Query 042924
Match_columns 355
No_of_seqs 386 out of 4104
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 19:17:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.7E-32 6E-37 227.0 16.8 157 24-191 6-162 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 6E-33 2E-37 247.3 12.3 161 5-173 69-229 (269)
3 3hra_A Ankyrin repeat family p 100.0 6.9E-32 2.4E-36 229.2 17.5 178 2-188 19-201 (201)
4 3aji_A 26S proteasome non-ATPa 100.0 4.1E-31 1.4E-35 229.4 20.3 181 2-193 20-200 (231)
5 1oy3_D Transcription factor in 100.0 2.9E-31 9.9E-36 237.0 19.3 183 2-194 23-254 (282)
6 2rfa_A Transient receptor pote 100.0 1.5E-31 5.1E-36 232.5 16.1 180 2-191 17-223 (232)
7 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-31 6.4E-36 235.3 16.8 182 2-193 37-218 (253)
8 2rfm_A Putative ankyrin repeat 100.0 1.7E-31 5.8E-36 225.6 15.7 166 11-187 24-189 (192)
9 4gpm_A Engineered protein OR26 100.0 3.6E-31 1.2E-35 219.0 16.5 148 2-158 18-165 (169)
10 2f8y_A Notch homolog 1, transl 100.0 1.4E-30 4.7E-35 224.8 20.2 178 5-192 8-185 (223)
11 2dzn_A Probable 26S proteasome 100.0 1.5E-30 5.2E-35 225.2 20.1 182 2-193 16-203 (228)
12 3aji_A 26S proteasome non-ATPa 100.0 6.6E-31 2.3E-35 228.1 17.3 174 3-188 55-228 (231)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 6.6E-31 2.3E-35 231.8 17.2 176 3-189 72-247 (253)
14 2f8y_A Notch homolog 1, transl 100.0 5E-31 1.7E-35 227.6 14.1 180 2-192 39-218 (223)
15 1k1a_A B-cell lymphoma 3-encod 100.0 6.2E-30 2.1E-34 223.2 20.0 181 2-193 23-211 (241)
16 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-30 4.4E-35 227.3 15.1 170 13-192 36-211 (236)
17 3b7b_A Euchromatic histone-lys 100.0 1.4E-29 4.8E-34 220.6 20.8 180 3-193 26-205 (237)
18 3utm_A Tankyrase-1; tankyrase, 100.0 5.2E-30 1.8E-34 235.7 18.8 185 2-193 38-308 (351)
19 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-29 3.6E-34 225.2 19.0 178 2-193 17-194 (261)
20 3v31_A Ankyrin repeat family A 100.0 8E-30 2.7E-34 210.3 15.5 156 21-187 2-157 (167)
21 2etb_A Transient receptor pote 100.0 3.1E-30 1.1E-34 227.7 12.5 176 7-189 24-245 (256)
22 3twr_A Tankyrase-2; ankyrin re 100.0 4.9E-30 1.7E-34 211.1 12.9 160 18-188 4-163 (165)
23 4hbd_A KN motif and ankyrin re 100.0 6.2E-30 2.1E-34 228.7 14.5 164 14-187 103-272 (276)
24 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-29 5.2E-34 209.2 15.7 162 16-188 8-169 (169)
25 3b7b_A Euchromatic histone-lys 100.0 4.4E-29 1.5E-33 217.4 19.4 163 4-173 59-221 (237)
26 1s70_B 130 kDa myosin-binding 100.0 1.4E-29 4.6E-34 228.4 16.5 183 2-192 54-259 (299)
27 4b93_B Ankyrin repeat domain-c 100.0 9.7E-30 3.3E-34 226.5 15.1 181 2-193 25-213 (269)
28 2xai_A ASB-9, ankyrin repeat a 100.0 2.2E-29 7.6E-34 223.1 17.3 173 3-191 51-223 (261)
29 2dzn_A Probable 26S proteasome 100.0 1.5E-29 5.3E-34 218.9 15.7 163 2-172 50-218 (228)
30 3v30_A DNA-binding protein rfx 100.0 1.8E-29 6.3E-34 209.1 15.4 158 22-189 2-159 (172)
31 3v30_A DNA-binding protein rfx 100.0 1.4E-29 4.7E-34 209.9 14.5 156 2-165 16-171 (172)
32 1k1a_A B-cell lymphoma 3-encod 100.0 8E-30 2.7E-34 222.4 13.8 172 4-186 61-237 (241)
33 3f6q_A Integrin-linked protein 100.0 1.5E-29 5.2E-34 211.2 14.8 165 19-193 2-166 (179)
34 3ljn_A Hypothetical protein; a 100.0 2.7E-29 9.1E-34 233.1 18.0 176 2-188 34-267 (364)
35 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.7E-29 5.8E-34 207.1 14.4 159 20-190 3-162 (162)
36 3d9h_A CDNA FLJ77766, highly s 100.0 6.3E-29 2.2E-33 223.1 19.4 176 3-192 74-249 (285)
37 1sw6_A Regulatory protein SWI6 100.0 3.8E-30 1.3E-34 235.6 11.7 166 3-171 111-325 (327)
38 1oy3_D Transcription factor in 100.0 3.6E-29 1.2E-33 223.3 16.2 162 3-172 60-268 (282)
39 2pnn_A Transient receptor pote 100.0 9.2E-30 3.2E-34 226.9 12.2 185 3-193 28-262 (273)
40 2rfa_A Transient receptor pote 100.0 1E-28 3.5E-33 214.5 17.7 165 21-192 2-185 (232)
41 1awc_B Protein (GA binding pro 100.0 4.5E-29 1.6E-33 202.9 14.3 151 22-184 2-152 (153)
42 3jxi_A Vanilloid receptor-rela 100.0 7.4E-30 2.5E-34 225.7 9.7 176 10-191 30-251 (260)
43 1wdy_A 2-5A-dependent ribonucl 100.0 3.4E-28 1.2E-32 216.9 20.2 180 3-192 54-247 (285)
44 3d9h_A CDNA FLJ77766, highly s 100.0 1.6E-28 5.5E-33 220.5 17.0 169 4-187 107-275 (285)
45 3kea_A K1L; tropism, ANK repea 100.0 8.9E-29 3.1E-33 222.2 13.9 156 3-171 14-170 (285)
46 1n11_A Ankyrin; clathrin, BAND 100.0 5.6E-28 1.9E-32 229.6 20.0 173 10-193 200-372 (437)
47 1n11_A Ankyrin; clathrin, BAND 100.0 4.3E-28 1.5E-32 230.4 19.2 171 5-186 228-398 (437)
48 2fo1_E LIN-12 protein; beta-ba 100.0 2.9E-28 9.8E-33 227.2 17.1 175 8-193 152-341 (373)
49 3eu9_A Huntingtin-interacting 100.0 8.7E-28 3E-32 209.0 18.9 182 2-193 23-205 (240)
50 3eu9_A Huntingtin-interacting 100.0 6E-28 2E-32 210.0 17.7 179 2-191 56-236 (240)
51 3kea_A K1L; tropism, ANK repea 100.0 1.5E-28 5E-33 220.7 14.2 177 2-194 45-224 (285)
52 1ikn_D Protein (I-kappa-B-alph 100.0 8.6E-29 2.9E-33 215.7 11.5 172 16-193 2-179 (236)
53 3utm_A Tankyrase-1; tankyrase, 100.0 8.9E-28 3E-32 220.8 18.7 170 3-187 73-331 (351)
54 1wdy_A 2-5A-dependent ribonucl 100.0 2.6E-27 9E-32 211.1 21.0 183 2-193 19-214 (285)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.5E-28 1.5E-32 197.4 14.4 153 22-186 2-154 (156)
56 1bi7_B P16INK4A, MTS1, multipl 100.0 2.1E-28 7.1E-33 199.7 10.9 146 15-169 5-151 (156)
57 2fo1_E LIN-12 protein; beta-ba 100.0 7.1E-28 2.4E-32 224.5 15.9 177 4-189 181-370 (373)
58 3f6q_A Integrin-linked protein 100.0 4.4E-28 1.5E-32 202.3 12.7 153 2-162 19-171 (179)
59 3hra_A Ankyrin repeat family p 100.0 3.6E-27 1.2E-31 200.0 17.4 169 19-193 2-173 (201)
60 1s70_B 130 kDa myosin-binding 99.9 2.6E-27 8.9E-32 213.4 17.1 164 19-193 37-227 (299)
61 3ljn_A Hypothetical protein; a 99.9 7.9E-28 2.7E-32 223.2 13.7 170 12-191 10-237 (364)
62 1d9s_A Cyclin-dependent kinase 99.9 7E-28 2.4E-32 192.0 10.9 134 12-154 2-136 (136)
63 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.5E-27 1.9E-31 192.0 13.7 143 2-154 19-162 (162)
64 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.1E-26 7.1E-31 190.3 16.5 142 2-152 28-169 (169)
65 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-27 3.5E-32 209.6 8.8 161 19-189 2-163 (239)
66 3twr_A Tankyrase-2; ankyrin re 99.9 5E-27 1.7E-31 193.1 12.0 143 2-153 22-164 (165)
67 2etb_A Transient receptor pote 99.9 3.7E-27 1.3E-31 207.9 11.5 164 21-191 1-207 (256)
68 3v31_A Ankyrin repeat family A 99.9 2.1E-26 7.3E-31 189.7 14.6 146 2-156 17-162 (167)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.8E-26 9.5E-31 186.7 14.9 140 2-151 16-155 (156)
70 4g8k_A 2-5A-dependent ribonucl 99.9 6.7E-26 2.3E-30 208.0 18.5 176 8-193 111-301 (337)
71 2vge_A RELA-associated inhibit 99.9 2E-27 6.9E-32 206.5 6.3 159 4-170 1-164 (229)
72 1awc_B Protein (GA binding pro 99.9 9.6E-26 3.3E-30 183.1 15.7 137 2-148 16-152 (153)
73 2pnn_A Transient receptor pote 99.9 6.9E-26 2.4E-30 201.7 15.1 159 2-167 71-272 (273)
74 2rfm_A Putative ankyrin repeat 99.9 5.5E-26 1.9E-30 191.6 13.3 142 2-152 49-190 (192)
75 3t8k_A Uncharacterized protein 99.9 2E-26 6.9E-31 193.5 10.3 154 22-186 6-175 (186)
76 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-25 7.9E-30 174.1 13.5 126 21-154 1-126 (126)
77 4g8k_A 2-5A-dependent ribonucl 99.9 1.6E-24 5.3E-29 198.9 21.1 180 3-191 40-232 (337)
78 3jxi_A Vanilloid receptor-rela 99.9 1E-25 3.5E-30 199.0 11.8 167 19-191 2-211 (260)
79 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-25 5.4E-30 178.3 11.6 128 17-152 9-136 (136)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.3E-26 2.2E-30 198.2 8.7 159 4-172 21-191 (239)
81 2vge_A RELA-associated inhibit 99.9 8.8E-27 3E-31 202.4 1.9 160 2-173 35-199 (229)
82 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-25 4.8E-30 178.6 7.6 127 17-151 5-131 (137)
83 1d9s_A Cyclin-dependent kinase 99.9 6E-25 2.1E-29 174.9 10.9 129 50-189 6-135 (136)
84 1sw6_A Regulatory protein SWI6 99.9 9.2E-25 3.1E-29 199.8 12.2 160 24-193 99-311 (327)
85 3t8k_A Uncharacterized protein 99.9 2.1E-25 7.2E-30 187.3 6.8 148 3-160 21-185 (186)
86 4hbd_A KN motif and ankyrin re 99.9 2E-24 6.7E-29 192.9 12.8 144 2-152 125-273 (276)
87 3deo_A Signal recognition part 99.9 8.3E-25 2.8E-29 183.2 9.6 140 18-186 40-180 (183)
88 3ehr_A Osteoclast-stimulating 99.9 3.1E-25 1.1E-29 191.4 6.8 141 15-163 66-207 (222)
89 3c5r_A BARD-1, BRCA1-associate 99.9 9.2E-25 3.1E-29 173.9 7.8 126 51-186 5-130 (137)
90 3ui2_A Signal recognition part 99.9 3.5E-24 1.2E-28 187.8 10.7 141 18-187 41-182 (244)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 9.8E-24 3.4E-28 167.8 12.1 124 56-188 13-136 (136)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.3E-23 1.1E-27 161.7 13.5 125 56-189 1-125 (126)
93 3aaa_C Myotrophin, protein V-1 99.9 3E-23 1E-27 162.0 12.0 108 56-169 6-113 (123)
94 3aaa_C Myotrophin, protein V-1 99.9 3.5E-23 1.2E-27 161.6 11.4 113 18-137 3-115 (123)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.8E-23 9.6E-28 187.6 10.5 139 21-173 150-297 (301)
96 1bi7_B P16INK4A, MTS1, multipl 99.9 2.6E-23 8.7E-28 169.4 9.0 131 52-193 8-139 (156)
97 3deo_A Signal recognition part 99.9 2E-23 6.9E-28 174.7 5.3 135 29-171 7-152 (183)
98 2aja_A Ankyrin repeat family p 99.9 8.2E-24 2.8E-28 196.4 1.0 156 16-188 86-248 (376)
99 3ehr_A Osteoclast-stimulating 99.9 1.4E-22 4.6E-27 174.8 8.4 165 18-191 21-199 (222)
100 3jue_A Arfgap with coiled-coil 99.9 3.2E-22 1.1E-26 185.1 11.3 147 18-171 195-346 (368)
101 3lvq_E ARF-GAP with SH3 domain 99.9 5.7E-22 1.9E-26 191.4 13.3 139 21-167 131-278 (497)
102 3ui2_A Signal recognition part 99.9 4.1E-23 1.4E-27 181.0 3.0 140 20-171 13-153 (244)
103 1dcq_A PYK2-associated protein 99.9 7.4E-21 2.5E-25 169.8 16.5 170 17-194 61-267 (278)
104 2b0o_E UPLC1; arfgap, structur 99.8 1.8E-21 6.2E-26 175.7 10.2 124 3-140 166-298 (301)
105 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-21 6.4E-26 149.8 8.6 104 56-165 8-111 (115)
106 1dcq_A PYK2-associated protein 99.8 2.5E-21 8.6E-26 172.8 10.4 127 22-155 130-264 (278)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.8E-21 2E-25 141.3 10.2 88 22-112 2-89 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.8 3.1E-21 1.1E-25 148.5 8.2 109 17-132 4-112 (115)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.8E-21 3.3E-25 140.1 10.1 93 56-154 1-93 (93)
110 2aja_A Ankyrin repeat family p 99.8 1.4E-21 5E-26 181.3 1.2 144 2-160 106-256 (376)
111 3lvq_E ARF-GAP with SH3 domain 99.8 1.6E-19 5.6E-24 174.2 12.8 128 57-193 132-268 (497)
112 3jue_A Arfgap with coiled-coil 99.8 1.3E-19 4.6E-24 167.5 11.4 124 56-188 198-324 (368)
113 2zgd_A 3 repeat synthetic anky 99.8 1.2E-18 4E-23 133.1 8.8 96 12-110 14-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 2.3E-17 7.8E-22 125.9 9.0 91 51-148 19-109 (110)
115 4ev6_A Magnesium transport pro 83.6 4.9 0.00017 35.8 9.0 51 304-354 281-337 (339)
116 2iub_A CORA, divalent cation t 82.1 4.6 0.00016 36.4 8.2 51 303-353 304-360 (363)
117 4b19_A PEPA1; toxin, toxin apo 40.1 20 0.00069 19.2 2.0 22 333-354 7-28 (30)
118 1gp8_A Protein (scaffolding pr 28.7 38 0.0013 19.3 2.0 17 26-42 17-33 (40)
119 3mkq_B Coatomer subunit alpha; 23.4 1.8E+02 0.0062 22.9 6.0 107 23-152 9-116 (177)
120 2lx0_A Membrane fusion protein 23.1 84 0.0029 16.2 2.6 20 332-351 8-27 (32)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-32 Score=226.97 Aligned_cols=157 Identities=27% Similarity=0.260 Sum_probs=144.8
Q ss_pred hHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCC
Q 042924 24 TPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFR 103 (355)
Q Consensus 24 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 103 (355)
++|+.||+.|+.++|+.|+++|+++ +.++. .|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+++|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~-~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDS-DGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 4799999999999999999999998 88887 9999999999999999999999999998 8899999999999999999
Q ss_pred hhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHH
Q 042924 104 VEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKL 183 (355)
Q Consensus 104 ~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~ 183 (355)
.++++.|++ .|+++|.+|.+|+||||+|+..|+ .+++++|+++|++++.+|.+|+|||++|.... ..+++++
T Consensus 83 ~~~v~~Ll~----~gadvn~~d~~G~TpLh~A~~~g~-~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g---~~~iv~~ 154 (169)
T 4gpm_A 83 KEVVKLLIS----KGADVNAKDSDGRTPLHHAAENGH-KEVVKLLISKGADVNTSDSDGRTPLDLAREHG---NEEVVKL 154 (169)
T ss_dssp HHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHHHH
T ss_pred HHHHHHHHH----CcCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCccccCCCCCCHHHHHHHcC---CHHHHHH
Confidence 999999999 789999999999999999999996 89999999999999999999999999999765 5688999
Q ss_pred HHHcCCCC
Q 042924 184 SKDVGRGQ 191 (355)
Q Consensus 184 l~~~~~~~ 191 (355)
|.+.|+.-
T Consensus 155 Ll~~GA~i 162 (169)
T 4gpm_A 155 LEKQGGWL 162 (169)
T ss_dssp HHTC----
T ss_pred HHHCCCCc
Confidence 99988754
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-33 Score=247.27 Aligned_cols=161 Identities=25% Similarity=0.278 Sum_probs=147.7
Q ss_pred HHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccc
Q 042924 5 SKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECY 84 (355)
Q Consensus 5 ~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~ 84 (355)
.++|...+.++|.+|.+|+||||+||..|+.+++++|++.++++ +.++. .|.||+|.|+..++.++++.|++.++++
T Consensus 69 v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~- 145 (269)
T 4b93_B 69 LAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNA-DQAVPLHLACQQGHFQVVKCLLDSNAKP- 145 (269)
T ss_dssp ------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCS-
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCC-CCCCccccccccChHHHHHHHHHCCCCC-
Confidence 34556677889999999999999999999999999999999987 77777 9999999999999999999999999998
Q ss_pred cccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCc
Q 042924 85 ELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVS 164 (355)
Q Consensus 85 ~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~T 164 (355)
+.+|..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+ .+++++|+++|+|++.+|.+|+|
T Consensus 146 n~~d~~g~TpL~~A~~~g~~~~v~~Ll~----~gadvn~~~~~g~t~Lh~A~~~g~-~~~v~~Ll~~Gad~~~~d~~G~T 220 (269)
T 4b93_B 146 NKKDLSGNTPLIYACSGGHHELVALLLQ----HGASINASNNKGNTALHEAVIEKH-VFVVELLLLHGASVQVLNKRQRT 220 (269)
T ss_dssp CCCCTTCCCHHHHHHHTTCGGGHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTC-HHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHH----CCCCCCccccCCCcHHHHHHHcCC-HHHHHHHHHCCCCCCCcCCCCCC
Confidence 8899999999999999999999999999 789999999999999999999996 99999999999999999999999
Q ss_pred HHHHHhhCC
Q 042924 165 VRHIFNYGY 173 (355)
Q Consensus 165 pl~~a~~~~ 173 (355)
|||+|.++.
T Consensus 221 pL~~A~~~~ 229 (269)
T 4b93_B 221 AVDCAEQNS 229 (269)
T ss_dssp SGGGSCTTC
T ss_pred HHHHHHhCC
Confidence 999998643
No 3
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=6.9e-32 Score=229.24 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=160.8
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++++|...+.+++.+|.+|+||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~ 96 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNS-ISDSPYLYAGAQGRTEILAYMLKHAT 96 (201)
T ss_dssp HHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 56888999888789999999999999999999999999999999988 77887 89999999999999999999996666
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhh-hhhccCCCCCCcHHHHHHhcCCc----hHHHHHHhccCcccc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLAR-SLINEGDAKGNTPLHVLAAIRPN----EFDVDLVRKTQANYD 156 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~-~~~n~~d~~G~T~Lh~A~~~~~~----~~~~~lL~~~ga~~~ 156 (355)
...+..|..|+||||+|+.+++.++++.|++ .+ .+++.+|.+|+||||+|+..++. .+++++|+++|++++
T Consensus 97 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 97 PDLNKHNRYGGNALIPAAEKGHIDNVKLLLE----DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH----HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred cccccccCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 4458899999999999999999999999999 56 78999999999999999998842 788999999999999
Q ss_pred cccCCCCcHHHHHhhCCCchHHHHHHHHHHcC
Q 042924 157 AVNKQIVSVRHIFNYGYPELKEEIQKLSKDVG 188 (355)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~ 188 (355)
.+|.+|+||+|+|.... ..+++++|.+.|
T Consensus 173 ~~~~~g~t~l~~A~~~~---~~~~~~~Ll~~G 201 (201)
T 3hra_A 173 IKDNSGRTAMDYANQKG---YTEISKILAQYN 201 (201)
T ss_dssp CCCTTSCCHHHHHHHHT---CHHHHHHHHTCC
T ss_pred ccCCCCCCHHHHHHHcC---CHhHHHHHHhcC
Confidence 99999999999999665 457777777643
No 4
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=4.1e-31 Score=229.39 Aligned_cols=181 Identities=26% Similarity=0.262 Sum_probs=168.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.+++++...+...+.+|.+|.||||+|+..|+.+++++|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 20 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 97 (231)
T 3aji_A 20 DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDD-AGWSPLHIAASAGXDEIVKALLVKGA 97 (231)
T ss_dssp HHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCC-CCCCHHHHHHHcCHHHHHHHHHHcCC
Confidence 57889999999999999999999999999999999999999999887 77787 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
++ +.+|..|+||||+|+..++.++++.|++ .|.+++.+|..|+||||+|+..|+ .+++++|++.|++++.+|.+
T Consensus 98 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~ 171 (231)
T 3aji_A 98 HV-NAVNQNGCTPLHYAASKNRHEIAVMLLE----GGANPDAKDHYDATAMHRAAAKGN-LKMVHILLFYKASTNIQDTE 171 (231)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCSCCCCTT
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHhcCCCccccCCC
Confidence 98 8889999999999999999999999999 778999999999999999999995 89999999999999999999
Q ss_pred CCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 162 IVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|.||+|+|.... ..+++++|.+.|.++..
T Consensus 172 g~t~L~~A~~~~---~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 172 GNTPLHLACDEE---RVEEAKFLVTQGASIYI 200 (231)
T ss_dssp SCCHHHHHHHTT---CHHHHHHHHHTTCCSCC
T ss_pred CCCHHHHHHHCC---CHHHHHHHHHCCCCCCC
Confidence 999999999765 46788999998877653
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.9e-31 Score=236.96 Aligned_cols=183 Identities=23% Similarity=0.235 Sum_probs=162.6
Q ss_pred hHHHHHHHhccc--cccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhh
Q 042924 2 AALSKLLEIKKN--LIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISK 79 (355)
Q Consensus 2 ~~v~~lL~~~~~--~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 79 (355)
+.++.|+..+.. .++.+|..|+||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~ 100 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAER-GGHTALHLACRVRAHTCACVLLQP 100 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCT-TSCCHHHHHTTTTCHHHHHHHSSS
T ss_pred HHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCcchhHhhhcc
Confidence 456667765443 38999999999999999999999999999999988 78887 999999999999999999999998
Q ss_pred CCcc----------------------------------------------ccccccCCchHHHHHHhcCChhHHHHHHhc
Q 042924 80 NPEC----------------------------------------------YELVDNRGWNFLHYAVVSFRVEKLTNLLEN 113 (355)
Q Consensus 80 ~~~~----------------------------------------------~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~ 113 (355)
+++. .+.+|..|+||||+|+.+|+.++++.|++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~- 179 (282)
T 1oy3_D 101 RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD- 179 (282)
T ss_dssp CCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-
T ss_pred CCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH-
Confidence 7651 35678899999999999999999999999
Q ss_pred ChhhhhhhccCCCC-CCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 114 NPLARSLINEGDAK-GNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 114 ~~~~~~~~n~~d~~-G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
.|.+++.+|.. |+||||+|+..|+ .+++++|+++|++++.+|.+|+||||+|.... ..+++++|.+.|.++.
T Consensus 180 ---~g~~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 180 ---AGADLNKPEPTCGRTPLHLAVEAQA-ASVLELLLKAGADPTARMYGGRTPLGSALLRP---NPILARLLRAHGAPEP 252 (282)
T ss_dssp ---HTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS---CHHHHHHHHHTTCCCC
T ss_pred ---cCCCCCCCCCCCCcCHHHHHHHcCC-HHHHHHHHHcCCCCcccccCCCCHHHHHHHcC---CcHHHHHHHHcCCCcC
Confidence 78899999865 9999999999996 99999999999999999999999999999765 5689999999888775
Q ss_pred CC
Q 042924 193 SD 194 (355)
Q Consensus 193 ~~ 194 (355)
..
T Consensus 253 ~~ 254 (282)
T 1oy3_D 253 ED 254 (282)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.5e-31 Score=232.45 Aligned_cols=180 Identities=22% Similarity=0.187 Sum_probs=157.2
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcc----cccccCCCchHHHHHHhcCCHHHHHHHh
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSAS----NIADKDRKMTALHLAAGKGDARIVEAII 77 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll 77 (355)
+.++.|++..+.+++.+|.+|+||||+|+..|+.++++.|++.+++.. +.++. .|.||||+|+..|+.+++++|+
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll 95 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALHIAVINQNVNLVRALL 95 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHHHHHHcCCHHHHHHHH
Confidence 467788887788899999999999999999999999999999987753 33444 8999999999999999999999
Q ss_pred hhCCcccccccc-------------CCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHH
Q 042924 78 SKNPECYELVDN-------------RGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFD 144 (355)
Q Consensus 78 ~~~~~~~~~~d~-------------~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~ 144 (355)
+.++++ +.++. +|+||||+|+..|+.++++.|++ .|+++|.+|.+|+||||+|+..++ .++
T Consensus 96 ~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t~L~~A~~~~~-~~~ 169 (232)
T 2rfa_A 96 ARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE----HGADIRAQDSLGNTVLHILILQPN-KTF 169 (232)
T ss_dssp HTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHTCSC-HHH
T ss_pred hCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCC-hHH
Confidence 999887 55544 79999999999999999999999 788999999999999999999996 666
Q ss_pred H----HHHhccCccc------ccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 145 V----DLVRKTQANY------DAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 145 ~----~lL~~~ga~~------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
+ ++|++.|++. +.+|.+|+||+|+|.... ..+++++|.+.|..+
T Consensus 170 ~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g---~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 170 ACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG---NIVMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT---CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC---CHHHHHHHHhcCccc
Confidence 6 9999999988 689999999999999665 457788877755433
No 7
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=1.9e-31 Score=235.33 Aligned_cols=182 Identities=24% Similarity=0.196 Sum_probs=154.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|+..+++..+..|.+|+||||+|+..|+.++++.|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 37 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 37 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDN-MGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp ---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45677777777766777999999999999999999999999999987 77887 99999999999999999999999998
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
...+.+|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|+++|++++.+|.+
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~ 189 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLIN----SHADVNAVDDLGKSALHWAAAVNN-VDAAVVLLKNGANKDMQNNR 189 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH----TTCCTTCBCTTSCBHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTT
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCC
Confidence 5558899999999999999999999999999 788999999999999999999996 89999999999999999999
Q ss_pred CCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 162 IVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|.||+|+|+... ..+++++|.+.|.++..
T Consensus 190 g~tpL~~A~~~~---~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 190 EETPLFLAAREG---SYETAKVLLDHFANRDI 218 (253)
T ss_dssp SCCHHHHHHHHT---CHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHCC---CHHHHHHHHHcCCCccc
Confidence 999999999665 56789999998877653
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.7e-31 Score=225.57 Aligned_cols=166 Identities=22% Similarity=0.184 Sum_probs=152.9
Q ss_pred ccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccC
Q 042924 11 KKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNR 90 (355)
Q Consensus 11 ~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 90 (355)
.+.++|.+|.+|+||||+|+..|+.++++.|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++++ +.+|..
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 100 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDI-EGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFS 100 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTT
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccc-cCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCC
Confidence 34567889999999999999999999999999999887 77777 8999999999999999999999999988 888999
Q ss_pred CchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHh
Q 042924 91 GWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFN 170 (355)
Q Consensus 91 g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~ 170 (355)
|+||||+|+..++.+++++|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|.||+++|.
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLE----HGANVNDRNLEGETPLIVASKYGR-SEIVKKLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH----TTCCSSCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999 788999999999999999999996 89999999999999999999999999999
Q ss_pred hCCCchHHHHHHHHHHc
Q 042924 171 YGYPELKEEIQKLSKDV 187 (355)
Q Consensus 171 ~~~~~~~~~i~~~l~~~ 187 (355)
... ..+++++|.+.
T Consensus 176 ~~~---~~~~v~~Ll~~ 189 (192)
T 2rfm_A 176 IFG---RQEVIKIFTEV 189 (192)
T ss_dssp HTT---CHHHHHHHHHH
T ss_pred HhC---cHHHHHHHHhc
Confidence 765 45677777664
No 9
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.6e-31 Score=219.03 Aligned_cols=148 Identities=28% Similarity=0.351 Sum_probs=132.3
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.|+.||+ .+.++|.+|.+|+||||+|+..|+.++++.|++.|+++ +.++. .|+||||+|+..|+.+++++|++.++
T Consensus 18 ~~v~~Ll~-~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~ga 94 (169)
T 4gpm_A 18 DRVKDLIE-NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDS-DGRTPLHHAAENGHKEVVKLLISKGA 94 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhcc-CCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 45566555 56779999999999999999999999999999999998 88887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAV 158 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~ 158 (355)
++ +.+|.+|+||||+|+++|+.++++.|++ .|++++.+|.+|+||||+|++.|+ .+++++|+++|++++..
T Consensus 95 dv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~g~-~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 95 DV-NAKDSDGRTPLHHAAENGHKEVVKLLIS----KGADVNTSDSDGRTPLDLAREHGN-EEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHTC-------
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCcCCC
Confidence 98 8899999999999999999999999999 789999999999999999999996 99999999999998643
No 10
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.4e-30 Score=224.84 Aligned_cols=178 Identities=24% Similarity=0.194 Sum_probs=122.6
Q ss_pred HHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccc
Q 042924 5 SKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECY 84 (355)
Q Consensus 5 ~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~ 84 (355)
+.|++.+.+..+..|.+|+||||+|+..|+.+++++|++++.++ +..+. .|.||||+|+..|+.+++++|++.++...
T Consensus 8 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 85 (223)
T 2f8y_A 8 SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDL 85 (223)
T ss_dssp ETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHBTTSCT
T ss_pred HHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 33444444433444677777777777777777777777777665 55665 67777777777777777777777766444
Q ss_pred cccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCc
Q 042924 85 ELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVS 164 (355)
Q Consensus 85 ~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~T 164 (355)
+..|..|+||||+|+..++.++++.|++ .+.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|.|
T Consensus 86 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 86 DARMHDGTTPLILAARLAVEGMLEDLIN----SHADVNAVDDLGKSALHWAAAVNN-VDAAVVLLKNGANKDMQNNREET 160 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCC
T ss_pred ccCCCCCCcHHHHHHHhCcHHHHHHHHH----cCCCCcCcCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCcC
Confidence 6667777777777777777777777777 566677777777777777777774 66777777777777777777777
Q ss_pred HHHHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 165 VRHIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 165 pl~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
|+|+|+... ..+++++|.+.|.++.
T Consensus 161 ~L~~A~~~~---~~~~v~~Ll~~ga~~~ 185 (223)
T 2f8y_A 161 PLFLAAREG---SYETAKVLLDHFANRD 185 (223)
T ss_dssp HHHHHHHHT---CHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCc
Confidence 777777544 3466666666665554
No 11
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=1.5e-30 Score=225.21 Aligned_cols=182 Identities=20% Similarity=0.226 Sum_probs=163.2
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccC--CCcccccccCCCchHHHHHHhcCCHHHHHHHhhh
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETD--QSASNIADKDRKMTALHLAAGKGDARIVEAIISK 79 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 79 (355)
+.++.|++.++...+.+|.+|+||||+|+..|+.++++.|++.+ .+.....+. .|.||||+|+..|+.+++++|++.
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~ 94 (228)
T 2dzn_A 16 FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-SGWTPFHIACSVGNLEVVKSLYDR 94 (228)
T ss_dssp HHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT-TSCCHHHHHHHHCCHHHHHHHHSS
T ss_pred HHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHhC
Confidence 57888999998888889999999999999999999999999998 444222555 899999999999999999999999
Q ss_pred C--CccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC-cccc
Q 042924 80 N--PECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ-ANYD 156 (355)
Q Consensus 80 ~--~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g-a~~~ 156 (355)
+ ++. +..|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|++.| ++++
T Consensus 95 g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~ 168 (228)
T 2dzn_A 95 PLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIE----NGASVRIKDKFNQIPLHRAASVGS-LKLIELLCGLGKSAVN 168 (228)
T ss_dssp SSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHTTTCCCSC
T ss_pred CCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHH----cCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHhcCccccc
Confidence 8 666 7889999999999999999999999999 788999999999999999999996 89999999999 9999
Q ss_pred cccCCCCcHHHHHhhCCCchHHHHHHHHH-HcCCCCCC
Q 042924 157 AVNKQIVSVRHIFNYGYPELKEEIQKLSK-DVGRGQYS 193 (355)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~-~~~~~~~~ 193 (355)
.+|.+|+||+|+|.... ..+++++|. +.|.++..
T Consensus 169 ~~d~~g~t~L~~A~~~~---~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 169 WQDKQGWTPLFHALAEG---HGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp CCCTTSCCHHHHHHHTT---CHHHHHHHHHHHCCCSCC
T ss_pred CcCCCCCCHHHHHHHcC---CHHHHHHHHHhcCCCCCc
Confidence 99999999999999765 457777777 77777654
No 12
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=6.6e-31 Score=228.11 Aligned_cols=174 Identities=22% Similarity=0.260 Sum_probs=158.8
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
.++.|+ +.+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++. .|.||||+|+..|+.+++++|++.+.+
T Consensus 55 ~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 131 (231)
T 3aji_A 55 IVEFLL-QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQ-NGCTPLHYAASKNRHEIAVMLLEGGAN 131 (231)
T ss_dssp HHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455555 456778999999999999999999999999999999987 77777 899999999999999999999999998
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
+ +.+|..|+||||+|+..|+.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|
T Consensus 132 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g 205 (231)
T 3aji_A 132 P-DAKDHYDATAMHRAAAKGNLKMVHILLF----YKASTNIQDTEGNTPLHLACDEER-VEEAKFLVTQGASIYIENKEE 205 (231)
T ss_dssp T-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCSCCCCTTS
T ss_pred C-CCcCCCCCcHHHHHHHcCCHHHHHHHHh----cCCCccccCCCCCCHHHHHHHCCC-HHHHHHHHHCCCCCCCCCCCC
Confidence 8 8889999999999999999999999999 788999999999999999999996 899999999999999999999
Q ss_pred CcHHHHHhhCCCchHHHHHHHHHHcC
Q 042924 163 VSVRHIFNYGYPELKEEIQKLSKDVG 188 (355)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~~ 188 (355)
+||+++|...+ ..++.++|.+.+
T Consensus 206 ~t~l~~A~~~~---~~~i~~lL~~~~ 228 (231)
T 3aji_A 206 KTPLQVAKGGL---GLILKRLAEGEE 228 (231)
T ss_dssp CCHHHHSCHHH---HHHHHHHHHHHH
T ss_pred CCHHHHHHhhH---HHHHHHHHcccc
Confidence 99999998654 677888887754
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=6.6e-31 Score=231.81 Aligned_cols=176 Identities=21% Similarity=0.201 Sum_probs=158.7
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
.++.| .+.+.+++.+|.+|+||||+|+..|+.+++++|++.++...+.++. .|.||||+|+..|+.+++++|++.+++
T Consensus 72 ~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 149 (253)
T 1yyh_A 72 AAKRL-LEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILAARLAVEGMLEDLINSHAD 149 (253)
T ss_dssp HHHHH-HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHHHHHHTCSSHHHHHHHTTCC
T ss_pred HHHHH-HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHHHHHcChHHHHHHHHHcCCC
Confidence 44444 4567778999999999999999999999999999998855588887 999999999999999999999999999
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
+ +.+|..|+||||+|+..|+.++++.|++ .|++++.+|.+|+||||+|+..|+ .+++++|+++|++++.+|..|
T Consensus 150 ~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 150 V-NAVDDLGKSALHWAAAVNNVDAAVVLLK----NGANKDMQNNREETPLFLAAREGS-YETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp T-TCBCTTSCBHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTC
T ss_pred C-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHCCC-HHHHHHHHHcCCCccccccCC
Confidence 8 8889999999999999999999999999 788999999999999999999996 899999999999999999999
Q ss_pred CcHHHHHhhCCCchHHHHHHHHHHcCC
Q 042924 163 VSVRHIFNYGYPELKEEIQKLSKDVGR 189 (355)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 189 (355)
+||+++|.... ..+|.++|.....
T Consensus 224 ~tpl~~A~~~g---~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 224 RLPRDIAQERM---HHDIVRLLDLEHH 247 (253)
T ss_dssp CCHHHHHHHTT---CHHHHHHHHC---
T ss_pred CCHHHHHHHcC---CHHHHHHHHHHhh
Confidence 99999999776 5678888876443
No 14
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=5e-31 Score=227.60 Aligned_cols=180 Identities=22% Similarity=0.226 Sum_probs=163.7
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++.++...+..+. .|.||||+|+..|+.+++++|++.++
T Consensus 39 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~ 116 (223)
T 2f8y_A 39 DAAKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILAARLAVEGMLEDLINSHA 116 (223)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHHHHhCcHHHHHHHHHcCC
Confidence 34555554 56778999999999999999999999999999998855577787 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
++ +.+|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|..
T Consensus 117 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~ 190 (223)
T 2f8y_A 117 DV-NAVDDLGKSALHWAAAVNNVDAAVVLLK----NGANKDMQNNREETPLFLAAREGS-YETAKVLLDHFANRDITDHM 190 (223)
T ss_dssp CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTT
T ss_pred CC-cCcCCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCcCHHHHHHHcCC-HHHHHHHHHcCCCCcccccc
Confidence 98 8889999999999999999999999999 788999999999999999999996 89999999999999999999
Q ss_pred CCcHHHHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 162 IVSVRHIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
|.||+++|.... ..+++++|.+.|....
T Consensus 191 g~t~l~~A~~~~---~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 191 DRLPRDIAQERM---HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CCCHHHHHHHTT---CHHHHHHHHHTTCSSC
T ss_pred CCCHHHHHHHhc---chHHHHHHHHcCCCcc
Confidence 999999999766 5689999999877654
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=6.2e-30 Score=223.17 Aligned_cols=181 Identities=22% Similarity=0.167 Sum_probs=163.4
Q ss_pred hHHHHHHH---hccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhh
Q 042924 2 AALSKLLE---IKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIIS 78 (355)
Q Consensus 2 ~~v~~lL~---~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~ 78 (355)
+.++.|++ ..+..++.+|.+|.||||+|+..|+.+++++|++.|.++ +..+. .|.||||+|+..|+.+++++|++
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~ 100 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDR-HGQTAAHLACEHRSPTCLRALLD 100 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHHHH
Confidence 45666666 477889999999999999999999999999999999887 77777 99999999999999999999999
Q ss_pred hCC----ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCC-CCCCcHHHHHHhcCCchHHHHHHhccCc
Q 042924 79 KNP----ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGD-AKGNTPLHVLAAIRPNEFDVDLVRKTQA 153 (355)
Q Consensus 79 ~~~----~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~ga 153 (355)
.++ +. +..|..|+||||+|+..++.++++.|++ .|.+++.+| ..|+||||+|+..++ .+++++|+++|+
T Consensus 101 ~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~ 174 (241)
T 1k1a_A 101 SAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLE----RGADIDAVDIKSGRSPLIHAVENNS-LSMVQLLLQHGA 174 (241)
T ss_dssp HSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHHHTTC
T ss_pred cCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHH----cCCCcccccccCCCcHHHHHHHcCC-HHHHHHHHHcCC
Confidence 987 44 7789999999999999999999999999 778899998 889999999999995 899999999999
Q ss_pred ccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 154 NYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
+++.+|.+|.||+|+|.... ..+++++|.+.|.++..
T Consensus 175 ~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 175 NVNAQMYSGSSALHSASGRG---LLPLVRTLVRSGADSSL 211 (241)
T ss_dssp CTTCBCTTSCBHHHHHHHHT---CHHHHHHHHHTTCCTTC
T ss_pred CCCCcCCCCCCHHHHHHHcC---CHHHHHHHHhcCCCCCC
Confidence 99999999999999999665 46788888888877643
No 16
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.3e-30 Score=227.31 Aligned_cols=170 Identities=20% Similarity=0.183 Sum_probs=157.0
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc-----ccccc
Q 042924 13 NLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE-----CYELV 87 (355)
Q Consensus 13 ~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~-----~~~~~ 87 (355)
.+++.+|..|+||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.+++ ..+..
T Consensus 36 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (236)
T 1ikn_D 36 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDF-RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT 113 (236)
T ss_dssp CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCT-TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCC
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhcc
Confidence 368999999999999999999999999999999987 78887 999999999999999999999999864 24778
Q ss_pred ccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCC-CCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHH
Q 042924 88 DNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDA-KGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVR 166 (355)
Q Consensus 88 d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl 166 (355)
|..|+||||+|+.+|+.+++++|++ .|.+++.+|. +|+||||+|+..|+ .+++++|+++|++++.+|..|+||+
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVS----LGADVNAQEPCNGRTALHLAVDLQN-PDLVSLLLKCGADVNRVTYQGYSPY 188 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHH----HTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHHTTTCCSCCCCTTCCCGG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCcccCCCCCHH
Confidence 8899999999999999999999999 7899999998 99999999999996 9999999999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 167 HIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 167 ~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
++|.... ..+++++|.+.|..+.
T Consensus 189 ~~A~~~~---~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 189 QLTWGRP---STRIQQQLGQLTLENL 211 (236)
T ss_dssp GGCTTSS---CHHHHHHHHTTSCGGG
T ss_pred HHHHccC---chHHHHHHHHcchhhh
Confidence 9999765 5689999999888665
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.4e-29 Score=220.59 Aligned_cols=180 Identities=23% Similarity=0.167 Sum_probs=161.9
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
.++.|+ +.+..++..|.+|.||||+|+..|+.+++++|+++|.++ +.++. .|.||||+|+..|+.+++++|++.++.
T Consensus 26 ~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 102 (237)
T 3b7b_A 26 ICHMLV-QAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDA-EGSTCLHLAAKKGHYEVVQYLLSNGQM 102 (237)
T ss_dssp HHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHH-HcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCC
Confidence 455555 456778999999999999999999999999999999887 77776 899999999999999999999999965
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
..+..|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|++.|++++.+|..|
T Consensus 103 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~g 177 (237)
T 3b7b_A 103 DVNCQDDGGWTPMIWATEYKHVDLVKLLLS----KGSDINIRDNEENICLHWAAFSGC-VDIAEILLAAKCDLHAVNIHG 177 (237)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHCC-HHHHHHHHTTTCCTTCCCTTC
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCccCCCCCCHHHHHHHCCC-HHHHHHHHHcCCCCCCcCCCC
Confidence 558889999999999999999999999999 778999999999999999999995 899999999999999999999
Q ss_pred CcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 163 VSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
.||+|+|.... ..+++++|.+.|.++..
T Consensus 178 ~t~L~~A~~~~---~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 178 DSPLHIAAREN---RYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp CCHHHHHHHTT---CHHHHHHHHTTTCCTTC
T ss_pred CCHHHHHHHhC---CHhHHHHHHHcCCCCCc
Confidence 99999999765 56788889888877643
No 18
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=5.2e-30 Score=235.71 Aligned_cols=185 Identities=24% Similarity=0.221 Sum_probs=154.0
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++++|...+.+++.+|..|.||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 38 ~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~g~ 115 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDK-GGLVPLHNACSYGHYEVTELLLKHGA 115 (351)
T ss_dssp HHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-CCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence 45777888778888888888999999999999999999999888877 77776 88899999999999999999998888
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChh---------------------------------------------
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPL--------------------------------------------- 116 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~--------------------------------------------- 116 (355)
++ +..|..|+||||+|+.+|+.++++.|++....
T Consensus 116 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
T 3utm_A 116 CV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKV 194 (351)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHH
Confidence 87 77788888899988888888888888764210
Q ss_pred -----------------------------------------hhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCccc
Q 042924 117 -----------------------------------------ARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANY 155 (355)
Q Consensus 117 -----------------------------------------~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~ 155 (355)
.|.++|.+|.+|+||||+|+..|+ .+++++|+++|+++
T Consensus 195 ~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~ 273 (351)
T 3utm_A 195 KKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH-NDVMEVLHKHGAKM 273 (351)
T ss_dssp HHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCT
T ss_pred HHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCC
Confidence 344577788899999999999995 88889999999999
Q ss_pred ccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 156 DAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 156 ~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
+.+|..|+||||+|.... ..+++++|.+.|.++..
T Consensus 274 n~~d~~g~t~L~~A~~~~---~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 274 NALDSLGQTALHRAALAG---HLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp TCCCTTSCCHHHHHHHHT---CHHHHHHHHHTTCCTTC
T ss_pred CCcCCCCCCHHHHHHHcC---cHHHHHHHHHcCCCCCC
Confidence 999999999999998655 56788888888877654
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=225.16 Aligned_cols=178 Identities=19% Similarity=0.150 Sum_probs=158.4
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+|.+|.||||+|+..|+.++++.|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 17 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 17 LSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTA-DWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp HHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 34555555 56678999999999999999999999999999999887 77887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
++ + .+.+|+||||+|+..|+.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|++.|++++. |..
T Consensus 94 ~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~-~~~ 165 (261)
T 2xai_A 94 SV-Q-PESDLASPIHEAARRGHVECVNSLIA----YGGNIDHKISHLGTPLYLACENQQ-RACVKKLLESGADVNQ-GKG 165 (261)
T ss_dssp CS-S-CSCTTCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCBTTTBCHHHHHHHTTC-HHHHHHHHHHTCCTTC-CBT
T ss_pred CC-C-CCCCCCCHHHHHHHcCcHHHHHHHHH----cCCCCCcCCCCCCCHHHHHHHhCC-HHHHHHHHHcCCCCCC-CCC
Confidence 87 4 35679999999999999999999999 788999999999999999999995 8999999999999995 899
Q ss_pred CCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 162 IVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|.||+|+|+... ..+++++|.+.|.++..
T Consensus 166 g~t~Lh~A~~~~---~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 166 QDSPLHAVARTA---SEELACLLMDFGADTQA 194 (261)
T ss_dssp TBCHHHHHHHHT---CHHHHHHHHHTTCCTTC
T ss_pred CCChHHHHHHcC---CHHHHHHHHHcCCCCCC
Confidence 999999999665 46788899888877653
No 20
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=8e-30 Score=210.30 Aligned_cols=156 Identities=18% Similarity=0.121 Sum_probs=143.6
Q ss_pred CCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHh
Q 042924 21 YGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVV 100 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 100 (355)
.|.||||.|+..|+.++++.|++.+.+. +.++. .|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 5899999999999999999999998876 78887 9999999999999999999999999988 8889999999999999
Q ss_pred cCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHH
Q 042924 101 SFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEI 180 (355)
Q Consensus 101 ~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i 180 (355)
.++.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|+||+++|.... ..++
T Consensus 79 ~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~---~~~~ 150 (167)
T 3v31_A 79 KGYTDIVKMLLD----CGVDVNEYDWNGGTPLLYAVHGNH-VKCVKMLLESGADPTIETDSGYNSMDLAVALG---YRSV 150 (167)
T ss_dssp HTCHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT---CHHH
T ss_pred cCCHHHHHHHHH----CCCCCCcCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC---cHHH
Confidence 999999999999 788999999999999999999996 89999999999999999999999999999654 3456
Q ss_pred HHHHHHc
Q 042924 181 QKLSKDV 187 (355)
Q Consensus 181 ~~~l~~~ 187 (355)
+++|.+.
T Consensus 151 ~~~L~~~ 157 (167)
T 3v31_A 151 QQVIESH 157 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666553
No 21
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.1e-30 Score=227.65 Aligned_cols=176 Identities=22% Similarity=0.165 Sum_probs=150.7
Q ss_pred HHHhccccccc----cCCCCChHHHHHHHc---CCHHHHHHhhccCCCcccc----------cccCCCchHHHHHHhcCC
Q 042924 7 LLEIKKNLIKE----TDQYGWTPIHYAAYY---GNYGTVNLLLETDQSASNI----------ADKDRKMTALHLAAGKGD 69 (355)
Q Consensus 7 lL~~~~~~~~~----~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~----------~~~~~g~tpLh~Aa~~g~ 69 (355)
.+...+.+++. +|.+|+||||+|+.. |+.+++++|++.+++.... ++. .|.||||+|+..|+
T Consensus 24 ~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~-~g~t~L~~A~~~g~ 102 (256)
T 2etb_A 24 YLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFY-QGHSALHIAIEKRS 102 (256)
T ss_dssp HHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTT-TTCCHHHHHHHTTC
T ss_pred HHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccc-cCCCHHHHHHHcCC
Confidence 33456677888 899999999999999 9999999999988765222 223 79999999999999
Q ss_pred HHHHHHHhhhCCccccccccC-------------CchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHH
Q 042924 70 ARIVEAIISKNPECYELVDNR-------------GWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLA 136 (355)
Q Consensus 70 ~~~v~~Ll~~~~~~~~~~d~~-------------g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~ 136 (355)
.+++++|++.++++ +.+|.. |+||||+|+.+|+.+++++|++... .|+++|.+|.+|+||||+|+
T Consensus 103 ~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~-~ga~~n~~d~~g~TpLh~A~ 180 (256)
T 2etb_A 103 LQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH-QPASLEATDSLGNTVLHALV 180 (256)
T ss_dssp HHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-cCCCcCccCCCCCCHHHHHH
Confidence 99999999999998 777775 9999999999999999999999321 35789999999999999999
Q ss_pred h--cCCchH-------HHHHHhccCccc-------ccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCC
Q 042924 137 A--IRPNEF-------DVDLVRKTQANY-------DAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGR 189 (355)
Q Consensus 137 ~--~~~~~~-------~~~lL~~~ga~~-------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 189 (355)
. .++ .+ ++++|+++|+++ +.+|.+|+||+|+|.... ..+++++|.+.|.
T Consensus 181 ~~~~~~-~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 181 MIADNS-PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG---KIEIFRHILQREF 245 (256)
T ss_dssp HHCCSC-HHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT---CHHHHHHHHHHHH
T ss_pred HcccCC-chhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhC---CHHHHHHHHhCCC
Confidence 9 554 66 899999999999 999999999999999765 5677787777543
No 22
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=4.9e-30 Score=211.14 Aligned_cols=160 Identities=23% Similarity=0.192 Sum_probs=144.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHH
Q 042924 18 TDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHY 97 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (355)
.|.+|.||||.|++.|+.++++.|++.+....+..+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccccc-CCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHH
Confidence 5788999999999999999999999976655466666 8999999999999999999999999998 8889999999999
Q ss_pred HHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchH
Q 042924 98 AVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELK 177 (355)
Q Consensus 98 A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~ 177 (355)
|+..++.+++++|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|+||+++|..+ .
T Consensus 82 A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~----~ 152 (165)
T 3twr_A 82 ACSYGHYEVAELLVK----HGAVVNVADLWKFTPLHEAAAKGK-YEICKLLLQHGADPTKKNRDGNTPLDLVKDG----D 152 (165)
T ss_dssp HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCTGGGSCTT----C
T ss_pred HHHcCcHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCChhHhHhcC----C
Confidence 999999999999999 788999999999999999999996 8999999999999999999999999998764 3
Q ss_pred HHHHHHHHHcC
Q 042924 178 EEIQKLSKDVG 188 (355)
Q Consensus 178 ~~i~~~l~~~~ 188 (355)
.+++++|.+.|
T Consensus 153 ~~i~~~L~~~g 163 (165)
T 3twr_A 153 TDIQDLLRGDA 163 (165)
T ss_dssp HHHHHHHHTC-
T ss_pred hHHHHHHhhcc
Confidence 47888888755
No 23
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=6.2e-30 Score=228.69 Aligned_cols=164 Identities=18% Similarity=0.188 Sum_probs=149.9
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHH-----hcCCHHHHHHHhhhCCccccccc
Q 042924 14 LIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAA-----GKGDARIVEAIISKNPECYELVD 88 (355)
Q Consensus 14 ~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa-----~~g~~~~v~~Ll~~~~~~~~~~d 88 (355)
.+|.+|.+|+||||+|+..|+.++++.|++.|+...+..+. .|.||||+|+ ..++.++++.|++.+.+. +..|
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~ 180 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNR-AGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKAS 180 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCT-TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCC-CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccC
Confidence 47899999999999999999999999999999844488887 9999999999 668999999999999777 7789
Q ss_pred cCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhc-cCcccccccCCCCcHHH
Q 042924 89 NRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRK-TQANYDAVNKQIVSVRH 167 (355)
Q Consensus 89 ~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~-~ga~~~~~n~~g~Tpl~ 167 (355)
..|+||||+|+.+|+.++++.|++ .|+++|.+|.+|+||||+|+..|+ .+++++|++ .|++++.+|.+|+||++
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~----~gad~n~~d~~G~TpLh~A~~~g~-~~iv~~Ll~~~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLA----CEADVNVQDDDGSTALMCACEHGH-KEIAGLLLAVPSCDISLTDRDGSTALM 255 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh----CCCCCCCCCCCCCCHHHHHHHCCC-HHHHHHHHhcCCCCCcCcCCCCCCHHH
Confidence 999999999999999999999999 789999999999999999999996 899999998 89999999999999999
Q ss_pred HHhhCCCchHHHHHHHHHHc
Q 042924 168 IFNYGYPELKEEIQKLSKDV 187 (355)
Q Consensus 168 ~a~~~~~~~~~~i~~~l~~~ 187 (355)
+|.... ..+++++|.+.
T Consensus 256 ~A~~~g---~~~iv~~Ll~~ 272 (276)
T 4hbd_A 256 VALDAG---QSEIASMLYSR 272 (276)
T ss_dssp HHHHHT---CHHHHHHHHHH
T ss_pred HHHHcC---CHHHHHHHHhc
Confidence 999665 45677777663
No 24
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.5e-29 Score=209.24 Aligned_cols=162 Identities=25% Similarity=0.263 Sum_probs=145.5
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHH
Q 042924 16 KETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFL 95 (355)
Q Consensus 16 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 95 (355)
......+.+|||+|++.|+.+++++|++++.++ +.++. .|.||||+|+..|+.+++++|++.+.++ +..|..|+|||
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 84 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDA-SGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPL 84 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHH
Confidence 345567889999999999999999999999887 77787 9999999999999999999999999988 88899999999
Q ss_pred HHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCc
Q 042924 96 HYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPE 175 (355)
Q Consensus 96 h~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~ 175 (355)
|+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|.||+++|....
T Consensus 85 ~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-- 157 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLK----NGADVNANDMEGHTPLHLAAMFGH-LEIVEVLLKNGADVNAQDKFGKTAFDISIDNG-- 157 (169)
T ss_dssp HHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT--
T ss_pred HHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC--
Confidence 99999999999999999 788999999999999999999996 99999999999999999999999999999765
Q ss_pred hHHHHHHHHHHcC
Q 042924 176 LKEEIQKLSKDVG 188 (355)
Q Consensus 176 ~~~~i~~~l~~~~ 188 (355)
..+++++|.+.|
T Consensus 158 -~~~~~~~L~~~G 169 (169)
T 2y1l_E 158 -NEDLAEILQKLN 169 (169)
T ss_dssp -CHHHHHHHHTC-
T ss_pred -CHHHHHHHHHcC
Confidence 457777777643
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=4.4e-29 Score=217.45 Aligned_cols=163 Identities=25% Similarity=0.240 Sum_probs=149.9
Q ss_pred HHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcc
Q 042924 4 LSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPEC 83 (355)
Q Consensus 4 v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 83 (355)
+.++|.+.+..++.+|..|.||||+|+..|+.+++++|++.++...+..+. .|.||||+|+..|+.+++++|++.++++
T Consensus 59 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 59 AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp HHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 334455567778999999999999999999999999999998544477787 8999999999999999999999999998
Q ss_pred ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCC
Q 042924 84 YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIV 163 (355)
Q Consensus 84 ~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~ 163 (355)
+.+|..|+||||+|+..|+.++++.|++ .|.+++.+|.+|+||||+|++.++ .+++++|+++|++++.+|.+|+
T Consensus 138 -~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~gad~~~~d~~g~ 211 (237)
T 3b7b_A 138 -NIRDNEENICLHWAAFSGCVDIAEILLA----AKCDLHAVNIHGDSPLHIAARENR-YDCVVLFLSRDSDVTLKNKEGE 211 (237)
T ss_dssp -TCCCTTSCCHHHHHHHHCCHHHHHHHHT----TTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHTTTCCTTCCCTTSC
T ss_pred -CccCCCCCCHHHHHHHCCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHhCC-HhHHHHHHHcCCCCCccCCCCC
Confidence 8889999999999999999999999999 788999999999999999999996 8999999999999999999999
Q ss_pred cHHHHHhhCC
Q 042924 164 SVRHIFNYGY 173 (355)
Q Consensus 164 Tpl~~a~~~~ 173 (355)
||+|+|....
T Consensus 212 t~l~~A~~~~ 221 (237)
T 3b7b_A 212 TPLQCASLNS 221 (237)
T ss_dssp CHHHHSCTTC
T ss_pred CHHHHHHHHH
Confidence 9999999665
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-29 Score=228.41 Aligned_cols=183 Identities=23% Similarity=0.148 Sum_probs=145.0
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++. +.+++.+|.+|.||||+||..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 54 ~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 54 EEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDN-EGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 356666655 5668999999999999999999999999999999987 78887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChh-----------------------hhhhhccCCCCCCcHHHHHHhc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPL-----------------------ARSLINEGDAKGNTPLHVLAAI 138 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~-----------------------~~~~~n~~d~~G~T~Lh~A~~~ 138 (355)
++ +..|..|.||||+|+..++.++++.++..... ........|..|+||||+|+..
T Consensus 131 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 131 HV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 88 77788888888888888887777776653110 0011123566788888888888
Q ss_pred CCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 139 RPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 139 ~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
|+ .+++++|++.|++++.+|.+|.||||+|+... ..+++++|.+.|.++.
T Consensus 210 g~-~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 210 GY-TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG---KEEACRILVENLCDME 259 (299)
T ss_dssp TC-HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT---CHHHHHHHHHTTCCTT
T ss_pred Cc-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC---CHHHHHHHHHcCCCCC
Confidence 85 77888888888888888888888888888655 4567777777665543
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=9.7e-30 Score=226.49 Aligned_cols=181 Identities=18% Similarity=0.131 Sum_probs=136.2
Q ss_pred hHHHHHHHhccc-------cccccCCCCChHHHHHHHcCCH-HHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHH
Q 042924 2 AALSKLLEIKKN-------LIKETDQYGWTPIHYAAYYGNY-GTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIV 73 (355)
Q Consensus 2 ~~v~~lL~~~~~-------~~~~~d~~G~tpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v 73 (355)
+.|+.||+.... .++..|..|.||||+|+..++. ++++.|++.|+++ +.++. +|+||||+|+..|+.+++
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~-~G~TpLh~A~~~g~~~~v 102 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ-DGSSPLHVAALHGRADLI 102 (269)
T ss_dssp HHHHHHHTCC----------------------------------------CCCCT-TCCCT-TSCCHHHHHHHTTCTTHH
T ss_pred HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCcHHHH
Confidence 456777765543 3567888999999999998875 4789999999998 88887 999999999999999999
Q ss_pred HHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCc
Q 042924 74 EAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQA 153 (355)
Q Consensus 74 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga 153 (355)
++|++.++++ +.++.+|.||+|+|+..++.++++.|++ .|.++|.+|.+|+||||+|+..|+ .+++++|+++|+
T Consensus 103 ~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~----~g~~~n~~d~~g~TpL~~A~~~g~-~~~v~~Ll~~ga 176 (269)
T 4b93_B 103 PLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLD----SNAKPNKKDLSGNTPLIYACSGGH-HELVALLLQHGA 176 (269)
T ss_dssp HHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCSCCCCTTCCCHHHHHHHTTC-GGGHHHHHHTTC
T ss_pred HHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHCCC-HHHHHHHHHCCC
Confidence 9999999998 8889999999999999999999999999 788999999999999999999996 899999999999
Q ss_pred ccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 154 NYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|+|.+|.+|.||||+|+..+ ..+++++|.+.|.++..
T Consensus 177 dvn~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 177 SINASNNKGNTALHEAVIEK---HVFVVELLLLHGASVQV 213 (269)
T ss_dssp CTTCBCTTSCBHHHHHHHTT---CHHHHHHHHHTTCCSCC
T ss_pred CCCccccCCCcHHHHHHHcC---CHHHHHHHHHCCCCCCC
Confidence 99999999999999999766 56789999998877653
No 28
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=223.07 Aligned_cols=173 Identities=19% Similarity=0.156 Sum_probs=151.9
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
+++.| .+.+.+++.+|.+|+||||+|+..|+.++++.|++++++. +. +. +|.||||+|+..|+.+++++|++.+++
T Consensus 51 ~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 126 (261)
T 2xai_A 51 CVKIL-LKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ES-DLASPIHEAARRGHVECVNSLIAYGGN 126 (261)
T ss_dssp HHHHH-HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SC-TTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHH-HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CC-CC-CCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 44444 4557789999999999999999999999999999999887 43 33 799999999999999999999999999
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
+ +.+|..|+||||+|+.+++.++++.|++ .|.++|. |.+|+||||+|+..++ .+++++|+++|+|++.+|.+|
T Consensus 127 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~-~~~g~t~Lh~A~~~~~-~~~v~~Ll~~gad~~~~d~~g 199 (261)
T 2xai_A 127 I-DHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQDSPLHAVARTAS-EELACLLMDFGADTQAKNAEG 199 (261)
T ss_dssp T-TCCBTTTBCHHHHHHHTTCHHHHHHHHH----HTCCTTC-CBTTBCHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTS
T ss_pred C-CcCCCCCCCHHHHHHHhCCHHHHHHHHH----cCCCCCC-CCCCCChHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCC
Confidence 8 8899999999999999999999999999 7788885 8999999999999996 899999999999999999999
Q ss_pred CcHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 163 VSVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
+||+|+|.... .+.++|.+.+..+
T Consensus 200 ~tpl~~A~~~~-----~~~~~ll~~~~~~ 223 (261)
T 2xai_A 200 KRPVELVPPES-----PLAQLFLEREGPP 223 (261)
T ss_dssp CCGGGGSCTTC-----THHHHHHHC-CCC
T ss_pred CChhhhccccc-----cHHHHHHhccCCc
Confidence 99999998543 3566666654433
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.5e-29 Score=218.89 Aligned_cols=163 Identities=26% Similarity=0.254 Sum_probs=146.2
Q ss_pred hHHHHHHHhcc-ccccc-cCCCCChHHHHHHHcCCHHHHHHhhccC--CCcccccccCCCchHHHHHHhcCCHHHHHHHh
Q 042924 2 AALSKLLEIKK-NLIKE-TDQYGWTPIHYAAYYGNYGTVNLLLETD--QSASNIADKDRKMTALHLAAGKGDARIVEAII 77 (355)
Q Consensus 2 ~~v~~lL~~~~-~~~~~-~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll 77 (355)
+.++.|++.++ .+++. +|..|+||||+|+..|+.++++.|++++ .+. +..+. .|.||||+|+..|+.+++++|+
T Consensus 50 ~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll 127 (228)
T 2dzn_A 50 EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITN-QGVTCLHLAVGKKWFEVSQFLI 127 (228)
T ss_dssp HHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCc-CCCCHHHHHHHcCCHhHHHHHH
Confidence 45666666651 33455 8899999999999999999999999998 555 66776 8999999999999999999999
Q ss_pred hhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhh-hhhccCCCCCCcHHHHHHhcCCchHHHHHHh-ccCccc
Q 042924 78 SKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLAR-SLINEGDAKGNTPLHVLAAIRPNEFDVDLVR-KTQANY 155 (355)
Q Consensus 78 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~-~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~-~~ga~~ 155 (355)
+.+.++ +.+|..|+||||+|+..|+.++++.|++ .| .++|.+|.+|+||||+|+..++ .+++++|+ +.|+++
T Consensus 128 ~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 128 ENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCG----LGKSAVNWQDKQGWTPLFHALAEGH-GDAAVLLVEKYGAEY 201 (228)
T ss_dssp HTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHT----TTCCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHHHHHCCCS
T ss_pred HcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHh----cCcccccCcCCCCCCHHHHHHHcCC-HHHHHHHHHhcCCCC
Confidence 999998 8899999999999999999999999999 66 7899999999999999999996 88999998 899999
Q ss_pred ccccCCCCcHHHHHhhC
Q 042924 156 DAVNKQIVSVRHIFNYG 172 (355)
Q Consensus 156 ~~~n~~g~Tpl~~a~~~ 172 (355)
+.+|.+|+||+++|.+.
T Consensus 202 ~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 202 DLVDNKGAKAEDVALNE 218 (228)
T ss_dssp CCBCTTSCBGGGGCSST
T ss_pred CccCCCCCcHHHHHHHH
Confidence 99999999999999743
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.8e-29 Score=209.14 Aligned_cols=158 Identities=18% Similarity=0.081 Sum_probs=141.9
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhc
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVS 101 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (355)
+.||||.|+..|+.++++.|++.++...+.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDE-RGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 578999999999999999999998886677887 9999999999999999999999999988 88899999999999999
Q ss_pred CChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHH
Q 042924 102 FRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQ 181 (355)
Q Consensus 102 ~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (355)
++.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|.||+|+|.... ..+++
T Consensus 80 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~---~~~~~ 151 (172)
T 3v30_A 80 GYTDIVGLLLE----RDVDINIYDWNGGTPLLYAVRGNH-VKCVEALLARGADLTTEADSGYTPMDLAVALG---YRKVQ 151 (172)
T ss_dssp TCHHHHHHHHT----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT---CHHHH
T ss_pred CCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCccccCCCCCCHHHHHHHhC---cHHHH
Confidence 99999999999 788999999999999999999996 89999999999999999999999999999655 45667
Q ss_pred HHHHHcCC
Q 042924 182 KLSKDVGR 189 (355)
Q Consensus 182 ~~l~~~~~ 189 (355)
++|.+.+.
T Consensus 152 ~~L~~~~~ 159 (172)
T 3v30_A 152 QVIENHIL 159 (172)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766443
No 31
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.4e-29 Score=209.91 Aligned_cols=156 Identities=24% Similarity=0.320 Sum_probs=142.0
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.++..++..++.+|..|+||||+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+.+++++|++.++
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (172)
T 3v30_A 16 DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAK-ERESALSLASTGGYTDIVGLLLERDV 93 (172)
T ss_dssp HHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcc-cCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 57889999988889999999999999999999999999999999987 77887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
++ +.+|..|+||||+|+.+++.++++.|++ .|++++.+|.+|+||||+|+..++ .+++++|+++|+++..+|..
T Consensus 94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~-~~~~~~L~~~~~~~~~~~~~ 167 (172)
T 3v30_A 94 DI-NIYDWNGGTPLLYAVRGNHVKCVEALLA----RGADLTTEADSGYTPMDLAVALGY-RKVQQVIENHILKLFQSNLV 167 (172)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHHHHHHSCC---
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHhCc-HHHHHHHHHHHHHHhcccCC
Confidence 98 8889999999999999999999999999 788999999999999999999995 99999999999999999999
Q ss_pred CCcH
Q 042924 162 IVSV 165 (355)
Q Consensus 162 g~Tp 165 (355)
|.||
T Consensus 168 ~~~p 171 (172)
T 3v30_A 168 PADP 171 (172)
T ss_dssp ----
T ss_pred CCCC
Confidence 9987
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=8e-30 Score=222.44 Aligned_cols=172 Identities=18% Similarity=0.131 Sum_probs=151.4
Q ss_pred HHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCC----CcccccccCCCchHHHHHHhcCCHHHHHHHhhh
Q 042924 4 LSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQ----SASNIADKDRKMTALHLAAGKGDARIVEAIISK 79 (355)
Q Consensus 4 v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~----~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~ 79 (355)
+.++|.+.+..++.+|.+|.||||+|+..|+.++++.|++.++ +. +..+. .|.||||+|+..|+.+++++|++.
T Consensus 61 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~ 138 (241)
T 1k1a_A 61 VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNY-DGLTALHVAVNTECQETVQLLLER 138 (241)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCc-CCCcHHHHHHHcCCHHHHHHHHHc
Confidence 3344455677789999999999999999999999999999887 44 66676 899999999999999999999999
Q ss_pred CCccccccc-cCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccc
Q 042924 80 NPECYELVD-NRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAV 158 (355)
Q Consensus 80 ~~~~~~~~d-~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~ 158 (355)
++++ +..| ..|+||||+|+.+|+.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|+++|++++.+
T Consensus 139 g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 139 GADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQ----HGANVNAQMYSGSSALHSASGRGL-LPLVRTLVRSGADSSLK 212 (241)
T ss_dssp TCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHHTC-HHHHHHHHHTTCCTTCC
T ss_pred CCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHhcCCCCCCc
Confidence 9998 5566 889999999999999999999999 788999999999999999999996 89999999999999999
Q ss_pred cCCCCcHHHHHhhCCCchHHHHHHHHHH
Q 042924 159 NKQIVSVRHIFNYGYPELKEEIQKLSKD 186 (355)
Q Consensus 159 n~~g~Tpl~~a~~~~~~~~~~i~~~l~~ 186 (355)
|.+|+||+|+|.... ..++++.|.+
T Consensus 213 ~~~g~tpl~~A~~~~---~~~i~~~l~~ 237 (241)
T 1k1a_A 213 NCHNDTPLMVARSRR---VIDILRGKAT 237 (241)
T ss_dssp CTTSCCTTTTCSSHH---HHHHHTC---
T ss_pred CCCCCCHHHHHHhcC---cHHHHhhhcc
Confidence 999999999998543 5566666554
No 33
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.5e-29 Score=211.18 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=149.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHH
Q 042924 19 DQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYA 98 (355)
Q Consensus 19 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (355)
+.++.+|||.|+..|+.++++.|++.++...+.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLA 79 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 357899999999999999999999987665588887 9999999999999999999999999998 88899999999999
Q ss_pred HhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHH
Q 042924 99 VVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKE 178 (355)
Q Consensus 99 ~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~ 178 (355)
+..|+.++++.|++ .|.++|.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|+||+++|.... ..
T Consensus 80 ~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~---~~ 151 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQ----YKADINAVNEHGNVPLHYACFWGQ-DQVAEDLVANGALVSICNKYGEMPVDKAKAPL---RE 151 (179)
T ss_dssp HHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH---HH
T ss_pred HHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCcchhccCCCCcHHHHHHHH---HH
Confidence 99999999999999 788999999999999999999996 89999999999999999999999999998644 77
Q ss_pred HHHHHHHHcCCCCCC
Q 042924 179 EIQKLSKDVGRGQYS 193 (355)
Q Consensus 179 ~i~~~l~~~~~~~~~ 193 (355)
++.++|.+.|.++..
T Consensus 152 ~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 152 LLRERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHHHHTTCCCSC
T ss_pred HHHHHHHHhhcCccc
Confidence 899999998877754
No 34
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=2.7e-29 Score=233.15 Aligned_cols=176 Identities=16% Similarity=0.116 Sum_probs=117.9
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCccc-------------------------------
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASN------------------------------- 50 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~------------------------------- 50 (355)
+.++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++.+++...
T Consensus 34 ~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 112 (364)
T 3ljn_A 34 DEVRRLIE-TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQ 112 (364)
T ss_dssp HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCC
Confidence 34555555 4667899999999999999999999999999998875421
Q ss_pred ---c-----------------cccCCCchHHHHHHhcC--CHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHH
Q 042924 51 ---I-----------------ADKDRKMTALHLAAGKG--DARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLT 108 (355)
Q Consensus 51 ---~-----------------~~~~~g~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~ 108 (355)
. .+. .|.||||+|+..| +.+++++|++.+.++ +.+|..|+||||+|+.+|+.++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~ 190 (364)
T 3ljn_A 113 MPESLLNECDEREVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALD 190 (364)
T ss_dssp CHHHHHTCCCCCCEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHhhcchHhhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHH
Confidence 0 333 5666666666666 666666666666665 556666666666666666666666
Q ss_pred HHHhcChhhhhh-----hccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHH
Q 042924 109 NLLENNPLARSL-----INEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKL 183 (355)
Q Consensus 109 ~Ll~~~~~~~~~-----~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~ 183 (355)
+|++ .+.+ +|.+|.+|+||||+|+..|+ .+++++|+++|+|++.+|.+|+|||++|+... ..+++++
T Consensus 191 ~Ll~----~g~~~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g---~~~~v~~ 262 (364)
T 3ljn_A 191 LMMD----TVPSKSSLRLDYANKQGNSHLHWAILINW-EDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA---MVLLTKE 262 (364)
T ss_dssp HHHH----HCSCSSSCCTTCCCTTCCCTTHHHHTTTC-HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC---CHHHHHH
T ss_pred HHHh----cccccccccccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC---hHHHHHH
Confidence 6666 3334 66666666666666666664 66666666666666666666666666666544 3455555
Q ss_pred HHHcC
Q 042924 184 SKDVG 188 (355)
Q Consensus 184 l~~~~ 188 (355)
|.+.+
T Consensus 263 Ll~~~ 267 (364)
T 3ljn_A 263 LLQKT 267 (364)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 55543
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.7e-29 Score=207.08 Aligned_cols=159 Identities=23% Similarity=0.251 Sum_probs=144.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHH
Q 042924 20 QYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAV 99 (355)
Q Consensus 20 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (355)
+...||||.|+..|+.++++.|++++.++ +.++. .|.||||+|+. |+.+++++|++.++++ +.+|..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV-NAQNG-FGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCT-TSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCc-cCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 45679999999999999999999999887 77787 99999999999 9999999999999988 888999999999999
Q ss_pred hcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc-cccccCCCCcHHHHHhhCCCchHH
Q 042924 100 VSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN-YDAVNKQIVSVRHIFNYGYPELKE 178 (355)
Q Consensus 100 ~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~-~~~~n~~g~Tpl~~a~~~~~~~~~ 178 (355)
.+|+.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|+++|++ ++.+|.+|+||+++|.... ..
T Consensus 79 ~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~---~~ 150 (162)
T 1ihb_A 79 RAGFLDTLQTLLE----FQADVNIEDNEGNLPLHLAAKEGH-LRVVEFLVKHTASNVGHRNHKGDTACDLARLYG---RN 150 (162)
T ss_dssp HHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT---CH
T ss_pred HcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC---CH
Confidence 9999999999999 788999999999999999999996 9999999999998 5999999999999999765 56
Q ss_pred HHHHHHHHcCCC
Q 042924 179 EIQKLSKDVGRG 190 (355)
Q Consensus 179 ~i~~~l~~~~~~ 190 (355)
+++++|.+.|++
T Consensus 151 ~~~~~Ll~~GAd 162 (162)
T 1ihb_A 151 EVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHhCCC
Confidence 888888887753
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=6.3e-29 Score=223.13 Aligned_cols=176 Identities=19% Similarity=0.148 Sum_probs=147.4
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
.++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.++. .|.||||+|+..|+.+++++|++.+++
T Consensus 74 ~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 150 (285)
T 3d9h_A 74 SLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTA-DWHTPLFNACVSGSWDCVNLLLQHGAS 150 (285)
T ss_dssp HHHHHHH-TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHH-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCHHHHHHHHHHCCCC
Confidence 4555555 45668889999999999999999999999999988877 77776 889999999999999999999998887
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
+ +. +.+|+||||+|+..|+.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|++.|++++. |..|
T Consensus 151 ~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~-~~~g 222 (285)
T 3d9h_A 151 V-QP-ESDLASPIHEAARRGHVECVNSLIA----YGGNIDHKISHLGTPLYLACENQQ-RACVKKLLESGADVNQ-GKGQ 222 (285)
T ss_dssp S-SC-SCTTSCHHHHHHHHTCHHHHHHHHH----TTCCTTCCBTTTBCHHHHHHHTTC-HHHHHHHHHTTCCTTC-CBTT
T ss_pred C-CC-CCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHHCCCCCCC-CCCC
Confidence 7 33 4558999999999999999999998 678889999999999999999985 8888999999999984 8889
Q ss_pred CcHHHHHhhCCCchHHHHHHHHHHcCCCCC
Q 042924 163 VSVRHIFNYGYPELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~ 192 (355)
.||||+|.... ..+++++|.+.|.++.
T Consensus 223 ~t~L~~A~~~~---~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 223 DSPLHAVVRTA---SEELACLLMDFGADTQ 249 (285)
T ss_dssp BCHHHHHHHTT---CHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHcC---CHHHHHHHHHCCCCCC
Confidence 99999998765 4578888888776654
No 37
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=3.8e-30 Score=235.64 Aligned_cols=166 Identities=18% Similarity=0.134 Sum_probs=143.3
Q ss_pred HHHHHHHhccccccc-cCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCC---HHHHHHHhh
Q 042924 3 ALSKLLEIKKNLIKE-TDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGD---ARIVEAIIS 78 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~-~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~---~~~v~~Ll~ 78 (355)
.+.++|...+.++|. +|.+|+||||+||..|+.+++++|+++|+++ +.++. .|+||||+|+..|+ .++++.|++
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~-~g~TpLh~A~~~g~~~~~~~~~~ll~ 188 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDN-MGESCLVKAVKSVNNYDSGTFEALLD 188 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhcccccHHHHHHHHH
Confidence 355666777888999 8999999999999999999999999999998 88887 99999999999999 788888888
Q ss_pred hCCccccccccCCchHHHHHHh----cCChhHHHHHHhcChhh----------------h--------------------
Q 042924 79 KNPECYELVDNRGWNFLHYAVV----SFRVEKLTNLLENNPLA----------------R-------------------- 118 (355)
Q Consensus 79 ~~~~~~~~~d~~g~t~Lh~A~~----~~~~~~~~~Ll~~~~~~----------------~-------------------- 118 (355)
.+....+.+|..|+||||+|++ .|+.++++.|++..... +
T Consensus 189 ~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~ 268 (327)
T 1sw6_A 189 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 268 (327)
T ss_dssp HHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSH
T ss_pred hhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHH
Confidence 8744458899999999999999 89999999998742100 1
Q ss_pred -----hhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhh
Q 042924 119 -----SLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNY 171 (355)
Q Consensus 119 -----~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~ 171 (355)
.++|.+|.+|+||||+|+..|+ .+++++|+++|+|++.+|.+|+||||+|+.
T Consensus 269 ~~Ll~~~~n~~d~~G~TpLh~A~~~g~-~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 269 KWIIANMLNAQDSNGDTCLNIAARLGN-ISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHHHHTTTCCCTTSCCHHHHHHHHCC-HHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 1488889999999999999995 888999999999999999999999998874
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=3.6e-29 Score=223.30 Aligned_cols=162 Identities=20% Similarity=0.118 Sum_probs=133.8
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCc----------------------------------
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSA---------------------------------- 48 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~---------------------------------- 48 (355)
+++. |.+++.+++.+|..|+||||+|+..|+.+++++|++++++.
T Consensus 60 ~v~~-Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (282)
T 1oy3_D 60 TVEK-LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138 (282)
T ss_dssp HHHH-HHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------
T ss_pred HHHH-HHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccch
Confidence 4444 45567779999999999999999999999999999987652
Q ss_pred ------------ccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcccccccc-CCchHHHHHHhcCChhHHHHHHhcCh
Q 042924 49 ------------SNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDN-RGWNFLHYAVVSFRVEKLTNLLENNP 115 (355)
Q Consensus 49 ------------~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~~~~~~Ll~~~~ 115 (355)
.+.++. .|.||||+|+..|+.+++++|++.++++ +.++. .|+||||+|+.+|+.+++++|++
T Consensus 139 ~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~--- 213 (282)
T 1oy3_D 139 EEEPRDEDWRLQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLK--- 213 (282)
T ss_dssp -----CCCGGGGTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH---
T ss_pred hhhhhhhhhhhcCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHH---
Confidence 244555 8999999999999999999999999998 56664 59999999999999999999999
Q ss_pred hhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhC
Q 042924 116 LARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYG 172 (355)
Q Consensus 116 ~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~ 172 (355)
.|++++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|.||++++...
T Consensus 214 -~gad~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 214 -AGADPTARMYGGRTPLGSALLRPN-PILARLLRAHGAPEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHTSSC-HHHHHHHHHTTCCCCCCC-------------
T ss_pred -cCCCCcccccCCCCHHHHHHHcCC-cHHHHHHHHcCCCcCcCCCcccccccccCCc
Confidence 789999999999999999999996 9999999999999999999999999999843
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=9.2e-30 Score=226.86 Aligned_cols=185 Identities=21% Similarity=0.195 Sum_probs=151.4
Q ss_pred HHHHHHHh---cccccc----ccCCCCChHHHHHHHc---CCHHHHHHhhccCCCcc------cc----cccCCCchHHH
Q 042924 3 ALSKLLEI---KKNLIK----ETDQYGWTPIHYAAYY---GNYGTVNLLLETDQSAS------NI----ADKDRKMTALH 62 (355)
Q Consensus 3 ~v~~lL~~---~~~~~~----~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~------~~----~~~~~g~tpLh 62 (355)
.++.|++. .+..++ .+|.+|+||||+|+.. |+.+++++|++.|++.. +. .+. .|.||||
T Consensus 28 ~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~-~g~tpL~ 106 (273)
T 2pnn_A 28 ELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYY-KGQTALH 106 (273)
T ss_dssp TTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTT-TTCCHHH
T ss_pred HHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccC-CCCCHHH
Confidence 34555552 444444 4589999999999987 99999999999876431 11 344 8999999
Q ss_pred HHHhcCCHHHHHHHhhhCCcccccccc--------------CCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCC
Q 042924 63 LAAGKGDARIVEAIISKNPECYELVDN--------------RGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKG 128 (355)
Q Consensus 63 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G 128 (355)
+|+..|+.+++++|++.++++ +.+|. .|+||||+|+.+|+.+++++|++... .|+++|.+|.+|
T Consensus 107 ~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~gad~~~~d~~g 184 (273)
T 2pnn_A 107 IAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW-QPADISARDSVG 184 (273)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTTS
T ss_pred HHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-CCCCceeeCCCC
Confidence 999999999999999999998 66776 79999999999999999999999321 257899999999
Q ss_pred CcHHHHHHhcCCc--------hHHHHHHhccCcccc-------cccCCCCcHHHHHhhCCCchHHHHHHHHHHcCC-CCC
Q 042924 129 NTPLHVLAAIRPN--------EFDVDLVRKTQANYD-------AVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGR-GQY 192 (355)
Q Consensus 129 ~T~Lh~A~~~~~~--------~~~~~lL~~~ga~~~-------~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~-~~~ 192 (355)
+||||+|+..++. .+++++|+++|++++ .+|.+|+||||+|+... ..+++++|.+.|+ +|.
T Consensus 185 ~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g---~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 185 NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG---KIGVLAYILQREIHEPE 261 (273)
T ss_dssp CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT---CHHHHHHHHHHHTC---
T ss_pred CcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC---hHHHHHHHHHCCCCCch
Confidence 9999999998853 578899999999997 59999999999999766 5688899988877 554
Q ss_pred C
Q 042924 193 S 193 (355)
Q Consensus 193 ~ 193 (355)
.
T Consensus 262 ~ 262 (273)
T 2pnn_A 262 C 262 (273)
T ss_dssp -
T ss_pred h
Confidence 3
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1e-28 Score=214.51 Aligned_cols=165 Identities=21% Similarity=0.175 Sum_probs=145.6
Q ss_pred CCChHHHHHHHcCCHHHHHHhhcc-CCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccc----cccccCCchHH
Q 042924 21 YGWTPIHYAAYYGNYGTVNLLLET-DQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECY----ELVDNRGWNFL 95 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~g~t~L 95 (355)
.|+||||+|++.|+.++++.|++. +.++ +.++. .|+||||+|+..|+.+++++|++.+++.. +.+|.+|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGA-MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 589999999999999999999998 6666 88887 99999999999999999999999998763 45677999999
Q ss_pred HHHHhcCChhHHHHHHhcChhhhhhhccCCC-------------CCCcHHHHHHhcCCchHHHHHHhccCcccccccCCC
Q 042924 96 HYAVVSFRVEKLTNLLENNPLARSLINEGDA-------------KGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQI 162 (355)
Q Consensus 96 h~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~-------------~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g 162 (355)
|+|+.+|+.++++.|++ .|.+++.++. +|+||||+|+..|+ .+++++|+++|++++.+|.+|
T Consensus 80 ~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g 154 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLA----RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGS-EEIVRLLIEHGADIRAQDSLG 154 (232)
T ss_dssp HHHHHTTCHHHHHHHHH----TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTC-HHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHh----CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCC
Confidence 99999999999999999 6677777765 79999999999996 999999999999999999999
Q ss_pred CcHHHHHhhCCC-chHHHHHHHHHHcCCCCC
Q 042924 163 VSVRHIFNYGYP-ELKEEIQKLSKDVGRGQY 192 (355)
Q Consensus 163 ~Tpl~~a~~~~~-~~~~~i~~~l~~~~~~~~ 192 (355)
.||||+|+.... +...+++++|.+.|..+.
T Consensus 155 ~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 155 NTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 999999996542 333556689999887664
No 41
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.5e-29 Score=202.86 Aligned_cols=151 Identities=20% Similarity=0.123 Sum_probs=138.5
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhc
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVS 101 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (355)
+.||||.|++.|+.++++.|++.+.+. + .+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCT-TCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 468999999999999999999998865 3 455 8999999999999999999999999988 88899999999999999
Q ss_pred CChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHH
Q 042924 102 FRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQ 181 (355)
Q Consensus 102 ~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (355)
|+.+++++|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|++++.+|.+|+||+++|.... ..+++
T Consensus 78 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~---~~~i~ 149 (153)
T 1awc_B 78 GHANIVEVLLK----HGADVNAKDMLKMTALHWATEHNH-QEVVELLIKYGADVHTQSKFCKTAFDISIDNG---NEDLA 149 (153)
T ss_dssp TCHHHHHHHHT----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHH
T ss_pred ChHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCccccCCCCCCHHHHHHHcC---CHHHH
Confidence 99999999999 788999999999999999999996 89999999999999999999999999999765 44566
Q ss_pred HHH
Q 042924 182 KLS 184 (355)
Q Consensus 182 ~~l 184 (355)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 655
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=7.4e-30 Score=225.68 Aligned_cols=176 Identities=23% Similarity=0.169 Sum_probs=147.9
Q ss_pred hccccccccC----CCCChHHHHHH---HcCCHHHHHHhhccCCCc----------ccccccCCCchHHHHHHhcCCHHH
Q 042924 10 IKKNLIKETD----QYGWTPIHYAA---YYGNYGTVNLLLETDQSA----------SNIADKDRKMTALHLAAGKGDARI 72 (355)
Q Consensus 10 ~~~~~~~~~d----~~G~tpLh~Aa---~~g~~~~v~~Ll~~~~~~----------~~~~~~~~g~tpLh~Aa~~g~~~~ 72 (355)
..+..++..+ .+|+||||+|+ +.|+.+++++|++.+++. .+..+. .|+||||+|+..|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~-~g~t~L~~A~~~g~~~~ 108 (260)
T 3jxi_A 30 THKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYY-RGQTALHIAIERRCKHY 108 (260)
T ss_dssp HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSE-ESBCHHHHHHHTTCHHH
T ss_pred hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccccccc-CCCCHHHHHHHcCCHHH
Confidence 4555566555 78999999999 779999999999987542 123333 89999999999999999
Q ss_pred HHHHhhhCCccccccc--------------cCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhc
Q 042924 73 VEAIISKNPECYELVD--------------NRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAI 138 (355)
Q Consensus 73 v~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~ 138 (355)
+++|++.++++ +.+| ..|+||||+|+..|+.+++++|++... .|+++|.+|.+|+||||+|+..
T Consensus 109 v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 109 VELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH-KQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-cCCCCcccCCCCCcHHHHHHHh
Confidence 99999999998 6677 689999999999999999999999321 3578999999999999999988
Q ss_pred CCc--------hHHHHHHhccCccc-------ccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 139 RPN--------EFDVDLVRKTQANY-------DAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 139 ~~~--------~~~~~lL~~~ga~~-------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
++. .+++++|+++|+++ +.+|.+|+||||+|+... ..+++++|.++|..+
T Consensus 187 ~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 187 ADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG---KIGIFQHIIRREIAD 251 (260)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC---CHHHHHHHHHhCCCc
Confidence 753 47889999999999 789999999999999766 567888888765443
No 43
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-28 Score=216.85 Aligned_cols=180 Identities=18% Similarity=0.085 Sum_probs=131.1
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
+++.|+ +.+.+++.+|.+|.||||+|+..|+.+++++|+++|.++ +.++. .|.||||+|+..|+.+++++|++.+++
T Consensus 54 ~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 130 (285)
T 1wdy_A 54 IVELLL-RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDF-YGFTAFMEAAVYGKVKALKFLYKRGAN 130 (285)
T ss_dssp HHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCc-ccCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence 344444 456667888888888888888888888888888888776 66666 788888888888888888888888777
Q ss_pred ccccc----------ccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCc---hHHHHHHh
Q 042924 83 CYELV----------DNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPN---EFDVDLVR 149 (355)
Q Consensus 83 ~~~~~----------d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~---~~~~~lL~ 149 (355)
+ +.. +..|.||||+|+..|+.++++.|++. .+.+++.+|..|+||||+|+..++. .+++++|+
T Consensus 131 ~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll 206 (285)
T 1wdy_A 131 V-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE---MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLL 206 (285)
T ss_dssp T-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT---SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHH
T ss_pred c-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh---cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHH
Confidence 6 443 66788888888888888888888873 2567777777777777777777642 45667777
Q ss_pred ccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHH-cCCCCC
Q 042924 150 KTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKD-VGRGQY 192 (355)
Q Consensus 150 ~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~-~~~~~~ 192 (355)
++|++++.+|.+|.||+|+|.... ..+++++|.+ .|.++.
T Consensus 207 ~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 207 DHGADVNVRGERGKTPLILAVEKK---HLGLVQRLLEQEHIEIN 247 (285)
T ss_dssp HTTCCSSCCCTTSCCHHHHHHHTT---CHHHHHHHHHSSSCCTT
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcC---CHHHHHHHHhccCCCcc
Confidence 777777777777777777777554 3455666655 454443
No 44
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=220.50 Aligned_cols=169 Identities=20% Similarity=0.172 Sum_probs=150.5
Q ss_pred HHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcc
Q 042924 4 LSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPEC 83 (355)
Q Consensus 4 v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 83 (355)
+.++|.+.+.+++.+|.+|.||||+|+..|+.+++++|++.+.+. +. +. .|.||||+|+..|+.+++++|++.++++
T Consensus 107 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 183 (285)
T 3d9h_A 107 CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ES-DLASPIHEAARRGHVECVNSLIAYGGNI 183 (285)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SC-TTSCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CC-CC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 334455567889999999999999999999999999999999876 43 33 6999999999999999999999999998
Q ss_pred ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCC
Q 042924 84 YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIV 163 (355)
Q Consensus 84 ~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~ 163 (355)
+.+|.+|+||||+|+.+|+.++++.|++ .|.+++. |.+|+||||+|+..++ .+++++|+++|++++.+|.+|+
T Consensus 184 -~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~-~~~g~t~L~~A~~~~~-~~~v~~Ll~~gad~~~~d~~g~ 256 (285)
T 3d9h_A 184 -DHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQDSPLHAVVRTAS-EELACLLMDFGADTQAKNAEGK 256 (285)
T ss_dssp -TCCBTTTBCHHHHHHHTTCHHHHHHHHH----TTCCTTC-CBTTBCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSC
T ss_pred -CCcCCCCCCHHHHHHHcCcHHHHHHHHH----CCCCCCC-CCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCcCCCCC
Confidence 8899999999999999999999999999 6778884 8999999999999996 8999999999999999999999
Q ss_pred cHHHHHhhCCCchHHHHHHHHHHc
Q 042924 164 SVRHIFNYGYPELKEEIQKLSKDV 187 (355)
Q Consensus 164 Tpl~~a~~~~~~~~~~i~~~l~~~ 187 (355)
||+|+|... .++.++|.+.
T Consensus 257 t~l~~A~~~-----~~~~~~Ll~~ 275 (285)
T 3d9h_A 257 RPVELVPPE-----SPLAQLFLER 275 (285)
T ss_dssp CGGGGSCTT-----SHHHHHHHHH
T ss_pred CHHHHhcCc-----cHHHHHHHHh
Confidence 999999843 3566776664
No 45
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=8.9e-29 Score=222.16 Aligned_cols=156 Identities=21% Similarity=0.142 Sum_probs=98.0
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
.+.++|..+ .++.+|.+|+||||+|+..|+.++++.|++.|+++ +.. +|.||||+|+..|+.+++++|++.+++
T Consensus 14 ~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 87 (285)
T 3kea_A 14 QLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL---ENEFPLHQAATLEDTKIVKILLFSGLD 87 (285)
T ss_dssp HHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC---TTCCHHHHHTTSSSCHHHHHHHHTTCC
T ss_pred HHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC---CCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 455566554 35677777777777777777777777777776554 222 466777777777777777777777766
Q ss_pred cccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCC-CcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 83 CYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKG-NTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G-~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
+ +.+|..|+||||+|+.+|+.+++++|++ .|++++.+|.+| +||||+|+..|+ .+++++|+++|++.... ..
T Consensus 88 ~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~g~~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~-~~ 160 (285)
T 3kea_A 88 D-SQFDDKGNTALYYAVDSGNMQTVKLFVK----KNWRLMFYGKTGWKTSFYHAVMLND-VSIVSYFLSEIPSTFDL-AI 160 (285)
T ss_dssp T-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----HCGGGGGCSSSGGGSHHHHHHHTTC-HHHHHHHHTTSCTTCCC-ST
T ss_pred C-CCcCCCCCcHHHHHHHcCCHHHHHHHHh----cCCCCCccCCCCCCCHHHHHHHcCC-HHHHHHHHhCCCccccc-cC
Confidence 6 5566677777777777777777777776 556666666666 566666666553 55555555555444211 14
Q ss_pred CCcHHHHHhh
Q 042924 162 IVSVRHIFNY 171 (355)
Q Consensus 162 g~Tpl~~a~~ 171 (355)
|.||||+|+.
T Consensus 161 g~t~L~~A~~ 170 (285)
T 3kea_A 161 LLSCIHITIK 170 (285)
T ss_dssp HHHHHHHHHH
T ss_pred CccHHHHHHH
Confidence 5555555553
No 46
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=5.6e-28 Score=229.59 Aligned_cols=173 Identities=25% Similarity=0.252 Sum_probs=127.9
Q ss_pred hccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcccccccc
Q 042924 10 IKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDN 89 (355)
Q Consensus 10 ~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~ 89 (355)
..+..++.++.+|.||||+|+..|+.++++.|++.+.+. +..+. .|.||||+|+..|+.+++++|++.+++. +..|.
T Consensus 200 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~ 276 (437)
T 1n11_A 200 PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESV-QGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNK 276 (437)
T ss_dssp GGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT
T ss_pred hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCC
Confidence 334445555566666666666666666666666666554 55554 6777777777777777777777777766 66777
Q ss_pred CCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHH
Q 042924 90 RGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIF 169 (355)
Q Consensus 90 ~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a 169 (355)
.|+||||+|++.|+.++++.|++ .|.++|.+|..|+||||+|+..|+ .+++++|+++|++++.+|..|.||||+|
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~gad~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIK----HGVMVDATTRMGYTPLHVASHYGN-IKLVKFLLQHQADVNAKTKLGYSPLHQA 351 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH----HTCCTTCCCSSCCCHHHHHHHSSC-SHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh----CCccCCCCCCCCCCHHHHHHHcCc-HHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 77788888887777777777777 677888888888888888888885 7788888888888888888888888888
Q ss_pred hhCCCchHHHHHHHHHHcCCCCCC
Q 042924 170 NYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 170 ~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
.... ..+++++|.+.|.++..
T Consensus 352 ~~~g---~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 352 AQQG---HTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHTT---CHHHHHHHHHTTCCSCC
T ss_pred HHCC---hHHHHHHHHHCcCCCCC
Confidence 8665 45788888888777654
No 47
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.3e-28 Score=230.41 Aligned_cols=171 Identities=23% Similarity=0.238 Sum_probs=155.7
Q ss_pred HHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccc
Q 042924 5 SKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECY 84 (355)
Q Consensus 5 ~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~ 84 (355)
.+.|.+.+..++.+|..|.||||+|+..|+.+++++|++++++. +..+. .|.||||+|+..|+.+++++|++.+.++
T Consensus 228 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~- 304 (437)
T 1n11_A 228 ARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNK-SGLTPLHLVAQEGHVPVADVLIKHGVMV- 304 (437)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHHTCCT-
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCccC-
Confidence 34444566678999999999999999999999999999999887 77887 9999999999999999999999999988
Q ss_pred cccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCc
Q 042924 85 ELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVS 164 (355)
Q Consensus 85 ~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~T 164 (355)
+.+|..|+||||+|+.+|+.+++++|++ .|+++|.+|..|+||||+|+..|+ .+++++|+++|++++.+|.+|+|
T Consensus 305 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~gad~n~~~~~g~t~L~~A~~~g~-~~iv~~Ll~~ga~~~~~~~~g~t 379 (437)
T 1n11_A 305 DATTRMGYTPLHVASHYGNIKLVKFLLQ----HQADVNAKTKLGYSPLHQAAQQGH-TDIVTLLLKNGASPNEVSSDGTT 379 (437)
T ss_dssp TCCCSSCCCHHHHHHHSSCSHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCSCCCCSSSCC
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHHh----cCCCCCCCCCCCCCHHHHHHHCCh-HHHHHHHHHCcCCCCCCCCCCCC
Confidence 8889999999999999999999999999 788999999999999999999996 99999999999999999999999
Q ss_pred HHHHHhhCCCchHHHHHHHHHH
Q 042924 165 VRHIFNYGYPELKEEIQKLSKD 186 (355)
Q Consensus 165 pl~~a~~~~~~~~~~i~~~l~~ 186 (355)
|+++|.... ...+.++|+.
T Consensus 380 ~l~~A~~~g---~~~~~~~l~~ 398 (437)
T 1n11_A 380 PLAIAKRLG---YISVTDVLKV 398 (437)
T ss_dssp HHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHcC---cHHHHHHHHh
Confidence 999999665 3456666655
No 48
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=2.9e-28 Score=227.20 Aligned_cols=175 Identities=18% Similarity=0.138 Sum_probs=140.1
Q ss_pred HHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhC---Cccc
Q 042924 8 LEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKN---PECY 84 (355)
Q Consensus 8 L~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~---~~~~ 84 (355)
|...+.++|.+|.+|.||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.+ .++
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~- 228 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDI- 228 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCC-CCCCHHHHHHHCCCHHHHHHHHhcCccccCh-
Confidence 34667778999999999999999999999999999998887 77776 8889999999999999999988876 454
Q ss_pred cccccCCchHHHHHHhcC---ChhHHHHHHhcChhhhhhhcc--------CCCCCCcHHHHHHhcCCchHHHHHHhccC-
Q 042924 85 ELVDNRGWNFLHYAVVSF---RVEKLTNLLENNPLARSLINE--------GDAKGNTPLHVLAAIRPNEFDVDLVRKTQ- 152 (355)
Q Consensus 85 ~~~d~~g~t~Lh~A~~~~---~~~~~~~Ll~~~~~~~~~~n~--------~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g- 152 (355)
+..|.+|+||||+|+..+ +.++++.|++ .|.+++. +|.+|+||||+|+..|+ .+++++|++.+
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~----~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v~~Ll~~~~ 303 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVE----KGAKVDYDGAARKDSEKYKGRTALHYAAQVSN-MPIVKYLVGEKG 303 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH----HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC-HHHHHHHHHHSC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHH----CCCCcccccccccCcccccCCCHHHHHHHhCC-HHHHHHHHHhcC
Confidence 667888888888888877 7788888888 5555554 66788888888888885 77777777665
Q ss_pred cccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 153 ANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 153 a~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
++++.+|.+|.||||+|+... ..+++++|.+.|.++..
T Consensus 304 ~~~n~~d~~g~TpL~~A~~~g---~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 304 SNKDKQDEDGKTPIMLAAQEG---RIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCTTCCCTTCCCHHHHHHHHT---CHHHHHHHHHTTCCSSC
T ss_pred CCccCcCCCCCCHHHHHHHcC---CHHHHHHHHHcCCCccC
Confidence 888888888888888888654 45677788777766543
No 49
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=8.7e-28 Score=208.95 Aligned_cols=182 Identities=17% Similarity=0.179 Sum_probs=161.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+|.+|.||||+|+..|+.+++++|++.+.+.....+. .|.||||+|+..|+.+++++|++.++
T Consensus 23 ~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~g~ 100 (240)
T 3eu9_A 23 ERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD-LNSTPLHWATRQGHLSMVVQLMKYGA 100 (240)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT-TTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC-cCCChhHHHHHcCCHHHHHHHHHcCC
Confidence 35566665 55668999999999999999999999999999999988555554 79999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccC-
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNK- 160 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~- 160 (355)
++ +.+|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..++...++++|++.|++++..+.
T Consensus 101 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~----~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~ 175 (240)
T 3eu9_A 101 DP-SLIDGEGCSCIHLAAQFGHTSIVAYLIA----KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY 175 (240)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTT
T ss_pred CC-cccCCCCCCHHHHHHHcCHHHHHHHHHh----cCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhcc
Confidence 88 7889999999999999999999999999 67899999999999999999888768899999999999999997
Q ss_pred CCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 161 QIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 161 ~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
.|.||||+|+... ..+++++|.+.|.++..
T Consensus 176 ~g~t~L~~A~~~~---~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 176 HKNTALHWAVLAG---NTTVISLLLEAGANVDA 205 (240)
T ss_dssp TCCCHHHHHHHHT---CHHHHHHHHHHTCCTTC
T ss_pred CCCcHHHHHHHcC---CHHHHHHHHHcCCCCCC
Confidence 9999999999665 45788888888877653
No 50
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=6e-28 Score=209.99 Aligned_cols=179 Identities=21% Similarity=0.238 Sum_probs=156.9
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++..+......+..|.||||+|+..|+.++++.|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 56 ~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~ 133 (240)
T 3eu9_A 56 DLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDG-EGCSCIHLAAQFGHTSIVAYLIAKGQ 133 (240)
T ss_dssp HHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCCCHHHHHHHcCHHHHHHHHHhcCC
Confidence 45677777666655566677999999999999999999999999887 77776 89999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCC-hhHHHHHHhcChhhhhhhccCCC-CCCcHHHHHHhcCCchHHHHHHhccCccccccc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFR-VEKLTNLLENNPLARSLINEGDA-KGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVN 159 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~-~~~~~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n 159 (355)
++ +.+|..|+||||+|+..++ .++++.|++ .+.+++.++. .|+||||+|+..++ .+++++|+++|++++.+|
T Consensus 134 ~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~----~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~ 207 (240)
T 3eu9_A 134 DV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLT----FNVSVNLGDKYHKNTALHWAVLAGN-TTVISLLLEAGANVDAQN 207 (240)
T ss_dssp CT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHH----TTCCTTCCCTTTCCCHHHHHHHHTC-HHHHHHHHHHTCCTTCBC
T ss_pred Cc-cccCCCCCcHHHHHHHhCChHHHHHHHHh----cCCCcchhhccCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcC
Confidence 88 8889999999999997766 788999988 7789999997 99999999999996 899999999999999999
Q ss_pred CCCCcHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 160 KQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 160 ~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
.+|+||+++|.... ..+++++|.+.+...
T Consensus 208 ~~g~t~l~~A~~~~---~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 208 IKGESALDLAKQRK---NVWMINHLQEARQAK 236 (240)
T ss_dssp TTSCBHHHHHHHTT---CHHHHHHHHHHC---
T ss_pred CCCCCHHHHHHHcC---cHHHHHHHHHhhhcc
Confidence 99999999999765 567888888765443
No 51
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=1.5e-28 Score=220.74 Aligned_cols=177 Identities=18% Similarity=0.066 Sum_probs=155.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+ +|+||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 45 ~~v~~Ll~-~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga 119 (285)
T 3kea_A 45 RLVCTLLN-AGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDD-KGNTALYYAVDSGNMQTVKLFVKKNW 119 (285)
T ss_dssp HHHHHHHH-TTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCG
T ss_pred HHHHHHHh-CCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-CCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 34555555 46667777 4999999999999999999999999987 77887 99999999999999999999999999
Q ss_pred ccccccccCC-chHHHHHHhcCChhHHHHHHhcChhhhhhhccCCC-CCCcHHHHHHhcCCchHHHHHHhccCccccccc
Q 042924 82 ECYELVDNRG-WNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDA-KGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVN 159 (355)
Q Consensus 82 ~~~~~~d~~g-~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n 159 (355)
++ +.+|..| .||||+|+..|+.+++++|++ .|... .|. +|+||||+|+..|+ .+++++|+++|++++.+|
T Consensus 120 ~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~----~g~~~--~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~gad~n~~~ 191 (285)
T 3kea_A 120 RL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLS----EIPST--FDLAILLSCIHITIKNGH-VDMMILLLDYMTSTNTNN 191 (285)
T ss_dssp GG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHT----TSCTT--CCCSTHHHHHHHHHHTTC-HHHHHHHHHHHHHTCTTC
T ss_pred CC-CccCCCCCCCHHHHHHHcCCHHHHHHHHh----CCCcc--ccccCCccHHHHHHHcCh-HHHHHHHHHcCCCCCccc
Confidence 98 8889999 899999999999999999999 44443 333 89999999999996 999999999999999999
Q ss_pred CCCCcH-HHHHhhCCCchHHHHHHHHHHcCCCCCCC
Q 042924 160 KQIVSV-RHIFNYGYPELKEEIQKLSKDVGRGQYSD 194 (355)
Q Consensus 160 ~~g~Tp-l~~a~~~~~~~~~~i~~~l~~~~~~~~~~ 194 (355)
..|.|| +|+|.... ..+++++|.+.|.++...
T Consensus 192 ~~g~t~~L~~A~~~~---~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 192 SLLFIPDIKLAIDNK---DIEMLQALFKYDINIYSA 224 (285)
T ss_dssp CCBCCTTHHHHHHHT---CHHHHHHHTTSCBCSTTT
T ss_pred CCCCChHHHHHHHcC---CHHHHHHHHHcCCCCCCC
Confidence 999998 99999765 568999999998887654
No 52
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=8.6e-29 Score=215.73 Aligned_cols=172 Identities=19% Similarity=0.140 Sum_probs=146.0
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHhhccCCC---cccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCc
Q 042924 16 KETDQYGWTPIHYAAYYGNYGTVNLLLETDQS---ASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGW 92 (355)
Q Consensus 16 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~---~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 92 (355)
+.+|++|+||||+|+..|+.++++.|++.+.. ..+.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|+
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 79 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGN 79 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-TCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence 46789999999999999999999999997763 2377776 8999999999999999999999999988 88899999
Q ss_pred hHHHHHHhcCChhHHHHHHhcChh--hhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccC-CCCcHHHHH
Q 042924 93 NFLHYAVVSFRVEKLTNLLENNPL--ARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNK-QIVSVRHIF 169 (355)
Q Consensus 93 t~Lh~A~~~~~~~~~~~Ll~~~~~--~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~-~g~Tpl~~a 169 (355)
||||+|+..|+.++++.|++.... ....++..|..|+||||+|+..|+ .+++++|+++|++++.++. .|.||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY-LGIVELLVSLGADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence 999999999999999999995421 123478899999999999999996 8999999999999999998 999999999
Q ss_pred hhCCCchHHHHHHHHHHcCCCCCC
Q 042924 170 NYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 170 ~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
+... ..+++++|.+.|.++..
T Consensus 159 ~~~~---~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 159 VDLQ---NPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHTT---CHHHHHHHHTTTCCSCC
T ss_pred HHcC---CHHHHHHHHHcCCCCCc
Confidence 9765 56889999988876653
No 53
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=8.9e-28 Score=220.77 Aligned_cols=170 Identities=22% Similarity=0.256 Sum_probs=140.0
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCc
Q 042924 3 ALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPE 82 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 82 (355)
+++.|+ +.+.+++.+|.+|+||||+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+.+++++|++.+++
T Consensus 73 ~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 73 IVQLLL-QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDL-WQFTPLHEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHH-HcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 344444 456667888888888888888888888888888888776 66665 788888888888888877777776543
Q ss_pred c-------------------------------------------------------------------------------
Q 042924 83 C------------------------------------------------------------------------------- 83 (355)
Q Consensus 83 ~------------------------------------------------------------------------------- 83 (355)
+
T Consensus 150 ~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~ 229 (351)
T 3utm_A 150 PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQV 229 (351)
T ss_dssp TTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHH
T ss_pred CccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHH
Confidence 2
Q ss_pred ----------ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCc
Q 042924 84 ----------YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQA 153 (355)
Q Consensus 84 ----------~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga 153 (355)
.+.+|.+|+||||+|+++|+.++++.|++ .|+++|.+|..|+||||+|+..|+ .+++++|+++|+
T Consensus 230 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~n~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga 304 (351)
T 3utm_A 230 AELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK----HGAKMNALDSLGQTALHRAALAGH-LQTCRLLLSYGS 304 (351)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC
T ss_pred HHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHHcCC
Confidence 14467889999999999999999999999 789999999999999999999996 999999999999
Q ss_pred ccccccCCCCcHHHHHhhCCCchHHHHHHHHHHc
Q 042924 154 NYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDV 187 (355)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~ 187 (355)
+++.+|.+|+||+++|. +.+.+++.+.
T Consensus 305 d~~~~~~~g~tal~~a~-------~~~~~~l~~~ 331 (351)
T 3utm_A 305 DPSIISLQGFTAAQMGN-------EAVQQILSES 331 (351)
T ss_dssp CTTCCCTTSCCHHHHSC-------HHHHHHHHHC
T ss_pred CCCCcCCCCCChhhhhh-------HHHHHHHHhc
Confidence 99999999999999983 3566666663
No 54
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2.6e-27 Score=211.11 Aligned_cols=183 Identities=22% Similarity=0.211 Sum_probs=159.9
Q ss_pred hHHHHHHHhcccccccc-CCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhC
Q 042924 2 AALSKLLEIKKNLIKET-DQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKN 80 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~-d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~ 80 (355)
+.++.|++.+++ ++.. +..|+||||+|+..|+.+++++|+++|.++ +.++. .|.||||+|+..|+.+++++|++.+
T Consensus 19 ~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 19 DLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKK-NGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp HHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 456777766554 5666 889999999999999999999999999987 77777 9999999999999999999999999
Q ss_pred CccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccC----------CCCCCcHHHHHHhcCCchHHHHHHhc
Q 042924 81 PECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEG----------DAKGNTPLHVLAAIRPNEFDVDLVRK 150 (355)
Q Consensus 81 ~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~----------d~~G~T~Lh~A~~~~~~~~~~~lL~~ 150 (355)
+++ +..|..|+||||+|+..|+.++++.|++ .|.+++.+ |..|.||||+|+..|+ .+++++|++
T Consensus 96 ~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~ 169 (285)
T 1wdy_A 96 ADV-NECDFYGFTAFMEAAVYGKVKALKFLYK----RGANVNLRRKTKEDQERLRKGGATALMDAAEKGH-VEVLKILLD 169 (285)
T ss_dssp CCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHH----TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC-HHHHHHHHH
T ss_pred CCC-CccCcccCCHHHHHHHhCCHHHHHHHHH----hCCCcccccccHHHHHhhccCCCcHHHHHHHcCC-HHHHHHHHH
Confidence 998 8889999999999999999999999999 56677766 8889999999999996 888888887
Q ss_pred c-CcccccccCCCCcHHHHHhhCCC-chHHHHHHHHHHcCCCCCC
Q 042924 151 T-QANYDAVNKQIVSVRHIFNYGYP-ELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 151 ~-ga~~~~~n~~g~Tpl~~a~~~~~-~~~~~i~~~l~~~~~~~~~ 193 (355)
. |++++.+|..|.||++.|..... +...+++++|.+.|.++..
T Consensus 170 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~ 214 (285)
T 1wdy_A 170 EMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214 (285)
T ss_dssp TSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC
T ss_pred hcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC
Confidence 6 99999999999999999985432 2247889999998876643
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=4.5e-28 Score=197.38 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=138.4
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhc
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVS 101 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (355)
|.||||.|+..|+.++++.|++......+..+. .|.||||+ +..|+.+++++|++.++++ +.+|..|+||||+|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNR-FGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT-TSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCC-CCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 569999999999999999999983323377777 89999999 9999999999999999998 88999999999999999
Q ss_pred CChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHH
Q 042924 102 FRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQ 181 (355)
Q Consensus 102 ~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (355)
|+.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|++. ++++.+|.+|.||+++|.... ..+++
T Consensus 79 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~---~~~~v 149 (156)
T 1bd8_A 79 GFLDTLKVLVE----HGADVNVPDGTGALPIHLAVQEGH-TAVVSFLAAE-SDLHRRDARGLTPLELALQRG---AQDLV 149 (156)
T ss_dssp TCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHHTC-HHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSC---CHHHH
T ss_pred CcHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHHhCh-HHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcC---cHHHH
Confidence 99999999999 788999999999999999999996 8999999999 999999999999999999765 45667
Q ss_pred HHHHH
Q 042924 182 KLSKD 186 (355)
Q Consensus 182 ~~l~~ 186 (355)
++|.+
T Consensus 150 ~~Ll~ 154 (156)
T 1bd8_A 150 DILQG 154 (156)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 76654
No 56
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=2.1e-28 Score=199.73 Aligned_cols=146 Identities=17% Similarity=0.137 Sum_probs=118.4
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCch-
Q 042924 15 IKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWN- 93 (355)
Q Consensus 15 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t- 93 (355)
.+..++.|.||||+|+..|+.++++.|+++|.++ +.++. .|+||||+|+ .|+.+++++|++.+.++ +.+|..|+|
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~tt 80 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTR 80 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcH
Confidence 4677899999999999999999999999999887 78887 9999999985 99999999999999988 889999999
Q ss_pred HHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHH
Q 042924 94 FLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIF 169 (355)
Q Consensus 94 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a 169 (355)
|||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++ .+++++|+++|++++.+|..|.||.+-+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHR----AGARLDVRDAWGRLPVDLAEELGH-RDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHH----HTCCSSCCCTTCCCHHHHHHHHTC-HHHHHHHSSCC-----------------
T ss_pred HHHHHHHCCCHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHhCH-HHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999 789999999999999999999996 8999999999999999999999998743
No 57
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=7.1e-28 Score=224.54 Aligned_cols=177 Identities=18% Similarity=0.173 Sum_probs=156.1
Q ss_pred HHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccC---CCcccccccCCCchHHHHHHhcC---CHHHHHHHh
Q 042924 4 LSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETD---QSASNIADKDRKMTALHLAAGKG---DARIVEAII 77 (355)
Q Consensus 4 v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~---~~~~~~~~~~~g~tpLh~Aa~~g---~~~~v~~Ll 77 (355)
+.++|.+.+.+++.+|.+|.||||+|+..|+.+++++|++.+ .+. +..+. .|.||||+|+..| +.+++++|+
T Consensus 181 iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~-~g~t~L~~A~~~~~~~~~~~v~~Ll 258 (373)
T 2fo1_E 181 LVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDR-NGMTALMIVAHNEGRDQVASAKLLV 258 (373)
T ss_dssp HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCT-TSCCHHHHHHHSCSTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCC-CCCCHHHHHHHhCCcchHHHHHHHH
Confidence 444555567789999999999999999999999999999987 455 77777 9999999999998 899999999
Q ss_pred hhCCcccc-------ccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhc
Q 042924 78 SKNPECYE-------LVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRK 150 (355)
Q Consensus 78 ~~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~ 150 (355)
+.++++.. ..|..|+||||+|+.+|+.+++++|++. .+.++|.+|.+|+||||+|+..|+ .+++++|++
T Consensus 259 ~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~d~~g~TpL~~A~~~g~-~~iv~~Ll~ 334 (373)
T 2fo1_E 259 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE---KGSNKDKQDEDGKTPIMLAAQEGR-IEVVMYLIQ 334 (373)
T ss_dssp HHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH---SCCCTTCCCTTCCCHHHHHHHHTC-HHHHHHHHH
T ss_pred HCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh---cCCCccCcCCCCCCHHHHHHHcCC-HHHHHHHHH
Confidence 99998832 2577999999999999999999999983 238999999999999999999996 999999999
Q ss_pred cCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCC
Q 042924 151 TQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGR 189 (355)
Q Consensus 151 ~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 189 (355)
+|++++.+|.+|+||+++|.... ..+++++|.+.+.
T Consensus 335 ~gad~~~~d~~g~t~l~~A~~~g---~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 335 QGASVEAVDATDHTARQLAQANN---HHNIVDIFDRCRP 370 (373)
T ss_dssp TTCCSSCCCSSSCCHHHHHHHTT---CHHHHHHHHTTC-
T ss_pred cCCCccCCCCCCCCHHHHHHHcC---CHHHHHHHHhcCc
Confidence 99999999999999999999765 5688888887554
No 58
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.4e-28 Score=202.31 Aligned_cols=153 Identities=23% Similarity=0.330 Sum_probs=143.8
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.+++..+.+++.+|..|+||||+|+..|+.+++++|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (179)
T 3f6q_A 19 VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNR-GDDTPLHLAASHGHRDIVQKLLQYKA 96 (179)
T ss_dssp HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56888888889999999999999999999999999999999999987 77887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQ 161 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~ 161 (355)
++ +.+|..|+||||+|+..++.++++.|++ .|++++.+|.+|+||||+|+..++ ..++++|++.|++++..+.+
T Consensus 97 ~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~-~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 97 DI-NAVNEHGNVPLHYACFWGQDQVAEDLVA----NGALVSICNKYGEMPVDKAKAPLR-ELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCSSBCCTTSCCGGGGSCHHHH-HHHHHHHHHTTCCCSCBCCC
T ss_pred CC-CccCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCcchhccCCCCcHHHHHHHHH-HHHHHHHHHhhcCcccCCcc
Confidence 98 8899999999999999999999999999 788999999999999999999995 89999999999999987765
Q ss_pred C
Q 042924 162 I 162 (355)
Q Consensus 162 g 162 (355)
+
T Consensus 171 ~ 171 (179)
T 3f6q_A 171 D 171 (179)
T ss_dssp C
T ss_pred c
Confidence 5
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=3.6e-27 Score=200.02 Aligned_cols=169 Identities=21% Similarity=0.145 Sum_probs=151.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHH
Q 042924 19 DQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYA 98 (355)
Q Consensus 19 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (355)
+..+.||||.|+..|+.+.++.|++.++...+..+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT-EGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 467999999999999999999999988844488887 9999999999999999999999999998 88999999999999
Q ss_pred HhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC-cccccccCCCCcHHHHHhhCCC--c
Q 042924 99 VVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ-ANYDAVNKQIVSVRHIFNYGYP--E 175 (355)
Q Consensus 99 ~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g-a~~~~~n~~g~Tpl~~a~~~~~--~ 175 (355)
+..|+.++++.|++. .+.+++.+|.+|+||||+|+..++ .+++++|++.| ++++.+|.+|.||+|+|+.... .
T Consensus 80 ~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 80 GAQGRTEILAYMLKH---ATPDLNKHNRYGGNALIPAAEKGH-IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp HHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSHHHHHHTTC-HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred HHcCCHHHHHHHHhc---cCcccccccCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999999999999964 456899999999999999999996 89999999998 9999999999999999995543 2
Q ss_pred hHHHHHHHHHHcCCCCCC
Q 042924 176 LKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 176 ~~~~i~~~l~~~~~~~~~ 193 (355)
...+++++|.+.|.++..
T Consensus 156 ~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 156 LYQDIVKLLMENGADQSI 173 (201)
T ss_dssp HHHHHHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHCCCCCCc
Confidence 237899999998877654
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=2.6e-27 Score=213.42 Aligned_cols=164 Identities=21% Similarity=0.177 Sum_probs=142.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHH
Q 042924 19 DQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYA 98 (355)
Q Consensus 19 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (355)
+.+|.||||.||..|+.++++.|++.|.++ +..+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A 113 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANV-DGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAA 113 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 346789999999999999999999999887 77887 9999999999999999999999999998 88899999999999
Q ss_pred HhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHH-HHhccCccccc--------------------
Q 042924 99 VVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVD-LVRKTQANYDA-------------------- 157 (355)
Q Consensus 99 ~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~-lL~~~ga~~~~-------------------- 157 (355)
+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++ ..+++ ++...+++++.
T Consensus 114 ~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (299)
T 1s70_B 114 ASCGYLDIAEYLIS----QGAHVGAVNSEGDTPLDIAEEEAM-EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSG 188 (299)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCCSHHH-HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHhcch-HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999 788999999999999999999885 55554 44455555443
Q ss_pred ------ccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 158 ------VNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 158 ------~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
.+..|.||||+|+... ..+++++|.+.|.++..
T Consensus 189 ~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~d~~~ 227 (299)
T 1s70_B 189 HINDVRHAKSGGTALHVAAAKG---YTEVLKLLIQARYDVNI 227 (299)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHT---CHHHHHHHHTTTCCTTC
T ss_pred CcchhhhcCCCCCHHHHHHHCC---cHHHHHHHHHcCCCCCC
Confidence 5678999999999665 45788888887766543
No 61
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=7.9e-28 Score=223.19 Aligned_cols=170 Identities=25% Similarity=0.176 Sum_probs=112.7
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcccc------
Q 042924 12 KNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYE------ 85 (355)
Q Consensus 12 ~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~------ 85 (355)
..+.+..|.+|+||||+||..|+.+++++|++.|.++ +.++. .|.||||+|+..|+.+++++|++.+++...
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~ 87 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNR-FGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKP 87 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCH
Confidence 3456788999999999999999999999999999887 88887 999999999999999999999999885521
Q ss_pred ---------------------------------------------ccccCCchHHHHHHhcC--ChhHHHHHHhcChhhh
Q 042924 86 ---------------------------------------------LVDNRGWNFLHYAVVSF--RVEKLTNLLENNPLAR 118 (355)
Q Consensus 86 ---------------------------------------------~~d~~g~t~Lh~A~~~~--~~~~~~~Ll~~~~~~~ 118 (355)
..|..|+||||+|+..| +.+++++|++ .|
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~----~g 163 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ----LG 163 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH----HT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH----cC
Confidence 03444555555555555 5555555555 44
Q ss_pred hhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc-----cccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 119 SLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN-----YDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 119 ~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~-----~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
++++.+|.+|+||||+|+..|+ .+++++|++.|++ ++.+|.+|.||||+|+... ..+++++|.+.|.++
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRN-REALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN---WEDVAMRFVEMGIDV 237 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT---CHHHHHHHHTTTCCT
T ss_pred CCCcccCCCCCCHHHHHHHcCC-HHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCC
Confidence 5555555555555555555553 5555555555555 5555555555555555433 334555555555444
No 62
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=7e-28 Score=191.95 Aligned_cols=134 Identities=18% Similarity=0.118 Sum_probs=125.8
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccC-
Q 042924 12 KNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNR- 90 (355)
Q Consensus 12 ~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~- 90 (355)
+.+++.+|..|.||||+|+..|+.+++++|++++.++ +.++. .|+||||+|+. |+.+++++|++.++++ +.+|..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~ 77 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNR-FGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPAT 77 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCC-CCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCC
Confidence 4568999999999999999999999999999999887 77887 99999999999 9999999999999998 888999
Q ss_pred CchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc
Q 042924 91 GWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN 154 (355)
Q Consensus 91 g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~ 154 (355)
|+||||+|+..|+.++++.|++ .|++++.+|.+|+||||+|+..++ .+++++|+++|+|
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~-~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHR----AGARLDVCDAWGRLPVDLAEEQGH-RDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHH----TCCCCCCCSSSSSCHHHHHHHHTC-HHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCC
Confidence 9999999999999999999999 788999999999999999999996 9999999999886
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=5.5e-27 Score=192.02 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=129.1
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+..++.+|..|+||||+|+. |+.+++++|++++.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 19 ~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 19 EQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDR-TGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34555554 667789999999999999999 9999999999999887 77887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhh-hccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSL-INEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN 154 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~-~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~ 154 (355)
++ +.+|.+|+||||+|++.|+.+++++|++ .|.+ ++.+|.+|+||||+|+..++ .+++++|+++|+|
T Consensus 95 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 95 DV-NIEDNEGNLPLHLAAKEGHLRVVEFLVK----HTASNVGHRNHKGDTACDLARLYGR-NEVVSLMQANGAG 162 (162)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----HSCCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTC--
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----ccCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHHhCCC
Confidence 88 8899999999999999999999999999 5665 69999999999999999996 9999999999986
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=2.1e-26 Score=190.32 Aligned_cols=142 Identities=27% Similarity=0.386 Sum_probs=129.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+|.+|.||||+|+..|+.+++++|++++.+. +..+. .|.||||+|+..|+.+++++|++.++
T Consensus 28 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~ 104 (169)
T 2y1l_E 28 DEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDH-AGMTPLRLAALFGHLEIVEVLLKNGA 104 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34555555 56778999999999999999999999999999999887 77787 89999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ 152 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (355)
++ +.+|.+|+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..++ .+++++|++.|
T Consensus 105 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~L~~~G 169 (169)
T 2y1l_E 105 DV-NANDMEGHTPLHLAAMFGHLEIVEVLLK----NGADVNAQDKFGKTAFDISIDNGN-EDLAEILQKLN 169 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHTC-
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHhCC-HHHHHHHHHcC
Confidence 98 8889999999999999999999999999 788999999999999999999996 89999998875
No 65
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1e-27 Score=209.63 Aligned_cols=161 Identities=16% Similarity=0.100 Sum_probs=110.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHH
Q 042924 19 DQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYA 98 (355)
Q Consensus 19 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (355)
+..|.||||.|++.|+.+.++.|+++|.++ +.. . .|.||||.|+..|+.++++.|++.++++ +.+|..|+||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~~-~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-KFN-P-LPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-ccC-c-hhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 467999999999999999999999999887 443 3 7899999999999999999999999987 88999999999999
Q ss_pred HhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCC-cHHHHHhhCCCchH
Q 042924 99 VVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIV-SVRHIFNYGYPELK 177 (355)
Q Consensus 99 ~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~-Tpl~~a~~~~~~~~ 177 (355)
+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+ .+++++|+++|++++.+|..|. ||+|+|...... .
T Consensus 78 ~~~g~~~~v~~Ll~----~ga~~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g-~ 151 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQ----FGVNVNAADSDGWTPLHCAASCNN-VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG-Y 151 (239)
T ss_dssp HHHTCHHHHHHHHH----HTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTT-C
T ss_pred HHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhc-c
Confidence 99999999999999 789999999999999999999996 9999999999999999998887 999999421111 2
Q ss_pred HHHHHHHHHcCC
Q 042924 178 EEIQKLSKDVGR 189 (355)
Q Consensus 178 ~~i~~~l~~~~~ 189 (355)
.+++++|.+.+.
T Consensus 152 ~~~~~~Ll~~~a 163 (239)
T 1ycs_B 152 TQCSQFLYGVQE 163 (239)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 345666665443
No 66
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5e-27 Score=193.07 Aligned_cols=143 Identities=24% Similarity=0.305 Sum_probs=131.8
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++..+...+..|..|.||||+|+..|+.+++++|++++.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 22 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 99 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDK-GGLVPLHNACSYGHYEVAELLVKHGA 99 (165)
T ss_dssp HHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCC-CCCCHHHHHHHcCcHHHHHHHHhCCC
Confidence 56788888888888999999999999999999999999999999987 78887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQA 153 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga 153 (355)
++ +.+|..|+||||+|+.+++.++++.|++ .|++++.+|.+|+||||+|+. ++ .+++++|+++|+
T Consensus 100 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~a~~-~~-~~i~~~L~~~gA 164 (165)
T 3twr_A 100 VV-NVADLWKFTPLHEAAAKGKYEICKLLLQ----HGADPTKKNRDGNTPLDLVKD-GD-TDIQDLLRGDAA 164 (165)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCTGGGSCT-TC-HHHHHHHHTC--
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCcccCCCCCChhHhHhc-CC-hHHHHHHhhccc
Confidence 98 8889999999999999999999999999 788999999999999999877 64 799999998876
No 67
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=3.7e-27 Score=207.91 Aligned_cols=164 Identities=13% Similarity=0.051 Sum_probs=139.0
Q ss_pred CCChHHHHHHHcCCHH----HHHHhhccCCCcccc----cccCCCchHHHHHHhc---CCHHHHHHHhhhCCcccc----
Q 042924 21 YGWTPIHYAAYYGNYG----TVNLLLETDQSASNI----ADKDRKMTALHLAAGK---GDARIVEAIISKNPECYE---- 85 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~----~v~~Ll~~~~~~~~~----~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~---- 85 (355)
.|+||||+|+..|+.+ ++++|++.+.++ +. ++. .|+||||+|+.. |+.+++++|++.+++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~-~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGS-TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTT-TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCC-CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 4899999999999997 556677788887 55 676 999999999999 999999999999876521
Q ss_pred ------ccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCC-------------CCcHHHHHHhcCCchHHHH
Q 042924 86 ------LVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAK-------------GNTPLHVLAAIRPNEFDVD 146 (355)
Q Consensus 86 ------~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~-------------G~T~Lh~A~~~~~~~~~~~ 146 (355)
..|..|+||||+|+..|+.++++.|++ .|+++|.+|.. |+||||+|+..|+ .++++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~-~~~v~ 153 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVE----NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQ-WDVVT 153 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC-HHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHH----cCCCCCcccccccccccccccccCCCCHHHHHHHcCC-HHHHH
Confidence 234789999999999999999999999 78899999886 9999999999996 89999
Q ss_pred HHhc---cCcccccccCCCCcHHHHHhhC-CCchH-----HHHHHHHHHcCCCC
Q 042924 147 LVRK---TQANYDAVNKQIVSVRHIFNYG-YPELK-----EEIQKLSKDVGRGQ 191 (355)
Q Consensus 147 lL~~---~ga~~~~~n~~g~Tpl~~a~~~-~~~~~-----~~i~~~l~~~~~~~ 191 (355)
+|++ .|++++.+|.+|+||||+|+.. ..... .+++++|.+.|.++
T Consensus 154 ~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 154 YLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999 9999999999999999999962 22111 13788888766554
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.1e-26 Score=189.67 Aligned_cols=146 Identities=25% Similarity=0.301 Sum_probs=134.0
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++. +..++.+|.+|.||||+|+..|+.+++++|++.+.++ +..+. .|.||||+|+..|+.+++++|++.++
T Consensus 17 ~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 17 LYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGK-GRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp HHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCC-CCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 456677766 4668999999999999999999999999999999887 77777 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYD 156 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~ 156 (355)
++ +.+|..|+||||+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..|+ .+++++|++++.+..
T Consensus 94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 94 DV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE----SGADPTIETDSGYNSMDLAVALGY-RSVQQVIESHLLKLL 162 (167)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHHHHHHC
T ss_pred CC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHHHHHHHH
Confidence 98 8889999999999999999999999999 788999999999999999999996 999999998877654
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=2.8e-26 Score=186.72 Aligned_cols=140 Identities=21% Similarity=0.265 Sum_probs=129.6
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.+++..+.+++.+|..|+||||+ +..|+.++++.|+++|.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDT-SGTSPVHDAARTGFLDTLKVLVEHGA 92 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 567888888666889999999999999 9999999999999999987 88887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhcc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKT 151 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ 151 (355)
++ +.+|..|+||||+|+.+|+.+++++|++ . .+++.+|.+|+||||+|+..|+ .+++++|+++
T Consensus 93 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~-~~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~ 155 (156)
T 1bd8_A 93 DV-NVPDGTGALPIHLAVQEGHTAVVSFLAA----E-SDLHRRDARGLTPLELALQRGA-QDLVDILQGH 155 (156)
T ss_dssp CS-CCCCTTSCCHHHHHHHHTCHHHHHHHHT----T-SCTTCCCTTSCCHHHHHHHSCC-HHHHHHHHTT
T ss_pred CC-CCcCCCCCcHHHHHHHhChHHHHHHHHh----c-cCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHhh
Confidence 88 8889999999999999999999999998 5 7899999999999999999996 8899988764
No 70
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=6.7e-26 Score=208.00 Aligned_cols=176 Identities=22% Similarity=0.221 Sum_probs=147.6
Q ss_pred HHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCccccccc---------CCCchHHHHHHhcCCHHHHHHHhh
Q 042924 8 LEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADK---------DRKMTALHLAAGKGDARIVEAIIS 78 (355)
Q Consensus 8 L~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~---------~~g~tpLh~Aa~~g~~~~v~~Ll~ 78 (355)
+...+.+++.+|..|+||||+|+..|+.++++.|+++|+++ +.... ..|.||||+|+..|+.+++++|++
T Consensus 111 ~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~-~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~ 189 (337)
T 4g8k_A 111 FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 189 (337)
T ss_dssp HHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHH
T ss_pred hhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCc-chhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHh
Confidence 33445567888999999999999999999999999998876 32221 268999999999999999999997
Q ss_pred h-CCccccccccCCchHHHHHHhcCC----hhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhc-cC
Q 042924 79 K-NPECYELVDNRGWNFLHYAVVSFR----VEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRK-TQ 152 (355)
Q Consensus 79 ~-~~~~~~~~d~~g~t~Lh~A~~~~~----~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~-~g 152 (355)
+ +.++ +.+|..|+|++|.++..++ ..++++|++ .|+++|.+|.+|+||||+|+..|+ .++++.|++ .|
T Consensus 190 ~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~----~gad~n~~d~~g~t~L~~a~~~~~-~~~v~~Ll~~~~ 263 (337)
T 4g8k_A 190 EMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLD----HGADVNVRGERGKTPLILAVEKKH-LGLVQRLLEQEH 263 (337)
T ss_dssp HSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHH----TTCCTTCCCGGGCCHHHHHHHTTC-HHHHHHHHTSTT
T ss_pred ccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHhhh-hHHHHHHHHhcC
Confidence 5 6676 8899999999998876554 346777887 789999999999999999999996 777776665 58
Q ss_pred cccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 153 ANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 153 a~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
++++.+|.+|+||||+|+... ..+++++|.+.|+++..
T Consensus 264 ~~vn~~d~~G~TpL~~A~~~g---~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 264 IEINDTDSDGKTALLLAVELK---LKKIAELLCKRGASTDC 301 (337)
T ss_dssp CCTTCBCTTSCBHHHHHHHTT---CHHHHHHHHTTSCSSTT
T ss_pred CcccCcCCCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCC
Confidence 999999999999999999766 56889999998887643
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2e-27 Score=206.46 Aligned_cols=159 Identities=16% Similarity=0.147 Sum_probs=135.5
Q ss_pred HHHHHHhcccc--ccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 4 LSKLLEIKKNL--IKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 4 v~~lL~~~~~~--~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
++.||++..+. .+..+.+|.||||+|+..|+.++++.|++.|+++ +.++. .|+||||+|+..|+.+++++|++.++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga 78 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNE-EGITALHNAICGANYSIVDFLITAGA 78 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 35566655432 3455677889999999999999999999999987 78887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCC-CCCCcHHHHH--HhcCCchHHHHHHhccCcccccc
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGD-AKGNTPLHVL--AAIRPNEFDVDLVRKTQANYDAV 158 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A--~~~~~~~~~~~lL~~~ga~~~~~ 158 (355)
++ +.+|..|+||||+|+.+|+.+++++|++ .|++++.+| .+|+||||+| +..++ .+++++|++.|++++.+
T Consensus 79 ~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~g~tpL~~A~a~~~~~-~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 79 NV-NSPDSHGWTPLHCAASCNDTVICMALVQ----HGAAIFATTLSDGATAFEKCDPYREGY-ADCATYLADVEQSMGLM 152 (229)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCSSTTCCTGGGCCTTSTTH-HHHHHHHHHHHHHTTTS
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcccccCCCCCCHHHHHHHHhcCh-HHHHHHHHHcCCCcccc
Confidence 98 8899999999999999999999999999 788999997 6999999999 88884 89999999999999888
Q ss_pred cCCCCcHHHHHh
Q 042924 159 NKQIVSVRHIFN 170 (355)
Q Consensus 159 n~~g~Tpl~~a~ 170 (355)
|..|.||++.+.
T Consensus 153 ~~~~~~~l~~~~ 164 (229)
T 2vge_A 153 NSGAVYALWDYS 164 (229)
T ss_dssp GGGEEEESSCBC
T ss_pred cCCchHHHHHHh
Confidence 888888887554
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=9.6e-26 Score=183.12 Aligned_cols=137 Identities=24% Similarity=0.314 Sum_probs=125.0
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++.+.+ ++ .|..|.||||+|+..|+.+++++|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 16 ~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 91 (153)
T 1awc_B 16 DEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTK-VDRTPLHMAASEGHANIVEVLLKHGA 91 (153)
T ss_dssp HHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcChHHHHHHHHHcCC
Confidence 456777776654 44 6899999999999999999999999999887 77787 89999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHH
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLV 148 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL 148 (355)
++ +.+|..|+||||+|+.+++.+++++|++ .|++++.+|.+|+||||+|+..|+ .+++++|
T Consensus 92 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~-~~i~~~L 152 (153)
T 1awc_B 92 DV-NAKDMLKMTALHWATEHNHQEVVELLIK----YGADVHTQSKFCKTAFDISIDNGN-EDLAEIL 152 (153)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCC-HHHHHHh
Confidence 98 8889999999999999999999999999 788999999999999999999996 8888776
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=6.9e-26 Score=201.72 Aligned_cols=159 Identities=19% Similarity=0.200 Sum_probs=126.3
Q ss_pred hHHHHHHHhcccc------cc----ccCCCCChHHHHHHHcCCHHHHHHhhccCCCccccccc-------------CCCc
Q 042924 2 AALSKLLEIKKNL------IK----ETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADK-------------DRKM 58 (355)
Q Consensus 2 ~~v~~lL~~~~~~------~~----~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-------------~~g~ 58 (355)
++++.|++.+.+. ++ .+|.+|+||||+|+..|+.+++++|+++|+++ +.++. ..|.
T Consensus 71 ~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~ 149 (273)
T 2pnn_A 71 DTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGE 149 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCB
T ss_pred HHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCC
Confidence 4566666664321 23 36779999999999999999999999999887 66653 1699
Q ss_pred hHHHHHHhcCCHHHHHHHhh---hCCccccccccCCchHHHHHHhcCC---------hhHHHHHHhcChhhhhhhc----
Q 042924 59 TALHLAAGKGDARIVEAIIS---KNPECYELVDNRGWNFLHYAVVSFR---------VEKLTNLLENNPLARSLIN---- 122 (355)
Q Consensus 59 tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~~~---------~~~~~~Ll~~~~~~~~~~n---- 122 (355)
||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..++ .++++.|++ .|+++|
T Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~----~ga~~n~~~~ 224 (273)
T 2pnn_A 150 LPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI----LGAKLHPTLK 224 (273)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH----HHHHHCTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH----hhhhcccccc
Confidence 99999999999999999999 88888 8899999999999999988 789999999 788886
Q ss_pred ---cCCCCCCcHHHHHHhcCCchHHHHHHhccCc-ccccccCCCCcHHH
Q 042924 123 ---EGDAKGNTPLHVLAAIRPNEFDVDLVRKTQA-NYDAVNKQIVSVRH 167 (355)
Q Consensus 123 ---~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga-~~~~~n~~g~Tpl~ 167 (355)
.+|.+|+||||+|+..|+ .+++++|+++|+ |+......+.+|-+
T Consensus 225 ~~~~~d~~g~TpL~~A~~~g~-~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 225 LEEITNRKGLTPLALAASSGK-IGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp GGGCCCTTSCCHHHHHHHTTC-HHHHHHHHHHHTC--------------
T ss_pred cccccCCCCCCHHHHHHHhCh-HHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 589999999999999996 999999999999 88887777776643
No 74
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=5.5e-26 Score=191.63 Aligned_cols=142 Identities=20% Similarity=0.151 Sum_probs=130.3
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++. +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.++. .|.||||+|+..|+.+++++|++.++
T Consensus 49 ~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (192)
T 2rfm_A 49 NAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDF-SGKTPLMWSIIFGYSEMSYFLLEHGA 125 (192)
T ss_dssp GGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 355666665 5668999999999999999999999999999999887 77887 99999999999999999999999999
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ 152 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (355)
++ +.+|..|+||||+|+..|+.++++.|++ .|++++.+|.+|+||||+|+..|+ .+++++|++.|
T Consensus 126 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~~ 190 (192)
T 2rfm_A 126 NV-NDRNLEGETPLIVASKYGRSEIVKKLLE----LGADISARDLTGLTAEASARIFGR-QEVIKIFTEVR 190 (192)
T ss_dssp CS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTC-HHHHHHHHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHhCc-HHHHHHHHhcc
Confidence 98 8899999999999999999999999999 788999999999999999999996 89999998764
No 75
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=2e-26 Score=193.53 Aligned_cols=154 Identities=14% Similarity=0.023 Sum_probs=132.1
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCH----HHHHHHhhhCCccccccccCCchHHHH
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDA----RIVEAIISKNPECYELVDNRGWNFLHY 97 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (355)
++++||.|++.|+.+.++.+++.+.+ ..++..|+||||+|+.+|+. +++++|++.|+++ +.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 67899999999999999999987643 34422799999999999985 5999999999999 8899999999999
Q ss_pred HHhcCC------hhHHHHHHhcChhhhhhhccCCCCCC-cHHHHHHhcCCc----hHHHHHHhc-cCcccccccCCCCcH
Q 042924 98 AVVSFR------VEKLTNLLENNPLARSLINEGDAKGN-TPLHVLAAIRPN----EFDVDLVRK-TQANYDAVNKQIVSV 165 (355)
Q Consensus 98 A~~~~~------~~~~~~Ll~~~~~~~~~~n~~d~~G~-T~Lh~A~~~~~~----~~~~~lL~~-~ga~~~~~n~~g~Tp 165 (355)
|+..++ .+++++|++ .|+++|.+|.+|+ ||||+|+..+.. ..++++|++ +|+|++.+|.+|+||
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~----~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~Tp 157 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLE----KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTA 157 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCH
T ss_pred HHHcCCcchhhHHHHHHHHHH----CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCH
Confidence 999987 467999999 8899999999999 999999996532 357789998 999999999999999
Q ss_pred HHHHhhCCCchHHHHHHHHHH
Q 042924 166 RHIFNYGYPELKEEIQKLSKD 186 (355)
Q Consensus 166 l~~a~~~~~~~~~~i~~~l~~ 186 (355)
||+|.... ..+++++|.+
T Consensus 158 L~~A~~~~---~~~~v~~L~~ 175 (186)
T 3t8k_A 158 LEFVKRCQ---KPIALKMMED 175 (186)
T ss_dssp HHHHHTTT---CHHHHHHHHH
T ss_pred HHHHHHcC---CHHHHHHHHH
Confidence 99999665 3455555554
No 76
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.3e-25 Score=174.05 Aligned_cols=126 Identities=35% Similarity=0.432 Sum_probs=117.6
Q ss_pred CCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHh
Q 042924 21 YGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVV 100 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 100 (355)
+|+||||+|++.|+.++++.|++.+.++ +..+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence 5899999999999999999999998887 77776 8999999999999999999999999988 8889999999999999
Q ss_pred cCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc
Q 042924 101 SFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN 154 (355)
Q Consensus 101 ~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~ 154 (355)
.++.+++++|++ .|.+++.+|.+|+||||+|+..++ .+++++|+++|+|
T Consensus 78 ~~~~~~~~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLE----AGADVNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHTCC
T ss_pred cChHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHcCc-HHHHHHHHHcCCC
Confidence 999999999999 678899999999999999999995 8999999999986
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=1.6e-24 Score=198.87 Aligned_cols=180 Identities=22% Similarity=0.207 Sum_probs=108.3
Q ss_pred HHHHHHHhccccccccCC-CCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 3 ALSKLLEIKKNLIKETDQ-YGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+|+.||+ +++++|.+|. .|+||||+||..|+.+++++|+++|+++ +.++. .+.+|+|.++..+..+.+..+++.++
T Consensus 40 ~V~~LL~-~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 4g8k_A 40 LVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKK-NGATPFILAAIAGSVKLLKLFLSKGA 116 (337)
T ss_dssp HHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHH-CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-hhhcc-CCCchhHHHHhcccchhhHHhhhccc
Confidence 4555554 4566777664 4788888888888888888888877766 44444 45555555555555555555555555
Q ss_pred ccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhc----------cCCCCCCcHHHHHHhcCCchHHHHHHh-c
Q 042924 82 ECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLIN----------EGDAKGNTPLHVLAAIRPNEFDVDLVR-K 150 (355)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n----------~~d~~G~T~Lh~A~~~~~~~~~~~lL~-~ 150 (355)
++ +..|..|+||||+|+..|+.++++.+++ .|++++ ..+..|.||||+|+..|+ .+++++|+ +
T Consensus 117 ~~-~~~d~~g~t~l~~A~~~~~~~~~~~ll~----~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~-~~~v~~LL~~ 190 (337)
T 4g8k_A 117 DV-NECDFYGFTAFMEAAVYGKVKALKFLYK----RGANVNLRRKTKEDQERLRKGGATALMDAAEKGH-VEVLKILLDE 190 (337)
T ss_dssp CT-TCBCTTCCBHHHHHHHTTCHHHHHHHHH----TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC-HHHHHHHHHH
T ss_pred hh-hhhccCCCCHHHHHHHcCcHHHHHHHHH----cCCCcchhhccccccccccCCCCcHHHHHHHCCC-HHHHHHHHhc
Confidence 54 5556666666666666666666666666 333332 234456666666666664 55666555 3
Q ss_pred cCcccccccCCCCcHHHHHh-hCCCchHHHHHHHHHHcCCCC
Q 042924 151 TQANYDAVNKQIVSVRHIFN-YGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 151 ~ga~~~~~n~~g~Tpl~~a~-~~~~~~~~~i~~~l~~~~~~~ 191 (355)
.|++++.+|..|.||++.+. .......+.+.++|.+.|.++
T Consensus 191 ~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~ 232 (337)
T 4g8k_A 191 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV 232 (337)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT
T ss_pred cCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC
Confidence 46666666666666666554 222222455666666665554
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1e-25 Score=199.01 Aligned_cols=167 Identities=15% Similarity=0.090 Sum_probs=138.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHhhc----cCCCccccccc---CCCchHHHHHH---hcCCHHHHHHHhhhCCcc-----
Q 042924 19 DQYGWTPIHYAAYYGNYGTVNLLLE----TDQSASNIADK---DRKMTALHLAA---GKGDARIVEAIISKNPEC----- 83 (355)
Q Consensus 19 d~~G~tpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~---~~g~tpLh~Aa---~~g~~~~v~~Ll~~~~~~----- 83 (355)
+..|+||||.|++.|+.+.++.|++ .+.+. +..+. ..|.||||+|+ ..|+.+++++|++.+++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 5789999999999999996655555 77776 44441 37999999999 779999999999987542
Q ss_pred -----ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCC--------------CCCCcHHHHHHhcCCchHH
Q 042924 84 -----YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGD--------------AKGNTPLHVLAAIRPNEFD 144 (355)
Q Consensus 84 -----~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d--------------~~G~T~Lh~A~~~~~~~~~ 144 (355)
.+..|..|+||||+|+..|+.++++.|++ .|++++.+| .+|+||||+|+..|+ .++
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~-~~~ 155 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVE----KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ-PHI 155 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC-HHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHh----CCCCcCccccccccCcccccccccCCCCHHHHHHHcCC-HHH
Confidence 24456699999999999999999999999 788999998 689999999999996 999
Q ss_pred HHHHhc---cCcccccccCCCCcHHHHHhhCCCc------hHHHHHHHHHHcCCCC
Q 042924 145 VDLVRK---TQANYDAVNKQIVSVRHIFNYGYPE------LKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 145 ~~lL~~---~ga~~~~~n~~g~Tpl~~a~~~~~~------~~~~i~~~l~~~~~~~ 191 (355)
+++|++ .|++++.+|.+|+||||+|+..... ...+++++|.+.|.++
T Consensus 156 v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999999 9999999999999999999943321 1146778888766544
No 79
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.6e-25 Score=178.25 Aligned_cols=128 Identities=23% Similarity=0.261 Sum_probs=111.5
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHH
Q 042924 17 ETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLH 96 (355)
Q Consensus 17 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (355)
.....|.||||+|+..|+.++++.|++++.++ +.++. .|.||||+|+..|+.+++++|++.++++ +.+|.+|+||||
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~ 85 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDE-YGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLH 85 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHH
Confidence 44567889999999999999999999998887 77776 8999999999999999999999998887 778899999999
Q ss_pred HHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC
Q 042924 97 YAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ 152 (355)
Q Consensus 97 ~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (355)
+|+..++.++++.|++ .|.+++.+|.+|+||||+|+..++ .+++++|++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~tpl~~A~~~~~-~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLK----HGADVNAQDKFGKTAFDISIGNGN-EDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHH----cCCCCcCcCCCCCCHHHHHHHCCC-HHHHHHHHHcC
Confidence 9999999999999998 678899999999999999999995 88888888765
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=6.3e-26 Score=198.25 Aligned_cols=159 Identities=15% Similarity=0.122 Sum_probs=129.5
Q ss_pred HHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcc
Q 042924 4 LSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPEC 83 (355)
Q Consensus 4 v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 83 (355)
++.++ .++..++. +..|.||||+|+..|+.++++.|++.++++ +.++. .|.||||+|+..|+.+++++|++.++++
T Consensus 21 ~~~ll-~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 96 (239)
T 1ycs_B 21 GSERI-AHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPND-EGITALHNAVCAGHTEIVKFLVQFGVNV 96 (239)
T ss_dssp ------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCT-TSCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred HHHHh-ccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 44444 45565664 478999999999999999999999999987 88887 9999999999999999999999999998
Q ss_pred ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCC-cHHHHH--HhcCCchHHHHHHhccCccccccc-
Q 042924 84 YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGN-TPLHVL--AAIRPNEFDVDLVRKTQANYDAVN- 159 (355)
Q Consensus 84 ~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~-T~Lh~A--~~~~~~~~~~~lL~~~ga~~~~~n- 159 (355)
+.+|.+|+||||+|+.+|+.+++++|++ .|++++.+|.+|. ||||+| +..|+ .+++++|++.|++++..|
T Consensus 97 -~~~d~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~t~l~~a~~~~~g~-~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 97 -NAADSDGWTPLHCAASCNNVQVCKFLVE----SGAAVFAMTYSDMQTAADKCEEMEEGY-TQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp -TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCSSSCCCHHHHCCSSSTTC-CCHHHHHHHHHHHTTTTGG
T ss_pred -CccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcceecCCCCcchHHHHHHhhhcc-HHHHHHHHHhhhccccccc
Confidence 8899999999999999999999999999 7899999998887 999999 67785 889999999999998774
Q ss_pred --------CCCCcHHHHHhhC
Q 042924 160 --------KQIVSVRHIFNYG 172 (355)
Q Consensus 160 --------~~g~Tpl~~a~~~ 172 (355)
..+.++.+++...
T Consensus 171 ~~~~al~d~~~~~~~eLa~~~ 191 (239)
T 1ycs_B 171 GVIYALWDYEPQNDDELPMKE 191 (239)
T ss_dssp GEEEESSCBCCSSTTBCCBCS
T ss_pred ceEEEEeccCCCCCCcccccC
Confidence 4566666665543
No 81
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=8.8e-27 Score=202.40 Aligned_cols=160 Identities=16% Similarity=0.085 Sum_probs=141.5
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCC
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNP 81 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~ 81 (355)
+.++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++.|+++ +.++. .|+||||+|+..|+.+++++|++.++
T Consensus 35 ~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 35 EVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDS-HGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45666665 45678999999999999999999999999999999987 88887 99999999999999999999999999
Q ss_pred ccccccc-cCCchHHHHH--HhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc--cc
Q 042924 82 ECYELVD-NRGWNFLHYA--VVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN--YD 156 (355)
Q Consensus 82 ~~~~~~d-~~g~t~Lh~A--~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~--~~ 156 (355)
++ +..| ..|+||||+| +..++.+++++|++ .|++++.+|..|.||+|.++.... .++|++.|++ ++
T Consensus 112 ~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~~l~~~~~~~~----~~~ll~~ga~~~~~ 182 (229)
T 2vge_A 112 AI-FATTLSDGATAFEKCDPYREGYADCATYLAD----VEQSMGLMNSGAVYALWDYSAEFG----DELSFREGESVTVL 182 (229)
T ss_dssp CT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH----HHHHTTTSGGGEEEESSCBCCSST----TBCCBCTTCEEEEE
T ss_pred Cc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHH----cCCCcccccCCchHHHHHHhhccc----cccCcccccccccc
Confidence 98 5555 6999999999 99999999999999 889999999999999997655542 2577888988 78
Q ss_pred cccCCCCcHHHHHhhCC
Q 042924 157 AVNKQIVSVRHIFNYGY 173 (355)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~ 173 (355)
.+|.+|+|||++|+..+
T Consensus 183 ~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 183 RRDGPEETDWWWAALHG 199 (229)
T ss_dssp ESSCTTCSSEEEEEETT
T ss_pred ccCCCcccHHHHHHHcC
Confidence 89999999999998543
No 82
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.4e-25 Score=178.64 Aligned_cols=127 Identities=23% Similarity=0.220 Sum_probs=98.3
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHH
Q 042924 17 ETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLH 96 (355)
Q Consensus 17 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (355)
.+|.+|+||||+|+..|+.++++.|++.+.++ +.++. .|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDH-AGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHH
Confidence 56788888888888888888888888887776 66676 7888888888888888888888888777 777888888888
Q ss_pred HHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhcc
Q 042924 97 YAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKT 151 (355)
Q Consensus 97 ~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ 151 (355)
+|+..++.++++.|++ .|++++.+|.+|+||||+|+..+. .+++++|.+.
T Consensus 82 ~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~-~~~l~~l~~~ 131 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLS----YGASRNAVNIFGLRPVDYTDDESM-KSLLLLPEKN 131 (137)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCGGGGCCCHHH-HHHHSCC---
T ss_pred HHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHhhccH-HHHHhhcccc
Confidence 8888888888888887 677788888888888888877663 5555554443
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=6e-25 Score=174.85 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=119.1
Q ss_pred cccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCC-C
Q 042924 50 NIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAK-G 128 (355)
Q Consensus 50 ~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~-G 128 (355)
+..+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+. ++.+++++|++ .|.+++.+|.+ |
T Consensus 6 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~----~g~~~~~~~~~~g 78 (136)
T 1d9s_A 6 HMLGG-SSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLL----HGAEPNCADPATL 78 (136)
T ss_dssp SCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHH----HTCCSSCCBTTTT
T ss_pred cCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHH----CCCCCCCcCCCCC
Confidence 66776 9999999999999999999999999988 8889999999999999 99999999999 78899999999 9
Q ss_pred CcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCC
Q 042924 129 NTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGR 189 (355)
Q Consensus 129 ~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 189 (355)
+||||+|+..++ .+++++|+++|++++.+|.+|+||+++|.... ..+++++|.+.|+
T Consensus 79 ~t~L~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 79 TRPVHDAAREGF-LDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG---HRDIARYLHAATG 135 (136)
T ss_dssp BCHHHHHHHHTC-HHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT---CHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC---CHHHHHHHHHcCC
Confidence 999999999996 99999999999999999999999999999665 4678888877664
No 84
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=9.2e-25 Score=199.84 Aligned_cols=160 Identities=17% Similarity=0.068 Sum_probs=136.0
Q ss_pred hHHHHHHHcCCHHHHHHhhccCCCcccc-cccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcC
Q 042924 24 TPIHYAAYYGNYGTVNLLLETDQSASNI-ADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSF 102 (355)
Q Consensus 24 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~-~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 102 (355)
+.+|.|+..+..++++.|++.+.++ +. ++. .|+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+.+|
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dv-n~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNL-NIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSV 175 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCS-CSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSS
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCc-ccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhc
Confidence 3458888889999999999999988 66 787 9999999999999999999999999998 889999999999999999
Q ss_pred C---hhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHh----cCCchHHHHHHhccCc----------------------
Q 042924 103 R---VEKLTNLLENNPLARSLINEGDAKGNTPLHVLAA----IRPNEFDVDLVRKTQA---------------------- 153 (355)
Q Consensus 103 ~---~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~----~~~~~~~~~lL~~~ga---------------------- 153 (355)
+ .++++.|++.. ..+++.+|.+|+||||+|+. .|+ .+++++|++.++
T Consensus 176 ~~~~~~~~~~ll~~~---~~~~~~~d~~g~tpLh~A~~~~~~~g~-~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~ 251 (327)
T 1sw6_A 176 NNYDSGTFEALLDYL---YPCLILEDSMNRTILHHIIITSGMTGC-SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251 (327)
T ss_dssp HHHHTTCHHHHHHHH---GGGGGEECTTCCCHHHHHHHHHTSTTC-HHHHHHHHHHHHHHHHHGGGCCEEEC--------
T ss_pred ccccHHHHHHHHHhh---hccccCCCCCCCCHHHHHHHHcccccc-HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc
Confidence 8 68888888832 26799999999999999999 775 888888877643
Q ss_pred -----------------------ccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 154 -----------------------NYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 154 -----------------------~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
+++.+|.+|+||||+|+... ..+++++|.+.|.++..
T Consensus 252 ~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g---~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 252 NDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLG---NISIVDALLDYGADPFI 311 (327)
T ss_dssp --------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHC---CHHHHHHHHHTTCCTTC
T ss_pred ccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHcCCCCcc
Confidence 57888999999999999765 46889999998887643
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.1e-25 Score=187.33 Aligned_cols=148 Identities=9% Similarity=0.073 Sum_probs=125.1
Q ss_pred HHHHHHHhccccccccC-CCCChHHHHHHHcCCH----HHHHHhhccCCCcccccccCCCchHHHHHHhcCC------HH
Q 042924 3 ALSKLLEIKKNLIKETD-QYGWTPIHYAAYYGNY----GTVNLLLETDQSASNIADKDRKMTALHLAAGKGD------AR 71 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~~d-~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~------~~ 71 (355)
.++.++... ++.+| ..|+||||+|+..|+. +++++|+++|+++ +.++. .|+||||+|+..|+ .+
T Consensus 21 ~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~-~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 21 DFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTK-EGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCT-TCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCC-CCCcHHHHHHHcCCcchhhHHH
Confidence 455555544 34555 7899999999999985 5999999999998 88887 99999999999987 68
Q ss_pred HHHHHhhhCCccccccccCCc-hHHHHHHhcCC-----hhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHH
Q 042924 72 IVEAIISKNPECYELVDNRGW-NFLHYAVVSFR-----VEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDV 145 (355)
Q Consensus 72 ~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~~~-----~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~ 145 (355)
++++|++.|+++ +.+|..|+ ||||+|+..+. .+++++|++. .|+++|.+|.+|+||||+|++.++ ..++
T Consensus 96 iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~---~gad~~~~d~~G~TpL~~A~~~~~-~~~v 170 (186)
T 3t8k_A 96 LCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ---SGLQLLIKDKWGLTALEFVKRCQK-PIAL 170 (186)
T ss_dssp HHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS---TTCCTTCCCTTSCCHHHHHHTTTC-HHHH
T ss_pred HHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh---cCCCCcccCCCCCCHHHHHHHcCC-HHHH
Confidence 899999999999 88999999 99999999554 4578888873 578999999999999999999996 8899
Q ss_pred HHHhccCcccccccC
Q 042924 146 DLVRKTQANYDAVNK 160 (355)
Q Consensus 146 ~lL~~~ga~~~~~n~ 160 (355)
++|.+...+.+.+++
T Consensus 171 ~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 171 KMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHHHHHHHTCCC-
T ss_pred HHHHHHHHHHhcccC
Confidence 999888776666653
No 86
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=192.91 Aligned_cols=144 Identities=22% Similarity=0.220 Sum_probs=129.9
Q ss_pred hHHHHHHHhccccccccCCCCChHHHHHH-----HcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHH
Q 042924 2 AALSKLLEIKKNLIKETDQYGWTPIHYAA-----YYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAI 76 (355)
Q Consensus 2 ~~v~~lL~~~~~~~~~~d~~G~tpLh~Aa-----~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 76 (355)
+.++.|++.+..+++.+|..|+||||+|+ ..++.++++.|++.+... +..+. .|.||||+|+..|+.+++++|
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~tpLh~A~~~g~~~~v~~L 202 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQ-AGQTALMLAVSHGRVDVVKAL 202 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTT-TCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHH
Confidence 45677777766689999999999999999 678899999999998766 66666 899999999999999999999
Q ss_pred hhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC
Q 042924 77 ISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ 152 (355)
Q Consensus 77 l~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (355)
++.++++ +.+|.+|+||||+|+..|+.+++++|++. .|++++.+|.+|+||||+|+..|+ .+++++|++++
T Consensus 203 l~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~---~gad~~~~d~~g~TpL~~A~~~g~-~~iv~~Ll~~~ 273 (276)
T 4hbd_A 203 LACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAV---PSCDISLTDRDGSTALMVALDAGQ-SEIASMLYSRM 273 (276)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTS---TTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHHC
T ss_pred HhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhc---CCCCCcCcCCCCCCHHHHHHHcCC-HHHHHHHHhcc
Confidence 9999998 88999999999999999999999999984 468999999999999999999996 88888888663
No 87
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=8.3e-25 Score=183.17 Aligned_cols=140 Identities=23% Similarity=0.188 Sum_probs=124.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccc-cCCchHHH
Q 042924 18 TDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVD-NRGWNFLH 96 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh 96 (355)
.|.+|.||||+|+..|+.++++.|++ +.++ +.++. .|+||||+|+..|+.+++++|++.++++ +.+| ..|+||||
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~ 115 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHH
Confidence 45689999999999999999999999 7776 78887 9999999999999999999999999998 6666 89999999
Q ss_pred HHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCch
Q 042924 97 YAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPEL 176 (355)
Q Consensus 97 ~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~ 176 (355)
+|+..|+.++++.|++ .|++++.+|.+|+||||+|++.++ . ..+.+|++++....
T Consensus 116 ~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~-~-----------------~~~~~~l~~a~~~~--- 170 (183)
T 3deo_A 116 MAAGYVRPEVVEALVE----LGADIEVEDERGLTALELAREILK-T-----------------TPKGNPMQFGRRIG--- 170 (183)
T ss_dssp HHHHTTCHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHHHH-T-----------------CCCCSHHHHHHHHH---
T ss_pred HHHhcCcHHHHHHHHH----cCCCCcCCCCCCCCHHHHHHHhcc-C-----------------cccccHHHHHHHcC---
Confidence 9999999999999999 788999999999999999998763 1 45689999998654
Q ss_pred HHHHHHHHHH
Q 042924 177 KEEIQKLSKD 186 (355)
Q Consensus 177 ~~~i~~~l~~ 186 (355)
..+++++|.+
T Consensus 171 ~~~i~~~L~~ 180 (183)
T 3deo_A 171 LEKVINVLEG 180 (183)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 6778887765
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3.1e-25 Score=191.44 Aligned_cols=141 Identities=21% Similarity=0.125 Sum_probs=108.5
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhh-CCccccccccCCch
Q 042924 15 IKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISK-NPECYELVDNRGWN 93 (355)
Q Consensus 15 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t 93 (355)
++..|.+|.||||+||..|+.++++.|++.+.++ +.++. .|+||||+|+..|+.+++++|++. +.++ +.+|..|+|
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~t 142 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDK-AGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDT 142 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCC
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCC
Confidence 4556778899999999999999999999988887 77776 899999999999999999999988 6666 788999999
Q ss_pred HHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCC
Q 042924 94 FLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIV 163 (355)
Q Consensus 94 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~ 163 (355)
|||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++ .++++.|++.|++.+..|.+|.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~-~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLA----KGARTDLRNIEKKLAFDMATNAAC-ASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHH----HTCCSCCCCTTSCCHHHHCCSHHH-HHHHC-----------------
T ss_pred HHHHHHHcCCHHHHHHHHH----cCCCCccccCCCCCHHHHhcchhH-HHHHHHHhccchhhhccchhhh
Confidence 9999999999999999998 788899999999999999998884 8888888888888887776654
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=9.2e-25 Score=173.90 Aligned_cols=126 Identities=25% Similarity=0.268 Sum_probs=112.9
Q ss_pred ccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCc
Q 042924 51 IADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNT 130 (355)
Q Consensus 51 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T 130 (355)
.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..++.+++++|++ .|.+++.+|.+|+|
T Consensus 5 ~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNH-RGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ----HKALVNTTGYQNDS 78 (137)
T ss_dssp CCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCGGGCC
T ss_pred CcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCcccCcCCCCCC
Confidence 4555 8999999999999999999999999988 8889999999999999999999999999 78899999999999
Q ss_pred HHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHH
Q 042924 131 PLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKD 186 (355)
Q Consensus 131 ~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~ 186 (355)
|||+|+..++ .+++++|+++|++++.+|.+|+||+++|.... ..++++++.+
T Consensus 79 ~L~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~---~~~~l~~l~~ 130 (137)
T 3c5r_A 79 PLHDAAKNGH-VDIVKLLLSYGASRNAVNIFGLRPVDYTDDES---MKSLLLLPEK 130 (137)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH---HHHHHSCC--
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc---HHHHHhhccc
Confidence 9999999996 89999999999999999999999999998433 4555555544
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=3.5e-24 Score=187.83 Aligned_cols=141 Identities=23% Similarity=0.185 Sum_probs=124.8
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccc-cCCchHHH
Q 042924 18 TDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVD-NRGWNFLH 96 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh 96 (355)
.+.+|.||||+|++.|+.++++.|++ +.++ +.++. .|+||||+|+..|+.+++++|++.++++ +.+| ..|+||||
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHH
Confidence 34679999999999999999999999 7776 88887 9999999999999999999999999998 6666 88999999
Q ss_pred HHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCch
Q 042924 97 YAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPEL 176 (355)
Q Consensus 97 ~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~ 176 (355)
+|+.+|+.+++++|++ .|++++.+|.+|+||||+|+..++ +..+.||+++|....
T Consensus 117 ~A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g--- 171 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVE----LGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIG--- 171 (244)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHH---
T ss_pred HHHHcCCHHHHHHHHH----CCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcC---
Confidence 9999999999999999 788999999999999999987553 256899999999654
Q ss_pred HHHHHHHHHHc
Q 042924 177 KEEIQKLSKDV 187 (355)
Q Consensus 177 ~~~i~~~l~~~ 187 (355)
..+++++|.+.
T Consensus 172 ~~~iv~~L~~~ 182 (244)
T 3ui2_A 172 LEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 66788888763
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=9.8e-24 Score=167.79 Aligned_cols=124 Identities=23% Similarity=0.177 Sum_probs=114.4
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHH
Q 042924 56 RKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVL 135 (355)
Q Consensus 56 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (355)
.|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.+++.++++.|++ .|.++|.+|.+|+||||+|
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLK----NGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHHH
Confidence 7889999999999999999999999988 8889999999999999999999999999 7889999999999999999
Q ss_pred HhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcC
Q 042924 136 AAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVG 188 (355)
Q Consensus 136 ~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~ 188 (355)
+..++ .+++++|+++|++++.+|.+|+||+++|.... ..+++++|.+.|
T Consensus 88 ~~~~~-~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~---~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGH-LEIAEVLLKHGADVNAQDKFGKTAFDISIGNG---NEDLAEILQKLN 136 (136)
T ss_dssp HHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHHHHHHHC-
T ss_pred HHcCC-HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC---CHHHHHHHHHcC
Confidence 99996 99999999999999999999999999999765 457777777643
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.3e-23 Score=161.71 Aligned_cols=125 Identities=29% Similarity=0.318 Sum_probs=116.2
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHH
Q 042924 56 RKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVL 135 (355)
Q Consensus 56 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (355)
+|+||||.|+..|+.+++++|++.++++ +..|..|+||||+|+..++.+++++|++ .|.+++.+|..|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHH----cCCCCcccCCCCCcHHHHH
Confidence 4899999999999999999999999988 7889999999999999999999999999 6789999999999999999
Q ss_pred HhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCC
Q 042924 136 AAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGR 189 (355)
Q Consensus 136 ~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 189 (355)
+..++ .+++++|+++|++++.+|.+|.||+++|.... ..+++++|.+.|+
T Consensus 76 ~~~~~-~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~---~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 76 ARNGH-LEVVKLLLEAGADVNAKDKNGRTPLHLAARNG---HLEVVKLLLEAGA 125 (126)
T ss_dssp HHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHHHHHHHHTC
T ss_pred HHcCh-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC---cHHHHHHHHHcCC
Confidence 99995 89999999999999999999999999999765 5678888887765
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=3e-23 Score=161.97 Aligned_cols=108 Identities=21% Similarity=0.104 Sum_probs=53.8
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHH
Q 042924 56 RKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVL 135 (355)
Q Consensus 56 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (355)
.|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++.+++++|++ .|.++|.+|.+|+||||+|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLL----KGADINAPDKHHITPLLSA 80 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCTTSCCHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHHH
Confidence 3445555555555555555555544444 4444455555555555555555555554 3444555555555555555
Q ss_pred HhcCCchHHHHHHhccCcccccccCCCCcHHHHH
Q 042924 136 AAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIF 169 (355)
Q Consensus 136 ~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a 169 (355)
+..++ .+++++|+++|++++.+|.+|+||+++|
T Consensus 81 ~~~~~-~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 81 VYEGH-VSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 55553 4444555555555555555555555554
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=3.5e-23 Score=161.62 Aligned_cols=113 Identities=19% Similarity=0.125 Sum_probs=103.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHH
Q 042924 18 TDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHY 97 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (355)
.+..|.||||+|+..|+.++++.|++.+.++ +.++. .|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLE-GGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLS 79 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCT-TSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence 3578999999999999999999999999887 78887 9999999999999999999999999998 8899999999999
Q ss_pred HHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHh
Q 042924 98 AVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAA 137 (355)
Q Consensus 98 A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~ 137 (355)
|+..++.++++.|++ .|++++.+|.+|+||||+|..
T Consensus 80 A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLS----KGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999 788999999999999999943
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=2.8e-23 Score=187.61 Aligned_cols=139 Identities=20% Similarity=0.156 Sum_probs=120.3
Q ss_pred CCChHHHHHHHcCCHHHHHHhhccCCCcccc------cccCCCchHHHHHHhc---CCHHHHHHHhhhCCccccccccCC
Q 042924 21 YGWTPIHYAAYYGNYGTVNLLLETDQSASNI------ADKDRKMTALHLAAGK---GDARIVEAIISKNPECYELVDNRG 91 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~------~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g 91 (355)
.+.++||.|+..|+.+.++.|++.+.++ +. .+. .|.||||+|+.. |+.+++++|++.++++ +.+|.+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G 226 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 226 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCC
Confidence 3557899999999999999999999887 44 455 899999999987 8999999999999988 8889999
Q ss_pred chHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhh
Q 042924 92 WNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNY 171 (355)
Q Consensus 92 ~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~ 171 (355)
+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++ .+++++|++.|++ .|.||+|+|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~~~-~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHH-KECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH----TTCCCSCCCTTSCCHHHHHHHHTC-HHHHHHHHHHHHH------TTSSCCC----
T ss_pred CCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHhcCC------CCCChhHHHHh
Confidence 999999999999999999999 788999999999999999999996 8999999999886 58999999985
Q ss_pred CC
Q 042924 172 GY 173 (355)
Q Consensus 172 ~~ 173 (355)
..
T Consensus 296 ~g 297 (301)
T 2b0o_E 296 WV 297 (301)
T ss_dssp --
T ss_pred cC
Confidence 43
No 96
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2.6e-23 Score=169.40 Aligned_cols=131 Identities=14% Similarity=0.040 Sum_probs=115.8
Q ss_pred cccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCc-
Q 042924 52 ADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNT- 130 (355)
Q Consensus 52 ~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T- 130 (355)
.+. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+ +|+.+++++|++ .|.++|.+|.+|+|
T Consensus 8 ~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~----~g~~~~~~d~~g~tt 80 (156)
T 1bi7_B 8 SME-PSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLL----HGAEPNCADPATLTR 80 (156)
T ss_dssp --C-CSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHT----TTCCCCCCCTTTCCC
T ss_pred CCc-cchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHH----cCCCCCCcCCCCCcH
Confidence 344 8999999999999999999999999988 888999999999985 899999999999 78899999999999
Q ss_pred HHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 131 PLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 131 ~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|||+|+..|+ .+++++|+++|++++.+|.+|+||+|+|.... ..+++++|.+.|.++..
T Consensus 81 pL~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 81 PVHDAAREGF-LDTLVVLHRAGARLDVRDAWGRLPVDLAEELG---HRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHHHHHTC-HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT---CHHHHHHHSSCC-----
T ss_pred HHHHHHHCCC-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC---HHHHHHHHHHcCCCCCc
Confidence 9999999996 89999999999999999999999999999665 56889999988877643
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=2e-23 Score=174.68 Aligned_cols=135 Identities=18% Similarity=0.161 Sum_probs=116.0
Q ss_pred HHHcCCHHHHHHhhccCCCcc----------cccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHH
Q 042924 29 AAYYGNYGTVNLLLETDQSAS----------NIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYA 98 (355)
Q Consensus 29 Aa~~g~~~~v~~Ll~~~~~~~----------~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (355)
|++.|..+++++|++.+.... ...+. +|.||||+|+..|+.++++.|++ +.++ +.+|..|+||||+|
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A 83 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS-EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFV 83 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHH-HHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCC-CCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHH
Confidence 345566666777775432221 11233 78999999999999999999999 7777 88999999999999
Q ss_pred HhcCChhHHHHHHhcChhhhhhhccCC-CCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhh
Q 042924 99 VVSFRVEKLTNLLENNPLARSLINEGD-AKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNY 171 (355)
Q Consensus 99 ~~~~~~~~~~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~ 171 (355)
+.+|+.+++++|++ .|+++|.+| .+|+||||+|+..|+ .+++++|+++|++++.+|.+|+||+|+|..
T Consensus 84 ~~~~~~~~v~~Ll~----~ga~~~~~~~~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 84 AGLGSDKCVRLLAE----AGADLDHRDMRGGLTALHMAAGYVR-PEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCCCSSSSCCHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHH----cCCCCCcCCCCCCCCHHHHHHhcCc-HHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 99999999999999 788999998 899999999999996 899999999999999999999999999984
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=8.2e-24 Score=196.41 Aligned_cols=156 Identities=11% Similarity=0.013 Sum_probs=124.4
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHhhccCCCcc--cccccCCCchHHHHHHhcCCHHHHHHHhhhCCcc--ccccccCC
Q 042924 16 KETDQYGWTPIHYAAYYGNYGTVNLLLETDQSAS--NIADKDRKMTALHLAAGKGDARIVEAIISKNPEC--YELVDNRG 91 (355)
Q Consensus 16 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g 91 (355)
...+.++.||||+||+.|+.+++++|++.++... ...+. .|.||||+|+.+|+.+++++|++.+++. .+..+.+
T Consensus 86 ~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~- 163 (376)
T 2aja_A 86 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN- 163 (376)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-
T ss_pred HHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc-CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-
Confidence 3456677899999999999999999999887321 12333 6789999999999999999999999752 1233333
Q ss_pred chHHHHHHhcCChhHHHHHHhcChhhhhhhcc--CCCCCCcHHHHHH-hcCCchHHHHHHhccCcccccccCCCCcHHHH
Q 042924 92 WNFLHYAVVSFRVEKLTNLLENNPLARSLINE--GDAKGNTPLHVLA-AIRPNEFDVDLVRKTQANYDAVNKQIVSVRHI 168 (355)
Q Consensus 92 ~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~--~d~~G~T~Lh~A~-~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~ 168 (355)
+||||+|+.+|+.+++++|++ .|++++. +|.+|+||||+|+ ..|+ .+++++|++.|++ |.||++.
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~----~ga~~~~~~~d~~g~TpL~~Aa~~~G~-~eiv~~Ll~~ga~-------~~taL~~ 231 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCE----LAPTEATAMIQAENYYAFRWAAVGRGH-HNVINFLLDCPVM-------LAYAEIH 231 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH----SCGGGHHHHHHHHHHHHHHHHHSTTCC-HHHHHHHTTSHHH-------HHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHH----cCCccchhccCCCCCCHHHHHHHHCCC-HHHHHHHHhCCCc-------cchHHHH
Confidence 999999999999999999999 6677776 8889999999999 9996 9999999998753 8999999
Q ss_pred HhhCCCchHHHHHHHHHHcC
Q 042924 169 FNYGYPELKEEIQKLSKDVG 188 (355)
Q Consensus 169 a~~~~~~~~~~i~~~l~~~~ 188 (355)
|+..+ ..+++++|.+.|
T Consensus 232 Aa~~g---~~evv~lL~~~g 248 (376)
T 2aja_A 232 EFEYG---EKYVNPFIARHV 248 (376)
T ss_dssp TTTTT---TTTHHHHHHHHH
T ss_pred HHHCC---CHHHHHHHHhcC
Confidence 98654 234666666533
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=1.4e-22 Score=174.83 Aligned_cols=165 Identities=16% Similarity=0.058 Sum_probs=128.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHhhccCC--------------CcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCcc
Q 042924 18 TDQYGWTPIHYAAYYGNYGTVNLLLETDQ--------------SASNIADKDRKMTALHLAAGKGDARIVEAIISKNPEC 83 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~--------------~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 83 (355)
.|.++.++.+++.+.|+...+..+.+.+- ...+..+. .|.||||+|+..|+.++++.|++.+.++
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 99 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAE-SIDNPLHEAAKRGNLSWLRECLDNRVGV 99 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEE-EESCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhcccccc-ccccccccccccCcHHHHHHHHhCCCCc
Confidence 35667777787777777544433332110 00122333 7899999999999999999999999988
Q ss_pred ccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCC
Q 042924 84 YELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIV 163 (355)
Q Consensus 84 ~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~ 163 (355)
+.+|..|+||||+|+.+|+.++++.|++. .|.++|.+|.+|+||||+|+..|+ .+++++|+++|++++.+|.+|+
T Consensus 100 -~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~g~~~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~~~~~~~g~ 174 (222)
T 3ehr_A 100 -NGLDKAGSTALYWACHGGHKDIVEMLFTQ---PNIELNQQNKLGDTALHAAAWKGY-ADIVQLLLAKGARTDLRNIEKK 174 (222)
T ss_dssp -TCCCTTSCCHHHHHHHTTCHHHHHHHTTS---TTCCCCCCCTTSCCHHHHHHHHTC-HHHHHHHHHHTCCSCCCCTTSC
T ss_pred -cccCCCCCCHHHHHHHcCCHHHHHHHHcC---CCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCccccCCCC
Confidence 88899999999999999999999999993 278999999999999999999996 9999999999999999999999
Q ss_pred cHHHHHhhCCCchHHHHHHHHHHcCCCC
Q 042924 164 SVRHIFNYGYPELKEEIQKLSKDVGRGQ 191 (355)
Q Consensus 164 Tpl~~a~~~~~~~~~~i~~~l~~~~~~~ 191 (355)
||+++|.... ..++++.+.+.+..+
T Consensus 175 t~l~~A~~~~---~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 175 LAFDMATNAA---CASLLKKKQGTDAVR 199 (222)
T ss_dssp CHHHHCCSHH---HHHHHC---------
T ss_pred CHHHHhcchh---HHHHHHHHhccchhh
Confidence 9999998543 566777777655544
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=3.2e-22 Score=185.06 Aligned_cols=147 Identities=16% Similarity=0.095 Sum_probs=115.9
Q ss_pred cCCCCChHHHHHHHc-CCHHHHHHhhccCCCccccccc-CCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHH
Q 042924 18 TDQYGWTPIHYAAYY-GNYGTVNLLLETDQSASNIADK-DRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFL 95 (355)
Q Consensus 18 ~d~~G~tpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~-~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 95 (355)
.+..+.||||.|+.. |+.++++.|++.|+++ +..+. ..|.||||+|+..|+.+++++|++.++++ +.+|..|+|||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpL 272 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPL 272 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHH
Confidence 334567899999999 9999999999999988 66661 38999999999999999999999999998 88999999999
Q ss_pred HHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC---cccccccCCCCcHHHHHhh
Q 042924 96 HYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ---ANYDAVNKQIVSVRHIFNY 171 (355)
Q Consensus 96 h~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g---a~~~~~n~~g~Tpl~~a~~ 171 (355)
|+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++ .+++++|++.+ .+....+..+.|+++++..
T Consensus 273 h~A~~~g~~~~v~~LL~----~Gad~~~~d~~G~TpL~~A~~~g~-~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 273 HHATILGHTGLACLFLK----RGADLGARDSEGRDPLTIAMETAN-ADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHHC---------------------
T ss_pred HHHHHcCcHHHHHHHHH----CcCCCCCcCCCCCCHHHHHHHCCC-HHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999 789999999999999999999996 88999998665 4445667788899988874
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=5.7e-22 Score=191.43 Aligned_cols=139 Identities=19% Similarity=0.152 Sum_probs=116.0
Q ss_pred CCChHHHHHHHcCCHHHHHHhhccCCCccccc------ccCCCchHHHHHHh---cCCHHHHHHHhhhCCccccccccCC
Q 042924 21 YGWTPIHYAAYYGNYGTVNLLLETDQSASNIA------DKDRKMTALHLAAG---KGDARIVEAIISKNPECYELVDNRG 91 (355)
Q Consensus 21 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------~~~~g~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~g 91 (355)
...+.||.|+..|+.+.++.|++.|+++ +.. +. .|.||||+|+. .|+.+++++|++.|+++ +.+|.+|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g 207 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 207 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCC-SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSS
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCccccc-ccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCC
Confidence 3447899999999999999999999887 544 55 89999999966 89999999999999998 8899999
Q ss_pred chHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHH
Q 042924 92 WNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRH 167 (355)
Q Consensus 92 ~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~ 167 (355)
+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+ .+++++|+++|++++..+.+..+++.
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~-~~~~~~Ll~~ga~~~~~~~h~~~~~~ 278 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHH-KECEELLEQAQAGTFAFPLHVDYSWV 278 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHH----TCCCCSCCCTTCCCHHHHHHHTTC-HHHHHHHHHTCC--------------
T ss_pred CcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHHhCCCCCCCcceeecccc
Confidence 999999999999999999999 789999999999999999999996 99999999999999875444443333
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=4.1e-23 Score=180.96 Aligned_cols=140 Identities=16% Similarity=0.064 Sum_probs=121.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHH
Q 042924 20 QYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAV 99 (355)
Q Consensus 20 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (355)
..|.+++..++..|+.+.+..+...+. ..+. .|.||||+|+..|+.++++.|++ +.++ +.+|..|+||||+|+
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~----~~~~-~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~ 85 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAA----DVVS-EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVA 85 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCH----HHHH-HHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHH
T ss_pred CCCccHHHHHHHcCCCccccccccccc----cccc-CCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHH
Confidence 456677777777777766655554432 2233 78999999999999999999999 7777 889999999999999
Q ss_pred hcCChhHHHHHHhcChhhhhhhccCC-CCCCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhh
Q 042924 100 VSFRVEKLTNLLENNPLARSLINEGD-AKGNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNY 171 (355)
Q Consensus 100 ~~~~~~~~~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~ 171 (355)
.+|+.+++++|++ .|+++|.+| .+|+||||+|+..|+ .+++++|+++|++++.+|.+|.||+|+|..
T Consensus 86 ~~g~~~~v~~Ll~----~ga~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 86 GLGSDKCVRLLAE----AGADLDHRDMRGGLTALHMAAGYVR-PEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHTCHHHHHHHHH----TTCCTTCCCSSSCCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HCCCHHHHHHHHH----cCCCCCcCCCCCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 9999999999999 788999998 889999999999996 899999999999999999999999999983
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=7.4e-21 Score=169.79 Aligned_cols=170 Identities=17% Similarity=0.137 Sum_probs=138.5
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHhhccCC-------Ccc-c-------cc-----cc---------CCCchHHHHHHhc
Q 042924 17 ETDQYGWTPIHYAAYYGNYGTVNLLLETDQ-------SAS-N-------IA-----DK---------DRKMTALHLAAGK 67 (355)
Q Consensus 17 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~-------~~~-~-------~~-----~~---------~~g~tpLh~Aa~~ 67 (355)
..|..+.++++.+...|+..+.+.+-..-+ ... . .+ .. ....++||.|+..
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~ 140 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKT 140 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhh
Confidence 367788899999999999766555532111 110 0 00 00 0224689999999
Q ss_pred CCHHHHHHHhhhCCccc-----cccccCCchHHHHHHhc---CChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcC
Q 042924 68 GDARIVEAIISKNPECY-----ELVDNRGWNFLHYAVVS---FRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIR 139 (355)
Q Consensus 68 g~~~~v~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~---~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~ 139 (355)
|+.+.++.+++.+++.. +..|..|+||||+|+.. ++.+++++|++ .|+++|.+|.+|+||||+|+..|
T Consensus 141 ~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~----~ga~in~~d~~g~TpLh~A~~~g 216 (278)
T 1dcq_A 141 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ----NSGNLDKQTGKGSTALHYCCLTD 216 (278)
T ss_dssp TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH----HCSCTTCCCTTCCCHHHHHHHTT
T ss_pred cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH----CCCCccccCCCCCCHHHHHHHcC
Confidence 99999999999999863 44588999999999999 89999999999 78999999999999999999999
Q ss_pred CchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCCC
Q 042924 140 PNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYSD 194 (355)
Q Consensus 140 ~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~~ 194 (355)
+ .+++++|+++|+|++.+|.+|+||||+|.... ..+++++|.+.|.++...
T Consensus 217 ~-~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~---~~~~v~~Ll~~ga~~~~~ 267 (278)
T 1dcq_A 217 N-AECLKLLLRGKASIEIANESGETPLDIAKRLK---HEHCEELLTQALSGRFNS 267 (278)
T ss_dssp C-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHHHHHHHHHTTCCCS
T ss_pred C-HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC---CHHHHHHHHHcCCCCCCc
Confidence 6 89999999999999999999999999999765 568889999877766543
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1.8e-21 Score=175.72 Aligned_cols=124 Identities=16% Similarity=0.075 Sum_probs=105.1
Q ss_pred HHHHHHHhccccccc------cCCCCChHHHHHHHc---CCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHH
Q 042924 3 ALSKLLEIKKNLIKE------TDQYGWTPIHYAAYY---GNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIV 73 (355)
Q Consensus 3 ~v~~lL~~~~~~~~~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v 73 (355)
.+++++.. +.+++. .|.+|+||||+|+.. |+.+++++|++.|+++ +.++. .|+||||+|+..|+.+++
T Consensus 166 ~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~-~G~TpLh~A~~~g~~~~v 242 (301)
T 2b0o_E 166 SVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAA-DGNTALHYAALYNQPDCL 242 (301)
T ss_dssp HHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCT-TCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCC-CCCCHHHHHHHcCCHHHH
Confidence 46666654 455666 689999999999997 8999999999999987 88887 999999999999999999
Q ss_pred HHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCC
Q 042924 74 EAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRP 140 (355)
Q Consensus 74 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~ 140 (355)
++|++.++++ +.+|.+|+||||+|+..++.+++++|++ .|++ .|+||||+|+..|+
T Consensus 243 ~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~----~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 243 KLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ----AQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHH----HHHH------TTSSCCC-------
T ss_pred HHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----hcCC------CCCChhHHHHhcCC
Confidence 9999999998 8899999999999999999999999999 5554 68999999999885
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.9e-21 Score=149.79 Aligned_cols=104 Identities=26% Similarity=0.225 Sum_probs=51.1
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHH
Q 042924 56 RKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVL 135 (355)
Q Consensus 56 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (355)
+|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..++.+++++|++ .|.+++.+|.+|+||||+|
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA----KGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTT----TTCCTTCCCTTCCCTTHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH----cCCCCcccCCCCCCHHHHH
Confidence 4444444444444444444444444443 4444445555555555555555555544 3444555555555555555
Q ss_pred HhcCCchHHHHHHhccCcccccccCCCCcH
Q 042924 136 AAIRPNEFDVDLVRKTQANYDAVNKQIVSV 165 (355)
Q Consensus 136 ~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tp 165 (355)
+..++ .+++++|+++|++++.++..|.||
T Consensus 83 ~~~~~-~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGH-HEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTC-HHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCC-HHHHHHHHHcCCCCCcCCcccccc
Confidence 55553 455555555555555555555544
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=2.5e-21 Score=172.85 Aligned_cols=127 Identities=19% Similarity=0.231 Sum_probs=116.3
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcc-----cccccCCCchHHHHHHhc---CCHHHHHHHhhhCCccccccccCCch
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSAS-----NIADKDRKMTALHLAAGK---GDARIVEAIISKNPECYELVDNRGWN 93 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~-----~~~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t 93 (355)
..++||.|+..|+.+.++.+++.|.+.. +..+. .|.||||+|+.. |+.+++++|++.++++ +.+|.+|+|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHE-PDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSS-TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhcccccccc-CCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCC
Confidence 3579999999999999999999988752 23355 899999999999 8999999999999998 889999999
Q ss_pred HHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCccc
Q 042924 94 FLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQANY 155 (355)
Q Consensus 94 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~~ 155 (355)
|||+|+.+|+.++++.|++ .|++++.+|.+|+||||+|+..|+ .+++++|+++|++.
T Consensus 208 pLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLR----GKASIEIANESGETPLDIAKRLKH-EHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHH----cCCCCCCccCCCCCHHHHHHHcCC-HHHHHHHHHcCCCC
Confidence 9999999999999999999 789999999999999999999996 89999999998853
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=5.8e-21 Score=141.32 Aligned_cols=88 Identities=36% Similarity=0.496 Sum_probs=44.6
Q ss_pred CChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhc
Q 042924 22 GWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVS 101 (355)
Q Consensus 22 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (355)
|+||||+|+..|+.+++++|++.+.++ +.++. .|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 455555555555555555555555444 44444 4555555555555555555555555444 44455555555555555
Q ss_pred CChhHHHHHHh
Q 042924 102 FRVEKLTNLLE 112 (355)
Q Consensus 102 ~~~~~~~~Ll~ 112 (355)
|+.+++++|++
T Consensus 79 ~~~~~~~~Ll~ 89 (93)
T 1n0q_A 79 GHLEVVKLLLE 89 (93)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 55555555544
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=3.1e-21 Score=148.53 Aligned_cols=109 Identities=27% Similarity=0.235 Sum_probs=101.0
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHH
Q 042924 17 ETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLH 96 (355)
Q Consensus 17 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (355)
.+|++|+||||+|+..|+.++++.|++.+.++ +.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|+||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSK-DGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCS-SSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHH
Confidence 57899999999999999999999999999887 77887 9999999999999999999999999998 888999999999
Q ss_pred HHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHH
Q 042924 97 YAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPL 132 (355)
Q Consensus 97 ~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~L 132 (355)
+|+..++.++++.|++ .|+++|.++..|.||-
T Consensus 81 ~A~~~~~~~~~~~Ll~----~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDA----KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHT----TSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHH----cCCCCCcCCccccccc
Confidence 9999999999999999 7899999999999874
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=9.8e-21 Score=140.07 Aligned_cols=93 Identities=31% Similarity=0.362 Sum_probs=87.3
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHH
Q 042924 56 RKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVL 135 (355)
Q Consensus 56 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (355)
+|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.+++.+++++|++ .|++++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHH
Confidence 4889999999999999999999999998 8899999999999999999999999999 7889999999999999999
Q ss_pred HhcCCchHHHHHHhccCcc
Q 042924 136 AAIRPNEFDVDLVRKTQAN 154 (355)
Q Consensus 136 ~~~~~~~~~~~lL~~~ga~ 154 (355)
+..++ .+++++|+++|++
T Consensus 76 ~~~~~-~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 76 ARNGH-LEVVKLLLEAGAY 93 (93)
T ss_dssp HHTTC-HHHHHHHHHTTCC
T ss_pred HHcCC-HHHHHHHHHcCCC
Confidence 99996 9999999999985
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=1.4e-21 Score=181.29 Aligned_cols=144 Identities=14% Similarity=0.161 Sum_probs=116.9
Q ss_pred hHHHHHHHhccc--cccccCCCCChHHHHHHHcCCHHHHHHhhccCCCc--ccccccCCCchHHHHHHhcCCHHHHHHHh
Q 042924 2 AALSKLLEIKKN--LIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSA--SNIADKDRKMTALHLAAGKGDARIVEAII 77 (355)
Q Consensus 2 ~~v~~lL~~~~~--~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll 77 (355)
++++.|++.+.. ..+..|..|.||||+||+.|+.+++++|+++|++. .+..+. + .||||+|+..|+.+++++|+
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~-~-~TpLh~Aa~~G~~eiv~~Ll 183 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE-N-YHAFRLAAENGHLHVLNRLC 183 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH-H-HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC-C-CCHHHHHHHCCCHHHHHHHH
Confidence 345555554431 12345567899999999999999999999999753 133443 3 89999999999999999999
Q ss_pred hhCCccccc--cccCCchHHHHHH-hcCChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccCcc
Q 042924 78 SKNPECYEL--VDNRGWNFLHYAV-VSFRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQAN 154 (355)
Q Consensus 78 ~~~~~~~~~--~d~~g~t~Lh~A~-~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ga~ 154 (355)
+.++++ +. .|..|+||||+|+ .+|+.+++++|++ .|. +|+||||+|+..|+ .+++++|++.|++
T Consensus 184 ~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~----~ga-------~~~taL~~Aa~~g~-~evv~lL~~~ga~ 250 (376)
T 2aja_A 184 ELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLD----CPV-------MLAYAEIHEFEYGE-KYVNPFIARHVNR 250 (376)
T ss_dssp HSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT----SHH-------HHHHHHHCTTTTTT-TTHHHHHHHHHHH
T ss_pred HcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHh----CCC-------ccchHHHHHHHCCC-HHHHHHHHhcCcc
Confidence 999987 44 7899999999999 9999999999999 443 28999999999996 7799999999999
Q ss_pred cccccC
Q 042924 155 YDAVNK 160 (355)
Q Consensus 155 ~~~~n~ 160 (355)
++..+.
T Consensus 251 ~~~~~~ 256 (376)
T 2aja_A 251 LKEMHD 256 (376)
T ss_dssp HHHHHT
T ss_pred cccccH
Confidence 877654
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=1.6e-19 Score=174.21 Aligned_cols=128 Identities=19% Similarity=0.144 Sum_probs=114.2
Q ss_pred CchHHHHHHhcCCHHHHHHHhhhCCcccccc------ccCCchHHHHHHh---cCChhHHHHHHhcChhhhhhhccCCCC
Q 042924 57 KMTALHLAAGKGDARIVEAIISKNPECYELV------DNRGWNFLHYAVV---SFRVEKLTNLLENNPLARSLINEGDAK 127 (355)
Q Consensus 57 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~g~t~Lh~A~~---~~~~~~~~~Ll~~~~~~~~~~n~~d~~ 127 (355)
..+.||.|+..|+.+.++.|++.++++ +.. |..|+||||+|+. .|+.+++++|++ .|+++|.+|.+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~----~ga~vn~~d~~ 206 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ----NGGHLDAKAAD 206 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH----HSCCTTCCCSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH----cCCCCCccCCC
Confidence 347899999999999999999999987 555 8899999999966 899999999999 88999999999
Q ss_pred CCcHHHHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcCCCCCC
Q 042924 128 GNTPLHVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVGRGQYS 193 (355)
Q Consensus 128 G~T~Lh~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~~ 193 (355)
|+||||+|+..|+ .+++++|+++|+|++.+|.+|+||||+|.... ..+++++|.++|+++..
T Consensus 207 g~TpLh~A~~~g~-~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 207 GNTALHYAALYNQ-PDCLKLLLKGRALVGTVNEAGETALDIARKKH---HKECEELLEQAQAGTFA 268 (497)
T ss_dssp SCCHHHHHTTTTC-HHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTT---CHHHHHHHHHTCC----
T ss_pred CCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC---CHHHHHHHHHhCCCCCC
Confidence 9999999999996 99999999999999999999999999999765 56889999998877654
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=1.3e-19 Score=167.49 Aligned_cols=124 Identities=17% Similarity=0.105 Sum_probs=113.7
Q ss_pred CCchHHHHHHhc-CCHHHHHHHhhhCCccccccc--cCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCcHH
Q 042924 56 RKMTALHLAAGK-GDARIVEAIISKNPECYELVD--NRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNTPL 132 (355)
Q Consensus 56 ~g~tpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~L 132 (355)
.+.||||.|+.. |+.++++.|++.++++ +..| ..|+||||+|+..|+.+++++|++ .|+++|.+|.+|+|||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~----~Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQ----NGANVNQADSAGRGPL 272 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHH----cCCCCCCCCCCCCCHH
Confidence 456899999999 9999999999999998 6677 899999999999999999999999 7899999999999999
Q ss_pred HHHHhcCCchHHHHHHhccCcccccccCCCCcHHHHHhhCCCchHHHHHHHHHHcC
Q 042924 133 HVLAAIRPNEFDVDLVRKTQANYDAVNKQIVSVRHIFNYGYPELKEEIQKLSKDVG 188 (355)
Q Consensus 133 h~A~~~~~~~~~~~lL~~~ga~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~~ 188 (355)
|+|+..|+ .+++++|+++|++++.+|.+|.||||+|.... ..+++++|..++
T Consensus 273 h~A~~~g~-~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g---~~~iv~lLl~~~ 324 (368)
T 3jue_A 273 HHATILGH-TGLACLFLKRGADLGARDSEGRDPLTIAMETA---NADIVTLLRLAK 324 (368)
T ss_dssp HHHHHHTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---CHHHHHHHHHHH
T ss_pred HHHHHcCc-HHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC---CHHHHHHHHHcC
Confidence 99999996 89999999999999999999999999999765 456777777755
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=1.2e-18 Score=133.12 Aligned_cols=96 Identities=19% Similarity=0.152 Sum_probs=66.0
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCC
Q 042924 12 KNLIKETDQYGWTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRG 91 (355)
Q Consensus 12 ~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g 91 (355)
+......|.+|.||||+|+..|+.++++.|++.++++ +.++. .|.||||+|+..|+.+++++|++.++++ +.+|..|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g 90 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFG 90 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCC
Confidence 3445666777777777777777777777777777766 66665 7777777777777777777777777776 6677777
Q ss_pred chHHHHHHhcCChhHHHHH
Q 042924 92 WNFLHYAVVSFRVEKLTNL 110 (355)
Q Consensus 92 ~t~Lh~A~~~~~~~~~~~L 110 (355)
+||||+|+.+++.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 7777777777777776654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=2.3e-17 Score=125.87 Aligned_cols=91 Identities=21% Similarity=0.174 Sum_probs=76.9
Q ss_pred ccccCCCchHHHHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhcCChhHHHHHHhcChhhhhhhccCCCCCCc
Q 042924 51 IADKDRKMTALHLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVSFRVEKLTNLLENNPLARSLINEGDAKGNT 130 (355)
Q Consensus 51 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T 130 (355)
..+. +|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.+|+.+++++|++ .|++++.+|.+|+|
T Consensus 19 ~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 19 HMGS-DLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLE----AGADVXAQDKFGKT 92 (110)
T ss_dssp ---C-CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCC
T ss_pred ccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccccCCCc
Confidence 3444 8889999999999999999999988887 7788899999999999999999999998 67888899999999
Q ss_pred HHHHHHhcCCchHHHHHH
Q 042924 131 PLHVLAAIRPNEFDVDLV 148 (355)
Q Consensus 131 ~Lh~A~~~~~~~~~~~lL 148 (355)
|||+|+..++ .+++++|
T Consensus 93 pl~~A~~~~~-~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGN-EDLAEIL 109 (110)
T ss_dssp HHHHHHHHTC-HHHHHHH
T ss_pred HHHHHHHcCC-HHHHHHh
Confidence 9999999885 7777765
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=83.64 E-value=4.9 Score=35.80 Aligned_cols=51 Identities=20% Similarity=0.277 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHh----ccCCcc-ee-hhhHHHHHHHHHHHHHHHhhcc
Q 042924 304 WFTIFSMGAMVIAFVTGTYAM----LVPSLG-LA-IITCLIGLSFFLLVIWIVRLSI 354 (355)
Q Consensus 304 ~~~~~s~~~~~~af~~~~~~v----~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 354 (355)
.++.+|++.+..+|++|+|=+ +|...| +. .+++++.+++.+..+|+||++.
T Consensus 281 ~LTiit~IflP~T~IaGiyGMNf~~mPel~~~~gy~~~l~~m~~~~~~~~~~fkrk~ 337 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGMNFSYLPLANNPQGFWLVMALMVVIIMIFVYIFRRSG 337 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTCCCSCCTTSSCTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhhccCcCCCCCCccCchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 567788889999999999954 333322 22 2223333455556667777653
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=82.06 E-value=4.6 Score=36.40 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHh----ccCCcc-eehhh-HHHHHHHHHHHHHHHhhc
Q 042924 303 VWFTIFSMGAMVIAFVTGTYAM----LVPSLG-LAIIT-CLIGLSFFLLVIWIVRLS 353 (355)
Q Consensus 303 ~~~~~~s~~~~~~af~~~~~~v----~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 353 (355)
..++.+|++.+..+|++|+|=+ +|...| +.+.+ +++.++..+..+|+||++
T Consensus 304 k~LTiit~IflP~T~IaGiyGMNf~~mPel~~~~Gy~~~l~~m~~i~~~~~~~Fkrk 360 (363)
T 2iub_A 304 KVLTIIATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLAVMGVIAVIMVVYFKKK 360 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC--------------CHHHHHHHHHHHHHHHTTTTSC
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3567788899999999999943 344332 23322 333334555666777665
No 117
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=40.07 E-value=20 Score=19.19 Aligned_cols=22 Identities=14% Similarity=0.061 Sum_probs=14.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhcc
Q 042924 333 IITCLIGLSFFLLVIWIVRLSI 354 (355)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~ 354 (355)
|+..++++|...+..+|++.+-
T Consensus 7 iia~visGcivalF~hWL~~r~ 28 (30)
T 4b19_A 7 IIAPVISGCAIAFFSYWLSRRN 28 (30)
T ss_dssp STTTTHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHhcc
Confidence 4445666677777777777643
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=28.67 E-value=38 Score=19.29 Aligned_cols=17 Identities=29% Similarity=0.196 Sum_probs=11.5
Q ss_pred HHHHHHcCCHHHHHHhh
Q 042924 26 IHYAAYYGNYGTVNLLL 42 (355)
Q Consensus 26 Lh~Aa~~g~~~~v~~Ll 42 (355)
+..||+.|+.+.++.|=
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777777776653
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.37 E-value=1.8e+02 Score=22.90 Aligned_cols=107 Identities=14% Similarity=0.071 Sum_probs=66.0
Q ss_pred ChHHHHHHHcCCHHHHHHhhccCCCcccccccCCCchHH-HHHHhcCCHHHHHHHhhhCCccccccccCCchHHHHHHhc
Q 042924 23 WTPIHYAAYYGNYGTVNLLLETDQSASNIADKDRKMTAL-HLAAGKGDARIVEAIISKNPECYELVDNRGWNFLHYAVVS 101 (355)
Q Consensus 23 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL-h~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (355)
.+-+-.|...|+.+.+..+.+...+. .-+.-| ..|...|+.++++.-..+..+. .+ .+.+....
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~-------~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~------~~--L~~Ly~~t 73 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDS-------ITWERLIQEALAQGNASLAEMIYQTQHSF------DK--LSFLYLVT 73 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCH-------HHHHHHHHHHHHTTCHHHHHHHHHHTTCH------HH--HHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHcCChHHHHHHHHHhCCH------HH--HHHHHHHh
Confidence 45577899999988887776532111 112222 3456789999999888776555 11 23334445
Q ss_pred CChhHHHHHHhcChhhhhhhccCCCCCCcHHHHHHhcCCchHHHHHHhccC
Q 042924 102 FRVEKLTNLLENNPLARSLINEGDAKGNTPLHVLAAIRPNEFDVDLVRKTQ 152 (355)
Q Consensus 102 ~~~~~~~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (355)
|+.+-++.+.+. -....+-+.+.|.+-..|+..+++++|.+.|
T Consensus 74 g~~e~L~kla~i--------A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 74 GDVNKLSKMQNI--------AQTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp TCHHHHHHHHHH--------HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHH--------HHHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 665555555442 1122345667888888888888888887653
No 120
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=23.14 E-value=84 Score=16.25 Aligned_cols=20 Identities=20% Similarity=0.502 Sum_probs=11.5
Q ss_pred ehhhHHHHHHHHHHHHHHHh
Q 042924 332 AIITCLIGLSFFLLVIWIVR 351 (355)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~ 351 (355)
+|+-.+.-+.|+.+.+|++.
T Consensus 8 viaglvalltflafgfwlfk 27 (32)
T 2lx0_A 8 VIAGLVALLTFLAFGFWLFK 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444566677777664
Done!