Query 042918
Match_columns 285
No_of_seqs 179 out of 1445
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 10:56:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042918.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042918hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 6.5E-52 1.4E-56 387.1 16.5 266 2-272 88-411 (451)
2 PLN03004 UDP-glycosyltransfera 100.0 1.6E-51 3.4E-56 383.6 17.4 272 2-278 97-431 (451)
3 PLN02207 UDP-glycosyltransfera 100.0 8E-51 1.7E-55 380.1 18.9 269 4-277 101-434 (468)
4 PLN03015 UDP-glucosyl transfer 100.0 1E-50 2.2E-55 378.4 17.4 263 1-269 93-424 (470)
5 PLN02992 coniferyl-alcohol glu 100.0 7.6E-51 1.6E-55 381.0 16.4 263 2-271 91-427 (481)
6 PLN02670 transferase, transfer 100.0 1.1E-50 2.4E-55 379.5 16.3 261 2-272 99-430 (472)
7 PLN02173 UDP-glucosyl transfer 100.0 1E-50 2.2E-55 378.0 14.8 273 1-281 87-418 (449)
8 PLN02555 limonoid glucosyltran 100.0 2.2E-50 4.8E-55 378.5 16.9 277 2-282 100-440 (480)
9 PLN02562 UDP-glycosyltransfera 100.0 7.6E-50 1.6E-54 373.8 17.7 265 1-278 87-420 (448)
10 PLN02208 glycosyltransferase f 100.0 3.7E-50 8E-55 374.5 14.7 249 19-270 107-400 (442)
11 PLN02152 indole-3-acetate beta 100.0 1.5E-49 3.2E-54 370.7 17.3 270 1-272 89-418 (455)
12 PLN00164 glucosyltransferase; 100.0 1.2E-49 2.6E-54 375.1 16.1 264 2-271 97-431 (480)
13 PLN02167 UDP-glycosyltransfera 100.0 1.5E-49 3.3E-54 374.7 13.3 267 2-270 97-433 (475)
14 PLN02764 glycosyltransferase f 100.0 7.3E-49 1.6E-53 364.8 16.2 261 2-271 97-407 (453)
15 PLN02554 UDP-glycosyltransfera 100.0 9.7E-49 2.1E-53 369.8 14.9 274 3-278 92-448 (481)
16 PLN00414 glycosyltransferase f 100.0 1.4E-48 3E-53 364.3 15.2 247 19-270 107-401 (446)
17 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.2E-48 2.6E-53 367.5 13.5 261 2-269 101-431 (477)
18 PLN02210 UDP-glucosyl transfer 100.0 8.9E-48 1.9E-52 360.3 14.8 251 19-277 103-421 (456)
19 PLN02534 UDP-glycosyltransfera 100.0 1.5E-47 3.3E-52 360.0 15.1 261 2-270 106-443 (491)
20 PLN03007 UDP-glucosyltransfera 100.0 4.6E-47 9.9E-52 358.7 12.4 250 19-272 122-441 (482)
21 PLN02448 UDP-glycosyltransfera 100.0 1.5E-44 3.2E-49 339.9 16.3 265 2-281 95-427 (459)
22 PF00201 UDPGT: UDP-glucoronos 100.0 3.6E-41 7.8E-46 321.0 -8.8 243 19-279 119-417 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 4.5E-37 9.7E-42 291.6 13.5 245 18-279 135-440 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 1E-33 2.2E-38 269.4 11.5 254 19-280 114-442 (496)
25 TIGR01426 MGT glycosyltransfer 99.9 1.2E-23 2.7E-28 194.7 13.3 241 19-277 92-365 (392)
26 cd03784 GT1_Gtf_like This fami 99.9 6.7E-23 1.5E-27 190.0 10.8 86 181-272 288-373 (401)
27 COG1819 Glycosyl transferases, 99.7 2E-18 4.4E-23 160.1 6.0 96 170-279 281-376 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.4 4.6E-12 1E-16 113.8 15.3 80 182-267 233-316 (318)
29 TIGR00661 MJ1255 conserved hyp 99.4 3.6E-12 7.7E-17 115.1 13.5 84 181-272 229-315 (321)
30 PF04101 Glyco_tran_28_C: Glyc 99.0 1.6E-10 3.4E-15 94.4 2.0 87 181-273 55-146 (167)
31 PRK12446 undecaprenyldiphospho 98.7 1.5E-08 3.3E-13 92.7 5.9 80 184-269 237-323 (352)
32 PRK00726 murG undecaprenyldiph 98.5 2.7E-07 5.9E-12 84.2 6.1 86 183-274 237-327 (357)
33 cd03785 GT1_MurG MurG is an N- 98.2 2.5E-06 5.5E-11 77.3 6.4 97 181-283 235-337 (350)
34 COG0707 MurG UDP-N-acetylgluco 98.1 2.9E-06 6.2E-11 77.6 5.4 92 184-281 238-335 (357)
35 TIGR01133 murG undecaprenyldip 97.9 1.4E-05 3.1E-10 72.4 5.7 78 190-273 243-323 (348)
36 PRK13608 diacylglycerol glucos 97.7 6.8E-05 1.5E-09 69.6 6.0 78 182-269 257-336 (391)
37 PRK13609 diacylglycerol glucos 97.6 0.00013 2.9E-09 67.2 7.3 78 182-269 257-336 (380)
38 PLN02605 monogalactosyldiacylg 97.6 9.2E-05 2E-09 68.5 6.0 91 182-282 266-360 (382)
39 TIGR03590 PseG pseudaminic aci 97.5 6.2E-05 1.3E-09 66.7 3.1 53 182-237 225-278 (279)
40 COG4671 Predicted glycosyl tra 96.3 0.0072 1.5E-07 54.4 5.5 81 182-268 278-362 (400)
41 cd03814 GT1_like_2 This family 96.1 0.016 3.5E-07 51.7 6.7 78 181-270 247-331 (364)
42 PRK15484 lipopolysaccharide 1, 95.8 0.013 2.8E-07 54.1 4.9 93 181-282 257-355 (380)
43 cd04946 GT1_AmsK_like This fam 95.7 0.022 4.9E-07 53.1 6.0 93 182-283 290-390 (407)
44 cd03795 GT1_like_4 This family 95.6 0.018 4E-07 51.6 4.9 94 181-283 244-345 (357)
45 cd03823 GT1_ExpE7_like This fa 95.5 0.031 6.8E-07 49.6 6.2 93 181-283 243-342 (359)
46 cd05844 GT1_like_7 Glycosyltra 95.4 0.016 3.5E-07 52.4 4.0 82 181-272 245-337 (367)
47 PF00534 Glycos_transf_1: Glyc 95.4 0.032 6.9E-07 44.9 5.2 92 181-284 73-172 (172)
48 TIGR00215 lpxB lipid-A-disacch 95.3 0.012 2.7E-07 54.5 2.9 75 191-272 261-348 (385)
49 cd03794 GT1_wbuB_like This fam 95.0 0.032 7E-07 49.9 4.5 90 182-281 276-376 (394)
50 cd03818 GT1_ExpC_like This fam 94.9 0.031 6.6E-07 51.7 4.1 93 181-283 281-379 (396)
51 cd03800 GT1_Sucrose_synthase T 94.9 0.041 8.9E-07 50.2 4.9 91 181-281 283-379 (398)
52 cd03821 GT1_Bme6_like This fam 94.6 0.055 1.2E-06 48.2 4.9 78 181-270 262-344 (375)
53 PRK15427 colanic acid biosynth 94.5 0.053 1.1E-06 50.6 4.7 93 181-283 279-384 (406)
54 TIGR03492 conserved hypothetic 94.4 0.1 2.2E-06 48.7 6.4 70 191-269 290-362 (396)
55 cd03799 GT1_amsK_like This is 94.3 0.059 1.3E-06 48.2 4.5 92 181-282 236-339 (355)
56 COG1519 KdtA 3-deoxy-D-manno-o 94.2 0.078 1.7E-06 49.0 5.1 46 203-250 327-372 (419)
57 cd03798 GT1_wlbH_like This fam 94.1 0.086 1.9E-06 46.7 5.2 83 181-273 259-346 (377)
58 PRK05749 3-deoxy-D-manno-octul 93.9 0.064 1.4E-06 50.2 4.1 56 206-270 332-387 (425)
59 KOG3349 Predicted glycosyltran 93.7 0.08 1.7E-06 42.0 3.5 52 187-240 69-125 (170)
60 cd03801 GT1_YqgM_like This fam 93.5 0.24 5.1E-06 43.6 6.8 91 181-281 256-352 (374)
61 cd03807 GT1_WbnK_like This fam 93.4 0.1 2.2E-06 46.3 4.2 75 193-281 264-343 (365)
62 cd03817 GT1_UGDG_like This fam 93.3 0.19 4E-06 44.8 5.9 79 181-270 259-342 (374)
63 cd03816 GT1_ALG1_like This fam 93.3 0.16 3.6E-06 47.4 5.7 86 187-284 301-398 (415)
64 cd03825 GT1_wcfI_like This fam 93.1 0.11 2.5E-06 46.5 4.1 88 182-281 245-341 (365)
65 TIGR03088 stp2 sugar transfera 92.7 0.12 2.6E-06 47.1 3.7 80 193-282 268-350 (374)
66 cd04949 GT1_gtfA_like This fam 92.6 0.12 2.5E-06 47.1 3.5 79 184-271 264-345 (372)
67 cd03822 GT1_ecORF704_like This 92.6 0.15 3.2E-06 45.6 4.1 90 182-282 248-346 (366)
68 PRK00025 lpxB lipid-A-disaccha 92.5 0.15 3.2E-06 46.8 4.1 34 192-228 256-289 (380)
69 cd03804 GT1_wbaZ_like This fam 92.4 0.12 2.7E-06 46.6 3.3 83 179-271 240-326 (351)
70 cd03808 GT1_cap1E_like This fa 91.7 0.18 3.8E-06 44.5 3.5 80 193-282 259-341 (359)
71 TIGR03449 mycothiol_MshA UDP-N 91.6 0.45 9.8E-06 43.9 6.2 81 181-271 283-368 (405)
72 TIGR00236 wecB UDP-N-acetylglu 91.3 0.45 9.8E-06 43.4 5.8 77 182-272 256-335 (365)
73 TIGR03087 stp1 sugar transfera 91.2 0.25 5.4E-06 45.7 4.1 89 182-282 281-374 (397)
74 COG5017 Uncharacterized conser 91.2 0.17 3.7E-06 39.5 2.4 48 202-250 68-123 (161)
75 cd03805 GT1_ALG2_like This fam 91.1 0.28 6.1E-06 44.8 4.3 90 181-281 280-375 (392)
76 PF13692 Glyco_trans_1_4: Glyc 90.9 0.39 8.4E-06 36.8 4.3 76 182-269 54-133 (135)
77 PRK10307 putative glycosyl tra 90.6 0.53 1.1E-05 43.7 5.7 91 182-282 285-385 (412)
78 cd04962 GT1_like_5 This family 90.5 0.36 7.9E-06 43.6 4.4 77 183-269 255-334 (371)
79 TIGR02472 sucr_P_syn_N sucrose 89.9 0.47 1E-05 44.7 4.7 81 181-271 317-406 (439)
80 TIGR02149 glgA_Coryne glycogen 89.3 0.39 8.5E-06 43.8 3.7 80 187-271 267-352 (388)
81 cd03811 GT1_WabH_like This fam 89.2 0.47 1E-05 41.5 4.0 65 182-251 247-314 (353)
82 cd03820 GT1_amsD_like This fam 89.0 0.89 1.9E-05 39.7 5.7 71 193-272 248-320 (348)
83 PRK09814 beta-1,6-galactofuran 88.7 0.45 9.8E-06 43.1 3.6 89 181-282 207-310 (333)
84 PLN02871 UDP-sulfoquinovose:DA 88.3 0.61 1.3E-05 44.2 4.3 78 182-270 313-399 (465)
85 cd03786 GT1_UDP-GlcNAc_2-Epime 87.8 1.1 2.3E-05 40.7 5.4 75 183-271 260-337 (363)
86 cd03812 GT1_CapH_like This fam 87.3 1.4 2.9E-05 39.5 5.8 83 183-276 251-336 (358)
87 cd03813 GT1_like_3 This family 86.7 0.91 2E-05 43.2 4.5 65 209-282 384-454 (475)
88 cd03809 GT1_mtfB_like This fam 86.5 0.34 7.3E-06 43.2 1.4 76 181-268 253-333 (365)
89 PF13844 Glyco_transf_41: Glyc 85.8 1.1 2.3E-05 42.6 4.3 70 181-250 342-415 (468)
90 cd04951 GT1_WbdM_like This fam 85.3 0.76 1.6E-05 41.0 3.0 76 182-269 246-324 (360)
91 cd03796 GT1_PIG-A_like This fa 85.0 1.9 4.1E-05 39.8 5.6 77 181-269 250-331 (398)
92 PRK09922 UDP-D-galactose:(gluc 85.0 2.3 5.1E-05 38.6 6.1 55 209-272 271-325 (359)
93 TIGR02918 accessory Sec system 84.6 1.4 3.1E-05 42.3 4.7 96 183-282 378-478 (500)
94 cd03819 GT1_WavL_like This fam 84.5 1.4 3E-05 39.4 4.4 91 182-282 247-343 (355)
95 PHA01633 putative glycosyl tra 84.2 0.97 2.1E-05 41.2 3.2 75 187-268 210-304 (335)
96 PLN02275 transferase, transfer 83.4 2.4 5.3E-05 38.9 5.5 69 187-267 293-369 (371)
97 PRK15179 Vi polysaccharide bio 76.4 7 0.00015 39.3 6.5 78 182-267 575-655 (694)
98 COG3914 Spy Predicted O-linked 76.2 2.3 5E-05 41.0 2.9 43 205-249 517-561 (620)
99 cd03802 GT1_AviGT4_like This f 75.0 3 6.6E-05 36.8 3.3 76 181-268 224-305 (335)
100 PLN00142 sucrose synthase 74.4 3 6.4E-05 42.4 3.3 48 210-267 681-728 (815)
101 cd03792 GT1_Trehalose_phosphor 73.0 3.3 7.1E-05 37.7 3.1 75 182-270 253-336 (372)
102 PF02350 Epimerase_2: UDP-N-ac 71.8 8.2 0.00018 35.3 5.3 75 182-271 240-318 (346)
103 TIGR02468 sucrsPsyn_pln sucros 71.7 3.8 8.2E-05 42.8 3.4 91 182-282 549-649 (1050)
104 cd04950 GT1_like_1 Glycosyltra 71.7 7.8 0.00017 35.5 5.2 74 181-268 254-337 (373)
105 PLN02949 transferase, transfer 71.5 2.7 5.9E-05 40.0 2.2 94 181-284 335-437 (463)
106 cd04955 GT1_like_6 This family 71.1 4.7 0.0001 36.0 3.6 48 181-228 248-301 (363)
107 KOG4626 O-linked N-acetylgluco 69.4 2.6 5.7E-05 41.2 1.6 48 203-251 843-890 (966)
108 PF13524 Glyco_trans_1_2: Glyc 68.1 6.1 0.00013 28.1 3.0 63 206-281 9-73 (92)
109 cd01635 Glycosyltransferase_GT 67.6 6.4 0.00014 32.1 3.5 47 182-230 162-216 (229)
110 PRK14089 ipid-A-disaccharide s 67.5 2.6 5.7E-05 38.5 1.1 72 192-267 230-315 (347)
111 COG3980 spsG Spore coat polysa 67.5 12 0.00026 33.2 5.1 47 203-251 231-277 (318)
112 TIGR02470 sucr_synth sucrose s 67.3 5.3 0.00011 40.6 3.3 49 210-268 658-706 (784)
113 PHA01630 putative group 1 glyc 65.2 2.8 6.1E-05 38.0 0.9 40 189-228 198-242 (331)
114 PF06506 PrpR_N: Propionate ca 59.1 14 0.00029 30.2 3.8 41 3-49 112-152 (176)
115 TIGR03713 acc_sec_asp1 accesso 57.0 7.8 0.00017 37.5 2.3 70 182-268 410-485 (519)
116 PRK15490 Vi polysaccharide bio 56.7 6.4 0.00014 38.4 1.7 63 182-251 456-523 (578)
117 COG0052 RpsB Ribosomal protein 56.6 9.7 0.00021 32.9 2.6 34 19-52 156-191 (252)
118 PRK14098 glycogen synthase; Pr 54.6 18 0.00039 34.7 4.4 81 181-268 362-448 (489)
119 COG0299 PurN Folate-dependent 54.5 29 0.00064 29.0 5.0 46 3-48 12-58 (200)
120 cd01018 ZntC Metal binding pro 54.1 45 0.00097 29.1 6.5 45 3-50 204-250 (266)
121 cd03806 GT1_ALG11_like This fa 52.5 12 0.00025 35.1 2.7 79 181-271 305-392 (419)
122 PRK10125 putative glycosyl tra 51.8 11 0.00024 35.1 2.4 50 192-251 307-356 (405)
123 PRK00654 glgA glycogen synthas 50.0 15 0.00033 34.8 3.1 67 193-268 352-425 (466)
124 PRK12311 rpsB 30S ribosomal pr 49.3 15 0.00032 33.3 2.7 34 19-52 152-187 (326)
125 TIGR02095 glgA glycogen/starch 46.0 19 0.00041 34.1 3.1 68 193-269 361-435 (473)
126 TIGR00347 bioD dethiobiotin sy 45.8 52 0.0011 26.0 5.2 46 4-53 88-142 (166)
127 PHA02542 41 41 helicase; Provi 44.4 30 0.00064 33.2 4.0 46 3-48 285-352 (473)
128 TIGR02329 propionate_PrpR prop 43.9 42 0.00091 32.6 5.0 41 3-49 132-172 (526)
129 PF03033 Glyco_transf_28: Glyc 43.6 12 0.00027 28.5 1.2 32 19-50 100-131 (139)
130 cd07038 TPP_PYR_PDC_IPDC_like 41.6 42 0.00091 26.9 4.0 27 200-226 60-92 (162)
131 COG2230 Cfa Cyclopropane fatty 41.0 26 0.00057 31.0 2.9 40 206-245 80-121 (283)
132 cd03791 GT1_Glycogen_synthase_ 40.4 22 0.00047 33.6 2.5 65 194-268 367-439 (476)
133 PRK01021 lpxB lipid-A-disaccha 39.5 68 0.0015 31.7 5.7 44 5-51 299-347 (608)
134 cd01425 RPS2 Ribosomal protein 39.3 21 0.00046 29.7 2.0 34 18-51 126-161 (193)
135 PF06925 MGDG_synth: Monogalac 38.8 51 0.0011 26.4 4.2 32 18-49 88-125 (169)
136 PRK14089 ipid-A-disaccharide s 38.4 57 0.0012 29.9 4.8 35 18-52 75-114 (347)
137 PF04007 DUF354: Protein of un 38.3 85 0.0018 28.6 5.9 67 189-267 240-306 (335)
138 PRK03359 putative electron tra 36.9 64 0.0014 28.2 4.7 30 19-48 112-147 (256)
139 CHL00067 rps2 ribosomal protei 36.6 31 0.00066 29.7 2.6 35 18-52 160-196 (230)
140 PF01297 TroA: Periplasmic sol 36.5 53 0.0012 28.3 4.2 44 3-49 186-231 (256)
141 PRK05299 rpsB 30S ribosomal pr 36.3 25 0.00054 30.8 2.0 33 19-51 157-191 (258)
142 PLN02501 digalactosyldiacylgly 35.9 35 0.00075 34.5 3.1 43 187-229 607-652 (794)
143 TIGR00236 wecB UDP-N-acetylglu 35.7 70 0.0015 28.9 5.0 28 19-46 86-116 (365)
144 COG4370 Uncharacterized protei 35.5 53 0.0011 29.7 3.9 60 187-251 301-364 (412)
145 cd01017 AdcA Metal binding pro 34.0 94 0.002 27.3 5.4 44 3-49 207-252 (282)
146 cd07039 TPP_PYR_POX Pyrimidine 33.8 40 0.00088 27.1 2.8 28 199-226 63-96 (164)
147 cd01981 Pchlide_reductase_B Pc 33.8 73 0.0016 29.9 4.9 27 19-48 370-396 (430)
148 PF12000 Glyco_trans_4_3: Gkyc 33.7 1.2E+02 0.0025 24.9 5.4 44 4-48 52-96 (171)
149 cd07037 TPP_PYR_MenD Pyrimidin 33.6 42 0.00091 27.1 2.8 28 199-226 60-93 (162)
150 PRK12342 hypothetical protein; 33.2 74 0.0016 27.8 4.4 30 19-48 109-144 (254)
151 TIGR01011 rpsB_bact ribosomal 32.4 31 0.00068 29.5 2.0 33 19-51 155-189 (225)
152 TIGR02919 accessory Sec system 32.2 31 0.00068 32.7 2.1 75 182-268 329-408 (438)
153 PRK09545 znuA high-affinity zi 30.4 1.2E+02 0.0025 27.3 5.4 44 3-49 239-284 (311)
154 PLN02846 digalactosyldiacylgly 30.3 31 0.00067 33.0 1.7 39 187-227 290-332 (462)
155 PRK13608 diacylglycerol glucos 29.6 89 0.0019 28.8 4.7 31 19-49 104-136 (391)
156 PF07894 DUF1669: Protein of u 29.0 92 0.002 27.7 4.3 46 3-49 133-183 (284)
157 PF00391 PEP-utilizers: PEP-ut 28.6 90 0.0019 21.7 3.5 26 20-45 31-58 (80)
158 TIGR01278 DPOR_BchB light-inde 28.6 97 0.0021 30.0 4.9 26 19-47 364-389 (511)
159 PF00282 Pyridoxal_deC: Pyrido 28.6 1.6E+02 0.0036 27.1 6.2 68 199-268 103-188 (373)
160 CHL00076 chlB photochlorophyll 28.5 91 0.002 30.2 4.6 26 19-47 374-399 (513)
161 TIGR01012 Sa_S2_E_A ribosomal 28.4 79 0.0017 26.5 3.6 32 19-50 108-141 (196)
162 TIGR03568 NeuC_NnaA UDP-N-acet 27.6 98 0.0021 28.4 4.5 40 1-46 81-123 (365)
163 PF04007 DUF354: Protein of un 27.4 1.3E+02 0.0027 27.5 5.1 32 18-50 82-113 (335)
164 PRK04020 rps2P 30S ribosomal p 27.4 85 0.0018 26.5 3.7 32 19-50 114-147 (204)
165 PF02350 Epimerase_2: UDP-N-ac 27.2 1.1E+02 0.0025 27.8 4.8 40 4-49 58-100 (346)
166 PRK00025 lpxB lipid-A-disaccha 27.1 1.2E+02 0.0026 27.4 5.0 31 18-48 84-117 (380)
167 COG2099 CobK Precorrin-6x redu 26.9 1.3E+02 0.0027 26.4 4.7 38 3-47 56-100 (257)
168 PF06345 Drf_DAD: DRF Autoregu 26.8 37 0.0008 15.6 0.8 12 209-220 3-14 (15)
169 PLN02880 tyrosine decarboxylas 26.7 1.4E+02 0.0031 28.6 5.6 68 200-268 147-233 (490)
170 PRK00090 bioD dithiobiotin syn 26.1 1.6E+02 0.0034 24.6 5.2 42 5-50 93-143 (222)
171 TIGR00215 lpxB lipid-A-disacch 26.1 1.5E+02 0.0032 27.4 5.4 29 18-46 88-119 (385)
172 PF04493 Endonuclease_5: Endon 25.8 87 0.0019 26.4 3.5 40 4-47 78-124 (206)
173 PF10087 DUF2325: Uncharacteri 25.8 2.2E+02 0.0047 20.4 5.3 36 19-54 48-89 (97)
174 cd01019 ZnuA Zinc binding prot 25.7 1.6E+02 0.0034 26.0 5.4 44 3-49 215-260 (286)
175 PRK10017 colanic acid biosynth 25.7 1.3E+02 0.0029 28.3 5.1 65 193-267 323-388 (426)
176 PRK02910 light-independent pro 25.6 1.2E+02 0.0026 29.3 5.0 26 19-47 362-387 (519)
177 PTZ00254 40S ribosomal protein 25.3 96 0.0021 27.0 3.7 32 19-50 118-151 (249)
178 PF06506 PrpR_N: Propionate ca 25.1 28 0.0006 28.3 0.4 38 196-234 31-68 (176)
179 PRK06321 replicative DNA helic 24.5 1.4E+02 0.0031 28.5 5.1 42 4-47 323-386 (472)
180 PF02353 CMAS: Mycolic acid cy 24.3 54 0.0012 28.9 2.1 43 203-245 67-111 (273)
181 PF03796 DnaB_C: DnaB-like hel 24.0 1.3E+02 0.0027 26.0 4.4 45 3-48 115-178 (259)
182 PF05159 Capsule_synth: Capsul 24.0 76 0.0016 27.5 3.0 41 183-226 185-225 (269)
183 PF04558 tRNA_synt_1c_R1: Glut 23.7 55 0.0012 26.6 1.8 28 233-268 102-129 (164)
184 COG0381 WecB UDP-N-acetylgluco 23.7 1.2E+02 0.0025 28.3 4.1 76 187-276 271-346 (383)
185 COG1435 Tdk Thymidine kinase [ 23.5 1.5E+02 0.0033 24.9 4.4 28 20-47 83-117 (201)
186 cd01980 Chlide_reductase_Y Chl 23.5 1.2E+02 0.0026 28.4 4.4 26 19-47 350-375 (416)
187 PRK04940 hypothetical protein; 23.4 2.4E+02 0.0052 23.3 5.5 31 20-50 61-92 (180)
188 cd01141 TroA_d Periplasmic bin 23.4 1.1E+02 0.0024 24.5 3.8 30 19-48 69-100 (186)
189 PRK13609 diacylglycerol glucos 23.3 1.5E+02 0.0033 26.9 5.0 29 19-47 104-134 (380)
190 PF01497 Peripla_BP_2: Peripla 23.3 1.4E+02 0.0029 24.9 4.4 32 19-50 60-93 (238)
191 cd07035 TPP_PYR_POX_like Pyrim 23.2 77 0.0017 24.7 2.7 28 199-226 59-92 (155)
192 cd03466 Nitrogenase_NifN_2 Nit 22.9 1.2E+02 0.0026 28.5 4.3 25 19-46 372-396 (429)
193 PRK08506 replicative DNA helic 22.9 1.7E+02 0.0038 27.9 5.4 43 4-47 288-349 (472)
194 PRK00784 cobyric acid synthase 22.8 1.5E+02 0.0033 28.5 4.9 31 19-49 125-166 (488)
195 PF01280 Ribosomal_L19e: Ribos 22.2 26 0.00056 27.9 -0.3 33 236-268 8-47 (148)
196 PF12965 DUF3854: Domain of un 22.1 84 0.0018 24.3 2.6 33 194-227 5-37 (130)
197 TIGR03772 anch_rpt_subst ancho 22.1 2E+02 0.0043 27.7 5.5 42 3-47 407-452 (479)
198 PLN02331 phosphoribosylglycina 21.9 2E+02 0.0044 24.2 5.0 45 3-47 11-56 (207)
199 cd01976 Nitrogenase_MoFe_alpha 21.7 1.2E+02 0.0025 28.6 3.9 26 19-47 369-394 (421)
200 PF06204 CBM_X: Putative carbo 21.7 53 0.0011 22.2 1.2 23 188-210 24-46 (66)
201 PRK15411 rcsA colanic acid cap 21.6 1.6E+02 0.0035 24.4 4.4 42 5-49 36-86 (207)
202 cd01965 Nitrogenase_MoFe_beta_ 21.5 1.4E+02 0.0031 27.9 4.5 38 4-47 359-396 (428)
203 COG5310 Homospermidine synthas 21.4 72 0.0016 29.1 2.2 35 175-213 273-307 (481)
204 cd01020 TroA_b Metal binding p 20.9 2.1E+02 0.0046 24.8 5.2 41 3-46 193-238 (264)
205 KOG3125 Thymidine kinase [Nucl 20.8 1.9E+02 0.004 24.5 4.3 57 203-260 74-147 (234)
206 KOG0853 Glycosyltransferase [C 20.4 48 0.001 31.9 1.0 72 194-273 361-435 (495)
207 PF02684 LpxB: Lipid-A-disacch 20.2 2.5E+02 0.0053 26.1 5.6 80 190-272 253-341 (373)
208 PRK05636 replicative DNA helic 20.1 1.1E+02 0.0023 29.7 3.4 42 4-47 362-422 (505)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=6.5e-52 Score=387.13 Aligned_cols=266 Identities=22% Similarity=0.368 Sum_probs=194.8
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhcc-CCcccc-cccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFI-SGTAIK-KHMI 79 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~-~~~~ 79 (285)
..+++++++++..+.+++++|||+|.+++|+.++|+++|||++.|++++++.+++++ +++.+...+. ..+... ....
T Consensus 88 ~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 166 (451)
T PLN02410 88 QVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRS-VFDKLYANNVLAPLKEPKGQQN 166 (451)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHH-HHHHHHhccCCCCccccccCcc
Confidence 467888888764322146899999999999999999999999999999999988777 6554433211 000000 0001
Q ss_pred ccCCCCcc-----------------------cccccCcceEEEcccccCChhhhhcC-----CCcccccccccccC----
Q 042918 80 QLAPTMAT-----------------------IHSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNR---- 127 (285)
Q Consensus 80 ~~~pg~~~-----------------------~~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~---- 127 (285)
..+||+|+ ...+.+++++++|||++||+.+.+.+ +++++|||++....
T Consensus 167 ~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~ 246 (451)
T PLN02410 167 ELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTS 246 (451)
T ss_pred ccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCcc
Confidence 12333321 01134678999999999999887754 47999999986321
Q ss_pred CCCCC--CCCC-C----CCCceeeeee---cCccceE-------------EEEEcCCCCCC-CCccccccCccccccccc
Q 042918 128 LGNSA--GFFW-P----EDSTLFSTES---YSRNRFN-------------LWAVRPDMTDN-SNDDAYQKGFQDGVGTRG 183 (285)
Q Consensus 128 ~~~~~--~~~~-~----~~~~~~s~~~---~~~~q~~-------------lW~~~~~~~~~-~~~~~lp~~f~~~~~~~~ 183 (285)
+..+. ..-| + ...+|+++++ ++.+|+. ||+++++...+ +..+.+|++|+||+++||
T Consensus 247 ~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g 326 (451)
T PLN02410 247 LLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRG 326 (451)
T ss_pred ccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCe
Confidence 11111 0112 1 2345666544 3444443 99999542111 111148999999999999
Q ss_pred eeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHH
Q 042918 184 QMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTT 263 (285)
Q Consensus 184 ~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ 263 (285)
+|++|+||.+||+|++|+||||||||||++||+++|||||+||+++||+.||+++++.||+|+++.. .+++++|++
T Consensus 327 ~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~----~~~~~~v~~ 402 (451)
T PLN02410 327 YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG----DLDRGAVER 402 (451)
T ss_pred EEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC----cccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988899999972 389999999
Q ss_pred HHHHHHHHH
Q 042918 264 RWIKCSVMK 272 (285)
Q Consensus 264 ai~~~~~~~ 272 (285)
+|++++.++
T Consensus 403 av~~lm~~~ 411 (451)
T PLN02410 403 AVKRLMVEE 411 (451)
T ss_pred HHHHHHcCC
Confidence 999966443
No 2
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.6e-51 Score=383.59 Aligned_cols=272 Identities=18% Similarity=0.295 Sum_probs=199.3
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhc-cCCccccccccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLF-ISGTAIKKHMIQ 80 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 80 (285)
..+|+++++++.. + ++++|||+|.+++|+.++|+++|||+++|++++++.++++. |+|...... ..... +....
T Consensus 97 ~~~~~~~l~~l~~-~-~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~-~~~~~~~~~~~~~~~--~~~~v 171 (451)
T PLN03004 97 NPSVHRTLFSLSR-N-FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSF-YLPTIDETTPGKNLK--DIPTV 171 (451)
T ss_pred hHHHHHHHHhcCC-C-CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHH-HHHhccccccccccc--cCCee
Confidence 5678888888732 2 35799999999999999999999999999999999998888 766422110 00000 00001
Q ss_pred cCCCCcc------------------------cccccCcceEEEcccccCChhhhhcC------CCcccccccccccCCC-
Q 042918 81 LAPTMAT------------------------IHSTKLGEWMLCKSKYDLEPGALALI------PELLPLGQLLASNRLG- 129 (285)
Q Consensus 81 ~~pg~~~------------------------~~~~~~~~~vlvns~~~le~~~~~~~------~~v~~VGpl~~~~~~~- 129 (285)
.+||+|. ...+.+++++|+|||++||+.+.+.+ +++++||||+......
T Consensus 172 ~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~ 251 (451)
T PLN03004 172 HIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIED 251 (451)
T ss_pred cCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccc
Confidence 2333321 12245678999999999999877654 4799999998532111
Q ss_pred -CC-C---CCCC-C----CCCceeeeee---cCccceE-------------EEEEcCCCCCC----CCccccccCccccc
Q 042918 130 -NS-A---GFFW-P----EDSTLFSTES---YSRNRFN-------------LWAVRPDMTDN----SNDDAYQKGFQDGV 179 (285)
Q Consensus 130 -~~-~---~~~~-~----~~~~~~s~~~---~~~~q~~-------------lW~~~~~~~~~----~~~~~lp~~f~~~~ 179 (285)
.. . ...| + ...+|+|+++ ++.+|+. ||+++.+...+ +..+.+|++|+||+
T Consensus 252 ~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~ 331 (451)
T PLN03004 252 RNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRT 331 (451)
T ss_pred cccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhc
Confidence 00 0 0112 1 2345666544 4445543 99999642100 11213899999999
Q ss_pred cccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 180 GTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 180 ~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
+++|+++ +|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|++++.++.+.+++
T Consensus 332 ~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~ 411 (451)
T PLN03004 332 EDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSS 411 (451)
T ss_pred cCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCH
Confidence 9999876 999999999999999999999999999999999999999999999999999987799999998653346899
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 042918 259 KKLTTRWIKCSVMKILKHVP 278 (285)
Q Consensus 259 ~~l~~ai~~~~~~~~~~~~~ 278 (285)
++|+++|++++.+++|++.+
T Consensus 412 e~l~~av~~vm~~~~~r~~a 431 (451)
T PLN03004 412 TEVEKRVQEIIGECPVRERT 431 (451)
T ss_pred HHHHHHHHHHhcCHHHHHHH
Confidence 99999999976666665544
No 3
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=8e-51 Score=380.08 Aligned_cols=269 Identities=19% Similarity=0.282 Sum_probs=192.0
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccC-CccccccccccC
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFIS-GTAIKKHMIQLA 82 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~ 82 (285)
++++++++...++ ++++|||+|.|++|+.++|+++|||+++|++++++.++++. ++|........ .++..+ ....+
T Consensus 101 ~~~~~l~~~~~~~-~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v 177 (468)
T PLN02207 101 IVMDILSSLALDG-VKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQ-YLADRHSKDTSVFVRNSE-EMLSI 177 (468)
T ss_pred HHHHHHHHhccCC-CCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHH-HhhhccccccccCcCCCC-CeEEC
Confidence 4555555442222 34699999999999999999999999999999998888877 66543211000 000001 11123
Q ss_pred CCC-cc----------------------cccccCcceEEEcccccCChhhh------hcCCCccccccccccc--CCCC-
Q 042918 83 PTM-AT----------------------IHSTKLGEWMLCKSKYDLEPGAL------ALIPELLPLGQLLASN--RLGN- 130 (285)
Q Consensus 83 pg~-~~----------------------~~~~~~~~~vlvns~~~le~~~~------~~~~~v~~VGpl~~~~--~~~~- 130 (285)
||+ |+ ...+.+++++|+|||++||+++. +..|++++|||++... +.+.
T Consensus 178 Pgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~ 257 (468)
T PLN02207 178 PGFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQ 257 (468)
T ss_pred CCCCCCCChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCcc
Confidence 443 11 12245789999999999999744 3457899999998642 1221
Q ss_pred ------CCCCCCC----CCCceeeeee---cCccceE-------------EEEEcCCCCCCCCccccccCccccccccce
Q 042918 131 ------SAGFFWP----EDSTLFSTES---YSRNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGVGTRGQ 184 (285)
Q Consensus 131 ------~~~~~~~----~~~~~~s~~~---~~~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~ 184 (285)
+...+++ ...+|+++++ ++.+|+. ||+++++... ... .+|+||++|+++||+
T Consensus 258 ~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~-~~~-~lp~~f~er~~~~g~ 335 (468)
T PLN02207 258 DLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVT-NDD-LLPEGFLDRVSGRGM 335 (468)
T ss_pred ccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCcc-ccc-cCCHHHHhhcCCCeE
Confidence 0011111 2345666544 3334433 9999964211 122 689999999999999
Q ss_pred eeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC----CCCCccHHH
Q 042918 185 MVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT----KMGSSQGKK 260 (285)
Q Consensus 185 v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~----~~~~~~~~~ 260 (285)
|++|+||.+||+||+|+||||||||||++||+++|||||+||+++||+.||+++++.||+|+++..+ .++.+++++
T Consensus 336 i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~ 415 (468)
T PLN02207 336 ICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANE 415 (468)
T ss_pred EEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999999998889999988532 124579999
Q ss_pred HHHHHHHHHH--HHHhhcc
Q 042918 261 LTTRWIKCSV--MKILKHV 277 (285)
Q Consensus 261 l~~ai~~~~~--~~~~~~~ 277 (285)
|+++|++++. .++|++.
T Consensus 416 i~~av~~vm~~~~~~~r~~ 434 (468)
T PLN02207 416 IETAIRCVMNKDNNVVRKR 434 (468)
T ss_pred HHHHHHHHHhcchHHHHHH
Confidence 9999999654 2344443
No 4
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1e-50 Score=378.41 Aligned_cols=263 Identities=20% Similarity=0.357 Sum_probs=192.4
Q ss_pred CchHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCc-eEEEecchHHHHHHHhhhhhHHHhhccCCcccccccc
Q 042918 1 MRGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIR-RAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMI 79 (285)
Q Consensus 1 ~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP-~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (285)
+.++|+++|+++. .+++|||+|.|++|+.++|+++||| .++|++++++.+.+++ |+|..............+.+
T Consensus 93 ~~~~~~~~l~~l~----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~-~l~~~~~~~~~~~~~~~~~~ 167 (470)
T PLN03015 93 MKPAVRDAVKSMK----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMV-YLPVLDTVVEGEYVDIKEPL 167 (470)
T ss_pred chHHHHHHHHhcC----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHH-hhhhhhcccccccCCCCCee
Confidence 4678899998874 2589999999999999999999999 6888888888877777 76653210000000001111
Q ss_pred ccCCCCcc------------------------cccccCcceEEEcccccCChhhhhcC-----------CCccccccccc
Q 042918 80 QLAPTMAT------------------------IHSTKLGEWMLCKSKYDLEPGALALI-----------PELLPLGQLLA 124 (285)
Q Consensus 80 ~~~pg~~~------------------------~~~~~~~~~vlvns~~~le~~~~~~~-----------~~v~~VGpl~~ 124 (285)
.+||+|+ ...+.+++++|+|||++||+.+.+.+ +++|+|||++.
T Consensus 168 -~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~ 246 (470)
T PLN03015 168 -KIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVR 246 (470)
T ss_pred -eCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCC
Confidence 2344432 11245789999999999999877654 46999999985
Q ss_pred ccCCCC-C-CCCCC-C----CCCceeeee---ecCccceE-------------EEEEcCCCC--------CCCCcccccc
Q 042918 125 SNRLGN-S-AGFFW-P----EDSTLFSTE---SYSRNRFN-------------LWAVRPDMT--------DNSNDDAYQK 173 (285)
Q Consensus 125 ~~~~~~-~-~~~~~-~----~~~~~~s~~---~~~~~q~~-------------lW~~~~~~~--------~~~~~~~lp~ 173 (285)
...... + ...-| + ....|++++ +++.+|+. ||++|.+.. ..+..+.+|+
T Consensus 247 ~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~ 326 (470)
T PLN03015 247 TNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPE 326 (470)
T ss_pred CcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCCh
Confidence 321111 1 01112 1 234566644 44555543 999985321 0011225899
Q ss_pred Cccccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeec-C
Q 042918 174 GFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNK-T 251 (285)
Q Consensus 174 ~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~-~ 251 (285)
||+||++++|+++ +|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++.. +
T Consensus 327 ~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~ 406 (470)
T PLN03015 327 GFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP 406 (470)
T ss_pred HHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc
Confidence 9999999999876 9999999999999999999999999999999999999999999999999999888999999963 2
Q ss_pred CCCCccHHHHHHHHHHHH
Q 042918 252 KMGSSQGKKLTTRWIKCS 269 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~ 269 (285)
+.+.+++++|+++|+++|
T Consensus 407 ~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 407 SEKVIGREEVASLVRKIV 424 (470)
T ss_pred cCCccCHHHHHHHHHHHH
Confidence 234799999999999955
No 5
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=7.6e-51 Score=381.03 Aligned_cols=263 Identities=22% Similarity=0.350 Sum_probs=192.6
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccccccccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQL 81 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (285)
.++|+++++++. .+++|||+|.+++|+.++|+++|||+++|++++++.++++. |+|.+.............. ..
T Consensus 91 ~~~~~~~l~~~~----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 164 (481)
T PLN02992 91 VPTLRSKIAEMH----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSI-YYPTLDKDIKEEHTVQRKP-LA 164 (481)
T ss_pred HHHHHHHHHhcC----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHH-hhhhhccccccccccCCCC-cc
Confidence 467888887752 36899999999999999999999999999999998887776 6654311100000000000 11
Q ss_pred CCCCcc------------------------cccccCcceEEEcccccCChhhhhcC-----------CCccccccccccc
Q 042918 82 APTMAT------------------------IHSTKLGEWMLCKSKYDLEPGALALI-----------PELLPLGQLLASN 126 (285)
Q Consensus 82 ~pg~~~------------------------~~~~~~~~~vlvns~~~le~~~~~~~-----------~~v~~VGpl~~~~ 126 (285)
+||+|+ ...+.+++++|+|||++||+.+.+.+ +++|+||||++..
T Consensus 165 iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~ 244 (481)
T PLN02992 165 MPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPI 244 (481)
T ss_pred cCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCc
Confidence 222221 12245788999999999999888753 4699999998642
Q ss_pred CC-CCCC-CCCC-C----CCCceeeee---ecCccceE-------------EEEEcCCCCC---------------CCCc
Q 042918 127 RL-GNSA-GFFW-P----EDSTLFSTE---SYSRNRFN-------------LWAVRPDMTD---------------NSND 168 (285)
Q Consensus 127 ~~-~~~~-~~~~-~----~~~~~~s~~---~~~~~q~~-------------lW~~~~~~~~---------------~~~~ 168 (285)
.. ..+. ..-| + ...+|++++ .++.+|+. ||++|++... +...
T Consensus 245 ~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~ 324 (481)
T PLN02992 245 QSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTP 324 (481)
T ss_pred CCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchh
Confidence 11 1110 1112 1 234567754 44445543 9999853110 0112
Q ss_pred cccccCccccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEE
Q 042918 169 DAYQKGFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQR 247 (285)
Q Consensus 169 ~~lp~~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~ 247 (285)
+.+|+||+||++++|+++ +|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.+|+|++
T Consensus 325 ~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~ 404 (481)
T PLN02992 325 EYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVR 404 (481)
T ss_pred hhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEE
Confidence 258999999999999887 9999999999999999999999999999999999999999999999999999756999999
Q ss_pred eecCCCCCccHHHHHHHHHHHHHH
Q 042918 248 FNKTKMGSSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 248 l~~~~~~~~~~~~l~~ai~~~~~~ 271 (285)
++.. ++.+++++|+++|++++.+
T Consensus 405 ~~~~-~~~~~~~~l~~av~~vm~~ 427 (481)
T PLN02992 405 SDDP-KEVISRSKIEALVRKVMVE 427 (481)
T ss_pred ecCC-CCcccHHHHHHHHHHHhcC
Confidence 9863 2468999999999996544
No 6
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.1e-50 Score=379.51 Aligned_cols=261 Identities=22% Similarity=0.337 Sum_probs=189.3
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccccccc--
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMI-- 79 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-- 79 (285)
+++|+++++++ +++|||+|.|++|+.++|+++|||+++|++++++.+++++ +.+.....+. .....+..
T Consensus 99 ~~~~~~~l~~~------~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~-~~~~~~~~~~--~~~~~~~~~~ 169 (472)
T PLN02670 99 EPPLTTFLETS------KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIG-PPSSLMEGGD--LRSTAEDFTV 169 (472)
T ss_pred HHHHHHHHHhC------CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHh-hhHhhhhccc--CCCccccccC
Confidence 44566666553 5899999999999999999999999999999998887766 5433322211 00000000
Q ss_pred --ccCC----------CCcc------------------cccccCcceEEEcccccCChhhhhcC-----CCccccccccc
Q 042918 80 --QLAP----------TMAT------------------IHSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLA 124 (285)
Q Consensus 80 --~~~p----------g~~~------------------~~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~ 124 (285)
..+| .+|. ...+.+++++|+|||++||+.+.+.+ +++++|||+++
T Consensus 170 ~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~ 249 (472)
T PLN02670 170 VPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPP 249 (472)
T ss_pred CCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCc
Confidence 0001 1110 11234678999999999999988764 47999999976
Q ss_pred c-cC-C-CC--C------CCCCCC----CCCceeeee---ecCccceE-------------EEEEcCCCCC-CCCccccc
Q 042918 125 S-NR-L-GN--S------AGFFWP----EDSTLFSTE---SYSRNRFN-------------LWAVRPDMTD-NSNDDAYQ 172 (285)
Q Consensus 125 ~-~~-~-~~--~------~~~~~~----~~~~~~s~~---~~~~~q~~-------------lW~~~~~~~~-~~~~~~lp 172 (285)
. .. . .. + ...+++ ...+|+|++ .++.+|+. ||+++++... ....+.+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp 329 (472)
T PLN02670 250 VIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLP 329 (472)
T ss_pred cccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCC
Confidence 3 11 1 10 0 001111 233567744 44555543 9999964211 11112699
Q ss_pred cCccccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 173 KGFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 173 ~~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
+||++|+++||+++ +|+||.+||+||+|++|||||||||++||+++|||||+||+++||+.||+++++ +|+|+++++.
T Consensus 330 ~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~ 408 (472)
T PLN02670 330 DGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRD 408 (472)
T ss_pred hHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeecc
Confidence 99999999999987 999999999999999999999999999999999999999999999999999986 8999999764
Q ss_pred C-CCCccHHHHHHHHHHHHHHH
Q 042918 252 K-MGSSQGKKLTTRWIKCSVMK 272 (285)
Q Consensus 252 ~-~~~~~~~~l~~ai~~~~~~~ 272 (285)
+ ++.+++++|+++|++++.++
T Consensus 409 ~~~~~~~~e~i~~av~~vm~~~ 430 (472)
T PLN02670 409 ERDGSFTSDSVAESVRLAMVDD 430 (472)
T ss_pred ccCCcCcHHHHHHHHHHHhcCc
Confidence 3 35699999999999976544
No 7
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-50 Score=378.00 Aligned_cols=273 Identities=23% Similarity=0.391 Sum_probs=194.1
Q ss_pred CchHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhc----cCCccc-c
Q 042918 1 MRGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLF----ISGTAI-K 75 (285)
Q Consensus 1 ~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~----~~~~~~-~ 75 (285)
+.++|+++|+++..++ ++++|||+|.|++|+.++|+++|||++.|++++++.+..++ + +...... .++++. +
T Consensus 87 ~~~~~~~~l~~~~~~~-~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~-~-~~~~~~~~~~~~pg~p~l~ 163 (449)
T PLN02173 87 GSKTVADIIRKHQSTD-NPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINY-L-SYINNGSLTLPIKDLPLLE 163 (449)
T ss_pred hhHHHHHHHHHhhccC-CCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHH-h-HHhccCCccCCCCCCCCCC
Confidence 3568899998864332 34599999999999999999999999999999988875544 3 2111100 122221 0
Q ss_pred cccc-ccC----CCCcc-------cccccCcceEEEcccccCChhhhhcC---CCccccccccccc----CC--CC----
Q 042918 76 KHMI-QLA----PTMAT-------IHSTKLGEWMLCKSKYDLEPGALALI---PELLPLGQLLASN----RL--GN---- 130 (285)
Q Consensus 76 ~~~~-~~~----pg~~~-------~~~~~~~~~vlvns~~~le~~~~~~~---~~v~~VGpl~~~~----~~--~~---- 130 (285)
...+ .+. ++-.. +..+.+++++|+|||++||+.+.+.+ +++|+|||+++.. .. ..
T Consensus 164 ~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~ 243 (449)
T PLN02173 164 LQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDNDYDL 243 (449)
T ss_pred hhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhccccccccccccc
Confidence 0000 000 00000 23345788999999999999877765 4799999997421 00 00
Q ss_pred -----CC---CCCCC-----CCCceeeeeec---CccceE-----------EEEEcCCCCCCCCccccccCccccc-ccc
Q 042918 131 -----SA---GFFWP-----EDSTLFSTESY---SRNRFN-----------LWAVRPDMTDNSNDDAYQKGFQDGV-GTR 182 (285)
Q Consensus 131 -----~~---~~~~~-----~~~~~~s~~~~---~~~q~~-----------lW~~~~~~~~~~~~~~lp~~f~~~~-~~~ 182 (285)
+. ..-|. ....|+++++. +.+|+. ||+++.+ +.. .+|++|++|+ +++
T Consensus 244 ~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~----~~~-~lp~~~~~~~~~~~ 318 (449)
T PLN02173 244 NLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRAS----EES-KLPPGFLETVDKDK 318 (449)
T ss_pred cccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEecc----chh-cccchHHHhhcCCc
Confidence 00 00121 12456665543 334433 9999964 122 6899999999 466
Q ss_pred ceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC-CCCccHHHH
Q 042918 183 GQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK-MGSSQGKKL 261 (285)
Q Consensus 183 ~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~-~~~~~~~~l 261 (285)
++|++|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++ ++.+++++|
T Consensus 319 ~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v 398 (449)
T PLN02173 319 SLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEI 398 (449)
T ss_pred eEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHH
Confidence 8888999999999999999999999999999999999999999999999999999999899999997643 346899999
Q ss_pred HHHHHHHHHHHHhhccCccc
Q 042918 262 TTRWIKCSVMKILKHVPWNS 281 (285)
Q Consensus 262 ~~ai~~~~~~~~~~~~~~~~ 281 (285)
+++|++++..++.+++-.|+
T Consensus 399 ~~av~~vm~~~~~~~~r~~a 418 (449)
T PLN02173 399 EFSIKEVMEGEKSKEMKENA 418 (449)
T ss_pred HHHHHHHhcCChHHHHHHHH
Confidence 99999976555444444443
No 8
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.2e-50 Score=378.52 Aligned_cols=277 Identities=21% Similarity=0.399 Sum_probs=197.7
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccccccccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQL 81 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (285)
+++|+++|+++..++ ++++|||+|.+++|+.++|+++|||+++|++++++.+++++ +++..... .......+..+ .
T Consensus 100 ~~~l~~~l~~~~~~~-~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~-~~~~~~~~-~~~~~~~~~~~-~ 175 (480)
T PLN02555 100 KREIPNLVKRYAEQG-RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYY-HYYHGLVP-FPTETEPEIDV-Q 175 (480)
T ss_pred hHHHHHHHHHHhccC-CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHH-HHhhcCCC-cccccCCCcee-e
Confidence 568888898775333 35699999999999999999999999999999999988877 65421000 00000000001 1
Q ss_pred CCCCcc--------------------------cccccCcceEEEcccccCChhhhhcC---CCcccccccccccC-C-C-
Q 042918 82 APTMAT--------------------------IHSTKLGEWMLCKSKYDLEPGALALI---PELLPLGQLLASNR-L-G- 129 (285)
Q Consensus 82 ~pg~~~--------------------------~~~~~~~~~vlvns~~~le~~~~~~~---~~v~~VGpl~~~~~-~-~- 129 (285)
+||+|. +..+.+++++|+|||++||+.+.+.+ .+++.|||++.... . .
T Consensus 176 iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v~~iGPl~~~~~~~~~~ 255 (480)
T PLN02555 176 LPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGPLFKMAKTPNSD 255 (480)
T ss_pred cCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCEEEeCcccCcccccccc
Confidence 233321 12234678999999999999877755 24999999975321 0 0
Q ss_pred --C---CC---C-CCCC----CCCceeeeeec---CccceE-------------EEEEcCCCCCC-CCccccccCccccc
Q 042918 130 --N---SA---G-FFWP----EDSTLFSTESY---SRNRFN-------------LWAVRPDMTDN-SNDDAYQKGFQDGV 179 (285)
Q Consensus 130 --~---~~---~-~~~~----~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~~-~~~~~lp~~f~~~~ 179 (285)
. +. . .+++ ....|++++++ +.+|+. ||++++..... .....+|++|++|+
T Consensus 256 ~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~ 335 (480)
T PLN02555 256 VKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKA 335 (480)
T ss_pred ccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhc
Confidence 0 00 0 1111 12356775543 334432 99998531110 11125899999999
Q ss_pred cccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC--CCCCcc
Q 042918 180 GTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT--KMGSSQ 257 (285)
Q Consensus 180 ~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~--~~~~~~ 257 (285)
++||+|++|+||.+||+||+|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++... +.+.++
T Consensus 336 ~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~ 415 (480)
T PLN02555 336 GDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLIT 415 (480)
T ss_pred CCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCc
Confidence 999999999999999999999999999999999999999999999999999999999999989999999632 134689
Q ss_pred HHHHHHHHHHHHHHHHhhccCcccc
Q 042918 258 GKKLTTRWIKCSVMKILKHVPWNSR 282 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~~~~~~~~~~~ 282 (285)
+++|+++|++++..++.++.-+|++
T Consensus 416 ~~~v~~~v~~vm~~~~g~~~r~ra~ 440 (480)
T PLN02555 416 REEVAECLLEATVGEKAAELKQNAL 440 (480)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHH
Confidence 9999999999664444444444443
No 9
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=7.6e-50 Score=373.78 Aligned_cols=265 Identities=22% Similarity=0.428 Sum_probs=195.7
Q ss_pred CchHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhcc---CCcccccc
Q 042918 1 MRGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFI---SGTAIKKH 77 (285)
Q Consensus 1 ~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~ 77 (285)
++++++++++++... .+++|||+|.+++|+.++|+++|||+++|++++++.+.+++ ++|.....+. .+.+...+
T Consensus 87 ~~~~l~~ll~~l~~~--~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (448)
T PLN02562 87 MPPQLERLLHKLDED--GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQ-AIPELVRTGLISETGCPRQLE 163 (448)
T ss_pred chHHHHHHHHHhcCC--CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHH-HHHHHhhcccccccccccccc
Confidence 457888888887533 25799999999999999999999999999999998888777 6654332211 00010001
Q ss_pred ccccCCCCcc--------------------------cccccCcceEEEcccccCChhhhh---------cCCCccccccc
Q 042918 78 MIQLAPTMAT--------------------------IHSTKLGEWMLCKSKYDLEPGALA---------LIPELLPLGQL 122 (285)
Q Consensus 78 ~~~~~pg~~~--------------------------~~~~~~~~~vlvns~~~le~~~~~---------~~~~v~~VGpl 122 (285)
.+..+||+|. ...+.+++++++|||++||+.+.+ ..+++++|||+
T Consensus 164 ~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl 243 (448)
T PLN02562 164 KICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPL 243 (448)
T ss_pred ccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCc
Confidence 1112233321 122346789999999999996554 24689999999
Q ss_pred ccccCC--------CCCCC--CCCC----CCCceeeeeec----CccceE-------------EEEEcCCCCCCCCcccc
Q 042918 123 LASNRL--------GNSAG--FFWP----EDSTLFSTESY----SRNRFN-------------LWAVRPDMTDNSNDDAY 171 (285)
Q Consensus 123 ~~~~~~--------~~~~~--~~~~----~~~~~~s~~~~----~~~q~~-------------lW~~~~~~~~~~~~~~l 171 (285)
+..... +.+.. .+++ ...+|++++++ +.+|+. ||+++.+ ... .+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~----~~~-~l 318 (448)
T PLN02562 244 HNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV----WRE-GL 318 (448)
T ss_pred ccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC----chh-hC
Confidence 874310 11111 1221 12367776653 333332 9999864 122 58
Q ss_pred ccCccccccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 172 QKGFQDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 172 p~~f~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
|++|++|+++|++|++|+||.+||+||+|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++.
T Consensus 319 ~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-- 396 (448)
T PLN02562 319 PPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-- 396 (448)
T ss_pred CHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999987789999985
Q ss_pred CCCCccHHHHHHHHHHHHHHHHhhccC
Q 042918 252 KMGSSQGKKLTTRWIKCSVMKILKHVP 278 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~~~~~~~~~~ 278 (285)
+ +++++|+++|++++.++.|++.+
T Consensus 397 ~---~~~~~l~~~v~~~l~~~~~r~~a 420 (448)
T PLN02562 397 G---FGQKEVEEGLRKVMEDSGMGERL 420 (448)
T ss_pred C---CCHHHHHHHHHHHhCCHHHHHHH
Confidence 2 78999999999976556666543
No 10
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=3.7e-50 Score=374.49 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=180.9
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHH-hhccCCccccc-c-ccccCCCC---cc-----
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFI-SLFISGTAIKK-H-MIQLAPTM---AT----- 87 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~-~-~~~~~pg~---~~----- 87 (285)
++||||+| +++|+.++|+++|||+++|++++++.+. +. |++.-. ....++++... . ....+|.+ ..
T Consensus 107 ~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~-~~~~~~~~~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~ 183 (442)
T PLN02208 107 RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HT-HVPGGKLGVPPPGYPSSKVLFRENDAHALATLSIFYKRL 183 (442)
T ss_pred CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HH-ccCccccCCCCCCCCCcccccCHHHcCcccccchHHHHH
Confidence 58999999 6899999999999999999999998765 44 443210 00012333100 0 00011111 00
Q ss_pred c----ccccCcceEEEcccccCChhhhhcC-----CCcccccccccccC----CCCCCCCCCC----CCCceeeeeec--
Q 042918 88 I----HSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNR----LGNSAGFFWP----EDSTLFSTESY-- 148 (285)
Q Consensus 88 ~----~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~----~~~~~~~~~~----~~~~~~s~~~~-- 148 (285)
. ..+.+++++++|||++||+.+.+.+ +++++|||+++... ++.+...+++ ...+|+|+++.
T Consensus 184 ~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~ 263 (442)
T PLN02208 184 YHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQII 263 (442)
T ss_pred HHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEecccccc
Confidence 1 2345788999999999999877753 68999999987432 1111112222 23456775443
Q ss_pred -CccceE-------------EEEEcCCCCCCCCccccccCccccccccceee-eecChhhhcccCccceEEecCCchhHH
Q 042918 149 -SRNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTT 213 (285)
Q Consensus 149 -~~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~ 213 (285)
+.+|+. +|+++.+.......+.+|+||++|++++|+++ +|+||.+||+||+|++|||||||||++
T Consensus 264 l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~ 343 (442)
T PLN02208 264 LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIW 343 (442)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHH
Confidence 444433 88888542111111269999999999999888 999999999999999999999999999
Q ss_pred HhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 214 EGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 214 Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
||+++|||||+||+++||+.||+++++.||+|++++.++++.+++++|+++|++++.
T Consensus 344 Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~ 400 (442)
T PLN02208 344 ESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMD 400 (442)
T ss_pred HHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhc
Confidence 999999999999999999999999887799999998654457999999999999653
No 11
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.5e-49 Score=370.69 Aligned_cols=270 Identities=19% Similarity=0.342 Sum_probs=193.2
Q ss_pred CchHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhh--ccCCccc-ccc
Q 042918 1 MRGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISL--FISGTAI-KKH 77 (285)
Q Consensus 1 ~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~-~~~ 77 (285)
+.++|+++++++.+.+ .+++|||+|.+++|+.++|+++|||++.|++++++.+++++ +++..... ..++++. +..
T Consensus 89 ~~~~l~~~l~~l~~~~-~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~-~~~~~~~~~~~iPglp~l~~~ 166 (455)
T PLN02152 89 GDKALSDFIEANLNGD-SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYY-NYSTGNNSVFEFPNLPSLEIR 166 (455)
T ss_pred ccHHHHHHHHHhhccC-CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHH-HhhccCCCeeecCCCCCCchH
Confidence 3568899998875333 35799999999999999999999999999999999988877 54321110 0122221 000
Q ss_pred cc-ccC-C---C---Ccc----ccccc--CcceEEEcccccCChhhhhcCC--Cccccccccccc----CC-CC-----C
Q 042918 78 MI-QLA-P---T---MAT----IHSTK--LGEWMLCKSKYDLEPGALALIP--ELLPLGQLLASN----RL-GN-----S 131 (285)
Q Consensus 78 ~~-~~~-p---g---~~~----~~~~~--~~~~vlvns~~~le~~~~~~~~--~v~~VGpl~~~~----~~-~~-----~ 131 (285)
.+ .++ + . ... .+.+. .++++|+|||++||+.+.+.+. ++|+||||++.. .. +. +
T Consensus 167 dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~ 246 (455)
T PLN02152 167 DLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNIEMVAVGPLLPAEIFTGSESGKDLSVRD 246 (455)
T ss_pred HCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcCCEEEEcccCccccccccccCccccccc
Confidence 00 000 0 0 000 11122 2469999999999999888773 699999998531 00 00 0
Q ss_pred -C--CCCC-C----CCCceeeee---ecCccceE-------------EEEEcCCCCC-----CC-Cc-cccccCcccccc
Q 042918 132 -A--GFFW-P----EDSTLFSTE---SYSRNRFN-------------LWAVRPDMTD-----NS-ND-DAYQKGFQDGVG 180 (285)
Q Consensus 132 -~--~~~~-~----~~~~~~s~~---~~~~~q~~-------------lW~~~~~~~~-----~~-~~-~~lp~~f~~~~~ 180 (285)
. ..-| + ...+|++++ .++.+|+. ||+++++... .+ .. ..+|++|+||++
T Consensus 247 ~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~ 326 (455)
T PLN02152 247 QSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELE 326 (455)
T ss_pred cchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhcc
Confidence 0 0112 1 134566655 44445543 9999864210 01 11 025789999999
Q ss_pred ccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHH
Q 042918 181 TRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKK 260 (285)
Q Consensus 181 ~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~ 260 (285)
+||+|++|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++++.+++++
T Consensus 327 ~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~ 406 (455)
T PLN02152 327 EVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGE 406 (455)
T ss_pred CCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888999998754445689999
Q ss_pred HHHHHHHHHHHH
Q 042918 261 LTTRWIKCSVMK 272 (285)
Q Consensus 261 l~~ai~~~~~~~ 272 (285)
|+++|++++.++
T Consensus 407 l~~av~~vm~~~ 418 (455)
T PLN02152 407 IRRCLEAVMEEK 418 (455)
T ss_pred HHHHHHHHHhhh
Confidence 999999976533
No 12
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=375.14 Aligned_cols=264 Identities=19% Similarity=0.300 Sum_probs=191.7
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccccccccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQL 81 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (285)
.++|+++++++. .+++|||+|.|++|+.++|+++|||+++|++++++.+++++ ++|.........+......+ .
T Consensus 97 ~~~l~~~L~~l~----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~ 170 (480)
T PLN00164 97 APHVRAAIAGLS----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALML-RLPALDEEVAVEFEEMEGAV-D 170 (480)
T ss_pred hHHHHHHHHhcC----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHh-hhhhhcccccCcccccCcce-e
Confidence 457778887762 35799999999999999999999999999999999998888 76643211000000000000 1
Q ss_pred CCCCcc------------------------cccccCcceEEEcccccCChhhhhcC-----------CCccccccccccc
Q 042918 82 APTMAT------------------------IHSTKLGEWMLCKSKYDLEPGALALI-----------PELLPLGQLLASN 126 (285)
Q Consensus 82 ~pg~~~------------------------~~~~~~~~~vlvns~~~le~~~~~~~-----------~~v~~VGpl~~~~ 126 (285)
+||+|. .+.+.+++++|+|||++||+.+.+.+ ++++.|||++...
T Consensus 171 iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~ 250 (480)
T PLN00164 171 VPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLA 250 (480)
T ss_pred cCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCcccc
Confidence 222211 12245788999999999999877654 4799999998531
Q ss_pred C--C--CCC--CCCCCC----CCCceeeeee---cCccceE-------------EEEEcCCCCC-------CCCcccccc
Q 042918 127 R--L--GNS--AGFFWP----EDSTLFSTES---YSRNRFN-------------LWAVRPDMTD-------NSNDDAYQK 173 (285)
Q Consensus 127 ~--~--~~~--~~~~~~----~~~~~~s~~~---~~~~q~~-------------lW~~~~~~~~-------~~~~~~lp~ 173 (285)
. . ..+ ...+++ ....|+++++ ++.+|+. ||+++.+... .+..+.+|+
T Consensus 251 ~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~ 330 (480)
T PLN00164 251 FTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPE 330 (480)
T ss_pred ccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCCh
Confidence 1 1 111 011111 1235667554 3444433 9999964211 011124899
Q ss_pred Cccccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC
Q 042918 174 GFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK 252 (285)
Q Consensus 174 ~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~ 252 (285)
||++|++++|+++ +|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++
T Consensus 331 ~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 331 GFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred HHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 9999999999988 999999999999999999999999999999999999999999999999999877799999996431
Q ss_pred --CCCccHHHHHHHHHHHHHH
Q 042918 253 --MGSSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 253 --~~~~~~~~l~~ai~~~~~~ 271 (285)
++.+++++|+++|++++.+
T Consensus 411 ~~~~~~~~e~l~~av~~vm~~ 431 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLMGG 431 (480)
T ss_pred ccCCcCcHHHHHHHHHHHhcC
Confidence 2468999999999996543
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.5e-49 Score=374.72 Aligned_cols=267 Identities=19% Similarity=0.318 Sum_probs=191.4
Q ss_pred chHHHHHHHHhhh----cCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccc--
Q 042918 2 RGKLEELIEEINR----QEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIK-- 75 (285)
Q Consensus 2 ~~~~~~ll~~l~~----~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-- 75 (285)
..+++++++++.. ++..+++|||+|.|++|+.++|+++|||+++|++++++.+++++ ++|.........++..
T Consensus 97 ~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~-~~~~~~~~~~~~~~~~~~ 175 (475)
T PLN02167 97 VPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMK-YLPERHRKTASEFDLSSG 175 (475)
T ss_pred HHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHH-HHHHhccccccccccCCC
Confidence 3567777776532 11124699999999999999999999999999999998888877 6654211100000000
Q ss_pred ccccccCCCCc---------c--------------cccccCcceEEEcccccCChhhhhcC-------CCcccccccccc
Q 042918 76 KHMIQLAPTMA---------T--------------IHSTKLGEWMLCKSKYDLEPGALALI-------PELLPLGQLLAS 125 (285)
Q Consensus 76 ~~~~~~~pg~~---------~--------------~~~~~~~~~vlvns~~~le~~~~~~~-------~~v~~VGpl~~~ 125 (285)
+..+ .+||++ . +..+.+++++|+|||++||+.+.+.+ |++++|||+++.
T Consensus 176 ~~~~-~iPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~ 254 (475)
T PLN02167 176 EEEL-PIPGFVNSVPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSL 254 (475)
T ss_pred CCee-ECCCCCCCCChhhCchhhhCcchHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEecccccc
Confidence 0111 134431 0 12245788999999999999877643 689999999863
Q ss_pred cC-----CCC-C---CCCCCC----CCCceeeeeec---CccceE-------------EEEEcCCCCC-CCCccccccCc
Q 042918 126 NR-----LGN-S---AGFFWP----EDSTLFSTESY---SRNRFN-------------LWAVRPDMTD-NSNDDAYQKGF 175 (285)
Q Consensus 126 ~~-----~~~-~---~~~~~~----~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~-~~~~~~lp~~f 175 (285)
.. ++. + ...+++ ....|++++++ +.+|+. ||+++.+... ......+|+||
T Consensus 255 ~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~ 334 (475)
T PLN02167 255 KDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGF 334 (475)
T ss_pred ccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHH
Confidence 21 111 0 111111 12456675544 344433 9999864211 01112589999
Q ss_pred cccccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC---C
Q 042918 176 QDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT---K 252 (285)
Q Consensus 176 ~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~---~ 252 (285)
+||+++||++++|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+... +
T Consensus 335 ~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 414 (475)
T PLN02167 335 MDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSA 414 (475)
T ss_pred HHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998866669999999753 1
Q ss_pred -CCCccHHHHHHHHHHHHH
Q 042918 253 -MGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 253 -~~~~~~~~l~~ai~~~~~ 270 (285)
++.+++++|+++|++++.
T Consensus 415 ~~~~~~~~~l~~av~~~m~ 433 (475)
T PLN02167 415 YGEIVKADEIAGAVRSLMD 433 (475)
T ss_pred cCCcccHHHHHHHHHHHhc
Confidence 235799999999999654
No 14
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=7.3e-49 Score=364.84 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=189.0
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhH-HHhhccCCccc-----c
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMK-FISLFISGTAI-----K 75 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~-----~ 75 (285)
+++|+++++++ ++||||+|+ ++|+.++|+++|||++.|++++++.++++. + +. ......++++. +
T Consensus 97 ~~~~~~~l~~~------~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~-~-~~~~~~~~~pglp~~~v~l~ 167 (453)
T PLN02764 97 RDQVEVVVRAV------EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASML-V-PGGELGVPPPGYPSSKVLLR 167 (453)
T ss_pred HHHHHHHHHhC------CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHh-c-ccccCCCCCCCCCCCcccCc
Confidence 35677777654 479999995 899999999999999999999998887765 3 21 00000123331 0
Q ss_pred ccc---c-ccCCCCc-----c----c-ccccCcceEEEcccccCChhhhhcC-----CCcccccccccccCCCCCC---C
Q 042918 76 KHM---I-QLAPTMA-----T----I-HSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNRLGNSA---G 133 (285)
Q Consensus 76 ~~~---~-~~~pg~~-----~----~-~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~~~~~~---~ 133 (285)
... . ...+..+ . + ..+.+++++|+|||++||+.+.+++ +++++|||+++......+. .
T Consensus 168 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~c 247 (453)
T PLN02764 168 KQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERW 247 (453)
T ss_pred HhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHH
Confidence 000 0 0001111 0 1 3345788999999999999988765 4699999997632111111 1
Q ss_pred CCC-----CCCCceeeeeec---CccceE-------------EEEEcCCCCCCCCccccccCccccccccceee-eecCh
Q 042918 134 FFW-----PEDSTLFSTESY---SRNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMV-GCTPQ 191 (285)
Q Consensus 134 ~~~-----~~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~-~w~PQ 191 (285)
..| +....|++++++ +.+|+. +|++|++....+....+|+||++|++++|+++ +|+||
T Consensus 248 l~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ 327 (453)
T PLN02764 248 VKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQ 327 (453)
T ss_pred HHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCH
Confidence 123 123456775554 556654 99999642211112269999999999999988 99999
Q ss_pred hhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHHH
Q 042918 192 QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 192 ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~~ 271 (285)
.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++.+.+++++|+++|++++.+
T Consensus 328 ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~ 407 (453)
T PLN02764 328 PLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKR 407 (453)
T ss_pred HHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999877999999865422468999999999996543
No 15
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.7e-49 Score=369.78 Aligned_cols=274 Identities=18% Similarity=0.315 Sum_probs=193.0
Q ss_pred hHHHHHHHHhhhc----CCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhc-cC--Ccccc
Q 042918 3 GKLEELIEEINRQ----EDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLF-IS--GTAIK 75 (285)
Q Consensus 3 ~~~~~ll~~l~~~----~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~-~~--~~~~~ 75 (285)
.++++.++++..+ .+++++|||+|.|++|+.++|+++|||++.|++++++.+++++ |+|.....+ .+ ++...
T Consensus 92 ~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (481)
T PLN02554 92 PKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQL-HVQMLYDEKKYDVSELEDS 170 (481)
T ss_pred HHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHH-hhhhhccccccCccccCCC
Confidence 4566666665321 1124589999999999999999999999999999999999888 776543211 10 11110
Q ss_pred ccccccCCCCc---------c--------------cccccCcceEEEcccccCChhhhhc-------CCCccccccccc-
Q 042918 76 KHMIQLAPTMA---------T--------------IHSTKLGEWMLCKSKYDLEPGALAL-------IPELLPLGQLLA- 124 (285)
Q Consensus 76 ~~~~~~~pg~~---------~--------------~~~~~~~~~vlvns~~~le~~~~~~-------~~~v~~VGpl~~- 124 (285)
...+ .+||++ + ...+.+++++++|||++||..+... .+++++|||++.
T Consensus 171 ~~~v-~iPgl~~pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~ 249 (481)
T PLN02554 171 EVEL-DVPSLTRPYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHL 249 (481)
T ss_pred Ccee-ECCCCCCCCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccc
Confidence 0111 234431 1 1224578899999999999976653 368999999943
Q ss_pred ccCCC---CC----CCCCCC----CCCceeeeeec---CccceE-------------EEEEcCCCCC---------CCCc
Q 042918 125 SNRLG---NS----AGFFWP----EDSTLFSTESY---SRNRFN-------------LWAVRPDMTD---------NSND 168 (285)
Q Consensus 125 ~~~~~---~~----~~~~~~----~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~---------~~~~ 168 (285)
..+.. .+ ...+++ ....|++++++ +.+|+. ||+++.+... ....
T Consensus 250 ~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN02554 250 ENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLE 329 (481)
T ss_pred cccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchh
Confidence 22100 11 111121 12356776554 333432 9999863210 0111
Q ss_pred cccccCccccccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEe
Q 042918 169 DAYQKGFQDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRF 248 (285)
Q Consensus 169 ~~lp~~f~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l 248 (285)
+.+|+||++|+++||++++|+||.+||+||++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+
T Consensus 330 ~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l 409 (481)
T PLN02554 330 EILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEI 409 (481)
T ss_pred hhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEe
Confidence 14799999999999999999999999999999999999999999999999999999999999999997755569999999
Q ss_pred ecC--------CCCCccHHHHHHHHHHHHH-HHHhhccC
Q 042918 249 NKT--------KMGSSQGKKLTTRWIKCSV-MKILKHVP 278 (285)
Q Consensus 249 ~~~--------~~~~~~~~~l~~ai~~~~~-~~~~~~~~ 278 (285)
++. +.+.+++++|+++|++++. ++.|++.+
T Consensus 410 ~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a 448 (481)
T PLN02554 410 RKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRV 448 (481)
T ss_pred eccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHH
Confidence 741 1246899999999999654 34555443
No 16
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-48 Score=364.33 Aligned_cols=247 Identities=21% Similarity=0.304 Sum_probs=182.4
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhc--cCCcccc-----ccccccCCC-C----c
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLF--ISGTAIK-----KHMIQLAPT-M----A 86 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~-----~~~~~~~pg-~----~ 86 (285)
++||||+|. ++|+.++|+++|||++.|++++++.++++. + +.. ..+ .++++.. ..... .+. + .
T Consensus 107 ~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~-~-~~~-~~~~~~pg~p~~~~~~~~~~~~-~~~~~~~~~~ 181 (446)
T PLN00414 107 KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVL-A-PRA-ELGFPPPDYPLSKVALRGHDAN-VCSLFANSHE 181 (446)
T ss_pred CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHh-C-cHh-hcCCCCCCCCCCcCcCchhhcc-cchhhcccHH
Confidence 589999995 899999999999999999999998888776 5 221 111 1223210 00000 000 1 0
Q ss_pred c----cccccCcceEEEcccccCChhhhhcC-----CCcccccccccccCC--CCC---CCCCCC-----CCCceeeeee
Q 042918 87 T----IHSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNRL--GNS---AGFFWP-----EDSTLFSTES 147 (285)
Q Consensus 87 ~----~~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~~--~~~---~~~~~~-----~~~~~~s~~~ 147 (285)
. .+.+.+++++|+|||++||+.+.+.+ +++++|||+++.... ... ...-|. ....|+++++
T Consensus 182 ~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS 261 (446)
T PLN00414 182 LFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGT 261 (446)
T ss_pred HHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecc
Confidence 0 13345788999999999999888754 369999999753211 110 011231 2335666554
Q ss_pred c---CccceE-------------EEEEcCCCCCCCCccccccCccccccccceee-eecChhhhcccCccceEEecCCch
Q 042918 148 Y---SRNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWN 210 (285)
Q Consensus 148 ~---~~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~n 210 (285)
+ +.+|+. ||+++++...++..+.+|+||++|++++|+|+ +|+||.+||+|++|++||||||||
T Consensus 262 ~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~n 341 (446)
T PLN00414 262 QFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFG 341 (446)
T ss_pred cccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchh
Confidence 3 445543 99999742211212269999999999999998 999999999999999999999999
Q ss_pred hHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 211 PTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 211 S~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
|++||+++|||||+||+++||+.||+++++.||+|+++..++++.+++++|++++++++.
T Consensus 342 S~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~ 401 (446)
T PLN00414 342 SMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMD 401 (446)
T ss_pred HHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhc
Confidence 999999999999999999999999999987799999997643356999999999999654
No 17
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.2e-48 Score=367.50 Aligned_cols=261 Identities=21% Similarity=0.401 Sum_probs=188.1
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCccccccc--c
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHM--I 79 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~ 79 (285)
.++++++++++. .+++|||+|.+++|+.++|+++|||+++|++++++.+++++ +++........ ....... +
T Consensus 101 ~~~~~~~l~~~~----~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 174 (477)
T PLN02863 101 YAPLLSWFRSHP----SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMY-SLWREMPTKIN-PDDQNEILSF 174 (477)
T ss_pred HHHHHHHHHhCC----CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHH-HHhhccccccc-cccccccccc
Confidence 355666666532 36899999999999999999999999999999999998887 65421110000 0000000 1
Q ss_pred ccCCCCcc--------------------------cccccCcceEEEcccccCChhhhhcC------CCcccccccccccC
Q 042918 80 QLAPTMAT--------------------------IHSTKLGEWMLCKSKYDLEPGALALI------PELLPLGQLLASNR 127 (285)
Q Consensus 80 ~~~pg~~~--------------------------~~~~~~~~~vlvns~~~le~~~~~~~------~~v~~VGpl~~~~~ 127 (285)
..+||++. +.....++++++|||++||+.+.+.+ +++++||||++...
T Consensus 175 ~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~ 254 (477)
T PLN02863 175 SKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSG 254 (477)
T ss_pred CCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCccccc
Confidence 12333321 11122467899999999999987754 57999999985321
Q ss_pred CC-------CCC------CCCC-C----CCCceeeeeec---CccceE-------------EEEEcCCCCCC-CCccccc
Q 042918 128 LG-------NSA------GFFW-P----EDSTLFSTESY---SRNRFN-------------LWAVRPDMTDN-SNDDAYQ 172 (285)
Q Consensus 128 ~~-------~~~------~~~~-~----~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~~-~~~~~lp 172 (285)
.. .+. ..-| + ...+|++++++ +.+|+. ||+++++.... ... .+|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~-~lp 333 (477)
T PLN02863 255 EKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYS-NIP 333 (477)
T ss_pred ccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchh-hCC
Confidence 00 000 0012 1 12356775544 344443 99998642211 122 589
Q ss_pred cCccccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 173 KGFQDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 173 ~~f~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
++|++|++++|+++ +|+||.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++..+
T Consensus 334 ~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~ 413 (477)
T PLN02863 334 SGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG 413 (477)
T ss_pred HHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC
Confidence 99999999999877 99999999999999999999999999999999999999999999999999988779999999654
Q ss_pred CCCCccHHHHHHHHHHHH
Q 042918 252 KMGSSQGKKLTTRWIKCS 269 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~ 269 (285)
+.+.+++++++++|++.+
T Consensus 414 ~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 414 ADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCcCHHHHHHHHHHHh
Confidence 335679999999999854
No 18
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=8.9e-48 Score=360.31 Aligned_cols=251 Identities=20% Similarity=0.386 Sum_probs=180.0
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCccccccccccCCCCc------------
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQLAPTMA------------ 86 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~------------ 86 (285)
++||||+|.+++|+.++|+++|||++.|+++++..+.++. +++.... .......... ...+||+|
T Consensus 103 ~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~Pgl~~~~~~dl~~~~~ 179 (456)
T PLN02210 103 RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYY-RYYMKTN-SFPDLEDLNQ-TVELPALPLLEVRDLPSFML 179 (456)
T ss_pred CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHH-hhhhccC-CCCcccccCC-eeeCCCCCCCChhhCChhhh
Confidence 6999999999999999999999999999999998888766 5432100 0000000000 00112221
Q ss_pred --------c----c-ccccCcceEEEcccccCChhhhhcC---CCccccccccccc-----CCC--C----CC------C
Q 042918 87 --------T----I-HSTKLGEWMLCKSKYDLEPGALALI---PELLPLGQLLASN-----RLG--N----SA------G 133 (285)
Q Consensus 87 --------~----~-~~~~~~~~vlvns~~~le~~~~~~~---~~v~~VGpl~~~~-----~~~--~----~~------~ 133 (285)
. + .....++++++|||++||+++.+.+ +++++|||+++.. ... . .+ .
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (456)
T PLN02210 180 PSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCC 259 (456)
T ss_pred cCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcCcccccccccccccccccchHH
Confidence 0 1 1234678999999999999988774 5799999998521 100 0 00 0
Q ss_pred CCC-C----CCCceeeeeec---CccceE-------------EEEEcCCCCCCCCccccccCccccc-cccceeeeecCh
Q 042918 134 FFW-P----EDSTLFSTESY---SRNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGV-GTRGQMVGCTPQ 191 (285)
Q Consensus 134 ~~~-~----~~~~~~s~~~~---~~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~-~~~~~v~~w~PQ 191 (285)
..| + ....|++++++ +.+|+. ||+++.+. .. ..+.+|.+++ ++||+|++|+||
T Consensus 260 ~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~----~~-~~~~~~~~~~~~~~g~v~~w~PQ 334 (456)
T PLN02210 260 MEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKE----KA-QNVQVLQEMVKEGQGVVLEWSPQ 334 (456)
T ss_pred HHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCc----cc-cchhhHHhhccCCCeEEEecCCH
Confidence 112 1 12356665554 333332 99998641 11 2446677888 489999999999
Q ss_pred hhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC-CCCccHHHHHHHHHHHHH
Q 042918 192 QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK-MGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 192 ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~-~~~~~~~~l~~ai~~~~~ 270 (285)
.+||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.||+|+++...+ ++.+++++|+++|++++.
T Consensus 335 ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~ 414 (456)
T PLN02210 335 EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTE 414 (456)
T ss_pred HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999998789999997532 357999999999999765
Q ss_pred HHHhhcc
Q 042918 271 MKILKHV 277 (285)
Q Consensus 271 ~~~~~~~ 277 (285)
+++.+++
T Consensus 415 ~~~g~~~ 421 (456)
T PLN02210 415 GPAAADI 421 (456)
T ss_pred CchHHHH
Confidence 5543333
No 19
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.5e-47 Score=359.97 Aligned_cols=261 Identities=23% Similarity=0.446 Sum_probs=182.3
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCcccccccccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQL 81 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (285)
+.+|+++|++. + .+++|||+|.|++|+.++|+++|||+++|++++++.+..++ ++....... ..+..... ..
T Consensus 106 ~~~l~~lL~~~---~-~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~-~~~~~~~~~--~~~~~~~~-~~ 177 (491)
T PLN02534 106 QQPLERFLEQA---K-PPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSH-NIRLHNAHL--SVSSDSEP-FV 177 (491)
T ss_pred HHHHHHHHHhc---C-CCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHH-HHHHhcccc--cCCCCCce-ee
Confidence 35566666543 1 36899999999999999999999999999999998877654 321111000 00000000 01
Q ss_pred CCCCc-----------c--------------cccc-cCcceEEEcccccCChhhhhcC-----CCcccccccccccCC--
Q 042918 82 APTMA-----------T--------------IHST-KLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNRL-- 128 (285)
Q Consensus 82 ~pg~~-----------~--------------~~~~-~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~~-- 128 (285)
+||+| . +... .+++++|+|||++||+.+.+.+ +++++||||+.....
T Consensus 178 iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~ 257 (491)
T PLN02534 178 VPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNL 257 (491)
T ss_pred cCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccc
Confidence 22221 0 1111 2467999999999999877654 579999999753110
Q ss_pred -----C--C--CC--CCCC-C----CCCceeeeee---cCccceE-------------EEEEcCCCCCCCCcc-ccccCc
Q 042918 129 -----G--N--SA--GFFW-P----EDSTLFSTES---YSRNRFN-------------LWAVRPDMTDNSNDD-AYQKGF 175 (285)
Q Consensus 129 -----~--~--~~--~~~~-~----~~~~~~s~~~---~~~~q~~-------------lW~~~~~~~~~~~~~-~lp~~f 175 (285)
+ . +. ...| + ...+|+++++ ++.+|+. ||+++++....+..+ .+|++|
T Consensus 258 ~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf 337 (491)
T PLN02534 258 DKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENF 337 (491)
T ss_pred cccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhh
Confidence 0 0 00 0112 1 2334566443 3334433 999995321111111 368999
Q ss_pred cccccccceee-eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC---
Q 042918 176 QDGVGTRGQMV-GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT--- 251 (285)
Q Consensus 176 ~~~~~~~~~v~-~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~--- 251 (285)
.++++++|+++ +|+||.+||+|++|+||||||||||++||+++|||||+||+++||+.||+++++.||+|+++...
T Consensus 338 ~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~ 417 (491)
T PLN02534 338 EERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPV 417 (491)
T ss_pred HHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccc
Confidence 99998888877 99999999999999999999999999999999999999999999999999999999999998521
Q ss_pred ----CC--C-CccHHHHHHHHHHHHH
Q 042918 252 ----KM--G-SSQGKKLTTRWIKCSV 270 (285)
Q Consensus 252 ----~~--~-~~~~~~l~~ai~~~~~ 270 (285)
++ + .+++++|+++|+++|.
T Consensus 418 ~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 418 RWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccccccccCccCHHHHHHHHHHHhc
Confidence 11 2 5899999999999654
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=4.6e-47 Score=358.68 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=178.7
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCccccccccccCCCCc------------
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAIKKHMIQLAPTMA------------ 86 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~------------ 86 (285)
++||||+|.+++|+.++|+++|||+++|++++++....++ ++........ .......+ .+||+|
T Consensus 122 ~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~-~~~~~~~~~~--~~~~~~~~-~~pg~p~~~~~~~~~~~~ 197 (482)
T PLN03007 122 RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY-CIRVHKPQKK--VASSSEPF-VIPDLPGDIVITEEQIND 197 (482)
T ss_pred CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH-HHHhcccccc--cCCCCcee-eCCCCCCccccCHHhcCC
Confidence 6899999999999999999999999999999987766554 2211110000 00000000 022221
Q ss_pred --c-----------cccccCcceEEEcccccCChhhhhcC-----CCcccccccccccCC-------C--C-----CCCC
Q 042918 87 --T-----------IHSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNRL-------G--N-----SAGF 134 (285)
Q Consensus 87 --~-----------~~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~~-------~--~-----~~~~ 134 (285)
. ...+.+++++++|||++||+++++.+ .++++|||+...... + . +...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (482)
T PLN03007 198 ADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLK 277 (482)
T ss_pred CCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHH
Confidence 0 12345788999999999999877765 369999998753210 1 0 0011
Q ss_pred CCC----CCCceeeeeecC---ccceE-------------EEEEcCCCCCCCCccccccCccccccccceee-eecChhh
Q 042918 135 FWP----EDSTLFSTESYS---RNRFN-------------LWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMV-GCTPQQK 193 (285)
Q Consensus 135 ~~~----~~~~~~s~~~~~---~~q~~-------------lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~-~w~PQ~~ 193 (285)
+++ ...+|++++++. .+|+. ||+++++....+....+|++|++|++++++++ +|+||.+
T Consensus 278 wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~ 357 (482)
T PLN03007 278 WLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVL 357 (482)
T ss_pred HHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHH
Confidence 111 224577765543 23332 99999752211111258999999999888876 9999999
Q ss_pred hcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC-----CCCCccHHHHHHHHHHH
Q 042918 194 FLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT-----KMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 194 iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~-----~~~~~~~~~l~~ai~~~ 268 (285)
||+|++|++|||||||||++||+++|||||+||+++||+.||+++++.|++|+.+... +...+++++|+++|+++
T Consensus 358 iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~ 437 (482)
T PLN03007 358 ILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREV 437 (482)
T ss_pred HhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998878998887522 22458999999999997
Q ss_pred HHHH
Q 042918 269 SVMK 272 (285)
Q Consensus 269 ~~~~ 272 (285)
+.++
T Consensus 438 m~~~ 441 (482)
T PLN03007 438 IVGE 441 (482)
T ss_pred hcCc
Confidence 6555
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.5e-44 Score=339.88 Aligned_cols=265 Identities=20% Similarity=0.317 Sum_probs=186.1
Q ss_pred chHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhhHHHhhccCCccc---cccc
Q 042918 2 RGKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLMKFISLFISGTAI---KKHM 78 (285)
Q Consensus 2 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~ 78 (285)
.++++++++++. .++||||+|.+++|+.++|+++|||++.|+++++..++.+. +++.+...+...... .+..
T Consensus 95 ~~~~~~~l~~~~----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (459)
T PLN02448 95 EAPFEQLLDRLE----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFY-HFDLLPQNGHFPVELSESGEER 169 (459)
T ss_pred HHHHHHHHHhcC----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHH-HhhhhhhccCCCCccccccCCc
Confidence 356677777653 26899999999999999999999999999999998887777 665433221100000 0010
Q ss_pred cccCCCCcc------------------------cccccCcceEEEcccccCChhhhhcC-----CCcccccccccccCC-
Q 042918 79 IQLAPTMAT------------------------IHSTKLGEWMLCKSKYDLEPGALALI-----PELLPLGQLLASNRL- 128 (285)
Q Consensus 79 ~~~~pg~~~------------------------~~~~~~~~~vlvns~~~le~~~~~~~-----~~v~~VGpl~~~~~~- 128 (285)
+..+||++. +..+.+++.+++|||++||+.+.+.+ +++++|||+.+....
T Consensus 170 ~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~ 249 (459)
T PLN02448 170 VDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELK 249 (459)
T ss_pred cccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccC
Confidence 112333221 12234667999999999999866653 378999999763111
Q ss_pred ------CC-----CCCCCCC----CCCceeeeeecC---ccce-------------EEEEEcCCCCCCCCccccccCccc
Q 042918 129 ------GN-----SAGFFWP----EDSTLFSTESYS---RNRF-------------NLWAVRPDMTDNSNDDAYQKGFQD 177 (285)
Q Consensus 129 ------~~-----~~~~~~~----~~~~~~s~~~~~---~~q~-------------~lW~~~~~~~~~~~~~~lp~~f~~ 177 (285)
+. +...++. ...+|++++++. .+|+ .||+++.+ ..+|.+
T Consensus 250 ~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----------~~~~~~ 319 (459)
T PLN02448 250 DNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE----------ASRLKE 319 (459)
T ss_pred CCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc----------hhhHhH
Confidence 00 0001111 124577755442 2332 29998753 124555
Q ss_pred cccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC--CCCC
Q 042918 178 GVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT--KMGS 255 (285)
Q Consensus 178 ~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~--~~~~ 255 (285)
+.++|++|++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+... +++.
T Consensus 320 ~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 320 ICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred hccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 56678899999999999999999999999999999999999999999999999999999999889999999742 2246
Q ss_pred ccHHHHHHHHHHHHHH--HHhhccCccc
Q 042918 256 SQGKKLTTRWIKCSVM--KILKHVPWNS 281 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~--~~~~~~~~~~ 281 (285)
+++++|+++|++++.+ ++.|+...|+
T Consensus 400 ~~~~~l~~av~~vl~~~~~~~~~~r~~a 427 (459)
T PLN02448 400 VGREEIAELVKRFMDLESEEGKEMRRRA 427 (459)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 8999999999996643 2344444443
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=3.6e-41 Score=321.05 Aligned_cols=243 Identities=18% Similarity=0.176 Sum_probs=157.2
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHH--HH-h-----hhhhHHHhhc--cCCcccccc-----------
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTG--LL-L-----NQLMKFISLF--ISGTAIKKH----------- 77 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~--~~-~-----~~~p~~~~~~--~~~~~~~~~----------- 77 (285)
+||++|+|.+.+|+..+|+.+|+|.+.+.++...... .. . ++.|....+- ...+.+|..
T Consensus 119 ~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~ 198 (500)
T PF00201_consen 119 KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFI 198 (500)
T ss_dssp HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHH
T ss_pred ccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccc
Confidence 6999999999999999999999999876543221110 00 0 1223211100 001111110
Q ss_pred ----------ccccCCCCc--ccccccCcceEEEcccccCChhhhhcCCCccccccccccc--CCCCCCCCCCCC----C
Q 042918 78 ----------MIQLAPTMA--TIHSTKLGEWMLCKSKYDLEPGALALIPELLPLGQLLASN--RLGNSAGFFWPE----D 139 (285)
Q Consensus 78 ----------~~~~~pg~~--~~~~~~~~~~vlvns~~~le~~~~~~~~~v~~VGpl~~~~--~~~~~~~~~~~~----~ 139 (285)
......+.+ ..+.+.+++++++|+.+.+|++ ++.+|++++|||++... +++.+...+.++ +
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-rp~~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~ 277 (500)
T PF00201_consen 199 FRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-RPLLPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKG 277 (500)
T ss_dssp HHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE-----HHHHCTSTTGCGC-S----TCHHHHHHHTSTTTTTE
T ss_pred cccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-cchhhcccccCccccccccccccccchhhhccCCCC
Confidence 000001111 1233457889999999999997 99999999999998753 333222222222 2
Q ss_pred CceeeeeecCc-----------------cceEEEEEcCCCCCCCCccccccCccccccccceeeeecChhhhcccCccce
Q 042918 140 STLFSTESYSR-----------------NRFNLWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMVGCTPQQKFLSHPSIAC 202 (285)
Q Consensus 140 ~~~~s~~~~~~-----------------~q~~lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~~w~PQ~~iL~h~~v~~ 202 (285)
.+++|++++-. +|..||++++. ... .+|+| .++++|+||.+||+||+|++
T Consensus 278 vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~----~~~-~l~~n--------~~~~~W~PQ~~lL~hp~v~~ 344 (500)
T PF00201_consen 278 VVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE----PPE-NLPKN--------VLIVKWLPQNDLLAHPRVKL 344 (500)
T ss_dssp EEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS----HGC-HHHTT--------EEEESS--HHHHHTSTTEEE
T ss_pred EEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc----ccc-cccce--------EEEeccccchhhhhccccee
Confidence 35677554321 23349999874 122 56665 48889999999999999999
Q ss_pred EEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHHHHHhhccCc
Q 042918 203 FLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSVMKILKHVPW 279 (285)
Q Consensus 203 fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~ 279 (285)
|||||||||++||+++|||||++|+|+||+.||+++++ .|+|+.+++++ ++.++|.+||++++.+++||+-|.
T Consensus 345 fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~vl~~~~y~~~a~ 417 (500)
T PF00201_consen 345 FITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE-KGVGVVLDKND---LTEEELRAAIREVLENPSYKENAK 417 (500)
T ss_dssp EEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH-TTSEEEEGGGC----SHHHHHHHHHHHHHSHHHHHHHH
T ss_pred eeeccccchhhhhhhccCCccCCCCcccCCccceEEEE-EeeEEEEEecC---CcHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999998 69999999875 999999999999988888887554
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=4.5e-37 Score=291.60 Aligned_cols=245 Identities=12% Similarity=0.111 Sum_probs=174.9
Q ss_pred CCccEEEeCCcchhHHHHHHHc-CCceEEEecchHHHH--HHHh------hhhhHHHhhcc--CCccccc----------
Q 042918 18 EKISCVIADGAMGWAMVAAEEM-KIRRAAYLACSSWTT--GLLL------NQLMKFISLFI--SGTAIKK---------- 76 (285)
Q Consensus 18 ~~~d~vI~D~~~~~~~~~A~~l-giP~i~~~~~~~~~~--~~~~------~~~p~~~~~~~--~~~~~~~---------- 76 (285)
.+||++|+|.+..|+..+|+++ ++|.|.+++...... .... +|+|....... .++.+|.
T Consensus 135 ~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~ 214 (507)
T PHA03392 135 NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLY 214 (507)
T ss_pred CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 4799999999989999999999 999888776543322 1111 23332211100 0111110
Q ss_pred -----------ccc-ccCC-CCcccccc-cCcceEEEcccccCChhhhhcCCCccccccccccc----CCCCCCCCCCCC
Q 042918 77 -----------HMI-QLAP-TMATIHST-KLGEWMLCKSKYDLEPGALALIPELLPLGQLLASN----RLGNSAGFFWPE 138 (285)
Q Consensus 77 -----------~~~-~~~p-g~~~~~~~-~~~~~vlvns~~~le~~~~~~~~~v~~VGpl~~~~----~~~~~~~~~~~~ 138 (285)
+.. ..++ ..|...++ .+++++|+||.+.+|++ ++.+|++++|||++.+. +++.++..+.++
T Consensus 215 ~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~ 293 (507)
T PHA03392 215 NEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-RPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNN 293 (507)
T ss_pred HHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-CCCCCCeeeecccccCCCCCCCCCHHHHHHHhc
Confidence 001 1222 24555555 48899999999999997 89999999999998742 233333333322
Q ss_pred ---CCceeeeeecC------c-------------cceEEEEEcCCCCCCCCccccccCccccccccceeeeecChhhhcc
Q 042918 139 ---DSTLFSTESYS------R-------------NRFNLWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMVGCTPQQKFLS 196 (285)
Q Consensus 139 ---~~~~~s~~~~~------~-------------~q~~lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~~w~PQ~~iL~ 196 (285)
..+++++++.. . ++..||+++++.. .. .+|+| +++.+|+||.+||+
T Consensus 294 ~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~---~~-~~p~N--------v~i~~w~Pq~~lL~ 361 (507)
T PHA03392 294 STNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE---AI-NLPAN--------VLTQKWFPQRAVLK 361 (507)
T ss_pred CCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC---cc-cCCCc--------eEEecCCCHHHHhc
Confidence 24567755542 1 1223999986411 01 34444 58899999999999
Q ss_pred cCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHHHHHhhc
Q 042918 197 HPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSVMKILKH 276 (285)
Q Consensus 197 h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~~~~~~~ 276 (285)
||++++||||||+||++||+++|||||++|+++||+.||+++++ +|+|+.+++.+ ++.++|++||++++.+++|++
T Consensus 362 hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~~~~---~t~~~l~~ai~~vl~~~~y~~ 437 (507)
T PHA03392 362 HKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALDTVT---VSAAQLVLAIVDVIENPKYRK 437 (507)
T ss_pred CCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH-cCcEEEeccCC---cCHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999987 79999999865 899999999999776677776
Q ss_pred cCc
Q 042918 277 VPW 279 (285)
Q Consensus 277 ~~~ 279 (285)
-|.
T Consensus 438 ~a~ 440 (507)
T PHA03392 438 NLK 440 (507)
T ss_pred HHH
Confidence 543
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1e-33 Score=269.44 Aligned_cols=254 Identities=20% Similarity=0.300 Sum_probs=164.6
Q ss_pred CccEEEeCCcchhHHHHHHHcC-CceEEEecchHHHHHHHhhhhhHH-Hhhcc-------CCcccccc------------
Q 042918 19 KISCVIADGAMGWAMVAAEEMK-IRRAAYLACSSWTTGLLLNQLMKF-ISLFI-------SGTAIKKH------------ 77 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lg-iP~i~~~~~~~~~~~~~~~~~p~~-~~~~~-------~~~~~~~~------------ 77 (285)
+|||+|+|.++.|...+|...+ ++..++++.++....+.. +.+.. ..... ..++.+..
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 192 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGL-PSPLSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLF 192 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCC-cCcccccCcccCccccccCcHHHHHHHHHHHHHHHHHH
Confidence 4999999999889999988885 999988888776655443 21111 00000 00110000
Q ss_pred ----------cc-ccCCC----Cccc-ccccCcceEEEcccccCChhhhhcCCCcccccccccccCCCCC-CCCCC----
Q 042918 78 ----------MI-QLAPT----MATI-HSTKLGEWMLCKSKYDLEPGALALIPELLPLGQLLASNRLGNS-AGFFW---- 136 (285)
Q Consensus 78 ----------~~-~~~pg----~~~~-~~~~~~~~vlvns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~-~~~~~---- 136 (285)
.. ..... .+.. ..+.+++..++|+...++...++..+++++|||++........ +...|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~ 272 (496)
T KOG1192|consen 193 SLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQKSPLPLEWLDIL 272 (496)
T ss_pred HHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCccccccccHHHHHHH
Confidence 00 00000 1112 2235788999999999888557778999999999987322111 11112
Q ss_pred CC---CCceeeeeec------Cccc--------------eEEEEEcCCCCCCCCccccccCccccccccceeeeecChhh
Q 042918 137 PE---DSTLFSTESY------SRNR--------------FNLWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMVGCTPQQK 193 (285)
Q Consensus 137 ~~---~~~~~s~~~~------~~~q--------------~~lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~~w~PQ~~ 193 (285)
+. ..+++|++++ +++| ..||+++++. .. .+++++.+|-++++...+|+||.+
T Consensus 273 ~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~----~~-~~~~~~~~~~~~nV~~~~W~PQ~~ 347 (496)
T KOG1192|consen 273 DESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDD----SI-YFPEGLPNRGRGNVVLSKWAPQND 347 (496)
T ss_pred hhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCc----ch-hhhhcCCCCCcCceEEecCCCcHH
Confidence 22 3456663333 2222 1299999762 11 256676655223344447999999
Q ss_pred h-cccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC---------CccHHHHHH
Q 042918 194 F-LSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG---------SSQGKKLTT 263 (285)
Q Consensus 194 i-L~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~---------~~~~~~l~~ 263 (285)
+ |+|++|+|||||||||||+||+++|||||++|+|+||+.||+++++++++++....+... .++++++++
T Consensus 348 lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~ 427 (496)
T KOG1192|consen 348 LLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEEYKE 427 (496)
T ss_pred HhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChHHHH
Confidence 9 599999999999999999999999999999999999999999999976666666654211 244566666
Q ss_pred HHHHHHHHHHhhccCcc
Q 042918 264 RWIKCSVMKILKHVPWN 280 (285)
Q Consensus 264 ai~~~~~~~~~~~~~~~ 280 (285)
++++ +++.++..|..
T Consensus 428 ~~~~--l~~~~~~~p~~ 442 (496)
T KOG1192|consen 428 AAKR--LSEILRDQPIS 442 (496)
T ss_pred HHHH--HHHHHHcCCCC
Confidence 6666 55555443333
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.90 E-value=1.2e-23 Score=194.67 Aligned_cols=241 Identities=12% Similarity=0.077 Sum_probs=149.8
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecchHHHHHHHhhhhh---HHHhh-cc-C----CccccccccccCCCCc--c
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACSSWTTGLLLNQLM---KFISL-FI-S----GTAIKKHMIQLAPTMA--T 87 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~p---~~~~~-~~-~----~~~~~~~~~~~~pg~~--~ 87 (285)
+||+||+|.+++|+..+|+.+|||++.+++.............| ..... .. . .+....+....--|++ +
T Consensus 92 ~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~gl~~~~ 171 (392)
T TIGR01426 92 RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEYVARLSALLEEHGITTPP 171 (392)
T ss_pred CCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccccccccccccchhhhhhhccccchhHHHHHHHHHHHHHhCCCCCC
Confidence 69999999998999999999999999886543211000000000 00000 00 0 0000000011112221 2
Q ss_pred cccc--cCcceEEEcccccCChhhhhcCCCcccccccccccCCCCCCCCCCC----CCCceeeeeecCcc----------
Q 042918 88 IHST--KLGEWMLCKSKYDLEPGALALIPELLPLGQLLASNRLGNSAGFFWP----EDSTLFSTESYSRN---------- 151 (285)
Q Consensus 88 ~~~~--~~~~~vlvns~~~le~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~---------- 151 (285)
...+ ...+..++.+.+.|+++..+..+++.++||+........ .++. ...+|++++++...
T Consensus 172 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~~~---~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 248 (392)
T TIGR01426 172 VEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKEDG---SWERPGDGRPVVLISLGTVFNNQPSFYRTCVE 248 (392)
T ss_pred HHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCccccC---CCCCCCCCCCEEEEecCccCCCCHHHHHHHHH
Confidence 2222 234457788888888763445678999999876432111 1111 12346665553221
Q ss_pred ------ceEEEEEcCCCCCCCCccccccCccccccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEec
Q 042918 152 ------RFNLWAVRPDMTDNSNDDAYQKGFQDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCW 225 (285)
Q Consensus 152 ------q~~lW~~~~~~~~~~~~~~lp~~f~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~ 225 (285)
...+|............ .+| ++..+.+|+||.++|+|.+ +||||||+||++||+++|+|+|++
T Consensus 249 al~~~~~~~i~~~g~~~~~~~~~-~~~--------~~v~~~~~~p~~~ll~~~~--~~I~hgG~~t~~Eal~~G~P~v~~ 317 (392)
T TIGR01426 249 AFRDLDWHVVLSVGRGVDPADLG-ELP--------PNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAV 317 (392)
T ss_pred HHhcCCCeEEEEECCCCChhHhc-cCC--------CCeEEeCCCCHHHHHhhCC--EEEECCCchHHHHHHHhCCCEEec
Confidence 11255554331100011 223 3457789999999998876 599999999999999999999999
Q ss_pred cccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHHHHHhhcc
Q 042918 226 PYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSVMKILKHV 277 (285)
Q Consensus 226 P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~~~~~~~~ 277 (285)
|.+.||+.||+++++ +|+|+.+...+ ++.++|.++|++.+.++++++.
T Consensus 318 p~~~dq~~~a~~l~~-~g~g~~l~~~~---~~~~~l~~ai~~~l~~~~~~~~ 365 (392)
T TIGR01426 318 PQGADQPMTARRIAE-LGLGRHLPPEE---VTAEKLREAVLAVLSDPRYAER 365 (392)
T ss_pred CCcccHHHHHHHHHH-CCCEEEecccc---CCHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999987 79999988654 8999999999987666555443
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.88 E-value=6.7e-23 Score=190.04 Aligned_cols=86 Identities=15% Similarity=0.251 Sum_probs=76.6
Q ss_pred ccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHH
Q 042918 181 TRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKK 260 (285)
Q Consensus 181 ~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~ 260 (285)
+|+++.+|+||.++|.|.+ +||||||+||+.||+++|||+|++|++.||+.||+++++ +|+|+.+...+ ++.++
T Consensus 288 ~~v~~~~~~p~~~ll~~~d--~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~~~---~~~~~ 361 (401)
T cd03784 288 DNVRVVDFVPHDWLLPRCA--AVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRE---LTAER 361 (401)
T ss_pred CceEEeCCCCHHHHhhhhh--eeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCccc---CCHHH
Confidence 4568889999999998855 599999999999999999999999999999999999988 79999998764 89999
Q ss_pred HHHHHHHHHHHH
Q 042918 261 LTTRWIKCSVMK 272 (285)
Q Consensus 261 l~~ai~~~~~~~ 272 (285)
|.+++++.+..+
T Consensus 362 l~~al~~~l~~~ 373 (401)
T cd03784 362 LAAALRRLLDPP 373 (401)
T ss_pred HHHHHHHHhCHH
Confidence 999998865433
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.74 E-value=2e-18 Score=160.11 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=87.6
Q ss_pred ccccCccccccccceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEee
Q 042918 170 AYQKGFQDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFN 249 (285)
Q Consensus 170 ~lp~~f~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~ 249 (285)
.+|.|| ++..|+||.++|.|.++ ||||||+||+.||+++|||+|++|...||+.||.++++ .|+|+.+.
T Consensus 281 ~~p~n~--------~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~ 349 (406)
T COG1819 281 NVPDNV--------IVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALP 349 (406)
T ss_pred cCCCce--------EEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecC
Confidence 566665 89999999999988777 99999999999999999999999999999999999988 79999999
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHhhccCc
Q 042918 250 KTKMGSSQGKKLTTRWIKCSVMKILKHVPW 279 (285)
Q Consensus 250 ~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~ 279 (285)
.++ .+.+.++++|++++.++.+++.+.
T Consensus 350 ~~~---l~~~~l~~av~~vL~~~~~~~~~~ 376 (406)
T COG1819 350 FEE---LTEERLRAAVNEVLADDSYRRAAE 376 (406)
T ss_pred ccc---CCHHHHHHHHHHHhcCHHHHHHHH
Confidence 876 899999999999988888876544
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.42 E-value=4.6e-12 Score=113.83 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=68.2
Q ss_pred cceeeeec--ChhhhcccCccceEEecCCchhHHHhHhcCceeEeccc--cccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCT--PQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPY--FAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~--PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~--~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
|..+.++. .-.+.|+..++ +|||||+|++.|++++|+|+|.+|. +.+|..||+++++ .|+|+.+..++ ++
T Consensus 233 ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~---~~ 306 (318)
T PF13528_consen 233 NIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQED---LT 306 (318)
T ss_pred CEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEccccc---CC
Confidence 34566654 44567766655 9999999999999999999999999 8899999999988 79999998654 89
Q ss_pred HHHHHHHHHH
Q 042918 258 GKKLTTRWIK 267 (285)
Q Consensus 258 ~~~l~~ai~~ 267 (285)
++.|+++|++
T Consensus 307 ~~~l~~~l~~ 316 (318)
T PF13528_consen 307 PERLAEFLER 316 (318)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 29
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.41 E-value=3.6e-12 Score=115.13 Aligned_cols=84 Identities=18% Similarity=0.194 Sum_probs=65.9
Q ss_pred ccceeeeecChhhhccc-CccceEEecCCchhHHHhHhcCceeEeccccc--cchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 181 TRGQMVGCTPQQKFLSH-PSIACFLRHCGWNPTTEGVSNGLAFLCWPYFA--EQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 181 ~~~~v~~w~PQ~~iL~h-~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~--DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
+|..+.+|.| .+++.+ +...++|||||++++.||+++|+|++.+|..+ ||..||+.+++ .|+|+.++..+ +
T Consensus 229 ~~v~~~~~~~-~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~---~- 302 (321)
T TIGR00661 229 ENVEIRRITT-DNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKE---L- 302 (321)
T ss_pred CCEEEEECCh-HHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhh---H-
Confidence 3457779998 455565 77777999999999999999999999999966 89999999988 79999998654 3
Q ss_pred HHHHHHHHHHHHHHH
Q 042918 258 GKKLTTRWIKCSVMK 272 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~ 272 (285)
++.+++.+...++
T Consensus 303 --~~~~~~~~~~~~~ 315 (321)
T TIGR00661 303 --RLLEAILDIRNMK 315 (321)
T ss_pred --HHHHHHHhccccc
Confidence 4444555433333
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=98.99 E-value=1.6e-10 Score=94.44 Aligned_cols=87 Identities=10% Similarity=0.136 Sum_probs=68.3
Q ss_pred ccceeeeecC-hhhhcccCccceEEecCCchhHHHhHhcCceeEeccccc----cchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTP-QQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFA----EQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~P-Q~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~----DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
.+..+.+|.+ -.++++..++ .|||||.+++.|++++|+|+|.+|.-. +|..||+.+++ .|.|+.+...+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~--- 128 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESE--- 128 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC---
T ss_pred CcEEEEechhhHHHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCccc---
Confidence 3456779999 6678888886 999999999999999999999999999 99999999988 69999988764
Q ss_pred ccHHHHHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCSVMKI 273 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~~ 273 (285)
.+.++|.++|.+...++.
T Consensus 129 ~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 129 LNPEELAEAIEELLSDPE 146 (167)
T ss_dssp -SCCCHHHHHHCHCCCHH
T ss_pred CCHHHHHHHHHHHHcCcH
Confidence 668889999887544443
No 31
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.73 E-value=1.5e-08 Score=92.72 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=67.3
Q ss_pred eeeeec-C-hhhhcccCccceEEecCCchhHHHhHhcCceeEecccc-----ccchhhHHHHHHHhcceEEeecCCCCCc
Q 042918 184 QMVGCT-P-QQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYF-----AEQFLNESYICAIRKVGQRFNKTKMGSS 256 (285)
Q Consensus 184 ~v~~w~-P-Q~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~-----~DQ~~na~~~~~~~gvG~~l~~~~~~~~ 256 (285)
.+.+|. + =.++++++++ +|||||.+++.|++++|+|+|.+|+. .||..||+++++ .|+|..+..++ +
T Consensus 237 ~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~~~---~ 310 (352)
T PRK12446 237 RQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYEED---V 310 (352)
T ss_pred EEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcchhc---C
Confidence 344555 3 3368888886 99999999999999999999999985 489999999998 79999998654 8
Q ss_pred cHHHHHHHHHHHH
Q 042918 257 QGKKLTTRWIKCS 269 (285)
Q Consensus 257 ~~~~l~~ai~~~~ 269 (285)
+.+.|.+++.+.+
T Consensus 311 ~~~~l~~~l~~ll 323 (352)
T PRK12446 311 TVNSLIKHVEELS 323 (352)
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998754
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.45 E-value=2.7e-07 Score=84.21 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=70.9
Q ss_pred ceeeeec-ChhhhcccCccceEEecCCchhHHHhHhcCceeEeccc----cccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 183 GQMVGCT-PQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPY----FAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 183 ~~v~~w~-PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~----~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
+.+.+|. .-.++|+..++ ||+|+|.++++||+++|+|+|+.|. .++|..|+..+.+ .|.|..+..++ ++
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~---~~ 310 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSD---LT 310 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEccc---CC
Confidence 4556887 34578877776 9999999999999999999999997 4789999999988 69999998654 68
Q ss_pred HHHHHHHHHHHHHHHHh
Q 042918 258 GKKLTTRWIKCSVMKIL 274 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~~~ 274 (285)
.+++.++|.+.+.++.+
T Consensus 311 ~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 311 PEKLAEKLLELLSDPER 327 (357)
T ss_pred HHHHHHHHHHHHcCHHH
Confidence 99999999986555444
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.21 E-value=2.5e-06 Score=77.33 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=73.8
Q ss_pred ccceeeeec-ChhhhcccCccceEEecCCchhHHHhHhcCceeEeccc----cccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCT-PQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPY----FAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~-PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~----~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
++..+.+|. .-.+.|+..++ ||+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+ .|.|+.+...+
T Consensus 235 ~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~--- 308 (350)
T cd03785 235 VNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEE--- 308 (350)
T ss_pred CCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCC---
Confidence 455666876 45567877666 9999999999999999999999986 4678899999988 59999998643
Q ss_pred ccHHHHHHHHHHHHHHH-HhhccCccccc
Q 042918 256 SQGKKLTTRWIKCSVMK-ILKHVPWNSRK 283 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~-~~~~~~~~~~~ 283 (285)
.+.+++.+++++.+.++ .+++...++++
T Consensus 309 ~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 337 (350)
T cd03785 309 LTPERLAAALLELLSDPERLKAMAEAARS 337 (350)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 57899999998764433 33444444443
No 34
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.15 E-value=2.9e-06 Score=77.58 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=71.1
Q ss_pred eeeeecChhh-hcccCccceEEecCCchhHHHhHhcCceeEeccc-cc---cchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 184 QMVGCTPQQK-FLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPY-FA---EQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 184 ~v~~w~PQ~~-iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~-~~---DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
.+.++..+.. +++-.++ .||+.|.+++.|..+.|+|+|.+|. .+ +|..||+.+++ .|.|..+...+ +|.
T Consensus 238 ~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~---lt~ 311 (357)
T COG0707 238 RVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSE---LTP 311 (357)
T ss_pred EEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEecccc---CCH
Confidence 3446666543 5555554 9999999999999999999999998 33 89999999998 69999999775 899
Q ss_pred HHHHHHHHHHHHH-HHhhccCccc
Q 042918 259 KKLTTRWIKCSVM-KILKHVPWNS 281 (285)
Q Consensus 259 ~~l~~ai~~~~~~-~~~~~~~~~~ 281 (285)
+++.+.|.+.+.. +.+++.+.|+
T Consensus 312 ~~l~~~i~~l~~~~~~l~~m~~~a 335 (357)
T COG0707 312 EKLAELILRLLSNPEKLKAMAENA 335 (357)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999885432 3344443333
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=97.94 E-value=1.4e-05 Score=72.35 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=62.3
Q ss_pred ChhhhcccCccceEEecCCchhHHHhHhcCceeEecccc---ccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHH
Q 042918 190 PQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYF---AEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWI 266 (285)
Q Consensus 190 PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~---~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~ 266 (285)
.-.++|+..++ ||+++|-++++||+++|+|+|+.|+- ++|..|+..+.+ .+.|..+...+ .+.+++.++++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~---~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKE---LLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEeccc---CCHHHHHHHHH
Confidence 34567777776 99999988999999999999999873 467889999987 69999887543 57899999998
Q ss_pred HHHHHHH
Q 042918 267 KCSVMKI 273 (285)
Q Consensus 267 ~~~~~~~ 273 (285)
+.+.+++
T Consensus 317 ~ll~~~~ 323 (348)
T TIGR01133 317 KLLLDPA 323 (348)
T ss_pred HHHcCHH
Confidence 7654443
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=97.69 E-value=6.8e-05 Score=69.63 Aligned_cols=78 Identities=12% Similarity=0.227 Sum_probs=61.0
Q ss_pred cceeeeecChh-hhcccCccceEEecCCchhHHHhHhcCceeEec-cccccchhhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCW-PYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~-P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
+..+.+|..+. ++++..++ |||-.|-.++.||+++|+|+|+. |.-+.|..|+..+.+ .|+|+... +.+
T Consensus 257 ~v~~~G~~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~-------~~~ 326 (391)
T PRK13608 257 NVLILGYTKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD-------TPE 326 (391)
T ss_pred CeEEEeccchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC-------CHH
Confidence 44566888654 47777777 89988888999999999999998 776777899999988 69998754 356
Q ss_pred HHHHHHHHHH
Q 042918 260 KLTTRWIKCS 269 (285)
Q Consensus 260 ~l~~ai~~~~ 269 (285)
++.++|.+..
T Consensus 327 ~l~~~i~~ll 336 (391)
T PRK13608 327 EAIKIVASLT 336 (391)
T ss_pred HHHHHHHHHh
Confidence 6667666643
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=97.65 E-value=0.00013 Score=67.17 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=62.4
Q ss_pred cceeeeecChh-hhcccCccceEEecCCchhHHHhHhcCceeEec-cccccchhhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCW-PYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~-P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
+..+.+|+++. +++++.++ ||+..|..+++||+++|+|+|+. |..+.|..|+..+.+ .|.|+... +.+
T Consensus 257 ~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~~-------~~~ 326 (380)
T PRK13609 257 ALKVFGYVENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVIR-------DDE 326 (380)
T ss_pred cEEEEechhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEEC-------CHH
Confidence 45667998874 78888886 99999988999999999999994 777778899998876 58887642 367
Q ss_pred HHHHHHHHHH
Q 042918 260 KLTTRWIKCS 269 (285)
Q Consensus 260 ~l~~ai~~~~ 269 (285)
++.++|.+.+
T Consensus 327 ~l~~~i~~ll 336 (380)
T PRK13609 327 EVFAKTEALL 336 (380)
T ss_pred HHHHHHHHHH
Confidence 7888877654
No 38
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=97.63 E-value=9.2e-05 Score=68.45 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=66.6
Q ss_pred cceeeeecChh-hhcccCccceEEecCCchhHHHhHhcCceeEeccccccch-hhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQF-LNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~-~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
+..+.+|+++. ++++..++ ||+.+|-++++||+++|+|+|+.+....|. .|+..+.+ .|.|+.+. +.+
T Consensus 266 ~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~~-------~~~ 335 (382)
T PLN02605 266 PVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFSE-------SPK 335 (382)
T ss_pred CeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeecC-------CHH
Confidence 34566888754 46666666 999999899999999999999998777775 69998887 59998652 477
Q ss_pred HHHHHHHHHHHH--HHhhccCcccc
Q 042918 260 KLTTRWIKCSVM--KILKHVPWNSR 282 (285)
Q Consensus 260 ~l~~ai~~~~~~--~~~~~~~~~~~ 282 (285)
++.++|.+.+.+ +.+++...|++
T Consensus 336 ~la~~i~~ll~~~~~~~~~m~~~~~ 360 (382)
T PLN02605 336 EIARIVAEWFGDKSDELEAMSENAL 360 (382)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 888888775433 33444444443
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=97.53 E-value=6.2e-05 Score=66.70 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=47.3
Q ss_pred cceeeeecChh-hhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHH
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESY 237 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~ 237 (285)
+..+..++++. ++++..++ +||+|| +++.|+++.|+|+|.+|...+|..||+.
T Consensus 225 ~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 225 NIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 45667899886 78888877 999999 9999999999999999999999999975
No 40
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.34 E-value=0.0072 Score=54.39 Aligned_cols=81 Identities=15% Similarity=0.099 Sum_probs=65.9
Q ss_pred cceeeeecChhh-hcccCccceEEecCCchhHHHhHhcCceeEeccccc---cchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCTPQQK-FLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFA---EQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~PQ~~-iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~---DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
+..|..|--+.. +|+-. ...|+-||+|++.|=+++|+|-+.+|... +|-.-|.|+++ +|.--.|..++ ++
T Consensus 278 ~i~I~~f~~~~~~ll~gA--~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~---lt 351 (400)
T COG4671 278 HISIFEFRNDFESLLAGA--RLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPEN---LT 351 (400)
T ss_pred CeEEEEhhhhHHHHHHhh--heeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCccc---CC
Confidence 345557766555 44333 34899999999999999999999999966 89999999987 89888888765 89
Q ss_pred HHHHHHHHHHH
Q 042918 258 GKKLTTRWIKC 268 (285)
Q Consensus 258 ~~~l~~ai~~~ 268 (285)
++.+.++|+.+
T Consensus 352 ~~~La~al~~~ 362 (400)
T COG4671 352 PQNLADALKAA 362 (400)
T ss_pred hHHHHHHHHhc
Confidence 99999999874
No 41
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.10 E-value=0.016 Score=51.74 Aligned_cols=78 Identities=8% Similarity=0.056 Sum_probs=55.1
Q ss_pred ccceeeeecChhh---hcccCccceEEecCC----chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRHCG----WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM 253 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitHgG----~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~ 253 (285)
.+..+.+|+|+.+ +++..++ |+.++. -++++||+++|+|+|+.+..+ +...+.+ .+.|......
T Consensus 247 ~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~~-- 317 (364)
T cd03814 247 PNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEPG-- 317 (364)
T ss_pred CcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCCC--
Confidence 3456678999876 5777776 554443 378999999999999987543 5555655 4788877754
Q ss_pred CCccHHHHHHHHHHHHH
Q 042918 254 GSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~ 270 (285)
+.+++.+++.+...
T Consensus 318 ---~~~~l~~~i~~l~~ 331 (364)
T cd03814 318 ---DAEAFAAALAALLA 331 (364)
T ss_pred ---CHHHHHHHHHHHHc
Confidence 46668878777543
No 42
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=95.80 E-value=0.013 Score=54.11 Aligned_cols=93 Identities=11% Similarity=0.130 Sum_probs=60.8
Q ss_pred ccceeeeecChhhh---cccCccceEEec--CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 181 TRGQMVGCTPQQKF---LSHPSIACFLRH--CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~~v~~fitH--gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
.+..+.+++|+.++ ++..++-.+=+. -|+ .+++||+++|+|+|+-... .+...+.+ -..|..+...
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~-~~~G~~l~~~--- 328 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLE-GITGYHLAEP--- 328 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhccc-CCceEEEeCC---
Confidence 34556688886654 777777433332 333 5788999999999997652 34445544 3568755432
Q ss_pred CccHHHHHHHHHHHHHHHHhhccCcccc
Q 042918 255 SSQGKKLTTRWIKCSVMKILKHVPWNSR 282 (285)
Q Consensus 255 ~~~~~~l~~ai~~~~~~~~~~~~~~~~~ 282 (285)
-+.+++.++|.+.+.++.+++...+++
T Consensus 329 -~d~~~la~~I~~ll~d~~~~~~~~~ar 355 (380)
T PRK15484 329 -MTSDSIISDINRTLADPELTQIAEQAK 355 (380)
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 358899999988776666666655554
No 43
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=95.69 E-value=0.022 Score=53.09 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=60.8
Q ss_pred cceeeeecChhhhc---ccCccceEEecCC----chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 182 RGQMVGCTPQQKFL---SHPSIACFLRHCG----WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 182 ~~~v~~w~PQ~~iL---~h~~v~~fitHgG----~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
+....+|+|+.++. +..+..+|+...- -++++||+++|+|+|+-.. ......+.+ -+.|..+...
T Consensus 290 ~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~~-~~~G~l~~~~--- 361 (407)
T cd04946 290 SVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVDN-GGNGLLLSKD--- 361 (407)
T ss_pred eEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhcC-CCcEEEeCCC---
Confidence 44556999987644 4444556765543 3689999999999998543 335556654 3478887753
Q ss_pred CccHHHHHHHHHHHHH-HHHhhccCccccc
Q 042918 255 SSQGKKLTTRWIKCSV-MKILKHVPWNSRK 283 (285)
Q Consensus 255 ~~~~~~l~~ai~~~~~-~~~~~~~~~~~~~ 283 (285)
-+.+++.++|.+... .+..++...|+++
T Consensus 362 -~~~~~la~~I~~ll~~~~~~~~m~~~ar~ 390 (407)
T cd04946 362 -PTPNELVSSLSKFIDNEEEYQTMREKARE 390 (407)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 357889999988544 2334445555543
No 44
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.60 E-value=0.018 Score=51.59 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=60.9
Q ss_pred ccceeeeecChhh---hcccCccceEEec---CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH---CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM 253 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH---gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~ 253 (285)
.++.+.+|+|+.+ +++..++..+-++ -|+ .+++||+++|+|+|+-...+.. ..+.+.-+.|...+.+
T Consensus 244 ~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~~~g~~~~~~-- 317 (357)
T cd03795 244 DRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHGVTGLVVPPG-- 317 (357)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCCCceEEeCCC--
Confidence 4566779999854 6666777555553 343 4799999999999986544433 3333213677777653
Q ss_pred CCccHHHHHHHHHHHHHHH-HhhccCccccc
Q 042918 254 GSSQGKKLTTRWIKCSVMK-ILKHVPWNSRK 283 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~~~-~~~~~~~~~~~ 283 (285)
+.+++.++|.+++.++ .+++.++|+++
T Consensus 318 ---d~~~~~~~i~~l~~~~~~~~~~~~~~~~ 345 (357)
T cd03795 318 ---DPAALAEAIRRLLEDPELRERLGEAARE 345 (357)
T ss_pred ---CHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 5888999998865443 34555555543
No 45
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=95.52 E-value=0.031 Score=49.65 Aligned_cols=93 Identities=11% Similarity=0.092 Sum_probs=60.4
Q ss_pred ccceeeeecChhhh---cccCccceEEec--CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 181 TRGQMVGCTPQQKF---LSHPSIACFLRH--CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~~v~~fitH--gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
.+..+.+|+|+.++ ++..++..+-++ .|+ .+++||+++|+|+|+-+. ......+.+ -+.|..+..+
T Consensus 243 ~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~--- 314 (359)
T cd03823 243 PRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRD-GVNGLLFPPG--- 314 (359)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcC-CCcEEEECCC---
Confidence 34566689887764 777776444342 344 578999999999998654 445556654 3578887764
Q ss_pred CccHHHHHHHHHHHHHHH-HhhccCccccc
Q 042918 255 SSQGKKLTTRWIKCSVMK-ILKHVPWNSRK 283 (285)
Q Consensus 255 ~~~~~~l~~ai~~~~~~~-~~~~~~~~~~~ 283 (285)
+.+++.+++.+...+. ..++...++++
T Consensus 315 --d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 315 --DAEDLAAALERLIDDPDLLERLRAGIEP 342 (359)
T ss_pred --CHHHHHHHHHHHHhChHHHHHHHHhHHH
Confidence 3788888888765433 34444444443
No 46
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.43 E-value=0.016 Score=52.40 Aligned_cols=82 Identities=10% Similarity=-0.049 Sum_probs=55.5
Q ss_pred ccceeeeecChhhh---cccCccceEEec--------CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEee
Q 042918 181 TRGQMVGCTPQQKF---LSHPSIACFLRH--------CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFN 249 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~~v~~fitH--------gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~ 249 (285)
++..+.+++|+.++ ++..++..+-+- |--++++||+++|+|+|+-+.. .+...+.+ -+.|..++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~-~~~g~~~~ 319 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVED-GETGLLVP 319 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhheec-CCeeEEEC
Confidence 34556688887654 777777443221 2247899999999999987653 35566655 47788776
Q ss_pred cCCCCCccHHHHHHHHHHHHHHH
Q 042918 250 KTKMGSSQGKKLTTRWIKCSVMK 272 (285)
Q Consensus 250 ~~~~~~~~~~~l~~ai~~~~~~~ 272 (285)
.. +.+++.++|.+.+.++
T Consensus 320 ~~-----d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 320 EG-----DVAALAAALGRLLADP 337 (367)
T ss_pred CC-----CHHHHHHHHHHHHcCH
Confidence 53 4688988988754433
No 47
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.38 E-value=0.032 Score=44.92 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=59.9
Q ss_pred ccceeeeecChh---hhcccCccceEEec----CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC
Q 042918 181 TRGQMVGCTPQQ---KFLSHPSIACFLRH----CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM 253 (285)
Q Consensus 181 ~~~~v~~w~PQ~---~iL~h~~v~~fitH----gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~ 253 (285)
.+..+.++.++. +++...++ ++.. ++-++++||+++|+|+|+. |...+...+.+ ...|..++..
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~~-- 143 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDPN-- 143 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEESTT--
T ss_pred cccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCCC--
Confidence 345667888733 35666665 4433 4456999999999999985 45556666655 4668888864
Q ss_pred CCccHHHHHHHHHHHHHHH-HhhccCcccccC
Q 042918 254 GSSQGKKLTTRWIKCSVMK-ILKHVPWNSRKR 284 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~~~-~~~~~~~~~~~~ 284 (285)
+.+++.++|.+.+.++ ..++...|+++|
T Consensus 144 ---~~~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 144 ---DIEELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 6888998988754443 455555666554
No 48
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=95.32 E-value=0.012 Score=54.52 Aligned_cols=75 Identities=9% Similarity=-0.009 Sum_probs=59.4
Q ss_pred hhhhcccCccceEEecCCchhHHHhHhcCceeEec----cccc---------cchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 191 QQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCW----PYFA---------EQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 191 Q~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~----P~~~---------DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
..++++..++ ||+=+|..++ |++++|+|+|.. |+.. +|..|+..+.+ .++...+..++ ++
T Consensus 261 ~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~---~~ 333 (385)
T TIGR00215 261 ARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEE---CT 333 (385)
T ss_pred HHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCC---CC
Confidence 3457777766 9999998776 999999999999 7743 28889999987 58888877554 89
Q ss_pred HHHHHHHHHHHHHHH
Q 042918 258 GKKLTTRWIKCSVMK 272 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~ 272 (285)
++.|.+.+.+.+.+.
T Consensus 334 ~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 334 PHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999988765443
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.99 E-value=0.032 Score=49.88 Aligned_cols=90 Identities=11% Similarity=0.019 Sum_probs=56.7
Q ss_pred cceeeeecChhh---hcccCccceEEecCC-------chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 182 RGQMVGCTPQQK---FLSHPSIACFLRHCG-------WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 182 ~~~v~~w~PQ~~---iL~h~~v~~fitHgG-------~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
+..+.+|+|+.+ +++..++..+-++.+ -++++||+++|+|+|+.+..+.+. .+.+ .+.|..+..+
T Consensus 276 ~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~-~~~g~~~~~~ 350 (394)
T cd03794 276 NVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEE-AGAGLVVPPG 350 (394)
T ss_pred cEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhcc-CCcceEeCCC
Confidence 456668888766 566777644444322 234799999999999987665433 3333 3677777653
Q ss_pred CCCCccHHHHHHHHHHHHHH-HHhhccCccc
Q 042918 252 KMGSSQGKKLTTRWIKCSVM-KILKHVPWNS 281 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~~~-~~~~~~~~~~ 281 (285)
+.+++.++|.+.+.+ +.+++...++
T Consensus 351 -----~~~~l~~~i~~~~~~~~~~~~~~~~~ 376 (394)
T cd03794 351 -----DPEALAAAILELLDDPEERAEMGENG 376 (394)
T ss_pred -----CHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 578888888875422 3334444443
No 50
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.85 E-value=0.031 Score=51.73 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=61.2
Q ss_pred ccceeeeecChhh---hcccCccceEEec-CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH-CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH-gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
+++...+++|+.+ +|+..++-.+.+. .|. ++++||+++|+|+|+-. .......+.+ -..|..++..
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~-~~~G~lv~~~---- 351 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITD-GENGLLVDFF---- 351 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhccc-CCceEEcCCC----
Confidence 3455669999876 4567777555444 232 48999999999999863 3445555544 2567777653
Q ss_pred ccHHHHHHHHHHHHHHH-HhhccCccccc
Q 042918 256 SQGKKLTTRWIKCSVMK-ILKHVPWNSRK 283 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~-~~~~~~~~~~~ 283 (285)
+.+++.++|.+.+.+. ..++..+++++
T Consensus 352 -d~~~la~~i~~ll~~~~~~~~l~~~ar~ 379 (396)
T cd03818 352 -DPDALAAAVIELLDDPARRARLRRAARR 379 (396)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4889999998865544 33555555544
No 51
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=94.85 E-value=0.041 Score=50.21 Aligned_cols=91 Identities=8% Similarity=0.013 Sum_probs=58.2
Q ss_pred ccceeeeecChhhh---cccCccceEEec-CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQKF---LSHPSIACFLRH-CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~~v~~fitH-gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
.+..+.+|+|+.++ ++..++-++-++ -| -++++||+++|+|+|+-... .....+.+ .+.|..++..
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~-~~~g~~~~~~---- 353 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVD-GVTGLLVDPR---- 353 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccC-CCCeEEeCCC----
Confidence 34456699998764 777776333232 12 36899999999999987543 34555655 4688887653
Q ss_pred ccHHHHHHHHHHHHHHH-HhhccCccc
Q 042918 256 SQGKKLTTRWIKCSVMK-ILKHVPWNS 281 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~-~~~~~~~~~ 281 (285)
+.+++.++|.+...++ .+++...++
T Consensus 354 -~~~~l~~~i~~l~~~~~~~~~~~~~a 379 (398)
T cd03800 354 -DPEALAAALRRLLTDPALRRRLSRAG 379 (398)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 4788888888754433 333344444
No 52
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=94.58 E-value=0.055 Score=48.17 Aligned_cols=78 Identities=12% Similarity=0.032 Sum_probs=50.8
Q ss_pred ccceeeeecChhh---hcccCccceEEec-CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH-CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH-gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
++..+.+|+|+.+ +++..++-.+-++ .| -++++||+++|+|+|+-+. ......+.+ +.|.....+
T Consensus 262 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~~~--~~~~~~~~~---- 331 (375)
T cd03821 262 DRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELIEY--GCGWVVDDD---- 331 (375)
T ss_pred ceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHhhc--CceEEeCCC----
Confidence 3455669999655 4677777444443 22 3689999999999999653 333444433 677766532
Q ss_pred ccHHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCSV 270 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~ 270 (285)
.+++.++|.+...
T Consensus 332 --~~~~~~~i~~l~~ 344 (375)
T cd03821 332 --VDALAAALRRALE 344 (375)
T ss_pred --hHHHHHHHHHHHh
Confidence 3788888877543
No 53
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=94.45 E-value=0.053 Score=50.62 Aligned_cols=93 Identities=17% Similarity=0.121 Sum_probs=60.9
Q ss_pred ccceeeeecChhh---hcccCccceEEec-------CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEee
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH-------CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFN 249 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH-------gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~ 249 (285)
+++.+.+|+||.+ +++..++-.+-++ =|+ +.++||+++|+|+|+-... .....+.+ -..|..++
T Consensus 279 ~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~-~~~G~lv~ 353 (406)
T PRK15427 279 DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEA-DKSGWLVP 353 (406)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcC-CCceEEeC
Confidence 4556679999875 5666666433333 244 6789999999999997543 33445544 35687776
Q ss_pred cCCCCCccHHHHHHHHHHHHH-HHH-hhccCccccc
Q 042918 250 KTKMGSSQGKKLTTRWIKCSV-MKI-LKHVPWNSRK 283 (285)
Q Consensus 250 ~~~~~~~~~~~l~~ai~~~~~-~~~-~~~~~~~~~~ 283 (285)
.+ +.+++.++|.+... +.+ .++...++++
T Consensus 354 ~~-----d~~~la~ai~~l~~~d~~~~~~~~~~ar~ 384 (406)
T PRK15427 354 EN-----DAQALAQRLAAFSQLDTDELAPVVKRARE 384 (406)
T ss_pred CC-----CHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 54 48889999988655 333 5555555554
No 54
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.43 E-value=0.1 Score=48.65 Aligned_cols=70 Identities=11% Similarity=0.030 Sum_probs=51.1
Q ss_pred hhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHH---hcceEEeecCCCCCccHHHHHHHHHH
Q 042918 191 QQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAI---RKVGQRFNKTKMGSSQGKKLTTRWIK 267 (285)
Q Consensus 191 Q~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~---~gvG~~l~~~~~~~~~~~~l~~ai~~ 267 (285)
-.++++..++ +|+=.|..+ .|+...|+|+|.+|.-.-|. |+...++. .|.++.+... +.+.+.+++.+
T Consensus 290 ~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~~-----~~~~l~~~l~~ 360 (396)
T TIGR03492 290 FAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLASK-----NPEQAAQVVRQ 360 (396)
T ss_pred HHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCCC-----CHHHHHHHHHH
Confidence 3567877776 999999655 99999999999999766676 98877541 1556665532 34788888776
Q ss_pred HH
Q 042918 268 CS 269 (285)
Q Consensus 268 ~~ 269 (285)
.+
T Consensus 361 ll 362 (396)
T TIGR03492 361 LL 362 (396)
T ss_pred HH
Confidence 54
No 55
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.31 E-value=0.059 Score=48.22 Aligned_cols=92 Identities=11% Similarity=0.002 Sum_probs=57.1
Q ss_pred ccceeeeecChhh---hcccCccceEEec--------CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEee
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--------CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFN 249 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--------gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~ 249 (285)
+++.+.+|+|+.+ ++++.++..+-+. |.-++++||+++|+|+|+-+.. .....+.+ ...|..+.
T Consensus 236 ~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~~i~~-~~~g~~~~ 310 (355)
T cd03799 236 DRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----GIPELVED-GETGLLVP 310 (355)
T ss_pred CeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCC----CcchhhhC-CCceEEeC
Confidence 3456668998665 5566777444333 2247899999999999986542 23334443 34787776
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHH-hhccCcccc
Q 042918 250 KTKMGSSQGKKLTTRWIKCSVMKI-LKHVPWNSR 282 (285)
Q Consensus 250 ~~~~~~~~~~~l~~ai~~~~~~~~-~~~~~~~~~ 282 (285)
.+ +.+++.++|.+...++. +++...|++
T Consensus 311 ~~-----~~~~l~~~i~~~~~~~~~~~~~~~~a~ 339 (355)
T cd03799 311 PG-----DPEALADAIERLLDDPELRREMGEAGR 339 (355)
T ss_pred CC-----CHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 53 57888888877543332 344444443
No 56
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=94.23 E-value=0.078 Score=49.02 Aligned_cols=46 Identities=15% Similarity=0.121 Sum_probs=42.4
Q ss_pred EEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeec
Q 042918 203 FLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNK 250 (285)
Q Consensus 203 fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~ 250 (285)
|+-+||+| .+|++++|+|++.-|...-|..-++++.+ -|.|+.++.
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~~ 372 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVED 372 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEECC
Confidence 56699999 78999999999999999999999999988 599999985
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=94.13 E-value=0.086 Score=46.67 Aligned_cols=83 Identities=11% Similarity=0.041 Sum_probs=54.6
Q ss_pred ccceeeeecChhh---hcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
.+..+.+|+|+.+ +++..++..+.++ +.-++++||+++|+|+|+-+.. .....+.+ .+.|...+..
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~-~~~g~~~~~~---- 329 (377)
T cd03798 259 DRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITD-GENGLLVPPG---- 329 (377)
T ss_pred ceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcC-CcceeEECCC----
Confidence 3456668998754 4666666433332 3457899999999999986543 34455554 4667777654
Q ss_pred ccHHHHHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCSVMKI 273 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~~ 273 (285)
+.+++.+++++.+.+..
T Consensus 330 -~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 330 -DPEALAEAILRLLADPW 346 (377)
T ss_pred -CHHHHHHHHHHHhcCcH
Confidence 57888888887654444
No 58
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=93.91 E-value=0.064 Score=50.15 Aligned_cols=56 Identities=9% Similarity=-0.034 Sum_probs=41.6
Q ss_pred cCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 206 HCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 206 HgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
.+|. +++||+++|+|+|+-|..+++......+.+ .|.++... +.+++.+++.+.+.
T Consensus 332 ~~g~-~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~~-------d~~~La~~l~~ll~ 387 (425)
T PRK05749 332 RGGH-NPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQVE-------DAEDLAKAVTYLLT 387 (425)
T ss_pred CCCC-CHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEEC-------CHHHHHHHHHHHhc
Confidence 3444 499999999999999998888887777655 36665533 36788888877543
No 59
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=93.71 E-value=0.08 Score=42.01 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=37.8
Q ss_pred eecCh-hhhcccCccceEEecCCchhHHHhHhcCceeEecccc----ccchhhHHHHHH
Q 042918 187 GCTPQ-QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYF----AEQFLNESYICA 240 (285)
Q Consensus 187 ~w~PQ-~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~----~DQ~~na~~~~~ 240 (285)
.|.|- .+....+++ .|+|+|.+|++|.+..|+|.|+.+-= .-|-.-|..+++
T Consensus 69 ~f~psl~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~ 125 (170)
T KOG3349|consen 69 DFSPSLTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE 125 (170)
T ss_pred ecCccHHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh
Confidence 56775 444444555 99999999999999999999998731 125555666655
No 60
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=93.48 E-value=0.24 Score=43.60 Aligned_cols=91 Identities=9% Similarity=-0.004 Sum_probs=58.5
Q ss_pred ccceeeeecChhh---hcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
.+..+.+++|+.+ +|+..++..+-+. +.-++++||+++|+|+|+.+. ......+.+ .+.|...+..
T Consensus 256 ~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~~~---- 326 (374)
T cd03801 256 DRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVPPG---- 326 (374)
T ss_pred cceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeCCC----
Confidence 3456678987665 5666666333332 345789999999999998765 445556654 3678777753
Q ss_pred ccHHHHHHHHHHHHHHHH-hhccCccc
Q 042918 256 SQGKKLTTRWIKCSVMKI-LKHVPWNS 281 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~~-~~~~~~~~ 281 (285)
+.+++.+++.++..+.. +++.+.++
T Consensus 327 -~~~~l~~~i~~~~~~~~~~~~~~~~~ 352 (374)
T cd03801 327 -DPEALAEAILRLLDDPELRRRLGEAA 352 (374)
T ss_pred -CHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 47888888887543332 33444443
No 61
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=93.40 E-value=0.1 Score=46.26 Aligned_cols=75 Identities=12% Similarity=0.023 Sum_probs=46.5
Q ss_pred hhcccCccceEEecCC----chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHH
Q 042918 193 KFLSHPSIACFLRHCG----WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 193 ~iL~h~~v~~fitHgG----~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~ 268 (285)
++++..++ ++.... -++++||+++|+|+|+- |...+...+.+ .|..+..+ +.+++.+++.+.
T Consensus 264 ~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~----~~~~~~e~~~~---~g~~~~~~-----~~~~l~~~i~~l 329 (365)
T cd03807 264 ALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVAT----DVGDNAELVGD---TGFLVPPG-----DPEALAEAIEAL 329 (365)
T ss_pred HHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEc----CCCChHHHhhc---CCEEeCCC-----CHHHHHHHHHHH
Confidence 46666666 443332 37999999999999985 44445555543 56666643 477888888875
Q ss_pred HHH-HHhhccCccc
Q 042918 269 SVM-KILKHVPWNS 281 (285)
Q Consensus 269 ~~~-~~~~~~~~~~ 281 (285)
..+ +.+++.+.++
T Consensus 330 ~~~~~~~~~~~~~~ 343 (365)
T cd03807 330 LADPALRQALGEAA 343 (365)
T ss_pred HhChHHHHHHHHHH
Confidence 443 2333333333
No 62
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=93.32 E-value=0.19 Score=44.76 Aligned_cols=79 Identities=13% Similarity=0.131 Sum_probs=52.3
Q ss_pred ccceeeeecChhh---hcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
++....+++|+.+ ++++.++..+-+. +.-++++||+++|+|+|+... ...+..+.+ .+.|..+..++
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~-~~~g~~~~~~~--- 330 (374)
T cd03817 259 DRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVAD-GENGFLFPPGD--- 330 (374)
T ss_pred CcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheec-CceeEEeCCCC---
Confidence 3456679999876 5677777443332 234789999999999998653 344555554 46788887543
Q ss_pred ccHHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCSV 270 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~ 270 (285)
. ++.+++.++..
T Consensus 331 --~-~~~~~i~~l~~ 342 (374)
T cd03817 331 --E-ALAEALLRLLQ 342 (374)
T ss_pred --H-HHHHHHHHHHh
Confidence 1 77777776543
No 63
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=93.31 E-value=0.16 Score=47.41 Aligned_cols=86 Identities=10% Similarity=0.116 Sum_probs=57.9
Q ss_pred eecChhhh---cccCccceEE--ec--CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 187 GCTPQQKF---LSHPSIACFL--RH--CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 187 ~w~PQ~~i---L~h~~v~~fi--tH--gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
+|+|..++ |+..++.... +- -| -+.++||+++|+|+|+... ......+++ -+.|..+. +.
T Consensus 301 g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv~-------d~ 368 (415)
T cd03816 301 PWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVFG-------DS 368 (415)
T ss_pred CcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEEC-------CH
Confidence 68886664 6677774321 11 12 3579999999999998643 344555655 46788773 37
Q ss_pred HHHHHHHHHHHHH----HHhhccCcccccC
Q 042918 259 KKLTTRWIKCSVM----KILKHVPWNSRKR 284 (285)
Q Consensus 259 ~~l~~ai~~~~~~----~~~~~~~~~~~~~ 284 (285)
+++.++|.+.+.+ +..++...|++++
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~ 398 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEE 398 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 8999999987665 5567777777664
No 64
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=93.07 E-value=0.11 Score=46.53 Aligned_cols=88 Identities=9% Similarity=-0.039 Sum_probs=54.7
Q ss_pred cceeeeecC-hh---hhcccCccceEEecC----CchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC
Q 042918 182 RGQMVGCTP-QQ---KFLSHPSIACFLRHC----GWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM 253 (285)
Q Consensus 182 ~~~v~~w~P-Q~---~iL~h~~v~~fitHg----G~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~ 253 (285)
+....+|++ +. .+++..++ ++.-. .-++++||+++|+|+|+.... .....+.+ .+.|..+...
T Consensus 245 ~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~-~~~g~~~~~~-- 315 (365)
T cd03825 245 PVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDH-GVTGYLAKPG-- 315 (365)
T ss_pred ceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeC-CCceEEeCCC--
Confidence 445568888 44 35776666 55433 247899999999999986542 23334433 2467766643
Q ss_pred CCccHHHHHHHHHHHHHHHH-hhccCccc
Q 042918 254 GSSQGKKLTTRWIKCSVMKI-LKHVPWNS 281 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~~~~-~~~~~~~~ 281 (285)
+.+++.+++.+.+.++. +++...++
T Consensus 316 ---~~~~~~~~l~~l~~~~~~~~~~~~~~ 341 (365)
T cd03825 316 ---DPEDLAEGIEWLLADPDEREELGEAA 341 (365)
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 57888888887654433 44444443
No 65
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=92.68 E-value=0.12 Score=47.12 Aligned_cols=80 Identities=10% Similarity=-0.026 Sum_probs=49.8
Q ss_pred hhcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 193 KFLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 193 ~iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
++|+..++-++-++ |--++++||+++|+|+|+-.. ..+...+.+ -..|..++.+ +.+++.++|.+.+.
T Consensus 268 ~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~-~~~g~~~~~~-----d~~~la~~i~~l~~ 337 (374)
T TIGR03088 268 ALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQH-GVTGALVPPG-----DAVALARALQPYVS 337 (374)
T ss_pred HHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcC-CCceEEeCCC-----CHHHHHHHHHHHHh
Confidence 45666666333333 334789999999999999664 335555544 3568777653 47888888887544
Q ss_pred HH-HhhccCcccc
Q 042918 271 MK-ILKHVPWNSR 282 (285)
Q Consensus 271 ~~-~~~~~~~~~~ 282 (285)
++ ..++...+++
T Consensus 338 ~~~~~~~~~~~a~ 350 (374)
T TIGR03088 338 DPAARRAHGAAGR 350 (374)
T ss_pred CHHHHHHHHHHHH
Confidence 33 2333444443
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=92.59 E-value=0.12 Score=47.13 Aligned_cols=79 Identities=14% Similarity=0.051 Sum_probs=52.1
Q ss_pred eeeeecChh-hhcccCccceEEecC--CchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHH
Q 042918 184 QMVGCTPQQ-KFLSHPSIACFLRHC--GWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKK 260 (285)
Q Consensus 184 ~v~~w~PQ~-~iL~h~~v~~fitHg--G~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~ 260 (285)
.+.++.++. ++++..++-.+.++. .-.+++||+++|+|+|+...-. .....+.+ -..|..++.. +.++
T Consensus 264 ~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~~~-----d~~~ 334 (372)
T cd04949 264 FLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVPKG-----DIEA 334 (372)
T ss_pred EEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeCCC-----cHHH
Confidence 344554443 367777776666664 3468999999999999864321 23445544 3678877753 5788
Q ss_pred HHHHHHHHHHH
Q 042918 261 LTTRWIKCSVM 271 (285)
Q Consensus 261 l~~ai~~~~~~ 271 (285)
+.++|.+.+.+
T Consensus 335 la~~i~~ll~~ 345 (372)
T cd04949 335 LAEAIIELLND 345 (372)
T ss_pred HHHHHHHHHcC
Confidence 88888875444
No 67
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=92.57 E-value=0.15 Score=45.58 Aligned_cols=90 Identities=9% Similarity=0.060 Sum_probs=55.5
Q ss_pred cceee-eecChhh---hcccCccceEEecC---C-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC
Q 042918 182 RGQMV-GCTPQQK---FLSHPSIACFLRHC---G-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM 253 (285)
Q Consensus 182 ~~~v~-~w~PQ~~---iL~h~~v~~fitHg---G-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~ 253 (285)
+.... +|+|+.+ +++..++..+-++. | -++++||+++|+|+|+-+..+ ...+.+ .+.|..+...
T Consensus 248 ~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~~~-- 319 (366)
T cd03822 248 RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVPPG-- 319 (366)
T ss_pred cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEcCC--
Confidence 44455 5688754 55666664333332 3 357889999999999977543 233444 3677777653
Q ss_pred CCccHHHHHHHHHHHHHH-HHhhccCcccc
Q 042918 254 GSSQGKKLTTRWIKCSVM-KILKHVPWNSR 282 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~~-~~~~~~~~~~~ 282 (285)
+.+++.+++.+...+ +..++.+.+++
T Consensus 320 ---d~~~~~~~l~~l~~~~~~~~~~~~~~~ 346 (366)
T cd03822 320 ---DPAALAEAIRRLLADPELAQALRARAR 346 (366)
T ss_pred ---CHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 478888888876544 34444444443
No 68
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=92.50 E-value=0.15 Score=46.77 Aligned_cols=34 Identities=9% Similarity=-0.065 Sum_probs=26.8
Q ss_pred hhhcccCccceEEecCCchhHHHhHhcCceeEecccc
Q 042918 192 QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYF 228 (285)
Q Consensus 192 ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~ 228 (285)
.++++..++ +|+-+|.+.+ ||+++|+|+|..|-.
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~ 289 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKV 289 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEcc
Confidence 456677666 8888887666 999999999988543
No 69
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=92.35 E-value=0.12 Score=46.62 Aligned_cols=83 Identities=10% Similarity=0.117 Sum_probs=56.9
Q ss_pred ccccceeeeecChh---hhcccCccceEEecCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 179 VGTRGQMVGCTPQQ---KFLSHPSIACFLRHCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 179 ~~~~~~v~~w~PQ~---~iL~h~~v~~fitHgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
..+++.+.+|+|+. ++|+..++-.+-+.-|+ .+++||+++|+|+|+....+ ....+.+ -+.|..++.+
T Consensus 240 ~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~~--- 311 (351)
T cd03804 240 AGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEEQ--- 311 (351)
T ss_pred cCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCCC---
Confidence 34566777999985 46778887555455444 46789999999999976433 3334444 3578888754
Q ss_pred CccHHHHHHHHHHHHHH
Q 042918 255 SSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 255 ~~~~~~l~~ai~~~~~~ 271 (285)
+.+++.++|.+...+
T Consensus 312 --~~~~la~~i~~l~~~ 326 (351)
T cd03804 312 --TVESLAAAVERFEKN 326 (351)
T ss_pred --CHHHHHHHHHHHHhC
Confidence 477888888875444
No 70
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=91.70 E-value=0.18 Score=44.46 Aligned_cols=80 Identities=8% Similarity=-0.065 Sum_probs=49.3
Q ss_pred hhcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 193 KFLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 193 ~iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
++++..++-.+-++ |--++++||+++|+|+|+-+.. .....+.+ .+.|..++.+ +.+++.+++.+...
T Consensus 259 ~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~-~~~g~~~~~~-----~~~~~~~~i~~l~~ 328 (359)
T cd03808 259 ELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVID-GVNGFLVPPG-----DAEALADAIERLIE 328 (359)
T ss_pred HHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCC----Cchhhhhc-CcceEEECCC-----CHHHHHHHHHHHHh
Confidence 35666665332222 2247899999999999986443 34455554 3678777653 47888888887433
Q ss_pred H-HHhhccCcccc
Q 042918 271 M-KILKHVPWNSR 282 (285)
Q Consensus 271 ~-~~~~~~~~~~~ 282 (285)
+ +.+++.+.|++
T Consensus 329 ~~~~~~~~~~~~~ 341 (359)
T cd03808 329 DPELRARMGQAAR 341 (359)
T ss_pred CHHHHHHHHHHHH
Confidence 3 33445455544
No 71
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=91.58 E-value=0.45 Score=43.87 Aligned_cols=81 Identities=6% Similarity=-0.014 Sum_probs=52.1
Q ss_pred ccceeeeecChhh---hcccCccceEEe-cCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLR-HCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fit-HgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
+++.+.+++|+.+ +|+..++..+-+ +-|+ ++++||+++|+|+|+-.. ......+.+ -+.|..++.+
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~---- 353 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARV----GGLPVAVAD-GETGLLVDGH---- 353 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecC----CCcHhhhcc-CCceEECCCC----
Confidence 3456668887654 577777633322 2233 589999999999998654 334445544 3678777653
Q ss_pred ccHHHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCSVM 271 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~ 271 (285)
+.+++.++|.+.+.+
T Consensus 354 -d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 354 -DPADWADALARLLDD 368 (405)
T ss_pred -CHHHHHHHHHHHHhC
Confidence 467788888775433
No 72
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=91.25 E-value=0.45 Score=43.44 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=50.2
Q ss_pred cceeeeecChh---hhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 182 RGQMVGCTPQQ---KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 182 ~~~v~~w~PQ~---~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
+..+.+-+++. .++++..+ +++-.|. .+.||+++|+|+|..+-.++++. +.+ -|.|+.+. -+.
T Consensus 256 ~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~------~d~ 321 (365)
T TIGR00236 256 RVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG------TDK 321 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC------CCH
Confidence 44555544443 45566655 7886664 37999999999999876665542 233 36776654 257
Q ss_pred HHHHHHHHHHHHHH
Q 042918 259 KKLTTRWIKCSVMK 272 (285)
Q Consensus 259 ~~l~~ai~~~~~~~ 272 (285)
++|.+++.+.+.++
T Consensus 322 ~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 322 ENITKAAKRLLTDP 335 (365)
T ss_pred HHHHHHHHHHHhCh
Confidence 88888888755443
No 73
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=91.22 E-value=0.25 Score=45.68 Aligned_cols=89 Identities=12% Similarity=0.088 Sum_probs=55.0
Q ss_pred cceeeeecChh-hhcccCccceEEec--CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRH--CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitH--gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
++.+.+++|+. ..+++.++..+=++ .|+ +.++||+++|+|+|+-+...+.. ... -|.|+.+. + +
T Consensus 281 ~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~-~-----~ 348 (397)
T TIGR03087 281 GVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA-A-----D 348 (397)
T ss_pred CeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC-C-----C
Confidence 34556888753 36777777443343 455 57999999999999987533221 112 35676665 2 4
Q ss_pred HHHHHHHHHHHHHHHH-hhccCcccc
Q 042918 258 GKKLTTRWIKCSVMKI-LKHVPWNSR 282 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~~-~~~~~~~~~ 282 (285)
.+++.++|.+.+.+.. .++...+++
T Consensus 349 ~~~la~ai~~ll~~~~~~~~~~~~ar 374 (397)
T TIGR03087 349 PADFAAAILALLANPAEREELGQAAR 374 (397)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 7889999887654433 344444443
No 74
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=91.21 E-value=0.17 Score=39.51 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=35.4
Q ss_pred eEEecCCchhHHHhHhcCceeEeccccc-------c-chhhHHHHHHHhcceEEeec
Q 042918 202 CFLRHCGWNPTTEGVSNGLAFLCWPYFA-------E-QFLNESYICAIRKVGQRFNK 250 (285)
Q Consensus 202 ~fitHgG~nS~~Ea~~~GvP~v~~P~~~-------D-Q~~na~~~~~~~gvG~~l~~ 250 (285)
..|+|||-+|++-++..+.|++..|--. | |-.-|..+.+ .+.=+....
T Consensus 68 IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~sp 123 (161)
T COG5017 68 IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSP 123 (161)
T ss_pred EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcC
Confidence 5999999999999999999999999543 2 4555666655 354444443
No 75
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=91.11 E-value=0.28 Score=44.85 Aligned_cols=90 Identities=7% Similarity=-0.053 Sum_probs=54.8
Q ss_pred ccceeeeecChhh---hcccCccceEEec-CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH-CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH-gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
+++.+.+++|+.+ +|+..++-.+-++ -| -.+++||+++|+|+|+.-. ......+.+ .+.|.....
T Consensus 280 ~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~-~~~g~~~~~----- 349 (392)
T cd03805 280 DQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVD-GETGFLCEP----- 349 (392)
T ss_pred ceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhcc-CCceEEeCC-----
Confidence 4566679999764 5777776332222 22 2578999999999998643 334444544 356776642
Q ss_pred ccHHHHHHHHHHHHHHHH-hhccCccc
Q 042918 256 SQGKKLTTRWIKCSVMKI-LKHVPWNS 281 (285)
Q Consensus 256 ~~~~~l~~ai~~~~~~~~-~~~~~~~~ 281 (285)
+.+++.++|.+...+++ .++...++
T Consensus 350 -~~~~~a~~i~~l~~~~~~~~~~~~~a 375 (392)
T cd03805 350 -TPEEFAEAMLKLANDPDLADRMGAAG 375 (392)
T ss_pred -CHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 46778888877544332 33444443
No 76
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=90.88 E-value=0.39 Score=36.79 Aligned_cols=76 Identities=12% Similarity=0.126 Sum_probs=44.4
Q ss_pred cceeeeecChh-hhcccCccceEEecC--C-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCTPQQ-KFLSHPSIACFLRHC--G-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~PQ~-~iL~h~~v~~fitHg--G-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
+....+|+++. ++++..++....+.. | -+.++|++++|+|+|+.+. + .....+. .+.|..+ .+ +
T Consensus 54 ~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~----~~~~~~~-~~~~~~~-~~-----~ 121 (135)
T PF13692_consen 54 NVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-G----AEGIVEE-DGCGVLV-AN-----D 121 (135)
T ss_dssp TEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-H----CHCHS----SEEEE--TT------
T ss_pred CEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-c----hhhheee-cCCeEEE-CC-----C
Confidence 45666777532 367788887766532 3 3899999999999999876 1 2223333 4777777 32 6
Q ss_pred HHHHHHHHHHHH
Q 042918 258 GKKLTTRWIKCS 269 (285)
Q Consensus 258 ~~~l~~ai~~~~ 269 (285)
.+++.++|.+..
T Consensus 122 ~~~l~~~i~~l~ 133 (135)
T PF13692_consen 122 PEELAEAIERLL 133 (135)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 899999998853
No 77
>PRK10307 putative glycosyl transferase; Provisional
Probab=90.58 E-value=0.53 Score=43.68 Aligned_cols=91 Identities=9% Similarity=0.067 Sum_probs=58.1
Q ss_pred cceeeeecChhh---hcccCccceEEecCCc------hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC
Q 042918 182 RGQMVGCTPQQK---FLSHPSIACFLRHCGW------NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK 252 (285)
Q Consensus 182 ~~~v~~w~PQ~~---iL~h~~v~~fitHgG~------nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~ 252 (285)
+....+|+|+.+ +|+..++..+.+..+. +.+.|++++|+|+|+-..-+.. ....+ + +.|+.++.+
T Consensus 285 ~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~~- 358 (412)
T PRK10307 285 NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEPE- 358 (412)
T ss_pred ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCCC-
Confidence 445568888765 5778888666655442 3468999999999998643311 11223 2 678877754
Q ss_pred CCCccHHHHHHHHHHHHHHH-HhhccCcccc
Q 042918 253 MGSSQGKKLTTRWIKCSVMK-ILKHVPWNSR 282 (285)
Q Consensus 253 ~~~~~~~~l~~ai~~~~~~~-~~~~~~~~~~ 282 (285)
+.+++.++|.+...++ ..++...|++
T Consensus 359 ----d~~~la~~i~~l~~~~~~~~~~~~~a~ 385 (412)
T PRK10307 359 ----SVEALVAAIAALARQALLRPKLGTVAR 385 (412)
T ss_pred ----CHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 4788999988754333 3445555544
No 78
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=90.47 E-value=0.36 Score=43.59 Aligned_cols=77 Identities=8% Similarity=-0.026 Sum_probs=47.1
Q ss_pred ceeeeecCh-hhhcccCccceEEe--cCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 183 GQMVGCTPQ-QKFLSHPSIACFLR--HCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 183 ~~v~~w~PQ-~~iL~h~~v~~fit--HgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
....++.++ .++++..++..+-+ -+.-++++||+++|+|+|+-. ....+..+.+ -..|..++.+ +.+
T Consensus 255 v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~----~~~~~e~i~~-~~~G~~~~~~-----~~~ 324 (371)
T cd04962 255 VLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASN----AGGIPEVVKH-GETGFLVDVG-----DVE 324 (371)
T ss_pred EEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeC----CCCchhhhcC-CCceEEcCCC-----CHH
Confidence 344455443 23555555533322 233469999999999999854 3445556654 3567766653 467
Q ss_pred HHHHHHHHHH
Q 042918 260 KLTTRWIKCS 269 (285)
Q Consensus 260 ~l~~ai~~~~ 269 (285)
++.+++.+.+
T Consensus 325 ~l~~~i~~l~ 334 (371)
T cd04962 325 AMAEYALSLL 334 (371)
T ss_pred HHHHHHHHHH
Confidence 7888877654
No 79
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=89.89 E-value=0.47 Score=44.65 Aligned_cols=81 Identities=9% Similarity=-0.052 Sum_probs=51.3
Q ss_pred ccceeeeecChhhh---cccC--ccceEEecC---C-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 181 TRGQMVGCTPQQKF---LSHP--SIACFLRHC---G-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~--~v~~fitHg---G-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
+++...+++|+.++ ++.. +..+|+... | -++++||+++|+|+|+-.. ..+...+.+ -..|+.+...
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~-~~~G~lv~~~ 391 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIAN-CRNGLLVDVL 391 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcC-CCcEEEeCCC
Confidence 34444577777665 4333 123466543 3 3589999999999998754 334455544 2468877754
Q ss_pred CCCCccHHHHHHHHHHHHHH
Q 042918 252 KMGSSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~~~ 271 (285)
+.+++.++|.+.+.+
T Consensus 392 -----d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 392 -----DLEAIASALEDALSD 406 (439)
T ss_pred -----CHHHHHHHHHHHHhC
Confidence 478888888775433
No 80
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=89.33 E-value=0.39 Score=43.80 Aligned_cols=80 Identities=9% Similarity=-0.066 Sum_probs=48.8
Q ss_pred eecChhh---hcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCC-CCccHHH
Q 042918 187 GCTPQQK---FLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKM-GSSQGKK 260 (285)
Q Consensus 187 ~w~PQ~~---iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~-~~~~~~~ 260 (285)
+++|+.+ ++++.++-++-++ +.-.+++||+++|+|+|+-.. ......+.+ -+.|..++.++. ..-..++
T Consensus 267 ~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~-~~~G~~~~~~~~~~~~~~~~ 341 (388)
T TIGR02149 267 KMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVD-GETGFLVPPDNSDADGFQAE 341 (388)
T ss_pred CCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhC-CCceEEcCCCCCcccchHHH
Confidence 5666543 5677776333222 223578999999999998653 345556655 367888876430 0001277
Q ss_pred HHHHHHHHHHH
Q 042918 261 LTTRWIKCSVM 271 (285)
Q Consensus 261 l~~ai~~~~~~ 271 (285)
+.++|.+.+.+
T Consensus 342 l~~~i~~l~~~ 352 (388)
T TIGR02149 342 LAKAINILLAD 352 (388)
T ss_pred HHHHHHHHHhC
Confidence 88888775443
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=89.20 E-value=0.47 Score=41.54 Aligned_cols=65 Identities=11% Similarity=0.015 Sum_probs=42.1
Q ss_pred cceeeeecCh-hhhcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 182 RGQMVGCTPQ-QKFLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 182 ~~~v~~w~PQ-~~iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
+..+.+|.++ .++++..++..+-++ +.-++++||+++|+|+|+-.. ......+.+ .+.|...+.+
T Consensus 247 ~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~ 314 (353)
T cd03811 247 RVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDC----PGPREILED-GENGLLVPVG 314 (353)
T ss_pred cEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCC----CChHHHhcC-CCceEEECCC
Confidence 3445566553 346777776444443 234689999999999998543 355566655 4778887764
No 82
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=89.05 E-value=0.89 Score=39.70 Aligned_cols=71 Identities=13% Similarity=0.032 Sum_probs=43.5
Q ss_pred hhcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 193 KFLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 193 ~iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
++++..++-.+-+. |.-++++||+++|+|+|+.+..+.+ ..+.+....|..++.. +.+++.++|.+.+.
T Consensus 248 ~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~~-----~~~~~~~~i~~ll~ 318 (348)
T cd03820 248 EYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPNG-----DVEALAEALLRLME 318 (348)
T ss_pred HHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCCC-----CHHHHHHHHHHHHc
Confidence 35555555222221 2247899999999999987544432 2333421278777653 46888888887644
Q ss_pred HH
Q 042918 271 MK 272 (285)
Q Consensus 271 ~~ 272 (285)
++
T Consensus 319 ~~ 320 (348)
T cd03820 319 DE 320 (348)
T ss_pred CH
Confidence 43
No 83
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=88.73 E-value=0.45 Score=43.06 Aligned_cols=89 Identities=9% Similarity=0.102 Sum_probs=55.2
Q ss_pred ccceeeeecChhhhcccC--ccceEEec-------CCc------hhHHHhHhcCceeEeccccccchhhHHHHHHHhcce
Q 042918 181 TRGQMVGCTPQQKFLSHP--SIACFLRH-------CGW------NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVG 245 (285)
Q Consensus 181 ~~~~v~~w~PQ~~iL~h~--~v~~fitH-------gG~------nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG 245 (285)
+++...+|+|+.++..+= +.++.... +.+ +=+.|++++|+|+|+++ +...+..+++ .++|
T Consensus 207 ~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~~G 281 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NGLG 281 (333)
T ss_pred CCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CCce
Confidence 345667999988764321 33332211 111 12677899999999974 4566777876 5899
Q ss_pred EEeecCCCCCccHHHHHHHHHHHHHHHHhhccCcccc
Q 042918 246 QRFNKTKMGSSQGKKLTTRWIKCSVMKILKHVPWNSR 282 (285)
Q Consensus 246 ~~l~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~ 282 (285)
+.++ +.+++.+++.+. ..+.+++...|++
T Consensus 282 ~~v~-------~~~el~~~l~~~-~~~~~~~m~~n~~ 310 (333)
T PRK09814 282 FVVD-------SLEELPEIIDNI-TEEEYQEMVENVK 310 (333)
T ss_pred EEeC-------CHHHHHHHHHhc-CHHHHHHHHHHHH
Confidence 9987 245677777653 3345555555544
No 84
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=88.28 E-value=0.61 Score=44.24 Aligned_cols=78 Identities=9% Similarity=-0.010 Sum_probs=48.4
Q ss_pred cceeeeecChhh---hcccCccceEEecC---C-chhHHHhHhcCceeEeccccccchhhHHHHHH--HhcceEEeecCC
Q 042918 182 RGQMVGCTPQQK---FLSHPSIACFLRHC---G-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICA--IRKVGQRFNKTK 252 (285)
Q Consensus 182 ~~~v~~w~PQ~~---iL~h~~v~~fitHg---G-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~--~~gvG~~l~~~~ 252 (285)
++...+|+|+.+ +++..++ ||.-. | -++++||+++|+|+|+-... .....+.+ .-+.|..+..+
T Consensus 313 ~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~~~G~lv~~~- 385 (465)
T PLN02871 313 PTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEGKTGFLYTPG- 385 (465)
T ss_pred CeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCCCceEEeCCC-
Confidence 345558887655 5566666 44222 2 35799999999999987542 22333332 02678877654
Q ss_pred CCCccHHHHHHHHHHHHH
Q 042918 253 MGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 253 ~~~~~~~~l~~ai~~~~~ 270 (285)
+.+++.++|.+.+.
T Consensus 386 ----d~~~la~~i~~ll~ 399 (465)
T PLN02871 386 ----DVDDCVEKLETLLA 399 (465)
T ss_pred ----CHHHHHHHHHHHHh
Confidence 36778888776543
No 85
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=87.76 E-value=1.1 Score=40.69 Aligned_cols=75 Identities=9% Similarity=-0.009 Sum_probs=47.8
Q ss_pred ceeeeecChhh---hcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 183 GQMVGCTPQQK---FLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 183 ~~v~~w~PQ~~---iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
..+.+..++.+ +++..++ ||+-.| +-+.||+++|+|+|..+-. | .++...+ .|+++.+.. +.+
T Consensus 260 v~~~~~~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~--~~~~~~~-~g~~~~~~~------~~~ 325 (363)
T cd03786 260 VLLISPLGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--T--ERPETVE-SGTNVLVGT------DPE 325 (363)
T ss_pred EEEECCcCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--C--ccchhhh-eeeEEecCC------CHH
Confidence 34444444443 4545555 999998 6677999999999998632 2 2334444 466665542 378
Q ss_pred HHHHHHHHHHHH
Q 042918 260 KLTTRWIKCSVM 271 (285)
Q Consensus 260 ~l~~ai~~~~~~ 271 (285)
+|.+++.+.+.+
T Consensus 326 ~i~~~i~~ll~~ 337 (363)
T cd03786 326 AILAAIEKLLSD 337 (363)
T ss_pred HHHHHHHHHhcC
Confidence 888888875443
No 86
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=87.25 E-value=1.4 Score=39.47 Aligned_cols=83 Identities=11% Similarity=-0.027 Sum_probs=48.3
Q ss_pred ceeeeecCh-hhhcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHH
Q 042918 183 GQMVGCTPQ-QKFLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGK 259 (285)
Q Consensus 183 ~~v~~w~PQ-~~iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~ 259 (285)
....++..+ .++++..++..+=+. |--++++||+++|+|+|+-...+ ....+.+ +.|..+..+ +.+
T Consensus 251 v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~-----~~~ 319 (358)
T cd03812 251 VIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDE-----SPE 319 (358)
T ss_pred EEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCC-----CHH
Confidence 344454322 335555555333222 33578999999999999865433 3344433 555555432 468
Q ss_pred HHHHHHHHHHHHHHhhc
Q 042918 260 KLTTRWIKCSVMKILKH 276 (285)
Q Consensus 260 ~l~~ai~~~~~~~~~~~ 276 (285)
++.++|.+...+...++
T Consensus 320 ~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 320 IWAEEILKLKSEDRRER 336 (358)
T ss_pred HHHHHHHHHHhCcchhh
Confidence 89999988655544443
No 87
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=86.67 E-value=0.91 Score=43.25 Aligned_cols=65 Identities=9% Similarity=0.009 Sum_probs=41.5
Q ss_pred chhHHHhHhcCceeEeccccccchhhHHHHHHH----h-cceEEeecCCCCCccHHHHHHHHHHHHHHH-HhhccCcccc
Q 042918 209 WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAI----R-KVGQRFNKTKMGSSQGKKLTTRWIKCSVMK-ILKHVPWNSR 282 (285)
Q Consensus 209 ~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~----~-gvG~~l~~~~~~~~~~~~l~~ai~~~~~~~-~~~~~~~~~~ 282 (285)
-++++||+++|+|+|+- |.......+.+. + ..|..+... +.+++.++|.+.+.++ ..++...|++
T Consensus 384 p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~~-----d~~~la~ai~~ll~~~~~~~~~~~~a~ 454 (475)
T cd03813 384 PLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPPA-----DPEALARAILRLLKDPELRRAMGEAGR 454 (475)
T ss_pred ChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECCC-----CHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 47899999999999994 444444555431 0 267777653 4788888888754433 2344444443
No 88
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=86.49 E-value=0.34 Score=43.18 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=45.8
Q ss_pred ccceeeeecChhh---hcccCccceEEec--CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
.+..+.+|+|+.+ +|+..++..+-+. +.-++++||+++|+|+|+-..- .....+ . ..|..+...
T Consensus 253 ~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~-~--~~~~~~~~~---- 321 (365)
T cd03809 253 DRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVA-G--DAALYFDPL---- 321 (365)
T ss_pred CeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCC----Ccccee-c--CceeeeCCC----
Confidence 3455668998764 5666666333322 2245799999999999985432 112222 2 234445433
Q ss_pred ccHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKC 268 (285)
Q Consensus 256 ~~~~~l~~ai~~~ 268 (285)
+.+++.++|.+.
T Consensus 322 -~~~~~~~~i~~l 333 (365)
T cd03809 322 -DPEALAAAIERL 333 (365)
T ss_pred -CHHHHHHHHHHH
Confidence 477888888774
No 89
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=85.80 E-value=1.1 Score=42.63 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=31.8
Q ss_pred ccceeeeecChhhhccc-CccceEE---ecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeec
Q 042918 181 TRGQMVGCTPQQKFLSH-PSIACFL---RHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNK 250 (285)
Q Consensus 181 ~~~~v~~w~PQ~~iL~h-~~v~~fi---tHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~ 250 (285)
+|..+.++.|+.+-|.. ..+..++ ...|.++++||+++|||+|++|=-.=.-..+.-+-...|+.-.+..
T Consensus 342 ~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~ 415 (468)
T PF13844_consen 342 DRIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD 415 (468)
T ss_dssp GGEEEEE---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S
T ss_pred hhEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC
Confidence 45556688887665432 2233343 3468899999999999999999322222222222233566554443
No 90
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=85.27 E-value=0.76 Score=41.04 Aligned_cols=76 Identities=9% Similarity=0.054 Sum_probs=45.8
Q ss_pred cceeeeecCh-hhhcccCccceEEec-CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 182 RGQMVGCTPQ-QKFLSHPSIACFLRH-CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 182 ~~~v~~w~PQ-~~iL~h~~v~~fitH-gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
+..+.++..+ .++|+..++-.+-++ .| -++++||+++|+|+|+- |...+...+.+ .|..+..+ +.
T Consensus 246 ~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~~~-----~~ 313 (360)
T cd04951 246 RVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVPIS-----DP 313 (360)
T ss_pred cEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeCCC-----CH
Confidence 3444454433 456777776433333 12 46789999999999974 44555555544 34444433 46
Q ss_pred HHHHHHHHHHH
Q 042918 259 KKLTTRWIKCS 269 (285)
Q Consensus 259 ~~l~~ai~~~~ 269 (285)
+++.+++.+.+
T Consensus 314 ~~~~~~i~~ll 324 (360)
T cd04951 314 EALANKIDEIL 324 (360)
T ss_pred HHHHHHHHHHH
Confidence 77888887753
No 91
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=85.02 E-value=1.9 Score=39.82 Aligned_cols=77 Identities=12% Similarity=0.077 Sum_probs=46.2
Q ss_pred ccceeeeecChhh---hcccCccceEEec-CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH-CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH-gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
++....+|+|+.+ +|+..++..+-+. -|+ .+++||+++|+|+|+-+..+ ....+.+ |.+....
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~------ 317 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE------ 317 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC------
Confidence 3445568888655 5566666333232 243 49999999999999977643 2233432 4333222
Q ss_pred ccHHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKCS 269 (285)
Q Consensus 256 ~~~~~l~~ai~~~~ 269 (285)
.+.+++.+++.+.+
T Consensus 318 ~~~~~l~~~l~~~l 331 (398)
T cd03796 318 PDVESIVRKLEEAI 331 (398)
T ss_pred CCHHHHHHHHHHHH
Confidence 24677777777643
No 92
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=85.00 E-value=2.3 Score=38.61 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=36.8
Q ss_pred chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHHHH
Q 042918 209 WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSVMK 272 (285)
Q Consensus 209 ~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~~~ 272 (285)
-++++||+++|+|+|+.-..+ .....+.+ -..|..+... +.+++.++|.+.+.+.
T Consensus 271 ~~~~lEAma~G~Pvv~s~~~~---g~~eiv~~-~~~G~lv~~~-----d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 271 PMTLLEAMSYGIPCISSDCMS---GPRDIIKP-GLNGELYTPG-----NIDEFVGKLNKVISGE 325 (359)
T ss_pred ChHHHHHHHcCCCEEEeCCCC---ChHHHccC-CCceEEECCC-----CHHHHHHHHHHHHhCc
Confidence 479999999999999875122 22234443 3568777643 5888888888754443
No 93
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=84.63 E-value=1.4 Score=42.35 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=56.6
Q ss_pred ceeeeecChhhhcccCccceEEe-cCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC-CCC-cc-
Q 042918 183 GQMVGCTPQQKFLSHPSIACFLR-HCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK-MGS-SQ- 257 (285)
Q Consensus 183 ~~v~~w~PQ~~iL~h~~v~~fit-HgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~-~~~-~~- 257 (285)
+...++.+-.++++..++-++-+ +=|+ .+++||+++|+|+|+.-.. ..+...+++ -.-|..+.... .+. -+
T Consensus 378 V~f~G~~~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~-g~nG~lv~~~~~~~d~~~~ 453 (500)
T TIGR02918 378 IHLKGHRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIED-NKNGYLIPIDEEEDDEDQI 453 (500)
T ss_pred EEEcCCCCHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccC-CCCEEEEeCCccccchhHH
Confidence 34446677777887777744434 2344 6899999999999996542 124445544 24687776321 011 11
Q ss_pred HHHHHHHHHHHHHHHHhhccCcccc
Q 042918 258 GKKLTTRWIKCSVMKILKHVPWNSR 282 (285)
Q Consensus 258 ~~~l~~ai~~~~~~~~~~~~~~~~~ 282 (285)
.+++.++|.+.+..+.+++...+++
T Consensus 454 ~~~la~~I~~ll~~~~~~~~~~~a~ 478 (500)
T TIGR02918 454 ITALAEKIVEYFNSNDIDAFHEYSY 478 (500)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHH
Confidence 6678888877554444444444443
No 94
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=84.52 E-value=1.4 Score=39.37 Aligned_cols=91 Identities=10% Similarity=-0.007 Sum_probs=53.7
Q ss_pred cceeeeecCh-hhhcccCccceEEec--CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCTPQ-QKFLSHPSIACFLRH--CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~PQ-~~iL~h~~v~~fitH--gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
++.+.+|.++ .++|+..++..+-++ -|+ ++++||+++|+|+|+.-. ......+.+ -+.|..++.+ +
T Consensus 247 ~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~-----~ 316 (355)
T cd03819 247 RVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVRP-GETGLLVPPG-----D 316 (355)
T ss_pred eEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHhC-CCceEEeCCC-----C
Confidence 3455566322 346666777554442 233 699999999999998643 334445544 3478777654 5
Q ss_pred HHHHHHHHHHHHH--HHHhhccCcccc
Q 042918 258 GKKLTTRWIKCSV--MKILKHVPWNSR 282 (285)
Q Consensus 258 ~~~l~~ai~~~~~--~~~~~~~~~~~~ 282 (285)
.+++.++|.+... .+..++...+++
T Consensus 317 ~~~l~~~i~~~~~~~~~~~~~~~~~a~ 343 (355)
T cd03819 317 AEALAQALDQILSLLPEGRAKMFAKAR 343 (355)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 7788888854322 233344444443
No 95
>PHA01633 putative glycosyl transferase group 1
Probab=84.23 E-value=0.97 Score=41.15 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=45.0
Q ss_pred eecChh---hhcccCccceEEec---CCc-hhHHHhHhcCceeEeccc------cccc------hhhHHHHHH-HhcceE
Q 042918 187 GCTPQQ---KFLSHPSIACFLRH---CGW-NPTTEGVSNGLAFLCWPY------FAEQ------FLNESYICA-IRKVGQ 246 (285)
Q Consensus 187 ~w~PQ~---~iL~h~~v~~fitH---gG~-nS~~Ea~~~GvP~v~~P~------~~DQ------~~na~~~~~-~~gvG~ 246 (285)
++.++. ++++..++ |+.- =|+ +.++||+++|+|+|+--+ .+|+ ..+.....+ ..|.|.
T Consensus 210 G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~ 287 (335)
T PHA01633 210 GHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKW 287 (335)
T ss_pred CCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCcee
Confidence 444544 34555555 4432 343 678999999999998633 3333 223332222 135566
Q ss_pred EeecCCCCCccHHHHHHHHHHH
Q 042918 247 RFNKTKMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 247 ~l~~~~~~~~~~~~l~~ai~~~ 268 (285)
.++. .+++++.++|++.
T Consensus 288 ~~~~-----~d~~~la~ai~~~ 304 (335)
T PHA01633 288 KIHK-----FQIEDMANAIILA 304 (335)
T ss_pred eecC-----CCHHHHHHHHHHH
Confidence 6553 5789999999875
No 96
>PLN02275 transferase, transferring glycosyl groups
Probab=83.35 E-value=2.4 Score=38.85 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=46.9
Q ss_pred eecChhhh---cccCccceEE--ec--CC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 187 GCTPQQKF---LSHPSIACFL--RH--CG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 187 ~w~PQ~~i---L~h~~v~~fi--tH--gG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
.|+|+.++ |+..++..+. +. -| -++++||+++|+|+|+... ..+...+.+ -+.|..+. +.
T Consensus 293 ~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~-g~~G~lv~-------~~ 360 (371)
T PLN02275 293 MWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKD-GKNGLLFS-------SS 360 (371)
T ss_pred CCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccC-CCCeEEEC-------CH
Confidence 58888766 7777774321 11 12 3679999999999999743 335556655 36788775 26
Q ss_pred HHHHHHHHH
Q 042918 259 KKLTTRWIK 267 (285)
Q Consensus 259 ~~l~~ai~~ 267 (285)
+++.++|.+
T Consensus 361 ~~la~~i~~ 369 (371)
T PLN02275 361 SELADQLLE 369 (371)
T ss_pred HHHHHHHHH
Confidence 788888876
No 97
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=76.44 E-value=7 Score=39.26 Aligned_cols=78 Identities=13% Similarity=0.074 Sum_probs=46.0
Q ss_pred cceeeeecCh-hhhcccCccceEE-ecCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccH
Q 042918 182 RGQMVGCTPQ-QKFLSHPSIACFL-RHCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQG 258 (285)
Q Consensus 182 ~~~v~~w~PQ-~~iL~h~~v~~fi-tHgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~ 258 (285)
++.+.+|.++ ..+|+..++-.+- .+-|+ ++++||+++|+|+|+-..- .+...+.+ -..|+.+..++ .+.
T Consensus 575 ~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~d-g~~GlLv~~~d---~~~ 646 (694)
T PRK15179 575 RILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQE-GVTGLTLPADT---VTA 646 (694)
T ss_pred cEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccC-CCCEEEeCCCC---CCh
Confidence 3444466543 2345555552222 24554 7899999999999997642 34445544 24688887543 455
Q ss_pred HHHHHHHHH
Q 042918 259 KKLTTRWIK 267 (285)
Q Consensus 259 ~~l~~ai~~ 267 (285)
+++.+++.+
T Consensus 647 ~~La~aL~~ 655 (694)
T PRK15179 647 PDVAEALAR 655 (694)
T ss_pred HHHHHHHHH
Confidence 566555544
No 98
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=76.21 E-value=2.3 Score=41.04 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=30.1
Q ss_pred ecCCchhHHHhHhcCceeEeccccccchh--hHHHHHHHhcceEEee
Q 042918 205 RHCGWNPTTEGVSNGLAFLCWPYFAEQFL--NESYICAIRKVGQRFN 249 (285)
Q Consensus 205 tHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~--na~~~~~~~gvG~~l~ 249 (285)
--+|..++.|+++.|||||+++ |+||. |+.-+....|+-..+.
T Consensus 517 PY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA 561 (620)
T COG3914 517 PYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA 561 (620)
T ss_pred cCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc
Confidence 3589999999999999999996 88884 3333433344433333
No 99
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=74.97 E-value=3 Score=36.78 Aligned_cols=76 Identities=9% Similarity=0.037 Sum_probs=49.8
Q ss_pred ccceeeeecChhh---hcccCccceEEec--CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLRH--CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fitH--gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
++....+++++.+ .++..++.++-+. -|+ ++++||+++|+|+|+-.. ..+...+.+ ...|..++.
T Consensus 224 ~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~----~~~~e~i~~-~~~g~l~~~---- 294 (335)
T cd03802 224 PDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRR----GAVPEVVED-GVTGFLVDS---- 294 (335)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCC----CCchhheeC-CCcEEEeCC----
Confidence 4556678998764 5677777555442 344 689999999999998754 233344433 235666542
Q ss_pred CccHHHHHHHHHHH
Q 042918 255 SSQGKKLTTRWIKC 268 (285)
Q Consensus 255 ~~~~~~l~~ai~~~ 268 (285)
.+++.+++.+.
T Consensus 295 ---~~~l~~~l~~l 305 (335)
T cd03802 295 ---VEELAAAVARA 305 (335)
T ss_pred ---HHHHHHHHHHH
Confidence 67788787763
No 100
>PLN00142 sucrose synthase
Probab=74.44 E-value=3 Score=42.44 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=33.7
Q ss_pred hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHH
Q 042918 210 NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIK 267 (285)
Q Consensus 210 nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~ 267 (285)
.+++||+++|+|+|+-.. .-....+++ -..|..++.. +.+++.++|.+
T Consensus 681 LvvLEAMA~GlPVVATdv----GG~~EIV~d-G~tG~LV~P~-----D~eaLA~aI~~ 728 (815)
T PLN00142 681 LTVVEAMTCGLPTFATCQ----GGPAEIIVD-GVSGFHIDPY-----HGDEAANKIAD 728 (815)
T ss_pred HHHHHHHHcCCCEEEcCC----CCHHHHhcC-CCcEEEeCCC-----CHHHHHHHHHH
Confidence 589999999999998644 334455554 2468888864 36777777654
No 101
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=73.00 E-value=3.3 Score=37.74 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=42.6
Q ss_pred cceeeeec--Chh---hhcccCccceEEecC---C-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC
Q 042918 182 RGQMVGCT--PQQ---KFLSHPSIACFLRHC---G-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK 252 (285)
Q Consensus 182 ~~~v~~w~--PQ~---~iL~h~~v~~fitHg---G-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~ 252 (285)
+..+.++. ++. ++++...+ |+.-. | -++++||+++|+|+|+-... .....+.+ -..|..++.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~-~~~g~~~~~-- 323 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIED-GETGFLVDT-- 323 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----Cchhhccc-CCceEEeCC--
Confidence 34445665 333 35566665 55432 2 35899999999999986533 23344544 355765542
Q ss_pred CCCccHHHHHHHHHHHHH
Q 042918 253 MGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 253 ~~~~~~~~l~~ai~~~~~ 270 (285)
.+++..+|.+.+.
T Consensus 324 -----~~~~a~~i~~ll~ 336 (372)
T cd03792 324 -----VEEAAVRILYLLR 336 (372)
T ss_pred -----cHHHHHHHHHHHc
Confidence 3445556655433
No 102
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=71.83 E-value=8.2 Score=35.26 Aligned_cols=75 Identities=9% Similarity=-0.030 Sum_probs=44.4
Q ss_pred cceeeeecCh---hhhcccCccceEEecCCchhHH-HhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCcc
Q 042918 182 RGQMVGCTPQ---QKFLSHPSIACFLRHCGWNPTT-EGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQ 257 (285)
Q Consensus 182 ~~~v~~w~PQ---~~iL~h~~v~~fitHgG~nS~~-Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~ 257 (285)
+..+++=++. ..+|+|..+ .||-.| +++ ||.+.|+|+|.+=-.++.+ .... .|..+.+. .+
T Consensus 240 ~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRq----e~r~-~~~nvlv~------~~ 304 (346)
T PF02350_consen 240 NVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQ----EGRE-RGSNVLVG------TD 304 (346)
T ss_dssp TEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-H----HHHH-TTSEEEET------SS
T ss_pred CEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCH----HHHh-hcceEEeC------CC
Confidence 4566544444 446677666 899999 788 9999999999992222221 1112 35555533 46
Q ss_pred HHHHHHHHHHHHHH
Q 042918 258 GKKLTTRWIKCSVM 271 (285)
Q Consensus 258 ~~~l~~ai~~~~~~ 271 (285)
.++|.+++++.+..
T Consensus 305 ~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 305 PEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999986544
No 103
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=71.73 E-value=3.8 Score=42.81 Aligned_cols=91 Identities=10% Similarity=0.018 Sum_probs=55.2
Q ss_pred cceeeeecChhhh---cccC--ccceEEec---CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCC
Q 042918 182 RGQMVGCTPQQKF---LSHP--SIACFLRH---CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTK 252 (285)
Q Consensus 182 ~~~v~~w~PQ~~i---L~h~--~v~~fitH---gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~ 252 (285)
++...+++|+.++ +... +..+||.- =|+ .+++||+++|+|+|+-...+ ....+.+ -..|+.++..
T Consensus 549 ~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVdP~- 622 (1050)
T TIGR02468 549 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVDPH- 622 (1050)
T ss_pred eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEECCC-
Confidence 3444578787664 3332 22346653 233 68999999999999986533 2233333 3468887754
Q ss_pred CCCccHHHHHHHHHHHHHHHH-hhccCcccc
Q 042918 253 MGSSQGKKLTTRWIKCSVMKI-LKHVPWNSR 282 (285)
Q Consensus 253 ~~~~~~~~l~~ai~~~~~~~~-~~~~~~~~~ 282 (285)
+.+++.++|.+.+.++. .++...|++
T Consensus 623 ----D~eaLA~AL~~LL~Dpelr~~m~~~gr 649 (1050)
T TIGR02468 623 ----DQQAIADALLKLVADKQLWAECRQNGL 649 (1050)
T ss_pred ----CHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 47888888887655443 344444443
No 104
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=71.67 E-value=7.8 Score=35.49 Aligned_cols=74 Identities=11% Similarity=0.082 Sum_probs=46.2
Q ss_pred ccceeeeecChhh---hcccCccceEE------ecCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeec
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFL------RHCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNK 250 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fi------tHgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~ 250 (285)
+|+...+++|..+ .|++.++..+- +.++. +-++|++++|+|+|+.++ ...+ +..+ |..+..
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~-~~~~~~ 324 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYED-EVVLIA 324 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcC-cEEEeC
Confidence 4566778988666 46777775442 22332 458999999999998763 1222 2223 333332
Q ss_pred CCCCCccHHHHHHHHHHH
Q 042918 251 TKMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 251 ~~~~~~~~~~l~~ai~~~ 268 (285)
+ +.+++.++|.+.
T Consensus 325 ~-----d~~~~~~ai~~~ 337 (373)
T cd04950 325 D-----DPEEFVAAIEKA 337 (373)
T ss_pred C-----CHHHHHHHHHHH
Confidence 2 578888888874
No 105
>PLN02949 transferase, transferring glycosyl groups
Probab=71.49 E-value=2.7 Score=40.01 Aligned_cols=94 Identities=9% Similarity=-0.005 Sum_probs=51.5
Q ss_pred ccceeeeecChhh---hcccCccceEEe-cCCc-hhHHHhHhcCceeEeccccccchhhHHHHHHH-hc-ceEEeecCCC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLR-HCGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAI-RK-VGQRFNKTKM 253 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fit-HgG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~-~g-vG~~l~~~~~ 253 (285)
+++...+++|+.+ +|++..+..+-+ +=|+ .+++||+++|+|+|+....+-- ...+.+. -| .|....
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~~---- 407 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLAT---- 407 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccCC----
Confidence 4455668888665 466666533211 1222 4899999999999997643310 0001110 01 232221
Q ss_pred CCccHHHHHHHHHHHHHH--HHhhccCcccccC
Q 042918 254 GSSQGKKLTTRWIKCSVM--KILKHVPWNSRKR 284 (285)
Q Consensus 254 ~~~~~~~l~~ai~~~~~~--~~~~~~~~~~~~~ 284 (285)
+.+++.++|.+.+.+ +..++...++++|
T Consensus 408 ---~~~~la~ai~~ll~~~~~~r~~m~~~ar~~ 437 (463)
T PLN02949 408 ---TVEEYADAILEVLRMRETERLEIAAAARKR 437 (463)
T ss_pred ---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 478888888886553 3344555555543
No 106
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=71.10 E-value=4.7 Score=35.98 Aligned_cols=48 Identities=21% Similarity=0.171 Sum_probs=31.5
Q ss_pred ccceeeeecChhhh---cccCccceEEecC--Cc-hhHHHhHhcCceeEecccc
Q 042918 181 TRGQMVGCTPQQKF---LSHPSIACFLRHC--GW-NPTTEGVSNGLAFLCWPYF 228 (285)
Q Consensus 181 ~~~~v~~w~PQ~~i---L~h~~v~~fitHg--G~-nS~~Ea~~~GvP~v~~P~~ 228 (285)
+++.+.+++|+.++ +...++-.+-++. |+ ++++||+++|+|+|+-..-
T Consensus 248 ~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~ 301 (363)
T cd04955 248 PRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNP 301 (363)
T ss_pred CcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCC
Confidence 45566799998764 4444443332322 33 5799999999999987543
No 107
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=69.37 E-value=2.6 Score=41.19 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=31.9
Q ss_pred EEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 203 FLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 203 fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
+++ -|..+.+|.++.|||||.+|.-.=--..|.-.....|+|-.+-++
T Consensus 843 plc-nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~ 890 (966)
T KOG4626|consen 843 PLC-NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKN 890 (966)
T ss_pred cCc-CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhh
Confidence 444 357788999999999999997543333333322337888766553
No 108
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=68.14 E-value=6.1 Score=28.05 Aligned_cols=63 Identities=8% Similarity=-0.124 Sum_probs=36.5
Q ss_pred cCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhc-ceEEeecCCCCCccHHHHHHHHHHHHHHH-HhhccCccc
Q 042918 206 HCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRK-VGQRFNKTKMGSSQGKKLTTRWIKCSVMK-ILKHVPWNS 281 (285)
Q Consensus 206 HgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~g-vG~~l~~~~~~~~~~~~l~~ai~~~~~~~-~~~~~~~~~ 281 (285)
++-..-+.|++++|+|+|+.+. ......+. .| -++..+ +.+++.+++...+.++ ..++.+.++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~--~~~~~~~~~-------~~~el~~~i~~ll~~~~~~~~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFE--DGEHIITYN-------DPEELAEKIEYLLENPEERRRIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcC--CCCeEEEEC-------CHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3344578999999999998864 22233332 13 233333 4778888887753333 344444444
No 109
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.59 E-value=6.4 Score=32.06 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=29.8
Q ss_pred cceeeeecChhh----hcccCccceEEecCC----chhHHHhHhcCceeEecccccc
Q 042918 182 RGQMVGCTPQQK----FLSHPSIACFLRHCG----WNPTTEGVSNGLAFLCWPYFAE 230 (285)
Q Consensus 182 ~~~v~~w~PQ~~----iL~h~~v~~fitHgG----~nS~~Ea~~~GvP~v~~P~~~D 230 (285)
+..+.+++++.+ +++..++ +++-.. -++++||+++|+|+|+-+.-+.
T Consensus 162 ~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 162 RVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 445666653322 2332444 444443 5899999999999999876543
No 110
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=67.52 E-value=2.6 Score=38.55 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=49.1
Q ss_pred hhhcccCccceEEecCCchhHHHhHhcCceeEeccccc--cchhhHHHHHHH--hcceEEe-e--------cC-CCCCcc
Q 042918 192 QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFA--EQFLNESYICAI--RKVGQRF-N--------KT-KMGSSQ 257 (285)
Q Consensus 192 ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~--DQ~~na~~~~~~--~gvG~~l-~--------~~-~~~~~~ 257 (285)
.+++++.++ .|+=+|..|+ |+...|+|||. +.-. =|+.||++++.. .|..-.+ + .+ -+...|
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t 305 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVT 305 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCC
Confidence 457766666 7888899888 99999999998 4433 588899998732 2322222 1 00 123488
Q ss_pred HHHHHHHHHH
Q 042918 258 GKKLTTRWIK 267 (285)
Q Consensus 258 ~~~l~~ai~~ 267 (285)
.+.|.+++.+
T Consensus 306 ~~~la~~i~~ 315 (347)
T PRK14089 306 VENLLKAYKE 315 (347)
T ss_pred HHHHHHHHHH
Confidence 8898888764
No 111
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=67.52 E-value=12 Score=33.19 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=39.4
Q ss_pred EEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 203 FLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 203 fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
-|+-+| .++.|++.-|+|-+++|+..-|--.|+..+. +|+-..+...
T Consensus 231 aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~ 277 (318)
T COG3980 231 AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYH 277 (318)
T ss_pred heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCC
Confidence 455554 5799999999999999999999999999977 7888777643
No 112
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=67.26 E-value=5.3 Score=40.57 Aligned_cols=49 Identities=12% Similarity=0.107 Sum_probs=35.1
Q ss_pred hhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHH
Q 042918 210 NPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 210 nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~ 268 (285)
.+++||+++|+|+|+--. .-....+.+ -..|..++.. +.+++.++|.+.
T Consensus 658 LvvLEAMAcGlPVVAT~~----GG~~EiV~d-g~tGfLVdp~-----D~eaLA~aL~~l 706 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRF----GGPLEIIQD-GVSGFHIDPY-----HGEEAAEKIVDF 706 (784)
T ss_pred HHHHHHHHcCCCEEEcCC----CCHHHHhcC-CCcEEEeCCC-----CHHHHHHHHHHH
Confidence 589999999999998643 345555654 3568888864 467777777653
No 113
>PHA01630 putative group 1 glycosyl transferase
Probab=65.23 E-value=2.8 Score=38.01 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=26.0
Q ss_pred cChhh---hcccCccceEEec-CC-chhHHHhHhcCceeEecccc
Q 042918 189 TPQQK---FLSHPSIACFLRH-CG-WNPTTEGVSNGLAFLCWPYF 228 (285)
Q Consensus 189 ~PQ~~---iL~h~~v~~fitH-gG-~nS~~Ea~~~GvP~v~~P~~ 228 (285)
+|+.+ +++..++-++-++ -| -+.++||+++|+|+|+--..
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 55444 3556666333333 22 46899999999999997543
No 114
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=59.14 E-value=14 Score=30.19 Aligned_cols=41 Identities=10% Similarity=0.221 Sum_probs=30.6
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 49 (285)
..++..++++..+| +|+||-+.. ...+|+++|+|.+.+.++
T Consensus 112 ~e~~~~i~~~~~~G---~~viVGg~~---~~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 112 EEIEAAIKQAKAEG---VDVIVGGGV---VCRLARKLGLPGVLIESG 152 (176)
T ss_dssp HHHHHHHHHHHHTT-----EEEESHH---HHHHHHHTTSEEEESS--
T ss_pred HHHHHHHHHHHHcC---CcEEECCHH---HHHHHHHcCCcEEEEEec
Confidence 46788888888764 999999964 578899999999887663
No 115
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=57.00 E-value=7.8 Score=37.53 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=43.9
Q ss_pred cceeeeecChh---hhcccCccceEEec---CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCC
Q 042918 182 RGQMVGCTPQQ---KFLSHPSIACFLRH---CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGS 255 (285)
Q Consensus 182 ~~~v~~w~PQ~---~iL~h~~v~~fitH---gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~ 255 (285)
++.+.++.... .++.+..+ +|.= =|.++.+||+++|+|+| .+....+|++ ..=|.-++
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li~------ 473 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYIID------ 473 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEeC------
Confidence 44445666632 35555555 5543 36779999999999999 4444555554 34566652
Q ss_pred ccHHHHHHHHHHH
Q 042918 256 SQGKKLTTRWIKC 268 (285)
Q Consensus 256 ~~~~~l~~ai~~~ 268 (285)
+-.++.+||...
T Consensus 474 -d~~~l~~al~~~ 485 (519)
T TIGR03713 474 -DISELLKALDYY 485 (519)
T ss_pred -CHHHHHHHHHHH
Confidence 356777777663
No 116
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=56.68 E-value=6.4 Score=38.40 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=39.5
Q ss_pred cceeeeecCh-hhhcccCccceEEe---cCC-chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 182 RGQMVGCTPQ-QKFLSHPSIACFLR---HCG-WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 182 ~~~v~~w~PQ-~~iL~h~~v~~fit---HgG-~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
++.+.+|..+ .++|+..++ |+. +-| -++++||+++|+|+|+-.. ..+...+.+ -..|..++..
T Consensus 456 ~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~d-G~nG~LVp~~ 523 (578)
T PRK15490 456 RILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIE-GVSGFILDDA 523 (578)
T ss_pred cEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHccc-CCcEEEECCC
Confidence 3444455322 234666665 443 234 4799999999999998754 345556655 3678887754
No 117
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=56.60 E-value=9.7 Score=32.94 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=26.8
Q ss_pred CccEE-EeCCcc-hhHHHHHHHcCCceEEEecchHH
Q 042918 19 KISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSSW 52 (285)
Q Consensus 19 ~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~~ 52 (285)
-||++ |+|.-. --+..-|+++|||++.+.-+.+.
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 38974 788765 57888899999999998865543
No 118
>PRK14098 glycogen synthase; Provisional
Probab=54.58 E-value=18 Score=34.69 Aligned_cols=81 Identities=10% Similarity=-0.014 Sum_probs=45.8
Q ss_pred ccceeeeecChh---hhcccCccceEEec---CCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCC
Q 042918 181 TRGQMVGCTPQQ---KFLSHPSIACFLRH---CGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMG 254 (285)
Q Consensus 181 ~~~~v~~w~PQ~---~iL~h~~v~~fitH---gG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~ 254 (285)
++..+.+..+.. .+++..++-++=+. || .+.+||+.+|+|.|+....+-.........+ -+.|..+...
T Consensus 362 ~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~G-l~~lEAma~G~ppVv~~~GGl~d~v~~~~~~-~~~G~l~~~~--- 436 (489)
T PRK14098 362 EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCG-MLQMFAMSYGTIPVAYAGGGIVETIEEVSED-KGSGFIFHDY--- 436 (489)
T ss_pred CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCch-HHHHHHHhCCCCeEEecCCCCceeeecCCCC-CCceeEeCCC---
Confidence 344555667764 46666666322222 23 3788999999888876553311110001111 2567777643
Q ss_pred CccHHHHHHHHHHH
Q 042918 255 SSQGKKLTTRWIKC 268 (285)
Q Consensus 255 ~~~~~~l~~ai~~~ 268 (285)
+.+++.++|.+.
T Consensus 437 --d~~~la~ai~~~ 448 (489)
T PRK14098 437 --TPEALVAKLGEA 448 (489)
T ss_pred --CHHHHHHHHHHH
Confidence 477888887763
No 119
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=54.50 E-value=29 Score=28.96 Aligned_cols=46 Identities=26% Similarity=0.356 Sum_probs=35.4
Q ss_pred hHHHHHHHHhhhcC-CCCccEEEeCCcchhHHHHHHHcCCceEEEec
Q 042918 3 GKLEELIEEINRQE-DEKISCVIADGAMGWAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 3 ~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 48 (285)
..|+.+++...... +..+.+||+|---..+..-|++.|||+.++..
T Consensus 12 SNlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~ 58 (200)
T COG0299 12 SNLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVLDR 58 (200)
T ss_pred ccHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEecc
Confidence 36788888775321 12478999998888899999999999987654
No 120
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=54.13 E-value=45 Score=29.09 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=35.5
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHHHHHHHcCCceEEEecch
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~ 50 (285)
..+.++++.++.. +..||+++.... .+..+|++.|++.+.+.+.+
T Consensus 204 ~~l~~l~~~ik~~---~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 204 ADLKRLIDLAKEK---GVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHHHHc---CCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 4677788877763 599999997664 67899999999998876554
No 121
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=52.46 E-value=12 Score=35.08 Aligned_cols=79 Identities=18% Similarity=0.098 Sum_probs=48.0
Q ss_pred ccceeeeecChhh---hcccCccceEEe---cCCchhHHHhHhcCceeEeccccccchhhHHHHH---HHhcceEEeecC
Q 042918 181 TRGQMVGCTPQQK---FLSHPSIACFLR---HCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYIC---AIRKVGQRFNKT 251 (285)
Q Consensus 181 ~~~~v~~w~PQ~~---iL~h~~v~~fit---HgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~---~~~gvG~~l~~~ 251 (285)
+++...+++|+.+ +|+..++..+-+ |-| .+++||+++|+|+|+--..+. ....+. + -+.|....
T Consensus 305 ~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~-g~~G~l~~-- 377 (419)
T cd03806 305 DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDG-GPTGFLAS-- 377 (419)
T ss_pred CeEEEecCCCHHHHHHHHHhCeEEEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCC-CCceEEeC--
Confidence 4556668888765 566666633322 334 488999999999998643221 111122 2 24666532
Q ss_pred CCCCccHHHHHHHHHHHHHH
Q 042918 252 KMGSSQGKKLTTRWIKCSVM 271 (285)
Q Consensus 252 ~~~~~~~~~l~~ai~~~~~~ 271 (285)
+.+++.++|.+.+.+
T Consensus 378 -----d~~~la~ai~~ll~~ 392 (419)
T cd03806 378 -----TAEEYAEAIEKILSL 392 (419)
T ss_pred -----CHHHHHHHHHHHHhC
Confidence 478888888886554
No 122
>PRK10125 putative glycosyl transferase; Provisional
Probab=51.85 E-value=11 Score=35.11 Aligned_cols=50 Identities=14% Similarity=-0.025 Sum_probs=32.1
Q ss_pred hhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecC
Q 042918 192 QKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKT 251 (285)
Q Consensus 192 ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~ 251 (285)
.|++-+|+. .-+--++++||+++|+|+|+-..-+ ....+ +. +.|..++..
T Consensus 307 aDvfV~pS~----~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~~ 356 (405)
T PRK10125 307 MDALVFSSR----VDNYPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSEE 356 (405)
T ss_pred CCEEEECCc----cccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECCC
Confidence 444445553 2233478999999999999987755 22223 32 568888764
No 123
>PRK00654 glgA glycogen synthase; Provisional
Probab=49.97 E-value=15 Score=34.77 Aligned_cols=67 Identities=6% Similarity=-0.018 Sum_probs=40.3
Q ss_pred hhcccCccceEEec-CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHH-----hcceEEeecCCCCCccHHHHHHHH
Q 042918 193 KFLSHPSIACFLRH-CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAI-----RKVGQRFNKTKMGSSQGKKLTTRW 265 (285)
Q Consensus 193 ~iL~h~~v~~fitH-gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~-----~gvG~~l~~~~~~~~~~~~l~~ai 265 (285)
.+++..++-++=++ -|+ .+.+||+++|+|+|+--..+ ....+.+. -+.|..++.. +.+++.++|
T Consensus 352 ~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG----~~e~v~~~~~~~~~~~G~lv~~~-----d~~~la~~i 422 (466)
T PRK00654 352 RIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGG----LADTVIDYNPEDGEATGFVFDDF-----NAEDLLRAL 422 (466)
T ss_pred HHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCC----ccceeecCCCCCCCCceEEeCCC-----CHHHHHHHH
Confidence 45677776333222 233 48999999999999864432 11122110 1668887754 477788887
Q ss_pred HHH
Q 042918 266 IKC 268 (285)
Q Consensus 266 ~~~ 268 (285)
.+.
T Consensus 423 ~~~ 425 (466)
T PRK00654 423 RRA 425 (466)
T ss_pred HHH
Confidence 764
No 124
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=49.31 E-value=15 Score=33.35 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=26.7
Q ss_pred CccEE-EeCCcc-hhHHHHHHHcCCceEEEecchHH
Q 042918 19 KISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSSW 52 (285)
Q Consensus 19 ~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~~ 52 (285)
.||+| |+|... ..+..-|.++|||+|.+.-+.+-
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~d 187 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCD 187 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCCC
Confidence 58975 677654 58999999999999998865543
No 125
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=45.99 E-value=19 Score=34.13 Aligned_cols=68 Identities=6% Similarity=-0.086 Sum_probs=40.6
Q ss_pred hhcccCccceEEec-CCc-hhHHHhHhcCceeEeccccccchhhHHHHHHH-----hcceEEeecCCCCCccHHHHHHHH
Q 042918 193 KFLSHPSIACFLRH-CGW-NPTTEGVSNGLAFLCWPYFAEQFLNESYICAI-----RKVGQRFNKTKMGSSQGKKLTTRW 265 (285)
Q Consensus 193 ~iL~h~~v~~fitH-gG~-nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~-----~gvG~~l~~~~~~~~~~~~l~~ai 265 (285)
.+++..++-++=+. -|+ .+.+||+++|+|+|+-...+ ....+.+. -+.|..+... +.+++.++|
T Consensus 361 ~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~-----d~~~la~~i 431 (473)
T TIGR02095 361 LIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEY-----DPGALLAAL 431 (473)
T ss_pred HHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCC-----CHHHHHHHH
Confidence 35666666333232 233 47899999999999865433 11222220 1678777753 477888887
Q ss_pred HHHH
Q 042918 266 IKCS 269 (285)
Q Consensus 266 ~~~~ 269 (285)
.+.+
T Consensus 432 ~~~l 435 (473)
T TIGR02095 432 SRAL 435 (473)
T ss_pred HHHH
Confidence 7643
No 126
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=45.79 E-value=52 Score=26.03 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=32.3
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCc--------c-hhHHHHHHHcCCceEEEecchHHH
Q 042918 4 KLEELIEEINRQEDEKISCVIADGA--------M-GWAMVAAEEMKIRRAAYLACSSWT 53 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~--------~-~~~~~~A~~lgiP~i~~~~~~~~~ 53 (285)
.+.+.++++. ..+|+||+|.. . ....++++.++.|.+.........
T Consensus 88 ~i~~~~~~l~----~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~~~ 142 (166)
T TIGR00347 88 ELSKHLRTLE----QKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKLGT 142 (166)
T ss_pred HHHHHHHHHH----hcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCCcH
Confidence 3555666664 35999999973 1 257789999999998877654333
No 127
>PHA02542 41 41 helicase; Provisional
Probab=44.39 E-value=30 Score=33.18 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=30.9
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcchh----------------------HHHHHHHcCCceEEEec
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMGW----------------------AMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~----------------------~~~~A~~lgiP~i~~~~ 48 (285)
..++..++++....+.++|+||+|.+-.. .-.+|++++||+++++-
T Consensus 285 ~~ir~~~rrlk~~~g~~~dlVvIDYLqL~~~~~~~~~~~nr~~ei~~Isr~LK~lAkel~vpVi~lsQ 352 (473)
T PHA02542 285 GHFRALLNELKLKKNFKPDVIIVDYLGICASSRLRVSSENSYTYVKAIAEELRGLAVEHDVVVWTAAQ 352 (473)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEechhhccCCcccCCCCChHHHHHHHHHHHHHHHHHhCCeEEEEEe
Confidence 35677777776533134899999964321 23568999999988763
No 128
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=43.88 E-value=42 Score=32.64 Aligned_cols=41 Identities=12% Similarity=0.219 Sum_probs=33.9
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 49 (285)
...+..+++++++| +++||.|.. +..+|+++|++.+.+.+.
T Consensus 132 ~e~~~~~~~l~~~G---~~~viG~~~---~~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 132 EDARSCVNDLRARG---IGAVVGAGL---ITDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHHHHHHHHHCC---CCEEECChH---HHHHHHHcCCceEEEecH
Confidence 46778889998865 999999974 578899999999987653
No 129
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=43.63 E-value=12 Score=28.50 Aligned_cols=32 Identities=22% Similarity=0.061 Sum_probs=25.4
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEecch
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~ 50 (285)
..|+++.+.....+..+|+++|||.+.....+
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 46778888878889999999999999866543
No 130
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=41.60 E-value=42 Score=26.88 Aligned_cols=27 Identities=7% Similarity=0.163 Sum_probs=21.0
Q ss_pred cceEEecCC------chhHHHhHhcCceeEecc
Q 042918 200 IACFLRHCG------WNPTTEGVSNGLAFLCWP 226 (285)
Q Consensus 200 v~~fitHgG------~nS~~Ea~~~GvP~v~~P 226 (285)
.+..++|.| .+++.||...++|||.+.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 445667666 457889999999999994
No 131
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=40.97 E-value=26 Score=31.05 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=31.9
Q ss_pred cCCchhHHH--hHhcCceeEeccccccchhhHHHHHHHhcce
Q 042918 206 HCGWNPTTE--GVSNGLAFLCWPYFAEQFLNESYICAIRKVG 245 (285)
Q Consensus 206 HgG~nS~~E--a~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG 245 (285)
-||||+++- |-.+||-++++=+...|..+++.-.+..|.-
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 489998763 4446999999999999999999844446776
No 132
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=40.36 E-value=22 Score=33.59 Aligned_cols=65 Identities=9% Similarity=0.047 Sum_probs=39.3
Q ss_pred hcccCccceEEe---cCCchhHHHhHhcCceeEeccccccchhhHHHHHH-----HhcceEEeecCCCCCccHHHHHHHH
Q 042918 194 FLSHPSIACFLR---HCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICA-----IRKVGQRFNKTKMGSSQGKKLTTRW 265 (285)
Q Consensus 194 iL~h~~v~~fit---HgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~-----~~gvG~~l~~~~~~~~~~~~l~~ai 265 (285)
+++..++-++=+ .|| .+.+||+++|+|+|+-..-+ ....+.+ .-|.|..+... +.+++.+++
T Consensus 367 ~~~~aDv~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg----~~e~v~~~~~~~~~~~G~~~~~~-----~~~~l~~~i 436 (476)
T cd03791 367 IYAGADFFLMPSRFEPCG-LTQMYAMRYGTVPIVRATGG----LADTVIDYNEDTGEGTGFVFEGY-----NADALLAAL 436 (476)
T ss_pred HHHhCCEEECCCCCCCCc-HHHHHHhhCCCCCEECcCCC----ccceEeCCcCCCCCCCeEEeCCC-----CHHHHHHHH
Confidence 555555532222 234 47899999999999865433 1112222 12478888754 477888888
Q ss_pred HHH
Q 042918 266 IKC 268 (285)
Q Consensus 266 ~~~ 268 (285)
.+.
T Consensus 437 ~~~ 439 (476)
T cd03791 437 RRA 439 (476)
T ss_pred HHH
Confidence 764
No 133
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=39.49 E-value=68 Score=31.71 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=28.9
Q ss_pred HHHHHHHhhhcCCCCccEE-EeCC--cchhHHHHHHHcCC--ceEEEecchH
Q 042918 5 LEELIEEINRQEDEKISCV-IADG--AMGWAMVAAEEMKI--RRAAYLACSS 51 (285)
Q Consensus 5 ~~~ll~~l~~~~~~~~d~v-I~D~--~~~~~~~~A~~lgi--P~i~~~~~~~ 51 (285)
++++.+.+.+ ++||++ .+|. |+......+++.|+ |++.|.+-+.
T Consensus 299 ~~~l~~~i~~---~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqV 347 (608)
T PRK01021 299 YRKLYKTILK---TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSI 347 (608)
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccc
Confidence 3444455544 479986 4584 55567777889996 9888765443
No 134
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=39.30 E-value=21 Score=29.67 Aligned_cols=34 Identities=18% Similarity=0.094 Sum_probs=26.3
Q ss_pred CCccEE-EeCCcc-hhHHHHHHHcCCceEEEecchH
Q 042918 18 EKISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSS 51 (285)
Q Consensus 18 ~~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~ 51 (285)
..||+| |.|..- ..+..-|.++|||++++.-+.+
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~ 161 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC 161 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 469975 666544 5888899999999999986653
No 135
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=38.84 E-value=51 Score=26.40 Aligned_cols=32 Identities=6% Similarity=-0.006 Sum_probs=19.4
Q ss_pred CCccEEEeCCcchhHH--H-H--HHHc-CCceEEEecc
Q 042918 18 EKISCVIADGAMGWAM--V-A--AEEM-KIRRAAYLAC 49 (285)
Q Consensus 18 ~~~d~vI~D~~~~~~~--~-~--A~~l-giP~i~~~~~ 49 (285)
.+||+||+-..++... . + ...+ ++|.+++.|-
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD 125 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTD 125 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcC
Confidence 3799999997654322 2 1 2224 5787776664
No 136
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=38.45 E-value=57 Score=29.86 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=24.7
Q ss_pred CCccEE-EeCC--cchhHHHHHHHc--CCceEEEecchHH
Q 042918 18 EKISCV-IADG--AMGWAMVAAEEM--KIRRAAYLACSSW 52 (285)
Q Consensus 18 ~~~d~v-I~D~--~~~~~~~~A~~l--giP~i~~~~~~~~ 52 (285)
++||++ ++|. |.......+++. |||++.|.+-+..
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvW 114 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVW 114 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccce
Confidence 479975 5684 555666677888 7999987765543
No 137
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=38.28 E-value=85 Score=28.61 Aligned_cols=67 Identities=10% Similarity=0.150 Sum_probs=40.6
Q ss_pred cChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHH
Q 042918 189 TPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIK 267 (285)
Q Consensus 189 ~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~ 267 (285)
+.-.++|.++++ ||+-|| .-..||...|+|.|.. +-++-...-+++.+ .| +..... +.+++.+.+++
T Consensus 240 vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~G--ll~~~~-----~~~ei~~~v~~ 306 (335)
T PF04007_consen 240 VDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KG--LLYHST-----DPDEIVEYVRK 306 (335)
T ss_pred CCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CC--CeEecC-----CHHHHHHHHHH
Confidence 334478888887 898777 6678999999999974 11232223344555 34 433322 45566554443
No 138
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=36.92 E-value=64 Score=28.19 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=21.7
Q ss_pred CccEEEeC-----Ccc-hhHHHHHHHcCCceEEEec
Q 042918 19 KISCVIAD-----GAM-GWAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 19 ~~d~vI~D-----~~~-~~~~~~A~~lgiP~i~~~~ 48 (285)
.||+|++- .-. .-+..+|+.||+|++++.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 38988874 222 3677889999999888664
No 139
>CHL00067 rps2 ribosomal protein S2
Probab=36.64 E-value=31 Score=29.66 Aligned_cols=35 Identities=17% Similarity=0.050 Sum_probs=26.4
Q ss_pred CCccEE-EeCCcc-hhHHHHHHHcCCceEEEecchHH
Q 042918 18 EKISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSSW 52 (285)
Q Consensus 18 ~~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~~ 52 (285)
..||+| |.|.-. ..+..-|.++|||++++.-+.+.
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~~ 196 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILDTNCD 196 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCCC
Confidence 358875 666654 48889999999999998865433
No 140
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=36.47 E-value=53 Score=28.26 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=32.6
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~ 49 (285)
..+.++++.++.. +..||+++.... -+..+|+++|++.+.+.+.
T Consensus 186 ~~l~~l~~~ik~~---~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 186 KDLAELIKLIKEN---KVKCIFTEPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp HHHHHHHHHHHHT---T-SEEEEETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred HHHHHHHHHhhhc---CCcEEEecCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 4677788777663 699999997664 5788999999999887665
No 141
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=36.33 E-value=25 Score=30.79 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=26.0
Q ss_pred CccEE-EeCCcc-hhHHHHHHHcCCceEEEecchH
Q 042918 19 KISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSS 51 (285)
Q Consensus 19 ~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~ 51 (285)
.||+| |.|.-- ..+..-|.++|||+|++.-+.+
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~ 191 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTNC 191 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCC
Confidence 58875 667654 5889999999999999886544
No 142
>PLN02501 digalactosyldiacylglycerol synthase
Probab=35.91 E-value=35 Score=34.49 Aligned_cols=43 Identities=12% Similarity=-0.011 Sum_probs=26.7
Q ss_pred eecChh-hhcccCccceEE--ecCCchhHHHhHhcCceeEeccccc
Q 042918 187 GCTPQQ-KFLSHPSIACFL--RHCGWNPTTEGVSNGLAFLCWPYFA 229 (285)
Q Consensus 187 ~w~PQ~-~iL~h~~v~~fi--tHgG~nS~~Ea~~~GvP~v~~P~~~ 229 (285)
++.+.. ++++..+|-++= +-+=-++++||+++|+|+|+--.-+
T Consensus 607 G~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG 652 (794)
T PLN02501 607 KGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS 652 (794)
T ss_pred CCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCC
Confidence 444433 356555552221 2222478999999999999986654
No 143
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=35.70 E-value=70 Score=28.91 Aligned_cols=28 Identities=21% Similarity=0.070 Sum_probs=21.2
Q ss_pred CccEEEe--CCcc-hhHHHHHHHcCCceEEE
Q 042918 19 KISCVIA--DGAM-GWAMVAAEEMKIRRAAY 46 (285)
Q Consensus 19 ~~d~vI~--D~~~-~~~~~~A~~lgiP~i~~ 46 (285)
+||+|++ |... ..+..+|+.+|||.+.+
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 6999877 4443 45778899999999864
No 144
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.53 E-value=53 Score=29.66 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=35.8
Q ss_pred eecChhhhcccCccceEEecCCc-hh-HHHhHhcCceeEeccccccchhhHH--HHHHHhcceEEeecC
Q 042918 187 GCTPQQKFLSHPSIACFLRHCGW-NP-TTEGVSNGLAFLCWPYFAEQFLNES--YICAIRKVGQRFNKT 251 (285)
Q Consensus 187 ~w~PQ~~iL~h~~v~~fitHgG~-nS-~~Ea~~~GvP~v~~P~~~DQ~~na~--~~~~~~gvG~~l~~~ 251 (285)
.|-.-.++|-|.++.. |+ ++ +-.++--|+|+|.+|-.+-|+.-.- +=..-+|..+.+-..
T Consensus 301 sqqsfadiLH~adaal-----gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~ 364 (412)
T COG4370 301 SQQSFADILHAADAAL-----GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP 364 (412)
T ss_pred eHHHHHHHHHHHHHHH-----HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC
Confidence 5555556665555411 22 22 2335667999999999999986544 333335666665543
No 145
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=34.04 E-value=94 Score=27.26 Aligned_cols=44 Identities=16% Similarity=0.193 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~ 49 (285)
..+.++++.+++. +..||+++..+. .+..+|++.|++.+.+.+.
T Consensus 207 ~~l~~l~~~ik~~---~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~l 252 (282)
T cd01017 207 KQLAELVEFVKKS---DVKYIFFEENASSKIAETLAKETGAKLLVLNPL 252 (282)
T ss_pred HHHHHHHHHHHHc---CCCEEEEeCCCChHHHHHHHHHcCCcEEEeccc
Confidence 4677888887764 599999997664 6788999999998876643
No 146
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=33.80 E-value=40 Score=27.06 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=23.0
Q ss_pred ccceEEecCC------chhHHHhHhcCceeEecc
Q 042918 199 SIACFLRHCG------WNPTTEGVSNGLAFLCWP 226 (285)
Q Consensus 199 ~v~~fitHgG------~nS~~Ea~~~GvP~v~~P 226 (285)
+.++.++|+| .+++.+|...++|||.+.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4566888877 457889999999999995
No 147
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=33.79 E-value=73 Score=29.91 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=21.5
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEec
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 48 (285)
+||++|.+. ....+|+++|+|.+.+..
T Consensus 370 ~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 370 EPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred CCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 699999986 455678999999987643
No 148
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=33.73 E-value=1.2e+02 Score=24.86 Aligned_cols=44 Identities=11% Similarity=0.147 Sum_probs=34.4
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHc-CCceEEEec
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEM-KIRRAAYLA 48 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~l-giP~i~~~~ 48 (285)
.+.+.+.+|+++| -.||+||.-.-...+.-+-..+ ++|.++|.=
T Consensus 52 av~~a~~~L~~~G-f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 52 AVARAARQLRAQG-FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHHHHHcC-CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 3556677787776 6799999987777777788888 899988753
No 149
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=33.60 E-value=42 Score=27.05 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=22.1
Q ss_pred ccceEEecCC------chhHHHhHhcCceeEecc
Q 042918 199 SIACFLRHCG------WNPTTEGVSNGLAFLCWP 226 (285)
Q Consensus 199 ~v~~fitHgG------~nS~~Ea~~~GvP~v~~P 226 (285)
+.+..++|+| .+++.||...++|||++.
T Consensus 60 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 60 RPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 4455777777 457889999999999993
No 150
>PRK12342 hypothetical protein; Provisional
Probab=33.18 E-value=74 Score=27.79 Aligned_cols=30 Identities=3% Similarity=0.066 Sum_probs=21.2
Q ss_pred CccEEEeCCc-----c-hhHHHHHHHcCCceEEEec
Q 042918 19 KISCVIADGA-----M-GWAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 19 ~~d~vI~D~~-----~-~~~~~~A~~lgiP~i~~~~ 48 (285)
.||+|++-.- . .-+..+|+.||+|++++..
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 3888887422 2 2478888888988888654
No 151
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=32.36 E-value=31 Score=29.49 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=26.0
Q ss_pred CccEE-EeCCcc-hhHHHHHHHcCCceEEEecchH
Q 042918 19 KISCV-IADGAM-GWAMVAAEEMKIRRAAYLACSS 51 (285)
Q Consensus 19 ~~d~v-I~D~~~-~~~~~~A~~lgiP~i~~~~~~~ 51 (285)
.||+| |.|.-- ..+..-|.++|||+|++.-+.+
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~ 189 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNC 189 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCC
Confidence 58875 667654 5889999999999999886544
No 152
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=32.19 E-value=31 Score=32.65 Aligned_cols=75 Identities=15% Similarity=0.177 Sum_probs=47.8
Q ss_pred cceee-eecC-h-hhhcccCccceEEecCC--chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCc
Q 042918 182 RGQMV-GCTP-Q-QKFLSHPSIACFLRHCG--WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSS 256 (285)
Q Consensus 182 ~~~v~-~w~P-Q-~~iL~h~~v~~fitHgG--~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~ 256 (285)
|..+. ++.| + .+++....+-+=++|++ .+++.||+.+|+|+++.=.. ..+...+.+ |-.+..+
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t---~~~~~~i~~----g~l~~~~----- 396 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEET---AHNRDFIAS----ENIFEHN----- 396 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecc---cCCcccccC----CceecCC-----
Confidence 33443 6666 2 35888999988899987 48999999999999987322 222223322 3333332
Q ss_pred cHHHHHHHHHHH
Q 042918 257 QGKKLTTRWIKC 268 (285)
Q Consensus 257 ~~~~l~~ai~~~ 268 (285)
+.+++.++|++.
T Consensus 397 ~~~~m~~~i~~l 408 (438)
T TIGR02919 397 EVDQLISKLKDL 408 (438)
T ss_pred CHHHHHHHHHHH
Confidence 356666666654
No 153
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=30.42 E-value=1.2e+02 Score=27.30 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=34.2
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~ 49 (285)
..+.++++.++.. +..||+++..+. .+..+|++.|++.+.+.+.
T Consensus 239 ~~l~~l~~~ik~~---~v~~If~e~~~~~~~~~~la~e~g~~v~~ldpl 284 (311)
T PRK09545 239 QRLHEIRTQLVEQ---KATCVFAEPQFRPAVIESVAKGTSVRMGTLDPL 284 (311)
T ss_pred HHHHHHHHHHHHc---CCCEEEecCCCChHHHHHHHHhcCCeEEEeccc
Confidence 4677788877653 699999998764 7889999999998776443
No 154
>PLN02846 digalactosyldiacylglycerol synthase
Probab=30.31 E-value=31 Score=32.95 Aligned_cols=39 Identities=18% Similarity=0.280 Sum_probs=27.1
Q ss_pred eecChhhhcccCccceEEecC----CchhHHHhHhcCceeEeccc
Q 042918 187 GCTPQQKFLSHPSIACFLRHC----GWNPTTEGVSNGLAFLCWPY 227 (285)
Q Consensus 187 ~w~PQ~~iL~h~~v~~fitHg----G~nS~~Ea~~~GvP~v~~P~ 227 (285)
+.....++++..++ ||.-+ =-++++||+++|+|+|+.-.
T Consensus 290 G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~ 332 (462)
T PLN02846 290 GRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANH 332 (462)
T ss_pred CCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecC
Confidence 44455556666655 65443 34789999999999999754
No 155
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=29.56 E-value=89 Score=28.80 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=19.3
Q ss_pred CccEEEeCCcchhHHHH--HHHcCCceEEEecc
Q 042918 19 KISCVIADGAMGWAMVA--AEEMKIRRAAYLAC 49 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~--A~~lgiP~i~~~~~ 49 (285)
+||+||++.-.+....+ +..+++|.+++.+-
T Consensus 104 kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td 136 (391)
T PRK13608 104 KPDLILLTFPTPVMSVLTEQFNINIPVATVMTD 136 (391)
T ss_pred CcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCC
Confidence 79999997544332222 23468998766554
No 156
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=29.05 E-value=92 Score=27.68 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=33.0
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcc-----hhHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAM-----GWAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~-----~~~~~~A~~lgiP~i~~~~~ 49 (285)
.+++++++++-++- .++=+||.|.|. .=..++|.+-+||+.++.-.
T Consensus 133 p~IKE~vR~~I~~A-~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~ 183 (284)
T PF07894_consen 133 PHIKEVVRRMIQQA-QKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDE 183 (284)
T ss_pred CCHHHHHHHHHHHh-cceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEech
Confidence 46778887775443 578899999874 23556677999999877643
No 157
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it []. It is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2X0S_A 2OLS_A 2HRO_A 2E28_A 2WQD_A 3T05_D 3T0T_D 3T07_B 2DIK_A 2FM4_A ....
Probab=28.65 E-value=90 Score=21.67 Aligned_cols=26 Identities=15% Similarity=0.305 Sum_probs=13.3
Q ss_pred ccEEEeCC--cchhHHHHHHHcCCceEE
Q 042918 20 ISCVIADG--AMGWAMVAAEEMKIRRAA 45 (285)
Q Consensus 20 ~d~vI~D~--~~~~~~~~A~~lgiP~i~ 45 (285)
..-||++. ...-+.-+|+++|||.++
T Consensus 31 ~~Giv~~~Gg~~SH~aIlAr~~giP~iv 58 (80)
T PF00391_consen 31 VAGIVTEEGGPTSHAAILARELGIPAIV 58 (80)
T ss_dssp SSEEEESSSSTTSHHHHHHHHTT-EEEE
T ss_pred eEEEEEEcCCccchHHHHHHHcCCCEEE
Confidence 33444442 233455667777777665
No 158
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=28.61 E-value=97 Score=29.96 Aligned_cols=26 Identities=12% Similarity=0.072 Sum_probs=21.5
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
+||+||.+. ....+|+++|||++.+.
T Consensus 364 ~pdliiG~~---~er~~a~~lgip~~~i~ 389 (511)
T TIGR01278 364 EPELVLGTQ---MERHSAKRLDIPCGVIS 389 (511)
T ss_pred CCCEEEECh---HHHHHHHHcCCCEEEec
Confidence 699999986 56778999999998654
No 159
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=28.55 E-value=1.6e+02 Score=27.06 Aligned_cols=68 Identities=15% Similarity=0.049 Sum_probs=44.0
Q ss_pred ccceEEecCCchhHHHhHhc------------C-----ceeEeccccccchhhHHHHHHHhcceEEee-cCCCCCccHHH
Q 042918 199 SIACFLRHCGWNPTTEGVSN------------G-----LAFLCWPYFAEQFLNESYICAIRKVGQRFN-KTKMGSSQGKK 260 (285)
Q Consensus 199 ~v~~fitHgG~nS~~Ea~~~------------G-----vP~v~~P~~~DQ~~na~~~~~~~gvG~~l~-~~~~~~~~~~~ 260 (285)
.-++++|.||--|.+-|+.. | .|++..+-.+ ++... +....+|+|++.- .++++.++.++
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~-Kaa~~lGlg~~~I~~~~~~~md~~~ 180 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIE-KAARILGLGVRKIPTDEDGRMDIEA 180 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHH-HHHHHTTSEEEEE-BBTTSSB-HHH
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHH-HhcceeeeEEEEecCCcchhhhHHH
Confidence 36789999998888776533 3 3455544322 45554 4445689997644 34457789999
Q ss_pred HHHHHHHH
Q 042918 261 LTTRWIKC 268 (285)
Q Consensus 261 l~~ai~~~ 268 (285)
++++|.+.
T Consensus 181 L~~~l~~~ 188 (373)
T PF00282_consen 181 LEKALEKD 188 (373)
T ss_dssp HHHHHHHH
T ss_pred hhhhhccc
Confidence 99999874
No 160
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=28.50 E-value=91 Score=30.21 Aligned_cols=26 Identities=8% Similarity=0.047 Sum_probs=21.2
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
+||+||.+. +...+|+++|||++.++
T Consensus 374 ~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 374 EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 699999986 46667899999997654
No 161
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=28.35 E-value=79 Score=26.46 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=25.4
Q ss_pred CccE-EEeCCcc-hhHHHHHHHcCCceEEEecch
Q 042918 19 KISC-VIADGAM-GWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 19 ~~d~-vI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 50 (285)
.||+ ||+|... .-+..-|.++|||+|++.-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 4776 5778755 588899999999999988554
No 162
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=27.58 E-value=98 Score=28.36 Aligned_cols=40 Identities=23% Similarity=0.114 Sum_probs=0.0
Q ss_pred CchHHHHHHHHhhhcCCCCccEEEe--CCcch-hHHHHHHHcCCceEEE
Q 042918 1 MRGKLEELIEEINRQEDEKISCVIA--DGAMG-WAMVAAEEMKIRRAAY 46 (285)
Q Consensus 1 ~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~-~~~~~A~~lgiP~i~~ 46 (285)
+...+.+++++. +||+|++ |.+.. .+..+|..+|||++.+
T Consensus 81 ~~~~~~~~~~~~------~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hv 123 (365)
T TIGR03568 81 TIIGFSDAFERL------KPDLVVVLGDRFEMLAAAIAAALLNIPIAHI 123 (365)
T ss_pred HHHHHHHHHHHh------CCCEEEEeCCchHHHHHHHHHHHhCCcEEEE
No 163
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=27.43 E-value=1.3e+02 Score=27.49 Aligned_cols=32 Identities=16% Similarity=-0.060 Sum_probs=25.2
Q ss_pred CCccEEEeCCcchhHHHHHHHcCCceEEEecch
Q 042918 18 EKISCVIADGAMGWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 18 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~ 50 (285)
.+||++|+= ..+.+..+|.-+|+|+|.|.=+.
T Consensus 82 ~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 82 FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCc
Confidence 369999963 34677779999999999988543
No 164
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=27.41 E-value=85 Score=26.46 Aligned_cols=32 Identities=22% Similarity=0.116 Sum_probs=25.3
Q ss_pred CccE-EEeCCcc-hhHHHHHHHcCCceEEEecch
Q 042918 19 KISC-VIADGAM-GWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 19 ~~d~-vI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 50 (285)
.||+ ||+|..- .-+..-|.++|||+|+++-+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 4786 4777654 588888999999999998554
No 165
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=27.20 E-value=1.1e+02 Score=27.77 Aligned_cols=40 Identities=28% Similarity=0.209 Sum_probs=24.5
Q ss_pred HHHHHHHHhhhcCCCCccEEEe--CCcch-hHHHHHHHcCCceEEEecc
Q 042918 4 KLEELIEEINRQEDEKISCVIA--DGAMG-WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~--D~~~~-~~~~~A~~lgiP~i~~~~~ 49 (285)
.|.+++++. +||+||+ |.+-. .+..+|..++||.+-+-..
T Consensus 58 ~~~~~~~~~------~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 58 ELADVLERE------KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHHH------T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred HHHHHHHhc------CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 345555554 5887654 66654 6788899999998876543
No 166
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=27.11 E-value=1.2e+02 Score=27.42 Aligned_cols=31 Identities=16% Similarity=0.062 Sum_probs=19.5
Q ss_pred CCccEEEe-CC--cchhHHHHHHHcCCceEEEec
Q 042918 18 EKISCVIA-DG--AMGWAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 18 ~~~d~vI~-D~--~~~~~~~~A~~lgiP~i~~~~ 48 (285)
.+||+|+. +. +.+.....|+..|||++.+..
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~ 117 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVS 117 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeC
Confidence 37999765 42 222334457788999887543
No 167
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=26.88 E-value=1.3e+02 Score=26.37 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=26.0
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcchhHH-------HHHHHcCCceEEEe
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMGWAM-------VAAEEMKIRRAAYL 47 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~-------~~A~~lgiP~i~~~ 47 (285)
+.+.++|++. .+| +++|...|++. .+|++.|||++-|-
T Consensus 56 e~l~~~l~e~------~i~-llIDATHPyAa~iS~Na~~aake~gipy~r~e 100 (257)
T COG2099 56 EGLAAFLREE------GID-LLIDATHPYAARISQNAARAAKETGIPYLRLE 100 (257)
T ss_pred HHHHHHHHHc------CCC-EEEECCChHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 4566666654 366 66787766655 45889999998864
No 168
>PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs). It binds the N-terminal GTPase-binding domain; this link is broken when GTP-bound Rho binds to the GBD and activates the protein. The addition of diaphanous activating domains (DAD) to mammalian cells induces actin filament formation, stabilises microtubules, and activates serum-response mediated transcription [].; PDB: 3O4X_H 3OBV_E 2BAP_C 2F31_B.
Probab=26.85 E-value=37 Score=15.57 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=9.0
Q ss_pred chhHHHhHhcCc
Q 042918 209 WNPTTEGVSNGL 220 (285)
Q Consensus 209 ~nS~~Ea~~~Gv 220 (285)
+.|.+||+..|.
T Consensus 3 mdsllealqtg~ 14 (15)
T PF06345_consen 3 MDSLLEALQTGS 14 (15)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHccC
Confidence 568889987763
No 169
>PLN02880 tyrosine decarboxylase
Probab=26.68 E-value=1.4e+02 Score=28.61 Aligned_cols=68 Identities=7% Similarity=-0.080 Sum_probs=42.6
Q ss_pred cceEEecCCchhHHHhHhcCc------------eeEeccccccc-hhhHHHHHHHhcce----EEeecCC--CCCccHHH
Q 042918 200 IACFLRHCGWNPTTEGVSNGL------------AFLCWPYFAEQ-FLNESYICAIRKVG----QRFNKTK--MGSSQGKK 260 (285)
Q Consensus 200 v~~fitHgG~nS~~Ea~~~Gv------------P~v~~P~~~DQ-~~na~~~~~~~gvG----~~l~~~~--~~~~~~~~ 260 (285)
-++++|.||-.|.+-|++..- +-+.+-. .|| ..-..+....+|+| +.+..++ +..++.+.
T Consensus 147 ~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~-S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~ 225 (490)
T PLN02880 147 GGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYA-SDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPEL 225 (490)
T ss_pred CceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEE-cCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHH
Confidence 468999999999888875422 2222212 333 33334455668998 3444432 45689999
Q ss_pred HHHHHHHH
Q 042918 261 LTTRWIKC 268 (285)
Q Consensus 261 l~~ai~~~ 268 (285)
|+++|.+.
T Consensus 226 L~~~i~~~ 233 (490)
T PLN02880 226 LSEAISTD 233 (490)
T ss_pred HHHHHHHH
Confidence 99999873
No 170
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=26.14 E-value=1.6e+02 Score=24.57 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=28.3
Q ss_pred HHHHHHHhhhcCCCCccEEEeCCcch---------hHHHHHHHcCCceEEEecch
Q 042918 5 LEELIEEINRQEDEKISCVIADGAMG---------WAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 5 ~~~ll~~l~~~~~~~~d~vI~D~~~~---------~~~~~A~~lgiP~i~~~~~~ 50 (285)
+.+.++++. .++|+||+|.... ...++|+.++.|.+......
T Consensus 93 i~~~~~~l~----~~~D~viIEg~gg~~~~~~~~~~~adl~~~l~~pvilV~~~~ 143 (222)
T PRK00090 93 ISAALRRLA----QQYDLVLVEGAGGLLVPLTEDLTLADLAKQLQLPVILVVGVK 143 (222)
T ss_pred HHHHHHHHH----hhCCEEEEECCCceeccCCCCCcHHHHHHHhCCCEEEEECCC
Confidence 344444443 3699999995311 45678999999998776543
No 171
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=26.07 E-value=1.5e+02 Score=27.38 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=19.7
Q ss_pred CCccEEEe-CCcc-h-hHHHHHHHcCCceEEE
Q 042918 18 EKISCVIA-DGAM-G-WAMVAAEEMKIRRAAY 46 (285)
Q Consensus 18 ~~~d~vI~-D~~~-~-~~~~~A~~lgiP~i~~ 46 (285)
.+||+||. |.-. + .....|+.+|||++.+
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~ 119 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYY 119 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEE
Confidence 37998765 6422 1 2334788999999987
No 172
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=25.83 E-value=87 Score=26.42 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=23.4
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCc---ch----hHHHHHHHcCCceEEEe
Q 042918 4 KLEELIEEINRQEDEKISCVIADGA---MG----WAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~---~~----~~~~~A~~lgiP~i~~~ 47 (285)
.+.++++++. .++|+|++|.+ .+ .+.-++-.+++|+|...
T Consensus 78 ~~l~~l~~l~----~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVA 124 (206)
T PF04493_consen 78 CILEALEKLK----NKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVA 124 (206)
T ss_dssp HHHHHHHTSS----S--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEE
T ss_pred HHHHHHHHhc----ccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEe
Confidence 4556777775 36999999964 23 33344555578888865
No 173
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.80 E-value=2.2e+02 Score=20.43 Aligned_cols=36 Identities=17% Similarity=-0.090 Sum_probs=25.4
Q ss_pred CccEE--EeCCcc----hhHHHHHHHcCCceEEEecchHHHH
Q 042918 19 KISCV--IADGAM----GWAMVAAEEMKIRRAAYLACSSWTT 54 (285)
Q Consensus 19 ~~d~v--I~D~~~----~~~~~~A~~lgiP~i~~~~~~~~~~ 54 (285)
+.|+| ++|... .-+...|++.++|++.....+...+
T Consensus 48 ~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 48 KADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred CCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHHHH
Confidence 46865 677653 3567779999999998776665544
No 174
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.74 E-value=1.6e+02 Score=26.00 Aligned_cols=44 Identities=20% Similarity=0.258 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHHHHHHHcCCceEEEecc
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~ 49 (285)
..+.++++.+++. ++.||+++.... -+..+|++.|++.+.+.+.
T Consensus 215 ~~l~~l~~~ik~~---~v~~If~e~~~~~~~~~~ia~~~g~~v~~l~~l 260 (286)
T cd01019 215 KRLAKIRKEIKEK---GATCVFAEPQFHPKIAETLAEGTGAKVGELDPL 260 (286)
T ss_pred HHHHHHHHHHHHc---CCcEEEecCCCChHHHHHHHHhcCceEEEeccc
Confidence 4677788877663 699999997764 7899999999988766543
No 175
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=25.68 E-value=1.3e+02 Score=28.31 Aligned_cols=65 Identities=9% Similarity=0.014 Sum_probs=40.6
Q ss_pred hhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEE-eecCCCCCccHHHHHHHHHH
Q 042918 193 KFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQR-FNKTKMGSSQGKKLTTRWIK 267 (285)
Q Consensus 193 ~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~-l~~~~~~~~~~~~l~~ai~~ 267 (285)
.++++... ||+. =+-|+.=|+..|||.++++. |....... .+ +|..-. ++.++ ++.+++.+.+.+
T Consensus 323 ~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~~~-~~-lg~~~~~~~~~~---l~~~~Li~~v~~ 388 (426)
T PRK10017 323 KILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSAGIM-QQ-LGLPEMAIDIRH---LLDGSLQAMVAD 388 (426)
T ss_pred HHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHHHHH-HH-cCCccEEechhh---CCHHHHHHHHHH
Confidence 45655543 4442 35577889999999999987 54444443 44 677655 44333 566666666555
No 176
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=25.64 E-value=1.2e+02 Score=29.35 Aligned_cols=26 Identities=15% Similarity=0.055 Sum_probs=21.1
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
+||+||.+. ....+|+++|||++.++
T Consensus 362 ~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 362 APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 699999876 46668999999997654
No 177
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=25.26 E-value=96 Score=27.01 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=25.2
Q ss_pred CccE-EEeCCcc-hhHHHHHHHcCCceEEEecch
Q 042918 19 KISC-VIADGAM-GWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 19 ~~d~-vI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 50 (285)
.||+ ||+|... .-+..-|.++|||+|.++-+.
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTd 151 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDTD 151 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCC
Confidence 4775 5778755 588888999999999998554
No 178
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=25.06 E-value=28 Score=28.33 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=25.9
Q ss_pred ccCccceEEecCCchhHHHhHhcCceeEeccccccchhh
Q 042918 196 SHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLN 234 (285)
Q Consensus 196 ~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~n 234 (285)
.+..+..||+.||...+++... ++|+|-+|+.+-=...
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~ 68 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILR 68 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHH
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHH
Confidence 5677788999999999999988 9999999987643333
No 179
>PRK06321 replicative DNA helicase; Provisional
Probab=24.50 E-value=1.4e+02 Score=28.54 Aligned_cols=42 Identities=17% Similarity=0.067 Sum_probs=26.7
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcchh----------------------HHHHHHHcCCceEEEe
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMGW----------------------AMVAAEEMKIRRAAYL 47 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~----------------------~~~~A~~lgiP~i~~~ 47 (285)
.++.-++++..+ ...|+||+|.+... .-.+|++++||+++++
T Consensus 323 ~i~~~~r~~~~~--~~~~lvvIDyLql~~~~~~~~~~~~r~~ei~~Isr~LK~lAkel~vpVi~ls 386 (472)
T PRK06321 323 DLRARARRMKES--YDIQFLIIDYLQLLSGSGNLRNSESRQTEISEISRMLKNLARELNIPILCLS 386 (472)
T ss_pred HHHHHHHHHHHh--cCCCEEEEcchHHcCCCCccCCcchHHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 344555555544 25899999975321 2345778889888765
No 180
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=24.35 E-value=54 Score=28.89 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=29.4
Q ss_pred EEecCCchhHHHhHh--cCceeEeccccccchhhHHHHHHHhcce
Q 042918 203 FLRHCGWNPTTEGVS--NGLAFLCWPYFAEQFLNESYICAIRKVG 245 (285)
Q Consensus 203 fitHgG~nS~~Ea~~--~GvP~v~~P~~~DQ~~na~~~~~~~gvG 245 (285)
.=-=|||+++..-++ +|+-+.++=+..+|...++.-.+..|+.
T Consensus 67 LDiGcGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~ 111 (273)
T PF02353_consen 67 LDIGCGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLE 111 (273)
T ss_dssp EEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSS
T ss_pred EEeCCCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 344589998876554 5999999999999999998655545653
No 181
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=24.03 E-value=1.3e+02 Score=25.95 Aligned_cols=45 Identities=22% Similarity=0.209 Sum_probs=31.0
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch-------------------hHHHHHHHcCCceEEEec
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG-------------------WAMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~-------------------~~~~~A~~lgiP~i~~~~ 48 (285)
..+++.++++..+. .++++||+|.+.. -...+|++++||+++++-
T Consensus 115 ~~i~~~i~~~~~~~-~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~sQ 178 (259)
T PF03796_consen 115 DDIESKIRRLKREG-KKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIALSQ 178 (259)
T ss_dssp HHHHHHHHHHHHHS-TTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred HHHHHHHHHHHhhc-cCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEccc
Confidence 35667777776653 3689999996531 134568888999888663
No 182
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=24.00 E-value=76 Score=27.52 Aligned_cols=41 Identities=7% Similarity=0.042 Sum_probs=29.3
Q ss_pred ceeeeecChhhhcccCccceEEecCCchhHHHhHhcCceeEecc
Q 042918 183 GQMVGCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWP 226 (285)
Q Consensus 183 ~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P 226 (285)
..+..-.+-.++|.+... .+|-.+ ..-+||+.+|+|+++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 334466777889988776 566332 35579999999999864
No 183
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=23.73 E-value=55 Score=26.55 Aligned_cols=28 Identities=11% Similarity=0.036 Sum_probs=15.2
Q ss_pred hhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHH
Q 042918 233 LNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKC 268 (285)
Q Consensus 233 ~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~ 268 (285)
.+-.-.++..|||+.+ |+|+|+++|.+.
T Consensus 102 ~d~~~Fe~~cGVGV~V--------T~E~I~~~V~~~ 129 (164)
T PF04558_consen 102 IDVAEFEKACGVGVVV--------TPEQIEAAVEKY 129 (164)
T ss_dssp --HHHHHHTTTTT------------HHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCeEE--------CHHHHHHHHHHH
Confidence 3334444447888865 578888888873
No 184
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=23.72 E-value=1.2e+02 Score=28.26 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=53.2
Q ss_pred eecChhhhcccCccceEEecCCchhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHH
Q 042918 187 GCTPQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWI 266 (285)
Q Consensus 187 ~w~PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~ 266 (285)
++.+-.-++.|+.+ .+|-.|- -.-||-..|+|++++=...++|. .+ + -|.-+.+. .+.+.|.++++
T Consensus 271 ~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lvg------~~~~~i~~~~~ 336 (383)
T COG0381 271 GYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILVG------TDEENILDAAT 336 (383)
T ss_pred chHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEeC------ccHHHHHHHHH
Confidence 45666667777654 6776653 24589999999999999999986 33 3 24444444 45788888888
Q ss_pred HHHHHHHhhc
Q 042918 267 KCSVMKILKH 276 (285)
Q Consensus 267 ~~~~~~~~~~ 276 (285)
+.+.++...+
T Consensus 337 ~ll~~~~~~~ 346 (383)
T COG0381 337 ELLEDEEFYE 346 (383)
T ss_pred HHhhChHHHH
Confidence 8777666555
No 185
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=23.52 E-value=1.5e+02 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=21.1
Q ss_pred ccEEEeCC--cc-----hhHHHHHHHcCCceEEEe
Q 042918 20 ISCVIADG--AM-----GWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 20 ~d~vI~D~--~~-----~~~~~~A~~lgiP~i~~~ 47 (285)
.|||++|- |+ .-...+|..+|||++++-
T Consensus 83 ~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~~G 117 (201)
T COG1435 83 VDCVLIDEAQFFDEELVYVLNELADRLGIPVICYG 117 (201)
T ss_pred cCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEEec
Confidence 68999993 33 246677999999998753
No 186
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=23.47 E-value=1.2e+02 Score=28.35 Aligned_cols=26 Identities=19% Similarity=0.061 Sum_probs=21.5
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
++|++|.. +.+..+|+++|||.+-+.
T Consensus 350 ~pDl~Ig~---s~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 350 RPDLAIGT---TPLVQYAKEKGIPALYYT 375 (416)
T ss_pred CCCEEEeC---ChhhHHHHHhCCCEEEec
Confidence 79999987 457779999999997644
No 187
>PRK04940 hypothetical protein; Provisional
Probab=23.38 E-value=2.4e+02 Score=23.26 Aligned_cols=31 Identities=16% Similarity=0.063 Sum_probs=24.9
Q ss_pred ccEEEeCCcc-hhHHHHHHHcCCceEEEecch
Q 042918 20 ISCVIADGAM-GWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 20 ~d~vI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 50 (285)
+.++|--.+- .|+.-+|+++|+|.|.+.+.-
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 5566666665 599999999999999988754
No 188
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=23.37 E-value=1.1e+02 Score=24.52 Aligned_cols=30 Identities=20% Similarity=0.087 Sum_probs=21.0
Q ss_pred CccEEEeCCcc-hh-HHHHHHHcCCceEEEec
Q 042918 19 KISCVIADGAM-GW-AMVAAEEMKIRRAAYLA 48 (285)
Q Consensus 19 ~~d~vI~D~~~-~~-~~~~A~~lgiP~i~~~~ 48 (285)
+||+||+.... .. ....-++.|||++.+..
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 69999886443 22 44556789999988753
No 189
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=23.32 E-value=1.5e+02 Score=26.86 Aligned_cols=29 Identities=17% Similarity=-0.043 Sum_probs=17.8
Q ss_pred CccEEEeCCcchhHHHH--HHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVA--AEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~--A~~lgiP~i~~~ 47 (285)
+||+||++.-......+ +..+++|.+...
T Consensus 104 ~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~ 134 (380)
T PRK13609 104 KPDIVINTFPIIAVPELKKQTGISIPTYNVL 134 (380)
T ss_pred CcCEEEEcChHHHHHHHHHhcCCCCCeEEEe
Confidence 69999998543333333 334568877544
No 190
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=23.28 E-value=1.4e+02 Score=24.87 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=24.1
Q ss_pred CccEEEeCCcc--hhHHHHHHHcCCceEEEecch
Q 042918 19 KISCVIADGAM--GWAMVAAEEMKIRRAAYLACS 50 (285)
Q Consensus 19 ~~d~vI~D~~~--~~~~~~A~~lgiP~i~~~~~~ 50 (285)
+||+||..... .-...-....+||++.+....
T Consensus 60 ~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 60 KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp --SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 69999988766 566666778899999988765
No 191
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=23.22 E-value=77 Score=24.73 Aligned_cols=28 Identities=11% Similarity=0.125 Sum_probs=22.2
Q ss_pred ccceEEecCC------chhHHHhHhcCceeEecc
Q 042918 199 SIACFLRHCG------WNPTTEGVSNGLAFLCWP 226 (285)
Q Consensus 199 ~v~~fitHgG------~nS~~Ea~~~GvP~v~~P 226 (285)
+.+++++|+| .+.+.+|...++|+|.+.
T Consensus 59 ~~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~ 92 (155)
T cd07035 59 KPGVVLVTSGPGLTNAVTGLANAYLDSIPLLVIT 92 (155)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 4556888866 467889999999999985
No 192
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=22.94 E-value=1.2e+02 Score=28.53 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=20.6
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEE
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAY 46 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 46 (285)
++|++|.+.. ...+|+++|||++-.
T Consensus 372 ~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 372 KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 5999998864 578899999998754
No 193
>PRK08506 replicative DNA helicase; Provisional
Probab=22.86 E-value=1.7e+02 Score=27.91 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=27.7
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcch-------------------hHHHHHHHcCCceEEEe
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMG-------------------WAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~-------------------~~~~~A~~lgiP~i~~~ 47 (285)
.++..++++..+. ...++||+|.+.. -...+|++++||.++++
T Consensus 288 ~I~~~~r~l~~~~-~~~~lvvIDyLql~~~~~~~~~r~~ev~~isr~LK~lAkel~ipVi~ls 349 (472)
T PRK08506 288 QVRAQLRKLKSQH-PEIGLAVIDYLQLMSGSGNFKDRHLQISEISRGLKLLARELDIPIIALS 349 (472)
T ss_pred HHHHHHHHHHHhC-CCCCEEEEcChhhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 4555566665432 2489999997521 13346888899988865
No 194
>PRK00784 cobyric acid synthase; Provisional
Probab=22.78 E-value=1.5e+02 Score=28.45 Aligned_cols=31 Identities=19% Similarity=0.146 Sum_probs=24.5
Q ss_pred CccEEEeCCc-----ch------hHHHHHHHcCCceEEEecc
Q 042918 19 KISCVIADGA-----MG------WAMVAAEEMKIRRAAYLAC 49 (285)
Q Consensus 19 ~~d~vI~D~~-----~~------~~~~~A~~lgiP~i~~~~~ 49 (285)
+.|++|+|.. ++ ...++|+.+|.|++.....
T Consensus 125 ~~D~vIVEGaGg~~~~~L~~~~~~~~dlak~l~~PVILV~~~ 166 (488)
T PRK00784 125 EYDVVVVEGAGSPAEINLRDRDIANMGFAEAADAPVILVADI 166 (488)
T ss_pred cCCEEEEECCCCccccCcccCCchhHHHHHHcCCCEEEEEeC
Confidence 5899999854 32 2779999999999987753
No 195
>PF01280 Ribosomal_L19e: Ribosomal protein L19e; InterPro: IPR000196 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents structural domain of the ribosomal protein L19 from eukaryotes, as well as L19e from archaea []. L19/L19e is absent in bacteria. L19/L19e is part of the large ribosomal subunit, whose structure has been determined in a number of eukaryotic and archaeal species []. L19/L19e is a multi-helical protein consisting of two different 3-helical domains connected by a long, partly helical linker.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3IZR_T 3O58_S 3O5H_S 3IZS_T 2WWA_J 1S1I_P 2WW9_J 2ZKR_7 4A1A_O 4A1C_O ....
Probab=22.18 E-value=26 Score=27.87 Aligned_cols=33 Identities=3% Similarity=0.033 Sum_probs=17.6
Q ss_pred HHHHHHhcce---EEeecCC----CCCccHHHHHHHHHHH
Q 042918 236 SYICAIRKVG---QRFNKTK----MGSSQGKKLTTRWIKC 268 (285)
Q Consensus 236 ~~~~~~~gvG---~~l~~~~----~~~~~~~~l~~ai~~~ 268 (285)
+++.+.+|+| |.+++++ ....|+++|.+.|++.
T Consensus 8 RLAa~vL~~G~~rVw~DP~~~~eI~~A~tR~~IR~LIk~G 47 (148)
T PF01280_consen 8 RLAASVLGCGKNRVWIDPNELEEIANAITREDIRKLIKDG 47 (148)
T ss_dssp HHHHHHHTS-GGGEEE-STTHHHHHH--SHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCcEEeCHHHHHHHHhhhhHHHHHHHHHCC
Confidence 3445567888 6787764 1235666666666653
No 196
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=22.11 E-value=84 Score=24.33 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=26.7
Q ss_pred hcccCccceEEecCCchhHHHhHhcCceeEeccc
Q 042918 194 FLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPY 227 (285)
Q Consensus 194 iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~ 227 (285)
++.||++..+||-|..-. .-++.+|.+.|++|=
T Consensus 5 v~~~p~~pi~ItEG~kKA-~al~s~G~~aIalpG 37 (130)
T PF12965_consen 5 VLDDPNIPIWITEGAKKA-GALLSQGYPAIALPG 37 (130)
T ss_pred eecCCCccEEEEechHHH-HHHHcCCceEEEeCc
Confidence 678999999999998765 234678999999984
No 197
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=22.07 E-value=2e+02 Score=27.71 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=33.2
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch----hHHHHHHHcCCceEEEe
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG----WAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~----~~~~~A~~lgiP~i~~~ 47 (285)
.++.++++.+++ .++.||+++..+. .+..+|++.|+|.+.+.
T Consensus 407 ~~L~~Li~~IK~---~~V~~IF~Epq~~~~~~~l~~IA~e~Gv~V~~l~ 452 (479)
T TIGR03772 407 ADRRRLTRTIEN---LKVPAVFLEPNLAARSTTLNEIADELGVRVCAIY 452 (479)
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCCCCchHHHHHHHHHcCCcEEeee
Confidence 467888888876 3699999998764 36899999999986653
No 198
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=21.95 E-value=2e+02 Score=24.16 Aligned_cols=45 Identities=11% Similarity=0.071 Sum_probs=31.9
Q ss_pred hHHHHHHHHhhhcC-CCCccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 3 GKLEELIEEINRQE-DEKISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 3 ~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
..|+.+++...+.. +..+-+||+|-=...+...|++.|||+..+.
T Consensus 11 sn~~al~~~~~~~~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 11 SNFRAIHDACLDGRVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred hhHHHHHHHHHcCCCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 36788888765432 1245678999655667889999999997654
No 199
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=21.70 E-value=1.2e+02 Score=28.57 Aligned_cols=26 Identities=12% Similarity=-0.088 Sum_probs=21.5
Q ss_pred CccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 19 KISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 19 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
+||++|.... ...+|+++|||..-+.
T Consensus 369 ~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 369 KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 6999998875 6668999999997654
No 200
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=21.68 E-value=53 Score=22.25 Aligned_cols=23 Identities=22% Similarity=0.259 Sum_probs=17.7
Q ss_pred ecChhhhcccCccceEEecCCch
Q 042918 188 CTPQQKFLSHPSIACFLRHCGWN 210 (285)
Q Consensus 188 w~PQ~~iL~h~~v~~fitHgG~n 210 (285)
-.|+.-+|+.+.-++.||+.|.+
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 46788899999999999999975
No 201
>PRK15411 rcsA colanic acid capsular biosynthesis activation protein A; Provisional
Probab=21.62 E-value=1.6e+02 Score=24.42 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=24.3
Q ss_pred HHHHHHHhhhcCCCCccEEEeC----CcchhHHHHHHHc-----CCceEEEecc
Q 042918 5 LEELIEEINRQEDEKISCVIAD----GAMGWAMVAAEEM-----KIRRAAYLAC 49 (285)
Q Consensus 5 ~~~ll~~l~~~~~~~~d~vI~D----~~~~~~~~~A~~l-----giP~i~~~~~ 49 (285)
..++++.+.+ .+|||||.| .-.+-+..+.+++ +++.++|+..
T Consensus 36 ~~~~~~~~~~---~~pDlvLlDl~~~l~~~~g~~~i~~i~~~~p~~~iivlt~~ 86 (207)
T PRK15411 36 VDDLAIACDS---LRPSVVFINEDCFIHDASNSQRIKQIINQHPNTLFIVFMAI 86 (207)
T ss_pred HHHHHHHHhc---cCCCEEEEeCcccCCCCChHHHHHHHHHHCCCCeEEEEECC
Confidence 3455554432 369999999 3233445555544 4667776654
No 202
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=21.49 E-value=1.4e+02 Score=27.92 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=26.9
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcchhHHHHHHHcCCceEEEe
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMGWAMVAAEEMKIRRAAYL 47 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 47 (285)
.+.++.+.+.. .+||++|.+.. ...+|+++|+|++-+.
T Consensus 359 d~~el~~~i~~---~~pdliig~~~---~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 359 DLWDLESLAKE---EPVDLLIGNSH---GRYLARDLGIPLVRVG 396 (428)
T ss_pred CHHHHHHHhhc---cCCCEEEECch---hHHHHHhcCCCEEEec
Confidence 34455555543 36999999975 5788999999997643
No 203
>COG5310 Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.42 E-value=72 Score=29.09 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=26.8
Q ss_pred ccccccccceeeeecChhhhcccCccceEEecCCchhHH
Q 042918 175 FQDGVGTRGQMVGCTPQQKFLSHPSIACFLRHCGWNPTT 213 (285)
Q Consensus 175 f~~~~~~~~~v~~w~PQ~~iL~h~~v~~fitHgG~nS~~ 213 (285)
|++..+.|..|.+|+|..- +..|..|||+-.-|+.
T Consensus 273 ~l~qpg~ntrvrswcp~~g----~qyg~lvthneaisia 307 (481)
T COG5310 273 FLEQPGANTRVRSWCPTLG----AQYGLLVTHNEAISIA 307 (481)
T ss_pred EecCCCCCceeeeeCCCcc----ceeeEEEecCceeeee
Confidence 6677778899999999874 5678899998655443
No 204
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.94 E-value=2.1e+02 Score=24.78 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=30.3
Q ss_pred hHHHHHHHHhhhcCCCCccEEEeCCcch--hHH---HHHHHcCCceEEE
Q 042918 3 GKLEELIEEINRQEDEKISCVIADGAMG--WAM---VAAEEMKIRRAAY 46 (285)
Q Consensus 3 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~---~~A~~lgiP~i~~ 46 (285)
..+.++++.++.. +..||+++.... .+. .+|++.|+|.+.+
T Consensus 193 ~~l~~l~~~ik~~---~v~~if~e~~~~~k~~~~l~~la~~~~~~v~~l 238 (264)
T cd01020 193 ADIAAFQNAIKNR---QIDALIVNPQQASSATTNITGLAKRSGVPVVEV 238 (264)
T ss_pred HHHHHHHHHHHhC---CCCEEEeCCCCCcHHHHHHHHHHHHcCCCEEee
Confidence 3567777777653 589999997764 233 5599999998765
No 205
>KOG3125 consensus Thymidine kinase [Nucleotide transport and metabolism]
Probab=20.82 E-value=1.9e+02 Score=24.47 Aligned_cols=57 Identities=9% Similarity=0.133 Sum_probs=37.6
Q ss_pred EEecCCch---------hHH-----HhHhcCceeEecc---ccccchhhHHHHHHHhcceEEeecCCCCCccHHH
Q 042918 203 FLRHCGWN---------PTT-----EGVSNGLAFLCWP---YFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKK 260 (285)
Q Consensus 203 fitHgG~n---------S~~-----Ea~~~GvP~v~~P---~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~ 260 (285)
++||+|.. +.. ++++..|-+|.+= +|+||+.-++.+.+..|.-+.+-.- ++++.|.-
T Consensus 74 i~Thdg~~~~c~~lp~a~~~s~f~~d~~~~~vdVigIDEaQFf~dl~efc~evAd~~Gk~VivagL-dgdF~Rk~ 147 (234)
T KOG3125|consen 74 IVTHDGIEMPCWALPDASFLSEFGKDALNGDVDVIGIDEAQFFGDLYEFCREVADVHGKTVIVAGL-DGDFKRKP 147 (234)
T ss_pred eEeccCCcccccccCCchhHHHHHHHHhcCcceEEEecHHHHhHHHHHHHHHHHhccCCEEEEEec-CCchhhCc
Confidence 78999872 333 3444568888774 6889999999998866766655432 23455543
No 206
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=20.45 E-value=48 Score=31.86 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=40.8
Q ss_pred hcccCccceEEecCC---chhHHHhHhcCceeEeccccccchhhHHHHHHHhcceEEeecCCCCCccHHHHHHHHHHHHH
Q 042918 194 FLSHPSIACFLRHCG---WNPTTEGVSNGLAFLCWPYFAEQFLNESYICAIRKVGQRFNKTKMGSSQGKKLTTRWIKCSV 270 (285)
Q Consensus 194 iL~h~~v~~fitHgG---~nS~~Ea~~~GvP~v~~P~~~DQ~~na~~~~~~~gvG~~l~~~~~~~~~~~~l~~ai~~~~~ 270 (285)
.|.+..-+.|+|-.| --.++||+++|.|+++. ++.--+..+++ .-.|...+.++ -....+.+++.+++.
T Consensus 361 rl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt----~~GGP~EiV~~-~~tG~l~dp~~---e~~~~~a~~~~kl~~ 432 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFGIVPIEAMACGLPVVAT----NNGGPAEIVVH-GVTGLLIDPGQ---EAVAELADALLKLRR 432 (495)
T ss_pred HHHHhcceEEecCCCCCccceeHHHHhcCCCEEEe----cCCCceEEEEc-CCcceeeCCch---HHHHHHHHHHHHHhc
Confidence 344444455666444 23688999999999975 33333444433 34566666532 122357777766544
Q ss_pred HHH
Q 042918 271 MKI 273 (285)
Q Consensus 271 ~~~ 273 (285)
+.+
T Consensus 433 ~p~ 435 (495)
T KOG0853|consen 433 DPE 435 (495)
T ss_pred CHH
Confidence 433
No 207
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=20.22 E-value=2.5e+02 Score=26.06 Aligned_cols=80 Identities=6% Similarity=0.061 Sum_probs=43.1
Q ss_pred ChhhhcccCccceEEecCCchhHHHhHhcCceeEecccc-ccchhhHHHHHHHhcceE-------EeecC-CCCCccHHH
Q 042918 190 PQQKFLSHPSIACFLRHCGWNPTTEGVSNGLAFLCWPYF-AEQFLNESYICAIRKVGQ-------RFNKT-KMGSSQGKK 260 (285)
Q Consensus 190 PQ~~iL~h~~v~~fitHgG~nS~~Ea~~~GvP~v~~P~~-~DQ~~na~~~~~~~gvG~-------~l~~~-~~~~~~~~~ 260 (285)
.-.++++..++ -+.=+| -.|+|+...|+|||..=-. .=-+.-++++....=+|+ .+-.+ =+...+.+.
T Consensus 253 ~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 253 ESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred chHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 34556665554 233333 4588999999999976221 123345555543211221 11110 033578888
Q ss_pred HHHHHHHHHHHH
Q 042918 261 LTTRWIKCSVMK 272 (285)
Q Consensus 261 l~~ai~~~~~~~ 272 (285)
|.+++.+.+.+.
T Consensus 330 i~~~~~~ll~~~ 341 (373)
T PF02684_consen 330 IAAELLELLENP 341 (373)
T ss_pred HHHHHHHHhcCH
Confidence 888887654443
No 208
>PRK05636 replicative DNA helicase; Provisional
Probab=20.10 E-value=1.1e+02 Score=29.66 Aligned_cols=42 Identities=10% Similarity=0.146 Sum_probs=27.0
Q ss_pred HHHHHHHHhhhcCCCCccEEEeCCcchh-------------------HHHHHHHcCCceEEEe
Q 042918 4 KLEELIEEINRQEDEKISCVIADGAMGW-------------------AMVAAEEMKIRRAAYL 47 (285)
Q Consensus 4 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~-------------------~~~~A~~lgiP~i~~~ 47 (285)
.++..+++++.+ ...++||+|.+..- ...+|++++||+++++
T Consensus 362 ~I~~~~r~~~~~--~~~~lvvIDYLql~~~~~~~~~r~~ei~~isr~LK~lAkel~ipVi~ls 422 (505)
T PRK05636 362 EIRSKARRLKQK--HDLKLIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDVPLIAIS 422 (505)
T ss_pred HHHHHHHHHHHh--cCCCEEEEcchHhcCCCCCCCcHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 345555665544 24899999975321 1247888899888866
Done!