667889999999999999999999999766554 9


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      +||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus       100 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          100 VLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             EEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            999999999999999653 4668999999999999999999999999999999999999999999999999997654322


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ....      .......++..|++||..     .......+.|+|+++++++|+..| .|
T Consensus       179 ~~~~------~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g~~~  227 (298)
T 3pls_A          179 YYSV------QQHRHARLPVKWTALESL-----QTYRFTTKSDVWSFGVLLWELLTRGAP  227 (298)
T ss_dssp             GGCS------CCSSCTTCGGGGSCHHHH-----TTCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             cccc------ccCcCCCCCccccChhhh-----ccCCCChhhchhhHHHHHHHHhhCCCC
Confidence            1100      111112233345555544     444456789999999999999884 44


No 200
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.4e-34  Score=258.40  Aligned_cols=199  Identities=21%  Similarity=0.234  Sum_probs=161.5

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc---CCCCcceEEEEEE-----
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML---DHPFLPTLYAHLE-----  170 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~-----  170 (317)
                      .++|++.+.||+|+||.||+|.+...+++.||+|++............+.+|+.+++.+   +||||+++++++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            47899999999999999999998644788999999975433222223455677777665   8999999999987     


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ....+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            5677999999995 799999987656679999999999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .......           .....++..|++||.....     ......|+|+++++++|+..|.
T Consensus       169 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~~l~~g~  216 (326)
T 1blx_A          169 IYSFQMA-----------LTSVVVTLWYRAPEVLLQS-----SYATPVDLWSVGCIFAEMFRRK  216 (326)
T ss_dssp             CCCGGGG-----------GCCCCCCCTTCCHHHHTTC-----CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCCC-----------ccccccccceeCHHHHhcC-----CCCcchhHHHHHHHHHHHHcCC
Confidence            6543211           1122455667777766432     3457899999999999999884


No 201
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.1e-34  Score=262.48  Aligned_cols=193  Identities=19%  Similarity=0.287  Sum_probs=161.0

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE---
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI---  175 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---  175 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||||++............+.+|+.+++.++||||+++++++...+..   
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECC-CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            4799999999999999999999887 899999999987666667778899999999999999999999999876654   


Q ss_pred             ---EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          176 ---CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       176 ---~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                         |+||||+ .++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       120 ~~~~lv~e~~-~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          120 YDFYLVMPFM-QTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  194 (371)
T ss_dssp             CCCEEEEECC-CEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred             eeEEEEEccc-cccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence               9999999 478888873    34999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +....             ...++..|++||....    ........|+|+++++++|+..|.
T Consensus       195 ~~~~~-------------~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~el~~g~  239 (371)
T 4exu_A          195 DAEMT-------------GYVVTRWYRAPEVILS----WMHYNQTVDIWSVGCIMAEMLTGK  239 (371)
T ss_dssp             ------------------CTTCCCTTSCHHHHSC----CSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccCcC-------------CcccCccccCHHHhcC----CCCCCcHHhHHHHHHHHHHHHhCC
Confidence            43211             1234556777776532    133467899999999999999993


No 202
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.9e-34  Score=278.69  Aligned_cols=203  Identities=21%  Similarity=0.254  Sum_probs=160.5

Q ss_pred             ccccCCeEEee-eecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           96 KLHLRHLKLVR-HLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        96 ~~~~~~y~i~~-~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      .+...++.+.+ .||+|+||.||+|.+.. ..+..||||+++... .....+.+.+|+++|+.++||||+++++++.. +
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence            34556777777 89999999999998763 245679999997642 23445778999999999999999999999876 5


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+++||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+...
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~  487 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG  487 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred             CeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence            689999999999999998654 4569999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ........       .....+...|++||....     .....+.|+|++|++++|+.. |
T Consensus       488 ~~~~~~~~-------~~~~~~~~~y~APE~~~~-----~~~~~~sDvwSlGv~l~ellt~G  536 (613)
T 2ozo_A          488 ADDSYYTA-------RSAGKWPLKWYAPECINF-----RKFSSRSDVWSYGVTMWEALSYG  536 (613)
T ss_dssp             ---------------------CCTTSCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCceeee-------ccCCCCccceeCHhhhcC-----CCCCcHHHHHHHHHHHHHHHHCC
Confidence            43221111       011122346788876642     344678999999999999986 7


No 203
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.3e-34  Score=261.35  Aligned_cols=208  Identities=19%  Similarity=0.225  Sum_probs=158.4

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcC--CCCceEEEEEeehhhhcH---------HHHHHHHHHHHHHHhcCCCCcceE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRD--CTSANFALKVVDKDLLSA---------KKLSHVQMEAEILSMLDHPFLPTL  165 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~  165 (317)
                      +..++|++.+.||+|+||.||+|.+..  .++..||+|++.......         .....+.+|+.+++.++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            445799999999999999999998864  246789999987542111         111235678889999999999999


Q ss_pred             EEEEEe----cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC--
Q 042913          166 YAHLEV----SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG--  239 (317)
Q Consensus       166 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~--  239 (317)
                      ++++..    ....|+||||+ +++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++  
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  190 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD  190 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence            999987    78899999999 99999999764  4799999999999999999999999999999999999999877  


Q ss_pred             cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .+||+|||+|+.+.........   .........++..|++||...     ......+.|+|+++++++|+..| .|
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~il~ell~g~~p  259 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQY---QENPRKGHNGTIEFTSLDAHK-----GVALSRRSDVEILGYCMLRWLCGKLP  259 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCC---CCCGGGCSCSCTTTCCHHHHH-----TCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cEEEEeCCCceecccccccccc---hhccccccCCCccccCHHHhc-----CCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999876543221100   001112234566677777554     33457899999999999999998 44


No 204
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.4e-34  Score=264.63  Aligned_cols=195  Identities=22%  Similarity=0.313  Sum_probs=156.0

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe------
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV------  171 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------  171 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||||++....      ....+|+++++.++||||+++++++..      
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIE-SGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETT-TCCEEEEEEEECCT------TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECC-CCCEEEEEEEecCc------chHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            45789999999999999999999877 89999999986542      123469999999999999999999843      


Q ss_pred             --------------------------------cCEEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHH
Q 042913          172 --------------------------------SHYICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEY  217 (317)
Q Consensus       172 --------------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~  217 (317)
                                                      ..++++||||++ ++|.+.+..  .....+++..++.++.||+.||.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            345899999995 687777653  235679999999999999999999


Q ss_pred             HHHcCCeeccCCCCcEEEc-cCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccch
Q 042913          218 LHALGIIYRDLKPENILLR-EDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPR  296 (317)
Q Consensus       218 LH~~~ivHrDikp~Nill~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~  296 (317)
                      ||++||+||||||+|||++ .++.+||+|||+|+.........           ...++..|++||.....    .....
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~  221 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV-----------AYICSRFYRAPELMLGA----TEYTP  221 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC-----------CCCCCSSCCCHHHHTTC----SSCCT
T ss_pred             HHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc-----------CcccCCCccCHHHhcCC----CCCCc
Confidence            9999999999999999998 68899999999998764433211           11344557777765321    22457


Q ss_pred             hhhccCCcccccccCCCCC
Q 042913          297 REQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       297 ~~~~~~~~~~~~e~~~G~p  315 (317)
                      ..|+|++|++++|+..|.|
T Consensus       222 ~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          222 SIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             HHHHHHHHHHHHHHHHSSC
T ss_pred             chhhhhHHHHHHHHHhCCC
Confidence            8999999999999999943


No 205
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=5.7e-34  Score=253.49  Aligned_cols=202  Identities=21%  Similarity=0.258  Sum_probs=157.8

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE----
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE----  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----  170 (317)
                      +....++|++++.||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+++++.++||||+++++++.    
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   82 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDND-CDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGS   82 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETT-TTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSC
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECC-CCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccc
Confidence            34456899999999999999999999887 7899999998754  4556678899999999999999999999873    


Q ss_pred             ----------ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCC
Q 042913          171 ----------VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDG  239 (317)
Q Consensus       171 ----------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~  239 (317)
                                .....|+||||++ ++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  158 (320)
T 2i6l_A           83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL  158 (320)
T ss_dssp             BCCC----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTT
T ss_pred             ccccccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC
Confidence                      4478999999995 799999854   5689999999999999999999999999999999999997 567


Q ss_pred             cEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          240 HIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       240 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      .+||+|||+++..........       ......++..|++||.....    .......|+|+++++++|+..|.
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~il~el~~g~  222 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKG-------HLSEGLVTKWYRSPRLLLSP----NNYTKAIDMWAAGCIFAEMLTGK  222 (320)
T ss_dssp             EEEECCCTTCBCC---------------CCCGGGSCCTTCCHHHHHCT----TCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             eEEEccCccccccCCCccccc-------ccccccccccccCcHHhcCc----ccCCchhhhHhHHHHHHHHHhCC
Confidence            999999999987653221111       11122345667888765321    23457899999999999999983


No 206
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.9e-34  Score=254.41  Aligned_cols=196  Identities=23%  Similarity=0.331  Sum_probs=159.2

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||+|++....    ..+.+.+|+.+++.++||||+++++++...+.+|
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKE-TGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETT-TCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECC-CCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            456789999999999999999999876 78999999997642    2356788999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      +||||+++++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.......
T Consensus       101 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             EEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             EEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            999999999999998633 4678999999999999999999999999999999999999999999999999997654322


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ..          .....++..|++||....     .......|+|+++++++|+..|
T Consensus       180 ~~----------~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~~g  221 (314)
T 3com_A          180 AK----------RNTVIGTPFWMAPEVIQE-----IGYNCVADIWSLGITAIEMAEG  221 (314)
T ss_dssp             SC----------BCCCCSCGGGCCHHHHSS-----SCBCTTHHHHHHHHHHHHHHHS
T ss_pred             cc----------cCccCCCCCccChhhcCC-----CCCCccccHHHHHHHHHHHHhC
Confidence            11          111234455677766543     3355788999999999999998


No 207
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.4e-35  Score=260.49  Aligned_cols=198  Identities=21%  Similarity=0.283  Sum_probs=147.3

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEecC---
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEVSH---  173 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~---  173 (317)
                      .++|++.+.||+|+||.||+|.+.   ++.||||++...     ....+.+|.+++..  ++||||+++++++....   
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~   73 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CT---TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred             cceeeehhhccCCCCeEEEEEEEc---CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence            468999999999999999999654   789999998653     22456678888877  78999999999998776   


Q ss_pred             -EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcEEEe
Q 042913          174 -YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH--------ALGIIYRDLKPENILLREDGHIMLS  244 (317)
Q Consensus       174 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH--------~~~ivHrDikp~Nill~~~~~~kl~  244 (317)
                       .+++||||+++|+|.+++..   ..+++..++.++.|++.||.|||        +.||+||||||+|||++.++.+||+
T Consensus        74 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEEEEEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             ceeEEEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence             89999999999999999965   35888889999999999999999        9999999999999999999999999


Q ss_pred             eecccccCCCCCCeeecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC
Q 042913          245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |||+|+...........      ......++..|++||.......... ....+.|+|+++++++|+..|
T Consensus       151 DFg~a~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  214 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDI------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  214 (303)
T ss_dssp             CCCC-CCEETTTTEESC------C-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred             ecCcceeccCCCccccc------ccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence            99999765443332111      1112246667888887654322211 334678999999999999988


No 208
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=5.5e-35  Score=258.23  Aligned_cols=208  Identities=19%  Similarity=0.263  Sum_probs=148.6

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      ..+..++|++.+.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAP-KKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred             cccchhhhhhhheeccccceEEEEEEECC-CCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence            45677899999999999999999998776 68999999986543 23445678899999999999999999999999999


Q ss_pred             EEEEEcccCCCChhccccc------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecc
Q 042913          175 ICFLIDYCPNGDLHSLLPK------QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDL  248 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~------~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~  248 (317)
                      .++||||+++++|.+++..      .....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            9999999999999999863      1245689999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +............     .......++..|++||.....    .......|+|+++++++|+..|
T Consensus       168 ~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~g  223 (303)
T 2vwi_A          168 SAFLATGGDITRN-----KVRKTFVGTPCWMAPEVMEQV----RGYDFKADIWSFGITAIELATG  223 (303)
T ss_dssp             HHHCC--------------------CCCTTCCHHHHHHH----HCCCTHHHHHHHHHHHHHHHHS
T ss_pred             hheeccCCCccch-----hhhcccCCCccccCHHHhccc----cCCCchhhHHHHHHHHHHHHhC
Confidence            9776543221110     011122455567777755321    2246789999999999999988


No 209
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=3.1e-34  Score=252.02  Aligned_cols=196  Identities=27%  Similarity=0.374  Sum_probs=167.1

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..++|++++.||+|+||.||+|.+.. +++.||+|++............+.+|+++++.++||||+++++++...+.+++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcC-CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            35789999999999999999999876 78999999998765444556788999999999999999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED---GHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~---~~~kl~DFG~a~~~~~  254 (317)
                      ||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+|+||||+||+++.+   +.+||+|||++.....
T Consensus        99 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A           99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             EEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence            99999999999988653  568999999999999999999999999999999999999754   4799999999976543


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....           ....++..|++||.....      ...+.|+|+++++++|+..|
T Consensus       177 ~~~~-----------~~~~~~~~y~aPE~~~~~------~~~~~Di~slG~~l~~l~~g  218 (287)
T 2wei_A          177 NTKM-----------KDRIGTAYYIAPEVLRGT------YDEKCDVWSAGVILYILLSG  218 (287)
T ss_dssp             CSSC-----------SCHHHHHTTCCHHHHTTC------CCTHHHHHHHHHHHHHHHHS
T ss_pred             CCcc-----------ccccCcccccChHHhcCC------CCCchhhHhHHHHHHHHHhC
Confidence            3211           112355678888876532      45688999999999999988


No 210
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=4.3e-34  Score=257.70  Aligned_cols=204  Identities=20%  Similarity=0.274  Sum_probs=168.9

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH---------------HHHHHHHHHHHHHhc
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK---------------KLSHVQMEAEILSML  157 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l  157 (317)
                      ..+.+..++|++.+.||+|+||.||+|.+   +++.||+|++........               ..+.+.+|+.+++.+
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  100 (348)
T 2pml_X           24 KEKDKYINDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI  100 (348)
T ss_dssp             SSSCEEETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC
T ss_pred             hhcccccCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC
Confidence            44566779999999999999999999988   489999999976533221               126789999999999


Q ss_pred             CCCCcceEEEEEEecCEEEEEEcccCCCChhcc------cccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCC
Q 042913          158 DHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSL------LPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKP  230 (317)
Q Consensus       158 ~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp  230 (317)
                      +||||+++++++...+..++||||+++++|.++      +.......+++..++.++.||+.||.|||+ .||+||||||
T Consensus       101 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p  180 (348)
T 2pml_X          101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKP  180 (348)
T ss_dssp             CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCG
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCCh
Confidence            999999999999999999999999999999999      655446789999999999999999999999 9999999999


Q ss_pred             CcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCccccccc
Q 042913          231 ENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQ  310 (317)
Q Consensus       231 ~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  310 (317)
                      +|||++.++.+||+|||++.......            .....++..|++||......   .......|+|+++++++|+
T Consensus       181 ~Nil~~~~~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~---~~~~~~~Di~slG~il~~l  245 (348)
T 2pml_X          181 SNILMDKNGRVKLSDFGESEYMVDKK------------IKGSRGTYEFMPPEFFSNES---SYNGAKVDIWSLGICLYVM  245 (348)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBTTE------------ECSSCSCGGGCCGGGGSSCC---CEEHHHHHHHHHHHHHHHH
T ss_pred             HhEEEcCCCcEEEecccccccccccc------------ccCCCCCcCccCchhhcCCC---CCCcchhhHHHHHHHHHHH
Confidence            99999999999999999997653321            11224555677777654321   1113489999999999999


Q ss_pred             CCCC
Q 042913          311 PGGV  314 (317)
Q Consensus       311 ~~G~  314 (317)
                      ..|.
T Consensus       246 ~~g~  249 (348)
T 2pml_X          246 FYNV  249 (348)
T ss_dssp             HHSS
T ss_pred             HhCC
Confidence            9983


No 211
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=3.2e-34  Score=256.90  Aligned_cols=212  Identities=19%  Similarity=0.191  Sum_probs=155.5

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEE----
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLE----  170 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~----  170 (317)
                      .+...+|++.+.||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+.+++.+. ||||+++++++.    
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVG-SGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECC-CCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            3455689999999999999999999877 7899999998654  4455677899999999996 999999999983    


Q ss_pred             ----ecCEEEEEEcccCCCChhccccc-CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEE
Q 042913          171 ----VSHYICFLIDYCPNGDLHSLLPK-QPNNRFSLQAVRFFAAEVLVGLEYLHALG--IIYRDLKPENILLREDGHIML  243 (317)
Q Consensus       171 ----~~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivHrDikp~Nill~~~~~~kl  243 (317)
                          ....+++||||+ +|+|.+++.. .....+++..++.++.||+.||.|||+.|  |+||||||+|||++.++.+||
T Consensus       101 ~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl  179 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL  179 (337)
T ss_dssp             TSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred             ccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEE
Confidence                345689999999 5899888854 22456999999999999999999999999  999999999999999999999


Q ss_pred             eeecccccCCCCCCeeeccc--ccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNV--GSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +|||+++.............  ..........++..|++||.....  .........|+|+++++++|+..|
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~~~Dv~slG~il~el~~g  249 (337)
T 3ll6_A          180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY--SNFPIGEKQDIWALGCILYLLCFR  249 (337)
T ss_dssp             CCCTTCBCCSSCC-------------------------------CC--TTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred             ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc--ccCCCChHHhHHHHHHHHHHHHhC
Confidence            99999987765433211100  000111123355567777765211  222345789999999999999988


No 212
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.1e-33  Score=248.77  Aligned_cols=174  Identities=12%  Similarity=0.060  Sum_probs=151.9

Q ss_pred             CCCc-cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           93 SNGK-LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        93 ~~~~-~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+. +..++|++.+.||+|+||.||+|.+.. +++.||||++...... ....+.+.+|+.+++.++||||+++++++.
T Consensus        23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~  101 (286)
T 3uqc_A           23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTA-LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH  101 (286)
T ss_dssp             CTTCEETTTTEEEEEEEEBSTTCEEEEEEETT-TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCCCEEecCcEEEEEEEcccCCeEEEEEEecC-CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE
Confidence            3344 667899999999999999999999876 7899999999865433 466678999999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      ..+..|+||||++|++|.+++..   + .....+..++.||+.||.|||++||+||||||+|||++.+|.+||+++|.. 
T Consensus       102 ~~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~-  176 (286)
T 3uqc_A          102 TRAGGLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATM-  176 (286)
T ss_dssp             ETTEEEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCC-
T ss_pred             ECCcEEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecccc-
Confidence            99999999999999999999943   2 355678889999999999999999999999999999999999999855432 


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                                                   +|            ...+.|+|+++++++|+..|
T Consensus       177 -----------------------------~~------------~~~~~Di~slG~il~elltg  198 (286)
T 3uqc_A          177 -----------------------------PD------------ANPQDDIRGIGASLYALLVN  198 (286)
T ss_dssp             -----------------------------TT------------CCHHHHHHHHHHHHHHHHHS
T ss_pred             -----------------------------CC------------CCchhHHHHHHHHHHHHHHC
Confidence                                         11            35788999999999999988


No 213
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.6e-34  Score=258.21  Aligned_cols=190  Identities=15%  Similarity=0.114  Sum_probs=153.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh------cHHHHHHHHHHHHHHHhcC---------CCC
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------SAKKLSHVQMEAEILSMLD---------HPF  161 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~~  161 (317)
                      +..++|++++.||+|+||+||+|.+   +++.||||++.....      .....+.+.+|+.+++.++         |+|
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~n   93 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEG   93 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCC
T ss_pred             cccccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCc
Confidence            4457899999999999999999987   369999999976532      2233467888999988885         888


Q ss_pred             cceEEEEEE------------------------------ecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHH
Q 042913          162 LPTLYAHLE------------------------------VSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEV  211 (317)
Q Consensus       162 iv~~~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi  211 (317)
                      |+++++.+.                              ..+.+|+||||+++|++.+.+.+   ..+++..++.++.||
T Consensus        94 iv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           94 FIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQL  170 (336)
T ss_dssp             BCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHH
T ss_pred             hhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHH
Confidence            888888753                              26789999999999977776633   568999999999999


Q ss_pred             HHHHHHHH-HcCCeeccCCCCcEEEccCC--------------------cEEEeeecccccCCCCCCeeecccccccccc
Q 042913          212 LVGLEYLH-ALGIIYRDLKPENILLREDG--------------------HIMLSDFDLCFQSDVVPTLVETNVGSATRRR  270 (317)
Q Consensus       212 ~~al~~LH-~~~ivHrDikp~Nill~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~  270 (317)
                      +.||.||| ++||+||||||+|||++.++                    .+||+|||+|+.....               
T Consensus       171 ~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------------  235 (336)
T 2vuw_A          171 TASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------------  235 (336)
T ss_dssp             HHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------------
T ss_pred             HHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------------
Confidence            99999999 99999999999999999887                    8999999999865431               


Q ss_pred             cccccCCCCCcccccccccceeccchhhhccCCccc-ccccCCC
Q 042913          271 RRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQY-SVEQPGG  313 (317)
Q Consensus       271 ~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~G  313 (317)
                      ...++..|++||...+..      ....|+|++..+ ..++..|
T Consensus       236 ~~~gt~~y~aPE~~~g~~------~~~~Diwsl~~~~~~~~~~g  273 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGDG------DYQFDIYRLMKKENNNRWGE  273 (336)
T ss_dssp             EEECCCCTTCSGGGCCCS------SHHHHHHHHHHHHHTTCTTS
T ss_pred             cEEEeecccChhhhcCCC------ccceehhhhhCCCCcccccc
Confidence            124667788888765432      568999998766 5555556


No 214
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.3e-35  Score=271.02  Aligned_cols=200  Identities=14%  Similarity=0.082  Sum_probs=155.6

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHH---HHHhcCCCCcceEE-------E
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAE---ILSMLDHPFLPTLY-------A  167 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~---~l~~l~h~~iv~~~-------~  167 (317)
                      .++|++.+.||+|+||.||+|.+.. +++.||||++..... .....+.+.+|++   +++.++||||++++       +
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQE-TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-C-CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CceEEEcceeecCCCEEEEEEEECC-CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            5789999999999999999998876 789999999975422 3345577889995   45556799999988       7


Q ss_pred             EEEecC-----------------EEEEEEcccCCCChhcccccCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCCee
Q 042913          168 HLEVSH-----------------YICFLIDYCPNGDLHSLLPKQP-----NNRFSLQAVRFFAAEVLVGLEYLHALGIIY  225 (317)
Q Consensus       168 ~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH  225 (317)
                      ++...+                 ..|+||||+ +|+|.+++....     ...+++..++.|+.||+.||.|||++||+|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            766553                 289999999 789999997531     112334788889999999999999999999


Q ss_pred             ccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCccccccc------ccceeccchhhh
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQEN------VMEFVAEPRREQ  299 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~------~~~~~~~~~~~~  299 (317)
                      |||||+|||++.++.+||+|||+|+..+...             ....+ ..|++||.....      ...........|
T Consensus       230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  295 (377)
T 3byv_A          230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD  295 (377)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEechhheecCCcc-------------cCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence            9999999999999999999999998533211             11234 678888876543      001114468899


Q ss_pred             ccCCcccccccCCCC
Q 042913          300 REHPAQYSVEQPGGV  314 (317)
Q Consensus       300 ~~~~~~~~~e~~~G~  314 (317)
                      +|++|++++|+..|.
T Consensus       296 vwSlG~il~elltg~  310 (377)
T 3byv_A          296 AWALGLVIYWIWCAD  310 (377)
T ss_dssp             HHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHCC
Confidence            999999999999993


No 215
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.1e-34  Score=257.26  Aligned_cols=199  Identities=23%  Similarity=0.320  Sum_probs=159.5

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc------HHHHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS------AKKLSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||||++......      ......+.+|+++++.++||||+++++++..
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcC-CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            45789999999999999999999887 7899999999754321      1233457899999999999999999999876


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeecc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH---IMLSDFDL  248 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~---~kl~DFG~  248 (317)
                      +. +|+||||+++++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             Cc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence            55 8999999999999999854  467999999999999999999999999999999999999987654   99999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ++.......           .....++..|++||.....  .........|+|++|++++|+..|
T Consensus       164 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~--~~~~~~~~~Di~slG~il~~l~~g  215 (322)
T 2ycf_A          164 SKILGETSL-----------MRTLCGTPTYLAPEVLVSV--GTAGYNRAVDCWSLGVILFICLSG  215 (322)
T ss_dssp             CEECCCCHH-----------HHHHHSCCTTCCHHHHHHT--TTTTCTTHHHHHHHHHHHHHHHHS
T ss_pred             ceecccccc-----------cccccCCcCccCchhhccC--CCCCCCchhhHHHHHHHHHHHHhC
Confidence            987643211           1112456678888865211  112235789999999999999998


No 216
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.9e-34  Score=256.96  Aligned_cols=207  Identities=19%  Similarity=0.206  Sum_probs=161.1

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEc----CCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLR----DCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      ..+..++|++++.||+|+||.||+|.+.    ..+++.||||++.... .......+.+|+.+++.++||||+++++++.
T Consensus        25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (327)
T 2yfx_A           25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL  103 (327)
T ss_dssp             CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence            3567789999999999999999999843    2267899999996442 4455567889999999999999999999999


Q ss_pred             ecCEEEEEEcccCCCChhcccccCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEE
Q 042913          171 VSHYICFLIDYCPNGDLHSLLPKQPN-----NRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIM  242 (317)
Q Consensus       171 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~k  242 (317)
                      .....|+||||+++++|.+++.....     ..+++..++.++.||+.||.|||+.||+||||||+|||++.   +..+|
T Consensus       104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence            99999999999999999999976432     45899999999999999999999999999999999999984   44699


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C-CC
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G-VP  315 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G-~p  315 (317)
                      |+|||+++.........        ......++..|++||....     .......|+|++|++++|+.. | .|
T Consensus       184 l~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~ellt~g~~p  245 (327)
T 2yfx_A          184 IGDFGMARDIYRASYYR--------KGGCAMLPVKWMPPEAFME-----GIFTSKTDTWSFGVLLWEIFSLGYMP  245 (327)
T ss_dssp             ECCCHHHHHHHC--------------CCGGGSCGGGCCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ECccccccccccccccc--------cCCCcCCCcceeCHhHhcC-----CCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            99999997543322110        0111123445677775532     334678999999999999986 7 44


No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=7.4e-34  Score=266.73  Aligned_cols=204  Identities=20%  Similarity=0.317  Sum_probs=162.2

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC-CCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH-PFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~  175 (317)
                      ...++|++++.||+|+||.||+|.+.. +++.||||++......    ..+.+|+++++.++| ++|+.+..++...+..
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETT-TCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECC-CCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence            346899999999999999999999876 7899999998754322    347789999999986 5666777777888999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQS  252 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~  252 (317)
                      ++||||+ +++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||||   +.++.+||+|||+|+.+
T Consensus        79 ~lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            9999999 99999999754 4579999999999999999999999999999999999999   68899999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      ..........   ........++..|++||.     ........+.|+|+++++++|+..| .|
T Consensus       157 ~~~~~~~~~~---~~~~~~~~gt~~Y~aPE~-----~~~~~~s~~sDvwSlGvil~elltG~~P  212 (483)
T 3sv0_A          157 RDTSTHQHIP---YRENKNLTGTARYASVNT-----HLGIEQSRRDDLESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             BCTTTCCBCC---CCCCCCCCSCTTTCCHHH-----HTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCccccccc---cccccccCCCccccCHHH-----hcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            5433211100   001112234445555554     4445567899999999999999998 44


No 218
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=4.1e-34  Score=251.35  Aligned_cols=204  Identities=22%  Similarity=0.268  Sum_probs=156.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCc--eEEEEEeehhhhc-HHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSA--NFALKVVDKDLLS-AKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~--~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      .+..++|++.+.||+|+||.||+|.+...++.  .||+|++...... ....+.+.+|+++++.++||||+++++++...
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   93 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence            45668999999999999999999987543333  6899998765332 25567889999999999999999999999876


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      . .++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++..
T Consensus        94 ~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           94 P-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             S-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             C-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            5 88999999999999998654 356899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      .........       .....++..|++||...     ........|+|+++++++|+.. |
T Consensus       172 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~~~g  221 (291)
T 1u46_A          172 PQNDDHYVM-------QEHRKVPFAWCAPESLK-----TRTFSHASDTWMFGVTLWEMFTYG  221 (291)
T ss_dssp             CC-CCEEEC------------CCGGGCCHHHHH-----HCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             cccccchhh-------hccCCCCceeeCchhhc-----CCCCCchhhHHHHHHHHHHHHhCC
Confidence            543322111       11123344577777653     2334678999999999999997 7


No 219
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=9.9e-34  Score=249.88  Aligned_cols=206  Identities=22%  Similarity=0.294  Sum_probs=159.7

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe-------
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV-------  171 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------  171 (317)
                      .++|++++.||+|+||.||+|.+.. +++.||+|++...   ....+.+.+|+.+++.++||||+++++++..       
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP   80 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred             cccchhhheeccCCcEEEEEEEEcC-CCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence            4689999999999999999999876 7899999999653   4556788999999999999999999998754       


Q ss_pred             ------cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEee
Q 042913          172 ------SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSD  245 (317)
Q Consensus       172 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~D  245 (317)
                            .+..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             -----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             hcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence                  46789999999999999999754 35678899999999999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCCeeec----ccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          246 FDLCFQSDVVPTLVET----NVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       246 FG~a~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ||+++...........    ..+.........++..|++||.....    .......|+|++|++++|+..+
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~p  227 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT----GHYNEKIDMYSLGIIFFEMIYP  227 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSC----SCCCTHHHHHHHHHHHHHHHSC
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCC----CCCcchhhHHHHHHHHHHHHhc
Confidence            9999876533211100    00111112233455667777765421    1345789999999999998764


No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=1.1e-34  Score=264.14  Aligned_cols=198  Identities=18%  Similarity=0.192  Sum_probs=145.4

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhc--CCCCcceEE-------EE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL-SAKKLSHVQMEAEILSML--DHPFLPTLY-------AH  168 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~h~~iv~~~-------~~  168 (317)
                      ..+|++.+.||+|+||.||+|.+.. +++.||||++..... .....+.+.+|+.+++.+  +||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVE-RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECC-CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            3569999999999999999999887 789999999987644 335566778886555555  699988765       45


Q ss_pred             EEec-----------------CEEEEEEcccCCCChhcccccCCCCCCCHHHH------HHHHHHHHHHHHHHHHcCCee
Q 042913          169 LEVS-----------------HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAV------RFFAAEVLVGLEYLHALGIIY  225 (317)
Q Consensus       169 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~------~~i~~qi~~al~~LH~~~ivH  225 (317)
                      +...                 ..+|+||||++ ++|.+++... ...+.+..+      +.++.||+.||.|||++||+|
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivH  217 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH  217 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCcc
Confidence            4433                 34899999997 8999999753 123444445      677799999999999999999


Q ss_pred             ccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQ  305 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~  305 (317)
                      |||||+|||++.++.+||+|||+|+..+....             ...++..|++||......   .......|+|++|+
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~~---~~~~~~~DiwSlG~  281 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNAST---ATFTHALNAWQLGL  281 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTCSE---EECCHHHHHHHHHH
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccCCC---CCcCccccHHHHHH
Confidence            99999999999999999999999986542110             112335677777663211   34468899999999


Q ss_pred             cccccCCC-CC
Q 042913          306 YSVEQPGG-VP  315 (317)
Q Consensus       306 ~~~e~~~G-~p  315 (317)
                      +++|+..| .|
T Consensus       282 il~elltg~~P  292 (371)
T 3q60_A          282 SIYRVWCLFLP  292 (371)
T ss_dssp             HHHHHHHSSCS
T ss_pred             HHHHHHhCCCC
Confidence            99999998 44


No 221
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6e-34  Score=255.43  Aligned_cols=200  Identities=20%  Similarity=0.230  Sum_probs=155.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEec--
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEVS--  172 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~--  172 (317)
                      ...++|++++.||+|+||.||+|.+.   ++.||||++....     .....+|.+++..  ++||||+++++++...  
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC---CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            34579999999999999999999875   6899999986542     1334445566554  4899999999999877  


Q ss_pred             --CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CCeeccCCCCcEEEccCCcEE
Q 042913          173 --HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL--------GIIYRDLKPENILLREDGHIM  242 (317)
Q Consensus       173 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------~ivHrDikp~Nill~~~~~~k  242 (317)
                        ..+|+||||+++++|.+++..   ..+++..++.++.||+.||.|||+.        ||+||||||+|||++.++.+|
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence              789999999999999999965   4699999999999999999999998        999999999999999999999


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCccccccccccee-ccchhhhccCCcccccccCCC
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFV-AEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |+|||+|+...........      ......++..|++||.......... ....+.|+|++|++++|+..|
T Consensus       183 l~Dfg~a~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDI------PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             ECCCTTCEECC---------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCCceeeccccccccC------CCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence            9999999776543322111      0112245666777776654322211 112348999999999999988


No 222
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.5e-34  Score=263.55  Aligned_cols=203  Identities=18%  Similarity=0.196  Sum_probs=152.5

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCC--CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE-ecCEEE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCT--SANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE-VSHYIC  176 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~  176 (317)
                      ..|++.+.||+|+||.||+|.+....  +..||+|.+.... .....+.+.+|+.+++.++||||+++++++. .++..+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence            46889999999999999999876423  2468999886532 3355678999999999999999999999865 456789


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~  256 (317)
                      +||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus       168 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence            999999999999999654 4568899999999999999999999999999999999999999999999999998654322


Q ss_pred             CeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CCC
Q 042913          257 TLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GVP  315 (317)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~p  315 (317)
                      ....      .......++..|++||...     ......+.|+|+++++++|+.. |.|
T Consensus       247 ~~~~------~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwSlG~il~ellt~~~~  295 (373)
T 3c1x_A          247 FDSV------HNKTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRGAP  295 (373)
T ss_dssp             -----------------CCGGGSCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccc------cccCCCCCcccccChHHhc-----CCCCCcHHHHHHHHHHHHHHHhCcCC
Confidence            1100      0011112334466666543     3345678999999999999988 543


No 223
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=6.9e-34  Score=257.17  Aligned_cols=193  Identities=19%  Similarity=0.268  Sum_probs=161.4

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE----
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY----  174 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----  174 (317)
                      .++|.+.+.||+|+||.||+|.+.. +++.||||++..........+.+.+|+.+++.++||||+++++++.....    
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECC-CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            4789999999999999999999877 79999999998765566667889999999999999999999999976643    


Q ss_pred             --EEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          175 --ICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       175 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                        +|+||||+. ++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             eeEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence              599999995 78888873    34899999999999999999999999999999999999999999999999999765


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      +...             ....++..|++||.....    .......|+|++|++++|+..|.
T Consensus       177 ~~~~-------------~~~~~t~~y~aPE~~~~~----~~~~~~~Di~slG~il~el~~g~  221 (353)
T 3coi_A          177 DAEM-------------TGYVVTRWYRAPEVILSW----MHYNQTVDIWSVGCIMAEMLTGK  221 (353)
T ss_dssp             --------------------CCSBCCSCHHHHSCC----SCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CCCc-------------cccccCcCcCCHHHHhCc----CCCCchhhHHHHHHHHHHHHhCC
Confidence            4321             112345667888765431    23457899999999999999983


No 224
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.5e-33  Score=254.23  Aligned_cols=200  Identities=19%  Similarity=0.235  Sum_probs=164.5

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC------cceEE
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF------LPTLY  166 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~  166 (317)
                      ..+.+..++|++++.||+|+||.||+|.+....+..||+|++...   ....+.+.+|+++++.++|++      ++.++
T Consensus        12 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             ccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            456677899999999999999999999987734479999999753   344567788999999887655      89999


Q ss_pred             EEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE-----------
Q 042913          167 AHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL-----------  235 (317)
Q Consensus       167 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill-----------  235 (317)
                      +++...+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+           
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccc
Confidence            9999999999999999 7888888776655679999999999999999999999999999999999999           


Q ss_pred             --------ccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccc
Q 042913          236 --------REDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYS  307 (317)
Q Consensus       236 --------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (317)
                              +.++.+||+|||+|+.......             ...++..|++||...     ........|+|++++++
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~il  229 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHEHHT-------------TIVATRHYRPPEVIL-----ELGWAQPCDVWSIGCIL  229 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTSCCC-------------SSCSCGGGCCHHHHT-----TCCCCTHHHHHHHHHHH
T ss_pred             cccccccccCCCcEEEeecCcccccccccc-------------CCcCCCcccCCeeee-----cCCCCCccchHHHHHHH
Confidence                    5678999999999976433211             123445566666553     33446789999999999


Q ss_pred             cccCCCC
Q 042913          308 VEQPGGV  314 (317)
Q Consensus       308 ~e~~~G~  314 (317)
                      +|+..|.
T Consensus       230 ~el~~g~  236 (355)
T 2eu9_A          230 FEYYRGF  236 (355)
T ss_dssp             HHHHHSS
T ss_pred             HHHHhCC
Confidence            9999994


No 225
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=7.9e-34  Score=252.61  Aligned_cols=204  Identities=19%  Similarity=0.251  Sum_probs=151.9

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++++.||+|+||.||+|.+.. +++.||||++..........+.+..+..+++.++||||+++++++...+..
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~   99 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRK-TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV   99 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETT-TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEec-CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence            4556899999999999999999999887 789999999987654444445556666678889999999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      |+||||+ ++.+..+.... ...+++..++.++.||+.||.|||+. ||+|+||||+|||++.++.+||+|||++.....
T Consensus       100 ~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          100 FIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             EEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            9999999 66665555432 46789999999999999999999995 999999999999999999999999999976543


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ....           ....++..|++||................|+|+++++++|+..|
T Consensus       178 ~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (318)
T 2dyl_A          178 DKAK-----------DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG  225 (318)
T ss_dssp             --------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred             Cccc-----------cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence            2211           12246677888888754333334456789999999999999988


No 226
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.2e-33  Score=248.76  Aligned_cols=201  Identities=19%  Similarity=0.291  Sum_probs=155.0

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEE-EEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAH-LEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~~~~  176 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++....    ....+.+|+++++.++|++++..+.. +......+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIA-AGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETT-TTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcC-CCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence            34789999999999999999999876 78999999875442    22457889999999998776655554 46788899


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~~  253 (317)
                      +||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        82 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           82 MVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            999999 99999998743 3569999999999999999999999999999999999999   788999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .........   ........++..|++||..     .......+.|+|+++++++|+..|
T Consensus       160 ~~~~~~~~~---~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g  211 (296)
T 4hgt_A          160 DARTHQHIP---YRENKNLTGTARYASINTH-----LGIEQSRRDDLESLGYVLMYFNLG  211 (296)
T ss_dssp             CTTTCCBCC---CCCSCCCCSCGGGCCHHHH-----TTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CcccCccCC---CCcccccCCCccccchHHh-----cCCCCCchhHHHHHHHHHHHHhcC
Confidence            433211100   0011122344455555544     444457889999999999999988


No 227
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.5e-33  Score=252.93  Aligned_cols=207  Identities=21%  Similarity=0.238  Sum_probs=155.6

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHH--HHhcCCCCcceEEEEEEe
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEI--LSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~~iv~~~~~~~~  171 (317)
                      ...+..++|++++.||+|+||.||+|...   ++.||||++....     ...+..|.++  +..++|+||+++++.+..
T Consensus         7 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~   78 (336)
T 3g2f_A            7 EPSLDLDNLKLLELIGRGRYGAVYKGSLD---ERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDER   78 (336)
T ss_dssp             --CCCTTSEEEEEEEEECSSEEEEEEEET---TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             CCCcChHHhheeeecccCCCeEEEEEEEC---CeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccc
Confidence            34577899999999999999999999763   6899999997542     1233334444  455899999999986542


Q ss_pred             -----cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CCeeccCCCCcEEEcc
Q 042913          172 -----SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL---------GIIYRDLKPENILLRE  237 (317)
Q Consensus       172 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---------~ivHrDikp~Nill~~  237 (317)
                           ...+++||||+++|+|.+++...   ..++..++.++.||+.||.|||+.         ||+||||||+|||++.
T Consensus        79 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~  155 (336)
T 3g2f_A           79 VTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN  155 (336)
T ss_dssp             ECTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred             cccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence                 33679999999999999999653   458899999999999999999999         9999999999999999


Q ss_pred             CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccce--eccchhhhccCCcccccccCCC
Q 042913          238 DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEF--VAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       238 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~--~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ++.+||+|||+|+.............  ........++..|++||.........  .....+.|+|++|++++|+..|
T Consensus       156 ~~~~kL~DFG~a~~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  231 (336)
T 3g2f_A          156 DGTCVISDFGLSMRLTGNRLVRPGEE--DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR  231 (336)
T ss_dssp             TSCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcEEEeeccceeecccccccCcccc--ccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc
Confidence            99999999999987654332111000  01111234566677777665432221  3345688999999999999988


No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.1e-33  Score=251.60  Aligned_cols=206  Identities=20%  Similarity=0.242  Sum_probs=164.5

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--CCCcceEEEEEEe
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--HPFLPTLYAHLEV  171 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~  171 (317)
                      ...+..++|++++.||+|+||.||+|.+.  +++.||+|++..........+.+.+|+++++.++  |+||+++++++..
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           22 SMSVKGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             eeeeccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            34566688999999999999999999875  4889999999876656677788999999999997  5999999999999


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeeccccc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      .+.+|+|||+ .+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.
T Consensus       100 ~~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~  175 (313)
T 3cek_A          100 DQYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  175 (313)
T ss_dssp             SSEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             CCEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecccccc
Confidence            9999999995 489999999764  5789999999999999999999999999999999999996 48999999999987


Q ss_pred             CCCCCCeeecccccccccccccccCCCCCccccccccc------ceeccchhhhccCCcccccccCCC
Q 042913          252 SDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM------EFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ........        ......++..|++||.......      .........|+|+++++++|+..|
T Consensus       176 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  235 (313)
T 3cek_A          176 MQPDTTSV--------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG  235 (313)
T ss_dssp             ----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccCccccc--------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhC
Confidence            65432211        1112245667888887643211      112446789999999999999988


No 229
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=9.9e-34  Score=249.34  Aligned_cols=201  Identities=18%  Similarity=0.246  Sum_probs=161.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  176 (317)
                      ....+|.....||+|+||.||+|.+.. +++.||+|++...  .....+.+.+|+.+++.++||||+++++++...+..+
T Consensus        19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           19 YEYDENGDRVVLGKGTYGIVYAGRDLS-NQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK   95 (295)
T ss_dssp             ECBCTTSSBCEEEECSSSEEEEEEETT-TCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccCCCCcEEEeecCcEEEEEEEECC-CCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence            444555556689999999999999877 7899999999765  2344567889999999999999999999999999999


Q ss_pred             EEEcccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeecccccCCC
Q 042913          177 FLIDYCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-DGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-~~~~kl~DFG~a~~~~~  254 (317)
                      +||||+++++|.+++.... ...+++..++.++.||+.||.|||+.||+|+||||+|||++. ++.+||+|||+++....
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A           96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred             EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence            9999999999999997642 235678999999999999999999999999999999999987 89999999999987644


Q ss_pred             CCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          255 VPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .....          ....++..|++||......   .....+.|+|+++++++|+..|
T Consensus       176 ~~~~~----------~~~~~~~~y~aPE~~~~~~---~~~~~~~Di~slG~il~~l~~g  221 (295)
T 2clq_A          176 INPCT----------ETFTGTLQYMAPEIIDKGP---RGYGKAADIWSLGCTIIEMATG  221 (295)
T ss_dssp             ---------------CCCCCCGGGCCHHHHHHGG---GGCSHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcc----------cccCCCccccChhhhcCCC---CCCCcHHHHHHHHHHHHHHHHC
Confidence            22111          1123455677777654321   1245789999999999999998


No 230
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.2e-33  Score=246.38  Aligned_cols=171  Identities=20%  Similarity=0.296  Sum_probs=148.8

Q ss_pred             ccCCeEEe-eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHH-HhcCCCCcceEEEEEEe----
Q 042913           98 HLRHLKLV-RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEIL-SMLDHPFLPTLYAHLEV----  171 (317)
Q Consensus        98 ~~~~y~i~-~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~----  171 (317)
                      ..++|.+. +.||+|+||.||+|.+.. +++.||+|++...       ..+.+|+.++ +.++||||+++++++..    
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~   86 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG   86 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcC-CCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence            34667777 789999999999999877 7899999999653       3466788887 66689999999999887    


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDL  248 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~  248 (317)
                      ...+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            778999999999999999998766667999999999999999999999999999999999999997   78999999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      |.....                                     .......|+|++|++++|+..|
T Consensus       167 a~~~~~-------------------------------------~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          167 AKETTG-------------------------------------EKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             CEECTT-------------------------------------CGGGGHHHHHHHHHHHHHHHHS
T ss_pred             cccccc-------------------------------------ccCCchhhHHHHHHHHHHHHHC
Confidence            865431                                     1124678999999999999988


No 231
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=3.2e-34  Score=250.69  Aligned_cols=194  Identities=22%  Similarity=0.306  Sum_probs=155.1

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec-C
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS-H  173 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~  173 (317)
                      ..+..++|++.+.||+|+||.||+|.+.   ++.||+|++....    ..+.+.+|+++++.++||||+++++++... +
T Consensus        16 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           16 WALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   88 (278)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET---TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             ccCChhhceEEeEEecCCCceEEEEEEc---CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC
Confidence            3567789999999999999999999765   6899999997542    346788999999999999999999987544 5


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ..++||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            78999999999999999976433347899999999999999999999999999999999999999999999999987544


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ....             ...++..|++||....     .......|+|+++++++|+.. |
T Consensus       169 ~~~~-------------~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~t~g  211 (278)
T 1byg_A          169 STQD-------------TGKLPVKWTAPEALRE-----KKFSTKSDVWSFGILLWEIYSFG  211 (278)
T ss_dssp             --------------------CCTTTSCHHHHHH-----CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cccc-------------CCCccccccCHHHhCC-----CCCCchhcHHHHHHHHHHHHhCC
Confidence            3211             1123445777776532     334678999999999999987 7


No 232
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4.9e-33  Score=245.02  Aligned_cols=201  Identities=19%  Similarity=0.284  Sum_probs=159.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEE-EEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAH-LEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~~~~  176 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||+|++.....    ...+.+|+.+++.++|++++..+.. +...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIA-AGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcC-CCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence            45789999999999999999999876 789999999865432    2357889999999998876655544 46778899


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeecccccCC
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL---REDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill---~~~~~~kl~DFG~a~~~~  253 (317)
                      +||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        82 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           82 MVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            999999 99999999643 3569999999999999999999999999999999999999   488999999999998765


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .........   ........++..|++||...     ........|+|++|++++|+..|
T Consensus       160 ~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~~g  211 (296)
T 3uzp_A          160 DARTHQHIP---YRENKNLTGTARYASINTHL-----GIEQSRRDDLESLGYVLMYFNLG  211 (296)
T ss_dssp             CTTTCCBCC---CCCSCCCCSCTTTCCHHHHT-----TCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccc---cccccccccccccCChhhhc-----CCCCCcchhhHHHHHHHHHHHhC
Confidence            443211100   01112234555666666654     33456789999999999999998


No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.4e-33  Score=256.51  Aligned_cols=197  Identities=22%  Similarity=0.263  Sum_probs=163.1

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-----------CCCc
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-----------HPFL  162 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~i  162 (317)
                      ...+..++|++.+.||+|+||.||+|.+.. +++.||||++...   ......+.+|+++++.+.           |+||
T Consensus        13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i   88 (373)
T 1q8y_A           13 GEPYKDARYILVRKLGWGHFSTVWLAKDMV-NNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI   88 (373)
T ss_dssp             TCEETTTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred             CCcccCCeEEEEEeeeecCCeEEEEEEecC-CCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchH
Confidence            345667899999999999999999999876 7899999999754   234466788999988876           8999


Q ss_pred             ceEEEEEEecC----EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEcc
Q 042913          163 PTLYAHLEVSH----YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLRE  237 (317)
Q Consensus       163 v~~~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~  237 (317)
                      +++++++...+    .+++|||++ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A           89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence            99999987654    789999999 99999999876667799999999999999999999998 9999999999999953


Q ss_pred             ------CCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccC
Q 042913          238 ------DGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQP  311 (317)
Q Consensus       238 ------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  311 (317)
                            .+.+||+|||+|+.......             ...++..|++||....     .......|+|+++++++|+.
T Consensus       168 ~~~~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~  229 (373)
T 1q8y_A          168 VDSPENLIQIKIADLGNACWYDEHYT-------------NSIQTREYRSPEVLLG-----APWGCGADIWSTACLIFELI  229 (373)
T ss_dssp             EETTTTEEEEEECCCTTCEETTBCCC-------------SCCSCGGGCCHHHHHT-----CCCCTHHHHHHHHHHHHHHH
T ss_pred             cCCCcCcceEEEcccccccccCCCCC-------------CCCCCccccCcHHHhC-----CCCCchHhHHHHHHHHHHHH
Confidence                  34899999999976643211             1134556777776543     33467899999999999999


Q ss_pred             CC
Q 042913          312 GG  313 (317)
Q Consensus       312 ~G  313 (317)
                      .|
T Consensus       230 ~g  231 (373)
T 1q8y_A          230 TG  231 (373)
T ss_dssp             HS
T ss_pred             hC
Confidence            99


No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.5e-33  Score=250.80  Aligned_cols=203  Identities=19%  Similarity=0.238  Sum_probs=149.2

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHH-HHHhcCCCCcceEEEEEEecCE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAE-ILSMLDHPFLPTLYAHLEVSHY  174 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~  174 (317)
                      .+..++|++++.||+|+||.||+|.+.. +++.||||++..... ......+..|+. +++.++||||+++++++...+.
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           18 DFTAEDLKDLGEIGRGAYGSVNKMVHKP-SGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD   95 (327)
T ss_dssp             CCCSCSEEC-CEEEECSSEEEEEEEETT-TTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE
T ss_pred             ccCHHHhhehheeccCCCEEEEEEEEcC-CCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc
Confidence            4667899999999999999999999876 789999999976532 333345555555 6777899999999999999999


Q ss_pred             EEEEEcccCCCChhccccc---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeecccc
Q 042913          175 ICFLIDYCPNGDLHSLLPK---QPNNRFSLQAVRFFAAEVLVGLEYLHAL-GIIYRDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivHrDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      .++||||++ ++|.+++..   .....+++..++.++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus        96 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           96 CWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             eEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            999999995 588777652   2246789999999999999999999998 99999999999999999999999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .......           .....++..|++||...... .........|+|++|++++|+..|
T Consensus       175 ~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~-~~~~~~~~~Di~slG~il~~l~~g  225 (327)
T 3aln_A          175 QLVDSIA-----------KTRDAGCRPYMAPERIDPSA-SRQGYDVRSDVWSLGITLYELATG  225 (327)
T ss_dssp             C------------------------------------------CCSHHHHHHHHHHHHHHHHS
T ss_pred             ecccccc-----------cccCCCCccccCceeecccc-CcCCCCchhhHHHHHHHHHHHHHC
Confidence            6543221           11124566788888763221 122345789999999999999988


No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=4.7e-33  Score=254.51  Aligned_cols=200  Identities=24%  Similarity=0.313  Sum_probs=164.7

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CC-----CcceEE
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HP-----FLPTLY  166 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----~iv~~~  166 (317)
                      ..+....++|++.+.||+|+||.||+|.+.. +++.||||++...   ......+.+|+.+++.++ |+     +|++++
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRV-EQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcC-CCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            4456667899999999999999999999877 7899999999753   344566788888888875 44     499999


Q ss_pred             EEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCeeccCCCCcEEEc--cCCcEE
Q 042913          167 AHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH--ALGIIYRDLKPENILLR--EDGHIM  242 (317)
Q Consensus       167 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH--~~~ivHrDikp~Nill~--~~~~~k  242 (317)
                      +++...+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+|
T Consensus       123 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             eeeccCCceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEE
Confidence            9999999999999999 569999998765567999999999999999999999  57999999999999995  477899


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      |+|||+|+.......             ...++..|++||....     .......|+|++|++++|+..|.|
T Consensus       202 L~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~  256 (382)
T 2vx3_A          202 IVDFGSSCQLGQRIY-------------QYIQSRFYRSPEVLLG-----MPYDLAIDMWSLGCILVEMHTGEP  256 (382)
T ss_dssp             ECCCTTCEETTCCCC-------------SSCSCGGGCCHHHHTT-----CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEeccCceecccccc-------------cccCCccccChHHHcC-----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence            999999987643211             1234445777776543     334678999999999999999943


No 236
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.5e-33  Score=250.35  Aligned_cols=191  Identities=20%  Similarity=0.317  Sum_probs=153.6

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  175 (317)
                      .+..++|++.+.||+|+||.||+|.+.   ++.||+|++...    ...+.+.+|+++++.++||||+++++++.+  ..
T Consensus         4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~   74 (307)
T 2eva_A            4 MIDYKEIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PV   74 (307)
T ss_dssp             BCCGGGEEEEEEEECCSSSEEEEEEET---TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TT
T ss_pred             cCCHhHeeeeeEeecCCCceEEEEEEC---CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--Cc
Confidence            356789999999999999999999875   588999998643    234678899999999999999999998763  47


Q ss_pred             EEEEcccCCCChhcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCeeccCCCCcEEEccCCc-EEEeeecccc
Q 042913          176 CFLIDYCPNGDLHSLLPKQPN-NRFSLQAVRFFAAEVLVGLEYLHA---LGIIYRDLKPENILLREDGH-IMLSDFDLCF  250 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~---~~ivHrDikp~Nill~~~~~-~kl~DFG~a~  250 (317)
                      ++||||+++++|.+++..... ..+++..++.++.||+.||.|||+   +||+||||||+|||++.++. +||+|||++.
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A           75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC  154 (307)
T ss_dssp             EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred             EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence            899999999999999975422 247889999999999999999999   89999999999999998886 7999999997


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      .......             ...++..|++||....     .....+.|+|+++++++|+..|
T Consensus       155 ~~~~~~~-------------~~~gt~~y~aPE~~~~-----~~~~~~~Di~slG~il~el~~g  199 (307)
T 2eva_A          155 DIQTHMT-------------NNKGSAAWMAPEVFEG-----SNYSEKCDVFSWGIILWEVITR  199 (307)
T ss_dssp             -----------------------CCTTSSCHHHHTC-----CCCCTHHHHHHHHHHHHHHHHT
T ss_pred             ccccccc-------------cCCCCCceEChhhhCC-----CCCCcHHHHHHHHHHHHHHHHC
Confidence            5532211             1235566777776543     3346789999999999999998


No 237
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.6e-33  Score=251.87  Aligned_cols=199  Identities=21%  Similarity=0.281  Sum_probs=161.8

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHh--cCCCCcceEEEEEEecC--
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSM--LDHPFLPTLYAHLEVSH--  173 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~--  173 (317)
                      ..++|++.+.||+|+||.||+|.+.   ++.||||++...     ....+.+|+++++.  ++||||+++++++....  
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             ccccEEEEeeecCCCCcEEEEEEEc---CccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            4578999999999999999999874   689999999654     23456788999888  78999999999998775  


Q ss_pred             --EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcEEE
Q 042913          174 --YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH--------ALGIIYRDLKPENILLREDGHIML  243 (317)
Q Consensus       174 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH--------~~~ivHrDikp~Nill~~~~~~kl  243 (317)
                        ..|+||||+++++|.+++..   ..+++..++.++.||+.||.|||        +.+|+||||||+|||++.++.+||
T Consensus       112 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL  188 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  188 (342)
T ss_dssp             CCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred             cceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence              89999999999999999965   45899999999999999999999        899999999999999999999999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccce-eccchhhhccCCcccccccCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEF-VAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      +|||+++...........      ......++..|++||......... .....+.|+|++|++++|+..|
T Consensus       189 ~Dfg~~~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          189 ADLGLAVRHDSATDTIDI------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             CCCTTCEEEETTTTEEEE------CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCceecccccccccc------ccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            999999766543322111      112234566788888765432221 1223678999999999999988


No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=4.8e-33  Score=250.17  Aligned_cols=194  Identities=18%  Similarity=0.219  Sum_probs=145.0

Q ss_pred             cccCCeEEee-eecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe----
Q 042913           97 LHLRHLKLVR-HLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV----  171 (317)
Q Consensus        97 ~~~~~y~i~~-~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----  171 (317)
                      ...++|++.+ .||+|+||.||+|.+.. +++.||||++....   ..   .......++.++||||+++++++..    
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~---~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~   97 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRR-TGQKCALKLLYDSP---KA---RQEVDHHWQASGGPHIVCILDVYENMHHG   97 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEESSH---HH---HHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECC-CCCEEEEEEecCcH---HH---HHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence            3457899965 69999999999999887 78999999996541   11   1222334667789999999999876    


Q ss_pred             cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeecc
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE---DGHIMLSDFDL  248 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~---~~~~kl~DFG~  248 (317)
                      ...+++||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus        98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A           98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence            556899999999999999998766667999999999999999999999999999999999999976   45699999999


Q ss_pred             cccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          249 CFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       249 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      ++.......            ....++..|++||..     .........|+|+++++++|+..|.
T Consensus       178 ~~~~~~~~~------------~~~~~t~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~~g~  226 (336)
T 3fhr_A          178 AKETTQNAL------------QTPCYTPYYVAPEVL-----GPEKYDKSCDMWSLGVIMYILLCGF  226 (336)
T ss_dssp             CEEC---------------------------------------CHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ceecccccc------------ccCCCCcCccChhhh-----CCCCCCchhhHHHHHHHHHHHHHCC
Confidence            976542211            112345567777765     3334467899999999999999983


No 239
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.4e-33  Score=254.38  Aligned_cols=199  Identities=20%  Similarity=0.257  Sum_probs=155.3

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh---------hcHHHHHHHHHHHHHHHhcCCCCcceEEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL---------LSAKKLSHVQMEAEILSMLDHPFLPTLYA  167 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~  167 (317)
                      ...++|++.+.||+|+||.||+|.+..  ++.||||++....         ......+.+.+|+++++.++||||+++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE--GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT--SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC--CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            345789999999999999999998764  8999999986432         22344578999999999999999999999


Q ss_pred             EEEe-----cCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEE
Q 042913          168 HLEV-----SHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIM  242 (317)
Q Consensus       168 ~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~k  242 (317)
                      ++..     ...+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k  174 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT  174 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEE
Confidence            9843     347899999995 7888887643 45799999999999999999999999999999999999999999999


Q ss_pred             EeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          243 LSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       243 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      |+|||+|+........           ....++..|++||....    ........|+|+++++++|+..|-
T Consensus       175 l~Dfg~~~~~~~~~~~-----------~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~l~~g~  231 (362)
T 3pg1_A          175 ICDFNLAREDTADANK-----------THYVTHRWYRAPELVMQ----FKGFTKLVDMWSAGCVMAEMFNRK  231 (362)
T ss_dssp             ECCTTC--------------------------CGGGCCHHHHTT----CTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             EEecCccccccccccc-----------ceecccceecCcHHhcC----CCCCCcHhHHHhHHHHHHHHHhCC
Confidence            9999999754332211           11234455777775532    123467899999999999999883


No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.6e-34  Score=252.76  Aligned_cols=199  Identities=19%  Similarity=0.255  Sum_probs=155.3

Q ss_pred             ccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhc----CCCCcceEEE
Q 042913           96 KLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSML----DHPFLPTLYA  167 (317)
Q Consensus        96 ~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~~iv~~~~  167 (317)
                      ....++|++.+.||+|+||.||+|.+.. +++.||+|++.......    .....+.+|+.+++.+    +|+||+++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLT-DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTT-TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEcc-CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            4556889999999999999999998776 78999999997653322    2234466799999998    8999999999


Q ss_pred             EEEecCEEEEEEcc-cCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEee
Q 042913          168 HLEVSHYICFLIDY-CPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIMLSD  245 (317)
Q Consensus       168 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl~D  245 (317)
                      ++...+..++|||+ +.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~d  183 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLID  183 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEE
Confidence            99999999999999 7899999999663  5699999999999999999999999999999999999999 889999999


Q ss_pred             ecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ||+++.......            ....++..|++||.....    .......|+|+++++++|+..|
T Consensus       184 fg~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~----~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          184 FGSGALLHDEPY------------TDFDGTRVYSPPEWISRH----QYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             CSSCEECCSSCB------------CCCCSCTTTSCHHHHHHS----CBCHHHHHHHHHHHHHHHHHHS
T ss_pred             cchhhhcccCcc------------cccCCcccccCceeeecC----CCCCccchHHHHHHHHHHHHHC
Confidence            999987654221            112356668888865422    1224578999999999999998


No 241
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6e-33  Score=269.92  Aligned_cols=203  Identities=19%  Similarity=0.249  Sum_probs=162.5

Q ss_pred             CccccCCeEEeeeecccCCeEEEEEEEcCC--CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           95 GKLHLRHLKLVRHLGTGNLGRVFLCHLRDC--TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        95 ~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+..++|++.+.||+|+||.||+|.+...  .+..||+|.+.... .....+.+.+|+.+++.++||||+++++++. +
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            345678999999999999999999988642  34679999986542 4455678899999999999999999999985 4


Q ss_pred             CEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          173 HYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      +..|+||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            5689999999999999999754 346899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-CC
Q 042913          253 DVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-GV  314 (317)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G~  314 (317)
                      ........         ....++..|++||...     ........|+|++|++++|+.. |.
T Consensus       542 ~~~~~~~~---------~~~~~t~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ellt~g~  590 (656)
T 2j0j_A          542 EDSTYYKA---------SKGKLPIKWMAPESIN-----FRRFTSASDVWMFGVCMWEILMHGV  590 (656)
T ss_dssp             CC-------------------CCGGGCCHHHHH-----HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCcceec---------cCCCCCcceeCHHHhc-----CCCCCchhhHHHHHHHHHHHHHcCC
Confidence            44322111         1112234567777553     3345678999999999999875 73


No 242
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.8e-33  Score=259.23  Aligned_cols=201  Identities=20%  Similarity=0.240  Sum_probs=146.3

Q ss_pred             cCCeEE-eeeecccCCeEEEEEEEcC-CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe--cCE
Q 042913           99 LRHLKL-VRHLGTGNLGRVFLCHLRD-CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV--SHY  174 (317)
Q Consensus        99 ~~~y~i-~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~  174 (317)
                      .+.|.+ .++||+|+||.||+|.+.. .+++.||||++......    ..+.+|+.+|+.++||||+++++++..  ...
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   94 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRK   94 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence            355776 4579999999999998763 25789999999754322    357789999999999999999999954  778


Q ss_pred             EEEEEcccCCCChhcccccC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEE
Q 042913          175 ICFLIDYCPNGDLHSLLPKQ-------PNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILL----REDGHIML  243 (317)
Q Consensus       175 ~~lv~e~~~~gsL~~~l~~~-------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill----~~~~~~kl  243 (317)
                      +|+||||+ +++|.+++...       ....+++..++.++.||+.||.|||++||+||||||+||||    +.++.+||
T Consensus        95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            99999999 56888777521       12358999999999999999999999999999999999999    67789999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +|||+|+.........       .......++..|++||.....    .......|+|++|++++|+..|.|
T Consensus       174 ~Dfg~a~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DiwSlG~il~ell~g~~  234 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPL-------ADLDPVVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEP  234 (405)
T ss_dssp             CCTTCCC-----------------------CCCTTCCHHHHTTC----CSCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EECCCceecCCCCccc-------ccCCCceecCcccCchhhcCC----CcccchhhhHHHHHHHHHHHhCCC
Confidence            9999998764322110       111122455667777765321    224678999999999999999943


No 243
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.5e-33  Score=257.36  Aligned_cols=199  Identities=21%  Similarity=0.305  Sum_probs=153.4

Q ss_pred             CCCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEec
Q 042913           93 SNGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVS  172 (317)
Q Consensus        93 ~~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  172 (317)
                      ..+.....+|++.+.||+|+||.||+|.+..  +..+|+|.+....      ....+|+++++.++||||+++++++...
T Consensus        33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~--~~~~aikk~~~~~------~~~~~E~~il~~l~h~niv~l~~~~~~~  104 (394)
T 4e7w_A           33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVE--SDEVAIKKVLQDK------RFKNRELQIMRIVKHPNVVDLKAFFYSN  104 (394)
T ss_dssp             SSCCEEEEEEEEEEEEEEETTEEEEEEEETT--TEEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred             CCCCcccceEEEeEEEeeCCCeEEEEEEECC--CCeEEEEEEecCc------chHHHHHHHHHhCCCCCcceEEEEEEec
Confidence            3455667899999999999999999999876  4458888875432      1224699999999999999999998544


Q ss_pred             C------EEEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEE
Q 042913          173 H------YICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIML  243 (317)
Q Consensus       173 ~------~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl  243 (317)
                      +      .+++||||+++ ++.+.+..  .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus       105 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL  183 (394)
T 4e7w_A          105 GDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL  183 (394)
T ss_dssp             SSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             CCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEE
Confidence            3      38899999965 44433321  1246799999999999999999999999999999999999999 7999999


Q ss_pred             eeecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCCC
Q 042913          244 SDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGVP  315 (317)
Q Consensus       244 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~p  315 (317)
                      +|||+|+.........           ...++..|++||....    ........|+|++|++++|+..|.|
T Consensus       184 ~DFG~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~ell~g~~  240 (394)
T 4e7w_A          184 IDFGSAKILIAGEPNV-----------SYICSRYYRAPELIFG----ATNYTTNIDIWSTGCVMAELMQGQP  240 (394)
T ss_dssp             CCCTTCEECCTTCCCC-----------SSCSCGGGCCHHHHTT----CSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeCCCcccccCCCCCc-----------ccccCcCccCHHHHcC----CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            9999998764332211           1133445677765432    1234678999999999999999943


No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.2e-33  Score=252.32  Aligned_cols=201  Identities=19%  Similarity=0.207  Sum_probs=163.4

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----HHHHHHHHHHHHHHhcC--CCCcceEEE
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----KKLSHVQMEAEILSMLD--HPFLPTLYA  167 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~~iv~~~~  167 (317)
                      .+....++|++.+.||+|+||.||+|.+.. +++.||||++.......    .....+.+|+.+++.++  |+||+++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETT-TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            344567899999999999999999998877 78999999997653221    12245677999999996  599999999


Q ss_pred             EEEecCEEEEEEcccCC-CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEee
Q 042913          168 HLEVSHYICFLIDYCPN-GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLR-EDGHIMLSD  245 (317)
Q Consensus       168 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~-~~~~~kl~D  245 (317)
                      ++...+..++|||++.+ ++|.+++..  ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~D  193 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  193 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEee
Confidence            99999999999999976 899999865  36789999999999999999999999999999999999999 789999999


Q ss_pred             ecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          246 FDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       246 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ||+++.......            ....++..|++||.....    .......|+|+++++++|+..|
T Consensus       194 fg~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~----~~~~~~~Di~slG~il~el~~g  245 (320)
T 3a99_A          194 FGSGALLKDTVY------------TDFDGTRVYSPPEWIRYH----RYHGRSAAVWSLGILLYDMVCG  245 (320)
T ss_dssp             CTTCEECCSSCB------------CCCCSCGGGSCHHHHHHS----CBCHHHHHHHHHHHHHHHHHHS
T ss_pred             Cccccccccccc------------cCCCCCccCCChHHhccC----CCCCccchHHhHHHHHHHHHHC
Confidence            999987653211            112345567777755321    1225778999999999999998


No 245
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.98  E-value=3.1e-34  Score=255.47  Aligned_cols=211  Identities=17%  Similarity=0.261  Sum_probs=164.3

Q ss_pred             CCccccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecC
Q 042913           94 NGKLHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSH  173 (317)
Q Consensus        94 ~~~~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  173 (317)
                      ...+..++|++.+.||+|+||.||+|.+..    .+|+|++..........+.+.+|+.+++.++|+||+++++++...+
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~----~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG----EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS----SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC----eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            345677899999999999999999998764    5999999765433344456778999999999999999999999999


Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      .+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++...
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG  180 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred             ceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence            999999999999999999654 34689999999999999999999999999999999999998 6899999999987654


Q ss_pred             CCCCeeecccccccccccccccCCCCCcccccccccc----eeccchhhhccCCcccccccCCC-CC
Q 042913          254 VVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVME----FVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~----~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      .......     ........++..|++||.......+    ........|+|++|++++|+..| .|
T Consensus       181 ~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  242 (319)
T 2y4i_B          181 VLQAGRR-----EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP  242 (319)
T ss_dssp             ------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccc-----ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence            3221110     0111223466678888876543221    12346789999999999999988 44


No 246
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.98  E-value=7.4e-33  Score=250.73  Aligned_cols=198  Identities=19%  Similarity=0.224  Sum_probs=146.0

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCE--
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHY--  174 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--  174 (317)
                      ...++|++.+.||+|+||.||+|.+.. +++.||||++....   .....+.++++.++.++||||+++++++...+.  
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKS-TGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETT-TCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECC-CCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            456899999999999999999999877 78999999986542   222345677888899999999999999865433  


Q ss_pred             -----EEEEEcccCCCChhccccc--CCCCCCCHHHHHHHHHHHHHHHHHHH--HcCCeeccCCCCcEEEcc-CCcEEEe
Q 042913          175 -----ICFLIDYCPNGDLHSLLPK--QPNNRFSLQAVRFFAAEVLVGLEYLH--ALGIIYRDLKPENILLRE-DGHIMLS  244 (317)
Q Consensus       175 -----~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~al~~LH--~~~ivHrDikp~Nill~~-~~~~kl~  244 (317)
                           +++||||+++ +|.+.+..  .....+++..++.++.||+.||.|||  +.||+||||||+|||++. ++.+||+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence                 8999999954 55544332  23467899999999999999999999  999999999999999996 8999999


Q ss_pred             eecccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCCC
Q 042913          245 DFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGGV  314 (317)
Q Consensus       245 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~  314 (317)
                      |||+|+........           ....++..|++||.....    .......|+|++|++++|+..|.
T Consensus       175 Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~----~~~~~~~Di~slG~il~ell~g~  229 (360)
T 3e3p_A          175 DFGSAKKLSPSEPN-----------VAYICSRYYRAPELIFGN----QHYTTAVDIWSVGCIFAEMMLGE  229 (360)
T ss_dssp             CCTTCBCCCTTSCC-----------CSTTSCGGGCCHHHHTTC----SSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eCCCceecCCCCCc-----------ccccCCcceeCHHHHcCC----CCCCcHHHHHHHHHHHHHHHhCC
Confidence            99999876543221           111344557777765321    22467899999999999999993


No 247
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=1.1e-32  Score=263.70  Aligned_cols=185  Identities=15%  Similarity=0.065  Sum_probs=128.2

Q ss_pred             eecccCCeEEEEEEEcCCCCceEEEEEeehhh--------hcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEEE
Q 042913          107 HLGTGNLGRVFLCHLRDCTSANFALKVVDKDL--------LSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus       107 ~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..+.|++|.+..++..- .|+.|++|++.+..        ..+...+++.+|+++|+++ .|+||+++++++++++.+||
T Consensus       241 ~~~~~~~~~h~~~rr~~-fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYF-FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             C-C--------CCEEEE-ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             ccccCCccccccccccc-ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            45667777666554333 57899999997642        1234556799999999999 59999999999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                      ||||++|++|.++|.+  .+++++.   .|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.......
T Consensus       320 VMEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EEECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred             EEecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence            9999999999999965  3667664   4789999999999999999999999999999999999999999987765443


Q ss_pred             eeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC
Q 042913          258 LVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG  313 (317)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G  313 (317)
                      ...+.          .++.+|++||...+.      .....|+|++++...+++.|
T Consensus       395 ~~~t~----------vGTp~YmAPE~l~g~------~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          395 WPTNL----------VQSFFVFVNELFAEN------KSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             CSHHH----------HHHHHHHHHHHC-----------------------CCCCTT
T ss_pred             cccCc----------eechhhccHHHhCCC------CCCcccccccccchhhhccc
Confidence            32222          345567777766543      23457889999988888776


No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97  E-value=4.9e-33  Score=267.79  Aligned_cols=200  Identities=23%  Similarity=0.272  Sum_probs=162.4

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEEe------
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLEV------  171 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------  171 (317)
                      ..++|++.+.||+|+||.||+|.+.. +++.||||++.... .....+.+.+|+++++.++||||+++++++..      
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~-tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQD-TGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTT-TTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECC-CCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            34789999999999999999998776 78999999987642 45666789999999999999999999998755      


Q ss_pred             cCEEEEEEcccCCCChhcccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeec
Q 042913          172 SHYICFLIDYCPNGDLHSLLPKQP-NNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGH---IMLSDFD  247 (317)
Q Consensus       172 ~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~---~kl~DFG  247 (317)
                      .+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.   +||+|||
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            677899999999999999997642 236899999999999999999999999999999999999997664   9999999


Q ss_pred             ccccCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCCC-CC
Q 042913          248 LCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPGG-VP  315 (317)
Q Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G-~p  315 (317)
                      +++........           ....++..|++||...     ........|+|++|++++|+..| .|
T Consensus       170 ~a~~~~~~~~~-----------~~~~gt~~Y~APE~l~-----~~~~s~ksDIwSLGviLyeLltG~~P  222 (676)
T 3qa8_A          170 YAKELDQGELC-----------TEFVGTLQYLAPELLE-----QKKYTVTVDYWSFGTLAFECITGFRP  222 (676)
T ss_dssp             CCCBTTSCCCC-----------CCCCSCCTTCSSCSSC-----CSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred             ccccccccccc-----------ccccCCcccCChHHhc-----cCCCCchhHHHHHHHHHHHHHHCCCC
Confidence            99876443211           1123455667776553     34456789999999999999999 44


No 249
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97  E-value=3.1e-32  Score=253.11  Aligned_cols=204  Identities=23%  Similarity=0.261  Sum_probs=151.3

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEEE
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  176 (317)
                      ..+.|.+.+.||+|+||+||.+...  +++.||||++....     .+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~~~~--~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   85 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY   85 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEEEES--SSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             hhheeeccCeEeeCCCeEEEEEEEE--CCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE
Confidence            3456777899999999999876444  58999999987542     24567899999876 8999999999999999999


Q ss_pred             EEEcccCCCChhcccccCCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-------------
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNR-----FSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRED-------------  238 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~-------------  238 (317)
                      +||||+ +|+|.+++.......     ..+..++.++.||+.||.|||++||+||||||+|||++.+             
T Consensus        86 lv~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~  164 (434)
T 2rio_A           86 IALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN  164 (434)
T ss_dssp             EEECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred             EEEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCc
Confidence            999999 579999997542211     1233457799999999999999999999999999999754             


Q ss_pred             CcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCccccccccc--ceeccchhhhccCCcccccccCC-C-C
Q 042913          239 GHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVM--EFVAEPRREQREHPAQYSVEQPG-G-V  314 (317)
Q Consensus       239 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~-G-~  314 (317)
                      +.+||+|||+|+..........+      ......++.+|++||.......  .........|+|++|++++|+.. | .
T Consensus       165 ~~~kL~DFG~a~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~  238 (434)
T 2rio_A          165 LRILISDFGLCKKLDSGQSSFRT------NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH  238 (434)
T ss_dssp             CEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCC
T ss_pred             eEEEEcccccceecCCCCcccee------eecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCC
Confidence            48999999999877654321111      1112356778888887754221  12345688999999999999987 6 4


Q ss_pred             C
Q 042913          315 P  315 (317)
Q Consensus       315 p  315 (317)
                      |
T Consensus       239 P  239 (434)
T 2rio_A          239 P  239 (434)
T ss_dssp             T
T ss_pred             C
Confidence            4


No 250
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97  E-value=5.3e-32  Score=251.27  Aligned_cols=199  Identities=20%  Similarity=0.234  Sum_probs=150.0

Q ss_pred             cccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhc-CCCCcceEEEEEEecCEE
Q 042913           97 LHLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSML-DHPFLPTLYAHLEVSHYI  175 (317)
Q Consensus        97 ~~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  175 (317)
                      +...+|.+.+.||+|+||+||.....  +++.||||++.....     ..+.+|+++|+.+ +||||+++++++......
T Consensus        21 i~~~~y~~~~~LG~G~~G~V~~~~~~--~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~   93 (432)
T 3p23_A           21 VGKISFCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ   93 (432)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEEES--SSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred             EccEEEecCCeeecCcCEEEEEEEEe--CCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence            34457999999999999997654333  589999999865432     2356799999999 799999999999999999


Q ss_pred             EEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-----CCcEEEeeecccc
Q 042913          176 CFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE-----DGHIMLSDFDLCF  250 (317)
Q Consensus       176 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~-----~~~~kl~DFG~a~  250 (317)
                      |+||||+ +++|.+++.... ..+.+..++.++.||+.||.|||++||+||||||+|||++.     ...+||+|||+|+
T Consensus        94 ~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A           94 YIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             EEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             EEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence            9999999 579999987643 34555567789999999999999999999999999999953     2368899999998


Q ss_pred             cCCCCCCeeecccccccccccccccCCCCCcccccccccceeccchhhhccCCcccccccCC-C
Q 042913          251 QSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENVMEFVAEPRREQREHPAQYSVEQPG-G  313 (317)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-G  313 (317)
                      ..........       ......++.+|++||......  ........|+|++|++++|+.. |
T Consensus       172 ~~~~~~~~~~-------~~~~~~gt~~y~APE~l~~~~--~~~~t~~~DiwSlG~il~ellt~g  226 (432)
T 3p23_A          172 KLAVGRHSFS-------RRSGVPGTEGWIAPEMLSEDC--KENPTYTVDIFSAGCVFYYVISEG  226 (432)
T ss_dssp             CC-------------------CCSCTTSCCGGGTSCC-----CCCTHHHHHHHHHHHHHHHTTS
T ss_pred             eccCCCccee-------eccccCCCcCccChhhhhccc--ccCCCcHHHHHHHHHHHHHHHcCC
Confidence            7654321111       111234667788888764321  1223468999999999999998 6


No 251
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97  E-value=2.4e-31  Score=245.66  Aligned_cols=202  Identities=15%  Similarity=0.107  Sum_probs=149.5

Q ss_pred             ccCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhh-hcHHHHHHHHHHHHHHHhcCC-CCc-------------
Q 042913           98 HLRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDL-LSAKKLSHVQMEAEILSMLDH-PFL-------------  162 (317)
Q Consensus        98 ~~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~~i-------------  162 (317)
                      ..+.|++.+.||+|+||.||+|.+.. +++.||||++.... ......+.+.+|+.+++.++| .|.             
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~-~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQE-TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred             CceeEEEecccccCCCEEEEEEEecC-CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence            34568999999999999999999887 78999999987332 222446778899999999876 211             


Q ss_pred             --------ceEEEEEEe-----cCEEEEEEcccCCCChhcccc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCe
Q 042913          163 --------PTLYAHLEV-----SHYICFLIDYCPNGDLHSLLP-----KQPNNRFSLQAVRFFAAEVLVGLEYLHALGII  224 (317)
Q Consensus       163 --------v~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~~~~~~~~~i~~qi~~al~~LH~~~iv  224 (317)
                              ..++.++..     ...++++|+++ +++|.+++.     ......+++..++.++.||+.||.|||++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii  233 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  233 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                    111111111     22467888877 899999884     22345578889999999999999999999999


Q ss_pred             eccCCCCcEEEccCCcEEEeeecccccCCCCCCeeecccccccccccccccCCCCCcccccccc-----cceeccchhhh
Q 042913          225 YRDLKPENILLREDGHIMLSDFDLCFQSDVVPTLVETNVGSATRRRRRKSCNGFGSAKRRQENV-----MEFVAEPRREQ  299 (317)
Q Consensus       225 HrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-----~~~~~~~~~~~  299 (317)
                      ||||||+||||+.++.+||+|||+|+.....             .....+ ..|++||......     ........+.|
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D  299 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD  299 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEE-------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCc-------------cccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence            9999999999999999999999998764432             111234 6788888764221     13334567899


Q ss_pred             ccCCcccccccCCC-CC
Q 042913          300 REHPAQYSVEQPGG-VP  315 (317)
Q Consensus       300 ~~~~~~~~~e~~~G-~p  315 (317)
                      +|+++++++|+.+| .|
T Consensus       300 vwSlGvil~elltg~~P  316 (413)
T 3dzo_A          300 TWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             HHHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999998 54


No 252
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.94  E-value=1.5e-26  Score=202.75  Aligned_cols=136  Identities=16%  Similarity=0.150  Sum_probs=108.8

Q ss_pred             CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcH----------------HHHHHHHHHHHHHHhcCCCCcce
Q 042913          101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSA----------------KKLSHVQMEAEILSMLDHPFLPT  164 (317)
Q Consensus       101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~~iv~  164 (317)
                      .|.+.+.||+|+||.||+|.+ . +++.||+|+++......                .....+.+|+.+++.++|   ++
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~-~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~  165 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-E-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LA  165 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-T-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SS
T ss_pred             EEEecCEeccCCCceEEEEEe-C-CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CC
Confidence            455669999999999999998 4 78999999996432111                235678899999999984   44


Q ss_pred             EEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEe
Q 042913          165 LYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLS  244 (317)
Q Consensus       165 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~  244 (317)
                      +++++.. +..|+||||++|++|.+ +..        .....++.||+.||.|||+.||+||||||+|||++ ++.+||+
T Consensus       166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~  234 (282)
T 1zar_A          166 VPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII  234 (282)
T ss_dssp             SCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred             cCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence            4444433 45699999999999999 522        12456899999999999999999999999999999 9999999


Q ss_pred             eecccccC
Q 042913          245 DFDLCFQS  252 (317)
Q Consensus       245 DFG~a~~~  252 (317)
                      |||+|+..
T Consensus       235 DFG~a~~~  242 (282)
T 1zar_A          235 DFPQSVEV  242 (282)
T ss_dssp             CCTTCEET
T ss_pred             ECCCCeEC
Confidence            99999743


No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=4.7e-26  Score=216.62  Aligned_cols=136  Identities=16%  Similarity=0.128  Sum_probs=107.1

Q ss_pred             EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh------cHHHHHHHHHHHHHHHhcCCCCcceEEEEEEecCEEEE
Q 042913          104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL------SAKKLSHVQMEAEILSMLDHPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  177 (317)
                      ..+.||+|+||.||+|...   ++.+++|.......      .....+++.+|+++++.++||||+++..++...+..|+
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYL---DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             --------CCEEEEEEECS---SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCEEeeCCCEEEEEEEEC---CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            3567999999999999433   67889998644321      12234668999999999999999955444456667799


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      ||||+++++|.+++..          ++.++.||+.||.|||++||+||||||+|||++.  .+||+|||+|+....
T Consensus       417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            9999999999999954          5688999999999999999999999999999998  999999999988754


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.90  E-value=3.8e-24  Score=185.04  Aligned_cols=142  Identities=15%  Similarity=0.137  Sum_probs=109.5

Q ss_pred             CeEEeeeecccCCeEEEEEEEcCCCCce--EEEEEeehhhhc----------------------HHHHHHHHHHHHHHHh
Q 042913          101 HLKLVRHLGTGNLGRVFLCHLRDCTSAN--FALKVVDKDLLS----------------------AKKLSHVQMEAEILSM  156 (317)
Q Consensus       101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~E~~~l~~  156 (317)
                      -|.+.+.||+|+||.||+|.+.. +|+.  ||||+++.....                      ......+.+|+.+|+.
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~-~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVF-DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcC-CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            37899999999999999998844 5788  999997543111                      1122367889999999


Q ss_pred             cCCCC--cceEEEEEEecCEEEEEEcccCC-C----ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCCeeccC
Q 042913          157 LDHPF--LPTLYAHLEVSHYICFLIDYCPN-G----DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLH-ALGIIYRDL  228 (317)
Q Consensus       157 l~h~~--iv~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivHrDi  228 (317)
                      +.|++  ++.+++.    +..++||||+.+ |    .|.++...     .++..+..++.||+.+|.||| +.||+||||
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDl  197 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADL  197 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSC
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            98875  4555543    245899999932 3    56655422     234567889999999999999 999999999


Q ss_pred             CCCcEEEccCCcEEEeeecccccCCC
Q 042913          229 KPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       229 kp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      ||+|||++.  .++|+|||+|...+.
T Consensus       198 kp~NILl~~--~~~liDFG~a~~~~~  221 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVTLRH  221 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEETTS
T ss_pred             CHHHEEEcC--cEEEEECcccccCCC
Confidence            999999988  999999999987643


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.85  E-value=4.9e-21  Score=172.84  Aligned_cols=139  Identities=15%  Similarity=0.156  Sum_probs=104.2

Q ss_pred             eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhc---------------H-H--H--HHHHHHHHHHHHhcCCCC
Q 042913          102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLS---------------A-K--K--LSHVQMEAEILSMLDHPF  161 (317)
Q Consensus       102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~---------------~-~--~--~~~~~~E~~~l~~l~h~~  161 (317)
                      |.+++.||+|+||.||+|.+.  +|+.||||+++.....               . .  .  .-...+|...|.++.+.+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            899999999999999999875  4899999987532110               0 0  0  111345777888886554


Q ss_pred             c--ceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 042913          162 L--PTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLREDG  239 (317)
Q Consensus       162 i--v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~~~  239 (317)
                      +  ...++.  ..  .+|||||++|++|.++...        .....++.||+.+|.+||+.|||||||||.|||++++|
T Consensus       175 v~vp~p~~~--~~--~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          175 FPVPEPIAQ--SR--HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             CSCCCEEEE--ET--TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             CCCCeeeec--cC--ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            4  344433  22  3799999999888776532        12456789999999999999999999999999998876


Q ss_pred             ----------cEEEeeecccccCCC
Q 042913          240 ----------HIMLSDFDLCFQSDV  254 (317)
Q Consensus       240 ----------~~kl~DFG~a~~~~~  254 (317)
                                .+.|+||+-+...+.
T Consensus       243 d~~d~~~~~~~~~iID~~Q~V~~~h  267 (397)
T 4gyi_A          243 DAEDPSSITLTPIIIXFPQMVSMDH  267 (397)
T ss_dssp             CSSCTTSEEEEEEECCCTTCEETTS
T ss_pred             CcccccccccceEEEEeCCcccCCC
Confidence                      389999998866544


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.60  E-value=3.6e-15  Score=128.58  Aligned_cols=143  Identities=14%  Similarity=0.118  Sum_probs=113.3

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEE
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICF  177 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l  177 (317)
                      ...|++...++.|+.+.||++...   ++.+++|+......  .....+.+|+++++.+. +..++++++++...+..|+
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~~---~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVGE---NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEECS---SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             hccceeEeeccCCCCCeEEEEECC---CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            356889999999999999998633   57899999875321  11235788999999985 6778899999999999999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-------------------------------------  220 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-------------------------------------  220 (317)
                      ||||++|.+|.+.+..       ......++.++..+|..||+                                     
T Consensus        88 v~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           88 LMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            9999999999876421       11234678899999999998                                     


Q ss_pred             ----------------------cCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          221 ----------------------LGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       221 ----------------------~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                                            ..++|+|++|.|||++.++.+.|+||+.|...+
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd  215 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRAD  215 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccCC
Confidence                                  448999999999999876566799999886543


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.49  E-value=1.2e-13  Score=118.52  Aligned_cols=137  Identities=16%  Similarity=0.056  Sum_probs=100.9

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC--cceEEEEEEecCEEEE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF--LPTLYAHLEVSHYICF  177 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~~~~l  177 (317)
                      ..|.+....+.|..+.||++...  +|..+++|+....     ....+.+|+.+++.+.+.+  +++++++....+..++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~--~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~   92 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQ--GRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL   92 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECT--TSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred             CCCceEecccCCCCceEEEEecC--CCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence            34555544446667999998643  4678999997643     1245678999998886444  6679998888888999


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-----------------------------------
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-----------------------------------  222 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-----------------------------------  222 (317)
                      ||||++|.+|.  ...     ..   ...++.+++..|..||...                                   
T Consensus        93 v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           93 LLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             EEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             EEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            99999998884  311     11   1245677777888888643                                   


Q ss_pred             -----------------------CeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          223 -----------------------IIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       223 -----------------------ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                                             ++|+|++|.|||++.++.+.|+|||.|...+
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~  216 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD  216 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCC
Confidence                                   9999999999999876667799999986544


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.44  E-value=6.6e-13  Score=119.76  Aligned_cols=143  Identities=13%  Similarity=0.187  Sum_probs=107.9

Q ss_pred             EeeeecccCCeEEEEEEEcCCCCceEEEEEee--hhhhcHHHHHHHHHHHHHHHhcC--CCCcceEEEEEEec---CEEE
Q 042913          104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVD--KDLLSAKKLSHVQMEAEILSMLD--HPFLPTLYAHLEVS---HYIC  176 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~---~~~~  176 (317)
                      .++.|+.|.++.||++...   +..+++|+..  .... ......+.+|..+++.+.  +..+++++.++.+.   +..|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~---~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP---GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS---SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             eEEEcCCcccceEEEEEEC---CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            4677899999999998654   4678899876  3321 122356788999999997  45688999988766   4589


Q ss_pred             EEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 042913          177 FLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA------------------------------------  220 (317)
Q Consensus       177 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~------------------------------------  220 (317)
                      +||||++|..+.+..    -..++......++.+++..|..||.                                    
T Consensus       118 ~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             EEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             EEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            999999988875532    1336788888999999999999997                                    


Q ss_pred             ----------------------cCCeeccCCCCcEEEccCCc--EEEeeecccccCCC
Q 042913          221 ----------------------LGIIYRDLKPENILLREDGH--IMLSDFDLCFQSDV  254 (317)
Q Consensus       221 ----------------------~~ivHrDikp~Nill~~~~~--~kl~DFG~a~~~~~  254 (317)
                                            ..++|+|++|.|||++.++.  +.|+||+.|...+.
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p  251 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHP  251 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCH
Confidence                                  35899999999999997653  69999999876543


No 259
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=99.16  E-value=2.8e-10  Score=100.87  Aligned_cols=138  Identities=18%  Similarity=0.273  Sum_probs=102.5

Q ss_pred             eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC----CCcceEEEEEEecCEEEE
Q 042913          102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH----PFLPTLYAHLEVSHYICF  177 (317)
Q Consensus       102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~~iv~~~~~~~~~~~~~l  177 (317)
                      +.-++.++.|....||++      +..+++|+....    .....+.+|.++++.+.+    ..+++++++    +..|+
T Consensus        39 i~~v~~l~~G~~n~vy~v------g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l  104 (320)
T 3r70_A           39 INELRYLSSGDDSDTFLC------NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN  104 (320)
T ss_dssp             CSCEEEEEECSSEEEEEE------TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred             eEEEEeCCCCCCceEEEE------CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence            345677899999999997      467889987433    223458889999998875    235666665    45689


Q ss_pred             EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-----------------------------------
Q 042913          178 LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-----------------------------------  222 (317)
Q Consensus       178 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-----------------------------------  222 (317)
                      ||||++|.+|.+...    ..++......++.+++..|..||+..                                   
T Consensus       105 vme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (320)
T 3r70_A          105 IMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL  180 (320)
T ss_dssp             EEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence            999999988864321    23566677778888888888888432                                   


Q ss_pred             ----------------------------CeeccCCCCcEEEccCCcEEEeeecccccCCCCCC
Q 042913          223 ----------------------------IIYRDLKPENILLREDGHIMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       223 ----------------------------ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~~~  257 (317)
                                                  ++|+|++|.|||++.++.+.|+||+.|...+....
T Consensus       181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~D  243 (320)
T 3r70_A          181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDND  243 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGG
T ss_pred             ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHH
Confidence                                        39999999999999866679999999976554333


No 260
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.08  E-value=4.3e-10  Score=98.88  Aligned_cols=135  Identities=20%  Similarity=0.157  Sum_probs=100.4

Q ss_pred             eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CC--CcceEEEEEEecC---EEEEEE
Q 042913          106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HP--FLPTLYAHLEVSH---YICFLI  179 (317)
Q Consensus       106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~--~iv~~~~~~~~~~---~~~lv~  179 (317)
                      +.++.|....||++      +..+++|+....    .....+.+|.++|+.+. +.  .+++++.......   ..|+||
T Consensus        26 ~~~~~G~~n~v~~v------~~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           26 EISGEGNDCIAYEI------NRDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CEEEECSSEEEEES------TTSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             EecCCCCcceEEEE------CCEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            45899999999986      256899986532    34567889999998884 33  2556665544333   348899


Q ss_pred             cccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 042913          180 DYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA---------------------------------------  220 (317)
Q Consensus       180 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~---------------------------------------  220 (317)
                      ++++|.+|.+...    ..++......++.|++..|..||.                                       
T Consensus        96 ~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           96 TKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             ECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             cccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            9999988875432    236777778888888888888886                                       


Q ss_pred             -------------------cCCeeccCCCCcEEEcc--CCcEEEeeecccccCCC
Q 042913          221 -------------------LGIIYRDLKPENILLRE--DGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       221 -------------------~~ivHrDikp~Nill~~--~~~~kl~DFG~a~~~~~  254 (317)
                                         ..++|+|++|.||+++.  .+.+.|+||+.+...+.
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~  226 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP  226 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh
Confidence                               13699999999999998  45688999999876554


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=99.00  E-value=6.8e-09  Score=91.35  Aligned_cols=139  Identities=17%  Similarity=0.095  Sum_probs=97.6

Q ss_pred             eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC---CcceEEEEEE-ecCEEEEEEc
Q 042913          105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP---FLPTLYAHLE-VSHYICFLID  180 (317)
Q Consensus       105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e  180 (317)
                      ++.++.|....||+.      +..+++|+...    ......+.+|.++|+.+.+.   .|++++.+.. ..+..|+|||
T Consensus        24 v~~l~~G~~n~v~~v------g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           24 VESLGEGFRNYAILV------NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             EEEEEECSSEEEEEE------TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeecCCCcceeEEEE------CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence            345788888899987      46788998532    23456789999999999742   3667777764 4556789999


Q ss_pred             ccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------------------------------------
Q 042913          181 YCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL---------------------------------------  221 (317)
Q Consensus       181 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---------------------------------------  221 (317)
                      |++|..|.+..-    ..++......++.++...|..||..                                       
T Consensus        94 ~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           94 KVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             CCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             ccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            999988876321    1234445555555555555555532                                       


Q ss_pred             ---------------------CCeeccCCCCcEEEcc---CCc-EEEeeecccccCCCCCC
Q 042913          222 ---------------------GIIYRDLKPENILLRE---DGH-IMLSDFDLCFQSDVVPT  257 (317)
Q Consensus       222 ---------------------~ivHrDikp~Nill~~---~~~-~kl~DFG~a~~~~~~~~  257 (317)
                                           .++|+|++|.|||++.   ++. +.|+||+.+...++...
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~D  230 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYD  230 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGG
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHH
Confidence                                 3599999999999987   455 58999999876655443


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.99  E-value=5.8e-09  Score=89.83  Aligned_cols=135  Identities=18%  Similarity=0.147  Sum_probs=96.4

Q ss_pred             ecccCCe-EEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEEEEEcccCCC
Q 042913          108 LGTGNLG-RVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYICFLIDYCPNG  185 (317)
Q Consensus       108 lg~G~~g-~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g  185 (317)
                      +..|..+ .||+..... .+..+++|+....     ....+.+|..+|+.+. +--|.+++.++.+.+..|+|||+++|.
T Consensus        32 ~~~G~S~~~v~rl~~~~-~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKP-NAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EECSSSSCEEEEEECCT-TCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             ccCCCcCCeEEEEEecC-CCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            4445555 689876554 5678999987543     3456788999998885 344778999999999999999999988


Q ss_pred             ChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------------------------------------------
Q 042913          186 DLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHAL--------------------------------------------  221 (317)
Q Consensus       186 sL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--------------------------------------------  221 (317)
                      ++.+.....      ......+..++...|..||..                                            
T Consensus       106 ~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          106 TAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             EHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             cccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            877654321      112233445555555555531                                            


Q ss_pred             --------------CCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          222 --------------GIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       222 --------------~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                                    .++|+|+.+.|||++.++.+-|+||+.|...+.
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp  226 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADR  226 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEET
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCH
Confidence                          168999999999999877778999999876544


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.87  E-value=1.2e-08  Score=91.83  Aligned_cols=77  Identities=13%  Similarity=0.153  Sum_probs=58.6

Q ss_pred             eEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEEEEec-CEEEEE
Q 042913          102 LKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAHLEVS-HYICFL  178 (317)
Q Consensus       102 y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~~~~~-~~~~lv  178 (317)
                      ..-++.|+.|....+|+...   .++.+++|+....       ..+..|..+++.+...  .+++++.+.... +..|+|
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~---~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv  112 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV---GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI  112 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE---TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred             CceEEECCCCCcceEEEEEE---CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence            34567789999999999864   3688999987543       2477889999988743  356788776654 678999


Q ss_pred             EcccCCCChh
Q 042913          179 IDYCPNGDLH  188 (317)
Q Consensus       179 ~e~~~~gsL~  188 (317)
                      |||++|.+|.
T Consensus       113 ~e~l~G~~l~  122 (362)
T 3ovc_A          113 SRRAQGVTLQ  122 (362)
T ss_dssp             EECCCSEETT
T ss_pred             EEecCCCCcc
Confidence            9999887664


No 264
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.77  E-value=4.2e-08  Score=85.48  Aligned_cols=77  Identities=13%  Similarity=0.098  Sum_probs=58.8

Q ss_pred             EEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC---CcceEEEEEEecCEEEEEE
Q 042913          103 KLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP---FLPTLYAHLEVSHYICFLI  179 (317)
Q Consensus       103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~lv~  179 (317)
                      .-.+.|+.|.++.||++...  +|+.+++|+.....  ......+..|.+.|+.+.+.   .+++++++.    ..|+||
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~--dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm   89 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELA--DGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM   89 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEET--TSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred             cceeeeCCcchhheEEEEeC--CCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence            45678999999999999765  47899999965431  11224578899999999764   578888763    258999


Q ss_pred             cccCCCCh
Q 042913          180 DYCPNGDL  187 (317)
Q Consensus       180 e~~~~gsL  187 (317)
                      ||++++.+
T Consensus        90 e~l~g~~~   97 (288)
T 3d1u_A           90 EWVDERPP   97 (288)
T ss_dssp             ECCCCCCC
T ss_pred             EecccCCC
Confidence            99998875


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.62  E-value=1e-06  Score=78.11  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=79.8

Q ss_pred             eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--CCCcceEEE------EEEecCEEE
Q 042913          105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--HPFLPTLYA------HLEVSHYIC  176 (317)
Q Consensus       105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~------~~~~~~~~~  176 (317)
                      ++.|+.|..+.||++....   ..+++|+....   .   ..+..|..+++.|.  .-.+++++.      +....+..+
T Consensus        37 ~~~l~gG~~n~~~~v~~~~---~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~  107 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDS---GAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF  107 (346)
T ss_dssp             EEECC----CEEEEEEETT---EEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred             eeeccccccCcEEEEEeCC---CCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence            3456667789999987543   45899998752   2   22334555555442  113333332      123467789


Q ss_pred             EEEcccCCCChhc-----------c---cc----cC--CCC------CCCHHH---------------------------
Q 042913          177 FLIDYCPNGDLHS-----------L---LP----KQ--PNN------RFSLQA---------------------------  203 (317)
Q Consensus       177 lv~e~~~~gsL~~-----------~---l~----~~--~~~------~~~~~~---------------------------  203 (317)
                      +||+|++|..+..           .   ++    ..  +..      ...+..                           
T Consensus       108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  187 (346)
T 2q83_A          108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL  187 (346)
T ss_dssp             EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred             EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence            9999998865430           0   00    00  000      011111                           


Q ss_pred             ----HHHHHHHHHHHHHHHHH-------------cCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          204 ----VRFFAAEVLVGLEYLHA-------------LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       204 ----~~~i~~qi~~al~~LH~-------------~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                          +..+..++..++.+|++             ..++|+|+++.|||++.++.+.|+||+.|.....
T Consensus       188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~  255 (346)
T 2q83_A          188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLP  255 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccCCh
Confidence                01111223445666652             5799999999999998888999999999865443


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.61  E-value=2.6e-07  Score=82.78  Aligned_cols=87  Identities=13%  Similarity=0.101  Sum_probs=57.7

Q ss_pred             EEeeee-cccCCeEEEEEEEc---CC--CCceEEEEEeehhhh-cHHHHHHHHHHHHHHHhcC-C--CCcceEEEEEEec
Q 042913          103 KLVRHL-GTGNLGRVFLCHLR---DC--TSANFALKVVDKDLL-SAKKLSHVQMEAEILSMLD-H--PFLPTLYAHLEVS  172 (317)
Q Consensus       103 ~i~~~l-g~G~~g~Vy~~~~~---~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~~iv~~~~~~~~~  172 (317)
                      ...+.| +.|....+|+....   ..  .++.+++|+...... .......+.+|..+++.+. +  ..+++++.+..+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            445678 88889999988654   00  146789998754320 0000134677888888775 2  3577888877654


Q ss_pred             ---CEEEEEEcccCCCChhc
Q 042913          173 ---HYICFLIDYCPNGDLHS  189 (317)
Q Consensus       173 ---~~~~lv~e~~~~gsL~~  189 (317)
                         +..|+||||++|..+.+
T Consensus       103 ~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCCB
T ss_pred             CccCCceEEEEecCCCChhh
Confidence               35689999998877765


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.56  E-value=2e-07  Score=84.87  Aligned_cols=79  Identities=13%  Similarity=0.188  Sum_probs=50.4

Q ss_pred             EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhh--cH---HHHHHHHHHHHHHHhcCC---CCcceEEEEEEecCEE
Q 042913          104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLL--SA---KKLSHVQMEAEILSMLDH---PFLPTLYAHLEVSHYI  175 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~--~~---~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~  175 (317)
                      -.+.||.|.++.||++.... .++.+++|.......  ..   ....++..|.++++.+..   ..+++++.+  +....
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~-~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQE-HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC-----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             EEEECCCCceEEEEEEEECC-CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCcc
Confidence            45679999999999997554 467899998653211  01   122456778888887742   345567754  33446


Q ss_pred             EEEEcccCCC
Q 042913          176 CFLIDYCPNG  185 (317)
Q Consensus       176 ~lv~e~~~~g  185 (317)
                      ++|||++++.
T Consensus       111 ~lvmE~l~g~  120 (397)
T 2olc_A          111 VTVMEDLSHL  120 (397)
T ss_dssp             EEEECCCTTS
T ss_pred             EEEEEeCCCc
Confidence            8999999763


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.22  E-value=3.9e-05  Score=67.38  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             EEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC---CCCcceEEEEEEecCEEEEEE
Q 042913          103 KLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD---HPFLPTLYAHLEVSHYICFLI  179 (317)
Q Consensus       103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~  179 (317)
                      .-.+.|+.|....+|+...   .+..+++|+....     ....+..|...|+.|.   ...+++++.+....+..|+||
T Consensus        39 ~~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm  110 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND---EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL  110 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES---SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred             eeeEEeCCccceeeeEEEE---CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence            3457789999999999864   2578889987643     2456788888888874   356889999888888999999


Q ss_pred             cccCCCCh
Q 042913          180 DYCPNGDL  187 (317)
Q Consensus       180 e~~~~gsL  187 (317)
                      ||+++..+
T Consensus       111 e~l~G~~~  118 (312)
T 3jr1_A          111 EALNKSKN  118 (312)
T ss_dssp             ECCCCCCC
T ss_pred             EeccCCCC
Confidence            99988765


No 269
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=98.14  E-value=9.8e-06  Score=71.27  Aligned_cols=145  Identities=19%  Similarity=0.213  Sum_probs=81.6

Q ss_pred             CeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCC--CcceEEEE------EEec
Q 042913          101 HLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHP--FLPTLYAH------LEVS  172 (317)
Q Consensus       101 ~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~------~~~~  172 (317)
                      ...-++.|+.|....+|++...+   ..+++|+.....    ....+..|..+++.|...  .+++++..      ....
T Consensus        23 ~~~~~~~i~~G~~n~~~~v~~~~---g~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~   95 (322)
T 2ppq_A           23 SLTSYKGIAEGVENSNFLLHTTK---DPLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELS   95 (322)
T ss_dssp             CEEEEEEECC---EEEEEEEESS---CCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEET
T ss_pred             cceEeeccCCCcccceEEEEeCC---ccEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEEC
Confidence            34456778888889999987653   378899886521    123455677777766421  13333321      1234


Q ss_pred             CEEEEEEcccCCCChhcc--------------cc----cCCCC---CCC---HHHHHH------------HHHHHHHHHH
Q 042913          173 HYICFLIDYCPNGDLHSL--------------LP----KQPNN---RFS---LQAVRF------------FAAEVLVGLE  216 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~--------------l~----~~~~~---~~~---~~~~~~------------i~~qi~~al~  216 (317)
                      +..+++|+|++|..+...              ++    .....   ...   +.....            +...+...+.
T Consensus        96 g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~  175 (322)
T 2ppq_A           96 GRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEID  175 (322)
T ss_dssp             TEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            678999999988654321              00    00000   011   111000            0011344455


Q ss_pred             HHHH-------cCCeeccCCCCcEEEccCCcEEEeeecccccC
Q 042913          217 YLHA-------LGIIYRDLKPENILLREDGHIMLSDFDLCFQS  252 (317)
Q Consensus       217 ~LH~-------~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~  252 (317)
                      ++..       .+++|+|+.+.|||++.++.+.|+||+.|...
T Consensus       176 ~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g  218 (322)
T 2ppq_A          176 YLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACND  218 (322)
T ss_dssp             HHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccCc
Confidence            5553       36999999999999987766689999987543


No 270
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=98.11  E-value=6.6e-06  Score=75.39  Aligned_cols=33  Identities=21%  Similarity=0.383  Sum_probs=28.5

Q ss_pred             HcCCeeccCCCCcEEEccCCcEEEeeecccccCC
Q 042913          220 ALGIIYRDLKPENILLREDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       220 ~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~  253 (317)
                      ...++|+|++|.|||++.++ ++|+||+.|...+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            45699999999999998776 9999999987654


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=98.05  E-value=2.4e-05  Score=68.19  Aligned_cols=137  Identities=15%  Similarity=0.090  Sum_probs=76.6

Q ss_pred             eeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecCEEEEEEccc-
Q 042913          105 VRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSHYICFLIDYC-  182 (317)
Q Consensus       105 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~-  182 (317)
                      ++.|+.|....+|++       +.+++|+.....  .. .....+|..+++.+....+ ++++...  ...-++++||+ 
T Consensus        23 i~~l~gG~tN~~~~~-------~~~vlR~~~~~~--~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-------GDLCLRIPGKGT--EE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE-------TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred             eeEcCCcccccccee-------eeEEEECCCCCc--cc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence            677888999999998       458899876431  11 1123457777777652222 5676543  32347899999 


Q ss_pred             CCCChhcc--------c----------ccCCC---CCCC-HHHHHHHHH--------------HHHHHHHHHH----H--
Q 042913          183 PNGDLHSL--------L----------PKQPN---NRFS-LQAVRFFAA--------------EVLVGLEYLH----A--  220 (317)
Q Consensus       183 ~~gsL~~~--------l----------~~~~~---~~~~-~~~~~~i~~--------------qi~~al~~LH----~--  220 (317)
                      +|.+|...        +          +....   ..+. ...+..+..              .+...+..|.    .  
T Consensus        91 ~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~  170 (301)
T 3dxq_A           91 GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHP  170 (301)
T ss_dssp             TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence            66555320        0          00000   0011 111111111              1111122221    1  


Q ss_pred             --cCCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          221 --LGIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       221 --~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                        ..++|+|+.+.||+ ..++.+.|+||..|...+.
T Consensus       171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~  205 (301)
T 3dxq_A          171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGMNDP  205 (301)
T ss_dssp             CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEECT
T ss_pred             CCceeeccCCCcCCEE-ECCCCEEEEecccccCCCH
Confidence              13899999999999 5667889999999876544


No 272
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.02  E-value=1.6e-05  Score=68.89  Aligned_cols=80  Identities=15%  Similarity=0.146  Sum_probs=56.7

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC---CCcceEEEEEEecCEEE
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH---PFLPTLYAHLEVSHYIC  176 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~  176 (317)
                      .+..-++.+|.|..+.||+....+  |+.|++|+......  .....+..|...|+.|..   --+++++.+.  .  -+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~D--G~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~   86 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELAD--GTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RT   86 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETT--SCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECC--CCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ce
Confidence            455677889999999999998774  88999998754321  112346789999988852   2456777643  2  37


Q ss_pred             EEEcccCCCCh
Q 042913          177 FLIDYCPNGDL  187 (317)
Q Consensus       177 lv~e~~~~gsL  187 (317)
                      +||||++++..
T Consensus        87 lv~e~l~~~~~   97 (288)
T 3f7w_A           87 LAMEWVDERPP   97 (288)
T ss_dssp             EEEECCCCCCC
T ss_pred             EEEEeecccCC
Confidence            89999976643


No 273
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.96  E-value=1.5e-05  Score=70.61  Aligned_cols=142  Identities=13%  Similarity=0.088  Sum_probs=74.5

Q ss_pred             eeecccCCeE-EEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC--CCCcceEEEEEEecCEEEEEEccc
Q 042913          106 RHLGTGNLGR-VFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD--HPFLPTLYAHLEVSHYICFLIDYC  182 (317)
Q Consensus       106 ~~lg~G~~g~-Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~  182 (317)
                      +.|+.|.... +|+....  +++.+++|......     ...+..|+.+++.+.  .-.+++++.+....+  +++||++
T Consensus        24 ~~l~gg~s~~~~~r~~~~--~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l   94 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSP--TGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL   94 (333)
T ss_dssp             CC--------CCEEEECT--TCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred             eECCCCCCCceEEEEEcC--CCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence            3465554444 6676532  25678888764421     023445677776664  234667777644444  6899999


Q ss_pred             CCCChhcccccC---------------------C---CCCCCHHHHH-------HHH-------------HHHHHHHHHH
Q 042913          183 PNGDLHSLLPKQ---------------------P---NNRFSLQAVR-------FFA-------------AEVLVGLEYL  218 (317)
Q Consensus       183 ~~gsL~~~l~~~---------------------~---~~~~~~~~~~-------~i~-------------~qi~~al~~L  218 (317)
                      .+..+.+.+...                     .   -..+......       .+.             ..+...+..|
T Consensus        95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l  174 (333)
T 3csv_A           95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI  174 (333)
T ss_dssp             CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence            666654332110                     0   0112221110       000             0111222333


Q ss_pred             H------HcCCeeccCCCCcEEEccC----CcEEEeeecccccCCCCC
Q 042913          219 H------ALGIIYRDLKPENILLRED----GHIMLSDFDLCFQSDVVP  256 (317)
Q Consensus       219 H------~~~ivHrDikp~Nill~~~----~~~kl~DFG~a~~~~~~~  256 (317)
                      -      ...++|+|+.+.|||++.+    +.+.|+||+.|...+..-
T Consensus       175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~~  222 (333)
T 3csv_A          175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAY  222 (333)
T ss_dssp             HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTTH
T ss_pred             HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCHH
Confidence            1      2369999999999999874    689999999987655443


No 274
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.95  E-value=3.9e-05  Score=70.49  Aligned_cols=76  Identities=25%  Similarity=0.387  Sum_probs=50.2

Q ss_pred             EeeeecccCCeEEEEEEEcCC------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEE
Q 042913          104 LVRHLGTGNLGRVFLCHLRDC------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYIC  176 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~  176 (317)
                      -++.|+.|....||++.....      .++.+++|+..... .   ...+.+|..+++.|...+ .+++++.+.+    .
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g  148 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G  148 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence            356688888899999976521      24789999884321 1   123446888888875333 4677776542    3


Q ss_pred             EEEcccCCCCh
Q 042913          177 FLIDYCPNGDL  187 (317)
Q Consensus       177 lv~e~~~~gsL  187 (317)
                      +|+||++|.+|
T Consensus       149 ~v~e~l~G~~l  159 (429)
T 1nw1_A          149 RLEEYIPSRPL  159 (429)
T ss_dssp             EEECCCCEEEC
T ss_pred             EEEEEeCCccc
Confidence            89999987554


No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.88  E-value=0.00011  Score=64.73  Aligned_cols=142  Identities=17%  Similarity=0.145  Sum_probs=80.0

Q ss_pred             eeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCC--CCcceEEEE-----EEecCEEEEE
Q 042913          106 RHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDH--PFLPTLYAH-----LEVSHYICFL  178 (317)
Q Consensus       106 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~-----~~~~~~~~lv  178 (317)
                      ..|+ |....||++...  .|+.+++|+........   ..+..|..+++.+..  -.+++++..     ....+..+++
T Consensus        32 ~~l~-g~~n~~y~v~~~--~g~~~vlK~~~~~~~~~---~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l  105 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE--DRRRFVVKFYRPERWTA---DQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV  105 (328)
T ss_dssp             EEEC-CSSSEEEEECCT--TCCCEEEEEECTTTSCH---HHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred             Eeec-CcccceEEEEcC--CCCEEEEEEcCCCCCCH---HHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence            3466 888899987544  36689999986432222   345567777776642  123444332     2235677899


Q ss_pred             EcccCCCChhcc----c--------------ccCC---CCCCCHHHH----------------------HHHHHHHHHHH
Q 042913          179 IDYCPNGDLHSL----L--------------PKQP---NNRFSLQAV----------------------RFFAAEVLVGL  215 (317)
Q Consensus       179 ~e~~~~gsL~~~----l--------------~~~~---~~~~~~~~~----------------------~~i~~qi~~al  215 (317)
                      |+|++|..+...    +              ....   ...+.....                      ...+.+++..+
T Consensus       106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l  185 (328)
T 1zyl_A          106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV  185 (328)
T ss_dssp             EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence            999987554310    0              0000   011111110                      01111222222


Q ss_pred             HHH----HHcCCeeccCCCCcEEEccCCcEEEeeecccccCCCC
Q 042913          216 EYL----HALGIIYRDLKPENILLREDGHIMLSDFDLCFQSDVV  255 (317)
Q Consensus       216 ~~L----H~~~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~~  255 (317)
                      .-+    ....++|+|+++.|||++ + .+.|+||+.|......
T Consensus       186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g~~~  227 (328)
T 1zyl_A          186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNGPAV  227 (328)
T ss_dssp             HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEECTT
T ss_pred             HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcCcHH
Confidence            221    123488999999999998 4 8999999988665443


No 276
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.86  E-value=7.5e-05  Score=67.31  Aligned_cols=146  Identities=20%  Similarity=0.320  Sum_probs=85.8

Q ss_pred             CCeEEeeeecccCCeEEEEEEEcC------CCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEec
Q 042913          100 RHLKLVRHLGTGNLGRVFLCHLRD------CTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVS  172 (317)
Q Consensus       100 ~~y~i~~~lg~G~~g~Vy~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~  172 (317)
                      +.+.+ +.|..|-...+|++....      ..++.+++|+.....   .....+.+|.++++.|. +.-.+++++.+.+ 
T Consensus        51 ~~l~v-~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-  125 (379)
T 3feg_A           51 EELRV-YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE-  125 (379)
T ss_dssp             GGCCC-EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT-
T ss_pred             CceEE-EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC-
Confidence            44443 456668888999987642      124789999863321   12345568888888875 3334677776653 


Q ss_pred             CEEEEEEcccCCCChhcc-cc----------------cC--C-CCCC--CHHHHHHHHHHHHH-----------------
Q 042913          173 HYICFLIDYCPNGDLHSL-LP----------------KQ--P-NNRF--SLQAVRFFAAEVLV-----------------  213 (317)
Q Consensus       173 ~~~~lv~e~~~~gsL~~~-l~----------------~~--~-~~~~--~~~~~~~i~~qi~~-----------------  213 (317)
                         .+||||++|.+|..- +.                ..  + .+..  -+..+.++..++..                 
T Consensus       126 ---g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  202 (379)
T 3feg_A          126 ---GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL  202 (379)
T ss_dssp             ---EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred             ---ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence               289999988665421 10                00  0 1111  23455555544322                 


Q ss_pred             --HHHHHHH--------cCCeeccCCCCcEEEccC----CcEEEeeecccccCC
Q 042913          214 --GLEYLHA--------LGIIYRDLKPENILLRED----GHIMLSDFDLCFQSD  253 (317)
Q Consensus       214 --al~~LH~--------~~ivHrDikp~Nill~~~----~~~kl~DFG~a~~~~  253 (317)
                        .+..|.+        ..++|+|+.+.|||++.+    +.+.|+||..|...+
T Consensus       203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~  256 (379)
T 3feg_A          203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNY  256 (379)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEE
T ss_pred             HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCC
Confidence              2333332        248999999999999876    789999999986543


No 277
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.71  E-value=0.0002  Score=63.57  Aligned_cols=33  Identities=18%  Similarity=0.289  Sum_probs=29.1

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeeecccccCCC
Q 042913          222 GIIYRDLKPENILLREDGHIMLSDFDLCFQSDV  254 (317)
Q Consensus       222 ~ivHrDikp~Nill~~~~~~kl~DFG~a~~~~~  254 (317)
                      .++|+|+.+.||+++.++.+.|+||+.+...+.
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~  239 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPK  239 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEEECT
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCH
Confidence            599999999999999888999999998866554


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.70  E-value=0.00025  Score=65.59  Aligned_cols=77  Identities=9%  Similarity=0.146  Sum_probs=49.3

Q ss_pred             EeeeecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCCc-ceEEEEEEecCEEEEEEccc
Q 042913          104 LVRHLGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPFL-PTLYAHLEVSHYICFLIDYC  182 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~  182 (317)
                      -++.|+.|-...+|++.... .+..+++|+.....  .. .-...+|..+++.|...++ +++++.+.  +  .+||||+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g~~~--~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I  183 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMS-KQAKYLIRLYGPKT--DE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFM  183 (458)
T ss_dssp             EEEEECC--CEEEEEEEETT-TTEEEEEEEECC-C--CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECC-CCceEEEEECCCCh--hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEee
Confidence            34578888889999997653 34788999874321  11 1112578999998874444 67887763  2  3599999


Q ss_pred             CCCChh
Q 042913          183 PNGDLH  188 (317)
Q Consensus       183 ~~gsL~  188 (317)
                      +|.+|.
T Consensus       184 ~G~~l~  189 (458)
T 2qg7_A          184 DGYALS  189 (458)
T ss_dssp             CSEECC
T ss_pred             CCccCC
Confidence            876553


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.67  E-value=0.00024  Score=63.63  Aligned_cols=76  Identities=14%  Similarity=0.212  Sum_probs=45.2

Q ss_pred             eeeecccCCeEEEEEEEcCC-------CCceEEEEEeehhhhcHHHHHHHHHHHHHHHhcCCCC-cceEEEEEEecCEEE
Q 042913          105 VRHLGTGNLGRVFLCHLRDC-------TSANFALKVVDKDLLSAKKLSHVQMEAEILSMLDHPF-LPTLYAHLEVSHYIC  176 (317)
Q Consensus       105 ~~~lg~G~~g~Vy~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~  176 (317)
                      ++.|+.|....+|++.....       .++.+++|+......   .......|.++++.+...+ ++++++.+  .+  +
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~  110 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--G  110 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEec--CC--c
Confidence            45677888889999876430       126889998754311   1112356888888775333 55777654  22  6


Q ss_pred             EEEcccCCCCh
Q 042913          177 FLIDYCPNGDL  187 (317)
Q Consensus       177 lv~e~~~~gsL  187 (317)
                      +||||++|..+
T Consensus       111 ~v~e~i~G~~l  121 (369)
T 3c5i_A          111 RIEEWLYGDPL  121 (369)
T ss_dssp             EEEECCCSEEC
T ss_pred             EEEEEecCCcC
Confidence            89999987654


No 280
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.53  E-value=0.0005  Score=62.27  Aligned_cols=149  Identities=23%  Similarity=0.328  Sum_probs=86.3

Q ss_pred             cCCeEEeeeecccCCeEEEEEEEcCC------CCceEEEEEeehhhhc------------HH----HHHHHHHHHHHHHh
Q 042913           99 LRHLKLVRHLGTGNLGRVFLCHLRDC------TSANFALKVVDKDLLS------------AK----KLSHVQMEAEILSM  156 (317)
Q Consensus        99 ~~~y~i~~~lg~G~~g~Vy~~~~~~~------~~~~vavK~~~~~~~~------------~~----~~~~~~~E~~~l~~  156 (317)
                      .+++.+.. |..|-...+|++.....      ..+.|++++.-.....            .+    ..+.+..|..+++.
T Consensus        52 ~~~i~v~~-l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~  130 (401)
T 3f2s_A           52 EDEFHISV-IRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAI  130 (401)
T ss_dssp             GGGCEEEE-EECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHH
T ss_pred             hhheEEEE-cCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHH
Confidence            35555554 55577889999876531      2367889987443110            00    01123358888888


Q ss_pred             cC-CCCcceEEEEEEecCEEEEEEcccCCCChhc--ccc---------------cC--C-CCCCC--HHHHHHHHHHHH-
Q 042913          157 LD-HPFLPTLYAHLEVSHYICFLIDYCPNGDLHS--LLP---------------KQ--P-NNRFS--LQAVRFFAAEVL-  212 (317)
Q Consensus       157 l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~--~l~---------------~~--~-~~~~~--~~~~~~i~~qi~-  212 (317)
                      +. +--.+++++++..+    +|+||++|.+|..  +..               ..  + .....  +..+..+..++. 
T Consensus       131 L~~~Gi~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~  206 (401)
T 3f2s_A          131 LAERSLGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLR  206 (401)
T ss_dssp             HHHTTSSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHh
Confidence            75 44466888776532    8999998766532  110               00  0 11112  223344443321 


Q ss_pred             ---------------------HHHHH----HHHc----CCeeccCCCCcEEEccC------CcEEEeeecccccC
Q 042913          213 ---------------------VGLEY----LHAL----GIIYRDLKPENILLRED------GHIMLSDFDLCFQS  252 (317)
Q Consensus       213 ---------------------~al~~----LH~~----~ivHrDikp~Nill~~~------~~~kl~DFG~a~~~  252 (317)
                                           .-+..    |...    .++|+|+.+.|||++.+      +.+.|+||..|...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~  281 (401)
T 3f2s_A          207 IKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             CCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEE
T ss_pred             ccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCcC
Confidence                                 12222    2222    48999999999999876      78999999988543


No 281
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=97.08  E-value=0.0025  Score=58.21  Aligned_cols=77  Identities=13%  Similarity=0.289  Sum_probs=49.0

Q ss_pred             EeeeecccCCeEEEEEEEcCCC------CceEEEEEeehhhhcHHHHHHHHHHHHHHHhcC-CCCcceEEEEEEecCEEE
Q 042913          104 LVRHLGTGNLGRVFLCHLRDCT------SANFALKVVDKDLLSAKKLSHVQMEAEILSMLD-HPFLPTLYAHLEVSHYIC  176 (317)
Q Consensus       104 i~~~lg~G~~g~Vy~~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~  176 (317)
                      -++.|..|-...+|++......      ++.+++|+.....   ...-...+|..+++.+. +.-.+++++.+.  +  +
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~  146 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--G  146 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence            3455667888899999765311      5789999875431   11122356888887775 333567776432  2  7


Q ss_pred             EEEcccCCCCh
Q 042913          177 FLIDYCPNGDL  187 (317)
Q Consensus       177 lv~e~~~~gsL  187 (317)
                      +|+||++|..|
T Consensus       147 ~I~efI~G~~l  157 (424)
T 3mes_A          147 RIEEFIDGEPL  157 (424)
T ss_dssp             EEEECCCSEEC
T ss_pred             EEEEEeCCccC
Confidence            89999988664


No 282
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.33  E-value=0.033  Score=50.32  Aligned_cols=31  Identities=32%  Similarity=0.411  Sum_probs=25.9

Q ss_pred             CeeccCCCCcEEE------ccCCcEEEeeecccccCC
Q 042913          223 IIYRDLKPENILL------REDGHIMLSDFDLCFQSD  253 (317)
Q Consensus       223 ivHrDikp~Nill------~~~~~~kl~DFG~a~~~~  253 (317)
                      ++|+|+.+.|||+      ++++.++|+||.+|....
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~  282 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNY  282 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCC
Confidence            6799999999999      346789999999986543


No 283
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=92.15  E-value=1.1  Score=39.12  Aligned_cols=77  Identities=14%  Similarity=0.174  Sum_probs=44.3

Q ss_pred             EEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-----CeeccCCCCcEEEccCC-cEEEeeec
Q 042913          174 YICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALG-----IIYRDLKPENILLREDG-HIMLSDFD  247 (317)
Q Consensus       174 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-----ivHrDikp~Nill~~~~-~~kl~DFG  247 (317)
                      ..+++|+|.+|..|.+.-.......+.......+.  -+-++..+..++     +-+.--.+.|||++.++ .+.++|-+
T Consensus       156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn  233 (342)
T 1cja_A          156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK  233 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred             cceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence            56799999987777665422111123333322211  123445555432     12223689999998654 59999999


Q ss_pred             ccccC
Q 042913          248 LCFQS  252 (317)
Q Consensus       248 ~a~~~  252 (317)
                      +|..-
T Consensus       234 ~af~~  238 (342)
T 1cja_A          234 IIPLD  238 (342)
T ss_dssp             CCCCC
T ss_pred             ccccC
Confidence            98543


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.71  E-value=0.59  Score=38.08  Aligned_cols=87  Identities=13%  Similarity=0.057  Sum_probs=62.6

Q ss_pred             CCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc
Q 042913          158 DHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENILLRE  237 (317)
Q Consensus       158 ~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Nill~~  237 (317)
                      .||+++.. .+-+..+.+.+.++.-+.+-=+..+     ..++....++++.+|+....++  ..-+|--|.|+||+++.
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i-----k~~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f~~  114 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI-----KSFTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFFTR  114 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG-----GGSCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEECT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH-----HhcCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEEcC
Confidence            58888877 4556667777776655433222224     3367888889998888777443  34577789999999999


Q ss_pred             CCcEEEeeecccccC
Q 042913          238 DGHIMLSDFDLCFQS  252 (317)
Q Consensus       238 ~~~~kl~DFG~a~~~  252 (317)
                      ++.+++.-.|+-...
T Consensus       115 ~~~p~i~~RGik~~l  129 (215)
T 4ann_A          115 DGLPIAKTRGLQNVV  129 (215)
T ss_dssp             TSCEEESCCEETTTB
T ss_pred             CCCEEEEEccCccCC
Confidence            999999999985444


No 285
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.81  E-value=0.016  Score=53.57  Aligned_cols=64  Identities=13%  Similarity=0.066  Sum_probs=17.3

Q ss_pred             EEeeeecccCCeEEEEEEEcCCCCceEEE------EEeehhhhcHHHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 042913          103 KLVRHLGTGNLGRVFLCHLRDCTSANFAL------KVVDKDLLSAKKLSHVQMEAEILSMLDHPFLPTLYAHLE  170 (317)
Q Consensus       103 ~i~~~lg~G~~g~Vy~~~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  170 (317)
                      .+.+.||   ||.||++.+.. ...+||+      |.........+....+.+|..+++.++|+|+++.+.+..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~-~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYK-KHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC----------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccc-cCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            3445566   99999998875 3457888      766554445555667888999999999999999887653


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=89.94  E-value=1.1  Score=36.59  Aligned_cols=86  Identities=8%  Similarity=-0.041  Sum_probs=60.3

Q ss_pred             CCCCcceEEEEEEecCEEEEEEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHH-HHHHcCCeeccCCCCcEEEc
Q 042913          158 DHPFLPTLYAHLEVSHYICFLIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLE-YLHALGIIYRDLKPENILLR  236 (317)
Q Consensus       158 ~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~-~LH~~~ivHrDikp~Nill~  236 (317)
                      .||++  -..+-..++.+.+.++.-+++.=+..+     ..++....++++.+|+.... ++  ..-+|--|.|+||+++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-----~~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~  118 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-----RKTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFN  118 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-----HTSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEEC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-----HhcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEe
Confidence            57888  333446677777777665343323333     23678888888888776555 33  4567888999999999


Q ss_pred             cCCcEEEeeecccccC
Q 042913          237 EDGHIMLSDFDLCFQS  252 (317)
Q Consensus       237 ~~~~~kl~DFG~a~~~  252 (317)
                      .++.++|.-.|+-...
T Consensus       119 ~~~~p~i~hRGi~~~l  134 (219)
T 4ano_A          119 RALEPFFLHVGVKESL  134 (219)
T ss_dssp             TTCCEEESCCEETTTB
T ss_pred             CCCcEEEEEcCCcccC
Confidence            9999999999985444


No 287
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=86.27  E-value=4.1  Score=39.24  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=23.7

Q ss_pred             ccCCCCcEEEccCCcEEEeeeccccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      +|=.++||||+.+|.+.-+|||++..
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f~  576 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYILG  576 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCTT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhhc
Confidence            68889999999999999999999853


No 288
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=82.89  E-value=8.5  Score=36.44  Aligned_cols=26  Identities=27%  Similarity=0.484  Sum_probs=23.3

Q ss_pred             ccCCCCcEEEccCCcEEEeeeccccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCFQ  251 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~~  251 (317)
                      +|=.++||||+.+|++.=+|||++..
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f~  502 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYILG  502 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCTT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhhc
Confidence            57789999999999999999999853


No 289
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=80.19  E-value=1.9  Score=35.27  Aligned_cols=60  Identities=15%  Similarity=0.050  Sum_probs=45.7

Q ss_pred             CChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEee
Q 042913          185 GDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHA-LGIIYRDLKPENILLREDGHIMLSD  245 (317)
Q Consensus       185 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivHrDikp~Nill~~~~~~kl~D  245 (317)
                      -+|.++|... +.+++++++|.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.|.+.+
T Consensus        33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            3688888765 6889999999999999999887622 1212333457899999999998874


No 290
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.15  E-value=13  Score=37.57  Aligned_cols=25  Identities=28%  Similarity=0.581  Sum_probs=22.9

Q ss_pred             ccCCCCcEEEccCCcEEEeeecccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      +|=.++||||+.+|++.-+|||.+.
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhh
Confidence            5778999999999999999999984


No 291
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=64.13  E-value=12  Score=38.10  Aligned_cols=25  Identities=24%  Similarity=0.545  Sum_probs=23.4

Q ss_pred             ccCCCCcEEEccCCcEEEeeecccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      +|=.++||||+.+|.+.-+|||++.
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            7889999999999999999999974


No 292
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=63.36  E-value=10  Score=38.02  Aligned_cols=25  Identities=28%  Similarity=0.534  Sum_probs=22.7

Q ss_pred             ccCCCCcEEEccCCcEEEeeecccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      +|=.++||||+.+|++.-+|||++.
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            6888999999999999999999975


No 293
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=60.31  E-value=11  Score=37.74  Aligned_cols=25  Identities=32%  Similarity=0.627  Sum_probs=23.1

Q ss_pred             ccCCCCcEEEccCCcEEEeeecccc
Q 042913          226 RDLKPENILLREDGHIMLSDFDLCF  250 (317)
Q Consensus       226 rDikp~Nill~~~~~~kl~DFG~a~  250 (317)
                      +|=.++||||+.+|.+.-+|||++.
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            6888999999999999999999874


No 294
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=53.82  E-value=34  Score=31.69  Aligned_cols=131  Identities=20%  Similarity=0.211  Sum_probs=84.6

Q ss_pred             ecccCCeEEEEEEEcCCCCceEEEEEeehhhhcHH--HHHHHHHHHHHHHhcCCCCcceEEEEEE---------------
Q 042913          108 LGTGNLGRVFLCHLRDCTSANFALKVVDKDLLSAK--KLSHVQMEAEILSMLDHPFLPTLYAHLE---------------  170 (317)
Q Consensus       108 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------------  170 (317)
                      +.-|--|-|-.+....  +-.++.|+|+.....++  ..+.++....+.+  +|..|=++-+..+               
T Consensus       314 ~APGikGmVM~VFTLP--Sf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eL  389 (578)
T 3eps_A          314 EAPGIRGMVMLVFTLP--GFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPAL  389 (578)
T ss_dssp             ECSSCCCSSEEEEECT--TCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred             ECCCCCceEEEEEcCC--CCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHH
Confidence            7788889998886664  78899999976533222  1223333333333  3554444433221               


Q ss_pred             --------------ecCEEEE---EEcccCCCChhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcE
Q 042913          171 --------------VSHYICF---LIDYCPNGDLHSLLPKQPNNRFSLQAVRFFAAEVLVGLEYLHALGIIYRDLKPENI  233 (317)
Q Consensus       171 --------------~~~~~~l---v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivHrDikp~Ni  233 (317)
                                    +++.+.+   .+|.- ...|.-+|..     -+.+++...+.+.-.||+.|-..+|.-+|+=-.|+
T Consensus       390 L~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~-----a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNF  463 (578)
T 3eps_A          390 MELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQ-----VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNF  463 (578)
T ss_dssp             HHHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHH-----CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             HHHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhh-----CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC
Confidence                          1222211   12221 2344444533     24567778888999999999999999999999999


Q ss_pred             EEccCCcEEEeeecc
Q 042913          234 LLREDGHIMLSDFDL  248 (317)
Q Consensus       234 ll~~~~~~kl~DFG~  248 (317)
                      =|+..|+|..-|+.=
T Consensus       464 GVTRhgRVVFYDYDE  478 (578)
T 3eps_A          464 GVTRHGRVVFYDYDE  478 (578)
T ss_dssp             EECTTCCEEECCGGG
T ss_pred             CccccceEEEecccc
Confidence            999999999999974


No 295
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=24.67  E-value=2.1  Score=39.38  Aligned_cols=28  Identities=11%  Similarity=0.046  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEEEe
Q 042913          144 LSHVQMEAEILSMLDHPFLPTLYAHLEV  171 (317)
Q Consensus       144 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~  171 (317)
                      .+.|..|++++..++|+|+|++++||..
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s  350 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRT  350 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcC
Confidence            4578999999999999999999997654


No 296
>3owt_C Regulatory protein SIR3; RCT domain, protein binding; 2.00A {Saccharomyces cerevisiae}
Probab=22.03  E-value=33  Score=16.82  Aligned_cols=13  Identities=31%  Similarity=0.496  Sum_probs=10.2

Q ss_pred             cCCcEEEeeeccc
Q 042913          237 EDGHIMLSDFDLC  249 (317)
Q Consensus       237 ~~~~~kl~DFG~a  249 (317)
                      +.|+.|.+||...
T Consensus         2 ekgnakmidfatl   14 (27)
T 3owt_C            2 EKGNAKMIDFATL   14 (27)
T ss_pred             CCCcceeeehHHH
Confidence            5688999999753


No 297
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=21.31  E-value=31  Score=18.49  Aligned_cols=15  Identities=27%  Similarity=0.663  Sum_probs=11.9

Q ss_pred             cccCCCCCccccccc
Q 042913          273 KSCNGFGSAKRRQEN  287 (317)
Q Consensus       273 ~~~~~~~sp~~~~~~  287 (317)
                      ..|.+|++|+|+-.+
T Consensus         9 ~ic~~f~~p~~ccsg   23 (37)
T 4aor_D            9 AICSGFGPPEQCCSG   23 (37)
T ss_dssp             CEECTTSCGGGBTTS
T ss_pred             CccCCCCCccccccc
Confidence            568899999998543


No 298
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=20.12  E-value=1.1e+02  Score=25.38  Aligned_cols=51  Identities=14%  Similarity=0.120  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeec-cCCCCcEEEccCC----cEEEeeecccccCC
Q 042913          203 AVRFFAAEVLVGLEYLHALGIIYR-DLKPENILLREDG----HIMLSDFDLCFQSD  253 (317)
Q Consensus       203 ~~~~i~~qi~~al~~LH~~~ivHr-Dikp~Nill~~~~----~~kl~DFG~a~~~~  253 (317)
                      .+..++.++-.-..++......++ -+-.+.+|+--++    .|+++||+-+....
T Consensus       167 ~~~~~l~~L~~l~~~~e~~~~f~~~rf~sSSLL~vYD~~~~~~v~lIDFAh~~~~~  222 (259)
T 2a98_A          167 ILQKYVACLEELREALEISPFFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALP  222 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHTEEECSCEEEEEECTTSCEEEEEECCTTEEECS
T ss_pred             HHHHHHHHHHHHHHHHHhCcCccceEEEeeeEEEEEeCCCcCcEEEEECCceeecC
Confidence            344555555555556665554422 3566777775443    59999999886543


Done!