Query 042919
Match_columns 428
No_of_seqs 214 out of 2512
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 10:56:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042919.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042919hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.9E-38 4.1E-43 328.6 28.7 396 21-428 162-585 (968)
2 PLN00113 leucine-rich repeat r 100.0 2E-38 4.4E-43 328.4 27.5 392 23-428 140-561 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.6E-35 3.4E-40 265.0 5.7 362 54-423 78-448 (873)
4 KOG4194 Membrane glycoprotein 100.0 2E-34 4.4E-39 257.9 4.9 363 57-426 55-428 (873)
5 KOG0444 Cytoskeletal regulator 100.0 8.2E-32 1.8E-36 243.5 -2.5 363 51-425 4-373 (1255)
6 KOG0472 Leucine-rich repeat pr 99.9 1.1E-30 2.4E-35 224.1 -10.4 363 49-427 86-541 (565)
7 KOG0444 Cytoskeletal regulator 99.9 7.5E-29 1.6E-33 224.4 -5.4 339 76-426 5-351 (1255)
8 KOG0472 Leucine-rich repeat pr 99.9 3.4E-27 7.4E-32 202.8 -9.0 340 49-403 155-541 (565)
9 KOG0618 Serine/threonine phosp 99.9 1.7E-26 3.7E-31 217.8 -7.7 353 52-425 43-463 (1081)
10 PLN03210 Resistant to P. syrin 99.9 8.4E-22 1.8E-26 205.2 26.2 340 45-402 549-905 (1153)
11 KOG0618 Serine/threonine phosp 99.9 5.4E-25 1.2E-29 207.7 0.0 265 153-424 242-510 (1081)
12 PLN03210 Resistant to P. syrin 99.9 8.8E-21 1.9E-25 197.6 27.5 339 69-425 549-904 (1153)
13 PRK15387 E3 ubiquitin-protein 99.8 7.3E-19 1.6E-23 170.9 18.5 258 128-428 202-459 (788)
14 KOG4237 Extracellular matrix p 99.8 1.1E-21 2.3E-26 168.8 -5.2 273 54-331 67-358 (498)
15 PRK15387 E3 ubiquitin-protein 99.8 1.4E-17 3.1E-22 162.0 16.8 263 78-385 201-463 (788)
16 KOG4237 Extracellular matrix p 99.7 1.1E-20 2.3E-25 162.8 -6.4 376 38-424 75-498 (498)
17 PRK15370 E3 ubiquitin-protein 99.7 4.1E-17 8.8E-22 159.8 13.6 246 153-427 179-428 (754)
18 cd00116 LRR_RI Leucine-rich re 99.7 3.9E-18 8.6E-23 155.0 4.1 269 157-426 3-319 (319)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.2E-17 2.6E-22 151.8 6.7 279 59-402 3-319 (319)
20 PRK15370 E3 ubiquitin-protein 99.7 3.3E-16 7.2E-21 153.4 11.8 246 103-380 179-428 (754)
21 KOG0617 Ras suppressor protein 99.5 7.3E-16 1.6E-20 118.1 -5.6 177 220-403 30-212 (264)
22 KOG0617 Ras suppressor protein 99.4 1.1E-14 2.4E-19 111.8 -4.4 159 49-215 28-188 (264)
23 KOG1909 Ran GTPase-activating 99.4 1.3E-13 2.8E-18 117.8 0.8 183 220-402 89-310 (382)
24 KOG3207 Beta-tubulin folding c 99.3 5.4E-13 1.2E-17 117.3 0.9 162 243-404 167-340 (505)
25 KOG3207 Beta-tubulin folding c 99.3 6.9E-13 1.5E-17 116.6 0.2 207 221-427 119-339 (505)
26 KOG1909 Ran GTPase-activating 99.3 1.8E-12 3.9E-17 110.9 2.2 183 198-380 90-311 (382)
27 PF14580 LRR_9: Leucine-rich r 99.2 7.4E-12 1.6E-16 100.4 4.2 126 270-398 17-148 (175)
28 KOG1259 Nischarin, modulator o 99.2 4.6E-12 9.9E-17 106.3 0.7 127 298-428 285-413 (490)
29 PF14580 LRR_9: Leucine-rich r 99.2 3.3E-11 7.1E-16 96.7 5.3 124 295-421 17-147 (175)
30 KOG2120 SCF ubiquitin ligase, 99.1 3.1E-12 6.7E-17 107.1 -2.8 261 10-329 100-373 (419)
31 KOG4341 F-box protein containi 99.1 1.2E-12 2.6E-17 114.5 -5.6 296 79-396 139-458 (483)
32 KOG1259 Nischarin, modulator o 99.1 6.9E-11 1.5E-15 99.3 3.1 230 166-404 173-413 (490)
33 KOG2120 SCF ubiquitin ligase, 99.0 9.7E-12 2.1E-16 104.2 -3.7 177 224-402 186-375 (419)
34 KOG4341 F-box protein containi 99.0 2.4E-11 5.2E-16 106.5 -3.1 272 154-425 140-437 (483)
35 COG4886 Leucine-rich repeat (L 98.9 3E-09 6.5E-14 99.6 9.0 197 204-408 97-295 (394)
36 KOG4658 Apoptotic ATPase [Sign 98.9 1.2E-09 2.5E-14 109.6 6.3 82 54-138 523-606 (889)
37 PF13855 LRR_8: Leucine rich r 98.9 8.6E-10 1.9E-14 72.7 3.5 60 367-426 1-61 (61)
38 COG4886 Leucine-rich repeat (L 98.9 3.9E-09 8.5E-14 98.8 8.3 197 131-336 97-294 (394)
39 KOG0532 Leucine-rich repeat (L 98.9 7.7E-11 1.7E-15 107.4 -4.4 186 205-400 80-270 (722)
40 PLN03150 hypothetical protein; 98.9 6.8E-09 1.5E-13 101.9 8.4 106 320-425 419-526 (623)
41 KOG0532 Leucine-rich repeat (L 98.8 9.6E-11 2.1E-15 106.7 -5.5 189 225-424 77-270 (722)
42 PF13855 LRR_8: Leucine rich r 98.8 3.5E-09 7.6E-14 69.8 3.1 59 320-378 2-60 (61)
43 COG5238 RNA1 Ran GTPase-activa 98.7 1.8E-09 3.9E-14 89.6 0.3 234 169-403 24-316 (388)
44 KOG0531 Protein phosphatase 1, 98.7 1.4E-09 3E-14 102.0 -0.9 195 198-403 70-268 (414)
45 KOG4658 Apoptotic ATPase [Sign 98.7 1.2E-08 2.7E-13 102.4 5.1 103 154-258 547-652 (889)
46 PLN03150 hypothetical protein; 98.7 2.4E-08 5.2E-13 98.1 6.7 85 344-428 419-504 (623)
47 KOG0531 Protein phosphatase 1, 98.7 1.9E-09 4.2E-14 101.0 -0.9 237 154-426 74-317 (414)
48 KOG2982 Uncharacterized conser 98.6 9.5E-09 2.1E-13 86.6 1.8 84 101-185 70-156 (418)
49 KOG2982 Uncharacterized conser 98.6 3.1E-08 6.8E-13 83.5 3.6 204 154-357 47-263 (418)
50 COG5238 RNA1 Ran GTPase-activa 98.5 7.9E-08 1.7E-12 80.1 3.1 161 52-212 28-226 (388)
51 KOG1859 Leucine-rich repeat pr 98.5 2.1E-09 4.6E-14 100.9 -7.5 126 273-403 165-292 (1096)
52 KOG1859 Leucine-rich repeat pr 98.4 1E-08 2.3E-13 96.4 -5.1 159 47-212 102-291 (1096)
53 KOG3665 ZYG-1-like serine/thre 98.2 8E-07 1.7E-11 87.3 3.3 80 54-136 122-204 (699)
54 KOG1644 U2-associated snRNP A' 98.2 3.9E-06 8.5E-11 67.1 6.2 104 296-399 41-149 (233)
55 KOG3665 ZYG-1-like serine/thre 98.2 7.4E-07 1.6E-11 87.6 2.3 202 52-256 58-283 (699)
56 PF12799 LRR_4: Leucine Rich r 98.1 2.2E-06 4.7E-11 51.6 3.0 36 391-427 2-37 (44)
57 KOG1947 Leucine rich repeat pr 98.0 7.2E-07 1.6E-11 86.1 -1.4 190 172-369 185-389 (482)
58 KOG1644 U2-associated snRNP A' 98.0 8.6E-06 1.9E-10 65.2 4.4 85 54-140 42-126 (233)
59 PF12799 LRR_4: Leucine Rich r 97.9 7.6E-06 1.6E-10 49.2 2.6 36 344-380 2-37 (44)
60 KOG1947 Leucine rich repeat pr 97.9 2.3E-06 4.9E-11 82.7 0.2 127 153-279 189-328 (482)
61 KOG4579 Leucine-rich repeat (L 97.9 5.5E-07 1.2E-11 67.2 -3.4 132 273-407 28-163 (177)
62 PF13306 LRR_5: Leucine rich r 97.9 3.9E-05 8.6E-10 59.3 6.3 122 291-417 6-129 (129)
63 PRK15386 type III secretion pr 97.8 0.00018 4E-09 65.5 10.6 136 197-353 49-187 (426)
64 PRK15386 type III secretion pr 97.8 0.00015 3.2E-09 66.1 9.0 134 247-401 51-188 (426)
65 PF13306 LRR_5: Leucine rich r 97.7 0.00018 3.9E-09 55.5 7.2 87 47-137 5-91 (129)
66 KOG4579 Leucine-rich repeat (L 97.6 3.7E-06 8E-11 62.9 -2.5 35 154-188 102-136 (177)
67 KOG2123 Uncharacterized conser 97.4 1E-05 2.2E-10 68.1 -3.1 98 273-373 20-123 (388)
68 KOG2123 Uncharacterized conser 97.4 5.8E-06 1.3E-10 69.5 -4.6 82 297-380 19-101 (388)
69 KOG2739 Leucine-rich acidic nu 97.4 0.00011 2.4E-09 61.6 2.3 104 315-421 39-150 (260)
70 KOG2739 Leucine-rich acidic nu 97.2 0.00015 3.3E-09 60.8 1.6 83 298-380 44-129 (260)
71 KOG4308 LRR-containing protein 95.6 0.00018 3.8E-09 68.0 -8.3 187 177-383 89-306 (478)
72 KOG4308 LRR-containing protein 95.4 0.00012 2.6E-09 69.2 -10.2 179 225-403 89-303 (478)
73 KOG3864 Uncharacterized conser 95.4 0.001 2.2E-08 53.7 -3.5 85 319-403 101-189 (221)
74 KOG3864 Uncharacterized conser 95.3 0.0019 4.1E-08 52.2 -2.2 81 298-378 102-187 (221)
75 PF00560 LRR_1: Leucine Rich R 95.2 0.0085 1.8E-07 29.7 0.7 21 391-412 1-21 (22)
76 PF00560 LRR_1: Leucine Rich R 93.2 0.039 8.4E-07 27.3 0.7 17 154-170 2-18 (22)
77 PF13504 LRR_7: Leucine rich r 92.5 0.095 2.1E-06 24.0 1.5 15 154-168 3-17 (17)
78 PF13516 LRR_6: Leucine Rich r 91.1 0.074 1.6E-06 26.9 0.2 20 319-338 2-21 (24)
79 KOG0473 Leucine-rich repeat pr 87.6 0.018 3.8E-07 47.8 -5.5 83 341-426 40-123 (326)
80 smart00369 LRR_TYP Leucine-ric 87.0 0.53 1.1E-05 24.2 1.7 13 391-403 3-15 (26)
81 smart00370 LRR Leucine-rich re 87.0 0.53 1.1E-05 24.2 1.7 13 391-403 3-15 (26)
82 smart00367 LRR_CC Leucine-rich 78.5 1.5 3.3E-05 22.5 1.4 15 413-427 1-16 (26)
83 smart00365 LRR_SD22 Leucine-ri 76.7 2.5 5.5E-05 21.8 1.9 13 414-426 2-14 (26)
84 smart00368 LRR_RI Leucine rich 75.2 2 4.3E-05 22.6 1.3 20 319-338 2-21 (28)
85 KOG0473 Leucine-rich repeat pr 71.5 0.17 3.7E-06 42.2 -5.0 82 297-380 42-124 (326)
86 KOG3763 mRNA export factor TAP 69.9 3 6.4E-05 39.8 2.0 66 99-164 215-282 (585)
87 smart00364 LRR_BAC Leucine-ric 69.8 3.5 7.7E-05 21.3 1.4 18 390-408 2-19 (26)
88 KOG3763 mRNA export factor TAP 64.5 4.1 8.8E-05 38.9 1.7 12 369-380 272-283 (585)
89 KOG4242 Predicted myosin-I-bin 61.2 53 0.0011 31.2 8.0 105 320-424 355-478 (553)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=328.62 Aligned_cols=396 Identities=29% Similarity=0.417 Sum_probs=271.9
Q ss_pred cccceEEEeecchhcccCCcceeeeecccccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhcc
Q 042919 21 QKGSITYLSVEDSCRKTNGVPLTVFVNTGICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIAN 100 (428)
Q Consensus 21 ~~~~~~~l~~~~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~ 100 (428)
...+++++.+.+ +. +...+|.+++++++|++|++++|.+.+..|..+.++++|+.|++++|.+.+..|..+..
T Consensus 162 ~l~~L~~L~L~~-n~------l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 234 (968)
T PLN00113 162 SFSSLKVLDLGG-NV------LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG 234 (968)
T ss_pred cCCCCCEEECcc-Cc------ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc
Confidence 346778888876 32 23344566778888888888888877777777888888888888888777667777778
Q ss_pred CCCCcEEeCCCCccCCccccccccCCCCCcEEEccCCcccc-ccCCCCCCCcCCccEEEcCCCCC-ccchhHhhhCCCcc
Q 042919 101 IKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKI-ETEEFPGLPEYQLKALNLRNCSL-QALPSILLQQLDLR 178 (428)
Q Consensus 101 l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 178 (428)
+++|++|++++|.+.+.. +..++.+++|++|++++|.+.. .+..+...+ +|+.|++++|.+ ..+|..+..+++|+
T Consensus 235 l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 311 (968)
T PLN00113 235 LTSLNHLDLVYNNLTGPI-PSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQ--KLISLDLSDNSLSGEIPELVIQLQNLE 311 (968)
T ss_pred CCCCCEEECcCceecccc-ChhHhCCCCCCEEECcCCeeeccCchhHhhcc--CcCEEECcCCeeccCCChhHcCCCCCc
Confidence 888888888887776543 3467777777777777776532 233333333 377777777766 35566666677777
Q ss_pred EEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCC-cccCCCCCCCccEEecCCCccccCCCchhhh------------
Q 042919 179 FIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSG-NFQLPSSKHDLLRLDISHNKFSCQLPGNMGK------------ 245 (428)
Q Consensus 179 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~------------ 245 (428)
.|++++|.+....+..+ ..+++|+.|++++|.+.+ .+.....+++|+.|++++|.+.+..+..+..
T Consensus 312 ~L~l~~n~~~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n 390 (968)
T PLN00113 312 ILHLFSNNFTGKIPVAL-TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN 390 (968)
T ss_pred EEECCCCccCCcCChhH-hcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCC
Confidence 77777776665555444 456667777776666553 2222344555666666665554444443332
Q ss_pred -----------cCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc
Q 042919 246 -----------ILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV 314 (428)
Q Consensus 246 -----------~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 314 (428)
.+++|+.|++.+|.+.+..|..+..++.|+.+++++|.+.+..+.. +..+++|+.|++++|.+....+
T Consensus 391 ~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~n~~~~~~p 469 (968)
T PLN00113 391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSR-KWDMPSLQMLSLARNKFFGGLP 469 (968)
T ss_pred EecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChh-hccCCCCcEEECcCceeeeecC
Confidence 1445555555555554444555555555555555555555333322 3345666666666666553332
Q ss_pred -cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccC
Q 042919 315 -FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSL 392 (428)
Q Consensus 315 -~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L 392 (428)
....++|+.|++++|.+.+..+..+.++++|+.|++++|.+.+.+|..+.++++|+.|+|++|.+++..+..+ .+++|
T Consensus 470 ~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 549 (968)
T PLN00113 470 DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVL 549 (968)
T ss_pred cccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccC
Confidence 3345678888888888877777788888899999999999888888888899999999999999988888777 78899
Q ss_pred ceEEccCCcCCccCCcccccCCCCCEEECCCCccCC
Q 042919 393 RRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEFSG 428 (428)
Q Consensus 393 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 428 (428)
+.|++++|++.+..|..+..++.|+.|++++|+++|
T Consensus 550 ~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 550 SQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 999999999988889999999999999999998875
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-38 Score=328.39 Aligned_cols=392 Identities=32% Similarity=0.476 Sum_probs=306.7
Q ss_pred cceEEEeecchhcccCCcceeeeecccccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCC
Q 042919 23 GSITYLSVEDSCRKTNGVPLTVFVNTGICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIK 102 (428)
Q Consensus 23 ~~~~~l~~~~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~ 102 (428)
..++++.+.. +. +....|..++++++|++|++++|.+.+..|..+.++++|++|++++|.+.+..|..+.+++
T Consensus 140 ~~L~~L~Ls~-n~------~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 212 (968)
T PLN00113 140 PNLETLDLSN-NM------LSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMK 212 (968)
T ss_pred CCCCEEECcC-Cc------ccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcC
Confidence 4577777766 22 3344567889999999999999999888999999999999999999999888899999999
Q ss_pred CCcEEeCCCCccCCccccccccCCCCCcEEEccCCccc-cccCCCCCCCcCCccEEEcCCCCC-ccchhHhhhCCCccEE
Q 042919 103 SLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVK-IETEEFPGLPEYQLKALNLRNCSL-QALPSILLQQLDLRFI 180 (428)
Q Consensus 103 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L 180 (428)
+|++|++++|.+.+..+ ..++++++|++|++++|... ..+..+...+ +|++|++++|.+ ..+|..+..+++|+.|
T Consensus 213 ~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 289 (968)
T PLN00113 213 SLKWIYLGYNNLSGEIP-YEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK--NLQYLFLYQNKLSGPIPPSIFSLQKLISL 289 (968)
T ss_pred CccEEECcCCccCCcCC-hhHhcCCCCCEEECcCceeccccChhHhCCC--CCCEEECcCCeeeccCchhHhhccCcCEE
Confidence 99999999999876533 57899999999999998774 3444555554 499999999988 4678889999999999
Q ss_pred EccCCcCCCCCchhhhhcCCCCCEEEecCCccCCc-ccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCC
Q 042919 181 DLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGN-FQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENG 259 (428)
Q Consensus 181 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 259 (428)
++++|.+....+..+ ..+++|+.|++++|.+.+. ......+++|+.|++++|.+.+..+..+.. +++|+.|++++|.
T Consensus 290 ~Ls~n~l~~~~p~~~-~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-~~~L~~L~Ls~n~ 367 (968)
T PLN00113 290 DLSDNSLSGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK-HNNLTVLDLSTNN 367 (968)
T ss_pred ECcCCeeccCCChhH-cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhC-CCCCcEEECCCCe
Confidence 999999887777665 6899999999999988753 334567899999999999998788877766 8899999999998
Q ss_pred CCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc--cC---------------------
Q 042919 260 FEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV--FP--------------------- 316 (428)
Q Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~~--------------------- 316 (428)
+.+..+..+..+++|+.+++.+|.+.+..+.. +..+++|+.|++.+|.+.+..+ +.
T Consensus 368 l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~-~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 446 (968)
T PLN00113 368 LTGEIPEGLCSSGNLFKLILFSNSLEGEIPKS-LGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINS 446 (968)
T ss_pred eEeeCChhHhCcCCCCEEECcCCEecccCCHH-HhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccCh
Confidence 87666766666666777777766665444433 3455666666666655543221 33
Q ss_pred ---CCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccC
Q 042919 317 ---NSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSL 392 (428)
Q Consensus 317 ---~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L 392 (428)
.+++|+.|++++|.+.+..+..+ ..++|+.|++++|++++..|..+.++++|+.|++++|.+.+..+..+ .+++|
T Consensus 447 ~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 525 (968)
T PLN00113 447 RKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKL 525 (968)
T ss_pred hhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCC
Confidence 44555555555555544333332 34667777777777777777778888888888998888888777777 78889
Q ss_pred ceEEccCCcCCccCCcccccCCCCCEEECCCCccCC
Q 042919 393 RRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEFSG 428 (428)
Q Consensus 393 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 428 (428)
+.|++++|.+++..|..++.+++|+.|++++|+++|
T Consensus 526 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 561 (968)
T PLN00113 526 VSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561 (968)
T ss_pred CEEECCCCcccccCChhHhCcccCCEEECCCCcccc
Confidence 999999999988888888889999999999998876
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=265.02 Aligned_cols=362 Identities=26% Similarity=0.257 Sum_probs=286.5
Q ss_pred CCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEE
Q 042919 54 KNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFK 133 (428)
Q Consensus 54 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 133 (428)
+.-+.|++++|++..+.+..|.++++|+.+++..|.++ ..|.......+|+.|++.+|.|..+.. +.++.++.|+.||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~s-e~L~~l~alrslD 155 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTS-EELSALPALRSLD 155 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccH-HHHHhHhhhhhhh
Confidence 34567999999998888888999999999999999887 667766666789999999998887755 6788889999999
Q ss_pred ccCCccc-cccCCCCCCCcCCccEEEcCCCCCccch-hHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCc
Q 042919 134 LSNSLVK-IETEEFPGLPEYQLKALNLRNCSLQALP-SILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNS 211 (428)
Q Consensus 134 l~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~~~~l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 211 (428)
++.|.+. +....|+... ++++|++++|.|..+. ..+..+.+|..|.++.|+++ .+|...|+++++|+.|++..|.
T Consensus 156 LSrN~is~i~~~sfp~~~--ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ 232 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKV--NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNR 232 (873)
T ss_pred hhhchhhcccCCCCCCCC--CceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccccc
Confidence 9988774 3444454433 4999999999887664 34556668899999999988 5666666789999999999888
Q ss_pred cCCc-ccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCch
Q 042919 212 LSGN-FQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPR 290 (428)
Q Consensus 212 ~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 290 (428)
+... .-....+++|+.|.+..|.+. .+.+..+-++.+++.|++..|.+......++.++++|+.|+++.|.+. .+..
T Consensus 233 irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~-rih~ 310 (873)
T KOG4194|consen 233 IRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ-RIHI 310 (873)
T ss_pred eeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh-eeec
Confidence 7653 335567888888888888886 444554445888899999888888777788888889999999888876 5555
Q ss_pred hhhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCccccc---CCcccCC
Q 042919 291 QFLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQ---IPPWFGN 365 (428)
Q Consensus 291 ~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~---~~~~~~~ 365 (428)
...+.+++|+.|+++.|.+..... +..+..|++|.|+.|.++.....+|..+.+|++|+|++|.+... ....|.+
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 556678889999998888876544 77788888899988888877777788888899999988876532 3446777
Q ss_pred CCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCC
Q 042919 366 LSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRD 423 (428)
Q Consensus 366 ~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 423 (428)
+++|++|++.||++..+...++ .+++|+.|++.+|.|-.+.|.+|..+ +|++|.+..
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 8889999999998887777777 88899999999998887888888888 888777654
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=257.95 Aligned_cols=363 Identities=25% Similarity=0.314 Sum_probs=299.5
Q ss_pred cEEeccCCcCCCCchHhhhcC--CCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEEc
Q 042919 57 VELDLSKNNLYGHLSPCLSNL--THIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKL 134 (428)
Q Consensus 57 ~~L~l~~~~~~~~~~~~~~~l--~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 134 (428)
+.|+.++..+.......+... +.-+.|++++|.+....+..|.++++|+++++.+|.++.+ +...+...+|++|++
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~I--P~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRI--PRFGHESGHLEKLDL 132 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhc--ccccccccceeEEee
Confidence 456666665553323333332 3556799999999988888999999999999999998877 334455567999999
Q ss_pred cCCcc-ccccCCCCCCCcCCccEEEcCCCCCccchhHhhhC-CCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCcc
Q 042919 135 SNSLV-KIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQ-LDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSL 212 (428)
Q Consensus 135 ~~~~~-~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 212 (428)
.+|.+ .+....+...+. |+.++++.|.+.+++..-+.- .+++.|++++|.++......| ..+.+|..|.+++|++
T Consensus 133 ~~N~I~sv~se~L~~l~a--lrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F-~~lnsL~tlkLsrNri 209 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPA--LRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHF-DSLNSLLTLKLSRNRI 209 (873)
T ss_pred eccccccccHHHHHhHhh--hhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccc-cccchheeeecccCcc
Confidence 99988 445555666665 999999999998887654444 599999999999996555444 6888999999999999
Q ss_pred CCcccCCC-CCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchh
Q 042919 213 SGNFQLPS-SKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQ 291 (428)
Q Consensus 213 ~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~ 291 (428)
+..+.-.. .+++|+.|++..|++. ..-...++++++|+.|.+..|++.......|..+.++++|++..|++. .....
T Consensus 210 ttLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~-~vn~g 287 (873)
T KOG4194|consen 210 TTLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ-AVNEG 287 (873)
T ss_pred cccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh-hhhcc
Confidence 88655444 5999999999999985 333344566999999999999998888888999999999999999987 55556
Q ss_pred hhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCC
Q 042919 292 FLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGL 369 (428)
Q Consensus 292 ~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L 369 (428)
.+-++.+|+.|+++.|.|..... ++.+++|++|+|+.|.++...+..|..+..|++|.|+.|.++......|..+.+|
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL 367 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL 367 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh
Confidence 66789999999999999986544 7788999999999999998888999999999999999999987777788999999
Q ss_pred cEEeCCCCcCCcCCCC---cc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCcc
Q 042919 370 QFLDISENQLCGSVPS---SF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEF 426 (428)
Q Consensus 370 ~~L~L~~~~~~~~~~~---~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 426 (428)
++|||+.|.++..+.+ .+ .+++|+.|++.||++..+.-.+|.+++.|+.|||.+|+|
T Consensus 368 ~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 368 HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred hhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 9999999987654443 33 799999999999999967778999999999999999986
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=8.2e-32 Score=243.49 Aligned_cols=363 Identities=26% Similarity=0.318 Sum_probs=305.9
Q ss_pred cCCCCCcEEeccCCcCC-CCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCC
Q 042919 51 CELKNLVELDLSKNNLY-GHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKL 129 (428)
Q Consensus 51 ~~~~~L~~L~l~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L 129 (428)
+-+|..|-+++++|.+. +..|..+..+++++.|.+..+++. ..|..++.+.+|++|.+.+|++..+ ...++.++.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~v--hGELs~Lp~L 80 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISV--HGELSDLPRL 80 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhh--hhhhccchhh
Confidence 45678889999999987 678899999999999999999887 6788999999999999999998877 3478899999
Q ss_pred cEEEccCCcccc--ccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEe
Q 042919 130 QVFKLSNSLVKI--ETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYL 207 (428)
Q Consensus 130 ~~L~l~~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 207 (428)
+.+.+..|.... .+.....+. .|..+++++|++.+.|..+....++-+|++++|++. .+|..++-+++.|-.|++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~--dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLK--DLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred HHHhhhccccccCCCCchhcccc--cceeeecchhhhhhcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcc
Confidence 999999877743 233333333 499999999999999999999999999999999998 567766778999999999
Q ss_pred cCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCC-CCCCccccCCCCCCEEECcCcccCC
Q 042919 208 LNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFE-GRIPSSMSEMKRLESLDLSSNNFSG 286 (428)
Q Consensus 208 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~l~~~~~L~~L~l~~~~~~~ 286 (428)
+.|.+...++....+..|++|.+++|.+...-...+.+ +++|++|.+++.+-+ .-.|..+..+.+|+.++++.|.+.
T Consensus 158 S~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPs-mtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 158 SNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPS-MTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred ccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCcc-chhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 99999888777788899999999999864211112222 567888888886443 457788889999999999999886
Q ss_pred CCchhhhcCCCCCCEEeCCCcccccccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccc-cCCcccC
Q 042919 287 ELPRQFLSGCFSLSFLSLSDNHLQGEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYG-QIPPWFG 364 (428)
Q Consensus 287 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~-~~~~~~~ 364 (428)
..|.- +-.+++|+.|++++|.|+.... ...-.+|++|+++.|+++ ..+.+++.+++|+.|.+.+|+++- -+|.+++
T Consensus 236 ~vPec-ly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIG 313 (1255)
T KOG0444|consen 236 IVPEC-LYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIG 313 (1255)
T ss_pred cchHH-HhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchh
Confidence 55554 4578999999999999987665 445578999999999998 688899999999999999998873 4899999
Q ss_pred CCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCc
Q 042919 365 NLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNE 425 (428)
Q Consensus 365 ~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 425 (428)
.+..|+.++.++|++. ..|+.+ .|..|+.|.++.|++. .+|+++..++.|+.||++.||
T Consensus 314 KL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 314 KLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 9999999999999887 777777 8999999999999988 899999999999999999996
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=1.1e-30 Score=224.15 Aligned_cols=363 Identities=28% Similarity=0.370 Sum_probs=195.5
Q ss_pred cccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCC
Q 042919 49 GICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSK 128 (428)
Q Consensus 49 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 128 (428)
+++.+..++.++.+.+++. .+|+.+..+..|++++.+.+++. ..+..++.+..++.++..+|++... ++.+..+.+
T Consensus 86 aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~sl--p~~~~~~~~ 161 (565)
T KOG0472|consen 86 AIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQISSL--PEDMVNLSK 161 (565)
T ss_pred HHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccccC--chHHHHHHH
Confidence 3333344444444433333 33333444444444444444433 2333344444444444444444433 334444445
Q ss_pred CcEEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEec
Q 042919 129 LQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLL 208 (428)
Q Consensus 129 L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~ 208 (428)
|..+++.++.....+....... .|++++...|.++.+|..++.+.+|..|++..|.+. ..|. +.+|+.|++++++
T Consensus 162 l~~l~~~~n~l~~l~~~~i~m~--~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lPe--f~gcs~L~Elh~g 236 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHIAMK--RLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLPE--FPGCSLLKELHVG 236 (565)
T ss_pred HHHhhccccchhhCCHHHHHHH--HHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCCC--CCccHHHHHHHhc
Confidence 5555555444433333322222 255555555555555555555555555555555544 2221 2344444444444
Q ss_pred CCccCCcccCC-CCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccC--
Q 042919 209 NNSLSGNFQLP-SSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFS-- 285 (428)
Q Consensus 209 ~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-- 285 (428)
.|.+....+.. ..++++..||+.+|++. ++|+.++- +.+|++|++++|.++ ..|..++++ +|+.|-+.+|++.
T Consensus 237 ~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl-LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi 312 (565)
T KOG0472|consen 237 ENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL-LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI 312 (565)
T ss_pred ccHHHhhHHHHhcccccceeeeccccccc-cCchHHHH-hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH
Confidence 44443322222 24555666666666665 55555554 555666666666655 344455555 5555555554321
Q ss_pred --------------------------------------------------------------CCCchhhhcCC--CCCCE
Q 042919 286 --------------------------------------------------------------GELPRQFLSGC--FSLSF 301 (428)
Q Consensus 286 --------------------------------------------------------------~~~~~~~~~~~--~~L~~ 301 (428)
+.+|..+|..- .-...
T Consensus 313 Rr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~ 392 (565)
T KOG0472|consen 313 RREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTS 392 (565)
T ss_pred HHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEE
Confidence 02333333221 12444
Q ss_pred EeCCCcccccc-----------------------cc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCccc
Q 042919 302 LSLSDNHLQGE-----------------------VV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLY 356 (428)
Q Consensus 302 L~l~~~~~~~~-----------------------~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~ 356 (428)
+++++|++.+. .+ ++.+++|+.|++++|.+. +.|..+..+..|+.|+++.|.+.
T Consensus 393 VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr 471 (565)
T KOG0472|consen 393 VNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR 471 (565)
T ss_pred EecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc
Confidence 55555544311 11 445567777777766655 34444556666777777777666
Q ss_pred ccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCccC
Q 042919 357 GQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEFS 427 (428)
Q Consensus 357 ~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 427 (428)
..|.++.-...++.+-.++|++....+..+ .+.+|++|++.+|.+. .+|..+++|.+|++|+++|||+.
T Consensus 472 -~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 472 -MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred -cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 566666666666666667777775555545 7889999999999998 88889999999999999999974
No 7
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.93 E-value=7.5e-29 Score=224.45 Aligned_cols=339 Identities=25% Similarity=0.338 Sum_probs=286.4
Q ss_pred cCCCCCEEEccCCccC-cchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEEccCCccccccCCCCCCCcCCc
Q 042919 76 NLTHIKVLDLSSNQLT-GNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQL 154 (428)
Q Consensus 76 ~l~~L~~L~l~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L 154 (428)
-++-.+-++++++.+. ...|..+..+++++.|.+..+++..+ ++.++.+.+|++|.++.|......+.+..++. |
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~v--PeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~--L 80 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQV--PEELSRLQKLEHLSMAHNQLISVHGELSDLPR--L 80 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhC--hHHHHHHhhhhhhhhhhhhhHhhhhhhccchh--h
Confidence 3567788999999887 56888999999999999999988776 67899999999999999999888888888876 9
Q ss_pred cEEEcCCCCC--ccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCC-CCCCCccEEecC
Q 042919 155 KALNLRNCSL--QALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLP-SSKHDLLRLDIS 231 (428)
Q Consensus 155 ~~L~l~~~~~--~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~-~~~~~L~~L~l~ 231 (428)
+.+.+..|++ ..+|..++++..|+.|++++|++. +.|..+ .+-.++-.|++++|.+...+..+ ..+..|-.|+++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS 158 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLS 158 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccc
Confidence 9999999988 679999999999999999999998 556655 57788899999999987654433 367778889999
Q ss_pred CCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccC-CCCchhhhcCCCCCCEEeCCCcccc
Q 042919 232 HNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFS-GELPRQFLSGCFSLSFLSLSDNHLQ 310 (428)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~~~ 310 (428)
+|.+. .+|..+.. +..|++|.+++|.+....-..+..+++|.+|.++++.-+ +.+|.. +..+.+|..++++.|.+.
T Consensus 159 ~NrLe-~LPPQ~RR-L~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts-ld~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 159 NNRLE-MLPPQIRR-LSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS-LDDLHNLRDVDLSENNLP 235 (1255)
T ss_pred cchhh-hcCHHHHH-HhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc-hhhhhhhhhccccccCCC
Confidence 99987 77777776 889999999999887554455667788899999987643 345544 567889999999999988
Q ss_pred cccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCC--cCCCCcc
Q 042919 311 GEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLC--GSVPSSF 387 (428)
Q Consensus 311 ~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~--~~~~~~~ 387 (428)
..+. +..+++|+.|++++|.++. .......+.+|++|+++.|+++ .+|.+++.+++|++|.+.+|+++ +++....
T Consensus 236 ~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIG 313 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIG 313 (1255)
T ss_pred cchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchh
Confidence 7654 8889999999999999984 4445567889999999999999 99999999999999999999864 3433333
Q ss_pred ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCcc
Q 042919 388 NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEF 426 (428)
Q Consensus 388 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 426 (428)
.+.+|+.+..++|.+. ..|+.++.|+.|++|.++.|.+
T Consensus 314 KL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 314 KLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred hhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccce
Confidence 8899999999999987 8999999999999999999864
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=3.4e-27 Score=202.80 Aligned_cols=340 Identities=28% Similarity=0.319 Sum_probs=188.1
Q ss_pred cccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCC
Q 042919 49 GICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSK 128 (428)
Q Consensus 49 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 128 (428)
+++++.++..+++.++++....+..+. ++.|+.|+...+-++ ..|..++.+.+|..|++..|++..+ ..|.+|..
T Consensus 155 ~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~l---Pef~gcs~ 229 (565)
T KOG0472|consen 155 DMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFL---PEFPGCSL 229 (565)
T ss_pred HHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccC---CCCCccHH
Confidence 333444444444444444422222222 444444444433333 3344444444444444444444433 24444555
Q ss_pred CcEEEccCCccccccCCC-CCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEe
Q 042919 129 LQVFKLSNSLVKIETEEF-PGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYL 207 (428)
Q Consensus 129 L~~L~l~~~~~~~~~~~~-~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 207 (428)
|+.+.++.|.+...+.+. .+++ ++..|++.+|+++++|..+.-+.+|+.||+++|.++. .+..+ +++ +|+.|.+
T Consensus 230 L~Elh~g~N~i~~lpae~~~~L~--~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~-Lp~sL-gnl-hL~~L~l 304 (565)
T KOG0472|consen 230 LKELHVGENQIEMLPAEHLKHLN--SLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISS-LPYSL-GNL-HLKFLAL 304 (565)
T ss_pred HHHHHhcccHHHhhHHHHhcccc--cceeeeccccccccCchHHHHhhhhhhhcccCCcccc-CCccc-ccc-eeeehhh
Confidence 555555544443322221 2222 3566666666666666666666666666666666553 22222 344 5555555
Q ss_pred cCCccCCcc------------------------------------------cCCCCCCCccEEecCCCccccCCCchhhh
Q 042919 208 LNNSLSGNF------------------------------------------QLPSSKHDLLRLDISHNKFSCQLPGNMGK 245 (428)
Q Consensus 208 ~~~~~~~~~------------------------------------------~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 245 (428)
.+|+++... .......+.+.|++++.+++ .+|..++.
T Consensus 305 eGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfe 383 (565)
T KOG0472|consen 305 EGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFE 383 (565)
T ss_pred cCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHH
Confidence 555431100 00012233444555555444 44444433
Q ss_pred cCC--CCcEEEccCCCCCCCCCccccCCCCCCE-EECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc-cCCCCCc
Q 042919 246 ILP--ELLSLNLSENGFEGRIPSSMSEMKRLES-LDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV-FPNSTNL 321 (428)
Q Consensus 246 ~~~--~L~~L~l~~~~~~~~~~~~l~~~~~L~~-L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~L 321 (428)
.-. -....++++|++. ..|..+..+..+.+ +.+++|.+ .++...++.+++|..|++++|.+.+.+. ++....|
T Consensus 384 a~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i--sfv~~~l~~l~kLt~L~L~NN~Ln~LP~e~~~lv~L 460 (565)
T KOG0472|consen 384 AAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI--SFVPLELSQLQKLTFLDLSNNLLNDLPEEMGSLVRL 460 (565)
T ss_pred HhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc--ccchHHHHhhhcceeeecccchhhhcchhhhhhhhh
Confidence 111 1445555555554 34444444333332 23333333 2333446678888889998887776654 6677779
Q ss_pred ceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCccccccCceEEccCCc
Q 042919 322 CWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSFNLSSLRRLYMHMNA 401 (428)
Q Consensus 322 ~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~ 401 (428)
+.|+++.|++. ..|........++.+-.+++++....+.++.++.+|.+||+.+|.+...++....+.+|++|.++||+
T Consensus 461 q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNp 539 (565)
T KOG0472|consen 461 QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNP 539 (565)
T ss_pred heecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCc
Confidence 99999998876 46666666677777777888888666777888999999999999888666655589999999999999
Q ss_pred CC
Q 042919 402 FN 403 (428)
Q Consensus 402 ~~ 403 (428)
|.
T Consensus 540 fr 541 (565)
T KOG0472|consen 540 FR 541 (565)
T ss_pred cC
Confidence 87
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-26 Score=217.80 Aligned_cols=353 Identities=31% Similarity=0.388 Sum_probs=195.1
Q ss_pred CCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcE
Q 042919 52 ELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQV 131 (428)
Q Consensus 52 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~ 131 (428)
++-+|+.|+++++.+. ..|..+..+++|+.|+++.+.|. ..|..+.++.+|+++.+.+|.+... +..+..+.+|++
T Consensus 43 ~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~~l--P~~~~~lknl~~ 118 (1081)
T KOG0618|consen 43 KRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQSL--PASISELKNLQY 118 (1081)
T ss_pred heeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhhcC--chhHHhhhcccc
Confidence 4455999999998887 66777888999999999999887 5677888999999999999987665 568889999999
Q ss_pred EEccCCccccccCCCCCCCcCCccEEEcCCC-CC-------------------ccchhHhhhCCCccE-EEccCCcCCCC
Q 042919 132 FKLSNSLVKIETEEFPGLPEYQLKALNLRNC-SL-------------------QALPSILLQQLDLRF-IDLSHNKLQGI 190 (428)
Q Consensus 132 L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~-~~-------------------~~l~~~~~~~~~L~~-L~l~~~~~~~~ 190 (428)
|+++.|.+...+........ +.++..++| .+ ..++.... ++++ |++..|.+. .
T Consensus 119 LdlS~N~f~~~Pl~i~~lt~--~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~---~l~~~ldLr~N~~~-~ 192 (1081)
T KOG0618|consen 119 LDLSFNHFGPIPLVIEVLTA--EEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIY---NLTHQLDLRYNEME-V 192 (1081)
T ss_pred cccchhccCCCchhHHhhhH--HHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchh---hhheeeecccchhh-h
Confidence 99998888666665544433 445555544 11 11222222 2333 666666554 1
Q ss_pred CchhhhhcC--------------------CCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCC
Q 042919 191 FPSWLLQNN--------------------TKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPEL 250 (428)
Q Consensus 191 ~~~~~~~~~--------------------~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L 250 (428)
.. +..+ ++++.|+.+.|.+.. ........+|+.++++.+.+. .+|.++.. +.+|
T Consensus 193 ~d---ls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~-~~~~p~p~nl~~~dis~n~l~-~lp~wi~~-~~nl 266 (1081)
T KOG0618|consen 193 LD---LSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTT-LDVHPVPLNLQYLDISHNNLS-NLPEWIGA-CANL 266 (1081)
T ss_pred hh---hhhccchhhhhhhhcccceEEecCcchheeeeccCccee-eccccccccceeeecchhhhh-cchHHHHh-cccc
Confidence 11 1222 334444444444441 122234567888888888887 66655554 7888
Q ss_pred cEEEccCCCCCCCCC-----------------------ccccCCCCCCEEECcCcccCCCCchhhhcCCCC-CCEEeCCC
Q 042919 251 LSLNLSENGFEGRIP-----------------------SSMSEMKRLESLDLSSNNFSGELPRQFLSGCFS-LSFLSLSD 306 (428)
Q Consensus 251 ~~L~l~~~~~~~~~~-----------------------~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~-L~~L~l~~ 306 (428)
+.+...+|.+. ..+ ......++|++|++..|.+. .+|..++.-... ++.++.+.
T Consensus 267 e~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~ 344 (1081)
T KOG0618|consen 267 EALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSS 344 (1081)
T ss_pred eEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhh
Confidence 88887777654 233 33444556666666666654 344333322211 22222222
Q ss_pred cccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCC
Q 042919 307 NHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVP 384 (428)
Q Consensus 307 ~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~ 384 (428)
+.+..... -..++.|+.|++.+|.+++.....+..+.+|+.|+|++|++.......+.+++.|+.|+|+||+++...
T Consensus 345 n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp- 423 (1081)
T KOG0618|consen 345 NKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP- 423 (1081)
T ss_pred ccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhh-
Confidence 22221111 112234444455555554444444444455555555555444333334444444555555555444222
Q ss_pred Ccc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCc
Q 042919 385 SSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNE 425 (428)
Q Consensus 385 ~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 425 (428)
... .+..|++|...+|.+. ++| .+..++.|+.+|++-|.
T Consensus 424 ~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 424 DTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNN 463 (1081)
T ss_pred HHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccch
Confidence 222 4444444444444444 444 33444444444444443
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=8.4e-22 Score=205.15 Aligned_cols=340 Identities=22% Similarity=0.254 Sum_probs=241.7
Q ss_pred eecccccCCCCCcEEeccCCcC------CCCchHhhhcCC-CCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCc
Q 042919 45 FVNTGICELKNLVELDLSKNNL------YGHLSPCLSNLT-HIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGL 117 (428)
Q Consensus 45 ~~~~~~~~~~~L~~L~l~~~~~------~~~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 117 (428)
+.+.+|.++++|+.|.+..+.. ...+|..+..++ +|+.|.+.++.+. ..|..+ .+.+|+.|++.++.+..+
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L 626 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKL 626 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccccc
Confidence 3456788999999999976532 224556666654 6999999998776 556665 578999999999988765
Q ss_pred cccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCC-CccchhHhhhCCCccEEEccCCcCCCCCchhhh
Q 042919 118 FSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCS-LQALPSILLQQLDLRFIDLSHNKLQGIFPSWLL 196 (428)
Q Consensus 118 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 196 (428)
+..+..+++|+.++++++........+...+ +|++|++.+|. +..+|..+..+++|+.|++++|.....++..+
T Consensus 627 --~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~--~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 --WDGVHSLTGLRNIDLRGSKNLKEIPDLSMAT--NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred --ccccccCCCCCEEECCCCCCcCcCCccccCC--cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 4567889999999999765433333344433 59999999975 48899999999999999999987555666544
Q ss_pred hcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCC-------CCCCcccc
Q 042919 197 QNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFE-------GRIPSSMS 269 (428)
Q Consensus 197 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~-------~~~~~~l~ 269 (428)
.+++|+.|.+++|..... .+....+|++|+++++.+. .+|..+ . +++|++|.+.++... ...+....
T Consensus 702 -~l~sL~~L~Lsgc~~L~~--~p~~~~nL~~L~L~~n~i~-~lP~~~-~-l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 702 -NLKSLYRLNLSGCSRLKS--FPDISTNISWLDLDETAIE-EFPSNL-R-LENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred -CCCCCCEEeCCCCCCccc--cccccCCcCeeecCCCccc-cccccc-c-ccccccccccccchhhccccccccchhhhh
Confidence 688999999999865432 2234568999999998876 555544 2 677888877764321 11112223
Q ss_pred CCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCccccc-ccccCCCCCcceeecccCccCccchhhhhcCCCCcEE
Q 042919 270 EMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQG-EVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLEL 348 (428)
Q Consensus 270 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L 348 (428)
..++|++|++++|.....+|.. +.++++|+.|++.+|.... .+....+++|+.|++++|......+. ..++|+.|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~s-i~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~---~~~nL~~L 851 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPD---ISTNISDL 851 (1153)
T ss_pred ccccchheeCCCCCCccccChh-hhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccccc---cccccCEe
Confidence 3567888888888766566655 5678888888888875332 22233678888888888864433322 24678888
Q ss_pred EccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcC
Q 042919 349 DLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAF 402 (428)
Q Consensus 349 ~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~ 402 (428)
++++|.++ .+|.++..+++|+.|++++|+-....+... .+++|+.+++++|.-
T Consensus 852 ~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 852 NLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred ECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcc
Confidence 88888887 677788888888888888875433444444 678888888888863
No 11
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=5.4e-25 Score=207.75 Aligned_cols=265 Identities=24% Similarity=0.251 Sum_probs=184.4
Q ss_pred CccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCC
Q 042919 153 QLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISH 232 (428)
Q Consensus 153 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~ 232 (428)
+++.++++.+.+..+|+++..+.+|+.++...|.+. ..+..+ ...++|+.|.+..|.+...+..+.....|++|++..
T Consensus 242 nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~-~lp~ri-~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLPEWIGACANLEALNANHNRLV-ALPLRI-SRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred cceeeecchhhhhcchHHHHhcccceEecccchhHH-hhHHHH-hhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehh
Confidence 567777777777777777777777777777777774 444444 256677777777777666666666777888888888
Q ss_pred CccccCCCchhhhcCCC-CcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCccccc
Q 042919 233 NKFSCQLPGNMGKILPE-LLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQG 311 (428)
Q Consensus 233 ~~~~~~~~~~~~~~~~~-L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 311 (428)
|++. .+|..+...... +..++.+.+.+.......=..++.|+.|++.+|.+++. ....+.++..|+.|++++|.+..
T Consensus 320 N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~-c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 320 NNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDS-CFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred cccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccccc-chhhhccccceeeeeeccccccc
Confidence 8776 556555443333 66666666666532222223456788888888888743 33446778888888888888776
Q ss_pred ccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-c
Q 042919 312 EVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-N 388 (428)
Q Consensus 312 ~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~ 388 (428)
..+ +.+++.|++|+++||.++. .+..++.+..|++|...+|.+. ..| .+.+++.|+.+|++.|+++....... .
T Consensus 398 fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p 474 (1081)
T KOG0618|consen 398 FPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP 474 (1081)
T ss_pred CCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC
Confidence 554 7788888888888888874 4577778888888888888886 556 67888888888888888876544444 3
Q ss_pred cccCceEEccCCcCCccCCcccccCCCCCEEECCCC
Q 042919 389 LSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDN 424 (428)
Q Consensus 389 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 424 (428)
-++|+.|+++||.-.......|..+..+...++.-+
T Consensus 475 ~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 475 SPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred CcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 378888888888865455666666666666665544
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=8.8e-21 Score=197.56 Aligned_cols=339 Identities=20% Similarity=0.206 Sum_probs=238.4
Q ss_pred CchHhhhcCCCCCEEEccCCc------cCcchhhhhccCC-CCcEEeCCCCccCCccccccccCCCCCcEEEccCCcccc
Q 042919 69 HLSPCLSNLTHIKVLDLSSNQ------LTGNLQSVIANIK-SLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKI 141 (428)
Q Consensus 69 ~~~~~~~~l~~L~~L~l~~~~------~~~~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 141 (428)
..+.+|.++++|+.|.+.... +....|..+..++ +|+.|.+.++.+..+. ..+ ...+|+.|++.++.+..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP--~~f-~~~~L~~L~L~~s~l~~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMP--SNF-RPENLVKLQMQGSKLEK 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCC--CcC-CccCCcEEECcCccccc
Confidence 345678889999999886542 2223455565554 6899999888776652 223 56789999999887765
Q ss_pred ccCCCCCCCcCCccEEEcCCCC-CccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCC
Q 042919 142 ETEEFPGLPEYQLKALNLRNCS-LQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPS 220 (428)
Q Consensus 142 ~~~~~~~~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 220 (428)
.+..+..++ +|+.++++++. +..+|. +..+++|+.|++++|......+..+ ..+++|+.|++++|..........
T Consensus 626 L~~~~~~l~--~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si-~~L~~L~~L~L~~c~~L~~Lp~~i 701 (1153)
T PLN03210 626 LWDGVHSLT--GLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSI-QYLNKLEDLDMSRCENLEILPTGI 701 (1153)
T ss_pred cccccccCC--CCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhh-hccCCCCEEeCCCCCCcCccCCcC
Confidence 554444443 59999998764 566764 6678899999999887655666654 678899999998876443333333
Q ss_pred CCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCC------CCchhhhc
Q 042919 221 SKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSG------ELPRQFLS 294 (428)
Q Consensus 221 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~------~~~~~~~~ 294 (428)
.+++|+.|++++|.....++. ..++|+.|++.++.+. ..|..+ .+++|++|.+.++.... ..+.....
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhh
Confidence 678899999988865434442 2468899999988876 345444 57888888887643210 11112233
Q ss_pred CCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEE
Q 042919 295 GCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFL 372 (428)
Q Consensus 295 ~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L 372 (428)
.+++|+.|++++|......+ +..+++|+.|++++|......+... ++++|+.|++++|......|.. .++|+.|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L 851 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDL 851 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEe
Confidence 45789999998886544333 7788999999999886544444443 6889999999988544344433 3578999
Q ss_pred eCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCc
Q 042919 373 DISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNE 425 (428)
Q Consensus 373 ~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 425 (428)
+|++|.++. .|..+ .+++|+.|++++|+-...+|..+..+++|+.+++++|+
T Consensus 852 ~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 852 NLSRTGIEE-VPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ECCCCCCcc-ChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 999998874 44444 78999999999987766788888889999999999985
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=7.3e-19 Score=170.91 Aligned_cols=258 Identities=27% Similarity=0.327 Sum_probs=160.9
Q ss_pred CCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEe
Q 042919 128 KLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYL 207 (428)
Q Consensus 128 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 207 (428)
+-..|+++++.+...+..+. .+|+.|++.+|++..+|.. .++|+.|++++|.++.. +. ..++|+.|++
T Consensus 202 ~~~~LdLs~~~LtsLP~~l~----~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsL-P~----lp~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGESGLTTLPDCLP----AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSL-PV----LPPGLLELSI 269 (788)
T ss_pred CCcEEEcCCCCCCcCCcchh----cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcc-cC----cccccceeec
Confidence 34455555555443333222 1466777777776666642 35677777777766632 32 2356677777
Q ss_pred cCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCC
Q 042919 208 LNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGE 287 (428)
Q Consensus 208 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~ 287 (428)
+.|.+..... ...+|+.|++++|.+. .++. .+++|+.|++++|.+.. .+.. ...|+.|++++|.+. .
T Consensus 270 s~N~L~~Lp~---lp~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~ 336 (788)
T PRK15387 270 FSNPLTHLPA---LPSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-S 336 (788)
T ss_pred cCCchhhhhh---chhhcCEEECcCCccc-cccc----cccccceeECCCCcccc-CCCC---cccccccccccCccc-c
Confidence 7766654322 2345667777777665 3433 14567777777776663 2321 234667777777765 3
Q ss_pred CchhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCC
Q 042919 288 LPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLS 367 (428)
Q Consensus 288 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~ 367 (428)
+|. ...+|+.|++++|.+...+.. ..+|+.|++++|.+.. .+.. ..+|+.|++++|.++ .+|.. .+
T Consensus 337 LP~----lp~~Lq~LdLS~N~Ls~LP~l--p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l---~s 402 (788)
T PRK15387 337 LPT----LPSGLQELSVSDNQLASLPTL--PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVL---PS 402 (788)
T ss_pred ccc----cccccceEecCCCccCCCCCC--Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCc---cc
Confidence 442 124677777777777654332 3567777777777764 2221 356888888888887 44533 25
Q ss_pred CCcEEeCCCCcCCcCCCCccccccCceEEccCCcCCccCCcccccCCCCCEEECCCCccCC
Q 042919 368 GLQFLDISENQLCGSVPSSFNLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEFSG 428 (428)
Q Consensus 368 ~L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 428 (428)
+|+.|++++|.++.. |.. +.+|+.|++++|+++ .+|..+..+++|+.|++++|+++|
T Consensus 403 ~L~~LdLS~N~LssI-P~l--~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 403 ELKELMVSGNRLTSL-PML--PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred CCCEEEccCCcCCCC-Ccc--hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCc
Confidence 788888888887743 322 356778888888887 678888888888888888888876
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.79 E-value=1.1e-21 Score=168.84 Aligned_cols=273 Identities=23% Similarity=0.264 Sum_probs=177.8
Q ss_pred CCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCC-CccCCccccccccCCCCCcEE
Q 042919 54 KNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDD-NNFEGLFSFNSLKNHSKLQVF 132 (428)
Q Consensus 54 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~~~~~L~~L 132 (428)
+...+|.|+.|.|+.+++.+|..+++|+.|+|+.|.|+...|.+|.+++++.+|-+.+ |+|+++ +...+.++..|+.|
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l-~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDL-PKGAFGGLSSLQRL 145 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhh-hhhHhhhHHHHHHH
Confidence 3567788888888888888899999999999999988888888898888887776666 777776 44567777777777
Q ss_pred EccCCccc-cccCCCCCCCcCCccEEEcCCCCCccchh-HhhhCCCccEEEccCCcC-CCCCchhhhh----------cC
Q 042919 133 KLSNSLVK-IETEEFPGLPEYQLKALNLRNCSLQALPS-ILLQQLDLRFIDLSHNKL-QGIFPSWLLQ----------NN 199 (428)
Q Consensus 133 ~l~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~~~~l~~-~~~~~~~L~~L~l~~~~~-~~~~~~~~~~----------~~ 199 (428)
.+.-+.+. +....|..++. +..|.+.+|.++.++. .+..+..++.+.+..+++ .+.-..+... ..
T Consensus 146 llNan~i~Cir~~al~dL~~--l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsga 223 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPS--LSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGA 223 (498)
T ss_pred hcChhhhcchhHHHHHHhhh--cchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccc
Confidence 77655442 23334444443 6666666766666655 455555666666665552 2111111100 00
Q ss_pred CCCCEEEecCCccCCcccCCCCCCCccEE---ecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCE
Q 042919 200 TKLDTLYLLNNSLSGNFQLPSSKHDLLRL---DISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLES 276 (428)
Q Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~L~~L---~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 276 (428)
.......+.+.++... ..-....+++.+ -.+.+......|..-+..+++|++|++++|.++++.+.+|.....++.
T Consensus 224 rc~~p~rl~~~Ri~q~-~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 224 RCVSPYRLYYKRINQE-DARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred eecchHHHHHHHhccc-chhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhh
Confidence 0000000000000000 000011112222 223343444556666677899999999999999888889999999999
Q ss_pred EECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCcc
Q 042919 277 LDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHF 331 (428)
Q Consensus 277 L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~ 331 (428)
|.+..|++. .+...+|.++..|++|++++|+|+...+ |.....|.+|.+-.|++
T Consensus 303 L~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 303 LYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 999999887 6777888899999999999999886554 77788888888866654
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.76 E-value=1.4e-17 Score=162.04 Aligned_cols=263 Identities=23% Similarity=0.266 Sum_probs=153.4
Q ss_pred CCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEE
Q 042919 78 THIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKAL 157 (428)
Q Consensus 78 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L 157 (428)
.+-..|+++++.++ .+|..+. ++|+.|++.+|+++.+.. .+++|++|++++|.+...+.. + .+|+.|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~-----lp~~Lk~LdLs~N~LtsLP~l----p-~sL~~L 267 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA-----LPPELRTLEVSGNQLTSLPVL----P-PGLLEL 267 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC-----CCCCCcEEEecCCccCcccCc----c-ccccee
Confidence 34566777777666 3454443 367777777777665411 246677777776665433321 1 247777
Q ss_pred EcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCcccc
Q 042919 158 NLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSC 237 (428)
Q Consensus 158 ~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 237 (428)
++.+|.+..+|... .+|+.|++++|.+.. ++. ..++|+.|++++|.+..... ...+|+.|++++|.+.
T Consensus 268 ~Ls~N~L~~Lp~lp---~~L~~L~Ls~N~Lt~-LP~----~p~~L~~LdLS~N~L~~Lp~---lp~~L~~L~Ls~N~L~- 335 (788)
T PRK15387 268 SIFSNPLTHLPALP---SGLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQLASLPA---LPSELCKLWAYNNQLT- 335 (788)
T ss_pred eccCCchhhhhhch---hhcCEEECcCCcccc-ccc----cccccceeECCCCccccCCC---CcccccccccccCccc-
Confidence 77777766666422 356777777776663 222 23567777777776665332 2235666677776665
Q ss_pred CCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccCC
Q 042919 238 QLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFPN 317 (428)
Q Consensus 238 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 317 (428)
.+|. .+.+|+.|++++|.+.. +|.. .++|+.|++++|.+. .++.. ..+|+.|++++|.+......
T Consensus 336 ~LP~----lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt~LP~l-- 400 (788)
T PRK15387 336 SLPT----LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLTSLPVL-- 400 (788)
T ss_pred cccc----cccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc----ccccceEEecCCcccCCCCc--
Confidence 3332 13467777777776663 3321 245666677777665 34431 34567777777766643322
Q ss_pred CCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCC
Q 042919 318 STNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPS 385 (428)
Q Consensus 318 ~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~ 385 (428)
.++|+.|++++|.+... +.. +.+|+.|++++|+++ .+|..+.+++.|+.|+|++|++++..+.
T Consensus 401 ~s~L~~LdLS~N~LssI-P~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 401 PSELKELMVSGNRLTSL-PML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred ccCCCEEEccCCcCCCC-Ccc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 34667777777766532 221 235666777777776 5666666677777777777776654443
No 16
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.75 E-value=1.1e-20 Score=162.75 Aligned_cols=376 Identities=19% Similarity=0.174 Sum_probs=217.5
Q ss_pred CCcceeeeecccccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccC-CccCcchhhhhccCCCCcEEeCCCCccCC
Q 042919 38 NGVPLTVFVNTGICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSS-NQLTGNLQSVIANIKSLEYLSLDDNNFEG 116 (428)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 116 (428)
+...++.+.+.+|+.+++||.|+|++|.|+.+.|.+|..+++|.+|.+-+ ++|+.....+|.++..++.|.+.-|++.-
T Consensus 75 dqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~C 154 (498)
T KOG4237|consen 75 DQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINC 154 (498)
T ss_pred ccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcc
Confidence 33446677789999999999999999999999999999999999988777 78986666789999999999998888765
Q ss_pred ccccccccCCCCCcEEEccCCcccccc-CCCCCCCcCCccEEEcCCCC------Ccc-------chhHhhhCCCccEEEc
Q 042919 117 LFSFNSLKNHSKLQVFKLSNSLVKIET-EEFPGLPEYQLKALNLRNCS------LQA-------LPSILLQQLDLRFIDL 182 (428)
Q Consensus 117 ~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~~L~~L~l~~~~------~~~-------l~~~~~~~~~L~~L~l 182 (428)
+ ....+..+++|..|.+.++.+.... ..|..... ++++.+..+. +.. .+.++.......-..+
T Consensus 155 i-r~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~--i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl 231 (498)
T KOG4237|consen 155 I-RQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAA--IKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRL 231 (498)
T ss_pred h-hHHHHHHhhhcchhcccchhhhhhccccccchhc--cchHhhhcCccccccccchhhhHHhhchhhcccceecchHHH
Confidence 5 3367888999999998888774433 35555443 6666655543 111 1111111111222222
Q ss_pred cCCcCCCCCchhhhhcCCCCCEEEecCCccCCc--ccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCC
Q 042919 183 SHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGN--FQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGF 260 (428)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 260 (428)
...++..+....+......+..=..+.|..... ..-...+++|+++++++|.++ .+....+.+..+++.|++..|.+
T Consensus 232 ~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~-~i~~~aFe~~a~l~eL~L~~N~l 310 (498)
T KOG4237|consen 232 YYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT-RIEDGAFEGAAELQELYLTRNKL 310 (498)
T ss_pred HHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc-hhhhhhhcchhhhhhhhcCcchH
Confidence 222332222222221111111001111111000 011235666666666666666 33333334466677777777666
Q ss_pred CCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccc------------------cccCCCCCcc
Q 042919 261 EGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGE------------------VVFPNSTNLC 322 (428)
Q Consensus 261 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~------------------~~~~~~~~L~ 322 (428)
.......|.++..|++|++.+|+++ .+...+|.....|.+|.+-.|.+... ..-.....++
T Consensus 311 ~~v~~~~f~~ls~L~tL~L~~N~it-~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~ 389 (498)
T KOG4237|consen 311 EFVSSGMFQGLSGLKTLSLYDNQIT-TVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVR 389 (498)
T ss_pred HHHHHHhhhccccceeeeecCCeeE-EEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhc
Confidence 6555555666666777777777666 34444455666666666655443311 1122233455
Q ss_pred eeecccCccCcc---chh---------hhhcCCCCcEE-EccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcccc
Q 042919 323 WLYLNNNHFSGK---IQD---------GLSKATSLLEL-DLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSFNL 389 (428)
Q Consensus 323 ~L~l~~~~~~~~---~~~---------~l~~~~~L~~L-~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~ 389 (428)
.+.++...+.+. .++ .-..++.+.++ ..++..++ .+|..+. ..-..|.+.+|.++....+ .+
T Consensus 390 ~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~~vp~~--~~ 464 (498)
T KOG4237|consen 390 QIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAITSVPDE--LL 464 (498)
T ss_pred cccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhcccCHH--HH
Confidence 555554433211 111 11122333333 22222333 4444332 2456678888888744444 45
Q ss_pred ccCceEEccCCcCCccCCcccccCCCCCEEECCCC
Q 042919 390 SSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDN 424 (428)
Q Consensus 390 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 424 (428)
.+| .+++++|++..-.-..|.++.+|.+|.++.|
T Consensus 465 ~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 465 RSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 677 8899999988555667888888888888765
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.72 E-value=4.1e-17 Score=159.77 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=156.0
Q ss_pred CccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCC
Q 042919 153 QLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISH 232 (428)
Q Consensus 153 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~ 232 (428)
+...|+++++++..+|..+. +.|+.|++++|.++ .++..+ ..+|+.|++++|.+...+.. ...+|+.|++++
T Consensus 179 ~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~LtsLP~~--l~~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTTIPACIP--EQITTLILDNNELK-SLPENL---QGNIKTLYANSNQLTSIPAT--LPDTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCC-cCChhh---ccCCCEEECCCCccccCChh--hhccccEEECcC
Confidence 35566666666666665432 36777777777666 344333 24677777777766543321 124677777777
Q ss_pred CccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccc
Q 042919 233 NKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGE 312 (428)
Q Consensus 233 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 312 (428)
|.+. .+|..+ ..+|+.|++++|.+. ..|..+. ++|++|++++|.+. .++... ..+|+.|++++|.+...
T Consensus 251 N~L~-~LP~~l---~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l---p~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 251 NRIT-ELPERL---PSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHL---PSGITHLNVQSNSLTAL 319 (754)
T ss_pred CccC-cCChhH---hCCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccc---hhhHHHHHhcCCccccC
Confidence 7776 555544 346778888777776 3444432 46788888887766 444322 24677777777776643
Q ss_pred cccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCccccccC
Q 042919 313 VVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSFNLSSL 392 (428)
Q Consensus 313 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~L 392 (428)
.. ...++|+.|++++|.++. .+..+ .++|+.|++++|.++ .+|..+. +.|+.|+|++|+++.. |..+ ..+|
T Consensus 320 P~-~l~~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L-P~~l-~~sL 390 (754)
T PRK15370 320 PE-TLPPGLKTLEAGENALTS-LPASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNL-PENL-PAAL 390 (754)
T ss_pred Cc-cccccceeccccCCcccc-CChhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCCC-CHhH-HHHH
Confidence 22 223678888888887764 33333 367888888888877 4555442 5788888888887743 3332 2468
Q ss_pred ceEEccCCcCCccCCcc----cccCCCCCEEECCCCccC
Q 042919 393 RRLYMHMNAFNGSIPGA----LRRSLSLTVLDLRDNEFS 427 (428)
Q Consensus 393 ~~L~l~~~~~~~~~~~~----~~~~~~L~~L~l~~~~~~ 427 (428)
+.|++++|++. .+|.. +..++.+..|++.+||++
T Consensus 391 ~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 391 QIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 88888888887 55543 344577888888888875
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=3.9e-18 Score=155.03 Aligned_cols=269 Identities=25% Similarity=0.268 Sum_probs=181.8
Q ss_pred EEcCCCCC--ccchhHhhhCCCccEEEccCCcCCCCCchh---hhhcCCCCCEEEecCCccCC-------cccCCCCCCC
Q 042919 157 LNLRNCSL--QALPSILLQQLDLRFIDLSHNKLQGIFPSW---LLQNNTKLDTLYLLNNSLSG-------NFQLPSSKHD 224 (428)
Q Consensus 157 L~l~~~~~--~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~---~~~~~~~L~~L~l~~~~~~~-------~~~~~~~~~~ 224 (428)
|++..+.+ ......+..+++|+.++++++.+++..... .....+.++.+.++++.... .......+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 45555554 455666777788999999999886543222 23456779999998887652 0112335779
Q ss_pred ccEEecCCCccccCCCchhhhcCCC---CcEEEccCCCCCCC----CCccccCC-CCCCEEECcCcccCCCCc---hhhh
Q 042919 225 LLRLDISHNKFSCQLPGNMGKILPE---LLSLNLSENGFEGR----IPSSMSEM-KRLESLDLSSNNFSGELP---RQFL 293 (428)
Q Consensus 225 L~~L~l~~~~~~~~~~~~~~~~~~~---L~~L~l~~~~~~~~----~~~~l~~~-~~L~~L~l~~~~~~~~~~---~~~~ 293 (428)
|+.|+++++.+....+..+.. +.. |+.|++++|.+.+. ....+..+ ++|++|++++|.+.+... ...+
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~-l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLES-LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred eeEEEccCCCCChhHHHHHHH-HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 999999998886444444433 333 99999999887632 22345566 889999999998764322 2234
Q ss_pred cCCCCCCEEeCCCcccccccc------cCCCCCcceeecccCccCccc----hhhhhcCCCCcEEEccCCcccccCCccc
Q 042919 294 SGCFSLSFLSLSDNHLQGEVV------FPNSTNLCWLYLNNNHFSGKI----QDGLSKATSLLELDLSNNMLYGQIPPWF 363 (428)
Q Consensus 294 ~~~~~L~~L~l~~~~~~~~~~------~~~~~~L~~L~l~~~~~~~~~----~~~l~~~~~L~~L~l~~~~i~~~~~~~~ 363 (428)
..++.|++|++.+|.+.+... +..+++|++|++++|.+++.. ...+..+++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 566789999999988774321 445678999999998876443 3345667889999999988875322222
Q ss_pred C-----CCCCCcEEeCCCCcCCcCCCCc----c-ccccCceEEccCCcCCcc----CCcccccC-CCCCEEECCCCcc
Q 042919 364 G-----NLSGLQFLDISENQLCGSVPSS----F-NLSSLRRLYMHMNAFNGS----IPGALRRS-LSLTVLDLRDNEF 426 (428)
Q Consensus 364 ~-----~~~~L~~L~L~~~~~~~~~~~~----~-~~~~L~~L~l~~~~~~~~----~~~~~~~~-~~L~~L~l~~~~~ 426 (428)
. ..+.|+.|++++|.+++..... + .+++|+.+++++|.+... ....+... +.|+.+++.++|+
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 1 2478999999999887432222 2 457899999999998744 33344444 6899999988875
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1.2e-17 Score=151.83 Aligned_cols=279 Identities=24% Similarity=0.252 Sum_probs=138.0
Q ss_pred EeccCCcCC-CCchHhhhcCCCCCEEEccCCccCc----chhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEE
Q 042919 59 LDLSKNNLY-GHLSPCLSNLTHIKVLDLSSNQLTG----NLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFK 133 (428)
Q Consensus 59 L~l~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~----~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 133 (428)
|+|.++.+. ......+..+++|+.|+++++.++. ..+..+...+++++++++++.+... +
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~-~-------------- 67 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRI-P-------------- 67 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCc-c--------------
Confidence 455555554 3344455666667777777776642 1333444556666666666543310 0
Q ss_pred ccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcC---CCCCEEEecCC
Q 042919 134 LSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNN---TKLDTLYLLNN 210 (428)
Q Consensus 134 l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~---~~L~~L~l~~~ 210 (428)
.....++..+..+++|+.|++++|.+....+..+ ..+ ++|+.|++++|
T Consensus 68 ----------------------------~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~-~~l~~~~~L~~L~ls~~ 118 (319)
T cd00116 68 ----------------------------RGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL-ESLLRSSSLQELKLNNN 118 (319)
T ss_pred ----------------------------hHHHHHHHHHHhcCceeEEEccCCCCChhHHHHH-HHHhccCcccEEEeeCC
Confidence 0012234445555566666666666543332222 112 22555555554
Q ss_pred ccCCc-----ccCCCCC-CCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCccc
Q 042919 211 SLSGN-----FQLPSSK-HDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNF 284 (428)
Q Consensus 211 ~~~~~-----~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 284 (428)
.+... ......+ ++|++|++++|.+++..... ....+..+++|++|++++|.+
T Consensus 119 ~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~---------------------~~~~~~~~~~L~~L~l~~n~l 177 (319)
T cd00116 119 GLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEA---------------------LAKALRANRDLKELNLANNGI 177 (319)
T ss_pred ccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHH---------------------HHHHHHhCCCcCEEECcCCCC
Confidence 43310 0011122 44555555555443211111 122233444555555555544
Q ss_pred CCCCchh---hhcCCCCCCEEeCCCccccccc------ccCCCCCcceeecccCccCccchhhhhc-----CCCCcEEEc
Q 042919 285 SGELPRQ---FLSGCFSLSFLSLSDNHLQGEV------VFPNSTNLCWLYLNNNHFSGKIQDGLSK-----ATSLLELDL 350 (428)
Q Consensus 285 ~~~~~~~---~~~~~~~L~~L~l~~~~~~~~~------~~~~~~~L~~L~l~~~~~~~~~~~~l~~-----~~~L~~L~l 350 (428)
.+..... .+...+.|+.|++++|.+.+.. .+..+++|++|++++|.+++.....+.. .+.|++|++
T Consensus 178 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l 257 (319)
T cd00116 178 GDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257 (319)
T ss_pred chHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEc
Confidence 4211111 1223345555555555544221 1445667777777777666433322221 367777887
Q ss_pred cCCcccc----cCCcccCCCCCCcEEeCCCCcCCcCCCCcc-----cc-ccCceEEccCCcC
Q 042919 351 SNNMLYG----QIPPWFGNLSGLQFLDISENQLCGSVPSSF-----NL-SSLRRLYMHMNAF 402 (428)
Q Consensus 351 ~~~~i~~----~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-----~~-~~L~~L~l~~~~~ 402 (428)
++|.+++ .+...+..+++|+.+++++|++++.....+ .. +.|+++++.++++
T Consensus 258 ~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 258 SCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 7777752 233445556778888888887775533222 23 5777777777653
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.67 E-value=3.3e-16 Score=153.42 Aligned_cols=246 Identities=20% Similarity=0.279 Sum_probs=120.9
Q ss_pred CCcEEeCCCCccCCccccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEc
Q 042919 103 SLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDL 182 (428)
Q Consensus 103 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l 182 (428)
+...|++++++++.+ +..+ .+.|+.|++++|.+...+..+. .+|++|++++|.+..+|..+. ++|+.|++
T Consensus 179 ~~~~L~L~~~~LtsL--P~~I--p~~L~~L~Ls~N~LtsLP~~l~----~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLTTI--PACI--PEQITTLILDNNELKSLPENLQ----GNIKTLYANSNQLTSIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcCcC--Cccc--ccCCcEEEecCCCCCcCChhhc----cCCCEEECCCCccccCChhhh--ccccEEEC
Confidence 456677777666654 1122 2456666776665543333221 246667776666666665443 25666666
Q ss_pred cCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCC
Q 042919 183 SHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEG 262 (428)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 262 (428)
++|.+. .++..+ .++|+.|++++|.+...+... .++|+.|++++|.+. .++..+ .++|+.|++++|.+..
T Consensus 249 s~N~L~-~LP~~l---~s~L~~L~Ls~N~L~~LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l---p~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRIT-ELPERL---PSALQSLDLFHNKISCLPENL--PEELRYLSVYDNSIR-TLPAHL---PSGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccC-cCChhH---hCCCCEEECcCCccCcccccc--CCCCcEEECCCCccc-cCcccc---hhhHHHHHhcCCcccc
Confidence 666665 334333 235666666666555432211 235666666666555 333322 2345566666665552
Q ss_pred CCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcC
Q 042919 263 RIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKA 342 (428)
Q Consensus 263 ~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~ 342 (428)
.|..+ .++|++|++++|.+. .++... +++|+.|++++|.+..... .-.++|+.|++++|.++.. +..+.
T Consensus 319 -LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~L~~LP~-~lp~~L~~LdLs~N~Lt~L-P~~l~-- 387 (754)
T PRK15370 319 -LPETL--PPGLKTLEAGENALT-SLPASL---PPELQVLDVSKNQITVLPE-TLPPTITTLDVSRNALTNL-PENLP-- 387 (754)
T ss_pred -CCccc--cccceeccccCCccc-cCChhh---cCcccEEECCCCCCCcCCh-hhcCCcCEEECCCCcCCCC-CHhHH--
Confidence 22222 245566666666554 343322 2455555555555442211 1124555555555555432 22221
Q ss_pred CCCcEEEccCCcccccCCccc----CCCCCCcEEeCCCCcCC
Q 042919 343 TSLLELDLSNNMLYGQIPPWF----GNLSGLQFLDISENQLC 380 (428)
Q Consensus 343 ~~L~~L~l~~~~i~~~~~~~~----~~~~~L~~L~L~~~~~~ 380 (428)
.+|+.|++++|++. .+|..+ ..++.+..|++.+|+++
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 23555555555554 333222 22344555555555544
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.46 E-value=7.3e-16 Score=118.14 Aligned_cols=177 Identities=32% Similarity=0.468 Sum_probs=136.9
Q ss_pred CCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCC
Q 042919 220 SSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSL 299 (428)
Q Consensus 220 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L 299 (428)
..+.++..|.++.+.++ .++..++. +.+|+.|++.+|++. ..|..++.+++|+.|+++.|++. ..|.. |+.++.|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~-l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprg-fgs~p~l 104 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAE-LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRG-FGSFPAL 104 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHH-hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccc-cCCCchh
Confidence 34556777888888887 66777776 788999999999987 57888899999999999988876 55554 6788999
Q ss_pred CEEeCCCcccccccc---cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCC
Q 042919 300 SFLSLSDNHLQGEVV---FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISE 376 (428)
Q Consensus 300 ~~L~l~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~ 376 (428)
+.|++++|++.+... +..+..|+.|++++|.+. ..+...+++++|+.|.+..|.+- .+|..++.+..|+.|++.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 999999888775443 677788999999999887 56667789999999999999887 7888999999999999999
Q ss_pred CcCCcCCCCccc---cccCceEEccCCcCC
Q 042919 377 NQLCGSVPSSFN---LSSLRRLYMHMNAFN 403 (428)
Q Consensus 377 ~~~~~~~~~~~~---~~~L~~L~l~~~~~~ 403 (428)
|.++-.+|+... ..+=..+.+..|+..
T Consensus 183 nrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 183 NRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred ceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 998855554431 122233444555543
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.37 E-value=1.1e-14 Score=111.78 Aligned_cols=159 Identities=26% Similarity=0.395 Sum_probs=119.1
Q ss_pred cccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCC
Q 042919 49 GICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSK 128 (428)
Q Consensus 49 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 128 (428)
.+.++.+.+.|.+++++++ ..|..++.+.+|+.|++.+++++ ..|..+..++.|+.|++.-|++... +..++.+|.
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~l--prgfgs~p~ 103 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNIL--PRGFGSFPA 103 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcC--ccccCCCch
Confidence 3556778888889988888 55667888889999999988887 6777888888899988887776544 567888888
Q ss_pred CcEEEccCCccc--cccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEE
Q 042919 129 LQVFKLSNSLVK--IETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLY 206 (428)
Q Consensus 129 L~~L~l~~~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 206 (428)
|+.|++.++... ..++.|..... |+.|++++|.++-+|...+.+++|+.|.+.+|.+. ..|..+ +.++.|++|.
T Consensus 104 levldltynnl~e~~lpgnff~m~t--lralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkei-g~lt~lrelh 179 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTT--LRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEI-GDLTRLRELH 179 (264)
T ss_pred hhhhhccccccccccCCcchhHHHH--HHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHH-HHHHHHHHHh
Confidence 888888877663 23444444443 78888888888888888888888888888888766 455554 4567777777
Q ss_pred ecCCccCCc
Q 042919 207 LLNNSLSGN 215 (428)
Q Consensus 207 l~~~~~~~~ 215 (428)
+.+++++..
T Consensus 180 iqgnrl~vl 188 (264)
T KOG0617|consen 180 IQGNRLTVL 188 (264)
T ss_pred cccceeeec
Confidence 777766543
No 23
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.36 E-value=1.3e-13 Score=117.78 Aligned_cols=183 Identities=20% Similarity=0.218 Sum_probs=107.2
Q ss_pred CCCCCccEEecCCCccccCCCchh---hhcCCCCcEEEccCCCCCCCCC-------------ccccCCCCCCEEECcCcc
Q 042919 220 SSKHDLLRLDISHNKFSCQLPGNM---GKILPELLSLNLSENGFEGRIP-------------SSMSEMKRLESLDLSSNN 283 (428)
Q Consensus 220 ~~~~~L~~L~l~~~~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~~~~-------------~~l~~~~~L~~L~l~~~~ 283 (428)
..++.|+++++++|.+....+..+ .+.+..|+.|++.+|.+....- ......+.|+++.+.+|+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 355577777777777654444332 2336778888888887763221 223456778888888888
Q ss_pred cCCCC---chhhhcCCCCCCEEeCCCcccccccc------cCCCCCcceeecccCccCccc----hhhhhcCCCCcEEEc
Q 042919 284 FSGEL---PRQFLSGCFSLSFLSLSDNHLQGEVV------FPNSTNLCWLYLNNNHFSGKI----QDGLSKATSLLELDL 350 (428)
Q Consensus 284 ~~~~~---~~~~~~~~~~L~~L~l~~~~~~~~~~------~~~~~~L~~L~l~~~~~~~~~----~~~l~~~~~L~~L~l 350 (428)
+.... ....+...+.|+.+.+..|.|..... +..|++|+.|++++|.++... ...++.+++|+.+++
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNL 248 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecc
Confidence 76321 12344556788888887777765433 566777777777777665432 234455566666666
Q ss_pred cCCcccccCCccc-----CCCCCCcEEeCCCCcCCcCCCCcc-----ccccCceEEccCCcC
Q 042919 351 SNNMLYGQIPPWF-----GNLSGLQFLDISENQLCGSVPSSF-----NLSSLRRLYMHMNAF 402 (428)
Q Consensus 351 ~~~~i~~~~~~~~-----~~~~~L~~L~L~~~~~~~~~~~~~-----~~~~L~~L~l~~~~~ 402 (428)
++|.+.......+ ...|.|+.|.+.+|.++......+ ..+.|+.|++++|.+
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 6665543322222 124566666666666554322222 345666666666665
No 24
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=5.4e-13 Score=117.28 Aligned_cols=162 Identities=26% Similarity=0.234 Sum_probs=89.1
Q ss_pred hhhcCCCCcEEEccCCCCCCCCCcc-ccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCccccc--ccccCCCC
Q 042919 243 MGKILPELLSLNLSENGFEGRIPSS-MSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQG--EVVFPNST 319 (428)
Q Consensus 243 ~~~~~~~L~~L~l~~~~~~~~~~~~-l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~--~~~~~~~~ 319 (428)
+++.+|+|+.|+++.|.+....... -..+++|+.|.++.|.++..-.......+|+|+.|++..|.... ......+.
T Consensus 167 i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~ 246 (505)
T KOG3207|consen 167 IAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQ 246 (505)
T ss_pred HHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhh
Confidence 3444555555555555543211111 11345566666666665533334444556666666666663221 12244556
Q ss_pred CcceeecccCccCccc-hhhhhcCCCCcEEEccCCccccc-CCcc-----cCCCCCCcEEeCCCCcCCcCCCCcc--ccc
Q 042919 320 NLCWLYLNNNHFSGKI-QDGLSKATSLLELDLSNNMLYGQ-IPPW-----FGNLSGLQFLDISENQLCGSVPSSF--NLS 390 (428)
Q Consensus 320 ~L~~L~l~~~~~~~~~-~~~l~~~~~L~~L~l~~~~i~~~-~~~~-----~~~~~~L~~L~L~~~~~~~~~~~~~--~~~ 390 (428)
.|++|+|++|++.+.. ......++.|+.|.++.+++.+. .|++ ...+++|++|++..|++.+...-.- .++
T Consensus 247 ~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 247 TLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLE 326 (505)
T ss_pred HHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccc
Confidence 6777777776655332 23345667777777777766533 2332 2345777777777777754433222 567
Q ss_pred cCceEEccCCcCCc
Q 042919 391 SLRRLYMHMNAFNG 404 (428)
Q Consensus 391 ~L~~L~l~~~~~~~ 404 (428)
+|+.|.+.+|++..
T Consensus 327 nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 327 NLKHLRITLNYLNK 340 (505)
T ss_pred hhhhhhcccccccc
Confidence 77777777777753
No 25
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=6.9e-13 Score=116.63 Aligned_cols=207 Identities=25% Similarity=0.229 Sum_probs=146.1
Q ss_pred CCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCC--CCCccccCCCCCCEEECcCcccCCCCchhhhcCCCC
Q 042919 221 SKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEG--RIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFS 298 (428)
Q Consensus 221 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~--~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 298 (428)
.+..|+++.+.++.+.........+.|++++.|+++.|-+.. .+-.....+|+|+.|+++.|++........-..++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 445566666666665433333455668999999999986652 233445689999999999998763333322335789
Q ss_pred CCEEeCCCcccccccc---cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCccccc-CCcccCCCCCCcEEeC
Q 042919 299 LSFLSLSDNHLQGEVV---FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQ-IPPWFGNLSGLQFLDI 374 (428)
Q Consensus 299 L~~L~l~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~-~~~~~~~~~~L~~L~L 374 (428)
|+.|.++.|.++-... ...+|+|+.|++..|............+..|++|+|++|.+-+. .-...+.+|.|..|.+
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 9999999999883222 67899999999999853323333344567899999999987533 2245778899999999
Q ss_pred CCCcCCcCCC-Cc------cccccCceEEccCCcCCcc-CCcccccCCCCCEEECCCCccC
Q 042919 375 SENQLCGSVP-SS------FNLSSLRRLYMHMNAFNGS-IPGALRRSLSLTVLDLRDNEFS 427 (428)
Q Consensus 375 ~~~~~~~~~~-~~------~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~ 427 (428)
+.|.+..... .. ..+++|+.|++..|+|.+. .-..+..+++|+.|.+.+|+++
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 9998765222 22 1589999999999999632 2345667888899888888764
No 26
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=1.8e-12 Score=110.91 Aligned_cols=183 Identities=23% Similarity=0.251 Sum_probs=117.2
Q ss_pred cCCCCCEEEecCCccCC-----cccCCCCCCCccEEecCCCccccCCCchh------------hhcCCCCcEEEccCCCC
Q 042919 198 NNTKLDTLYLLNNSLSG-----NFQLPSSKHDLLRLDISHNKFSCQLPGNM------------GKILPELLSLNLSENGF 260 (428)
Q Consensus 198 ~~~~L~~L~l~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~~~~~~------------~~~~~~L~~L~l~~~~~ 260 (428)
.+++|+++++|+|.+.. .-+...++..|+.|.+.+|.+....-..+ ....+.|+++...+|++
T Consensus 90 ~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 90 GCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred cCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 34456666666655432 11223345566666666665432111111 11256788888888877
Q ss_pred CCC----CCccccCCCCCCEEECcCcccCCCCc---hhhhcCCCCCCEEeCCCcccccccc------cCCCCCcceeecc
Q 042919 261 EGR----IPSSMSEMKRLESLDLSSNNFSGELP---RQFLSGCFSLSFLSLSDNHLQGEVV------FPNSTNLCWLYLN 327 (428)
Q Consensus 261 ~~~----~~~~l~~~~~L~~L~l~~~~~~~~~~---~~~~~~~~~L~~L~l~~~~~~~~~~------~~~~~~L~~L~l~ 327 (428)
.+. .-..++..+.|+.+.+..|.+..... ...+..++.|+.|++.+|.++.... ++..++|++++++
T Consensus 170 en~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~ 249 (382)
T KOG1909|consen 170 ENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLG 249 (382)
T ss_pred ccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccc
Confidence 532 22345667888888888887653322 3346678888888888888775443 6777889999999
Q ss_pred cCccCccchhhh-----hcCCCCcEEEccCCccccc----CCcccCCCCCCcEEeCCCCcCC
Q 042919 328 NNHFSGKIQDGL-----SKATSLLELDLSNNMLYGQ----IPPWFGNLSGLQFLDISENQLC 380 (428)
Q Consensus 328 ~~~~~~~~~~~l-----~~~~~L~~L~l~~~~i~~~----~~~~~~~~~~L~~L~L~~~~~~ 380 (428)
+|.+......++ ...|+|+.+.+.+|.|+.. +..++...|.|++|+|++|.+.
T Consensus 250 dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 250 DCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 998876554443 2468899999999988632 2334556789999999999883
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.23 E-value=7.4e-12 Score=100.38 Aligned_cols=126 Identities=26% Similarity=0.256 Sum_probs=35.2
Q ss_pred CCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEE
Q 042919 270 EMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELD 349 (428)
Q Consensus 270 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~ 349 (428)
+..++++|++.+|.+. .+.. .-..+.+|+.|++++|.+.....+..++.|++|++++|.++.........+++|++|+
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie~-L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIEN-LGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp --------------------S---TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc-cccc-hhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3445666666666665 2321 1113556666666666666655566666666666666666543222223456666666
Q ss_pred ccCCccccc-CCcccCCCCCCcEEeCCCCcCCcCCCCcc-----ccccCceEEcc
Q 042919 350 LSNNMLYGQ-IPPWFGNLSGLQFLDISENQLCGSVPSSF-----NLSSLRRLYMH 398 (428)
Q Consensus 350 l~~~~i~~~-~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-----~~~~L~~L~l~ 398 (428)
+++|+|.+. .-..++.+|+|+.|++.+|+++.. .... .+|+|+.||-.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 666665432 123445556666666666665533 1111 45555555543
No 28
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.18 E-value=4.6e-12 Score=106.32 Aligned_cols=127 Identities=24% Similarity=0.280 Sum_probs=66.7
Q ss_pred CCCEEeCCCcccccccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCC
Q 042919 298 SLSFLSLSDNHLQGEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISE 376 (428)
Q Consensus 298 ~L~~L~l~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~ 376 (428)
.|+++++++|.|..... ..-.|.++.|+++.|.+... ..++.+++|+.|++++|.++ ....+-..+-+.++|.|++
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 44445555555443322 33445555555555555422 22455566666666666555 3344444555666666666
Q ss_pred CcCCcCCCCccccccCceEEccCCcCCccC-CcccccCCCCCEEECCCCccCC
Q 042919 377 NQLCGSVPSSFNLSSLRRLYMHMNAFNGSI-PGALRRSLSLTVLDLRDNEFSG 428 (428)
Q Consensus 377 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~ 428 (428)
|.+. .......+-+|+.|++++|+|.... -..++++|-|+.+.+.+||+.|
T Consensus 362 N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 362 NKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 6554 2222224556666666666665322 2345666666666666666654
No 29
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=3.3e-11 Score=96.68 Aligned_cols=124 Identities=29% Similarity=0.263 Sum_probs=40.9
Q ss_pred CCCCCCEEeCCCcccccccccC-CCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCccc-CCCCCCcEE
Q 042919 295 GCFSLSFLSLSDNHLQGEVVFP-NSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWF-GNLSGLQFL 372 (428)
Q Consensus 295 ~~~~L~~L~l~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~-~~~~~L~~L 372 (428)
++..+++|++.++.|.....+. .+.+|+.|++++|.+... +.+..++.|+.|++++|.|+ .+...+ ..+|+|+.|
T Consensus 17 n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccccccccchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 4456677777777777665555 466777777777777643 34566777777777777776 333333 356777777
Q ss_pred eCCCCcCCcCCCC-cc-ccccCceEEccCCcCCccCC---cccccCCCCCEEEC
Q 042919 373 DISENQLCGSVPS-SF-NLSSLRRLYMHMNAFNGSIP---GALRRSLSLTVLDL 421 (428)
Q Consensus 373 ~L~~~~~~~~~~~-~~-~~~~L~~L~l~~~~~~~~~~---~~~~~~~~L~~L~l 421 (428)
++++|++.+...- .+ .+++|+.|++.+|++...-- ..+..+|+|+.||-
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 7777776643332 22 67777777777777763211 23566777777763
No 30
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=3.1e-12 Score=107.15 Aligned_cols=261 Identities=20% Similarity=0.159 Sum_probs=132.5
Q ss_pred ccChHHHHHHhccc-ceEEEeecchhcccCCcceeeeecccccCCCCCcEEeccCCcCCCCchHhhhcCC--CCCEEEcc
Q 042919 10 KKPQELWHKFFQKG-SITYLSVEDSCRKTNGVPLTVFVNTGICELKNLVELDLSKNNLYGHLSPCLSNLT--HIKVLDLS 86 (428)
Q Consensus 10 ~~~~~~~~~~~~~~-~~~~l~~~~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~--~L~~L~l~ 86 (428)
..|+|+...+|+.- .-+.+.+.+.|..|+...- .=..-+.+++.+-++. |..+..+. ....+.+.
T Consensus 100 slpDEill~IFs~L~kk~LL~~~~VC~Rfyr~~~---------de~lW~~lDl~~r~i~---p~~l~~l~~rgV~v~Rla 167 (419)
T KOG2120|consen 100 SLPDEILLGIFSCLCKKELLKVSGVCKRFYRLAS---------DESLWQTLDLTGRNIH---PDVLGRLLSRGVIVFRLA 167 (419)
T ss_pred cCCHHHHHHHHHhccHHHHHHHHHHHHHHhhccc---------cccceeeeccCCCccC---hhHHHHHHhCCeEEEEcc
Confidence 35888766666543 4445888899999988762 2245667787766554 33333322 23333333
Q ss_pred CCccCcc-hhhhhc-cCCCCcEEeCCCCccCCccccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCC
Q 042919 87 SNQLTGN-LQSVIA-NIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSL 164 (428)
Q Consensus 87 ~~~~~~~-~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 164 (428)
...+... ....+. .=..|+++|++...++...-...++.|.+|+.|.+.+ .++
T Consensus 168 r~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg-------------------------~~L 222 (419)
T KOG2120|consen 168 RSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEG-------------------------LRL 222 (419)
T ss_pred hhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccccc-------------------------ccc
Confidence 2211110 111111 1124677777766555332233444555544444333 222
Q ss_pred -ccchhHhhhCCCccEEEccCCc-CCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCch
Q 042919 165 -QALPSILLQQLDLRFIDLSHNK-LQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGN 242 (428)
Q Consensus 165 -~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 242 (428)
..+...+..-.+|+.|+++++. ++......++++|+.|..|++++|..... .+...
T Consensus 223 dD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~----------------------~Vtv~ 280 (419)
T KOG2120|consen 223 DDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTE----------------------KVTVA 280 (419)
T ss_pred CcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccch----------------------hhhHH
Confidence 2344455555667777777664 44444455566666666666666654321 11111
Q ss_pred hhhcCCCCcEEEccCCCCC--CC-CCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCccccccc---ccC
Q 042919 243 MGKILPELLSLNLSENGFE--GR-IPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEV---VFP 316 (428)
Q Consensus 243 ~~~~~~~L~~L~l~~~~~~--~~-~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~---~~~ 316 (428)
+...-+.|..|+++++.-. .. ...-...+|.|.+|+++.|..........+..++.|++|.++.|.-.... .+.
T Consensus 281 V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~i~p~~~~~l~ 360 (419)
T KOG2120|consen 281 VAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYDIIPETLLELN 360 (419)
T ss_pred HhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcCCChHHeeeec
Confidence 1222244555555554211 00 11112356666666666665443333344445666666666666533222 256
Q ss_pred CCCCcceeecccC
Q 042919 317 NSTNLCWLYLNNN 329 (428)
Q Consensus 317 ~~~~L~~L~l~~~ 329 (428)
..|+|.+|++.+|
T Consensus 361 s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 361 SKPSLVYLDVFGC 373 (419)
T ss_pred cCcceEEEEeccc
Confidence 6777777777766
No 31
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.12 E-value=1.2e-12 Score=114.52 Aligned_cols=296 Identities=18% Similarity=0.127 Sum_probs=134.1
Q ss_pred CCCEEEccCCccCc--chhhhhccCCCCcEEeCCCCccCCc-cccccccCCCCCcEEEccCCccccccCCCCCCCcCCcc
Q 042919 79 HIKVLDLSSNQLTG--NLQSVIANIKSLEYLSLDDNNFEGL-FSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLK 155 (428)
Q Consensus 79 ~L~~L~l~~~~~~~--~~~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~ 155 (428)
.|+.|.+++++-.. ..-..-.++++++.|.+.+|...+. .-...-..|++|+++++..|.. ++
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~--------------iT 204 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSS--------------IT 204 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccch--------------hH
Confidence 46666676664331 1222335566777776666643222 1112223455555555443211 00
Q ss_pred EEEcCCCCCccchhHhhhCCCccEEEccCCc-CCCCCchhhhhcCCCCCEEEecCCccCCccc---CCCCCCCccEEecC
Q 042919 156 ALNLRNCSLQALPSILLQQLDLRFIDLSHNK-LQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQ---LPSSKHDLLRLDIS 231 (428)
Q Consensus 156 ~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~---~~~~~~~L~~L~l~ 231 (428)
. ..+......+++|+.+++++|+ +.+.....+.+++..++.+...+|.-..... ....++.+.++++.
T Consensus 205 ~--------~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~ 276 (483)
T KOG4341|consen 205 D--------VSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQ 276 (483)
T ss_pred H--------HHHHHHHHhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchh
Confidence 0 0111223445555555555554 3333333444455555555444443222111 11233334444444
Q ss_pred CCcc-ccCCCchhhhcCCCCcEEEccCCC-CCCCCCcc-ccCCCCCCEEECcCcccCCCCchhhh-cCCCCCCEEeCCCc
Q 042919 232 HNKF-SCQLPGNMGKILPELLSLNLSENG-FEGRIPSS-MSEMKRLESLDLSSNNFSGELPRQFL-SGCFSLSFLSLSDN 307 (428)
Q Consensus 232 ~~~~-~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~-l~~~~~L~~L~l~~~~~~~~~~~~~~-~~~~~L~~L~l~~~ 307 (428)
.|.. ++.....+..++..|+.+..+++. +++..... ..++.+|+.+.+..|+--++.....+ .+++.|+.+++.++
T Consensus 277 ~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~ 356 (483)
T KOG4341|consen 277 HCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEEC 356 (483)
T ss_pred hhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhccccc
Confidence 4432 222223344445666666666653 22222222 23556666666666653222222222 34556666666555
Q ss_pred ccccccc----cCCCCCcceeecccCcc-Cccchhhh----hcCCCCcEEEccCCcc-cccCCcccCCCCCCcEEeCCCC
Q 042919 308 HLQGEVV----FPNSTNLCWLYLNNNHF-SGKIQDGL----SKATSLLELDLSNNML-YGQIPPWFGNLSGLQFLDISEN 377 (428)
Q Consensus 308 ~~~~~~~----~~~~~~L~~L~l~~~~~-~~~~~~~l----~~~~~L~~L~l~~~~i-~~~~~~~~~~~~~L~~L~L~~~ 377 (428)
....... -.+++.|+.++++.|.. +++....+ .....|..+.+.+++. ++.....+..++.|+.+++-+|
T Consensus 357 ~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~ 436 (483)
T KOG4341|consen 357 GLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDC 436 (483)
T ss_pred ceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeech
Confidence 4332221 34566677777766643 22211111 2345566666666643 3334445555666666666666
Q ss_pred c-CCcCCCCcc--ccccCceEE
Q 042919 378 Q-LCGSVPSSF--NLSSLRRLY 396 (428)
Q Consensus 378 ~-~~~~~~~~~--~~~~L~~L~ 396 (428)
. ++......+ .+|+++..-
T Consensus 437 q~vtk~~i~~~~~~lp~i~v~a 458 (483)
T KOG4341|consen 437 QDVTKEAISRFATHLPNIKVHA 458 (483)
T ss_pred hhhhhhhhHHHHhhCccceehh
Confidence 3 333333333 455554443
No 32
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.07 E-value=6.9e-11 Score=99.34 Aligned_cols=230 Identities=21% Similarity=0.153 Sum_probs=143.4
Q ss_pred cchhHhhhCCCccEEEccCCcC--C------CCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCcccc
Q 042919 166 ALPSILLQQLDLRFIDLSHNKL--Q------GIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSC 237 (428)
Q Consensus 166 ~l~~~~~~~~~L~~L~l~~~~~--~------~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 237 (428)
.+...+..+.+|+.|.+++..- . ...+.. +....+|+.+.++.|.-.........-|.|+.+......+.
T Consensus 173 d~~hildf~~~l~~l~vs~~~~p~~~sni~~~~l~f~-l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~- 250 (490)
T KOG1259|consen 173 DFSHVLDFCTQLVALVVTPVKDPIDRSNIIPNRLSFN-LNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQ- 250 (490)
T ss_pred chHHHHHhhhheeEEEecCCCCCCccccccccccccc-hHHhhhhheeeeeccchhheeceeecCchhheeeeeccccc-
Confidence 3444555566777777665421 1 111111 23456777888887776655555556677777777665543
Q ss_pred CCCchhhhcCCCCcEEEccCC-CCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccC
Q 042919 238 QLPGNMGKILPELLSLNLSEN-GFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFP 316 (428)
Q Consensus 238 ~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 316 (428)
..+..+ + ...+....-..- -..+.....+...+.|+++++++|.+. .+++. ..-.|.++.|+++.|.+.....+.
T Consensus 251 ~~~~l~-p-e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDES-vKL~Pkir~L~lS~N~i~~v~nLa 326 (490)
T KOG1259|consen 251 DVPSLL-P-ETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDES-VKLAPKLRRLILSQNRIRTVQNLA 326 (490)
T ss_pred cccccc-c-hhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhh-hhhccceeEEeccccceeeehhhh
Confidence 111111 0 111111111111 111222233444567888899988876 55544 345688899999999888777788
Q ss_pred CCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc--ccccCce
Q 042919 317 NSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF--NLSSLRR 394 (428)
Q Consensus 317 ~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~--~~~~L~~ 394 (428)
.+++|+.|++++|.++.. ...-..+-+++.|.+.+|.|. ...++..+-+|..||+++|++........ .+|-|+.
T Consensus 327 ~L~~L~~LDLS~N~Ls~~-~Gwh~KLGNIKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~ 403 (490)
T KOG1259|consen 327 ELPQLQLLDLSGNLLAEC-VGWHLKLGNIKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLET 403 (490)
T ss_pred hcccceEeecccchhHhh-hhhHhhhcCEeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHH
Confidence 888999999998877632 222345678888999888874 23567778888999999998765333222 7888999
Q ss_pred EEccCCcCCc
Q 042919 395 LYMHMNAFNG 404 (428)
Q Consensus 395 L~l~~~~~~~ 404 (428)
+.+.+|++..
T Consensus 404 l~L~~NPl~~ 413 (490)
T KOG1259|consen 404 LRLTGNPLAG 413 (490)
T ss_pred HhhcCCCccc
Confidence 9999998874
No 33
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=9.7e-12 Score=104.20 Aligned_cols=177 Identities=23% Similarity=0.197 Sum_probs=112.9
Q ss_pred CccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCccc-CCCCchhhhcCCCCCCEE
Q 042919 224 DLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNF-SGELPRQFLSGCFSLSFL 302 (428)
Q Consensus 224 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~~~~~~~~~~~~~L~~L 302 (428)
.++.+|++...++......+.+.|.+|+.|.+.+.++.+.+...++...+|+.+++++|.. ++......+..|..|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 4777777777765444455555578888888888888776667777778888888888753 323334456778888888
Q ss_pred eCCCcccccccc----cCCCCCcceeecccCcc--Cccchhh-hhcCCCCcEEEccCCc-ccccCCcccCCCCCCcEEeC
Q 042919 303 SLSDNHLQGEVV----FPNSTNLCWLYLNNNHF--SGKIQDG-LSKATSLLELDLSNNM-LYGQIPPWFGNLSGLQFLDI 374 (428)
Q Consensus 303 ~l~~~~~~~~~~----~~~~~~L~~L~l~~~~~--~~~~~~~-l~~~~~L~~L~l~~~~-i~~~~~~~~~~~~~L~~L~L 374 (428)
++++|....... -.--++|+.|+++|+.- .....+. ...+++|.+||+++|. ++...-..+-+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 888887665443 23346777788877742 1112222 3457777777777763 44333334556777777777
Q ss_pred CCCcCCcCCCCcc----ccccCceEEccCCcC
Q 042919 375 SENQLCGSVPSSF----NLSSLRRLYMHMNAF 402 (428)
Q Consensus 375 ~~~~~~~~~~~~~----~~~~L~~L~l~~~~~ 402 (428)
+.|... +|+.+ ..|+|++|++.||--
T Consensus 346 sRCY~i--~p~~~~~l~s~psl~yLdv~g~vs 375 (419)
T KOG2120|consen 346 SRCYDI--IPETLLELNSKPSLVYLDVFGCVS 375 (419)
T ss_pred hhhcCC--ChHHeeeeccCcceEEEEeccccC
Confidence 777642 22222 567777777777643
No 34
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.98 E-value=2.4e-11 Score=106.53 Aligned_cols=272 Identities=21% Similarity=0.147 Sum_probs=149.4
Q ss_pred ccEEEcCCCCC---ccchhHhhhCCCccEEEccCCc-CCCCCchhhhhcCCCCCEEEecCCccCC---cccCCCCCCCcc
Q 042919 154 LKALNLRNCSL---QALPSILLQQLDLRFIDLSHNK-LQGIFPSWLLQNNTKLDTLYLLNNSLSG---NFQLPSSKHDLL 226 (428)
Q Consensus 154 L~~L~l~~~~~---~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~---~~~~~~~~~~L~ 226 (428)
|+++.+.++.- ..+-....++|+++.|.+.+|. +++.....+...|++++.+.+..|..-. .......+++|+
T Consensus 140 lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~ 219 (483)
T KOG4341|consen 140 LKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLK 219 (483)
T ss_pred cccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHH
Confidence 77777777643 5556667788888888888775 5555555666778888888887754322 111334677888
Q ss_pred EEecCCCc-cccCCCchhhhcCCCCcEEEccCCCCCC-C-CCccccCCCCCCEEECcCcccCCCCc-hhhhcCCCCCCEE
Q 042919 227 RLDISHNK-FSCQLPGNMGKILPELLSLNLSENGFEG-R-IPSSMSEMKRLESLDLSSNNFSGELP-RQFLSGCFSLSFL 302 (428)
Q Consensus 227 ~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~-~~~~l~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~~L~~L 302 (428)
++++++|. +.+.....+.+++..++.+...+|.-.. . ....-..++.+.++++..|....+.. ..+-..+..|+.+
T Consensus 220 ~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l 299 (483)
T KOG4341|consen 220 YLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVL 299 (483)
T ss_pred HhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhh
Confidence 88888776 3444444555566666666666653211 0 01111234445555555554222222 2222345666666
Q ss_pred eCCCcccccccc----cCCCCCcceeecccCc-cCccchhhh-hcCCCCcEEEccCCccc-c-cCCcccCCCCCCcEEeC
Q 042919 303 SLSDNHLQGEVV----FPNSTNLCWLYLNNNH-FSGKIQDGL-SKATSLLELDLSNNMLY-G-QIPPWFGNLSGLQFLDI 374 (428)
Q Consensus 303 ~l~~~~~~~~~~----~~~~~~L~~L~l~~~~-~~~~~~~~l-~~~~~L~~L~l~~~~i~-~-~~~~~~~~~~~L~~L~L 374 (428)
..+++.-..... ..++++|+.|.+.+|. +++.....+ .+++.|+.+++..+... + .+...-.+++.|+.+.+
T Consensus 300 ~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lsl 379 (483)
T KOG4341|consen 300 CYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSL 379 (483)
T ss_pred cccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCCh
Confidence 666654333222 3456677777776664 222222222 24566777766666432 1 12233345667777777
Q ss_pred CCCcC-CcCCCCcc-----ccccCceEEccCCcCC-ccCCcccccCCCCCEEECCCCc
Q 042919 375 SENQL-CGSVPSSF-----NLSSLRRLYMHMNAFN-GSIPGALRRSLSLTVLDLRDNE 425 (428)
Q Consensus 375 ~~~~~-~~~~~~~~-----~~~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~ 425 (428)
+.|.. ++.....+ ....|+.+.+++|+.+ +..-+.+..|++|+.+++-+|.
T Consensus 380 shce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 380 SHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 76643 32211111 3456666777777654 2233445566677777766663
No 35
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.94 E-value=3e-09 Score=99.58 Aligned_cols=197 Identities=34% Similarity=0.437 Sum_probs=118.4
Q ss_pred EEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCC-CCcEEEccCCCCCCCCCccccCCCCCCEEECcCc
Q 042919 204 TLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILP-ELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSN 282 (428)
Q Consensus 204 ~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (428)
.+....+..............++.+++.++.++ +++..... .. +|+.|+++++.+. ..+..+..++.|+.|+++.|
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~-~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGL-LKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccc-cCcccccc-chhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 456666655443333444466777777777776 44444432 32 6777777777776 33345667777777777777
Q ss_pred ccCCCCchhhhcCCCCCCEEeCCCccccccccc-CCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCc
Q 042919 283 NFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVF-PNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPP 361 (428)
Q Consensus 283 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~ 361 (428)
++. +++... ...+.|+.+++++|.+...... .....|++|.+.+|... .....+.++..+..+.+.++++. ..+.
T Consensus 174 ~l~-~l~~~~-~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLL-SNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhh-hhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 766 444321 2466777777777777665553 34455777777766432 23344556666666666666665 3355
Q ss_pred ccCCCCCCcEEeCCCCcCCcCCCCccccccCceEEccCCcCCccCCc
Q 042919 362 WFGNLSGLQFLDISENQLCGSVPSSFNLSSLRRLYMHMNAFNGSIPG 408 (428)
Q Consensus 362 ~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 408 (428)
.++.++.+++|++++|.++.... .....+++.|+++++.+....+.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceecccccccccccc-ccccCccCEEeccCccccccchh
Confidence 56666667777777777664444 22566777777777766644443
No 36
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.93 E-value=1.2e-09 Score=109.64 Aligned_cols=82 Identities=20% Similarity=0.204 Sum_probs=39.0
Q ss_pred CCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCc--cCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcE
Q 042919 54 KNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQ--LTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQV 131 (428)
Q Consensus 54 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~--~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~ 131 (428)
...|...+.++.+. ..+.. ..++.|++|-+.++. +.......|..++.|+.|++++|.-. ...|..++.+-+|++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l-~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSL-SKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchh-hccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCcc-CcCChHHhhhhhhhc
Confidence 44455555555443 11111 133456666666653 33233334556666666666654321 112345555555555
Q ss_pred EEccCCc
Q 042919 132 FKLSNSL 138 (428)
Q Consensus 132 L~l~~~~ 138 (428)
|+++++.
T Consensus 600 L~L~~t~ 606 (889)
T KOG4658|consen 600 LDLSDTG 606 (889)
T ss_pred ccccCCC
Confidence 4444443
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=8.6e-10 Score=72.72 Aligned_cols=60 Identities=35% Similarity=0.499 Sum_probs=43.4
Q ss_pred CCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECCCCcc
Q 042919 367 SGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEF 426 (428)
Q Consensus 367 ~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 426 (428)
|+|++|++++|+++...+..+ .+++|+.|++++|.+....+..|..+++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 467777777777776666666 677777777777777766667777777777777777765
No 38
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.90 E-value=3.9e-09 Score=98.82 Aligned_cols=197 Identities=32% Similarity=0.408 Sum_probs=123.3
Q ss_pred EEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCC-CccEEEccCCcCCCCCchhhhhcCCCCCEEEecC
Q 042919 131 VFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQL-DLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLN 209 (428)
Q Consensus 131 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 209 (428)
.++...+............+ .++.+.+.++.+..++....... +|+.|+++++.+.... .. ...+++|+.|+++.
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~--~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~-~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISELLELT--NLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SP-LRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhhhccc--ceeEEecCCcccccCccccccchhhcccccccccchhhhh-hh-hhccccccccccCC
Confidence 45666555433333333332 37888888888888887777774 8888888888877431 11 25677888888888
Q ss_pred CccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCc
Q 042919 210 NSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELP 289 (428)
Q Consensus 210 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 289 (428)
|.+..........+.|+.|+++++.+. .++..... ..+|+++.+++|... ..+..+..++.+..+.+.++++. ..+
T Consensus 173 N~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~-~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 173 NDLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIEL-LSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred chhhhhhhhhhhhhhhhheeccCCccc-cCchhhhh-hhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 877765444446677777777777776 55554322 445777777777433 34455666666666666666654 211
Q ss_pred hhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCccch
Q 042919 290 RQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQ 336 (428)
Q Consensus 290 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 336 (428)
.....++.++.|++++|.+.....+....+++.|+++++.+....+
T Consensus 249 -~~~~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 249 -ESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred -chhccccccceeccccccccccccccccCccCEEeccCccccccch
Confidence 2244566677777777776666556666777777777666654433
No 39
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.86 E-value=7.7e-11 Score=107.36 Aligned_cols=186 Identities=25% Similarity=0.337 Sum_probs=97.0
Q ss_pred EEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCccc
Q 042919 205 LYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNF 284 (428)
Q Consensus 205 L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 284 (428)
.+++.|++.........+..|+.+.+..|.+. .++..++. +..|..++++.|++. ..|..++.+| |+.|-+++|++
T Consensus 80 aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~-L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFSELPEEACAFVSLESLILYHNCIR-TIPEAICN-LEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccccCchHHHHHHHHHHHHHHhccce-ecchhhhh-hhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 34444444433333334444444444444443 34444443 455555555555555 3444444444 55555555555
Q ss_pred CCCCchhhhcCCCCCCEEeCCCcccccccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCccc
Q 042919 285 SGELPRQFLSGCFSLSFLSLSDNHLQGEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWF 363 (428)
Q Consensus 285 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~ 363 (428)
+ .+|... +..+.|..|+.+.|.+..... +..+.+|+.|.+..|++.+ .++.+. .-.|..||++.|++. .+|..|
T Consensus 156 ~-~lp~~i-g~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~-lp~El~-~LpLi~lDfScNkis-~iPv~f 230 (722)
T KOG0532|consen 156 T-SLPEEI-GLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLED-LPEELC-SLPLIRLDFSCNKIS-YLPVDF 230 (722)
T ss_pred c-cCCccc-ccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhh-CCHHHh-CCceeeeecccCcee-ecchhh
Confidence 4 444442 245555555666665554444 5556666666666666553 333333 334666666666666 666666
Q ss_pred CCCCCCcEEeCCCCcCCcCCCCcc----ccccCceEEccCC
Q 042919 364 GNLSGLQFLDISENQLCGSVPSSF----NLSSLRRLYMHMN 400 (428)
Q Consensus 364 ~~~~~L~~L~L~~~~~~~~~~~~~----~~~~L~~L~l~~~ 400 (428)
..+.+|+.|-|.+|++. .++.++ ...--++|+...|
T Consensus 231 r~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 231 RKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 66666666666666665 444333 2334445555555
No 40
>PLN03150 hypothetical protein; Provisional
Probab=98.86 E-value=6.8e-09 Score=101.87 Aligned_cols=106 Identities=36% Similarity=0.575 Sum_probs=88.6
Q ss_pred CcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEcc
Q 042919 320 NLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMH 398 (428)
Q Consensus 320 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~ 398 (428)
.++.|+|+++.+.+..+..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+++..+..+ .+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37788888888887888888888899999999988888888888888899999999998888888777 78889999999
Q ss_pred CCcCCccCCcccccC-CCCCEEECCCCc
Q 042919 399 MNAFNGSIPGALRRS-LSLTVLDLRDNE 425 (428)
Q Consensus 399 ~~~~~~~~~~~~~~~-~~L~~L~l~~~~ 425 (428)
+|.+.+..|..++.. .++..+++.+|+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCc
Confidence 998888888877653 467788888775
No 41
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.81 E-value=9.6e-11 Score=106.74 Aligned_cols=189 Identities=29% Similarity=0.385 Sum_probs=128.1
Q ss_pred ccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeC
Q 042919 225 LLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSL 304 (428)
Q Consensus 225 L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 304 (428)
-...+++.|.+. .++..+.. +..|+.+.+..|.+. ..+..+.++..|+.++++.|++. ..+...+ .--|+.|-+
T Consensus 77 t~~aDlsrNR~~-elp~~~~~-f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC--~lpLkvli~ 150 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACA-FVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLC--DLPLKVLIV 150 (722)
T ss_pred hhhhhccccccc-cCchHHHH-HHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhh--cCcceeEEE
Confidence 345677888877 67777665 677888888888887 56778888899999999999886 5665532 336777777
Q ss_pred CCcccccccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCC
Q 042919 305 SDNHLQGEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSV 383 (428)
Q Consensus 305 ~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~ 383 (428)
++|++..... ++..+.|..|+.+.|++. ..+..+..+.+|+.|.+..|.+. .+|+.++.+| |.+||+++|+++ .+
T Consensus 151 sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~i 226 (722)
T KOG0532|consen 151 SNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YL 226 (722)
T ss_pred ecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ec
Confidence 7777665443 556677777777777765 34555666777777777777766 5555566444 777777777777 44
Q ss_pred CCcc-ccccCceEEccCCcCCccCCccc---ccCCCCCEEECCCC
Q 042919 384 PSSF-NLSSLRRLYMHMNAFNGSIPGAL---RRSLSLTVLDLRDN 424 (428)
Q Consensus 384 ~~~~-~~~~L~~L~l~~~~~~~~~~~~~---~~~~~L~~L~l~~~ 424 (428)
|..+ .+..|+.|-|.+|++. .-|..+ ++..-.++|+..-|
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred chhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 4444 7777777777777776 434322 33445566666555
No 42
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.5e-09 Score=69.76 Aligned_cols=59 Identities=42% Similarity=0.520 Sum_probs=28.0
Q ss_pred CcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCc
Q 042919 320 NLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQ 378 (428)
Q Consensus 320 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~ 378 (428)
+|++|++++|.+.......|..+++|++|++++|.++...+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444444455555555444443344444444555555544443
No 43
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.74 E-value=1.8e-09 Score=89.65 Aligned_cols=234 Identities=21% Similarity=0.194 Sum_probs=154.6
Q ss_pred hHhhhCCCccEEEccCCcCCCCCchhhhhcC---CCCCEEEecCCcc-----------CCcccCCCCCCCccEEecCCCc
Q 042919 169 SILLQQLDLRFIDLSHNKLQGIFPSWLLQNN---TKLDTLYLLNNSL-----------SGNFQLPSSKHDLLRLDISHNK 234 (428)
Q Consensus 169 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~---~~L~~L~l~~~~~-----------~~~~~~~~~~~~L~~L~l~~~~ 234 (428)
..+..+..++.+++++|.+......++.... .+|+..++++--. .-....+..||+|+..++++|.
T Consensus 24 eel~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNA 103 (388)
T COG5238 24 EELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNA 103 (388)
T ss_pred HHHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccc
Confidence 4444456677777777776655555443333 3344444433211 1122345688999999999998
Q ss_pred cccCCCchhhh---cCCCCcEEEccCCCCCCCCCcc-------------ccCCCCCCEEECcCcccCCCCchh----hhc
Q 042919 235 FSCQLPGNMGK---ILPELLSLNLSENGFEGRIPSS-------------MSEMKRLESLDLSSNNFSGELPRQ----FLS 294 (428)
Q Consensus 235 ~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~~~-------------l~~~~~L~~L~l~~~~~~~~~~~~----~~~ 294 (428)
+....+..+.. .-+.|+.|.+++|.+..+...- ...-|.|+++.+.+|++. ..+.. .+.
T Consensus 104 fg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle-ngs~~~~a~~l~ 182 (388)
T COG5238 104 FGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE-NGSKELSAALLE 182 (388)
T ss_pred cCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc-cCcHHHHHHHHH
Confidence 87666654432 2467999999999886332221 234688999999999876 43322 223
Q ss_pred CCCCCCEEeCCCcccccccc-------cCCCCCcceeecccCccCcc----chhhhhcCCCCcEEEccCCcccccCCccc
Q 042919 295 GCFSLSFLSLSDNHLQGEVV-------FPNSTNLCWLYLNNNHFSGK----IQDGLSKATSLLELDLSNNMLYGQIPPWF 363 (428)
Q Consensus 295 ~~~~L~~L~l~~~~~~~~~~-------~~~~~~L~~L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~~~i~~~~~~~~ 363 (428)
.-..|+.+.+..|.|..... +..+.+|+.|+++.|.++.. ...+++.++.|+.|.+..|-+.......+
T Consensus 183 sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v 262 (388)
T COG5238 183 SHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSV 262 (388)
T ss_pred hhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHH
Confidence 34689999999999886543 56789999999999988743 34456677889999999987764433222
Q ss_pred ----C--CCCCCcEEeCCCCcCCcCCCCc-----c---ccccCceEEccCCcCC
Q 042919 364 ----G--NLSGLQFLDISENQLCGSVPSS-----F---NLSSLRRLYMHMNAFN 403 (428)
Q Consensus 364 ----~--~~~~L~~L~L~~~~~~~~~~~~-----~---~~~~L~~L~l~~~~~~ 403 (428)
. ..|+|..|...+|.+.+..... + ..|-|..|.+.||++.
T Consensus 263 ~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 263 LRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred HHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 1 3578899999998765433322 2 5788888888888886
No 44
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.73 E-value=1.4e-09 Score=101.99 Aligned_cols=195 Identities=27% Similarity=0.242 Sum_probs=83.0
Q ss_pred cCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEE
Q 042919 198 NNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESL 277 (428)
Q Consensus 198 ~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L 277 (428)
.+..++.+.++.+.+......+..+.+++.+++.++.+.. +...+. .+++|++|++++|.++.. ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~-~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEK-IENLLS-SLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccccceeeeeccccchhh-cccchh-hhhcchheeccccccccc--cchhhccchhhh
Confidence 3444555555555544322234445555555555555541 111111 145555555555555432 223444445555
Q ss_pred ECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcc
Q 042919 278 DLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNML 355 (428)
Q Consensus 278 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i 355 (428)
++.+|.+. .+.. +..+..|+.+++.+|.+..... ...+.+++.+.+.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~-~~~~--~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLIS-DISG--LESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcch-hccC--CccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 55555544 2221 2224455555555555444443 24445555555555444321 1111122222224444444
Q ss_pred cccCCcccCCCCC--CcEEeCCCCcCCcCCCCccccccCceEEccCCcCC
Q 042919 356 YGQIPPWFGNLSG--LQFLDISENQLCGSVPSSFNLSSLRRLYMHMNAFN 403 (428)
Q Consensus 356 ~~~~~~~~~~~~~--L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 403 (428)
+..- ++...+. |+.+++++|++.......-.+..+..|++.++++.
T Consensus 221 ~~~~--~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 221 SKLE--GLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred eecc--CcccchhHHHHHHhcccCccccccccccccccccccchhhcccc
Confidence 3111 1111122 55555555555422111114455555555555554
No 45
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.71 E-value=1.2e-08 Score=102.40 Aligned_cols=103 Identities=24% Similarity=0.212 Sum_probs=55.3
Q ss_pred ccEEEcCCCC--CccchhH-hhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEec
Q 042919 154 LKALNLRNCS--LQALPSI-LLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDI 230 (428)
Q Consensus 154 L~~L~l~~~~--~~~l~~~-~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l 230 (428)
|++|-+.++. +..++.. +..++.|++||+++|.-....|..+ +.+-+|++|+++++.+...+.....+..|.+|++
T Consensus 547 L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I-~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl 625 (889)
T KOG4658|consen 547 LRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSI-GELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNL 625 (889)
T ss_pred cceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHH-hhhhhhhcccccCCCccccchHHHHHHhhheecc
Confidence 5566555554 3444333 4446666666666655444555554 4566666666666666655555555556666666
Q ss_pred CCCccccCCCchhhhcCCCCcEEEccCC
Q 042919 231 SHNKFSCQLPGNMGKILPELLSLNLSEN 258 (428)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~ 258 (428)
.........+.... .+++|++|.+...
T Consensus 626 ~~~~~l~~~~~i~~-~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 626 EVTGRLESIPGILL-ELQSLRVLRLPRS 652 (889)
T ss_pred ccccccccccchhh-hcccccEEEeecc
Confidence 55543323322222 2566666665544
No 46
>PLN03150 hypothetical protein; Provisional
Probab=98.70 E-value=2.4e-08 Score=98.08 Aligned_cols=85 Identities=39% Similarity=0.577 Sum_probs=80.2
Q ss_pred CCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEEECC
Q 042919 344 SLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVLDLR 422 (428)
Q Consensus 344 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 422 (428)
.++.|+|+++.+.+.+|..+..+++|+.|+|++|.+.+..+..+ .+++|+.|++++|.+.+..|..++.+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999998999999999999999999999998888777 89999999999999999999999999999999999
Q ss_pred CCccCC
Q 042919 423 DNEFSG 428 (428)
Q Consensus 423 ~~~~~~ 428 (428)
+|+++|
T Consensus 499 ~N~l~g 504 (623)
T PLN03150 499 GNSLSG 504 (623)
T ss_pred CCcccc
Confidence 999987
No 47
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.70 E-value=1.9e-09 Score=101.02 Aligned_cols=237 Identities=31% Similarity=0.325 Sum_probs=103.3
Q ss_pred ccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCC
Q 042919 154 LKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHN 233 (428)
Q Consensus 154 L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~ 233 (428)
++.+++..+.++.+-..+..+.+|+.|++.+|.+... ......+++|+.|++++|
T Consensus 74 l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i-------------------------~~~l~~~~~L~~L~ls~N 128 (414)
T KOG0531|consen 74 LKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKI-------------------------ENLLSSLVNLQVLDLSFN 128 (414)
T ss_pred HHhhccchhhhhhhhcccccccceeeeeccccchhhc-------------------------ccchhhhhcchheecccc
Confidence 4455555555544333344455555555555555433 222334444445555554
Q ss_pred ccccCCCchhhhcCCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCch-hhhcCCCCCCEEeCCCcccccc
Q 042919 234 KFSCQLPGNMGKILPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPR-QFLSGCFSLSFLSLSDNHLQGE 312 (428)
Q Consensus 234 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~ 312 (428)
.++.... +.. ++.|+.|++.+|.+... ..+..++.|+.++++.|.+. .+.. . ...+..++.+.+.+|.+...
T Consensus 129 ~I~~i~~--l~~-l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~-~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 129 KITKLEG--LST-LTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIV-DIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred ccccccc--hhh-ccchhhheeccCcchhc--cCCccchhhhcccCCcchhh-hhhhhh-hhhccchHHHhccCCchhcc
Confidence 4432111 111 33455555555555422 23334555555555555544 2222 1 23445555555555555544
Q ss_pred cccCCCCCcceeecccCccCccchhhhhcCC--CCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCccccc
Q 042919 313 VVFPNSTNLCWLYLNNNHFSGKIQDGLSKAT--SLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSFNLS 390 (428)
Q Consensus 313 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~--~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~ 390 (428)
..+..+..+..+++..+.+.... .+.... .|+.+++.++++. ..+..+..+..+..|++..+++....... ..+
T Consensus 202 ~~~~~~~~l~~~~l~~n~i~~~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~-~~~ 277 (414)
T KOG0531|consen 202 EGLDLLKKLVLLSLLDNKISKLE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLE-RLP 277 (414)
T ss_pred cchHHHHHHHHhhcccccceecc--CcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccccc-ccc
Confidence 44444444444444444443211 111112 2455555555554 22234444455555555555443221111 334
Q ss_pred cCceEEccCCcCCcc---CCcc-cccCCCCCEEECCCCcc
Q 042919 391 SLRRLYMHMNAFNGS---IPGA-LRRSLSLTVLDLRDNEF 426 (428)
Q Consensus 391 ~L~~L~l~~~~~~~~---~~~~-~~~~~~L~~L~l~~~~~ 426 (428)
.+..+....+.+... .... ....++++.+.+.++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 278 KLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred hHHHhccCcchhcchhhhhccccccccccccccccccCcc
Confidence 444444554444311 1111 23344555555555543
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.65 E-value=9.5e-09 Score=86.58 Aligned_cols=84 Identities=21% Similarity=0.271 Sum_probs=43.5
Q ss_pred CCCCcEEeCCCCccCCcccc-ccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCC--ccchhHhhhCCCc
Q 042919 101 IKSLEYLSLDDNNFEGLFSF-NSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSL--QALPSILLQQLDL 177 (428)
Q Consensus 101 l~~L~~L~l~~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~--~~l~~~~~~~~~L 177 (428)
++.++++++.+|.++++... ..+.++|.|++|+++.|.........+ .+..+|+.+.+.++.+ +.....+..+|.+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp-~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP-LPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc-ccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 44455555555555443221 123345555555555444433333332 3333577777777655 4455556666677
Q ss_pred cEEEccCC
Q 042919 178 RFIDLSHN 185 (428)
Q Consensus 178 ~~L~l~~~ 185 (428)
++|.++.|
T Consensus 149 telHmS~N 156 (418)
T KOG2982|consen 149 TELHMSDN 156 (418)
T ss_pred hhhhhccc
Confidence 77777766
No 49
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=3.1e-08 Score=83.53 Aligned_cols=204 Identities=19% Similarity=0.134 Sum_probs=116.6
Q ss_pred ccEEEcCCCCCccc---hhHhhhCCCccEEEccCCcCCCCCc-hhhhhcCCCCCEEEecCCccCCcccCC-CCCCCccEE
Q 042919 154 LKALNLRNCSLQAL---PSILLQQLDLRFIDLSHNKLQGIFP-SWLLQNNTKLDTLYLLNNSLSGNFQLP-SSKHDLLRL 228 (428)
Q Consensus 154 L~~L~l~~~~~~~l---~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~-~~~~~L~~L 228 (428)
++-+.+.++.+... ...-..++.++++++.+|.+.+... ..++.+++.|++|+++.|++....... ....+|+++
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 34455556655322 2333455678889999888876433 345678889999999988887655444 467788888
Q ss_pred ecCCCccccCCCchhhhcCCCCcEEEccCCCCCCC--CCcccc-CCCCCCEEECcCcccCCCCc-hhhhcCCCCCCEEeC
Q 042919 229 DISHNKFSCQLPGNMGKILPELLSLNLSENGFEGR--IPSSMS-EMKRLESLDLSSNNFSGELP-RQFLSGCFSLSFLSL 304 (428)
Q Consensus 229 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--~~~~l~-~~~~L~~L~l~~~~~~~~~~-~~~~~~~~~L~~L~l 304 (428)
.+.+..+.+.-...+.+.+|.++.|.++.|.+.-. ...... .-+.++++.+..|...--.. ......++++..+-+
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v 206 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFV 206 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheee
Confidence 88887776666666666677788888777743211 011111 22455666665554220000 111123456666666
Q ss_pred CCcccccccc---cCCCCCcceeecccCccCc-cchhhhhcCCCCcEEEccCCcccc
Q 042919 305 SDNHLQGEVV---FPNSTNLCWLYLNNNHFSG-KIQDGLSKATSLLELDLSNNMLYG 357 (428)
Q Consensus 305 ~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~-~~~~~l~~~~~L~~L~l~~~~i~~ 357 (428)
..|.+.+... ...++.+..|.+..+++.. ...+++..++.|..|.+.++++.+
T Consensus 207 ~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 207 CEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred ecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 6665443322 4444555555555555532 233455566666666666665543
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.49 E-value=7.9e-08 Score=80.11 Aligned_cols=161 Identities=21% Similarity=0.248 Sum_probs=88.7
Q ss_pred CCCCCcEEeccCCcCCCCchHhh----hcCCCCCEEEccCCccC---c-------chhhhhccCCCCcEEeCCCCccCCc
Q 042919 52 ELKNLVELDLSKNNLYGHLSPCL----SNLTHIKVLDLSSNQLT---G-------NLQSVIANIKSLEYLSLDDNNFEGL 117 (428)
Q Consensus 52 ~~~~L~~L~l~~~~~~~~~~~~~----~~l~~L~~L~l~~~~~~---~-------~~~~~~~~l~~L~~L~l~~~~~~~~ 117 (428)
.+..+.+++++||.|.......+ .+-.+|+..++++-... . .+..++.+||+|+.++++.|.+...
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 36778888999888865544444 45567777777654211 1 2234566788888888888876544
Q ss_pred ccc---ccccCCCCCcEEEccCCccccccCCCCC------------CCcCCccEEEcCCCCCccchh-----HhhhCCCc
Q 042919 118 FSF---NSLKNHSKLQVFKLSNSLVKIETEEFPG------------LPEYQLKALNLRNCSLQALPS-----ILLQQLDL 177 (428)
Q Consensus 118 ~~~---~~~~~~~~L~~L~l~~~~~~~~~~~~~~------------~~~~~L~~L~l~~~~~~~l~~-----~~~~~~~L 177 (428)
.+. ..+++...|++|.+++|.+....+.-.. ...+.|+.+....|.+...+. .+..-.+|
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~l 187 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENL 187 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCc
Confidence 332 3566777888888887776433322110 112236666666655533222 12222256
Q ss_pred cEEEccCCcCCCCCchhh----hhcCCCCCEEEecCCcc
Q 042919 178 RFIDLSHNKLQGIFPSWL----LQNNTKLDTLYLLNNSL 212 (428)
Q Consensus 178 ~~L~l~~~~~~~~~~~~~----~~~~~~L~~L~l~~~~~ 212 (428)
+++.+..|.+.......+ +.++.+|+.|++.+|.+
T Consensus 188 k~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtf 226 (388)
T COG5238 188 KEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTF 226 (388)
T ss_pred eeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccch
Confidence 666666555543322211 12445555555555544
No 51
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=2.1e-09 Score=100.92 Aligned_cols=126 Identities=27% Similarity=0.189 Sum_probs=83.9
Q ss_pred CCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccC
Q 042919 273 RLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSN 352 (428)
Q Consensus 273 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~ 352 (428)
.|.+.+++.|.+. .++ ..+.-++.++.|+++.|++.....+.++++|++|++++|.+..........+. |..|.+++
T Consensus 165 ~L~~a~fsyN~L~-~mD-~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrn 241 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMD-ESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRN 241 (1096)
T ss_pred hHhhhhcchhhHH-hHH-HHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhccccccchhhhh-heeeeecc
Confidence 4666677766654 222 22445677777777777777766777788888888887776543333333333 88888888
Q ss_pred CcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc--ccccCceEEccCCcCC
Q 042919 353 NMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF--NLSSLRRLYMHMNAFN 403 (428)
Q Consensus 353 ~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~--~~~~L~~L~l~~~~~~ 403 (428)
|.++.. .++.++.+|+.||+++|-+.+...-.. .+..|+.|+|.||++-
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 877633 457777888888888887765433222 6778888888888764
No 52
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.38 E-value=1e-08 Score=96.42 Aligned_cols=159 Identities=25% Similarity=0.233 Sum_probs=114.5
Q ss_pred cccccCCCCCcEEeccCCcCCCC---ch------------------Hhhh----------cCCCCCEEEccCCccCcchh
Q 042919 47 NTGICELKNLVELDLSKNNLYGH---LS------------------PCLS----------NLTHIKVLDLSSNQLTGNLQ 95 (428)
Q Consensus 47 ~~~~~~~~~L~~L~l~~~~~~~~---~~------------------~~~~----------~l~~L~~L~l~~~~~~~~~~ 95 (428)
|.+|..++.||.|.+++|++... .+ ..|. ....|.+.+++.|.++ ...
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 34567889999999999987531 00 0011 0123555566666555 455
Q ss_pred hhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCC
Q 042919 96 SVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQL 175 (428)
Q Consensus 96 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~ 175 (428)
.++.-++.++.|++++|++++. ..+..|++|++||++.|.....+..-.... +|..|++++|.+..+ ..+.++.
T Consensus 181 ~SLqll~ale~LnLshNk~~~v---~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc--~L~~L~lrnN~l~tL-~gie~Lk 254 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV---DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC--KLQLLNLRNNALTTL-RGIENLK 254 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh---HHHHhcccccccccccchhccccccchhhh--hheeeeecccHHHhh-hhHHhhh
Confidence 6677888999999999999887 578999999999999888755443322222 499999999988777 4577888
Q ss_pred CccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCcc
Q 042919 176 DLRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSL 212 (428)
Q Consensus 176 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 212 (428)
+|+.||++.|-+.+.-.-.++..+..|+.|++.+|++
T Consensus 255 sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 255 SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 9999999998777555444555677788888888865
No 53
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.21 E-value=8e-07 Score=87.34 Aligned_cols=80 Identities=23% Similarity=0.386 Sum_probs=45.6
Q ss_pred CCCcEEeccCCc-CCCCchHhh-hcCCCCCEEEccCCccC-cchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCc
Q 042919 54 KNLVELDLSKNN-LYGHLSPCL-SNLTHIKVLDLSSNQLT-GNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQ 130 (428)
Q Consensus 54 ~~L~~L~l~~~~-~~~~~~~~~-~~l~~L~~L~l~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~ 130 (428)
.+|++|+++|.. +....+..+ .-+|.|++|.+.+..+. ......+.++++|..||++++.++.+ ..++++++|+
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl---~GIS~LknLq 198 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL---SGISRLKNLQ 198 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc---HHHhccccHH
Confidence 456667776643 222233333 34677777777666543 22344556667777777777766655 4566666666
Q ss_pred EEEccC
Q 042919 131 VFKLSN 136 (428)
Q Consensus 131 ~L~l~~ 136 (428)
.|.+.+
T Consensus 199 ~L~mrn 204 (699)
T KOG3665|consen 199 VLSMRN 204 (699)
T ss_pred HHhccC
Confidence 655544
No 54
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.20 E-value=3.9e-06 Score=67.12 Aligned_cols=104 Identities=24% Similarity=0.194 Sum_probs=67.6
Q ss_pred CCCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCccccc-CCcccCCCCCCcEEeC
Q 042919 296 CFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQ-IPPWFGNLSGLQFLDI 374 (428)
Q Consensus 296 ~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~-~~~~~~~~~~L~~L~L 374 (428)
......+++++|.+.....+..++.|..|.+.+|+++...+..-..+++|..|.+.+|.|... --..++.||+|++|.+
T Consensus 41 ~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 41 LDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 345666777777777777777777777777777777755544444457777777777766532 1234667777777777
Q ss_pred CCCcCCcCCCCcc----ccccCceEEccC
Q 042919 375 SENQLCGSVPSSF----NLSSLRRLYMHM 399 (428)
Q Consensus 375 ~~~~~~~~~~~~~----~~~~L~~L~l~~ 399 (428)
-+|+++...--.. .+|+|+.||+.+
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhh
Confidence 7777764322111 567777777665
No 55
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.18 E-value=7.4e-07 Score=87.55 Aligned_cols=202 Identities=14% Similarity=0.125 Sum_probs=122.7
Q ss_pred CCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcc-------------hhhhh--ccCCCCcEEeCCCCccCC
Q 042919 52 ELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGN-------------LQSVI--ANIKSLEYLSLDDNNFEG 116 (428)
Q Consensus 52 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~-------------~~~~~--~~l~~L~~L~l~~~~~~~ 116 (428)
..-++..+++.+..........+.... |+++.+++...... +...+ ..-.+|++|++++.....
T Consensus 58 ~~f~ltki~l~~~~~~~~~~~~l~~~~-L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~~~s 136 (699)
T KOG3665|consen 58 RKFNLTKIDLKNVTLQHQTLEMLRKQD-LESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSELFS 136 (699)
T ss_pred hhheeEEeeccceecchhHHHHHhhcc-ccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccchhh
Confidence 445677777776665544444444443 77777765432210 00111 112478889998864322
Q ss_pred c-cccccccCCCCCcEEEccCCccccccCCCCCCCcCCccEEEcCCCCCccchhHhhhCCCccEEEccCCcCCCCCc-hh
Q 042919 117 L-FSFNSLKNHSKLQVFKLSNSLVKIETEEFPGLPEYQLKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQGIFP-SW 194 (428)
Q Consensus 117 ~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~-~~ 194 (428)
- .+.+.-..+|.|++|.+.+-.+..........+.++|..|++++++++.+ .++.++++|++|.+.+-.+..... ..
T Consensus 137 ~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L~mrnLe~e~~~~l~~ 215 (699)
T KOG3665|consen 137 NGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVLSMRNLEFESYQDLID 215 (699)
T ss_pred ccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHHhccCCCCCchhhHHH
Confidence 2 12233456889999998886664443222222334699999999999888 778888999999888877664222 23
Q ss_pred hhhcCCCCCEEEecCCccCCcc-------cCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEcc
Q 042919 195 LLQNNTKLDTLYLLNNSLSGNF-------QLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLS 256 (428)
Q Consensus 195 ~~~~~~~L~~L~l~~~~~~~~~-------~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~ 256 (428)
+ -.+++|+.|++|+....... +....+|+|+.||.++..+.......+...-|+|+.+..-
T Consensus 216 L-F~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~~ 283 (699)
T KOG3665|consen 216 L-FNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAAL 283 (699)
T ss_pred H-hcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhhh
Confidence 3 37899999999887654422 1233567788888877766655555444444556555544
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.15 E-value=2.2e-06 Score=51.57 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=19.3
Q ss_pred cCceEEccCCcCCccCCcccccCCCCCEEECCCCccC
Q 042919 391 SLRRLYMHMNAFNGSIPGALRRSLSLTVLDLRDNEFS 427 (428)
Q Consensus 391 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 427 (428)
+|++|++++|+++ .+|..+++|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4556666666655 34444556666666666666554
No 57
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=98.01 E-value=7.2e-07 Score=86.13 Aligned_cols=190 Identities=20% Similarity=0.059 Sum_probs=99.3
Q ss_pred hhCCCccEEEccCCc-CCCCCchhhhhcCCCCCEEEecCC-ccCC-----cccCCCCCCCccEEecCCCc-cccCCCchh
Q 042919 172 LQQLDLRFIDLSHNK-LQGIFPSWLLQNNTKLDTLYLLNN-SLSG-----NFQLPSSKHDLLRLDISHNK-FSCQLPGNM 243 (428)
Q Consensus 172 ~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~-~~~~-----~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~ 243 (428)
..+++|+.+.+.++. +.+.....+...++.|+.|+++++ .... .......+++|+.++++.+. +++.....+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 335677777777764 333333445567777777777763 1111 11233355667777777666 444444445
Q ss_pred hhcCCCCcEEEccCCC-CCCCCCc-cccCCCCCCEEECcCcccCCC-CchhhhcCCCCCCEEeCCCcccccccccCCCCC
Q 042919 244 GKILPELLSLNLSENG-FEGRIPS-SMSEMKRLESLDLSSNNFSGE-LPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTN 320 (428)
Q Consensus 244 ~~~~~~L~~L~l~~~~-~~~~~~~-~l~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 320 (428)
+..+++|+.|.+.+|. +++.... ....++.|++|+++.|....+ ........+++++.+.+.... .+..
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~--------~c~~ 336 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN--------GCPS 336 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC--------CCcc
Confidence 5556677777766665 3433222 223466677777776654311 111123345555554433322 1455
Q ss_pred cceeecccCccC---ccchhhhhcCCCCcEEEccCCcccccC-CcccCCCCCC
Q 042919 321 LCWLYLNNNHFS---GKIQDGLSKATSLLELDLSNNMLYGQI-PPWFGNLSGL 369 (428)
Q Consensus 321 L~~L~l~~~~~~---~~~~~~l~~~~~L~~L~l~~~~i~~~~-~~~~~~~~~L 369 (428)
++.+.+.++... ......+..++.++.+.+..+.+.... ...+.+|+.|
T Consensus 337 l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 337 LTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred HHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 555555544331 223334567788888888777644322 2334445544
No 58
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.98 E-value=8.6e-06 Score=65.22 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=61.5
Q ss_pred CCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCCCCCcEEE
Q 042919 54 KNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNHSKLQVFK 133 (428)
Q Consensus 54 ~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 133 (428)
.....++|++|.+... +.|..++.|++|.+.+|+|+...+..-..+++|..|.+.+|.+..+.+...+..||+|++|.
T Consensus 42 d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 3566777877776532 33667788888888888887666665566778888888888887777777777888877777
Q ss_pred ccCCccc
Q 042919 134 LSNSLVK 140 (428)
Q Consensus 134 l~~~~~~ 140 (428)
+-+|.+.
T Consensus 120 ll~Npv~ 126 (233)
T KOG1644|consen 120 LLGNPVE 126 (233)
T ss_pred ecCCchh
Confidence 7766653
No 59
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.93 E-value=7.6e-06 Score=49.20 Aligned_cols=36 Identities=44% Similarity=0.702 Sum_probs=17.2
Q ss_pred CCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCC
Q 042919 344 SLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLC 380 (428)
Q Consensus 344 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~ 380 (428)
+|++|++++|+|+ .+|..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4455555555554 33334555555555555555544
No 60
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.92 E-value=2.3e-06 Score=82.66 Aligned_cols=127 Identities=26% Similarity=0.259 Sum_probs=65.1
Q ss_pred CccEEEcCCCC-Ccc--chhHhhhCCCccEEEccCC-cCCCC---CchhhhhcCCCCCEEEecCCcc-CC--cccCCCCC
Q 042919 153 QLKALNLRNCS-LQA--LPSILLQQLDLRFIDLSHN-KLQGI---FPSWLLQNNTKLDTLYLLNNSL-SG--NFQLPSSK 222 (428)
Q Consensus 153 ~L~~L~l~~~~-~~~--l~~~~~~~~~L~~L~l~~~-~~~~~---~~~~~~~~~~~L~~L~l~~~~~-~~--~~~~~~~~ 222 (428)
.|+.+.+.++. +.. +......+++|+.|+++++ ..... ........+.+|+.++++++.. ++ .......+
T Consensus 189 ~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c 268 (482)
T KOG1947|consen 189 LLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRC 268 (482)
T ss_pred hhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhC
Confidence 46666666552 232 4455666667777777652 11111 1122344556677777766662 21 11112236
Q ss_pred CCccEEecCCCc-cccCCCchhhhcCCCCcEEEccCCCCC-CC-CCccccCCCCCCEEEC
Q 042919 223 HDLLRLDISHNK-FSCQLPGNMGKILPELLSLNLSENGFE-GR-IPSSMSEMKRLESLDL 279 (428)
Q Consensus 223 ~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~-~~~~l~~~~~L~~L~l 279 (428)
++|+.|.+..|. +++.....+...+++|+.|+++.|... +. ......++++++.+.+
T Consensus 269 ~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~ 328 (482)
T KOG1947|consen 269 PNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKL 328 (482)
T ss_pred CCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhh
Confidence 677777766665 455555555555667777777766442 11 1222334555555444
No 61
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.90 E-value=5.5e-07 Score=67.22 Aligned_cols=132 Identities=26% Similarity=0.219 Sum_probs=86.0
Q ss_pred CCCEEECcCcccCCCCch--hhhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEE
Q 042919 273 RLESLDLSSNNFSGELPR--QFLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLEL 348 (428)
Q Consensus 273 ~L~~L~l~~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L 348 (428)
.+..++++.|.+. .+.. ..+.....|..+++++|.+..... ...++..+.|++.+|.+.+ .++.++.++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisd-vPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISD-VPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhh-chHHHhhhHHhhhc
Confidence 3556777777654 2322 223455677778888888776654 3456688888888888874 44458888888888
Q ss_pred EccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCccccccCceEEccCCcCCccCC
Q 042919 349 DLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSFNLSSLRRLYMHMNAFNGSIP 407 (428)
Q Consensus 349 ~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 407 (428)
+++.|++. ..|+.+..+.++..|+..+|.+.......+.....-...+.+++..+..+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCc
Confidence 88888887 66666777788888888888776555554422222333345555554444
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.86 E-value=3.9e-05 Score=59.26 Aligned_cols=122 Identities=23% Similarity=0.302 Sum_probs=50.5
Q ss_pred hhhcCCCCCCEEeCCCc-ccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCC
Q 042919 291 QFLSGCFSLSFLSLSDN-HLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGL 369 (428)
Q Consensus 291 ~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L 369 (428)
..|.++.+|+.+.+... .......+..+++|+.+.+..+ +......+|.++.+++.+.+.+ .+.......|..++.|
T Consensus 6 ~~F~~~~~l~~i~~~~~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 6 NAFYNCSNLESITFPNTIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTTT-TT--EEEETST--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHHhCCCCCCEEEECCCeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 33444555555555421 1112223555556666666543 4444555666666677777755 3332344566667777
Q ss_pred cEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCC
Q 042919 370 QFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLT 417 (428)
Q Consensus 370 ~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 417 (428)
+.+++..+ +.......+ .+ .|+.+.+.+ .+..+-...|..|++|+
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 77777654 443444444 44 777777765 34435556677776664
No 63
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.82 E-value=0.00018 Score=65.50 Aligned_cols=136 Identities=17% Similarity=0.187 Sum_probs=71.8
Q ss_pred hcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcCCCCcEEEccCC-CCCCCCCccccCCCCCC
Q 042919 197 QNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKILPELLSLNLSEN-GFEGRIPSSMSEMKRLE 275 (428)
Q Consensus 197 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~l~~~~~L~ 275 (428)
..+.+++.|++++|.++..+ .-..+|++|.+++|.--..++..+ +++|++|++.+| .+. ..| ++|+
T Consensus 49 ~~~~~l~~L~Is~c~L~sLP---~LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~-sLP------~sLe 115 (426)
T PRK15386 49 EEARASGRLYIKDCDIESLP---VLPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEIS-GLP------ESVR 115 (426)
T ss_pred HHhcCCCEEEeCCCCCcccC---CCCCCCcEEEccCCCCcccCCchh---hhhhhheEccCccccc-ccc------cccc
Confidence 35688888888888766553 233468888887765433445433 357888888877 332 222 3466
Q ss_pred EEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccc--cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCC
Q 042919 276 SLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNN 353 (428)
Q Consensus 276 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~ 353 (428)
+|++..+... .+. .-+++|+.|.+.++....... -.-.++|++|++.+|.... .+..+ ..+|+.|+++.+
T Consensus 116 ~L~L~~n~~~-~L~----~LPssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i~-LP~~L--P~SLk~L~ls~n 187 (426)
T PRK15386 116 SLEIKGSATD-SIK----NVPNGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNII-LPEKL--PESLQSITLHIE 187 (426)
T ss_pred eEEeCCCCCc-ccc----cCcchHhheeccccccccccccccccCCcccEEEecCCCccc-Ccccc--cccCcEEEeccc
Confidence 6666544332 111 113456666664322111111 1122566667776665431 22222 246666666554
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.76 E-value=0.00015 Score=66.07 Aligned_cols=134 Identities=14% Similarity=0.175 Sum_probs=86.8
Q ss_pred CCCCcEEEccCCCCCCCCCccccCCCCCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCc-ccccccccCCCCCcceee
Q 042919 247 LPELLSLNLSENGFEGRIPSSMSEMKRLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDN-HLQGEVVFPNSTNLCWLY 325 (428)
Q Consensus 247 ~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~L~~L~ 325 (428)
+.+++.|++++|.+.. .| .-.++|++|.+++|.-...++... +.+|+.|.+++| .+. .-.++|+.|+
T Consensus 51 ~~~l~~L~Is~c~L~s-LP---~LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~-----sLP~sLe~L~ 118 (426)
T PRK15386 51 ARASGRLYIKDCDIES-LP---VLPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEIS-----GLPESVRSLE 118 (426)
T ss_pred hcCCCEEEeCCCCCcc-cC---CCCCCCcEEEccCCCCcccCCchh---hhhhhheEccCccccc-----ccccccceEE
Confidence 6889999999998773 44 123469999999876543555432 468999999988 433 2245788888
Q ss_pred cccCccCccchhhhhc-CCCCcEEEccCCc-cc-ccCCcccCCCCCCcEEeCCCCcCCcCCCCccccccCceEEccCCc
Q 042919 326 LNNNHFSGKIQDGLSK-ATSLLELDLSNNM-LY-GQIPPWFGNLSGLQFLDISENQLCGSVPSSFNLSSLRRLYMHMNA 401 (428)
Q Consensus 326 l~~~~~~~~~~~~l~~-~~~L~~L~l~~~~-i~-~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~L~~L~l~~~~ 401 (428)
+.++.... +.. .++|+.|.+.++. .. ...+.. -.++|+.|++++|... ..+..+ ..+|+.|+++.+.
T Consensus 119 L~~n~~~~-----L~~LPssLk~L~I~~~n~~~~~~lp~~--LPsSLk~L~Is~c~~i-~LP~~L-P~SLk~L~ls~n~ 188 (426)
T PRK15386 119 IKGSATDS-----IKNVPNGLTSLSINSYNPENQARIDNL--ISPSLKTLSLTGCSNI-ILPEKL-PESLQSITLHIEQ 188 (426)
T ss_pred eCCCCCcc-----cccCcchHhheeccccccccccccccc--cCCcccEEEecCCCcc-cCcccc-cccCcEEEecccc
Confidence 87654432 122 3568888875432 11 011211 1258999999999865 333332 4799999998763
No 65
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.67 E-value=0.00018 Score=55.55 Aligned_cols=87 Identities=22% Similarity=0.343 Sum_probs=43.3
Q ss_pred cccccCCCCCcEEeccCCcCCCCchHhhhcCCCCCEEEccCCccCcchhhhhccCCCCcEEeCCCCccCCccccccccCC
Q 042919 47 NTGICELKNLVELDLSKNNLYGHLSPCLSNLTHIKVLDLSSNQLTGNLQSVIANIKSLEYLSLDDNNFEGLFSFNSLKNH 126 (428)
Q Consensus 47 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 126 (428)
..+|.++++|+.+.+.. .+.......|..+++|+.+.+... +......+|..++.++.+.+.+ .+..+ +...+..+
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i-~~~~F~~~ 80 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSI-GDNAFSNC 80 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE--TTTTTT-
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccc-cccccccc
Confidence 34566777777777764 344444556777777777777664 5444555667776777777754 33222 12345556
Q ss_pred CCCcEEEccCC
Q 042919 127 SKLQVFKLSNS 137 (428)
Q Consensus 127 ~~L~~L~l~~~ 137 (428)
++|+.+.+..+
T Consensus 81 ~~l~~i~~~~~ 91 (129)
T PF13306_consen 81 TNLKNIDIPSN 91 (129)
T ss_dssp TTECEEEETTT
T ss_pred ccccccccCcc
Confidence 66666665443
No 66
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.64 E-value=3.7e-06 Score=62.90 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=16.6
Q ss_pred ccEEEcCCCCCccchhHhhhCCCccEEEccCCcCC
Q 042919 154 LKALNLRNCSLQALPSILLQQLDLRFIDLSHNKLQ 188 (428)
Q Consensus 154 L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~~~ 188 (428)
|+.++++.|.+...|..+..+.++-.|+..++...
T Consensus 102 Lr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 102 LRSLNLRFNPLNAEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhhcccccCccccchHHHHHHHhHHHhcCCCCccc
Confidence 44444444444444444444444444444444443
No 67
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=1e-05 Score=68.07 Aligned_cols=98 Identities=24% Similarity=0.223 Sum_probs=51.1
Q ss_pred CCCEEECcCcccCCCCchhhhcCCCCCCEEeCCCcccccccccCCCCCcceeecccCccCcc-chhhhhcCCCCcEEEcc
Q 042919 273 RLESLDLSSNNFSGELPRQFLSGCFSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGK-IQDGLSKATSLLELDLS 351 (428)
Q Consensus 273 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~l~~~~~L~~L~l~ 351 (428)
+.++|++.+|.+. ++ .+...++.|+.|.|+-|.|.....+..|++|++|+|..|.+.+. ....+.++++|+.|+|.
T Consensus 20 ~vkKLNcwg~~L~-DI--sic~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 20 NVKKLNCWGCGLD-DI--SICEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HhhhhcccCCCcc-HH--HHHHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 3445555555543 22 22344566666666666666666666666666666666655432 12334566666666666
Q ss_pred CCcccccCCc-----ccCCCCCCcEEe
Q 042919 352 NNMLYGQIPP-----WFGNLSGLQFLD 373 (428)
Q Consensus 352 ~~~i~~~~~~-----~~~~~~~L~~L~ 373 (428)
.|.-.+..+. .+.-+|+|++||
T Consensus 97 ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 97 ENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred cCCcccccchhHHHHHHHHcccchhcc
Confidence 5544332221 233455666554
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=5.8e-06 Score=69.52 Aligned_cols=82 Identities=26% Similarity=0.212 Sum_probs=40.2
Q ss_pred CCCCEEeCCCcccccccccCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccC-CcccCCCCCCcEEeCC
Q 042919 297 FSLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQI-PPWFGNLSGLQFLDIS 375 (428)
Q Consensus 297 ~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~-~~~~~~~~~L~~L~L~ 375 (428)
.+.++|+..+|.+.+......|+.|+.|.|+-|.++.. ..+..|++|++|+|..|.|.+.. -..+.++|+|+.|.|.
T Consensus 19 ~~vkKLNcwg~~L~DIsic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDISICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HHhhhhcccCCCccHHHHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 34455555555555554555555555555555555422 23445555555555555543210 1123445555555555
Q ss_pred CCcCC
Q 042919 376 ENQLC 380 (428)
Q Consensus 376 ~~~~~ 380 (428)
.|+-.
T Consensus 97 ENPCc 101 (388)
T KOG2123|consen 97 ENPCC 101 (388)
T ss_pred cCCcc
Confidence 55433
No 69
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.35 E-value=0.00011 Score=61.62 Aligned_cols=104 Identities=20% Similarity=0.196 Sum_probs=74.8
Q ss_pred cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCC--cccccCCcccCCCCCCcEEeCCCCcCCcCCCCc--c-cc
Q 042919 315 FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNN--MLYGQIPPWFGNLSGLQFLDISENQLCGSVPSS--F-NL 389 (428)
Q Consensus 315 ~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~--~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~--~-~~ 389 (428)
...+..|+.|++.++.++.. ..+..+++|+.|.++.| ++...++.....+|+|++|.+++|++.. +... + .+
T Consensus 39 ~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~-lstl~pl~~l 115 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD-LSTLRPLKEL 115 (260)
T ss_pred cccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc-ccccchhhhh
Confidence 34556778888887776532 34566788999999999 6665666667777999999999998763 1111 1 67
Q ss_pred ccCceEEccCCcCCccCC---cccccCCCCCEEEC
Q 042919 390 SSLRRLYMHMNAFNGSIP---GALRRSLSLTVLDL 421 (428)
Q Consensus 390 ~~L~~L~l~~~~~~~~~~---~~~~~~~~L~~L~l 421 (428)
++|.+|++.+|..+.... ..|..+++|+.||-
T Consensus 116 ~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 116 ENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred cchhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 789999999998875332 34667788887764
No 70
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.20 E-value=0.00015 Score=60.81 Aligned_cols=83 Identities=28% Similarity=0.276 Sum_probs=38.7
Q ss_pred CCCEEeCCCcccccccccCCCCCcceeecccC--ccCccchhhhhcCCCCcEEEccCCccccc-CCcccCCCCCCcEEeC
Q 042919 298 SLSFLSLSDNHLQGEVVFPNSTNLCWLYLNNN--HFSGKIQDGLSKATSLLELDLSNNMLYGQ-IPPWFGNLSGLQFLDI 374 (428)
Q Consensus 298 ~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~--~~~~~~~~~l~~~~~L~~L~l~~~~i~~~-~~~~~~~~~~L~~L~L 374 (428)
.|+.+.+.++.++....+..+++|+.|.++.| ++..........+++|+++++++|+|... --..+..+++|..|++
T Consensus 44 ~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl 123 (260)
T KOG2739|consen 44 ELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDL 123 (260)
T ss_pred chhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhc
Confidence 44444444444444444455555555555555 33222222223345666666666655421 1122344455556666
Q ss_pred CCCcCC
Q 042919 375 SENQLC 380 (428)
Q Consensus 375 ~~~~~~ 380 (428)
..|..+
T Consensus 124 ~n~~~~ 129 (260)
T KOG2739|consen 124 FNCSVT 129 (260)
T ss_pred ccCCcc
Confidence 665544
No 71
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.61 E-value=0.00018 Score=68.00 Aligned_cols=187 Identities=24% Similarity=0.159 Sum_probs=89.0
Q ss_pred ccEEEccCCcCCCCCchhhhhcCCCCCEEEecCCccCCcccCCCCCCCccEEecCCCccccCCCchhhhcC----CCCcE
Q 042919 177 LRFIDLSHNKLQGIFPSWLLQNNTKLDTLYLLNNSLSGNFQLPSSKHDLLRLDISHNKFSCQLPGNMGKIL----PELLS 252 (428)
Q Consensus 177 L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~----~~L~~ 252 (428)
+..+.+.+|.+.+.....+... ....++|+.|+++++.+.+.....+...+ ..+++
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~--------------------l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~ 148 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQA--------------------LKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQT 148 (478)
T ss_pred HHHhhhhhCccccchHHHHHHH--------------------hcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHH
Confidence 6677777777766554444322 22333444444444444322222222211 23445
Q ss_pred EEccCCCCCCC----CCccccCCCCCCEEECcCcccCCCCc---hhh----hcCCCCCCEEeCCCcccccccc------c
Q 042919 253 LNLSENGFEGR----IPSSMSEMKRLESLDLSSNNFSGELP---RQF----LSGCFSLSFLSLSDNHLQGEVV------F 315 (428)
Q Consensus 253 L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~~~~~~~~~---~~~----~~~~~~L~~L~l~~~~~~~~~~------~ 315 (428)
|++..|.++.. ....+...+.++.++++.|.+..... ... +.....+++|.+..|.++.... +
T Consensus 149 L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l 228 (478)
T KOG4308|consen 149 LELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVL 228 (478)
T ss_pred HHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHH
Confidence 55555555432 22334445666667776666531110 111 1123456666666665553222 3
Q ss_pred CCCCC-cceeecccCccCccch----hhhhcC-CCCcEEEccCCcccccC----CcccCCCCCCcEEeCCCCcCCcCC
Q 042919 316 PNSTN-LCWLYLNNNHFSGKIQ----DGLSKA-TSLLELDLSNNMLYGQI----PPWFGNLSGLQFLDISENQLCGSV 383 (428)
Q Consensus 316 ~~~~~-L~~L~l~~~~~~~~~~----~~l~~~-~~L~~L~l~~~~i~~~~----~~~~~~~~~L~~L~L~~~~~~~~~ 383 (428)
...+. +.+|++..|.+.+... ..+..+ +.+++++++.|.+++.. ...+..++.++.+.++.|++.+..
T Consensus 229 ~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~~ 306 (478)
T KOG4308|consen 229 ASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTDYG 306 (478)
T ss_pred hccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccccHH
Confidence 33444 5556666666554322 223333 45566666666665432 223444556666666666655433
No 72
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.41 E-value=0.00012 Score=69.18 Aligned_cols=179 Identities=25% Similarity=0.276 Sum_probs=83.6
Q ss_pred ccEEecCCCccccCCCchhhh---cCCCCcEEEccCCCCCCCCCc----cccCC-CCCCEEECcCcccCCCCchh---hh
Q 042919 225 LLRLDISHNKFSCQLPGNMGK---ILPELLSLNLSENGFEGRIPS----SMSEM-KRLESLDLSSNNFSGELPRQ---FL 293 (428)
Q Consensus 225 L~~L~l~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~~----~l~~~-~~L~~L~l~~~~~~~~~~~~---~~ 293 (428)
+..+.+.+|.+.......++. ..+.|+.|++++|.+.+.... .+... ..+++|++..|.+++..... .+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 556666666665443333322 234566667777666532221 12222 34555666666554332221 12
Q ss_pred cCCCCCCEEeCCCcccccccc------c----CCCCCcceeecccCccCccc----hhhhhcCCC-CcEEEccCCccccc
Q 042919 294 SGCFSLSFLSLSDNHLQGEVV------F----PNSTNLCWLYLNNNHFSGKI----QDGLSKATS-LLELDLSNNMLYGQ 358 (428)
Q Consensus 294 ~~~~~L~~L~l~~~~~~~~~~------~----~~~~~L~~L~l~~~~~~~~~----~~~l~~~~~-L~~L~l~~~~i~~~ 358 (428)
.....++.+++..|.+..... + ....++++|.+.+|.++... ...+...+. +..|++.+|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 224455555555555532211 1 13445556666665554221 122333333 44455555555432
Q ss_pred ----CCcccCCC-CCCcEEeCCCCcCCcCCCCcc-----ccccCceEEccCCcCC
Q 042919 359 ----IPPWFGNL-SGLQFLDISENQLCGSVPSSF-----NLSSLRRLYMHMNAFN 403 (428)
Q Consensus 359 ----~~~~~~~~-~~L~~L~L~~~~~~~~~~~~~-----~~~~L~~L~l~~~~~~ 403 (428)
..+.+..+ +.++.+++++|.+++.....+ .++.++.+.+++|++.
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 12233333 445556666665554444333 3455555555555554
No 73
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.38 E-value=0.001 Score=53.72 Aligned_cols=85 Identities=19% Similarity=0.141 Sum_probs=62.4
Q ss_pred CCcceeecccCccCccchhhhhcCCCCcEEEccCCc-ccccCCcccC-CCCCCcEEeCCCCc-CCcCCCCcc-ccccCce
Q 042919 319 TNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNM-LYGQIPPWFG-NLSGLQFLDISENQ-LCGSVPSSF-NLSSLRR 394 (428)
Q Consensus 319 ~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~-i~~~~~~~~~-~~~~L~~L~L~~~~-~~~~~~~~~-~~~~L~~ 394 (428)
..++.++-+++.+..+..+.+..+++++.|.+.+|. +.+.--+.++ -.++|+.|+|++|+ ||+.....+ .+++|+.
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 357788888888888888888889999999998885 3322111122 34789999999995 666655555 7899999
Q ss_pred EEccCCcCC
Q 042919 395 LYMHMNAFN 403 (428)
Q Consensus 395 L~l~~~~~~ 403 (428)
|.+.+=+..
T Consensus 181 L~l~~l~~v 189 (221)
T KOG3864|consen 181 LHLYDLPYV 189 (221)
T ss_pred HHhcCchhh
Confidence 999876544
No 74
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.29 E-value=0.0019 Score=52.17 Aligned_cols=81 Identities=21% Similarity=0.187 Sum_probs=60.2
Q ss_pred CCCEEeCCCcccccccc--cCCCCCcceeecccCcc-Cccchhhhhc-CCCCcEEEccCC-cccccCCcccCCCCCCcEE
Q 042919 298 SLSFLSLSDNHLQGEVV--FPNSTNLCWLYLNNNHF-SGKIQDGLSK-ATSLLELDLSNN-MLYGQIPPWFGNLSGLQFL 372 (428)
Q Consensus 298 ~L~~L~l~~~~~~~~~~--~~~~~~L~~L~l~~~~~-~~~~~~~l~~-~~~L~~L~l~~~-~i~~~~~~~~~~~~~L~~L 372 (428)
.++.++-+++.|...+. +..++.++.|.+.+|.- .+...+.+++ .++|+.|+|++| .||+....++..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 56777778877765544 78888999999988853 3333333433 588999999988 6887777888889999999
Q ss_pred eCCCCc
Q 042919 373 DISENQ 378 (428)
Q Consensus 373 ~L~~~~ 378 (428)
.+.+=+
T Consensus 182 ~l~~l~ 187 (221)
T KOG3864|consen 182 HLYDLP 187 (221)
T ss_pred HhcCch
Confidence 887754
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.18 E-value=0.0085 Score=29.74 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=13.2
Q ss_pred cCceEEccCCcCCccCCccccc
Q 042919 391 SLRRLYMHMNAFNGSIPGALRR 412 (428)
Q Consensus 391 ~L~~L~l~~~~~~~~~~~~~~~ 412 (428)
+|+.|++++|+++ .+|..|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 4667777777776 55555554
No 76
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.20 E-value=0.039 Score=27.33 Aligned_cols=17 Identities=35% Similarity=0.557 Sum_probs=10.0
Q ss_pred ccEEEcCCCCCccchhH
Q 042919 154 LKALNLRNCSLQALPSI 170 (428)
Q Consensus 154 L~~L~l~~~~~~~l~~~ 170 (428)
|++|++++|+++.+|..
T Consensus 2 L~~Ldls~n~l~~ip~~ 18 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS 18 (22)
T ss_dssp ESEEEETSSEESEEGTT
T ss_pred ccEEECCCCcCEeCChh
Confidence 55666666665555554
No 77
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.54 E-value=0.095 Score=24.01 Aligned_cols=15 Identities=47% Similarity=0.795 Sum_probs=6.2
Q ss_pred ccEEEcCCCCCccch
Q 042919 154 LKALNLRNCSLQALP 168 (428)
Q Consensus 154 L~~L~l~~~~~~~l~ 168 (428)
|++|++++|++.++|
T Consensus 3 L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 3 LRTLDLSNNRLTSLP 17 (17)
T ss_dssp -SEEEETSS--SSE-
T ss_pred cCEEECCCCCCCCCc
Confidence 555566555555443
No 78
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=91.06 E-value=0.074 Score=26.92 Aligned_cols=20 Identities=30% Similarity=0.275 Sum_probs=9.4
Q ss_pred CCcceeecccCccCccchhh
Q 042919 319 TNLCWLYLNNNHFSGKIQDG 338 (428)
Q Consensus 319 ~~L~~L~l~~~~~~~~~~~~ 338 (428)
++|++|++++|.+++.....
T Consensus 2 ~~L~~L~l~~n~i~~~g~~~ 21 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGASA 21 (24)
T ss_dssp TT-SEEE-TSSBEHHHHHHH
T ss_pred CCCCEEEccCCcCCHHHHHH
Confidence 45556666666555444433
No 79
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=87.65 E-value=0.018 Score=47.83 Aligned_cols=83 Identities=24% Similarity=0.265 Sum_probs=39.5
Q ss_pred cCCCCcEEEccCCcccccCCcccCCCCCCcEEeCCCCcCCcCCCCcc-ccccCceEEccCCcCCccCCcccccCCCCCEE
Q 042919 341 KATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDISENQLCGSVPSSF-NLSSLRRLYMHMNAFNGSIPGALRRSLSLTVL 419 (428)
Q Consensus 341 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 419 (428)
.+...+.||++.+++. ..-.-|+-++.|.+|+++.|.+. ..+..+ +...++.++..+|... -.|..+++.|+++++
T Consensus 40 ~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKN 116 (326)
T ss_pred ccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchh
Confidence 3344444555444432 11222333344555555555443 233333 4444555555555554 555555566666666
Q ss_pred ECCCCcc
Q 042919 420 DLRDNEF 426 (428)
Q Consensus 420 ~l~~~~~ 426 (428)
+..++++
T Consensus 117 e~k~~~~ 123 (326)
T KOG0473|consen 117 EQKKTEF 123 (326)
T ss_pred hhccCcc
Confidence 5555554
No 80
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=87.00 E-value=0.53 Score=24.22 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=5.9
Q ss_pred cCceEEccCCcCC
Q 042919 391 SLRRLYMHMNAFN 403 (428)
Q Consensus 391 ~L~~L~l~~~~~~ 403 (428)
+|++|++++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=87.00 E-value=0.53 Score=24.22 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=5.9
Q ss_pred cCceEEccCCcCC
Q 042919 391 SLRRLYMHMNAFN 403 (428)
Q Consensus 391 ~L~~L~l~~~~~~ 403 (428)
+|++|++++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 82
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=78.55 E-value=1.5 Score=22.51 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=11.4
Q ss_pred CCCCCEEECCCCc-cC
Q 042919 413 SLSLTVLDLRDNE-FS 427 (428)
Q Consensus 413 ~~~L~~L~l~~~~-~~ 427 (428)
|++|+.|++++|+ ||
T Consensus 1 c~~L~~L~l~~C~~it 16 (26)
T smart00367 1 CPNLRELDLSGCTNIT 16 (26)
T ss_pred CCCCCEeCCCCCCCcC
Confidence 5788888888886 44
No 83
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=76.70 E-value=2.5 Score=21.85 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=6.9
Q ss_pred CCCCEEECCCCcc
Q 042919 414 LSLTVLDLRDNEF 426 (428)
Q Consensus 414 ~~L~~L~l~~~~~ 426 (428)
.+|+.|++++|+|
T Consensus 2 ~~L~~L~L~~NkI 14 (26)
T smart00365 2 TNLEELDLSQNKI 14 (26)
T ss_pred CccCEEECCCCcc
Confidence 3455555555554
No 84
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=75.17 E-value=2 Score=22.61 Aligned_cols=20 Identities=25% Similarity=0.202 Sum_probs=11.1
Q ss_pred CCcceeecccCccCccchhh
Q 042919 319 TNLCWLYLNNNHFSGKIQDG 338 (428)
Q Consensus 319 ~~L~~L~l~~~~~~~~~~~~ 338 (428)
++|++|+|++|.+.+.....
T Consensus 2 ~~L~~LdL~~N~i~~~G~~~ 21 (28)
T smart00368 2 PSLRELDLSNNKLGDEGARA 21 (28)
T ss_pred CccCEEECCCCCCCHHHHHH
Confidence 35666666666665444333
No 85
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=71.47 E-value=0.17 Score=42.22 Aligned_cols=82 Identities=17% Similarity=0.099 Sum_probs=47.9
Q ss_pred CCCCEEeCCCcccccccc-cCCCCCcceeecccCccCccchhhhhcCCCCcEEEccCCcccccCCcccCCCCCCcEEeCC
Q 042919 297 FSLSFLSLSDNHLQGEVV-FPNSTNLCWLYLNNNHFSGKIQDGLSKATSLLELDLSNNMLYGQIPPWFGNLSGLQFLDIS 375 (428)
Q Consensus 297 ~~L~~L~l~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~ 375 (428)
...+.|+++.+....... +..++.+..|+++.+.+. ..+..+.+...+..+++.+|... ..|.++...|+++++++.
T Consensus 42 kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~k 119 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQK 119 (326)
T ss_pred ceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhhc
Confidence 344444444444333222 344455556666655554 34555555666666666666665 667777777888888777
Q ss_pred CCcCC
Q 042919 376 ENQLC 380 (428)
Q Consensus 376 ~~~~~ 380 (428)
++.+.
T Consensus 120 ~~~~~ 124 (326)
T KOG0473|consen 120 KTEFF 124 (326)
T ss_pred cCcch
Confidence 77654
No 86
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=69.91 E-value=3 Score=39.77 Aligned_cols=66 Identities=30% Similarity=0.355 Sum_probs=36.6
Q ss_pred ccCCCCcEEeCCCCccCCccccccc-cCCCCCcEEEccCCcccc-ccCCCCCCCcCCccEEEcCCCCC
Q 042919 99 ANIKSLEYLSLDDNNFEGLFSFNSL-KNHSKLQVFKLSNSLVKI-ETEEFPGLPEYQLKALNLRNCSL 164 (428)
Q Consensus 99 ~~l~~L~~L~l~~~~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~ 164 (428)
.+.+.+..+.+++|++..+.....+ ...|+|+.|+|++|.... ............|++|-+.+|.+
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPl 282 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPL 282 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcc
Confidence 4567788888888877665443333 356777777777762211 11122222222366666666655
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=69.85 E-value=3.5 Score=21.28 Aligned_cols=18 Identities=33% Similarity=0.545 Sum_probs=11.3
Q ss_pred ccCceEEccCCcCCccCCc
Q 042919 390 SSLRRLYMHMNAFNGSIPG 408 (428)
Q Consensus 390 ~~L~~L~l~~~~~~~~~~~ 408 (428)
++|+.|++++|+++ .+|+
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 45667777777666 5554
No 88
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=64.49 E-value=4.1 Score=38.88 Aligned_cols=12 Identities=42% Similarity=0.672 Sum_probs=5.6
Q ss_pred CcEEeCCCCcCC
Q 042919 369 LQFLDISENQLC 380 (428)
Q Consensus 369 L~~L~L~~~~~~ 380 (428)
|++|-+.||++.
T Consensus 272 Leel~l~GNPlc 283 (585)
T KOG3763|consen 272 LEELVLEGNPLC 283 (585)
T ss_pred HHHeeecCCccc
Confidence 444444444443
No 89
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=61.25 E-value=53 Score=31.18 Aligned_cols=105 Identities=18% Similarity=0.113 Sum_probs=51.9
Q ss_pred CcceeecccCccCccchh--hhhcCCCCcEEEccCCccccc-------CCcccC--CCCCCcEEeCCCCcCCcCCCCcc-
Q 042919 320 NLCWLYLNNNHFSGKIQD--GLSKATSLLELDLSNNMLYGQ-------IPPWFG--NLSGLQFLDISENQLCGSVPSSF- 387 (428)
Q Consensus 320 ~L~~L~l~~~~~~~~~~~--~l~~~~~L~~L~l~~~~i~~~-------~~~~~~--~~~~L~~L~L~~~~~~~~~~~~~- 387 (428)
.++++....+...+.... ....-++.+.+++....-... .+.... ..--+..+.++.|+.........
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 477777777766544332 234456666776654422100 000000 01235556666665543322222
Q ss_pred ---ccccCceEEccCCcCCc----cCCcccccCCCCCEEECCCC
Q 042919 388 ---NLSSLRRLYMHMNAFNG----SIPGALRRSLSLTVLDLRDN 424 (428)
Q Consensus 388 ---~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~ 424 (428)
.-+.+..|+++||.+.. .+|.....-.+++.+..+.|
T Consensus 435 ~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n 478 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLN 478 (553)
T ss_pred hhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCC
Confidence 34566777777776642 34455544455555555554
Done!