Query 042931
Match_columns 471
No_of_seqs 560 out of 5258
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-36 4.2E-41 300.2 15.1 249 63-324 9-268 (313)
2 4eco_A Uncharacterized protein 100.0 3E-34 1E-38 309.7 10.8 227 82-322 59-398 (636)
3 4fcg_A Uncharacterized protein 100.0 5.4E-33 1.8E-37 276.0 15.1 252 63-325 30-302 (328)
4 3rgz_A Protein brassinosteroid 100.0 2.2E-33 7.4E-38 309.4 13.2 239 79-323 29-317 (768)
5 4ecn_A Leucine-rich repeat pro 100.0 2.5E-32 8.7E-37 301.7 13.4 216 95-322 315-640 (876)
6 3rgz_A Protein brassinosteroid 100.0 2E-29 6.7E-34 277.8 18.3 215 103-324 418-704 (768)
7 1ogq_A PGIP-2, polygalacturona 100.0 6.9E-29 2.3E-33 244.7 13.5 190 128-319 97-287 (313)
8 2o6q_A Variable lymphocyte rec 100.0 2.3E-27 7.8E-32 228.7 23.0 220 89-317 2-222 (270)
9 2z66_A Variable lymphocyte rec 99.9 4.3E-27 1.5E-31 230.6 16.9 228 90-324 5-247 (306)
10 1ozn_A Reticulon 4 receptor; N 99.9 1.1E-25 3.6E-30 218.5 21.2 190 128-317 52-242 (285)
11 3oja_A Leucine-rich immune mol 99.9 1.7E-28 6E-33 256.4 0.3 199 104-322 35-235 (487)
12 3v47_A TOLL-like receptor 5B a 99.9 7E-26 2.4E-30 233.9 19.2 194 128-321 75-344 (455)
13 1ozn_A Reticulon 4 receptor; N 99.9 2.1E-25 7.2E-30 216.4 20.8 195 128-322 28-223 (285)
14 3m19_A Variable lymphocyte rec 99.9 2.1E-25 7.2E-30 212.6 19.8 176 137-315 19-194 (251)
15 4fcg_A Uncharacterized protein 99.9 1.4E-25 4.8E-30 222.5 19.0 183 128-313 123-314 (328)
16 3rfs_A Internalin B, repeat mo 99.9 5.5E-25 1.9E-29 212.2 19.2 188 128-324 59-246 (272)
17 3zyi_A Leucine-rich repeat-con 99.9 1E-24 3.5E-29 225.6 20.7 192 128-321 95-287 (452)
18 3oja_B Anopheles plasmodium-re 99.9 1.1E-24 3.6E-29 233.4 17.6 115 128-242 71-185 (597)
19 2z62_A TOLL-like receptor 4, v 99.9 2.4E-24 8.2E-29 207.9 18.2 189 128-317 48-241 (276)
20 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.8E-28 203.1 20.9 187 128-318 37-223 (272)
21 2o6s_A Variable lymphocyte rec 99.9 4.1E-24 1.4E-28 197.6 17.1 185 90-300 5-189 (208)
22 4eco_A Uncharacterized protein 99.9 1.2E-25 4E-30 242.5 7.6 190 128-321 202-423 (636)
23 2ft3_A Biglycan; proteoglycan, 99.9 8.7E-24 3E-28 209.6 20.3 218 91-321 32-261 (332)
24 3zyj_A Leucine-rich repeat-con 99.9 9E-24 3.1E-28 217.7 19.9 192 128-321 84-276 (440)
25 3v47_A TOLL-like receptor 5B a 99.9 5.3E-24 1.8E-28 219.8 18.2 194 128-321 99-392 (455)
26 1xku_A Decorin; proteoglycan, 99.9 1.5E-23 5.3E-28 207.5 20.4 219 90-321 29-260 (330)
27 3o6n_A APL1; leucine-rich repe 99.9 6.2E-24 2.1E-28 215.3 16.8 189 128-319 65-290 (390)
28 4ecn_A Leucine-rich repeat pro 99.9 4.8E-25 1.6E-29 243.7 8.7 190 132-325 323-619 (876)
29 2z80_A TOLL-like receptor 2, v 99.9 1.6E-24 5.5E-29 216.7 10.6 213 88-320 26-242 (353)
30 1wwl_A Monocyte differentiatio 99.9 2.6E-24 9E-29 211.7 11.0 182 130-315 93-289 (312)
31 2z66_A Variable lymphocyte rec 99.9 7.4E-24 2.5E-28 207.5 14.1 188 128-316 74-264 (306)
32 2id5_A Lingo-1, leucine rich r 99.9 1.9E-23 6.4E-28 217.3 17.8 187 128-314 52-238 (477)
33 1p9a_G Platelet glycoprotein I 99.9 1.2E-22 4.1E-27 197.9 22.1 181 131-315 30-210 (290)
34 2z81_A CD282 antigen, TOLL-lik 99.9 3.7E-24 1.3E-28 226.3 11.3 182 132-314 26-210 (549)
35 3zyi_A Leucine-rich repeat-con 99.9 6.5E-23 2.2E-27 212.1 19.8 191 132-324 75-266 (452)
36 1p9a_G Platelet glycoprotein I 99.9 7.2E-23 2.5E-27 199.4 18.9 189 128-323 6-194 (290)
37 2o6q_A Variable lymphocyte rec 99.9 2.2E-22 7.6E-27 193.7 22.0 187 132-321 16-202 (270)
38 2z62_A TOLL-like receptor 4, v 99.9 3.2E-23 1.1E-27 200.0 16.1 189 132-321 28-221 (276)
39 1wwl_A Monocyte differentiatio 99.9 5E-24 1.7E-28 209.7 10.5 180 129-314 118-310 (312)
40 3vq2_A TLR4, TOLL-like recepto 99.9 1.9E-23 6.4E-28 223.6 15.0 196 127-324 345-544 (606)
41 3m19_A Variable lymphocyte rec 99.9 3E-22 1E-26 190.7 21.7 193 90-292 3-195 (251)
42 3t6q_A CD180 antigen; protein- 99.9 5.1E-23 1.7E-27 220.3 17.1 197 128-324 321-524 (606)
43 3t6q_A CD180 antigen; protein- 99.9 6.1E-23 2.1E-27 219.6 17.4 197 128-324 297-500 (606)
44 3zyj_A Leucine-rich repeat-con 99.9 1.5E-22 5E-27 208.7 19.6 192 131-324 63-255 (440)
45 1ziw_A TOLL-like receptor 3; i 99.9 1.4E-22 4.8E-27 219.8 19.5 214 103-322 25-294 (680)
46 3j0a_A TOLL-like receptor 5; m 99.9 1.2E-22 4.1E-27 225.9 19.3 191 128-318 69-356 (844)
47 2ft3_A Biglycan; proteoglycan, 99.9 3.2E-22 1.1E-26 198.3 19.9 186 131-323 53-240 (332)
48 3oja_B Anopheles plasmodium-re 99.9 2.3E-22 8E-27 215.2 19.6 189 128-320 95-320 (597)
49 2z7x_B TOLL-like receptor 1, v 99.9 1.4E-22 4.8E-27 212.9 17.0 71 249-319 321-393 (520)
50 3cvr_A Invasion plasmid antige 99.9 9.7E-23 3.3E-27 215.7 15.3 202 88-324 39-254 (571)
51 2z63_A TOLL-like receptor 4, v 99.9 1.1E-22 3.9E-27 215.6 15.7 189 129-318 344-536 (570)
52 3vq2_A TLR4, TOLL-like recepto 99.9 5.3E-23 1.8E-27 220.1 13.2 188 128-317 372-562 (606)
53 2o6s_A Variable lymphocyte rec 99.9 3.9E-22 1.3E-26 184.2 17.1 181 135-325 10-190 (208)
54 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2.1E-22 7.3E-27 213.9 17.2 106 103-217 52-159 (562)
55 1xku_A Decorin; proteoglycan, 99.9 9.4E-22 3.2E-26 194.7 20.4 187 131-323 51-239 (330)
56 2id5_A Lingo-1, leucine rich r 99.9 1.8E-22 6.2E-27 209.9 15.4 190 128-317 76-313 (477)
57 4glp_A Monocyte differentiatio 99.9 7.1E-23 2.4E-27 201.2 11.5 180 131-314 90-286 (310)
58 2z80_A TOLL-like receptor 2, v 99.9 2.7E-23 9.1E-28 207.9 8.5 210 103-319 52-295 (353)
59 3o6n_A APL1; leucine-rich repe 99.9 1.2E-21 4.2E-26 198.3 20.2 188 128-320 89-314 (390)
60 3j0a_A TOLL-like receptor 5; m 99.9 2.4E-22 8.3E-27 223.5 16.3 191 131-321 23-225 (844)
61 2xwt_C Thyrotropin receptor; s 99.9 1.9E-22 6.4E-27 190.5 13.1 183 132-318 31-222 (239)
62 3oja_A Leucine-rich immune mol 99.9 7.5E-23 2.6E-27 213.7 10.8 201 103-322 58-260 (487)
63 4glp_A Monocyte differentiatio 99.9 2.5E-22 8.5E-27 197.3 13.0 180 129-314 114-308 (310)
64 1ziw_A TOLL-like receptor 3; i 99.9 1.4E-21 4.9E-26 212.0 19.7 167 132-298 25-193 (680)
65 2z7x_B TOLL-like receptor 1, v 99.9 5.1E-22 1.7E-26 208.6 15.1 182 132-319 247-462 (520)
66 3e6j_A Variable lymphocyte rec 99.9 3.1E-21 1E-25 181.3 18.2 159 87-265 14-172 (229)
67 2xwt_C Thyrotropin receptor; s 99.9 1.5E-21 5.1E-26 184.3 14.9 178 127-310 50-236 (239)
68 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.1E-21 3.7E-26 208.4 15.2 161 153-317 350-514 (562)
69 1h6u_A Internalin H; cell adhe 99.9 4.3E-21 1.5E-25 188.5 18.0 173 128-314 59-231 (308)
70 3o53_A Protein LRIM1, AGAP0063 99.9 3.4E-22 1.2E-26 197.0 8.3 179 128-320 54-233 (317)
71 2z63_A TOLL-like receptor 4, v 99.9 1.3E-21 4.5E-26 207.4 12.0 192 129-323 322-517 (570)
72 2z81_A CD282 antigen, TOLL-lik 99.8 9E-22 3.1E-26 207.9 9.5 223 91-320 3-243 (549)
73 3bz5_A Internalin-J, INLJ; leu 99.8 4.6E-20 1.6E-24 191.0 21.8 167 128-314 81-247 (457)
74 2v70_A SLIT-2, SLIT homolog 2 99.8 1.8E-20 6.2E-25 174.9 15.7 155 135-292 14-169 (220)
75 1h6u_A Internalin H; cell adhe 99.8 3.2E-20 1.1E-24 182.2 18.0 176 128-317 37-212 (308)
76 2v70_A SLIT-2, SLIT homolog 2 99.8 3.1E-20 1.1E-24 173.3 16.5 135 133-267 33-168 (220)
77 3bz5_A Internalin-J, INLJ; leu 99.8 1.1E-19 3.7E-24 188.2 21.7 175 126-317 100-281 (457)
78 4g8a_A TOLL-like receptor 4; l 99.8 8.5E-21 2.9E-25 203.1 13.5 182 132-314 52-238 (635)
79 2xot_A Amphoterin-induced prot 99.8 2.7E-20 9.1E-25 186.9 15.5 156 158-313 41-202 (361)
80 2v9t_B SLIT homolog 2 protein 99.8 5.7E-20 1.9E-24 171.5 15.7 152 135-289 14-165 (220)
81 2v9t_B SLIT homolog 2 protein 99.8 8.4E-20 2.9E-24 170.4 16.8 135 132-266 32-166 (220)
82 1h6t_A Internalin B; cell adhe 99.8 4.9E-20 1.7E-24 179.4 15.8 174 128-315 42-215 (291)
83 1o6v_A Internalin A; bacterial 99.8 7.3E-20 2.5E-24 189.9 17.9 176 128-317 195-370 (466)
84 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.4E-24 170.2 17.9 151 135-289 22-172 (229)
85 1o6v_A Internalin A; bacterial 99.8 1.1E-19 3.7E-24 188.6 19.0 174 128-315 173-346 (466)
86 4fmz_A Internalin; leucine ric 99.8 7.5E-20 2.6E-24 182.0 16.7 178 128-317 151-328 (347)
87 4fmz_A Internalin; leucine ric 99.8 1.5E-19 5.2E-24 179.8 18.3 184 128-324 128-311 (347)
88 2ast_B S-phase kinase-associat 99.8 8.5E-22 2.9E-26 195.1 1.9 182 129-310 90-282 (336)
89 4b8c_D Glucose-repressible alc 99.8 2.2E-21 7.6E-26 211.8 3.7 221 66-294 138-359 (727)
90 4g8a_A TOLL-like receptor 4; l 99.8 1.2E-19 4E-24 194.3 16.6 170 147-318 45-219 (635)
91 2xot_A Amphoterin-induced prot 99.8 8.1E-20 2.8E-24 183.3 13.8 159 132-290 39-203 (361)
92 1m9s_A Internalin B; cell inva 99.8 1.9E-19 6.7E-24 192.2 16.9 173 129-315 40-212 (605)
93 4ezg_A Putative uncharacterize 99.8 1E-19 3.5E-24 166.6 12.7 153 154-313 42-194 (197)
94 4ezg_A Putative uncharacterize 99.8 7.5E-20 2.6E-24 167.6 11.7 156 128-290 40-195 (197)
95 2ca6_A RAN GTPase-activating p 99.8 1.8E-21 6.2E-26 196.9 0.3 188 129-316 91-319 (386)
96 3cvr_A Invasion plasmid antige 99.8 5.4E-19 1.9E-23 187.0 18.8 164 133-324 60-230 (571)
97 2ca6_A RAN GTPase-activating p 99.8 3.1E-21 1.1E-25 195.1 0.5 193 128-320 56-298 (386)
98 4ay9_X Follicle-stimulating ho 99.8 3.9E-19 1.3E-23 177.6 13.9 183 132-315 30-217 (350)
99 2ast_B S-phase kinase-associat 99.8 1.6E-20 5.6E-25 185.8 3.1 212 90-311 35-258 (336)
100 3o53_A Protein LRIM1, AGAP0063 99.8 4E-20 1.4E-24 182.2 4.4 202 103-323 58-261 (317)
101 1m9s_A Internalin B; cell inva 99.8 2.2E-18 7.4E-23 184.1 17.3 156 128-295 61-216 (605)
102 4asz_A BDNF/NT-3 growth factor 99.8 6.2E-19 2.1E-23 172.1 11.7 109 360-471 13-137 (299)
103 1xeu_A Internalin C; cellular 99.8 2.4E-19 8.3E-24 171.9 8.7 170 131-315 18-187 (263)
104 1h6t_A Internalin B; cell adhe 99.8 3.1E-18 1.1E-22 166.6 16.5 153 128-292 64-216 (291)
105 1dce_A Protein (RAB geranylger 99.8 1.6E-21 5.3E-26 207.0 -7.7 184 127-317 344-550 (567)
106 1jl5_A Outer protein YOPM; leu 99.8 2.6E-18 8.9E-23 177.7 16.6 175 128-324 191-383 (454)
107 1jl5_A Outer protein YOPM; leu 99.8 6.8E-18 2.3E-22 174.5 19.3 161 132-314 131-291 (454)
108 4aoj_A High affinity nerve gro 99.8 9.6E-19 3.3E-23 173.0 11.8 109 360-471 41-167 (329)
109 3g06_A SSPH2 (leucine-rich rep 99.8 2.7E-18 9.1E-23 183.8 15.4 37 130-170 79-115 (622)
110 3goz_A Leucine-rich repeat-con 99.8 7.2E-20 2.5E-24 183.7 1.8 193 129-321 19-246 (362)
111 1w8a_A SLIT protein; signaling 99.8 5.4E-18 1.9E-22 154.6 13.8 130 137-269 13-143 (192)
112 4gt4_A Tyrosine-protein kinase 99.8 8.9E-19 3E-23 171.7 9.0 109 361-471 27-154 (308)
113 4b8c_D Glucose-repressible alc 99.8 2.1E-19 7.2E-24 196.2 5.0 186 132-323 173-364 (727)
114 3g06_A SSPH2 (leucine-rich rep 99.8 1.1E-17 3.8E-22 178.9 17.8 87 228-323 221-307 (622)
115 1w8a_A SLIT protein; signaling 99.8 8.4E-18 2.9E-22 153.3 14.0 132 159-293 11-143 (192)
116 2ell_A Acidic leucine-rich nuc 99.7 8.8E-18 3E-22 149.5 11.3 133 131-265 23-160 (168)
117 1xeu_A Internalin C; cellular 99.7 1.4E-17 5E-22 159.5 12.6 152 128-292 37-188 (263)
118 2o6r_A Variable lymphocyte rec 99.7 5.7E-17 1.9E-21 145.5 15.1 111 132-242 28-138 (177)
119 3goz_A Leucine-rich repeat-con 99.7 6.5E-19 2.2E-23 176.7 2.1 180 136-315 2-211 (362)
120 2ell_A Acidic leucine-rich nuc 99.7 1.9E-17 6.4E-22 147.3 11.2 133 155-289 23-160 (168)
121 2je0_A Acidic leucine-rich nuc 99.7 1E-17 3.5E-22 146.0 9.1 107 157-265 18-126 (149)
122 2je0_A Acidic leucine-rich nuc 99.7 2.5E-17 8.6E-22 143.5 9.9 129 179-309 16-149 (149)
123 3omv_A RAF proto-oncogene seri 99.7 3E-17 1E-21 160.5 11.1 106 360-471 36-141 (307)
124 1dce_A Protein (RAB geranylger 99.7 3E-19 1E-23 189.5 -3.6 174 128-307 368-567 (567)
125 3hmm_A TGF-beta receptor type- 99.7 4.9E-17 1.7E-21 159.1 10.1 102 360-470 3-108 (303)
126 2o6r_A Variable lymphocyte rec 99.7 3.9E-16 1.3E-20 140.1 15.2 109 181-289 29-137 (177)
127 2wfh_A SLIT homolog 2 protein 99.7 3.4E-16 1.1E-20 142.9 14.6 107 181-288 32-138 (193)
128 1z7x_W Ribonuclease inhibitor; 99.7 9.9E-19 3.4E-23 180.4 -2.6 194 128-321 166-395 (461)
129 2wfh_A SLIT homolog 2 protein 99.7 3.9E-16 1.3E-20 142.4 14.5 126 137-266 15-140 (193)
130 4b9d_A Serine/threonine-protei 99.7 1.4E-16 4.7E-21 158.2 11.4 94 359-453 23-117 (350)
131 1z7x_W Ribonuclease inhibitor; 99.7 1.1E-18 3.8E-23 180.0 -5.2 193 129-321 139-362 (461)
132 4ay9_X Follicle-stimulating ho 99.7 2.4E-16 8.4E-21 157.2 11.8 219 91-318 8-241 (350)
133 4aw0_A HPDK1, 3-phosphoinositi 99.6 1.1E-16 3.8E-21 156.3 7.6 94 360-453 32-126 (311)
134 4g31_A Eukaryotic translation 99.6 4E-16 1.4E-20 152.2 11.2 107 360-468 5-124 (299)
135 3fpq_A Serine/threonine-protei 99.6 5.1E-16 1.7E-20 150.5 10.0 103 362-468 28-135 (290)
136 1ds9_A Outer arm dynein; leuci 99.6 1.1E-18 3.6E-23 160.0 -8.8 130 131-265 17-153 (198)
137 1ds9_A Outer arm dynein; leuci 99.6 1.5E-18 5E-23 159.0 -8.1 155 152-313 14-185 (198)
138 4fih_A Serine/threonine-protei 99.6 3E-16 1E-20 155.5 6.7 102 360-468 74-176 (346)
139 3hyh_A Carbon catabolite-derep 99.6 1E-15 3.5E-20 147.2 9.9 94 360-454 13-107 (275)
140 4ase_A Vascular endothelial gr 99.6 8.8E-16 3E-20 153.1 8.6 109 360-470 64-193 (353)
141 4g3f_A NF-kappa-beta-inducing 99.6 9.6E-16 3.3E-20 151.4 7.8 101 358-469 56-157 (336)
142 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.4E-20 136.0 8.2 130 153-288 16-152 (176)
143 4fie_A Serine/threonine-protei 99.6 8.9E-16 3E-20 155.9 7.3 101 360-467 151-252 (423)
144 1a9n_A U2A', U2A'; complex (nu 99.6 3.7E-15 1.3E-19 133.6 9.5 133 175-313 14-153 (176)
145 3ubd_A Ribosomal protein S6 ki 99.5 1.1E-15 3.9E-20 148.9 3.0 94 360-454 24-121 (304)
146 3g39_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 125.6 13.2 86 156-241 30-115 (170)
147 3g39_A Variable lymphocyte rec 99.5 4.7E-14 1.6E-18 125.8 12.9 106 158-266 11-116 (170)
148 2qkw_B Protein kinase; three-h 99.5 1.6E-14 5.4E-19 141.9 9.9 119 349-470 28-147 (321)
149 2r9u_A Variable lymphocyte rec 99.5 9.7E-14 3.3E-18 124.3 13.2 102 137-241 17-118 (174)
150 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.9E-18 123.8 12.9 104 159-265 15-118 (174)
151 2nru_A Interleukin-1 receptor- 99.5 4.2E-14 1.4E-18 137.7 9.4 121 349-470 14-141 (307)
152 3uim_A Brassinosteroid insensi 99.5 2.4E-14 8.1E-19 140.8 7.6 120 349-470 19-139 (326)
153 3p86_A Serine/threonine-protei 99.5 7E-14 2.4E-18 136.9 9.2 119 350-470 27-145 (309)
154 3uto_A Twitchin; kinase, muscl 99.5 1.1E-13 3.6E-18 147.0 11.0 92 360-454 157-249 (573)
155 3s95_A LIMK-1, LIM domain kina 99.5 3.4E-13 1.2E-17 131.6 12.9 107 359-470 9-116 (310)
156 4b99_A Mitogen-activated prote 99.5 1.4E-13 4.8E-18 139.4 10.0 104 360-468 54-164 (398)
157 3qd2_B Eukaryotic translation 99.5 2.2E-13 7.4E-18 133.7 11.1 108 360-469 6-171 (332)
158 2c30_A Serine/threonine-protei 99.4 2.6E-13 8.7E-18 133.5 10.6 115 349-470 24-149 (321)
159 2qol_A Ephrin receptor; recept 99.4 2E-13 7E-18 137.2 9.9 107 360-470 45-155 (373)
160 4aw2_A Serine/threonine-protei 99.4 1.3E-13 4.4E-18 141.6 8.0 117 350-468 64-181 (437)
161 4hcu_A Tyrosine-protein kinase 99.4 4.2E-13 1.4E-17 128.1 10.7 104 360-469 10-113 (269)
162 3v5w_A G-protein coupled recep 99.4 1.8E-13 6.2E-18 145.7 8.7 97 358-454 187-287 (689)
163 3ogk_B Coronatine-insensitive 99.4 2.7E-15 9.2E-20 159.6 -5.6 187 128-314 289-502 (592)
164 2vd5_A DMPK protein; serine/th 99.4 2E-13 6.9E-18 139.1 8.0 116 350-467 51-167 (412)
165 4eqm_A Protein kinase; transfe 99.4 4.9E-13 1.7E-17 129.7 10.1 107 360-469 11-118 (294)
166 3kul_A Ephrin type-A receptor 99.4 6.1E-13 2.1E-17 131.0 10.9 107 360-470 49-159 (325)
167 2psq_A Fibroblast growth facto 99.4 7.3E-13 2.5E-17 133.0 11.0 110 359-470 80-211 (370)
168 3v8s_A RHO-associated protein 99.4 1.2E-13 4E-18 140.8 5.2 102 352-453 61-163 (410)
169 3kmu_A ILK, integrin-linked ki 99.4 4.7E-13 1.6E-17 127.4 8.9 108 360-470 10-119 (271)
170 1luf_A Muscle-specific tyrosin 99.4 8E-13 2.7E-17 130.6 10.8 113 356-470 43-182 (343)
171 3fe3_A MAP/microtubule affinit 99.4 8E-13 2.7E-17 130.5 10.5 107 357-467 12-119 (328)
172 3uqc_A Probable conserved tran 99.4 9.8E-13 3.3E-17 127.3 10.6 93 360-452 31-124 (286)
173 4euu_A Serine/threonine-protei 99.4 8.3E-13 2.8E-17 129.4 10.1 109 360-470 9-120 (319)
174 3ogk_B Coronatine-insensitive 99.4 4.2E-14 1.4E-18 150.3 0.6 188 130-318 162-396 (592)
175 3sb4_A Hypothetical leucine ri 99.4 1.1E-12 3.8E-17 129.4 10.7 164 155-321 100-318 (329)
176 3cbl_A C-FES, proto-oncogene t 99.4 4E-13 1.4E-17 135.2 7.6 107 359-469 113-220 (377)
177 1fot_A TPK1 delta, CAMP-depend 99.4 7.5E-13 2.6E-17 130.2 9.4 107 359-468 5-112 (318)
178 3gen_A Tyrosine-protein kinase 99.4 9.3E-13 3.2E-17 126.6 9.8 106 358-469 22-127 (283)
179 1opk_A P150, C-ABL, proto-onco 99.4 6E-13 2E-17 138.9 8.8 108 358-470 218-326 (495)
180 1tki_A Titin; serine kinase, m 99.4 1.9E-12 6.6E-17 127.3 11.9 105 359-469 4-109 (321)
181 1o6l_A RAC-beta serine/threoni 99.4 7.3E-13 2.5E-17 131.4 8.9 106 359-467 4-110 (337)
182 3sxs_A Cytoplasmic tyrosine-pr 99.4 8.4E-13 2.9E-17 125.8 8.8 106 359-470 7-112 (268)
183 4f9c_A Cell division cycle 7-r 99.4 1.2E-12 4.2E-17 130.9 10.3 91 357-452 18-113 (361)
184 3soc_A Activin receptor type-2 99.4 1.1E-12 3.7E-17 129.0 9.8 104 358-470 22-129 (322)
185 4fr4_A YANK1, serine/threonine 99.4 9.9E-13 3.4E-17 132.7 9.6 106 360-468 15-121 (384)
186 3cok_A Serine/threonine-protei 99.4 1E-12 3.6E-17 125.9 9.3 110 358-469 9-119 (278)
187 3zgw_A Maternal embryonic leuc 99.4 8.6E-13 2.9E-17 131.4 8.9 107 358-469 8-115 (347)
188 3a8x_A Protein kinase C IOTA t 99.4 1.3E-12 4.5E-17 129.9 10.0 107 359-468 8-116 (345)
189 3fdn_A Serine/threonine-protei 99.4 9.3E-13 3.2E-17 126.4 8.6 109 358-469 7-116 (279)
190 3vhe_A Vascular endothelial gr 99.4 1E-12 3.4E-17 130.8 9.0 99 354-454 16-122 (359)
191 2ifg_A High affinity nerve gro 99.4 1.9E-12 6.4E-17 128.5 10.8 92 148-241 24-116 (347)
192 2x4f_A Myosin light chain kina 99.4 1.9E-12 6.5E-17 130.2 11.0 103 362-469 91-194 (373)
193 3l9p_A Anaplastic lymphoma kin 99.4 1.3E-12 4.5E-17 131.0 9.7 109 360-470 71-189 (367)
194 3fxz_A Serine/threonine-protei 99.4 1.9E-12 6.6E-17 125.7 10.6 104 359-469 19-123 (297)
195 1rdq_E PKA C-alpha, CAMP-depen 99.4 1.1E-12 3.8E-17 130.8 9.0 107 359-468 40-147 (350)
196 3tki_A Serine/threonine-protei 99.4 1.2E-12 4.3E-17 128.7 9.3 105 360-469 7-112 (323)
197 2yab_A Death-associated protei 99.4 1.2E-12 4.2E-17 131.0 9.2 108 359-469 11-122 (361)
198 3kfa_A Tyrosine-protein kinase 99.4 1.4E-12 4.8E-17 125.5 9.3 109 356-469 9-118 (288)
199 2bdw_A Hypothetical protein K1 99.4 2.1E-12 7E-17 129.3 10.8 107 359-469 28-135 (362)
200 3t9t_A Tyrosine-protein kinase 99.4 1.7E-12 5.7E-17 123.5 9.6 104 360-469 8-111 (267)
201 3txo_A PKC-L, NPKC-ETA, protei 99.4 1.3E-12 4.4E-17 130.4 9.1 107 359-468 22-130 (353)
202 1qcf_A Haematopoetic cell kina 99.3 1E-12 3.5E-17 135.6 8.6 106 358-469 186-291 (454)
203 2h34_A Serine/threonine-protei 99.3 2.2E-12 7.5E-17 125.9 10.4 109 359-470 33-142 (309)
204 3ork_A Serine/threonine protei 99.3 6.5E-13 2.2E-17 129.8 6.6 107 360-469 12-123 (311)
205 2rku_A Serine/threonine-protei 99.3 2E-12 6.8E-17 125.0 10.0 109 359-470 14-123 (294)
206 2y0a_A Death-associated protei 99.3 1.6E-12 5.4E-17 128.1 9.3 107 360-469 11-121 (326)
207 2wqm_A Serine/threonine-protei 99.3 2.7E-12 9.1E-17 125.1 10.8 111 359-469 31-143 (310)
208 3ugc_A Tyrosine-protein kinase 99.3 1.4E-12 4.8E-17 126.2 8.7 105 360-469 10-121 (295)
209 2y94_A 5'-AMP-activated protei 99.3 1.7E-12 5.9E-17 134.6 9.9 107 360-469 16-123 (476)
210 2ivs_A Proto-oncogene tyrosine 99.3 2E-12 7E-17 125.9 9.8 111 358-470 21-158 (314)
211 2ifg_A High affinity nerve gro 99.3 2.5E-12 8.5E-17 127.7 10.6 106 159-267 11-118 (347)
212 1xjd_A Protein kinase C, theta 99.3 1.2E-12 4E-17 130.3 8.1 108 358-468 15-124 (345)
213 3gni_B Strad alpha; kinase fol 99.3 3E-12 1E-16 129.1 11.3 111 357-469 22-135 (389)
214 2pvf_A Fibroblast growth facto 99.3 2.8E-12 9.6E-17 126.6 10.6 110 359-470 34-165 (334)
215 4eut_A Serine/threonine-protei 99.3 1.7E-12 5.8E-17 131.5 9.3 109 360-470 9-120 (396)
216 4dc2_A Protein kinase C IOTA t 99.3 1.3E-12 4.4E-17 132.4 8.1 107 359-468 51-159 (396)
217 2acx_A G protein-coupled recep 99.3 1.8E-12 6.2E-17 136.9 9.5 111 358-469 182-293 (576)
218 1kob_A Twitchin; kinase, intra 99.3 4.8E-12 1.6E-16 127.9 12.2 105 360-469 51-156 (387)
219 2h6d_A 5'-AMP-activated protei 99.3 2E-12 6.7E-17 123.7 8.9 107 360-469 11-118 (276)
220 2owb_A Serine/threonine-protei 99.3 2.6E-12 9E-17 126.9 10.0 108 359-469 40-148 (335)
221 3c0i_A Peripheral plasma membr 99.3 1.1E-12 3.9E-17 130.5 7.4 109 360-468 24-136 (351)
222 1t46_A HOMO sapiens V-KIT hard 99.3 2.3E-12 7.7E-17 125.5 9.2 110 359-470 22-153 (313)
223 1p4o_A Insulin-like growth fac 99.3 1.1E-12 3.7E-17 128.6 6.9 116 352-469 17-145 (322)
224 2eva_A TAK1 kinase - TAB1 chim 99.3 2.1E-12 7.3E-17 126.0 9.0 102 360-469 8-109 (307)
225 3un9_A NLR family member X1; l 99.3 2.1E-14 7.2E-19 144.4 -5.5 167 131-297 71-260 (372)
226 3uc3_A Serine/threonine-protei 99.3 3.3E-12 1.1E-16 127.7 10.5 105 358-469 18-123 (361)
227 3tt0_A Basic fibroblast growth 99.3 2.9E-12 9.9E-17 129.1 10.1 109 360-470 69-199 (382)
228 1fmk_A C-SRC, P60-SRC, tyrosin 99.3 1.3E-12 4.4E-17 134.8 7.6 106 359-470 183-288 (452)
229 1u5q_A Serine/threonine protei 99.3 2.9E-12 9.8E-17 127.6 9.8 108 360-470 54-162 (348)
230 1rjb_A FL cytokine receptor; k 99.3 2.8E-12 9.7E-17 126.9 9.3 111 358-470 43-180 (344)
231 1k9a_A Carboxyl-terminal SRC k 99.3 3.3E-12 1.1E-16 131.7 10.1 106 358-470 191-297 (450)
232 2w4o_A Calcium/calmodulin-depe 99.3 2.8E-12 9.5E-17 127.7 9.3 104 358-469 51-155 (349)
233 1x8b_A WEE1HU, WEE1-like prote 99.3 2.1E-12 7.3E-17 123.8 8.2 111 359-470 10-123 (289)
234 2clq_A Mitogen-activated prote 99.3 4.5E-12 1.5E-16 122.3 10.5 105 361-468 23-128 (295)
235 4fvq_A Tyrosine-protein kinase 99.3 3.1E-12 1.1E-16 123.1 9.3 105 360-469 8-120 (289)
236 2yfx_A Tyrosine-protein kinase 99.3 4.1E-12 1.4E-16 124.9 10.3 110 359-470 29-148 (327)
237 3dtc_A Mitogen-activated prote 99.3 2.4E-12 8.1E-17 122.8 8.3 106 359-469 6-112 (271)
238 2eue_A Carbon catabolite derep 99.3 4.2E-12 1.5E-16 121.5 10.0 106 360-469 13-119 (275)
239 3c4z_A Rhodopsin kinase; Ser/T 99.3 3.4E-12 1.1E-16 134.3 10.0 110 359-468 184-295 (543)
240 3p1a_A MYT1 kinase, membrane-a 99.3 3.9E-12 1.3E-16 124.3 9.9 107 360-470 57-165 (311)
241 2vgo_A Serine/threonine-protei 99.3 2.1E-12 7.2E-17 124.2 7.7 107 360-469 14-121 (284)
242 3q5i_A Protein kinase; CDPK, m 99.3 3.7E-12 1.3E-16 133.2 9.9 108 359-469 35-153 (504)
243 3e7e_A HBUB1, BUB1A, mitotic c 99.3 3.3E-12 1.1E-16 127.7 9.2 110 355-470 60-180 (365)
244 3h4j_B AMPK kdaid, SNF1-like p 99.3 1.6E-12 5.6E-17 128.8 6.8 107 359-469 8-115 (336)
245 3a62_A Ribosomal protein S6 ki 99.3 2.7E-12 9.1E-17 126.6 8.3 105 360-467 17-126 (327)
246 4f0f_A Serine/threonine-protei 99.3 6.1E-12 2.1E-16 121.0 10.7 107 360-470 19-130 (287)
247 3soa_A Calcium/calmodulin-depe 99.3 5E-12 1.7E-16 130.1 10.7 106 359-468 10-116 (444)
248 3eqc_A Dual specificity mitoge 99.3 4.7E-12 1.6E-16 126.2 10.2 105 360-469 33-138 (360)
249 4ejn_A RAC-alpha serine/threon 99.3 1.3E-12 4.6E-17 134.4 6.4 108 359-469 147-255 (446)
250 3is5_A Calcium-dependent prote 99.3 2.4E-12 8.2E-17 124.1 7.7 108 360-469 22-131 (285)
251 2zv2_A Calcium/calmodulin-depe 99.3 4.7E-12 1.6E-16 122.7 9.8 107 359-469 12-144 (298)
252 3f3z_A Calcium/calmodulin-depe 99.3 4E-12 1.4E-16 121.7 9.1 104 360-469 9-113 (277)
253 2h8h_A Proto-oncogene tyrosine 99.3 1.6E-12 5.5E-17 137.0 6.8 106 359-470 266-371 (535)
254 2w5a_A Serine/threonine-protei 99.3 4.7E-12 1.6E-16 121.2 9.5 111 359-470 5-119 (279)
255 3un9_A NLR family member X1; l 99.3 7.3E-14 2.5E-18 140.4 -3.6 164 155-318 71-257 (372)
256 3bhy_A Death-associated protei 99.3 3.3E-12 1.1E-16 122.6 8.1 107 360-469 5-115 (283)
257 4agu_A Cyclin-dependent kinase 99.3 7.9E-12 2.7E-16 121.7 10.9 106 360-469 3-109 (311)
258 1phk_A Phosphorylase kinase; g 99.3 7.8E-12 2.7E-16 120.9 10.8 108 359-469 16-131 (298)
259 3niz_A Rhodanese family protei 99.3 5.5E-12 1.9E-16 123.3 9.7 106 359-468 20-125 (311)
260 3hko_A Calcium/calmodulin-depe 99.3 2.2E-12 7.7E-17 127.5 6.9 97 355-451 21-120 (345)
261 3kk8_A Calcium/calmodulin depe 99.3 6.8E-12 2.3E-16 120.4 10.1 107 359-469 5-112 (284)
262 3lxp_A Non-receptor tyrosine-p 99.3 1.2E-11 4E-16 121.3 11.9 103 361-469 32-141 (318)
263 2yex_A Serine/threonine-protei 99.3 8.2E-12 2.8E-16 119.2 10.3 105 360-469 7-112 (276)
264 2i0e_A Protein kinase C-beta I 99.3 2.7E-12 9.2E-17 128.1 7.2 107 359-468 19-127 (353)
265 2a2a_A Death-associated protei 99.3 3.8E-12 1.3E-16 124.9 8.0 107 360-469 12-122 (321)
266 3kn6_A Ribosomal protein S6 ki 99.3 6.7E-12 2.3E-16 123.6 9.7 96 365-469 16-113 (325)
267 2pml_X PFPK7, Ser/Thr protein 99.3 2E-12 6.7E-17 128.1 5.7 110 359-470 30-159 (348)
268 3nyv_A Calmodulin-domain prote 99.3 3.8E-12 1.3E-16 132.3 8.2 107 360-469 26-133 (484)
269 2r5t_A Serine/threonine-protei 99.3 3.7E-12 1.3E-16 128.0 7.8 95 359-453 37-133 (373)
270 1mp8_A Focal adhesion kinase 1 99.3 8.9E-12 3.1E-16 119.7 10.2 107 358-469 13-123 (281)
271 4e5w_A Tyrosine-protein kinase 99.3 5.6E-12 1.9E-16 122.2 8.8 106 360-469 21-133 (302)
272 3lxl_A Tyrosine-protein kinase 99.3 8E-12 2.7E-16 122.8 10.0 105 360-469 23-134 (327)
273 1u59_A Tyrosine-protein kinase 99.3 1.2E-11 4.1E-16 119.2 11.1 106 360-470 9-118 (287)
274 1qpc_A LCK kinase; alpha beta 99.3 4.4E-12 1.5E-16 121.5 7.9 106 359-470 12-117 (279)
275 3q4u_A Activin receptor type-1 99.3 1.2E-11 4.1E-16 119.7 10.8 101 359-470 7-113 (301)
276 2buj_A Serine/threonine-protei 99.3 8.1E-12 2.8E-16 122.0 9.6 109 359-470 28-142 (317)
277 3i6u_A CDS1, serine/threonine- 99.3 6.9E-12 2.3E-16 128.1 9.3 107 359-469 134-246 (419)
278 3qup_A Tyrosine-protein kinase 99.3 4.4E-12 1.5E-16 124.3 7.6 117 353-470 16-145 (323)
279 2w1i_A JAK2; chromosomal rearr 99.3 1.2E-11 4E-16 121.6 10.6 105 360-469 41-152 (326)
280 3gxj_A TGF-beta receptor type- 99.3 5.6E-12 1.9E-16 122.0 8.2 99 360-469 3-107 (303)
281 2j7t_A Serine/threonine-protei 99.3 8.7E-12 3E-16 120.8 9.4 106 359-469 18-124 (302)
282 1mqb_A Ephrin type-A receptor 99.3 9.2E-12 3.1E-16 123.0 9.5 107 360-470 44-155 (333)
283 2vwi_A Serine/threonine-protei 99.3 5.5E-12 1.9E-16 122.1 7.8 110 359-470 14-129 (303)
284 1fvr_A Tyrosine-protein kinase 99.3 1.3E-11 4.4E-16 121.3 10.5 109 360-470 25-150 (327)
285 2jam_A Calcium/calmodulin-depe 99.3 1E-11 3.5E-16 120.7 9.5 103 360-468 9-112 (304)
286 2ac3_A MAP kinase-interacting 99.3 1.2E-11 3.9E-16 120.8 9.9 104 360-469 12-118 (316)
287 2y7j_A Phosphorylase B kinase 99.3 1.4E-11 4.6E-16 123.5 10.6 108 359-469 93-207 (365)
288 1zy4_A Serine/threonine-protei 99.3 1.2E-11 4.1E-16 119.4 9.8 104 359-468 5-122 (303)
289 3sb4_A Hypothetical leucine ri 99.3 4.3E-12 1.5E-16 125.2 6.7 132 179-313 100-286 (329)
290 2a19_B Interferon-induced, dou 99.3 7.7E-12 2.6E-16 119.9 8.2 102 360-469 11-129 (284)
291 1ob3_A PFPK5, cell division co 99.3 8.5E-12 2.9E-16 120.3 8.6 106 360-469 2-107 (288)
292 1t4h_A Serine/threonine-protei 99.3 1.6E-11 5.6E-16 118.3 10.4 105 361-469 27-136 (290)
293 2xir_A Vascular endothelial gr 99.3 9.9E-12 3.4E-16 121.1 8.9 112 356-469 23-155 (316)
294 3lij_A Calcium/calmodulin depe 99.3 8E-12 2.7E-16 130.3 8.8 106 360-469 37-143 (494)
295 2i1m_A Macrophage colony-stimu 99.3 7.4E-12 2.5E-16 123.2 8.1 112 356-469 42-171 (333)
296 3gbz_A Kinase, CMGC CDK; ssgci 99.3 1.2E-11 4.2E-16 121.8 9.6 108 357-469 31-139 (329)
297 2qr7_A Ribosomal protein S6 ki 99.3 7.1E-12 2.4E-16 124.5 7.9 100 360-469 22-123 (342)
298 3a7i_A MST3 kinase, serine/thr 99.2 1.6E-11 5.3E-16 119.2 10.1 104 360-469 22-126 (303)
299 2ozo_A Tyrosine-protein kinase 99.2 1.1E-11 3.7E-16 132.7 9.8 105 361-470 336-444 (613)
300 4aaa_A Cyclin-dependent kinase 99.2 1.8E-11 6.2E-16 120.5 10.6 108 358-469 23-131 (331)
301 3brb_A Proto-oncogene tyrosine 99.2 1.4E-11 4.7E-16 120.2 9.6 117 353-470 27-155 (313)
302 2x7f_A TRAF2 and NCK-interacti 99.2 1E-11 3.5E-16 121.8 8.6 114 350-468 14-135 (326)
303 3o0g_A Cell division protein k 99.2 1.7E-11 5.7E-16 118.5 9.9 106 360-469 2-108 (292)
304 2pmi_A Negative RE, cyclin-dep 99.2 1.1E-11 3.6E-16 121.6 8.4 107 359-468 4-114 (317)
305 2ycf_A Serine/threonine-protei 99.2 1.4E-11 4.7E-16 120.9 8.8 105 360-468 10-120 (322)
306 2izr_A Casein kinase I isoform 99.2 1.6E-11 5.4E-16 120.9 9.0 103 360-470 9-113 (330)
307 3com_A Serine/threonine-protei 99.2 2.1E-11 7.2E-16 118.9 9.6 104 359-469 28-132 (314)
308 3mwu_A Calmodulin-domain prote 99.2 1.1E-11 3.8E-16 128.9 7.8 106 360-469 22-128 (486)
309 3poz_A Epidermal growth factor 99.2 1.8E-11 6.1E-16 120.5 8.9 105 360-469 15-124 (327)
310 3f66_A Hepatocyte growth facto 99.2 2.1E-11 7.3E-16 117.9 9.2 106 360-469 25-135 (298)
311 3llt_A Serine/threonine kinase 99.2 3.2E-11 1.1E-15 120.1 10.7 115 349-469 24-144 (360)
312 2p1m_B Transport inhibitor res 99.2 1.4E-12 4.7E-17 138.6 0.7 57 250-307 287-345 (594)
313 1xbb_A Tyrosine-protein kinase 99.2 2.4E-11 8.2E-16 117.3 9.4 107 358-469 14-124 (291)
314 3dls_A PAS domain-containing s 99.2 7.2E-12 2.5E-16 123.9 5.7 108 359-469 23-137 (335)
315 3pls_A Macrophage-stimulating 99.2 2.9E-11 9.8E-16 116.8 9.7 105 361-469 22-131 (298)
316 3c1x_A Hepatocyte growth facto 99.2 1.4E-11 4.7E-16 123.9 7.6 105 361-469 90-199 (373)
317 3lb7_A RAF proto-oncogene seri 99.2 4E-11 1.4E-15 117.0 10.5 104 360-469 36-139 (307)
318 1b6c_B TGF-B superfamily recep 99.2 3.2E-11 1.1E-15 119.0 9.8 101 359-470 41-147 (342)
319 2wei_A Calmodulin-domain prote 99.2 1.8E-11 6.3E-16 117.9 7.9 106 360-469 22-128 (287)
320 3dbq_A Dual specificity protei 99.2 3.2E-11 1.1E-15 119.5 9.8 106 359-469 8-115 (343)
321 3pg1_A Mitogen-activated prote 99.2 3.1E-11 1.1E-15 120.2 9.4 116 351-469 13-141 (362)
322 2pzi_A Probable serine/threoni 99.2 1.8E-11 6.1E-16 132.7 8.3 104 360-470 80-190 (681)
323 4fl3_A Tyrosine-protein kinase 99.2 2.4E-11 8.1E-16 130.6 9.0 100 366-470 375-477 (635)
324 1u46_A ACK-1, activated CDC42 99.2 1.9E-11 6.4E-16 117.7 7.4 107 360-469 18-128 (291)
325 3mdy_A Bone morphogenetic prot 99.2 4.2E-11 1.4E-15 117.8 10.0 100 359-469 36-141 (337)
326 3cc6_A Protein tyrosine kinase 99.2 4.1E-11 1.4E-15 114.9 9.6 107 358-469 10-120 (281)
327 3og7_A AKAP9-BRAF fusion prote 99.2 3.6E-11 1.2E-15 116.0 9.0 104 360-469 24-127 (289)
328 2r3i_A Cell division protein k 99.2 3.8E-11 1.3E-15 116.1 9.0 107 360-469 3-110 (299)
329 2zmd_A Dual specificity protei 99.2 4.9E-11 1.7E-15 120.5 10.2 105 360-469 56-162 (390)
330 2p1m_B Transport inhibitor res 99.2 1.9E-13 6.5E-18 145.3 -8.0 184 130-315 287-496 (594)
331 3ll6_A Cyclin G-associated kin 99.2 2.6E-11 9E-16 119.0 7.8 109 358-470 26-144 (337)
332 3pfq_A PKC-B, PKC-beta, protei 99.2 2.3E-11 7.8E-16 131.6 8.0 109 358-469 339-449 (674)
333 1byg_A CSK, protein (C-termina 99.2 1.6E-11 5.6E-16 117.5 6.1 104 359-469 20-124 (278)
334 2wtk_C Serine/threonine-protei 99.2 4.2E-11 1.4E-15 116.1 8.8 108 360-469 5-116 (305)
335 2j0j_A Focal adhesion kinase 1 99.2 8.3E-11 2.8E-15 126.8 11.9 107 358-469 388-498 (656)
336 1vzo_A Ribosomal protein S6 ki 99.2 8.8E-12 3E-16 124.3 3.9 107 359-468 53-165 (355)
337 3fme_A Dual specificity mitoge 99.2 5.7E-11 2E-15 114.2 9.4 110 359-470 6-117 (290)
338 1nxk_A MAP kinase-activated pr 99.2 5.7E-11 2E-15 120.5 9.5 102 360-470 61-169 (400)
339 2i6l_A Mitogen-activated prote 99.2 9.9E-11 3.4E-15 114.0 10.8 102 360-469 11-127 (320)
340 3an0_A Dual specificity mitoge 99.2 5.2E-11 1.8E-15 117.5 8.6 112 356-470 47-161 (340)
341 3byv_A Rhoptry kinase; malaria 99.1 4.5E-12 1.6E-16 127.4 0.6 113 357-470 70-214 (377)
342 3nsz_A CK II alpha, casein kin 99.1 1.4E-10 4.9E-15 113.7 11.4 88 359-452 35-126 (330)
343 3lm5_A Serine/threonine-protei 99.1 5.8E-11 2E-15 116.8 8.3 108 360-469 28-138 (327)
344 3mtl_A Cell division protein k 99.1 2E-11 6.9E-16 119.9 5.0 104 360-468 2-106 (324)
345 3cek_A Dual specificity protei 99.1 7.4E-11 2.5E-15 115.0 8.9 115 350-469 18-134 (313)
346 3m2w_A MAP kinase-activated pr 99.1 1E-10 3.5E-15 113.4 9.6 101 360-469 17-124 (299)
347 1ua2_A CAK, cell division prot 99.1 4.1E-11 1.4E-15 118.9 6.8 96 358-454 8-106 (346)
348 3eb0_A Putative uncharacterize 99.1 3.7E-11 1.3E-15 121.0 6.4 105 357-469 4-148 (383)
349 3n9x_A Phosphotransferase; mal 99.1 1E-10 3.4E-15 119.9 9.5 106 359-469 25-136 (432)
350 3qa8_A MGC80376 protein; kinas 99.1 1.7E-11 5.8E-16 131.2 3.7 108 360-469 14-128 (676)
351 3kex_A Receptor tyrosine-prote 99.1 2.6E-11 8.8E-16 119.2 4.3 105 360-469 13-122 (325)
352 3rp9_A Mitogen-activated prote 99.1 9.9E-11 3.4E-15 120.7 8.8 105 359-468 52-162 (458)
353 3op5_A Serine/threonine-protei 99.1 9.3E-11 3.2E-15 117.1 8.2 110 358-470 33-160 (364)
354 2vuw_A Serine/threonine-protei 99.1 4.9E-12 1.7E-16 124.9 -1.3 105 359-468 19-167 (336)
355 1csn_A Casein kinase-1; phosph 99.1 1.5E-10 5.1E-15 111.7 9.2 103 360-470 10-114 (298)
356 2b9h_A MAP kinase FUS3, mitoge 99.1 1.5E-10 5.2E-15 114.6 9.3 104 359-469 10-119 (353)
357 1cm8_A Phosphorylated MAP kina 99.1 1.2E-10 4E-15 116.7 8.5 104 359-468 24-134 (367)
358 2v62_A Serine/threonine-protei 99.1 7.5E-11 2.6E-15 116.9 6.9 107 360-470 37-159 (345)
359 3g2f_A Bone morphogenetic prot 99.1 9E-11 3.1E-15 115.5 7.4 102 359-469 12-118 (336)
360 3mi9_A Cell division protein k 99.1 1.7E-10 6E-15 114.4 9.2 107 359-469 16-131 (351)
361 3g33_A Cell division protein k 99.1 1.6E-10 5.3E-15 112.5 8.3 110 359-470 8-128 (308)
362 3qyz_A Mitogen-activated prote 99.1 1.8E-10 6.3E-15 114.9 8.9 107 356-469 23-135 (364)
363 3oz6_A Mitogen-activated prote 99.1 2.6E-10 8.9E-15 114.9 10.1 104 359-468 8-115 (388)
364 3lzb_A Epidermal growth factor 99.1 1.4E-10 4.9E-15 114.1 7.9 105 360-469 15-124 (327)
365 1blx_A Cyclin-dependent kinase 99.1 7.3E-11 2.5E-15 115.5 5.4 112 355-469 6-127 (326)
366 3fhr_A MAP kinase-activated pr 99.1 3E-10 1E-14 112.2 9.6 103 360-470 28-136 (336)
367 3aln_A Dual specificity mitoge 99.1 3.4E-10 1.2E-14 111.0 9.8 107 360-469 22-132 (327)
368 2jii_A Serine/threonine-protei 99.1 6.4E-11 2.2E-15 117.7 4.6 101 360-470 42-167 (352)
369 2iwi_A Serine/threonine-protei 99.1 5E-11 1.7E-15 116.1 3.7 109 359-470 30-147 (312)
370 3ttj_A Mitogen-activated prote 99.1 2.2E-10 7.4E-15 118.5 8.7 104 358-468 60-170 (464)
371 2xrw_A Mitogen-activated prote 99.1 3.6E-10 1.2E-14 113.2 10.0 104 359-469 24-134 (371)
372 2y4i_B KSR2, HKSR2, kinase sup 99.1 2.6E-11 8.8E-16 118.4 1.5 108 357-469 30-137 (319)
373 4exu_A Mitogen-activated prote 99.0 2.9E-10 9.9E-15 113.9 8.8 104 359-469 41-151 (371)
374 3e3p_A Protein kinase, putativ 99.0 1.8E-10 6.1E-15 114.5 7.1 109 355-468 18-135 (360)
375 3coi_A Mitogen-activated prote 99.0 3.3E-10 1.1E-14 112.5 8.9 104 359-469 23-133 (353)
376 4fdw_A Leucine rich hypothetic 99.0 2.2E-09 7.5E-14 108.8 14.9 178 128-313 176-358 (401)
377 2fst_X Mitogen-activated prote 99.0 3.1E-10 1.1E-14 113.7 8.3 106 358-469 27-139 (367)
378 3kvw_A DYRK2, dual specificity 99.0 7.5E-10 2.6E-14 113.2 10.7 105 360-470 97-208 (429)
379 1z57_A Dual specificity protei 99.0 4.7E-10 1.6E-14 110.0 8.4 104 360-469 14-125 (339)
380 3q60_A ROP5B; pseudokinase, tr 99.0 3.4E-10 1.1E-14 113.3 7.4 94 358-453 60-181 (371)
381 2dyl_A Dual specificity mitoge 99.0 7.6E-10 2.6E-14 107.8 9.7 109 357-469 22-131 (318)
382 1wak_A Serine/threonine-protei 99.0 5.5E-10 1.9E-14 112.2 8.6 104 360-469 37-153 (397)
383 1j1b_A Glycogen synthase kinas 99.0 1.7E-10 5.9E-15 117.7 4.7 102 360-469 54-163 (420)
384 3rgf_A Cyclin-dependent kinase 99.0 2E-10 6.9E-15 116.4 5.2 103 361-469 21-135 (405)
385 2rio_A Serine/threonine-protei 99.0 8.6E-10 2.9E-14 113.0 9.7 86 362-454 17-103 (434)
386 3uzp_A CKI-delta, CKID, casein 99.0 1E-09 3.4E-14 105.7 8.7 104 359-470 8-113 (296)
387 4e7w_A Glycogen synthase kinas 99.0 2.5E-10 8.5E-15 115.5 4.5 102 360-468 40-147 (394)
388 2ra8_A Uncharacterized protein 98.9 1.5E-10 5.3E-15 115.5 2.1 64 250-313 250-320 (362)
389 1q8y_A SR protein kinase; tran 98.9 9E-10 3.1E-14 109.8 7.6 104 360-469 19-138 (373)
390 4hgt_A Casein kinase I isoform 98.9 1.2E-09 4.3E-14 105.0 8.2 104 359-470 8-113 (296)
391 3p23_A Serine/threonine-protei 98.9 1E-09 3.5E-14 112.4 7.8 89 359-454 23-112 (432)
392 2ra8_A Uncharacterized protein 98.9 2.8E-10 9.7E-15 113.6 3.1 179 128-311 135-341 (362)
393 2vx3_A Dual specificity tyrosi 98.9 2.2E-09 7.7E-14 107.8 9.7 108 357-470 51-165 (382)
394 3a99_A Proto-oncogene serine/t 98.9 3.3E-10 1.1E-14 111.0 2.5 108 359-469 42-156 (320)
395 4fdw_A Leucine rich hypothetic 98.9 1.2E-08 4.1E-13 103.3 14.0 172 128-308 132-308 (401)
396 3sv0_A Casein kinase I-like; t 98.9 2.8E-09 9.5E-14 110.6 8.9 104 359-470 6-111 (483)
397 2eu9_A Dual specificity protei 98.9 3E-09 1E-13 105.0 8.6 105 360-470 19-131 (355)
398 3rw6_A Nuclear RNA export fact 98.9 8.6E-12 2.9E-16 118.8 -10.0 19 90-108 76-95 (267)
399 3en9_A Glycoprotease, O-sialog 98.8 2.7E-09 9.3E-14 112.3 7.3 89 363-452 339-432 (540)
400 1zar_A RIO2 kinase; serine kin 98.7 1.3E-08 4.3E-13 98.1 7.2 95 352-451 82-191 (282)
401 4azs_A Methyltransferase WBDD; 98.5 1.2E-07 4.3E-12 100.2 9.0 87 368-454 242-337 (569)
402 3rw6_A Nuclear RNA export fact 98.5 5E-09 1.7E-13 99.7 -2.2 79 226-306 168-257 (267)
403 1io0_A Tropomodulin; LRR prote 98.4 2.7E-08 9.4E-13 89.5 0.5 66 128-193 32-106 (185)
404 1io0_A Tropomodulin; LRR prote 98.4 2.8E-08 9.6E-13 89.4 0.2 69 149-217 29-106 (185)
405 3dzo_A Rhoptry kinase domain; 98.3 3E-07 1E-11 93.3 4.5 115 355-470 73-219 (413)
406 1zth_A RIO1 serine protein kin 98.2 1.5E-06 5E-11 82.3 6.4 94 354-451 41-165 (258)
407 4gyi_A RIO2 kinase; protein ki 97.8 2.4E-05 8.3E-10 78.2 7.5 97 353-451 88-203 (397)
408 4fs7_A Uncharacterized protein 97.7 0.0002 6.8E-09 71.8 12.5 174 128-310 158-353 (394)
409 3e4g_A ATP synthase subunit S, 97.5 1.3E-05 4.3E-10 71.0 0.1 34 157-190 62-95 (176)
410 4fs7_A Uncharacterized protein 97.5 0.00076 2.6E-08 67.5 12.7 154 150-310 156-330 (394)
411 3e4g_A ATP synthase subunit S, 97.5 2.8E-05 9.5E-10 68.8 1.7 84 180-263 61-150 (176)
412 4gt6_A Cell surface protein; l 97.4 0.0026 8.8E-08 63.6 15.4 108 200-311 261-368 (394)
413 4h09_A Hypothetical leucine ri 97.3 0.0045 1.5E-07 61.3 15.3 129 176-308 213-341 (379)
414 4h09_A Hypothetical leucine ri 97.2 0.004 1.4E-07 61.6 13.9 132 151-286 212-343 (379)
415 1nd4_A Aminoglycoside 3'-phosp 97.2 0.00044 1.5E-08 64.4 6.4 85 357-447 17-103 (264)
416 3tm0_A Aminoglycoside 3'-phosp 97.2 0.00064 2.2E-08 63.7 7.3 90 357-450 11-101 (263)
417 4gt6_A Cell surface protein; l 97.1 0.0017 5.8E-08 64.9 10.3 131 175-312 260-390 (394)
418 3d1u_A Putative fructosamine-3 96.9 0.0013 4.5E-08 63.0 6.4 77 364-447 19-98 (288)
419 3rfe_A Platelet glycoprotein I 96.7 0.0029 9.8E-08 52.9 6.8 33 182-214 33-65 (130)
420 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0008 2.7E-08 60.5 1.8 14 180-193 70-83 (197)
421 3rfe_A Platelet glycoprotein I 96.5 0.0047 1.6E-07 51.6 6.3 55 137-193 13-68 (130)
422 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0019 6.5E-08 58.1 2.4 19 294-312 151-169 (197)
423 3dxp_A Putative acyl-COA dehyd 95.5 0.029 9.9E-07 55.0 8.1 81 365-448 43-130 (359)
424 3jr1_A Putative fructosamine-3 93.0 0.29 9.8E-06 47.1 8.6 75 365-446 41-118 (312)
425 3f7w_A Putative fructosamine-3 91.9 0.2 6.8E-06 47.2 5.8 76 364-446 19-97 (288)
426 4gkh_A Aminoglycoside 3'-phosp 91.0 0.63 2.2E-05 43.0 8.3 78 368-451 32-112 (272)
427 2olc_A MTR kinase, methylthior 89.7 0.36 1.2E-05 47.8 5.6 78 365-444 35-120 (397)
428 3r70_A Aminoglycoside phosphot 89.6 0.64 2.2E-05 44.5 7.2 74 362-448 39-116 (320)
429 3ovc_A Hygromycin-B 4-O-kinase 87.9 1.3 4.5E-05 43.3 8.2 74 365-447 46-122 (362)
430 3tdw_A Gentamicin resistance p 85.2 1.8 6.1E-05 41.1 7.3 74 366-448 25-102 (306)
431 3cxl_A N-chimerin; SH2, RHO-GA 84.1 0.11 3.7E-06 53.1 -2.0 61 366-430 148-215 (463)
432 3ats_A Putative uncharacterize 80.7 0.77 2.6E-05 44.4 2.7 83 366-448 26-122 (357)
433 3sg8_A APH(2'')-ID; antibiotic 76.8 1.9 6.6E-05 40.6 4.2 74 366-448 26-105 (304)
434 2q83_A YTAA protein; 2635576, 74.9 6.1 0.00021 37.4 7.2 76 366-446 38-118 (346)
435 1zyl_A Hypothetical protein YI 65.9 8.2 0.00028 36.4 5.9 76 366-446 32-114 (328)
436 2pyw_A Uncharacterized protein 57.2 18 0.00062 35.6 6.8 76 365-443 39-122 (420)
437 1nw1_A Choline kinase (49.2 KD 44.3 21 0.00073 35.4 4.9 72 366-446 79-159 (429)
438 3csv_A Aminoglycoside phosphot 42.4 19 0.00066 33.9 4.1 78 367-452 25-105 (333)
439 2ppq_A HSK, HK, homoserine kin 38.0 96 0.0033 28.6 8.3 75 366-446 28-110 (322)
440 3feg_A Choline/ethanolamine ki 28.2 61 0.0021 31.5 5.1 74 366-447 56-138 (379)
441 3i1a_A Spectinomycin phosphotr 27.2 1.2E+02 0.0041 28.6 6.9 68 369-446 32-108 (339)
442 3dxq_A Choline/ethanolamine ki 25.6 58 0.002 30.0 4.3 71 365-446 23-95 (301)
443 3c5i_A Choline kinase; choline 23.7 65 0.0022 30.7 4.3 73 366-446 39-121 (369)
444 2qg7_A Ethanolamine kinase PV0 20.3 1.1E+02 0.0037 30.6 5.2 73 366-446 114-188 (458)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-36 Score=300.21 Aligned_cols=249 Identities=31% Similarity=0.511 Sum_probs=209.4
Q ss_pred cchHHHHHHHhcCCCCCCCCCCCCCCCCCCc--ccceeeCCC---CCEEEEEcCC--CCC--CCCccccccccccCCCCC
Q 042931 63 SPLQLEAKALLNTGWWDSSFWTANYSSDHCK--WIGFTCNSA---GSIIGLHLSR--DYG--SFEEPVQLSQLNFSCFPN 133 (471)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~~w~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~--~~~--~~~~~~~l~~l~l~~l~~ 133 (471)
.++.++|+++.+ +. .+.+| +.+.|||. |.||+|+.. ++|+.|++++ ..+ .+++ .++++++
T Consensus 9 ~aL~~~k~~~~~-~~-~l~~W--~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-------~l~~l~~ 77 (313)
T 1ogq_A 9 QALLQIKKDLGN-PT-TLSSW--LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-------SLANLPY 77 (313)
T ss_dssp HHHHHHHHHTTC-CG-GGTTC--CTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-------GGGGCTT
T ss_pred HHHHHHHHhcCC-cc-cccCC--CCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-------hHhCCCC
Confidence 445566666532 22 46788 44678998 999999854 7999999985 333 3333 2788899
Q ss_pred CCEEEcCC-CCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEcc
Q 042931 134 LENLTFQS-FPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLS 212 (471)
Q Consensus 134 L~~L~L~~-n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~ 212 (471)
|++|++++ |.+.+.+|..++++++|++|+|++|.+++.+|..++++++|++|++++|.+++.+|..+.++++|++|+++
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 89999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCC-CCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCC
Q 042931 213 YNQLSGPLPQEIGNLK-NLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGP 291 (471)
Q Consensus 213 ~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ 291 (471)
+|.++|.+|..+++++ +|++|++++|.+++.+|..+..++ |+.|++++|.+++.+|..+..+++|+.|++++|.+++.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 9999989999999988 899999999999988998888887 99999999998888888888888888888888888877
Q ss_pred CchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 292 IPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 292 ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
+|. +..+++|++|++++|+++|.+|..+..+.
T Consensus 237 ~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 268 (313)
T 1ogq_A 237 LGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268 (313)
T ss_dssp GGG-CCCCTTCCEEECCSSCCEECCCGGGGGCT
T ss_pred cCc-ccccCCCCEEECcCCcccCcCChHHhcCc
Confidence 766 77788888888888888888887766543
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3e-34 Score=309.69 Aligned_cols=227 Identities=23% Similarity=0.417 Sum_probs=194.3
Q ss_pred CCCCCCCCCCCcc---cceeeCCCCCEEEEEcCC--CCCCCCccccccccccCCCCCCCEEEcCCCC-------------
Q 042931 82 FWTANYSSDHCKW---IGFTCNSAGSIIGLHLSR--DYGSFEEPVQLSQLNFSCFPNLENLTFQSFP------------- 143 (471)
Q Consensus 82 ~w~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~--~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~------------- 143 (471)
+| +.+.++|.| .||+|+..|+|++|++++ +.|.+++. +++|++|++|+|++|.
T Consensus 59 ~W--~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~-------l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~ 129 (636)
T 4eco_A 59 NW--NFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDA-------IGQLTELEVLALGSHGEKVNERLFGPKGI 129 (636)
T ss_dssp CC--CCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGG-------GGGCTTCCEEESCCGGGGGTCCSBSTTSB
T ss_pred CC--CCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChH-------HhcCccceEEECcCCccccCCcccccccc
Confidence 68 457899999 999999889999999985 45666654 7889999999998873
Q ss_pred -----------------------------------------------------------------CCccCchhccCCCCC
Q 042931 144 -----------------------------------------------------------------LAGSIPPEISALSKL 158 (471)
Q Consensus 144 -----------------------------------------------------------------l~g~ip~~l~~L~~L 158 (471)
++| ||+.++++++|
T Consensus 130 ~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L 208 (636)
T 4eco_A 130 SANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKL 208 (636)
T ss_dssp CTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTC
T ss_pred ccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCC
Confidence 335 88889999999
Q ss_pred CEEeccCCCCCCc-----------------CCcccC--CCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCC-CCC
Q 042931 159 QRLDLSSNRLTGS-----------------IPSEIG--NLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQ-LSG 218 (471)
Q Consensus 159 ~~L~Ls~N~l~g~-----------------iP~~l~--~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~-l~g 218 (471)
++|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..++++++|++|++++|+ ++|
T Consensus 209 ~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~ 288 (636)
T 4eco_A 209 RQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288 (636)
T ss_dssp CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCH
T ss_pred CEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcc
Confidence 9999999999986 899988 99999999999999999999999999999999999998 888
Q ss_pred -CCcccccCC------CCCCEEeCCCCcccccccc--ccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 219 -PLPQEIGNL------KNLMELDLGTNSLIGPIPS--TLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 219 -~~p~~l~~l------~~L~~L~Ls~N~l~g~ip~--~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
.+|..++++ ++|++|++++|.++ .+|. .++++++|++|++++|.++|.+| .++++++|++|++++|+++
T Consensus 289 ~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 289 EQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp HHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE
T ss_pred ccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc
Confidence 888888776 88999999999988 7888 88999999999999999988888 7888888888888888887
Q ss_pred CCCchhhhcCCC-CCcccCCCCcCcccccccccc
Q 042931 290 GPIPSTLGLLTD-LSYLDLSCNQFSSSIPNDTTK 322 (471)
Q Consensus 290 g~ip~~l~~l~~-L~~L~l~~N~l~g~ip~~~~~ 322 (471)
.+|..+..+++ |+.|++++|+++ .+|..+..
T Consensus 367 -~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 367 -EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp -ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred -cccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 77877888888 888888888887 67765543
No 3
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.4e-33 Score=276.01 Aligned_cols=252 Identities=22% Similarity=0.269 Sum_probs=218.4
Q ss_pred cchHHHHHHHhcCCCCCCCCCCC--CCCCCCCcccceeeCC---------CCCEEEEEcCCCC-CCCCccccccccccCC
Q 042931 63 SPLQLEAKALLNTGWWDSSFWTA--NYSSDHCKWIGFTCNS---------AGSIIGLHLSRDY-GSFEEPVQLSQLNFSC 130 (471)
Q Consensus 63 ~~~~~~~~~l~~~~~~~~~~w~~--~~~~~~C~w~gv~C~~---------~~~v~~l~l~~~~-~~~~~~~~l~~l~l~~ 130 (471)
.++.+++.++..++.....+|.. +...++|.|.|+.|+. ..+|+.|++++.. ..+++. ++.
T Consensus 30 ~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~lp~~-------l~~ 102 (328)
T 4fcg_A 30 DVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQ-------AFR 102 (328)
T ss_dssp HHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSSCCSC-------GGG
T ss_pred HHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCchhcChh-------hhh
Confidence 45566666654333222355631 2357899999999952 3689999987522 233322 677
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCC--------
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGS-------- 202 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~-------- 202 (471)
+++|++|+|++|.+. .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 89999999999999999999999 88999999999999999999999999998765
Q ss_pred -CCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEE
Q 042931 203 -LTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIEL 281 (471)
Q Consensus 203 -l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 281 (471)
+++|++|++++|.++ .+|..++++++|++|++++|.+++ +|..++++++|++|++++|++.+.+|..++.+++|++|
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 999999999999998 899999999999999999999995 77789999999999999999999999999999999999
Q ss_pred eccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccccccccc
Q 042931 282 NVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLLY 325 (471)
Q Consensus 282 ~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 325 (471)
++++|++.+.+|..++.+++|+.|++++|++.+.+|+.+..+..
T Consensus 259 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred ECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 99999999999999999999999999999999999998887664
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-33 Score=309.38 Aligned_cols=239 Identities=27% Similarity=0.385 Sum_probs=159.9
Q ss_pred CCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCC--CCCC---CCccc-cccc---------------cccCCCCCCCEE
Q 042931 79 DSSFWTANYSSDHCKWIGFTCNSAGSIIGLHLSR--DYGS---FEEPV-QLSQ---------------LNFSCFPNLENL 137 (471)
Q Consensus 79 ~~~~w~~~~~~~~C~w~gv~C~~~~~v~~l~l~~--~~~~---~~~~~-~l~~---------------l~l~~l~~L~~L 137 (471)
.+++|. .++|||+|.||+|+ .++|++|++++ ..|. +++.. .+.. -.++.+++|++|
T Consensus 29 ~l~~W~--~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L 105 (768)
T 3rgz_A 29 LLPDWS--SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSL 105 (768)
T ss_dssp SSTTCC--TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEE
T ss_pred cccCCC--CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEE
Confidence 578894 56899999999999 79999999985 3343 22210 1111 137788999999
Q ss_pred EcCCCCCCccCch--hccCCCCCCEEeccCCCCCCcCCccc-CCCCCCcEEEcccCCCCCCCCCc---cCCCC-------
Q 042931 138 TFQSFPLAGSIPP--EISALSKLQRLDLSSNRLTGSIPSEI-GNLRNLVYLNISKNILTGTVPST---LGSLT------- 204 (471)
Q Consensus 138 ~L~~n~l~g~ip~--~l~~L~~L~~L~Ls~N~l~g~iP~~l-~~L~~L~~L~L~~N~l~g~~p~~---l~~l~------- 204 (471)
+|++|.+.|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|.+++..|.. +.+++
T Consensus 106 ~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~L 185 (768)
T 3rgz_A 106 DLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAI 185 (768)
T ss_dssp ECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEEC
T ss_pred ECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEEC
Confidence 9999999999998 89999999999999999988888766 77888888888888887766654 44444
Q ss_pred ---------------CcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCc
Q 042931 205 ---------------NLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLP 269 (471)
Q Consensus 205 ---------------~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p 269 (471)
+|++|++++|.+++.+|. ++++++|++|++++|.+++.+|..++++++|++|++++|.+++.+|
T Consensus 186 s~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 264 (768)
T 3rgz_A 186 SGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264 (768)
T ss_dssp CSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCC
T ss_pred CCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccC
Confidence 445555555555544444 5555555555555555555555555555555555555555555544
Q ss_pred ccccCCCCCCEEeccCCcCcCCCchhhhcC-CCCCcccCCCCcCccccccccccc
Q 042931 270 QEIGNLKNLIELNVGSNSLIGPIPSTLGLL-TDLSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 270 ~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l-~~L~~L~l~~N~l~g~ip~~~~~l 323 (471)
.. .+++|++|++++|+++|.+|..+... ++|++|++++|++++.+|..+..+
T Consensus 265 ~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 265 PL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp CC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 43 45555555555555555666655543 666666666666666666655544
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2.5e-32 Score=301.73 Aligned_cols=216 Identities=23% Similarity=0.354 Sum_probs=190.7
Q ss_pred cceeeCCCCCEEEEEcCC--CCCCCCccccccccccCCCCCCCEEEc-CCCCCCcc------------------------
Q 042931 95 IGFTCNSAGSIIGLHLSR--DYGSFEEPVQLSQLNFSCFPNLENLTF-QSFPLAGS------------------------ 147 (471)
Q Consensus 95 ~gv~C~~~~~v~~l~l~~--~~~~~~~~~~l~~l~l~~l~~L~~L~L-~~n~l~g~------------------------ 147 (471)
.||+|+..++|++|+|++ +.|.+++. +++|++|+.|+| ++|.++|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~-------l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~ 387 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDA-------IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHY 387 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGG-------GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHH
T ss_pred CceEecCCCCEEEEECccCCCCCcCchH-------HhccccceEeeecccccccccccccccccccccchhHHHHHHHhh
Confidence 999999889999999985 55666654 889999999999 66655444
Q ss_pred ----------------------------------------------------CchhccCCCCCCEEeccCCCCCC-----
Q 042931 148 ----------------------------------------------------IPPEISALSKLQRLDLSSNRLTG----- 170 (471)
Q Consensus 148 ----------------------------------------------------ip~~l~~L~~L~~L~Ls~N~l~g----- 170 (471)
||+.++++++|++|+|++|.++|
T Consensus 388 ~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~ 467 (876)
T 4ecn_A 388 KKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAV 467 (876)
T ss_dssp HHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSS
T ss_pred hhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccc
Confidence 88889999999999999999998
Q ss_pred ------------cCCcccC--CCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCC-CCC-CCcccccCCC------
Q 042931 171 ------------SIPSEIG--NLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQ-LSG-PLPQEIGNLK------ 228 (471)
Q Consensus 171 ------------~iP~~l~--~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~-l~g-~~p~~l~~l~------ 228 (471)
.+|..++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..+++++
T Consensus 468 ~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l 547 (876)
T 4ecn_A 468 DWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTG 547 (876)
T ss_dssp SCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTT
T ss_pred cccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhccccc
Confidence 4999988 99999999999999999999999999999999999998 988 8888776665
Q ss_pred -CCCEEeCCCCcccccccc--ccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCC-CCc
Q 042931 229 -NLMELDLGTNSLIGPIPS--TLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTD-LSY 304 (471)
Q Consensus 229 -~L~~L~Ls~N~l~g~ip~--~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~-L~~ 304 (471)
+|++|+|++|.++ .+|. .++++++|+.|++++|.++ .+| .++++++|+.|++++|++. .+|..+..+++ |+.
T Consensus 548 ~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~ 623 (876)
T 4ecn_A 548 PKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEG 623 (876)
T ss_dssp TTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCE
T ss_pred CCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCE
Confidence 9999999999998 8898 8999999999999999998 788 8899999999999999998 88888999998 999
Q ss_pred ccCCCCcCcccccccccc
Q 042931 305 LDLSCNQFSSSIPNDTTK 322 (471)
Q Consensus 305 L~l~~N~l~g~ip~~~~~ 322 (471)
|++++|+++ .+|..+..
T Consensus 624 L~Ls~N~L~-~lp~~~~~ 640 (876)
T 4ecn_A 624 LGFSHNKLK-YIPNIFNA 640 (876)
T ss_dssp EECCSSCCC-SCCSCCCT
T ss_pred EECcCCCCC-cCchhhhc
Confidence 999999988 77866544
No 6
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=2e-29 Score=277.81 Aligned_cols=215 Identities=37% Similarity=0.625 Sum_probs=173.6
Q ss_pred CCEEEEEcCCC--CCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCC
Q 042931 103 GSIIGLHLSRD--YGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLR 180 (471)
Q Consensus 103 ~~v~~l~l~~~--~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~ 180 (471)
.....|+++.. .+.++.. ++.+++|+.|++++|.+.|.+|..++.+++|++|++++|+++|.+|..+++++
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~-------l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSS-------LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp TTCCEEECCSSEEESCCCGG-------GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred CCCCEEECcCCcccCcccHH-------HhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 34566676642 2333322 67778888888888888888888888888888888888888888888888888
Q ss_pred CCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCcccccccccc------------
Q 042931 181 NLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTL------------ 248 (471)
Q Consensus 181 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l------------ 248 (471)
+|++|+|++|++++.+|..++++++|++|++++|.++|.+|..++++++|+.|++++|.++|.+|..+
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 88888888888888888888888888888888888888888888888888888888888877776543
Q ss_pred ----------------------------------------------------------CCCCCCCEEECCCCcCCCCCcc
Q 042931 249 ----------------------------------------------------------GRLTNLNYMSLSRNMFGGLLPQ 270 (471)
Q Consensus 249 ----------------------------------------------------------~~l~~L~~L~L~~N~l~g~~p~ 270 (471)
+++++|+.|++++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 3346788888888888888888
Q ss_pred cccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 271 EIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 271 ~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
.++++++|+.|+|++|+++|.+|..++.+++|+.||+++|+++|.+|..+..+.
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~ 704 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCC
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCC
Confidence 888888888888888888888888888888888888888888888888776654
No 7
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=6.9e-29 Score=244.71 Aligned_cols=190 Identities=31% Similarity=0.488 Sum_probs=183.6
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCC-Cc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLT-NL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~-~L 206 (471)
++++++|++|++++|.+++.+|..++++++|++|++++|.+++.+|..++++++|++|++++|.+++.+|..+.+++ +|
T Consensus 97 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L 176 (313)
T 1ogq_A 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176 (313)
T ss_dssp GGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC
T ss_pred HhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 207 KNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
++|++++|.+++.+|..+..++ |++|++++|.+++.+|..+..+++|+.|++++|.+++.+|. +..+++|++|++++|
T Consensus 177 ~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N 254 (313)
T 1ogq_A 177 TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNN 254 (313)
T ss_dssp CEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSS
T ss_pred cEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCC
Confidence 9999999999999999999997 99999999999999999999999999999999999987776 888999999999999
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPND 319 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~ 319 (471)
++++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 255 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 255 RIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp CCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 999999999999999999999999999999975
No 8
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=2.3e-27 Score=228.68 Aligned_cols=220 Identities=24% Similarity=0.267 Sum_probs=189.2
Q ss_pred CCCCcccceeeCCCCCEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCC
Q 042931 89 SDHCKWIGFTCNSAGSIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNR 167 (471)
Q Consensus 89 ~~~C~w~gv~C~~~~~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~ 167 (471)
.++|.|.|+.|...+.++.++++... ..++ ..-.++|+.|++++|.+.+..+..|.++++|++|++++|.
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip---------~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 72 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIP---------SNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNK 72 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCC---------SCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccC---------CCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCc
Confidence 47899999999755555667776421 1222 1223679999999999998777789999999999999999
Q ss_pred CCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccc
Q 042931 168 LTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPST 247 (471)
Q Consensus 168 l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 247 (471)
++...+..+.++++|++|++++|.+++..+..+.++++|++|++++|.+++..|..+.++++|++|++++|.+++..+..
T Consensus 73 l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 152 (270)
T 2o6q_A 73 LQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV 152 (270)
T ss_dssp CSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhH
Confidence 99655555689999999999999999877778899999999999999999888888999999999999999999766667
Q ss_pred cCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 248 LGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 248 l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
+..+++|+.|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++....+
T Consensus 153 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 8999999999999999998777789999999999999999998777789999999999999999976543
No 9
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=4.3e-27 Score=230.59 Aligned_cols=228 Identities=25% Similarity=0.298 Sum_probs=194.9
Q ss_pred CCCcccceeeCCCC----------CEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCC--ccCchhccCCC
Q 042931 90 DHCKWIGFTCNSAG----------SIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLA--GSIPPEISALS 156 (471)
Q Consensus 90 ~~C~w~gv~C~~~~----------~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~--g~ip~~l~~L~ 156 (471)
..|.|.+|.|+..+ .++.|+++... ..+++ -.++++++|+.|++++|.+. +.+|..+..++
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 78 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPH------GVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCT------TTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCS
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCH------hHhhccccCCEEECCCCccCcccCccccccccc
Confidence 34899999997532 46666665421 11221 12688999999999999987 44577888899
Q ss_pred CCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCC-CccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeC
Q 042931 157 KLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVP-STLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDL 235 (471)
Q Consensus 157 ~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 235 (471)
+|++|++++|.++ .+|..+.++++|++|++++|.+++..+ ..+.++++|++|++++|.+++..|..+.++++|++|++
T Consensus 79 ~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 9999999999998 578889999999999999999986655 57899999999999999999888899999999999999
Q ss_pred CCCcccc-ccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 236 GTNSLIG-PIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 236 s~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
++|.+++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|+.|++++|++++
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 9999987 688899999999999999999998889999999999999999999998888789999999999999999999
Q ss_pred cccccccccc
Q 042931 315 SIPNDTTKLL 324 (471)
Q Consensus 315 ~ip~~~~~l~ 324 (471)
..|..+..+.
T Consensus 238 ~~~~~~~~~~ 247 (306)
T 2z66_A 238 SKKQELQHFP 247 (306)
T ss_dssp CSSSSCCCCC
T ss_pred cCHHHHHhhh
Confidence 8887766553
No 10
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.1e-25 Score=218.45 Aligned_cols=190 Identities=26% Similarity=0.285 Sum_probs=138.2
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCC-CCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNR-LTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~-l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
++.+++|++|++++|.+.+..|..+..+++|++|++++|. ++...|..+.++++|++|++++|.+++..|..+.++++|
T Consensus 52 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 131 (285)
T 1ozn_A 52 FRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL 131 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCC
Confidence 5667777777777777777667777777777777777776 655446667777777777777777776667777777777
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 207 KNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
++|++++|.+++..+..++++++|++|++++|.+++..+..+..+++|+.|++++|.+++..|..+.++++|++|++++|
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 77777777777655556777777777777777777555556777777777777777777776777777777777777777
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
++++..+..+..+++|+.|++++|++.+..+
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 7776666667777777777777777765443
No 11
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.7e-28 Score=256.38 Aligned_cols=199 Identities=21% Similarity=0.191 Sum_probs=146.1
Q ss_pred CEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCC
Q 042931 104 SIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNL 182 (471)
Q Consensus 104 ~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L 182 (471)
+++.|++++.. ..+++. .++.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++. |. .++|
T Consensus 35 ~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~----~~~L 101 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAA------DLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-LV----GPSI 101 (487)
T ss_dssp GCCEEECCSSCCCCCCGG------GGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-EE----CTTC
T ss_pred CccEEEeeCCcCCCCCHH------HHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-CC----CCCc
Confidence 57777776421 112211 27788899999999998887665 88889999999999888753 32 2677
Q ss_pred cEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccC-CCCCCCEEECCC
Q 042931 183 VYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLG-RLTNLNYMSLSR 261 (471)
Q Consensus 183 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~-~l~~L~~L~L~~ 261 (471)
++|++++|.+++..+. .+++|++|++++|.+++..|..++++++|++|+|++|.+++.+|..+. .+++|+.|+|++
T Consensus 102 ~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 102 ETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp CEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCC
Confidence 7777777777765543 357788888888888877777788888888888888888887777775 678888888888
Q ss_pred CcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccccc
Q 042931 262 NMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTK 322 (471)
Q Consensus 262 N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 322 (471)
|.+++. |. ...+++|+.|+|++|.+++.+| .+..+++|+.|++++|.+++ +|..+..
T Consensus 179 N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 179 NFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp SCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred Cccccc-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 888765 32 3457888888888888876544 47778888888888888875 5655443
No 12
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=7e-26 Score=233.92 Aligned_cols=194 Identities=19% Similarity=0.232 Sum_probs=103.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcc--cCCCCCCcEEEcccCCCCCCCCCc-cCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSE--IGNLRNLVYLNISKNILTGTVPST-LGSLT 204 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~--l~~L~~L~~L~L~~N~l~g~~p~~-l~~l~ 204 (471)
++.+++|++|+|++|.+.+..|..++++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..|.. +.+++
T Consensus 75 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 154 (455)
T 3v47_A 75 FRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR 154 (455)
T ss_dssp TTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCT
T ss_pred ccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCC
Confidence 444555555555555555555555555555555555555555443333 555555555555555555544444 45555
Q ss_pred CcCEEEccCCCCCCCCcccccCC----------------------------------CCCCEEeCCCCccccccccccCC
Q 042931 205 NLKNMGLSYNQLSGPLPQEIGNL----------------------------------KNLMELDLGTNSLIGPIPSTLGR 250 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~~p~~l~~l----------------------------------~~L~~L~Ls~N~l~g~ip~~l~~ 250 (471)
+|++|++++|.+++..|..+.++ ++|++|++++|.+++.+|..+..
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 55555555555555444433222 33444444444433322221110
Q ss_pred ---------------------------------------CCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCC
Q 042931 251 ---------------------------------------LTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGP 291 (471)
Q Consensus 251 ---------------------------------------l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ 291 (471)
.++|+.|++++|.+++..|..++.+++|++|++++|++.+.
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 13455555555555555666666666666666666666666
Q ss_pred CchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 292 IPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 292 ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
.|..+..+++|+.|++++|.+++..|..+.
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 344 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFE 344 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGT
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhc
Confidence 666666666666666666666555454443
No 13
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.1e-25 Score=216.37 Aligned_cols=195 Identities=22% Similarity=0.169 Sum_probs=177.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCC-CCCCCCCccCCCCCc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNI-LTGTVPSTLGSLTNL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~-l~g~~p~~l~~l~~L 206 (471)
.+-.++|+.|++++|.+.+..+..+..+++|++|++++|.+++..|..+.++++|++|++++|. +....|..+.++++|
T Consensus 28 ~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L 107 (285)
T 1ozn_A 28 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRL 107 (285)
T ss_dssp TTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTC
T ss_pred cCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCC
Confidence 3445789999999999998877889999999999999999998889999999999999999998 776668899999999
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 207 KNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
++|++++|.+++..|..+.++++|++|++++|.+++..+..++++++|+.|++++|.+++..+..+..+++|++|++++|
T Consensus 108 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 187 (285)
T 1ozn_A 108 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187 (285)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC
Confidence 99999999999888899999999999999999999877777999999999999999999776777999999999999999
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCcccccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTK 322 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 322 (471)
.+.+..|..+..+++|+.|++++|++++..|..+..
T Consensus 188 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 223 (285)
T 1ozn_A 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223 (285)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred cccccCHhHccCcccccEeeCCCCcCCcCCHHHccc
Confidence 999999999999999999999999999865554443
No 14
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=2.1e-25 Score=212.56 Aligned_cols=176 Identities=28% Similarity=0.363 Sum_probs=107.9
Q ss_pred EEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCC
Q 042931 137 LTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQL 216 (471)
Q Consensus 137 L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 216 (471)
++++++.+. .+|..+. ++|+.|+|++|.+++..|..+.++++|++|+|++|.+++..|..+.++++|++|++++|.+
T Consensus 19 l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 95 (251)
T 3m19_A 19 VDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95 (251)
T ss_dssp EECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcc
Confidence 334444443 3444333 3566666666666655555566666666666666666665555566666666666666666
Q ss_pred CCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhh
Q 042931 217 SGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTL 296 (471)
Q Consensus 217 ~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l 296 (471)
++..+..+.++++|++|+|++|.+++..+..+.++++|+.|++++|.+++..+..++.+++|++|++++|++++..+..+
T Consensus 96 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 175 (251)
T 3m19_A 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred cccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHH
Confidence 65555556666666666666666665444455666666666666666665555556666666666666666666555566
Q ss_pred hcCCCCCcccCCCCcCccc
Q 042931 297 GLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 297 ~~l~~L~~L~l~~N~l~g~ 315 (471)
..+++|+.|++++|++.+.
T Consensus 176 ~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 176 DRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCTTCCEEECCSCCBCTT
T ss_pred hCCCCCCEEEeeCCceeCC
Confidence 6666666666666666654
No 15
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=1.4e-25 Score=222.50 Aligned_cols=183 Identities=25% Similarity=0.357 Sum_probs=174.2
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCC---------CCCCcEEEcccCCCCCCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGN---------LRNLVYLNISKNILTGTVPS 198 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~---------L~~L~~L~L~~N~l~g~~p~ 198 (471)
++.+++|++|+|++|.+. .+|..++++++|++|++++|++.+.+|..++. +++|++|+|++|.++ .+|.
T Consensus 123 ~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~ 200 (328)
T 4fcg_A 123 MQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPA 200 (328)
T ss_dssp GGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCG
T ss_pred HhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchH
Confidence 788999999999999998 89999999999999999999999999988765 999999999999999 8999
Q ss_pred ccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCC
Q 042931 199 TLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNL 278 (471)
Q Consensus 199 ~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L 278 (471)
.++++++|++|++++|.++ .+|..++++++|++|++++|.+.+.+|..++++++|+.|++++|++.+.+|..++++++|
T Consensus 201 ~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 201 SIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp GGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred hhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 9999999999999999999 477789999999999999999999999999999999999999999999999999999999
Q ss_pred CEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCc
Q 042931 279 IELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 279 ~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~ 313 (471)
++|++++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 280 ~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999877664
No 16
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=5.5e-25 Score=212.24 Aligned_cols=188 Identities=25% Similarity=0.285 Sum_probs=160.0
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|++|++++|.+.+ + +.++.+++|++|++++|.+++..|..++++++|++|++++|++++..|..+.++++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 6678889999999998876 3 4788899999999999999877677788899999999999999877777788999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..|..++++++|++|++++|.+++..|..++.+++|+.|++++|.+++..|..+..+++|+.|++++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 99999999987777778889999999999999987777778889999999999999998777778889999999999998
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
+.+.. ++|+.++++.|.++|.+|.+++.+.
T Consensus 217 ~~~~~-------~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 217 WDCTC-------PGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp BCCCT-------TTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred ccccC-------cHHHHHHHHHHhCCCcccCcccccC
Confidence 87654 4578888889999999998877654
No 17
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=1e-24 Score=225.62 Aligned_cols=192 Identities=22% Similarity=0.220 Sum_probs=157.2
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
|+++++|+.|+|++|.+.+..|..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..+.++++|+
T Consensus 95 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 174 (452)
T 3zyi_A 95 FRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM 174 (452)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred cCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCccc
Confidence 78889999999999999888888899999999999999999876666688899999999999998866666788888888
Q ss_pred EEEccCCCCCCCCcc-cccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 208 NMGLSYNQLSGPLPQ-EIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
+|++++|+..+.+|. .+.++++|++|++++|.+++ +| .+..+++|+.|++++|.+++..|..|.++++|+.|++++|
T Consensus 175 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 252 (452)
T 3zyi_A 175 RLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNS 252 (452)
T ss_dssp EEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTS
T ss_pred EEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCC
Confidence 888888544445544 57788888888888888875 44 4778888888888888888888888888888888888888
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
++.+..|..+..+++|+.|++++|++++..+..+.
T Consensus 253 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred cCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 88888888888888888888888888765554443
No 18
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-24 Score=233.41 Aligned_cols=115 Identities=18% Similarity=0.217 Sum_probs=83.1
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|+|++|.+.+..|..|+.+++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..|+++++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 45567777777777777776666777777777777777777776666677777777777777777754444567777777
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCcccc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIG 242 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 242 (471)
+|+|++|.+++..|..++++++|++|++++|.+++
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 77777777777666677777777777777777664
No 19
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.4e-24 Score=207.91 Aligned_cols=189 Identities=25% Similarity=0.307 Sum_probs=150.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|++|++++|.+.+..+..+.++++|++|++++|.+++..|..+.++++|++|++++|.+.+..+..+.++++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 127 (276)
T 2z62_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127 (276)
T ss_dssp TTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred hccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCC
Confidence 67788888888888888877677788888888888888888877777788888888888888888876666788888888
Q ss_pred EEEccCCCCCC-CCcccccCCCCCCEEeCCCCccccccccccCCCCCCC----EEECCCCcCCCCCcccccCCCCCCEEe
Q 042931 208 NMGLSYNQLSG-PLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLN----YMSLSRNMFGGLLPQEIGNLKNLIELN 282 (471)
Q Consensus 208 ~L~L~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~----~L~L~~N~l~g~~p~~l~~l~~L~~L~ 282 (471)
+|++++|.+++ .+|..++++++|++|++++|.+++..+..+..+++|+ .|++++|.+++..+..+ ...+|++|+
T Consensus 128 ~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~ 206 (276)
T 2z62_A 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELA 206 (276)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEE
T ss_pred EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEE
Confidence 88888888876 3688888888888888888888877666776666666 78888888876544443 345788888
Q ss_pred ccCCcCcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 283 VGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 283 L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
+++|++++..+..+..+++|+.|++++|++++..|
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88888887766667888888888888888887654
No 20
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.1e-23 Score=203.13 Aligned_cols=187 Identities=27% Similarity=0.341 Sum_probs=170.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.+.. + +.+..+++|++|++++|.+++ + +.++++++|++|++++|.+++..|..+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 4557889999999998863 3 458899999999999999986 3 4799999999999999999988888899999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..|..++++++|++|++++|.+++..|..++++++|+.|++++|++++..|..++.+++|++|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 99999999998877889999999999999999998777778999999999999999998888788999999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
+++..|..+..+++|+.|++++|++.+..|.
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9998888899999999999999999988763
No 21
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.1e-24 Score=197.59 Aligned_cols=185 Identities=24% Similarity=0.284 Sum_probs=113.7
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCC
Q 042931 90 DHCKWIGFTCNSAGSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLT 169 (471)
Q Consensus 90 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~ 169 (471)
..|.|.+|.|+..+- ..+..+-.++|++|++++|.+.+..+..+..+++|++|++++|+++
T Consensus 5 C~C~~~~v~c~~~~l-------------------~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 65 (208)
T 2o6s_A 5 CSCSGTTVECYSQGR-------------------TSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ 65 (208)
T ss_dssp CEEETTEEECCSSCC-------------------SSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC
T ss_pred CEECCCEEEecCCCc-------------------cCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC
Confidence 458999999975431 1111222356777777777776555555667777777777777776
Q ss_pred CcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccC
Q 042931 170 GSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLG 249 (471)
Q Consensus 170 g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 249 (471)
+..+..+.++++|++|++++|.+++..+..+.++++|++|++++|.+++..+..+.++++|++|++++|.+++..+..+.
T Consensus 66 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 145 (208)
T 2o6s_A 66 SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc
Confidence 54444456677777777777777655555566666777777777766655555566666666666666666654444456
Q ss_pred CCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCC
Q 042931 250 RLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLT 300 (471)
Q Consensus 250 ~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~ 300 (471)
++++|+.|++++|.+.+. +++|+.|+++.|+++|.+|..++.++
T Consensus 146 ~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred cCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCcccc
Confidence 666666666666655432 33455555566666666665555443
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.92 E-value=1.2e-25 Score=242.53 Aligned_cols=190 Identities=19% Similarity=0.322 Sum_probs=176.5
Q ss_pred cCCCCCCCEEEcCCCCCCcc-----------------Cchhcc--CCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcc
Q 042931 128 FSCFPNLENLTFQSFPLAGS-----------------IPPEIS--ALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNIS 188 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~-----------------ip~~l~--~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~ 188 (471)
++++++|++|+|++|.++|. +|+.++ ++++|++|+|++|.+.|.+|..++++++|++|+++
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 78899999999999999997 999999 99999999999999999999999999999999999
Q ss_pred cCC-CCC-CCCCccCCC------CCcCEEEccCCCCCCCCcc--cccCCCCCCEEeCCCCccccccccccCCCCCCCEEE
Q 042931 189 KNI-LTG-TVPSTLGSL------TNLKNMGLSYNQLSGPLPQ--EIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMS 258 (471)
Q Consensus 189 ~N~-l~g-~~p~~l~~l------~~L~~L~L~~N~l~g~~p~--~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ 258 (471)
+|+ ++| .+|..++++ ++|++|++++|.++ .+|. .++++++|++|++++|.++|.+| .++++++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 998 899988887 99999999999999 8998 99999999999999999999999 899999999999
Q ss_pred CCCCcCCCCCcccccCCCC-CCEEeccCCcCcCCCchhhhcCC--CCCcccCCCCcCccccccccc
Q 042931 259 LSRNMFGGLLPQEIGNLKN-LIELNVGSNSLIGPIPSTLGLLT--DLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 259 L~~N~l~g~~p~~l~~l~~-L~~L~L~~N~l~g~ip~~l~~l~--~L~~L~l~~N~l~g~ip~~~~ 321 (471)
+++|.++ .+|..+.++++ |++|++++|.++ .+|..+..++ +|+.|++++|++++.+|..+.
T Consensus 360 L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp CCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred CCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 9999998 78888999998 999999999988 7888777655 899999999999998887665
No 23
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.91 E-value=8.7e-24 Score=209.58 Aligned_cols=218 Identities=26% Similarity=0.374 Sum_probs=147.8
Q ss_pred CCcccceeeCCCC----------CEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCE
Q 042931 91 HCKWIGFTCNSAG----------SIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQR 160 (471)
Q Consensus 91 ~C~w~gv~C~~~~----------~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~ 160 (471)
.|+|..+.|...+ .++.|++++.. +. .+..-.++++++|++|++++|.+.+..|..++++++|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~--i~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNND--IS---ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSC--CC---EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCc--CC---ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 3789999996422 34555555321 10 011113788899999999999999888888999999999
Q ss_pred EeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCC--CCCcccccCCCCCCEEeCCCC
Q 042931 161 LDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLS--GPLPQEIGNLKNLMELDLGTN 238 (471)
Q Consensus 161 L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~--g~~p~~l~~l~~L~~L~Ls~N 238 (471)
|++++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++ +..|..+..+ +|++|++++|
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 999999988 5777665 78999999999988666667888999999999998885 3566666666 6666666666
Q ss_pred ccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccc
Q 042931 239 SLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 239 ~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
.+++ +|..+. ++|+.|++++|.+++..|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|+++ .+|.
T Consensus 183 ~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 183 KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 6553 444332 45566666666665555555556666666666666665555555556666666666666655 4554
Q ss_pred ccc
Q 042931 319 DTT 321 (471)
Q Consensus 319 ~~~ 321 (471)
.+.
T Consensus 259 ~l~ 261 (332)
T 2ft3_A 259 GLP 261 (332)
T ss_dssp TGG
T ss_pred hhh
Confidence 443
No 24
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.91 E-value=9e-24 Score=217.74 Aligned_cols=192 Identities=21% Similarity=0.225 Sum_probs=154.2
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++++++|+.|+|++|.+.+..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..|.++++|+
T Consensus 84 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 163 (440)
T 3zyj_A 84 FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 163 (440)
T ss_dssp TSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred hhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC
Confidence 77888899999999988887778888899999999999998865556788889999999999988866666788888888
Q ss_pred EEEccCCCCCCCCcc-cccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 208 NMGLSYNQLSGPLPQ-EIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
+|++++|+..+.+|. .+.++++|++|++++|.++ .+| .+..+++|+.|++++|.+++..|..|.++++|+.|++++|
T Consensus 164 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 164 RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 888888554444444 6778888888888888877 455 4778888888888888888777888888888888888888
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
++.+..|..+..+++|+.|+|++|++++..+..+.
T Consensus 242 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred ceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 88888788888888888888888888765554443
No 25
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.91 E-value=5.3e-24 Score=219.82 Aligned_cols=194 Identities=24% Similarity=0.284 Sum_probs=145.0
Q ss_pred cCCCCCCCEEEcCCCCCCccCchh--ccCCCCCCEEeccCCCCCCcCCcc-cCCCCCCcEEEcccCCCCCCCCCccCCC-
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPE--ISALSKLQRLDLSSNRLTGSIPSE-IGNLRNLVYLNISKNILTGTVPSTLGSL- 203 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~--l~~L~~L~~L~Ls~N~l~g~iP~~-l~~L~~L~~L~L~~N~l~g~~p~~l~~l- 203 (471)
++.+++|++|++++|.+.+.+|.. ++.+++|++|+|++|.+++..|.. +.++++|++|++++|.+++..|..+..+
T Consensus 99 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 178 (455)
T 3v47_A 99 FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQ 178 (455)
T ss_dssp TTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGT
T ss_pred ccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccc
Confidence 556666677777766666655544 666666666776666666655554 5666666666666666665555433322
Q ss_pred --------------------------------------------------------------------------------
Q 042931 204 -------------------------------------------------------------------------------- 203 (471)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (471)
T Consensus 179 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 258 (455)
T 3v47_A 179 GKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGH 258 (455)
T ss_dssp TCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTC
T ss_pred cccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccch
Confidence
Q ss_pred ----------------CCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCC
Q 042931 204 ----------------TNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGL 267 (471)
Q Consensus 204 ----------------~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ 267 (471)
++|++|++++|.+++.+|..++++++|++|++++|.+++..|..+.++++|++|++++|.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 338 (455)
T 3v47_A 259 TNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSI 338 (455)
T ss_dssp CSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred hhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCc
Confidence 3566666666666667788888899999999999999888888888899999999999999888
Q ss_pred CcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 268 LPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 268 ~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
.|..+.++++|++|++++|++++..|..+..+++|++|++++|++++..+..+.
T Consensus 339 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 392 (455)
T 3v47_A 339 DSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFD 392 (455)
T ss_dssp CGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhc
Confidence 888888899999999999999888888888899999999999998874444333
No 26
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.91 E-value=1.5e-23 Score=207.52 Aligned_cols=219 Identities=22% Similarity=0.303 Sum_probs=150.2
Q ss_pred CCCcccceeeCCC----------CCEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCC
Q 042931 90 DHCKWIGFTCNSA----------GSIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKL 158 (471)
Q Consensus 90 ~~C~w~gv~C~~~----------~~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L 158 (471)
..|+|..+.|... ..++.|+++... ..+ ..-.++++++|++|++++|.+.+..|..++++++|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEI------KDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCB------CTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEe------ChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCC
Confidence 3578999999642 134445554311 111 11137788888888888888888778888888888
Q ss_pred CEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCC--CCcccccCCCCCCEEeCC
Q 042931 159 QRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSG--PLPQEIGNLKNLMELDLG 236 (471)
Q Consensus 159 ~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~l~~l~~L~~L~Ls 236 (471)
++|++++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.+.. ..|..+.++++|++|+++
T Consensus 103 ~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 103 ERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp CEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred CEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 88888888887 5666554 677777777777776666667777777777777777742 556667777777777777
Q ss_pred CCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccc
Q 042931 237 TNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSI 316 (471)
Q Consensus 237 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~i 316 (471)
+|.++. +|..+. ++|+.|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|+.|++++|+++ .+
T Consensus 180 ~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 180 DTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 777663 554443 56777777777776666666777777777777777776666666667777777777777766 45
Q ss_pred ccccc
Q 042931 317 PNDTT 321 (471)
Q Consensus 317 p~~~~ 321 (471)
|..+.
T Consensus 256 p~~l~ 260 (330)
T 1xku_A 256 PGGLA 260 (330)
T ss_dssp CTTTT
T ss_pred Chhhc
Confidence 55443
No 27
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.91 E-value=6.2e-24 Score=215.30 Aligned_cols=189 Identities=18% Similarity=0.181 Sum_probs=140.7
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|++|++++|.+.+..|..+..+++|++|+|++|.+++..|..++++++|++|++++|.++...+..+.++++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 45677888888888888776666788888888888888888876677778888888888888888744344467788888
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCC-------------------------------------
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGR------------------------------------- 250 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~------------------------------------- 250 (471)
+|++++|.+++..|..+.++++|++|++++|.+++.-...+.+
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~ 224 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 224 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccc
Confidence 8888888887777777788888888888888776532222211
Q ss_pred CCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccc
Q 042931 251 LTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPND 319 (471)
Q Consensus 251 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~ 319 (471)
.++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|..+..+++|+.|++++|++++ +|..
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~ 290 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLY 290 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECS
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcc
Confidence 13566666677766653 467788888899999888888888888888889999998888876 3443
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=4.8e-25 Score=243.71 Aligned_cols=190 Identities=21% Similarity=0.312 Sum_probs=174.6
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEec-cCCCCCCc---------------------------------------
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDL-SSNRLTGS--------------------------------------- 171 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~L-s~N~l~g~--------------------------------------- 171 (471)
.+++.|+|+++++.|.+|+.+++|++|++|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 35789999999999999999999999999999 77755443
Q ss_pred -------------------------------------CCcccCCCCCCcEEEcccCCCCC-----------------CCC
Q 042931 172 -------------------------------------IPSEIGNLRNLVYLNISKNILTG-----------------TVP 197 (471)
Q Consensus 172 -------------------------------------iP~~l~~L~~L~~L~L~~N~l~g-----------------~~p 197 (471)
+|..++++++|++|+|++|.++| .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 88999999999999999999998 399
Q ss_pred CccC--CCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCc-ccc-ccccccCCCC-------CCCEEECCCCcCCC
Q 042931 198 STLG--SLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNS-LIG-PIPSTLGRLT-------NLNYMSLSRNMFGG 266 (471)
Q Consensus 198 ~~l~--~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g-~ip~~l~~l~-------~L~~L~L~~N~l~g 266 (471)
+.++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..+++++ +|+.|++++|.++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 9988 99999999999999999999999999999999999998 999 8998777665 9999999999999
Q ss_pred CCcc--cccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccccccccc
Q 042931 267 LLPQ--EIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLLY 325 (471)
Q Consensus 267 ~~p~--~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 325 (471)
.+|. .++++++|+.|++++|++. .+| .++.+++|+.|++++|+++ .+|..+..+..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~ 619 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTD 619 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECT
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccc
Confidence 8998 9999999999999999998 888 8999999999999999999 88887766543
No 29
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=216.73 Aligned_cols=213 Identities=18% Similarity=0.212 Sum_probs=174.1
Q ss_pred CCCCCcccceeeCCCC-CEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCC
Q 042931 88 SSDHCKWIGFTCNSAG-SIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSN 166 (471)
Q Consensus 88 ~~~~C~w~gv~C~~~~-~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N 166 (471)
....|.|.|+ |+..+ +++ .++ -+-.++|++|++++|.+.+..+..+.++++|++|++++|
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~---------~iP---------~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLN---------SIP---------SGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp -CCEECTTSE-EECCSTTCS---------SCC---------TTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCCCCCeE-eeCCCCCcc---------ccc---------ccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 4567999998 76322 111 111 222368999999999998876668999999999999999
Q ss_pred CCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcc--cccCCCCCCEEeCCCCc-cccc
Q 042931 167 RLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQ--EIGNLKNLMELDLGTNS-LIGP 243 (471)
Q Consensus 167 ~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~l~~l~~L~~L~Ls~N~-l~g~ 243 (471)
.+++..|..++++++|++|++++|.+++..+..+.++++|++|++++|.++ .+|. .+.++++|++|++++|+ +.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~ 165 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKI 165 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEE
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCcccccc
Confidence 999877888999999999999999999655555899999999999999998 4554 78899999999999995 6655
Q ss_pred cccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccc
Q 042931 244 IPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDT 320 (471)
Q Consensus 244 ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~ 320 (471)
.|..++++++|+.|++++|.+++..|..+.++++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+
T Consensus 166 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 166 QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp CTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred CHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccc
Confidence 57789999999999999999999889999999999999999999864444445668999999999999988655443
No 30
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.90 E-value=2.6e-24 Score=211.67 Aligned_cols=182 Identities=21% Similarity=0.255 Sum_probs=137.1
Q ss_pred CCCCCCEEEcCCCCCCccCchhc--cCCCCCCEEeccCCCCCCcCCcccCCC-----CCCcEEEcccCCCCCCCCCccCC
Q 042931 130 CFPNLENLTFQSFPLAGSIPPEI--SALSKLQRLDLSSNRLTGSIPSEIGNL-----RNLVYLNISKNILTGTVPSTLGS 202 (471)
Q Consensus 130 ~l~~L~~L~L~~n~l~g~ip~~l--~~L~~L~~L~Ls~N~l~g~iP~~l~~L-----~~L~~L~L~~N~l~g~~p~~l~~ 202 (471)
++++|++|++++|.+++.+|..+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..+++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 47788888888888888888776 7788888888888888765 7767666 78888888888888777778888
Q ss_pred CCCcCEEEccCCCCCCC--Ccccc--cCCCCCCEEeCCCCcccc--ccc-cccCCCCCCCEEECCCCcCCCCCc-ccccC
Q 042931 203 LTNLKNMGLSYNQLSGP--LPQEI--GNLKNLMELDLGTNSLIG--PIP-STLGRLTNLNYMSLSRNMFGGLLP-QEIGN 274 (471)
Q Consensus 203 l~~L~~L~L~~N~l~g~--~p~~l--~~l~~L~~L~Ls~N~l~g--~ip-~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~ 274 (471)
+++|++|++++|++.+. +|..+ +++++|++|++++|.+++ .++ ..+.++++|++|++++|.+++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 88888888888887765 33444 777888888888888773 233 334567788888888888887664 44556
Q ss_pred CCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccc
Q 042931 275 LKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 275 l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
+++|++|++++|+++ .+|..+. ++|+.|++++|++++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 778888888888877 6676665 6788888888888765
No 31
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.90 E-value=7.4e-24 Score=207.49 Aligned_cols=188 Identities=24% Similarity=0.314 Sum_probs=173.7
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCC-cccCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIP-SEIGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP-~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
+..+++|++|++++|.+. .+|..+..+++|++|++++|.+++..+ ..+.++++|++|++++|.+.+..|..+.++++|
T Consensus 74 ~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 152 (306)
T 2z66_A 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 152 (306)
T ss_dssp HHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC
T ss_pred cccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC
Confidence 456899999999999987 478889999999999999999987554 578999999999999999999999999999999
Q ss_pred CEEEccCCCCCC-CCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccC
Q 042931 207 KNMGLSYNQLSG-PLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGS 285 (471)
Q Consensus 207 ~~L~L~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~ 285 (471)
++|++++|.+++ .+|..+..+++|++|++++|.+++..|..+.++++|+.|++++|.+++..+..+..+++|++|++++
T Consensus 153 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 232 (306)
T 2z66_A 153 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 232 (306)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTT
T ss_pred CEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCC
Confidence 999999999987 5888999999999999999999998899999999999999999999988777899999999999999
Q ss_pred CcCcCCCchhhhcCC-CCCcccCCCCcCcccc
Q 042931 286 NSLIGPIPSTLGLLT-DLSYLDLSCNQFSSSI 316 (471)
Q Consensus 286 N~l~g~ip~~l~~l~-~L~~L~l~~N~l~g~i 316 (471)
|++.+..|..+..++ +|+.|++++|++++..
T Consensus 233 N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 233 NHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp SCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 999999999999884 9999999999998754
No 32
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=217.32 Aligned_cols=187 Identities=22% Similarity=0.256 Sum_probs=142.3
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
|.++++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|+
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 131 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK 131 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCC
Confidence 66777788888877777777777777777888888887777754445567777888888888877777777777778888
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..|..+.++++|++|++++|.+++..+..+.++++|+.|++++|.+++..+..+..+++|++|++++|.
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 88888877777677777777788888888777776666667777788888888877777666677777788888888777
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
+.+.+|.......+|+.|++++|++++
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~~ 238 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLTA 238 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCCS
T ss_pred cccccCcccccCccccEEECcCCcccc
Confidence 777777666666678888888888774
No 33
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.2e-22 Score=197.88 Aligned_cols=181 Identities=25% Similarity=0.257 Sum_probs=162.5
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
.++++.|+|++|.+.+..|..+..+++|++|+|++|.+++ +|.. +.+++|++|++++|+++ .+|..+..+++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 3689999999999998888899999999999999999986 4433 78999999999999998 7888999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcC
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIG 290 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g 290 (471)
+++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|+++
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~- 185 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-
Confidence 9999999777788999999999999999999877777889999999999999999766666788999999999999998
Q ss_pred CCchhhhcCCCCCcccCCCCcCccc
Q 042931 291 PIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 291 ~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
.+|..+....+|+.+++++|++...
T Consensus 186 ~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 186 TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ccChhhcccccCCeEEeCCCCccCc
Confidence 6788888888999999999998754
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.90 E-value=3.7e-24 Score=226.29 Aligned_cols=182 Identities=21% Similarity=0.257 Sum_probs=125.2
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|++|++++|.+++..|..|.++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..++++++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 56777777777777666667777777777777777777666666777777777777777777666666777777777777
Q ss_pred cCCCCCC-CCcccccCCCCCCEEeCCCCccccccc-cccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 212 SYNQLSG-PLPQEIGNLKNLMELDLGTNSLIGPIP-STLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 212 ~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
++|.+++ .+|..++++++|++|++++|.+.+.+| ..+.++++|++|++++|.+++.+|..++++++|++|+++.|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 7777765 355667777777777777777555555 46777777777777777777767777777777777777666654
Q ss_pred CCCchh-hhcCCCCCcccCCCCcCcc
Q 042931 290 GPIPST-LGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 290 g~ip~~-l~~l~~L~~L~l~~N~l~g 314 (471)
.+|.. +..+++|++|++++|++++
T Consensus 186 -~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 -FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp -THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred -ccchhhHhhcccccEEEccCCcccc
Confidence 33333 3456666677777666665
No 35
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.90 E-value=6.5e-23 Score=212.05 Aligned_cols=191 Identities=23% Similarity=0.236 Sum_probs=173.5
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|+.|+|++|++.+..|..|.++++|++|+|++|.+++..|..+.++++|++|+|++|.+++..+..+.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 68999999999999999999999999999999999999888899999999999999999999777777999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCcccccccc-ccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPS-TLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIG 290 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g 290 (471)
++|.+++..+..+.++++|++|++++|+..+.+|. .+.++++|++|++++|++++. | .+..+++|++|++++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 99999976667899999999999999665566665 689999999999999999864 5 58899999999999999999
Q ss_pred CCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 291 PIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 291 ~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
..|..+..+++|+.|++++|++++..|..+..+.
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 9999999999999999999999988777665443
No 36
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=7.2e-23 Score=199.42 Aligned_cols=189 Identities=26% Similarity=0.255 Sum_probs=169.1
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++++++++.++++++.++ .+|..+. +++++|+|++|.+++..|..+.++++|++|+|++|.+++. |.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 567889999999999987 5777664 6999999999999988888999999999999999999854 433 8999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.++ .+|..+..+++|++|++++|++++..|..|.++++|++|++++|++++..+..+..+++|+.|++++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 789999999999999999999998777889999999999999999998777778899999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccccccccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l 323 (471)
+++..+..+..+++|+.|++++|+++ .+|..+...
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~ 194 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGS 194 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhccc
Confidence 99777777889999999999999998 577665543
No 37
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.2e-22 Score=193.68 Aligned_cols=187 Identities=28% Similarity=0.323 Sum_probs=165.7
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
.+.+.++++++.++ .+|..+. ++|++|+|++|++++..+..+.++++|++|++++|.++...+..+.++++|++|++
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 35789999999988 4777654 68999999999999766678999999999999999999666666799999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGP 291 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ 291 (471)
++|.+++..+..+.++++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999977777889999999999999999988888899999999999999999987777789999999999999999988
Q ss_pred CchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 292 IPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 292 ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
.+..+..+++|+.|++++|++++..+..+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhc
Confidence 888899999999999999999865444343
No 38
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=3.2e-23 Score=200.00 Aligned_cols=189 Identities=23% Similarity=0.241 Sum_probs=167.7
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|++|++++|.+.+..+..+.++++|++|++++|.+++..+..+.++++|++|++++|.+++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57999999999999887779999999999999999999777778999999999999999999888889999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCcccc-ccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCC----EEeccCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIG-PIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLI----ELNVGSN 286 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~----~L~L~~N 286 (471)
++|.+++..+..++++++|++|++++|.+++ .+|..++++++|+.|++++|.+++..+..+..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9999998777789999999999999999987 4799999999999999999999988777887777776 8999999
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
.+.+..+..+. ..+|+.|++++|++++..+..+.
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~ 221 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFD 221 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTT
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhc
Confidence 99876665554 45899999999999865444333
No 39
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.90 E-value=5e-24 Score=209.65 Aligned_cols=180 Identities=22% Similarity=0.223 Sum_probs=159.8
Q ss_pred CCCCCCCEEEcCCCCCCccCchhccCC-----CCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCC--CCCcc-
Q 042931 129 SCFPNLENLTFQSFPLAGSIPPEISAL-----SKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGT--VPSTL- 200 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~ip~~l~~L-----~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~--~p~~l- 200 (471)
+.+++|++|++++|.+++. |..++.+ ++|++|+|++|++++..|..++++++|++|++++|++.+. +|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 7899999999999999988 8888877 9999999999999988889999999999999999998876 34455
Q ss_pred -CCCCCcCEEEccCCCCCC--CCc-ccccCCCCCCEEeCCCCccccccc-cccCCCCCCCEEECCCCcCCCCCcccccCC
Q 042931 201 -GSLTNLKNMGLSYNQLSG--PLP-QEIGNLKNLMELDLGTNSLIGPIP-STLGRLTNLNYMSLSRNMFGGLLPQEIGNL 275 (471)
Q Consensus 201 -~~l~~L~~L~L~~N~l~g--~~p-~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l 275 (471)
.++++|++|++++|.+++ .++ ..+.++++|++|++++|.+++.+| ..+..+++|++|++++|.++ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 899999999999999983 223 334688999999999999999875 56677899999999999998 7888776
Q ss_pred CCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 276 KNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 276 ~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
++|++|++++|++++. |. +..+++|+.|++++|++++
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999999977 66 8999999999999999986
No 40
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.90 E-value=1.9e-23 Score=223.64 Aligned_cols=196 Identities=23% Similarity=0.223 Sum_probs=177.3
Q ss_pred ccCCCCCCCEEEcCCCCCCcc--CchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCC-CccCCC
Q 042931 127 NFSCFPNLENLTFQSFPLAGS--IPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVP-STLGSL 203 (471)
Q Consensus 127 ~l~~l~~L~~L~L~~n~l~g~--ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p-~~l~~l 203 (471)
.++.+++|+.|++++|.+++. +|..+..+++|++|++++|.+++ +|..+.++++|++|++++|.+.+..| ..+.++
T Consensus 345 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 423 (606)
T 3vq2_A 345 KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423 (606)
T ss_dssp CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC
T ss_pred hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcc
Confidence 466788999999999998876 58889999999999999999885 77889999999999999999998877 689999
Q ss_pred CCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCcccc-ccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEe
Q 042931 204 TNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIG-PIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELN 282 (471)
Q Consensus 204 ~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 282 (471)
++|++|++++|.+++..|..+.++++|++|++++|.+++ .+|..++.+++|+.|++++|.+++..|..+.++++|++|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 999999999999999999999999999999999999998 4788999999999999999999998899999999999999
Q ss_pred ccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 283 VGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 283 L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
+++|++++.+|..+..+++|+.|++++|+++ .+|..+..+.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~ 544 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFP 544 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSC
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhc
Confidence 9999999999999999999999999999998 6777655443
No 41
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3e-22 Score=190.68 Aligned_cols=193 Identities=25% Similarity=0.255 Sum_probs=165.4
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCC
Q 042931 90 DHCKWIGFTCNSAGSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLT 169 (471)
Q Consensus 90 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~ 169 (471)
+||.|.|++|..... .+++++.. ++.+.-+-.++++.|+|++|.+.+..|..+.++++|++|+|++|.++
T Consensus 3 ~Cp~~~gC~C~~~~~--~l~~~~~~--------l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 72 (251)
T 3m19_A 3 TCETVTGCTCNEGKK--EVDCQGKS--------LDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ 72 (251)
T ss_dssp -CHHHHSSEEEGGGT--EEECTTCC--------CSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred cCCCCCceEcCCCCe--EEecCCCC--------ccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC
Confidence 588999999954322 34444311 11111222368999999999999988889999999999999999999
Q ss_pred CcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccC
Q 042931 170 GSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLG 249 (471)
Q Consensus 170 g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 249 (471)
+..|..+.++++|++|+|++|.+++..|..+..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..++
T Consensus 73 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 152 (251)
T 3m19_A 73 TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152 (251)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred ccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcC
Confidence 88888899999999999999999988888899999999999999999977777789999999999999999987777899
Q ss_pred CCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCC
Q 042931 250 RLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPI 292 (471)
Q Consensus 250 ~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~i 292 (471)
.+++|++|++++|++++..|..+..+++|+.|++++|.+.+..
T Consensus 153 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 153 KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 9999999999999999888888999999999999999998763
No 42
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.89 E-value=5.1e-23 Score=220.25 Aligned_cols=197 Identities=23% Similarity=0.222 Sum_probs=159.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCchh-ccCCCCCCEEeccCCCCCCcC--CcccCCCCCCcEEEcccCCCCCCCCCccCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPE-ISALSKLQRLDLSSNRLTGSI--PSEIGNLRNLVYLNISKNILTGTVPSTLGSLT 204 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~-l~~L~~L~~L~Ls~N~l~g~i--P~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~ 204 (471)
++.+++|+.|++++|.+.+.+|.. +..+++|++|++++|.+++.. |..++++++|++|++++|.+.+..|..+.+++
T Consensus 321 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 321 ASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 667788888888888888877765 788888888888888888655 67788888888888888888877788888888
Q ss_pred CcCEEEccCCCCCCCCccc-ccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCC---CcccccCCCCCCE
Q 042931 205 NLKNMGLSYNQLSGPLPQE-IGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGL---LPQEIGNLKNLIE 280 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~---~p~~l~~l~~L~~ 280 (471)
+|++|++++|.+++..|.. +.++++|++|++++|.+++..|..++.+++|++|++++|.+++. .+..+..+++|++
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~ 480 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCE
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccE
Confidence 8888888888888766554 77888888888888888888888888888888888888888762 3356778888888
Q ss_pred EeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 281 LNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 281 L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
|++++|++++..|..++.+++|+.|++++|++++.+|..+..+.
T Consensus 481 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred EECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 88888888888888888888888888888888887777665543
No 43
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.89 E-value=6.1e-23 Score=219.65 Aligned_cols=197 Identities=22% Similarity=0.224 Sum_probs=176.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcc-cCCCCCCcEEEcccCCCCCCC--CCccCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSE-IGNLRNLVYLNISKNILTGTV--PSTLGSLT 204 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~-l~~L~~L~~L~L~~N~l~g~~--p~~l~~l~ 204 (471)
++.+++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|.. +.++++|++|++++|.+++.. |..+.+++
T Consensus 297 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 376 (606)
T 3t6q_A 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLS 376 (606)
T ss_dssp CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCT
T ss_pred hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCC
Confidence 677889999999999999888889999999999999999999888765 889999999999999998766 77899999
Q ss_pred CcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccc-cCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEec
Q 042931 205 NLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPST-LGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNV 283 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 283 (471)
+|++|++++|.+++..|..+.++++|++|++++|.+++..|.. +.++++|+.|++++|.+++..|..+..+++|++|++
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 456 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNL 456 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEEC
Confidence 9999999999999888999999999999999999999877654 889999999999999999988999999999999999
Q ss_pred cCCcCcC---CCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 284 GSNSLIG---PIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 284 ~~N~l~g---~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
++|.+.+ ..+..+..+++|+.|++++|++++..|..+..+.
T Consensus 457 ~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 457 QGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 9999987 3346788999999999999999988887766554
No 44
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.89 E-value=1.5e-22 Score=208.70 Aligned_cols=192 Identities=23% Similarity=0.235 Sum_probs=173.4
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
.++++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 36899999999999998889999999999999999999987778899999999999999999977777899999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCcccccccc-ccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPS-TLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
|++|.++...+..+.++++|++|++++|+..+.+|. .|.++++|++|++++|.++ .+| .+..+++|++|++++|+++
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCC
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccC
Confidence 999999977777899999999999999666556655 7899999999999999998 456 4889999999999999999
Q ss_pred CCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 290 GPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 290 g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
+..|..+..+++|+.|++++|++++..|..+..+.
T Consensus 221 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred ccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 99999999999999999999999988777665443
No 45
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.89 E-value=1.4e-22 Score=219.85 Aligned_cols=214 Identities=23% Similarity=0.235 Sum_probs=146.2
Q ss_pred CCEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCC
Q 042931 103 GSIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRN 181 (471)
Q Consensus 103 ~~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~ 181 (471)
.+++.|++++.. ..+++ -.++++++|++|++++|.+.+..|..++++++|++|+|++|.+++..+..++++++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 98 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA------ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTN 98 (680)
T ss_dssp TTCSEEECCSSCCCCCCG------GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCCcEEECCCCCCCCcCH------HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCC
Confidence 356677776421 11211 12677788888888888888877878888888888888888887544446888888
Q ss_pred CcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccC--CCCCCCEEEC
Q 042931 182 LVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLG--RLTNLNYMSL 259 (471)
Q Consensus 182 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~--~l~~L~~L~L 259 (471)
|++|++++|.+++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..|..+. .+++|+.|++
T Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 88888888888776667788888888888888888877777778888888888888887776665443 4466777777
Q ss_pred CCCcCCCCCcccc---------------------------------------------------cCCC--CCCEEeccCC
Q 042931 260 SRNMFGGLLPQEI---------------------------------------------------GNLK--NLIELNVGSN 286 (471)
Q Consensus 260 ~~N~l~g~~p~~l---------------------------------------------------~~l~--~L~~L~L~~N 286 (471)
++|.+++..|..+ .+++ +|++|++++|
T Consensus 179 ~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n 258 (680)
T 1ziw_A 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258 (680)
T ss_dssp TTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTS
T ss_pred CCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCC
Confidence 7776666555433 3332 2666666666
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCcccccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTK 322 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 322 (471)
.+.+..|..++.+++|++|++++|++++..|..+..
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (680)
T 1ziw_A 259 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHG 294 (680)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTT
T ss_pred CcCccCcccccCcccccEeeCCCCccCccChhhhcC
Confidence 666555556666666666666666666655554443
No 46
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=225.94 Aligned_cols=191 Identities=25% Similarity=0.297 Sum_probs=121.1
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcc--cCCCCCCcEEEcccCCCCCCCC-CccCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSE--IGNLRNLVYLNISKNILTGTVP-STLGSLT 204 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~--l~~L~~L~~L~L~~N~l~g~~p-~~l~~l~ 204 (471)
++++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|++++
T Consensus 69 f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~ 148 (844)
T 3j0a_A 69 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLN 148 (844)
T ss_dssp TSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCS
T ss_pred hcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCC
Confidence 667777777777777777777777777777777777777777766654 7777777777777777776544 4677777
Q ss_pred CcCEEEccCCCCCCCCcccccCC---------------------------------------------------------
Q 042931 205 NLKNMGLSYNQLSGPLPQEIGNL--------------------------------------------------------- 227 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~~p~~l~~l--------------------------------------------------------- 227 (471)
+|++|++++|.+++..|..+..+
T Consensus 149 ~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l 228 (844)
T 3j0a_A 149 SLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAI 228 (844)
T ss_dssp SCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTS
T ss_pred CCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhc
Confidence 77777777777665544433221
Q ss_pred -------------------------------------CCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcc
Q 042931 228 -------------------------------------KNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQ 270 (471)
Q Consensus 228 -------------------------------------~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~ 270 (471)
++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|.
T Consensus 229 ~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 308 (844)
T 3j0a_A 229 SKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE 308 (844)
T ss_dssp CSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT
T ss_pred CcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH
Confidence 2233333334444333444455555666666666666655555
Q ss_pred cccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccc
Q 042931 271 EIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 271 ~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
.+..+++|++|++++|.+.+..|..+..+++|+.|++++|++++..|.
T Consensus 309 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 356 (844)
T 3j0a_A 309 AFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQ 356 (844)
T ss_dssp TTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSS
T ss_pred HhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChh
Confidence 566666666666666666655566666666666666666666544443
No 47
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.89 E-value=3.2e-22 Score=198.27 Aligned_cols=186 Identities=25% Similarity=0.332 Sum_probs=167.3
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
.++|+.|++++|.+.+..|..+.++++|++|++++|.+++..|..++++++|++|++++|.++ .+|..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 478999999999999888889999999999999999999888999999999999999999998 6777665 8999999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCccc--cccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcC
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLI--GPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSL 288 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~--g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 288 (471)
+++|.+++..+..+.++++|++|++++|.++ +..|..+..+ +|+.|++++|.+++ +|..+. ++|++|++++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999999776777999999999999999996 4778888888 99999999999986 676654 7999999999999
Q ss_pred cCCCchhhhcCCCCCcccCCCCcCccccccccccc
Q 042931 289 IGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 289 ~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l 323 (471)
.+..|..+..+++|+.|++++|++++..|..+..+
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 99888999999999999999999998777666544
No 48
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=2.3e-22 Score=215.19 Aligned_cols=189 Identities=23% Similarity=0.223 Sum_probs=131.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|+|++|.+.+..|..|+++++|++|+|++|.+++..+..++++++|++|+|++|.+++..|..++++++|+
T Consensus 95 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 174 (597)
T 3oja_B 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174 (597)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCc
Confidence 77889999999999999998888899999999999999999965555579999999999999999998888999999999
Q ss_pred EEEccCCCCCCCCcccccCC-------------------------------------CCCCEEeCCCCccccccccccCC
Q 042931 208 NMGLSYNQLSGPLPQEIGNL-------------------------------------KNLMELDLGTNSLIGPIPSTLGR 250 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l-------------------------------------~~L~~L~Ls~N~l~g~ip~~l~~ 250 (471)
+|++++|.+++..+..+.++ ++|+.|+|++|.+++ +..++.
T Consensus 175 ~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 175 NLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp EEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGG
T ss_pred EEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--Chhhcc
Confidence 99999999886432222111 123333344444333 234555
Q ss_pred CCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccc
Q 042931 251 LTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDT 320 (471)
Q Consensus 251 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~ 320 (471)
+++|+.|++++|.+++..|..++.+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ .+|..+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~ 320 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQ 320 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGH
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCccc
Confidence 5566666666666665555556666666666666665554 3444455555666666666555 344433
No 49
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.4e-22 Score=212.91 Aligned_cols=71 Identities=21% Similarity=0.263 Sum_probs=54.1
Q ss_pred CCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcC--CCchhhhcCCCCCcccCCCCcCccccccc
Q 042931 249 GRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIG--PIPSTLGLLTDLSYLDLSCNQFSSSIPND 319 (471)
Q Consensus 249 ~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~ip~~l~~l~~L~~L~l~~N~l~g~ip~~ 319 (471)
..+++|++|++++|.+++.+|..++++++|++|++++|++++ .+|..++.+++|++|++++|++++.+|..
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 566777788888888877777777778888888888888776 55667777888888888888887766654
No 50
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=9.7e-23 Score=215.72 Aligned_cols=202 Identities=25% Similarity=0.300 Sum_probs=168.9
Q ss_pred CCCCC-----cccce-eeCCCCCEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCE
Q 042931 88 SSDHC-----KWIGF-TCNSAGSIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQR 160 (471)
Q Consensus 88 ~~~~C-----~w~gv-~C~~~~~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~ 160 (471)
+.++| .|.|+ .|.. ++++.|++++.. ..++. .-+++|+.|+|++|.++ .+| ..+++|++
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~lp~---------~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSSLPD---------NLPPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSCCCS---------CCCTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred cCCccccccchhhhcccccc-CCccEEEeCCCCCCccCH---------hHcCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 45678 79999 7863 578888887521 12332 12478999999999998 688 56899999
Q ss_pred EeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCcc
Q 042931 161 LDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSL 240 (471)
Q Consensus 161 L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l 240 (471)
|+|++|++++ +|. +++ +|++|+|++|.+++ +|. .+++|++|++++|.+++ +|. .+++|++|+|++|.+
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 9999999997 888 765 99999999999997 776 68999999999999996 776 678999999999999
Q ss_pred ccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCC-------CEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCc
Q 042931 241 IGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNL-------IELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 241 ~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L-------~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~ 313 (471)
++ +|. +. ++|+.|++++|.++ .+|. +.. +| +.|+|++|+++ .+|..+..+++|+.|++++|+++
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred CC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 97 887 66 89999999999999 6777 654 77 99999999998 58888889999999999999999
Q ss_pred ccccccccccc
Q 042931 314 SSIPNDTTKLL 324 (471)
Q Consensus 314 g~ip~~~~~l~ 324 (471)
+.+|..+..+.
T Consensus 244 ~~~p~~l~~l~ 254 (571)
T 3cvr_A 244 SRIRESLSQQT 254 (571)
T ss_dssp HHHHHHHHHHH
T ss_pred CcCHHHHHHhh
Confidence 99998776654
No 51
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=215.65 Aligned_cols=189 Identities=26% Similarity=0.278 Sum_probs=169.4
Q ss_pred CCCCCCCEEEcCCCCCCccC--chhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCC-CccCCCCC
Q 042931 129 SCFPNLENLTFQSFPLAGSI--PPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVP-STLGSLTN 205 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~i--p~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p-~~l~~l~~ 205 (471)
..+++|+.|++++|.+.+.. |..+..+++|++|++++|.+++ +|..+.++++|++|++++|.+.+..| ..+.++++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 422 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-ccccccccCCCCEEEccCCccccccchhhhhcCCC
Confidence 57889999999999988654 7788899999999999999886 45558899999999999999987766 56889999
Q ss_pred cCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccc-cccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEecc
Q 042931 206 LKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLI-GPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVG 284 (471)
Q Consensus 206 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~-g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~ 284 (471)
|++|++++|.+++..|..+.++++|++|++++|.++ +.+|..+..+++|+.|++++|++++..|..+.++++|++|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 999999999999889999999999999999999997 6789999999999999999999998889999999999999999
Q ss_pred CCcCcCCCchhhhcCCCCCcccCCCCcCcccccc
Q 042931 285 SNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 285 ~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
+|++++.+|..+..+++|+.|++++|++++.+|.
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999998888899999999999999999998775
No 52
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.88 E-value=5.3e-23 Score=220.14 Aligned_cols=188 Identities=21% Similarity=0.210 Sum_probs=175.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCC-cccCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIP-SEIGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP-~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
++.+++|+.|++++|.+.+ +|..+..+++|++|++++|.+++..| ..+.++++|++|++++|.+++..|..+.++++|
T Consensus 372 ~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 450 (606)
T 3vq2_A 372 DLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 450 (606)
T ss_dssp HHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred hccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCC
Confidence 5678999999999999876 67889999999999999999998877 689999999999999999999999999999999
Q ss_pred CEEEccCCCCCC-CCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccC
Q 042931 207 KNMGLSYNQLSG-PLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGS 285 (471)
Q Consensus 207 ~~L~L~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~ 285 (471)
++|++++|.+++ .+|..++++++|++|++++|.+++..|..++++++|+.|++++|++++..|..+.++++|++|++++
T Consensus 451 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 530 (606)
T 3vq2_A 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSF 530 (606)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCC
Confidence 999999999998 4788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcCCCchhhhcCC-CCCcccCCCCcCccccc
Q 042931 286 NSLIGPIPSTLGLLT-DLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 286 N~l~g~ip~~l~~l~-~L~~L~l~~N~l~g~ip 317 (471)
|+++ .+|..+..++ +|+.|++++|++.+..+
T Consensus 531 N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 531 NRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp SCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9998 6777788887 59999999999987655
No 53
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.9e-22 Score=184.22 Aligned_cols=181 Identities=24% Similarity=0.240 Sum_probs=156.5
Q ss_pred CEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCC
Q 042931 135 ENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYN 214 (471)
Q Consensus 135 ~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 214 (471)
+.++.+++.+. .+|..+ .++|++|++++|++++..+..+.++++|++|++++|++++..+..+.++++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34566666665 456544 468999999999999766667899999999999999999776777899999999999999
Q ss_pred CCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCch
Q 042931 215 QLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPS 294 (471)
Q Consensus 215 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~ 294 (471)
.+++..+..+.++++|++|++++|.+++..+..+.++++|+.|++++|.+++..+..+..+++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 99977667789999999999999999987777789999999999999999987777789999999999999988754
Q ss_pred hhhcCCCCCcccCCCCcCccccccccccccc
Q 042931 295 TLGLLTDLSYLDLSCNQFSSSIPNDTTKLLY 325 (471)
Q Consensus 295 ~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 325 (471)
+++|+.|+++.|+++|.+|++++.+..
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 457899999999999999998887654
No 54
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.88 E-value=2.1e-22 Score=213.86 Aligned_cols=106 Identities=25% Similarity=0.244 Sum_probs=73.6
Q ss_pred CCEEEEEcCCCC-CCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCC
Q 042931 103 GSIIGLHLSRDY-GSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRN 181 (471)
Q Consensus 103 ~~v~~l~l~~~~-~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~ 181 (471)
..++.|+++... ..+++ -.++++++|++|++++|.+++..|..|+++++|++|+|++|.++ .+|.. .+++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~ 122 (562)
T 3a79_B 52 PRTKALSLSQNSISELRM------PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMAS 122 (562)
T ss_dssp TTCCEEECCSSCCCCCCG------GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTT
T ss_pred CCcCEEECCCCCccccCh------hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cccc
Confidence 466777776421 11211 13677788888888888887777777888888888888888877 56665 6777
Q ss_pred CcEEEcccCCCCC-CCCCccCCCCCcCEEEccCCCCC
Q 042931 182 LVYLNISKNILTG-TVPSTLGSLTNLKNMGLSYNQLS 217 (471)
Q Consensus 182 L~~L~L~~N~l~g-~~p~~l~~l~~L~~L~L~~N~l~ 217 (471)
|++|++++|++++ .+|..++++++|++|++++|.++
T Consensus 123 L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~ 159 (562)
T 3a79_B 123 LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159 (562)
T ss_dssp CSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCC
T ss_pred CCEEECCCCCccccCchHhhcccCcccEEecCCCccc
Confidence 7777777777775 34567777777777777777654
No 55
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.88 E-value=9.4e-22 Score=194.66 Aligned_cols=187 Identities=22% Similarity=0.326 Sum_probs=168.6
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
.++|+.|++++|.+++..+..|+++++|++|+|++|.+++..|..++++++|++|++++|.++ .+|..+. ++|++|+
T Consensus 51 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 51 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 468999999999999887778999999999999999999888999999999999999999998 6777665 7999999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCccc--cccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcC
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLI--GPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSL 288 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~--g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 288 (471)
+++|.+++..+..+.++++|++|++++|.+. +..|..+.++++|++|++++|.++. +|..+. ++|++|++++|.+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 9999999888888999999999999999995 4678889999999999999999984 666554 8999999999999
Q ss_pred cCCCchhhhcCCCCCcccCCCCcCccccccccccc
Q 042931 289 IGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 289 ~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l 323 (471)
.+..|..+..+++|+.|++++|++++..|..+..+
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 99989999999999999999999998776655544
No 56
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.88 E-value=1.8e-22 Score=209.87 Aligned_cols=190 Identities=23% Similarity=0.238 Sum_probs=91.6
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++++++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..+.++++|++|++++|.+++..|..|.++++|+
T Consensus 76 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 76 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 34445555555555554433333344455555555555555444444444455555555555544444444444444444
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccc------------------------------------------
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIP------------------------------------------ 245 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip------------------------------------------ 245 (471)
+|++++|.+++..+..+.++++|+.|++++|.+.+..+
T Consensus 156 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 44444444443333333333333333333333332222
Q ss_pred ------cccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 246 ------STLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 246 ------~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
..+.++++|+.|++++|.+++..+..+.++++|++|++++|++.+..|..+..+++|+.|++++|++++..+
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 313 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEE 313 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCH
Confidence 234445555555555555554444445555555555555555555555555555555555555555554333
No 57
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=7.1e-23 Score=201.18 Aligned_cols=180 Identities=19% Similarity=0.206 Sum_probs=151.1
Q ss_pred CCCCCEEEcCCCCCCccCchhc--cCCCCCCEEeccCCCCCCcCC----cccCCCCCCcEEEcccCCCCCCCCCccCCCC
Q 042931 131 FPNLENLTFQSFPLAGSIPPEI--SALSKLQRLDLSSNRLTGSIP----SEIGNLRNLVYLNISKNILTGTVPSTLGSLT 204 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l--~~L~~L~~L~Ls~N~l~g~iP----~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~ 204 (471)
+++|++|++++|.+.+.+|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+.+++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4569999999999999999888 899999999999999988666 3456789999999999999988888999999
Q ss_pred CcCEEEccCCCCCCC--Cc--ccccCCCCCCEEeCCCCcccccccc----ccCCCCCCCEEECCCCcCCCCCcccccCC-
Q 042931 205 NLKNMGLSYNQLSGP--LP--QEIGNLKNLMELDLGTNSLIGPIPS----TLGRLTNLNYMSLSRNMFGGLLPQEIGNL- 275 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~--~p--~~l~~l~~L~~L~Ls~N~l~g~ip~----~l~~l~~L~~L~L~~N~l~g~~p~~l~~l- 275 (471)
+|++|+|++|++.+. ++ ..++++++|++|++++|+++. +|. .++++++|++|++++|.+++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999988753 22 234688999999999999863 333 25788999999999999998888888776
Q ss_pred --CCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 276 --KNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 276 --~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
++|++|++++|+++ .+|..+. ++|+.|++++|++++
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR 286 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC
Confidence 69999999999998 6777664 789999999999987
No 58
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.88 E-value=2.7e-23 Score=207.87 Aligned_cols=210 Identities=22% Similarity=0.252 Sum_probs=158.1
Q ss_pred CCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCC
Q 042931 103 GSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNL 182 (471)
Q Consensus 103 ~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L 182 (471)
..++.|++++.. +. .+..-.++.+++|+.|++++|.+.+..|..++++++|++|++++|.+++..+..++++++|
T Consensus 52 ~~L~~L~l~~n~--i~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 126 (353)
T 2z80_A 52 EAVKSLDLSNNR--IT---YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSL 126 (353)
T ss_dssp TTCCEEECTTSC--CC---EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTC
T ss_pred ccCcEEECCCCc--Cc---ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccC
Confidence 367777776421 11 0111137788899999999998888778888889999999999999885434448888999
Q ss_pred cEEEcccCCCCCCCCC--ccCCCCCcCEEEccCCC-CCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEEC
Q 042931 183 VYLNISKNILTGTVPS--TLGSLTNLKNMGLSYNQ-LSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSL 259 (471)
Q Consensus 183 ~~L~L~~N~l~g~~p~--~l~~l~~L~~L~L~~N~-l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L 259 (471)
++|++++|.+++ +|. .+.++++|++|++++|. +.+..|..++++++|++|++++|.+++..|..+.++++|++|++
T Consensus 127 ~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 205 (353)
T 2z80_A 127 TFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205 (353)
T ss_dssp SEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecC
Confidence 999999998884 444 78889999999998884 66555677888889999999999888888888888888888888
Q ss_pred CCCcCCCCCcccccCCCCCCEEeccCCcCcCC-------------------------------CchhhhcCCCCCcccCC
Q 042931 260 SRNMFGGLLPQEIGNLKNLIELNVGSNSLIGP-------------------------------IPSTLGLLTDLSYLDLS 308 (471)
Q Consensus 260 ~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~-------------------------------ip~~l~~l~~L~~L~l~ 308 (471)
++|.++...+..+..+++|++|++++|.+++. +|..+..+++|+.|+++
T Consensus 206 ~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls 285 (353)
T 2z80_A 206 HMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFS 285 (353)
T ss_dssp ECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECC
T ss_pred CCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECC
Confidence 88887643333344577888888888877763 34456677888888888
Q ss_pred CCcCccccccc
Q 042931 309 CNQFSSSIPND 319 (471)
Q Consensus 309 ~N~l~g~ip~~ 319 (471)
+|+++ .+|..
T Consensus 286 ~N~l~-~i~~~ 295 (353)
T 2z80_A 286 RNQLK-SVPDG 295 (353)
T ss_dssp SSCCC-CCCTT
T ss_pred CCCCC-ccCHH
Confidence 88887 56654
No 59
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.88 E-value=1.2e-21 Score=198.35 Aligned_cols=188 Identities=24% Similarity=0.254 Sum_probs=139.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcc-cCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSE-IGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~-l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
++.+++|++|++++|.+.+..|..++++++|++|++++|.++. +|.. ++++++|++|++++|.+++..|..+.++++|
T Consensus 89 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (390)
T 3o6n_A 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167 (390)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTC
T ss_pred ccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCC
Confidence 7788999999999999998888889999999999999999985 5554 6899999999999999998888889999999
Q ss_pred CEEEccCCCCCCCCcccccCC-------------------------------------CCCCEEeCCCCccccccccccC
Q 042931 207 KNMGLSYNQLSGPLPQEIGNL-------------------------------------KNLMELDLGTNSLIGPIPSTLG 249 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p~~l~~l-------------------------------------~~L~~L~Ls~N~l~g~ip~~l~ 249 (471)
++|++++|.+++.-...+.++ ++|+.|++++|.+++. ..+.
T Consensus 168 ~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 168 QNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp CEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGG
T ss_pred CEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHc
Confidence 999999999875422222221 2344455555555432 3566
Q ss_pred CCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcccccccc
Q 042931 250 RLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDT 320 (471)
Q Consensus 250 ~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~ 320 (471)
++++|++|++++|.+++..|..+..+++|++|++++|++++ +|..+..+++|+.|++++|++++ +|..+
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~ 314 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQ 314 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGH
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccc
Confidence 67777777777777776667777777777777777777664 45555666777777777777763 44443
No 60
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.88 E-value=2.4e-22 Score=223.46 Aligned_cols=191 Identities=25% Similarity=0.309 Sum_probs=144.2
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcC-CcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSI-PSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNM 209 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~i-P~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 209 (471)
.++|+.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..++++++|++|+|++|.+.+..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 356778888888887777777888888888888887666666 5667788888888888888877777778888888888
Q ss_pred EccCCCCCCCCccc--ccCCCCCCEEeCCCCccccccc-cccCCCCCCCEEECCCCcCCCCCcccccCC--CCCCEEecc
Q 042931 210 GLSYNQLSGPLPQE--IGNLKNLMELDLGTNSLIGPIP-STLGRLTNLNYMSLSRNMFGGLLPQEIGNL--KNLIELNVG 284 (471)
Q Consensus 210 ~L~~N~l~g~~p~~--l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l--~~L~~L~L~ 284 (471)
+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..++++++|++|++++|.+++..|..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 88888877766654 7778888888888888776544 467778888888888888877777777766 777888888
Q ss_pred CCcCcCCCchhhhcCCC------CCcccCCCCcCccccccccc
Q 042931 285 SNSLIGPIPSTLGLLTD------LSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 285 ~N~l~g~ip~~l~~l~~------L~~L~l~~N~l~g~ip~~~~ 321 (471)
.|.+.+..|..++.+.+ |+.|++++|.+++.+|..+.
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 225 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS 225 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGG
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHH
Confidence 88877777776665554 77788888877776665544
No 61
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.9e-22 Score=190.49 Aligned_cols=183 Identities=21% Similarity=0.205 Sum_probs=159.0
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCC-CCCcCCcccCCCCCCcEEEccc-CCCCCCCCCccCCCCCcCEE
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNR-LTGSIPSEIGNLRNLVYLNISK-NILTGTVPSTLGSLTNLKNM 209 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~-l~g~iP~~l~~L~~L~~L~L~~-N~l~g~~p~~l~~l~~L~~L 209 (471)
++|+.|++++|.+++..+..+.++++|++|++++|. +++..+..+.++++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999998777789999999999999997 8765556889999999999998 99997667789999999999
Q ss_pred EccCCCCCCCCcccccCCCCCC---EEeCCCC-ccccccccccCCCCCCC-EEECCCCcCCCCCcccccCCCCCCEEecc
Q 042931 210 GLSYNQLSGPLPQEIGNLKNLM---ELDLGTN-SLIGPIPSTLGRLTNLN-YMSLSRNMFGGLLPQEIGNLKNLIELNVG 284 (471)
Q Consensus 210 ~L~~N~l~g~~p~~l~~l~~L~---~L~Ls~N-~l~g~ip~~l~~l~~L~-~L~L~~N~l~g~~p~~l~~l~~L~~L~L~ 284 (471)
++++|.+++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ .|++++|.++ .+|......++|++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999999986 776 88889998 9999999 88876666799999999 9999999998 566554445899999999
Q ss_pred CCc-CcCCCchhhhcC-CCCCcccCCCCcCcccccc
Q 042931 285 SNS-LIGPIPSTLGLL-TDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 285 ~N~-l~g~ip~~l~~l-~~L~~L~l~~N~l~g~ip~ 318 (471)
+|+ +++..+..+..+ ++|+.|++++|++++ +|.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~ 222 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPS 222 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc-CCh
Confidence 995 887777888999 999999999999985 443
No 62
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.88 E-value=7.5e-23 Score=213.68 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=168.9
Q ss_pred CCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCC
Q 042931 103 GSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNL 182 (471)
Q Consensus 103 ~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L 182 (471)
..+..|+++... +.. ..+++.+++|+.|+|++|.+++.. ..++|++|++++|.+++..+. .+++|
T Consensus 58 ~~L~~L~Ls~N~--l~~-----~~~l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L 122 (487)
T 3oja_A 58 TKLELLNLSSNV--LYE-----TLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGK 122 (487)
T ss_dssp TTCCEEECTTSC--CEE-----EEECTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCCCEEEC---CCSSC
T ss_pred CCCCEEEeeCCC--CCC-----CcccccCCCCCEEEecCCcCCCCC-----CCCCcCEEECcCCcCCCCCcc---ccCCC
Confidence 457777776422 111 112888999999999999987543 238999999999999976554 46899
Q ss_pred cEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCccccc-CCCCCCEEeCCCCccccccccccCCCCCCCEEECCC
Q 042931 183 VYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIG-NLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSR 261 (471)
Q Consensus 183 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~ 261 (471)
++|+|++|.+++..|..++++++|++|+|++|.+++.+|..+. ++++|++|+|++|.+++. |. +..+++|+.|++++
T Consensus 123 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~ 200 (487)
T 3oja_A 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSS 200 (487)
T ss_dssp EEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCS
T ss_pred CEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCC
Confidence 9999999999999999999999999999999999998888886 799999999999999976 33 44699999999999
Q ss_pred CcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCc-ccccccccc
Q 042931 262 NMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS-SSIPNDTTK 322 (471)
Q Consensus 262 N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~-g~ip~~~~~ 322 (471)
|.+++. |..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++. +.+|..+..
T Consensus 201 N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 201 NKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp SCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred CCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 999975 4558999999999999999996 7888999999999999999998 666665543
No 63
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.5e-22 Score=197.29 Aligned_cols=180 Identities=19% Similarity=0.189 Sum_probs=156.5
Q ss_pred CCCCCCCEEEcCCCCCCccCc----hhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCC--CC--Ccc
Q 042931 129 SCFPNLENLTFQSFPLAGSIP----PEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGT--VP--STL 200 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~ip----~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~--~p--~~l 200 (471)
+.+++|++|++++|.+.+..| ..+..+++|++|+|++|.+++..|..++++++|++|+|++|++.+. ++ ..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 789999999999999998766 4556899999999999999988888999999999999999998753 32 334
Q ss_pred CCCCCcCEEEccCCCCCCCCcc----cccCCCCCCEEeCCCCccccccccccCCC---CCCCEEECCCCcCCCCCccccc
Q 042931 201 GSLTNLKNMGLSYNQLSGPLPQ----EIGNLKNLMELDLGTNSLIGPIPSTLGRL---TNLNYMSLSRNMFGGLLPQEIG 273 (471)
Q Consensus 201 ~~l~~L~~L~L~~N~l~g~~p~----~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l---~~L~~L~L~~N~l~g~~p~~l~ 273 (471)
..+++|++|++++|+++ .+|. .++++++|++|+|++|.+++.+|..++.+ ++|++|++++|+++ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 78999999999999997 4444 35788999999999999999889888887 69999999999999 6788775
Q ss_pred CCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 274 NLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 274 ~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
++|++|++++|++++. |. +..+++|+.|++++|+++.
T Consensus 272 --~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 --AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp --SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred --CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7999999999999974 33 5788999999999999974
No 64
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.87 E-value=1.4e-21 Score=211.95 Aligned_cols=167 Identities=26% Similarity=0.264 Sum_probs=152.5
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
+++++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..|+++++|++|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 68999999999999888888999999999999999999988999999999999999999999665567999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCccccc--CCCCCCEEeccCCcCc
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIG--NLKNLIELNVGSNSLI 289 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~--~l~~L~~L~L~~N~l~ 289 (471)
++|.+++..|..++++++|++|++++|.+++..|..++++++|++|++++|.+++..|..+. .+++|++|++++|.+.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999987778999999999999999999999999999999999999999999988877654 5688999999999988
Q ss_pred CCCchhhhc
Q 042931 290 GPIPSTLGL 298 (471)
Q Consensus 290 g~ip~~l~~ 298 (471)
+..|..+..
T Consensus 185 ~~~~~~~~~ 193 (680)
T 1ziw_A 185 EFSPGCFHA 193 (680)
T ss_dssp CBCTTGGGG
T ss_pred ccChhhhhh
Confidence 877765554
No 65
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.87 E-value=5.1e-22 Score=208.65 Aligned_cols=182 Identities=23% Similarity=0.320 Sum_probs=126.9
Q ss_pred CCCCEEEcCCCCCCccCchhc-----cCCCCCCEEeccCCCCCCcCCc-c-------------------------cCCCC
Q 042931 132 PNLENLTFQSFPLAGSIPPEI-----SALSKLQRLDLSSNRLTGSIPS-E-------------------------IGNLR 180 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l-----~~L~~L~~L~Ls~N~l~g~iP~-~-------------------------l~~L~ 180 (471)
++|+.|++++|.+.|.+|..+ +++++|+.+++++|.+ .+|. . ...++
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 367777777777777777766 5565555555555554 2331 0 15677
Q ss_pred CCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCC--CCcccccCCCCCCEEeCCCCccccccccc-cCCCCCCCEE
Q 042931 181 NLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSG--PLPQEIGNLKNLMELDLGTNSLIGPIPST-LGRLTNLNYM 257 (471)
Q Consensus 181 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L 257 (471)
+|++|++++|.+++.+|..++++++|++|++++|.+++ .+|..++++++|++|++++|.+++.+|.. +..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 77777777777777777777777777777777777775 45666777777777777777777756654 6677777777
Q ss_pred ECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccc
Q 042931 258 SLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPND 319 (471)
Q Consensus 258 ~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~ 319 (471)
++++|.+++.+|..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|+++ .+|..
T Consensus 405 ~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 462 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG 462 (520)
T ss_dssp ECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTT
T ss_pred ECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHH
Confidence 7777777776666554 57777777777776 66776667777777777777777 35554
No 66
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.87 E-value=3.1e-21 Score=181.27 Aligned_cols=159 Identities=25% Similarity=0.281 Sum_probs=83.2
Q ss_pred CCCCCCcccceeeCCCCCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCC
Q 042931 87 YSSDHCKWIGFTCNSAGSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSN 166 (471)
Q Consensus 87 ~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N 166 (471)
.+.+.|+|.+|.|+..+ + ..++ .+-.++|+.|+|++|.+.+..|..+..+++|++|+|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~-l---------~~ip---------~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKR-H---------ASVP---------AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp CTTCEEETTEEECTTSC-C---------SSCC---------SCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCEEeCCEeEccCCC-c---------CccC---------CCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 46788999999997432 1 1111 111245555555555555555555555555555555555
Q ss_pred CCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCcccccccc
Q 042931 167 RLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPS 246 (471)
Q Consensus 167 ~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 246 (471)
++++..+..+.++++|++|+|++|++++..+..+..+++|++|+|++|.++ .+|..+.++++|++|+|++|++++..+.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 554333333455555555555555555444444455555555555555554 4454455555555555555555443333
Q ss_pred ccCCCCCCCEEECCCCcCC
Q 042931 247 TLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 247 ~l~~l~~L~~L~L~~N~l~ 265 (471)
.+..+++|+.|++++|.+.
T Consensus 154 ~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTCTTCCEEECTTSCBC
T ss_pred HHhCCCCCCEEEeeCCCcc
Confidence 4444444444444444444
No 67
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.5e-21 Score=184.27 Aligned_cols=178 Identities=21% Similarity=0.212 Sum_probs=154.7
Q ss_pred ccCCCCCCCEEEcCCCC-CCccCchhccCCCCCCEEeccC-CCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCC
Q 042931 127 NFSCFPNLENLTFQSFP-LAGSIPPEISALSKLQRLDLSS-NRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLT 204 (471)
Q Consensus 127 ~l~~l~~L~~L~L~~n~-l~g~ip~~l~~L~~L~~L~Ls~-N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~ 204 (471)
.++.+++|+.|++++|. +.+..+..|.++++|++|++++ |.+++..|..+.++++|++|++++|.+++ +|. +..++
T Consensus 50 ~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~ 127 (239)
T 2xwt_C 50 AFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVY 127 (239)
T ss_dssp TTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCC
T ss_pred HccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccc
Confidence 37889999999999997 7766666899999999999999 99997666789999999999999999986 776 88999
Q ss_pred CcC---EEEccCC-CCCCCCcccccCCCCCC-EEeCCCCccccccccccCCCCCCCEEECCCCc-CCCCCcccccCC-CC
Q 042931 205 NLK---NMGLSYN-QLSGPLPQEIGNLKNLM-ELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNM-FGGLLPQEIGNL-KN 277 (471)
Q Consensus 205 ~L~---~L~L~~N-~l~g~~p~~l~~l~~L~-~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~-l~g~~p~~l~~l-~~ 277 (471)
+|+ +|++++| .+++..+..+.++++|+ +|++++|.++ .+|......++|+.|++++|. +++..+..+..+ ++
T Consensus 128 ~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~ 206 (239)
T 2xwt_C 128 STDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSG 206 (239)
T ss_dssp BCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBC
T ss_pred ccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccC
Confidence 998 9999999 99876667799999999 9999999998 677665555899999999995 987667788999 99
Q ss_pred CCEEeccCCcCcCCCchhhhcCCCCCcccCCCC
Q 042931 278 LIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCN 310 (471)
Q Consensus 278 L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N 310 (471)
|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 207 L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 207 PSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 9999999999985 4443 5778899988876
No 68
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.86 E-value=1.1e-21 Score=208.40 Aligned_cols=161 Identities=25% Similarity=0.381 Sum_probs=87.3
Q ss_pred cCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCC--CCCCccCCCCCcCEEEccCCCCCCCCcc-cccCCCC
Q 042931 153 SALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTG--TVPSTLGSLTNLKNMGLSYNQLSGPLPQ-EIGNLKN 229 (471)
Q Consensus 153 ~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g--~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~l~~l~~ 229 (471)
..+++|++|++++|.+++.+|..++++++|++|++++|++++ .+|..+.++++|++|++++|.+++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 445555555555555555555555555555555555555553 2234455555555555555555553443 2455555
Q ss_pred CCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchh-hhcCCCCCcccCC
Q 042931 230 LMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPST-LGLLTDLSYLDLS 308 (471)
Q Consensus 230 L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~-l~~l~~L~~L~l~ 308 (471)
|++|++++|.+++.+|..+. ++|+.|++++|+++ .+|..+..+++|++|++++|+++ .+|.. +..+++|+.|+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 55555555555555554433 45555555555555 45555555555555555555555 23333 5555555555555
Q ss_pred CCcCccccc
Q 042931 309 CNQFSSSIP 317 (471)
Q Consensus 309 ~N~l~g~ip 317 (471)
+|++.+..|
T Consensus 506 ~N~~~c~c~ 514 (562)
T 3a79_B 506 DNPWDCTCP 514 (562)
T ss_dssp SCCBCCCHH
T ss_pred CCCcCCCcc
Confidence 555555443
No 69
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=4.3e-21 Score=188.47 Aligned_cols=173 Identities=25% Similarity=0.426 Sum_probs=152.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.+.+. |+ +..+++|++|++++|.+++ +| .+.++++|++|++++|.+++ +|. +..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCC
Confidence 67789999999999999864 44 9999999999999999986 44 69999999999999999986 443 99999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++. |. +.++++|++|++++|.+++. +. +..+++|+.|++++|.+++..+ +..+++|++|++++|+
T Consensus 133 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 999999999854 43 88999999999999999864 44 8999999999999999986543 8899999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
+.+..| +..+++|+.|++++|++++
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcccc--ccCCCCCCEEEccCCeeec
Confidence 987653 8899999999999999976
No 70
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.86 E-value=3.4e-22 Score=196.97 Aligned_cols=179 Identities=21% Similarity=0.191 Sum_probs=117.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|++++|.+.+..| +..+++|++|++++|.+++ +| ..++|++|++++|.+++..+. .+++|+
T Consensus 54 ~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~ 123 (317)
T 3o53_A 54 LAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAANNNISRVSCS---RGQGKK 123 (317)
T ss_dssp HTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECCSSCCSEEEEC---CCSSCE
T ss_pred hhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEECCCCccCCcCcc---ccCCCC
Confidence 6677777888887777776554 7777777777777777764 22 225566666666665543332 246677
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCcccccccccc-CCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTL-GRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l-~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
+|++++|.+++..|..++.+++|++|++++|.+++..|..+ ..+++|++|++++|.+++. |. ...+++|++|++++|
T Consensus 124 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSN 201 (317)
T ss_dssp EEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSS
T ss_pred EEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCC
Confidence 77777777776656667777777777777777776666555 3567777777777777644 32 234677777777777
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCcccccccc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDT 320 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~ 320 (471)
++++. |..+..+++|+.|++++|++++ +|..+
T Consensus 202 ~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~~~~ 233 (317)
T 3o53_A 202 KLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (317)
T ss_dssp CCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred cCCcc-hhhhcccCcccEEECcCCcccc-hhhHh
Confidence 77654 3346677777777777777763 55544
No 71
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=207.42 Aligned_cols=192 Identities=24% Similarity=0.279 Sum_probs=157.0
Q ss_pred CCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcC--CcccCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 129 SCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSI--PSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~i--P~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
..+++|+.|++++|.+.+.++. ..+++|++|++++|.+++.. |..+.++++|++|++++|.+++. |..+..+++|
T Consensus 322 ~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L 398 (570)
T 2z63_A 322 LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQL 398 (570)
T ss_dssp CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTC
T ss_pred ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCC
Confidence 4566677777777776666554 67888888888888887543 67788888999999999888754 4448889999
Q ss_pred CEEEccCCCCCCCCc-ccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCC-CCCcccccCCCCCCEEecc
Q 042931 207 KNMGLSYNQLSGPLP-QEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFG-GLLPQEIGNLKNLIELNVG 284 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~-g~~p~~l~~l~~L~~L~L~ 284 (471)
++|++++|.+++..| ..+.++++|++|++++|.+++.+|..+.++++|+.|++++|.++ +.+|..+..+++|++|+++
T Consensus 399 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~ 478 (570)
T 2z63_A 399 EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478 (570)
T ss_dssp CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECC
Confidence 999999998887666 46788899999999999998888888889999999999999887 5788888889999999999
Q ss_pred CCcCcCCCchhhhcCCCCCcccCCCCcCccccccccccc
Q 042931 285 SNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 285 ~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l 323 (471)
+|++++..|..+..+++|+.|++++|++++..|..+..+
T Consensus 479 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 517 (570)
T 2z63_A 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRL 517 (570)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcc
Confidence 999988888888899999999999999988766655443
No 72
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.85 E-value=9e-22 Score=207.95 Aligned_cols=223 Identities=21% Similarity=0.270 Sum_probs=181.3
Q ss_pred CCcccceeeCCC------------CCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCC
Q 042931 91 HCKWIGFTCNSA------------GSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKL 158 (471)
Q Consensus 91 ~C~w~gv~C~~~------------~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L 158 (471)
.|.|.|+ |+.. .+++.|++++.. +. .+..-.++++++|++|++++|.+.+..|..|+++++|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~--l~---~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNK--IT---YIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSC--CC---EECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCc--cC---ccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 4899998 8632 245666665421 10 0111238899999999999999999888999999999
Q ss_pred CEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCC-CCCCccCCCCCcCEEEccCCCCCCCCc-ccccCCCCCCEEeCC
Q 042931 159 QRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTG-TVPSTLGSLTNLKNMGLSYNQLSGPLP-QEIGNLKNLMELDLG 236 (471)
Q Consensus 159 ~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g-~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~Ls 236 (471)
++|+|++|.+++..|..++++++|++|++++|.+++ .+|..++++++|++|++++|.+.+.+| ..+.++++|++|+++
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 999999999998777779999999999999999986 467889999999999999999666666 579999999999999
Q ss_pred CCccccccccccCCCCCCCEEECCCCcCCCCCcccc-cCCCCCCEEeccCCcCcCCC--c-hhhhcCCCCCcccCCCCcC
Q 042931 237 TNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEI-GNLKNLIELNVGSNSLIGPI--P-STLGLLTDLSYLDLSCNQF 312 (471)
Q Consensus 237 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l-~~l~~L~~L~L~~N~l~g~i--p-~~l~~l~~L~~L~l~~N~l 312 (471)
+|.+++.+|..++++++|+.|+++.|.+. .+|..+ ..+++|++|++++|++++.. | .....+++|+.|++++|.+
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 235 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVL 235 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEE
T ss_pred CCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccccc
Confidence 99999999999999999999999999886 445443 56899999999999998742 1 2234567788888888888
Q ss_pred cccccccc
Q 042931 313 SSSIPNDT 320 (471)
Q Consensus 313 ~g~ip~~~ 320 (471)
++..+..+
T Consensus 236 ~~~~~~~l 243 (549)
T 2z81_A 236 TDESFNEL 243 (549)
T ss_dssp EHHHHHHH
T ss_pred chhHHHHH
Confidence 77655444
No 73
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.85 E-value=4.6e-20 Score=191.03 Aligned_cols=167 Identities=27% Similarity=0.341 Sum_probs=86.7
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|++|++++|.+++. | ++++++|++|++++|++++ +| ++++++|++|++++|++++. | ++++++|+
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~ 151 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLT 151 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCC
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCC
Confidence 55556666666666665552 2 5566666666666666654 33 55566666666666665542 2 45555555
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|...+.+ .++.+++|++|++++|++++ +| ++.+++|+.|++++|.+++. .++.+++|++|++++|+
T Consensus 152 ~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~ 223 (457)
T 3bz5_A 152 ELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNK 223 (457)
T ss_dssp EEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSC
T ss_pred EEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCc
Confidence 5555555444443 24445555555555555544 33 44445555555555554442 24444555555555555
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
+++ +| ++.+++|+.|++++|++++
T Consensus 224 l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 224 LTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred ccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 544 33 4444455555555555444
No 74
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=174.94 Aligned_cols=155 Identities=21% Similarity=0.228 Sum_probs=102.8
Q ss_pred CEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCC-cccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccC
Q 042931 135 ENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIP-SEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSY 213 (471)
Q Consensus 135 ~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP-~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~ 213 (471)
+.+++++|.++ .+|..+. +.+++|+|++|++++..| ..+.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777765 3565543 345677777777776544 3356777777777777777765555677777777777777
Q ss_pred CCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCC
Q 042931 214 NQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPI 292 (471)
Q Consensus 214 N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~i 292 (471)
|.+++..|..+.++++|++|+|++|.+++..|..|.++++|+.|++++|++++..|..|..+++|+.|++++|.+.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 7776666666667777777777777776666666666666777777666666666666666666666666666665443
No 75
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=3.2e-20 Score=182.20 Aligned_cols=176 Identities=27% Similarity=0.410 Sum_probs=154.1
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
.+.+++|+.|++++|.+.. +| .+..+++|++|++++|.+++ +|. +.++++|++|++++|.+++ +| .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4457789999999999875 55 68999999999999999986 454 9999999999999999986 34 799999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++ +|. +..+++|++|++++|.+++..+ ++.+++|+.|++++|.+++. +. +..+++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 99999999985 454 8999999999999999987544 88999999999999999864 44 8999999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
+++..+ +..+++|+.|++++|++++..|
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~ 212 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP 212 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc
Confidence 986544 8899999999999999987653
No 76
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=3.1e-20 Score=173.32 Aligned_cols=135 Identities=17% Similarity=0.198 Sum_probs=74.6
Q ss_pred CCCEEEcCCCCCCccCch-hccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 133 NLENLTFQSFPLAGSIPP-EISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 133 ~L~~L~L~~n~l~g~ip~-~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
.++.|+|++|.+++..|. .|..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 345555555555554332 2455555555555555555444445555555555555555555554545555555555555
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGL 267 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ 267 (471)
++|.+++..|..+.++++|++|+|++|++++..|..|..+++|+.|++++|.+++.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 55555555555555555555555555555555555555555555555555555443
No 77
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.84 E-value=1.1e-19 Score=188.25 Aligned_cols=175 Identities=24% Similarity=0.274 Sum_probs=122.8
Q ss_pred cccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCC
Q 042931 126 LNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTN 205 (471)
Q Consensus 126 l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~ 205 (471)
++++.+++|++|++++|.+++ +| ++.+++|++|++++|++++ +| ++++++|++|++++|...+.+ .+..+++
T Consensus 100 ~~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 100 LDVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp CCCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred eecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 347788888888888888877 44 7888888888888888886 43 777788888888888666665 3677777
Q ss_pred cCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccC
Q 042931 206 LKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGS 285 (471)
Q Consensus 206 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~ 285 (471)
|++|++++|.+++ +| ++.+++|+.|++++|.+++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 7777777777775 44 66777777777777777653 36677777777777777776 45 66677777777777
Q ss_pred CcCcCCCchhhhcCC-------CCCcccCCCCcCccccc
Q 042931 286 NSLIGPIPSTLGLLT-------DLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 286 N~l~g~ip~~l~~l~-------~L~~L~l~~N~l~g~ip 317 (471)
|++++..+..+..+. +|+.|++++|++.|.+|
T Consensus 243 N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 777765554444443 34455555555555544
No 78
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.84 E-value=8.5e-21 Score=203.12 Aligned_cols=182 Identities=23% Similarity=0.250 Sum_probs=153.3
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
+++++|+|++|.|++..|..|.++++|++|||++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999877788999999999999999999766778999999999999999999776778999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCcccc-ccccccCCCCCCCEEECCCCcCCCCCcccccCCCCC----CEEeccCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIG-PIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNL----IELNVGSN 286 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L----~~L~L~~N 286 (471)
++|++++..+..|+++++|++|++++|.+++ .+|..++.+++|++|++++|++++..|..+..+.++ ..++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999997777789999999999999999976 578889999999999999999998888887665544 46888999
Q ss_pred cCcCCCchhhhcCCCCCcccCCCCcCcc
Q 042931 287 SLIGPIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
.+....|..+. ...+..+++.+|..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSH
T ss_pred cccccCccccc-chhhhhhhhhcccccc
Confidence 88765554443 3345566666665543
No 79
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=2.7e-20 Score=186.86 Aligned_cols=156 Identities=26% Similarity=0.205 Sum_probs=75.5
Q ss_pred CCEEeccCCCCCCcCCcccC-CCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCC
Q 042931 158 LQRLDLSSNRLTGSIPSEIG-NLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLG 236 (471)
Q Consensus 158 L~~L~Ls~N~l~g~iP~~l~-~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 236 (471)
++.|+|++|++++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44455555555443333343 45555555555555544444445555555555555555544334444555555555555
Q ss_pred CCccccccccccCCCCCCCEEECCCCcCCCCCcccc---cCCCCCCEEeccCCcCcCCCchhhhcCCC--CCcccCCCCc
Q 042931 237 TNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEI---GNLKNLIELNVGSNSLIGPIPSTLGLLTD--LSYLDLSCNQ 311 (471)
Q Consensus 237 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~l~~L~~L~L~~N~l~g~ip~~l~~l~~--L~~L~l~~N~ 311 (471)
+|.+++..|..|.++++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..+..++. ++.|++++|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 555554444455555555555555555543222222 34555555555555555444444444444 2555555555
Q ss_pred Cc
Q 042931 312 FS 313 (471)
Q Consensus 312 l~ 313 (471)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 80
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=5.7e-20 Score=171.54 Aligned_cols=152 Identities=19% Similarity=0.277 Sum_probs=108.2
Q ss_pred CEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCC
Q 042931 135 ENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYN 214 (471)
Q Consensus 135 ~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 214 (471)
+.++++++.+. .+|..+. ++|+.|+|++|++++..|..+.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46677777765 4565543 57788888888877655567777777888888888777766777777777777777777
Q ss_pred CCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 215 QLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 215 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
.++...+..+.++++|++|+|++|.+++..|..|.++++|+.|++++|.+++..+..+..+++|++|++++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 777444445667777777777777777766777777777777777777777666656666677777777776654
No 81
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=8.4e-20 Score=170.38 Aligned_cols=135 Identities=25% Similarity=0.285 Sum_probs=118.4
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|+.|++++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 67899999999998777778889999999999999999877888999999999999999998665566788999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGG 266 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g 266 (471)
++|.+++..|..+.++++|++|+|++|.+++..+..+..+++|+.|++++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9999998888889999999999999999988777788889999999999998764
No 82
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=4.9e-20 Score=179.41 Aligned_cols=174 Identities=25% Similarity=0.403 Sum_probs=144.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|++++|.+... | .+..+++|++|++++|++++. ++ +.++++|++|++++|.+++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 44567889999999888653 3 488899999999999999864 44 8899999999999999885 33 488999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++ + +.+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..| +..+++|++|++++|.
T Consensus 116 ~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 99999999885 3 4688899999999999998864 578889999999999999987544 8889999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
+++ +| .+..+++|+.|++++|+++..
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 876 44 388899999999999988763
No 83
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.83 E-value=7.3e-20 Score=189.89 Aligned_cols=176 Identities=31% Similarity=0.481 Sum_probs=131.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.+.+..| ++.+++|+.|++++|.+++ + +.+..+++|++|++++|.+++..| +..+++|+
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 268 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLT 268 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCC
Confidence 5567888888888888877655 6778888888888888875 3 357778888888888888876544 77788888
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..| +..+++|+.|++++|.+++..| ++.+++|+.|++++|++++..| +..+++|++|++++|.
T Consensus 269 ~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 269 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSC
T ss_pred EEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCc
Confidence 88888888775433 7777888888888888776444 6677788888888887776654 5677777777777777
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
+++. ..+..+++|+.|++++|++++.+|
T Consensus 343 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 343 VSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 7764 356777777777777777777665
No 84
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=1.3e-19 Score=170.16 Aligned_cols=151 Identities=27% Similarity=0.291 Sum_probs=74.4
Q ss_pred CEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCC
Q 042931 135 ENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYN 214 (471)
Q Consensus 135 ~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 214 (471)
+.++.+++.+. .+|..+. ++|++|+|++|.+++..|..+.++++|++|+|++|++.+..+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555443 4444332 45555555555555555555555555555555555554333344455555555555555
Q ss_pred CCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 215 QLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 215 ~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
.+++..+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555443444445555555555555544 34444444444444444444444333333444444444444444433
No 85
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.83 E-value=1.1e-19 Score=188.58 Aligned_cols=174 Identities=33% Similarity=0.456 Sum_probs=147.6
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++++++|+.|++++|.+.+. +.+..+++|++|++++|.+++..| ++.+++|++|++++|.+++. +.+..+++|+
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 246 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLT 246 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCC
Confidence 77889999999999988753 348889999999999999987655 77889999999999998853 4688899999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..| +..+++|++|++++|.+++..| +..+++|+.|++++|.+++..| +..+++|+.|++++|+
T Consensus 247 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSC
T ss_pred EEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCc
Confidence 99999999986544 8889999999999999887544 8889999999999999987544 7889999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
+++..| +..+++|+.|++++|++++.
T Consensus 321 l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 321 ISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCchh--hccCccCCEeECCCCccCCc
Confidence 988766 77899999999999998875
No 86
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.83 E-value=7.5e-20 Score=181.96 Aligned_cols=178 Identities=26% Similarity=0.399 Sum_probs=157.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++ ++. +..+++|++|++++|.+++..+ +..+++|+
T Consensus 151 ~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~ 224 (347)
T 4fmz_A 151 LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLN 224 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCC
Confidence 6778999999999999876544 8899999999999999985 444 8899999999999999986654 88999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++. |. +..+++|++|++++|.+++. +.+..+++|++|++++|.+++. ..+..+++|++|++++|.
T Consensus 225 ~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 225 SLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp EEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred EEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc
Confidence 999999999854 44 89999999999999999863 4688999999999999999864 458889999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
+.+..|..++.+++|+.|++++|++++..|
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCcChhHhhccccCCEEEccCCccccccC
Confidence 999999999999999999999999998766
No 87
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.82 E-value=1.5e-19 Score=179.75 Aligned_cols=184 Identities=26% Similarity=0.408 Sum_probs=159.5
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +.++++|++|++++|.+.+..+ +..+++|+
T Consensus 128 ~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 202 (347)
T 4fmz_A 128 LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLH 202 (347)
T ss_dssp GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCC
T ss_pred hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccc
Confidence 67889999999999977666654 8999999999999999986433 8899999999999999985433 88999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|++|++++|.
T Consensus 203 ~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~ 276 (347)
T 4fmz_A 203 YFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQ 276 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCc
Confidence 99999999986544 8899999999999999986544 89999999999999999864 468899999999999999
Q ss_pred CcCCCchhhhcCCCCCcccCCCCcCcccccccccccc
Q 042931 288 LIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 288 l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
+++. +.+..+++|+.|++++|++++..|..+..+.
T Consensus 277 l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 311 (347)
T 4fmz_A 277 ISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLT 311 (347)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCT
T ss_pred cCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccc
Confidence 9874 4588999999999999999988877665543
No 88
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=8.5e-22 Score=195.08 Aligned_cols=182 Identities=22% Similarity=0.255 Sum_probs=98.8
Q ss_pred CCCCCCCEEEcCCCCCCcc-CchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccC-CCCC-CCCCccCCCCC
Q 042931 129 SCFPNLENLTFQSFPLAGS-IPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKN-ILTG-TVPSTLGSLTN 205 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~-ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N-~l~g-~~p~~l~~l~~ 205 (471)
..+++|+.|++++|.+.+. +|..+..+++|++|++++|.+++..|..++++++|++|++++| .+++ .+|..+.++++
T Consensus 90 ~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~ 169 (336)
T 2ast_B 90 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 169 (336)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCC
Confidence 3455566666666555544 5555555666666666666555555555555666666666665 4443 24444555566
Q ss_pred cCEEEccCC-CCCCC-CcccccCCC-CCCEEeCCCC--ccc-cccccccCCCCCCCEEECCCCc-CCCCCcccccCCCCC
Q 042931 206 LKNMGLSYN-QLSGP-LPQEIGNLK-NLMELDLGTN--SLI-GPIPSTLGRLTNLNYMSLSRNM-FGGLLPQEIGNLKNL 278 (471)
Q Consensus 206 L~~L~L~~N-~l~g~-~p~~l~~l~-~L~~L~Ls~N--~l~-g~ip~~l~~l~~L~~L~L~~N~-l~g~~p~~l~~l~~L 278 (471)
|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+.++++|+.|++++|. +++..+..+.++++|
T Consensus 170 L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L 249 (336)
T 2ast_B 170 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 249 (336)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred CCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCC
Confidence 666666666 55532 444455555 6666666665 333 3445555555666666666665 444455555555666
Q ss_pred CEEeccCCc-CcCCCchhhhcCCCCCcccCCCC
Q 042931 279 IELNVGSNS-LIGPIPSTLGLLTDLSYLDLSCN 310 (471)
Q Consensus 279 ~~L~L~~N~-l~g~ip~~l~~l~~L~~L~l~~N 310 (471)
++|++++|. +.......+..+++|+.|++++|
T Consensus 250 ~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 250 QHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 666665553 11111113455555666666555
No 89
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=2.2e-21 Score=211.84 Aligned_cols=221 Identities=19% Similarity=0.168 Sum_probs=80.9
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCC
Q 042931 66 QLEAKALLNTGWWDSSFWTANYSSDHCKWIGFTCNSAGSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLA 145 (471)
Q Consensus 66 ~~~~~~l~~~~~~~~~~w~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~ 145 (471)
.+...++-..+|.....|.. .....+.|.+++++. ++++.+++....-...+...+..++++.+ ++..+++..|.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~-~i~~~~~~~n~~~ 214 (727)
T 4b8c_D 138 MEMADTLTDSKTAKKQQPTG-DSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQY-SIDEDDDIENRMV 214 (727)
T ss_dssp HHHHHHHHHHHTTC------------------------------------------------------------------
T ss_pred hhhhhhcccccCcccCCCcC-CCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcc-cccCcccccccee
Confidence 33333333334444455632 344567899998865 66777777431110011111111111110 0112222222222
Q ss_pred ccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCccccc
Q 042931 146 GSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIG 225 (471)
Q Consensus 146 g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~ 225 (471)
..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..|++|++|++|+|++|.++ .+|..++
T Consensus 215 -~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 290 (727)
T 4b8c_D 215 -MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG 290 (727)
T ss_dssp --------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG
T ss_pred -cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhc
Confidence 23444555555666666666555 45555555566666666666555 55555555666666666666555 5555555
Q ss_pred CCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCC-CCEEeccCCcCcCCCch
Q 042931 226 NLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKN-LIELNVGSNSLIGPIPS 294 (471)
Q Consensus 226 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~-L~~L~L~~N~l~g~ip~ 294 (471)
++++|++|+|++|.++ .+|..|+++++|+.|+|++|.+++.+|..+..+.. +..+++++|.++|.+|.
T Consensus 291 ~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 291 SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp GGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 5566666666655554 45555555666666666666665555554433211 11234445555544443
No 90
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.82 E-value=1.2e-19 Score=194.26 Aligned_cols=170 Identities=24% Similarity=0.285 Sum_probs=149.3
Q ss_pred cCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccC
Q 042931 147 SIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGN 226 (471)
Q Consensus 147 ~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~ 226 (471)
.||+.+. +++++|||++|+|++..|..|.++++|++|+|++|++++..|..|.+|++|++|+|++|++++..|..|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 4565442 47999999999999777788999999999999999999777788999999999999999999777778999
Q ss_pred CCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCC-CCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCC--
Q 042931 227 LKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGG-LLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLS-- 303 (471)
Q Consensus 227 l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~-- 303 (471)
+++|++|+|++|++++..+..|+++++|++|++++|.+++ .+|..++.+++|++|++++|++.+..|..+..+.+++
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~ 202 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 202 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhh
Confidence 9999999999999998777789999999999999999976 4688899999999999999999999998888776654
Q ss_pred --cccCCCCcCcccccc
Q 042931 304 --YLDLSCNQFSSSIPN 318 (471)
Q Consensus 304 --~L~l~~N~l~g~ip~ 318 (471)
.++++.|.+....|.
T Consensus 203 ~~~~~ls~n~l~~i~~~ 219 (635)
T 4g8a_A 203 NLSLDLSLNPMNFIQPG 219 (635)
T ss_dssp CCEEECTTCCCCEECTT
T ss_pred hhhhhcccCcccccCcc
Confidence 577889988764443
No 91
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.1e-20 Score=183.32 Aligned_cols=159 Identities=21% Similarity=0.163 Sum_probs=140.6
Q ss_pred CCCCEEEcCCCCCCccCchhcc-CCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 132 PNLENLTFQSFPLAGSIPPEIS-ALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~-~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
+.++.|+|++|.+++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 5689999999999988777787 999999999999999987778899999999999999999977777899999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCcccccccccc---CCCCCCCEEECCCCcCCCCCcccccCCCC--CCEEeccC
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTL---GRLTNLNYMSLSRNMFGGLLPQEIGNLKN--LIELNVGS 285 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l---~~l~~L~~L~L~~N~l~g~~p~~l~~l~~--L~~L~L~~ 285 (471)
|++|.+++..|..+.++++|++|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..+..++. ++.|++++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 99999998888999999999999999999996444444 67999999999999999776677888876 48899999
Q ss_pred CcCcC
Q 042931 286 NSLIG 290 (471)
Q Consensus 286 N~l~g 290 (471)
|.+..
T Consensus 199 N~~~C 203 (361)
T 2xot_A 199 NPLEC 203 (361)
T ss_dssp SCEEC
T ss_pred CCccC
Confidence 98763
No 92
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.9e-19 Score=192.16 Aligned_cols=173 Identities=26% Similarity=0.418 Sum_probs=125.5
Q ss_pred CCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCE
Q 042931 129 SCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKN 208 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~ 208 (471)
..|++|+.|++++|.+.. +| .+..+++|+.|+|++|.+++..| +.++++|+.|+|++|.+++ +| .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 345667777777777654 33 57777888888888888775433 7777888888888887764 33 6777788888
Q ss_pred EEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcC
Q 042931 209 MGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSL 288 (471)
Q Consensus 209 L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 288 (471)
|+|++|.+++ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+
T Consensus 114 L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 8888887774 3 3477777888888888877764 567777888888888888776555 77777888888888877
Q ss_pred cCCCchhhhcCCCCCcccCCCCcCccc
Q 042931 289 IGPIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 289 ~g~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
.+. | .+..+++|+.|+|++|++++.
T Consensus 188 ~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 188 SDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred CCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 753 3 477777888888888877654
No 93
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=1e-19 Score=166.61 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=77.9
Q ss_pred CCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEE
Q 042931 154 ALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMEL 233 (471)
Q Consensus 154 ~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 233 (471)
.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++++++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3444555555555554 334 3445555555555555332 22345555555555555555554445555555555555
Q ss_pred eCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCc
Q 042931 234 DLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 234 ~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~ 313 (471)
++++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|++|++++|.+++ ++ .+..+++|+.|++++|++.
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 555555555555555555555555555555222333 35555555555555555554 22 4555566666666666553
No 94
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=7.5e-20 Score=167.55 Aligned_cols=156 Identities=21% Similarity=0.237 Sum_probs=137.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
.+.+++|+.|++++|.+. .+| .+..+++|++|++++|.++ .++.+.++++|++|++++|.+++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 456789999999999998 667 7999999999999999775 345799999999999999999988899999999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++..|..++++++|++|++++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999998889999999999999999998555677 68999999999999999986 44 78899999999999999
Q ss_pred CcC
Q 042931 288 LIG 290 (471)
Q Consensus 288 l~g 290 (471)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 754
No 95
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.81 E-value=1.8e-21 Score=196.94 Aligned_cols=188 Identities=20% Similarity=0.259 Sum_probs=116.3
Q ss_pred CCCCCCCEEEcCCCCCCc----cCchhccCCCCCCEEeccCCCCCCcCCcc----cCCC---------CCCcEEEcccCC
Q 042931 129 SCFPNLENLTFQSFPLAG----SIPPEISALSKLQRLDLSSNRLTGSIPSE----IGNL---------RNLVYLNISKNI 191 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g----~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~----l~~L---------~~L~~L~L~~N~ 191 (471)
..+++|++|+|++|.+.+ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 556667777777766665 35666666667777777777665332222 2223 667777777776
Q ss_pred CC-CCCC---CccCCCCCcCEEEccCCCCC--C---CCcccccCCCCCCEEeCCCCccc----cccccccCCCCCCCEEE
Q 042931 192 LT-GTVP---STLGSLTNLKNMGLSYNQLS--G---PLPQEIGNLKNLMELDLGTNSLI----GPIPSTLGRLTNLNYMS 258 (471)
Q Consensus 192 l~-g~~p---~~l~~l~~L~~L~L~~N~l~--g---~~p~~l~~l~~L~~L~Ls~N~l~----g~ip~~l~~l~~L~~L~ 258 (471)
++ +.+| ..+..+++|++|++++|.++ | .+|..+.++++|++|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 65 3344 34556667777777777665 2 23335666667777777777765 55666666667777777
Q ss_pred CCCCcCCCC----Ccccc--cCCCCCCEEeccCCcCcC----CCchhh-hcCCCCCcccCCCCcCcccc
Q 042931 259 LSRNMFGGL----LPQEI--GNLKNLIELNVGSNSLIG----PIPSTL-GLLTDLSYLDLSCNQFSSSI 316 (471)
Q Consensus 259 L~~N~l~g~----~p~~l--~~l~~L~~L~L~~N~l~g----~ip~~l-~~l~~L~~L~l~~N~l~g~i 316 (471)
+++|.+++. +|..+ +.+++|++|++++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 777766654 44454 236667777777777665 366555 45667777777777766554
No 96
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=5.4e-19 Score=187.02 Aligned_cols=164 Identities=26% Similarity=0.426 Sum_probs=141.7
Q ss_pred CCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEcc
Q 042931 133 NLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLS 212 (471)
Q Consensus 133 ~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~ 212 (471)
+|+.|++++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 888764 89999999999998 688 567999999999999997 787 665 99999999
Q ss_pred CCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCC
Q 042931 213 YNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPI 292 (471)
Q Consensus 213 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~i 292 (471)
+|.+++ +|. .+++|++|++++|.+++ +|. .+++|+.|++++|.+++ +|. +. ++|+.|+|++|+++ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999997 777 68999999999999997 776 67899999999999997 777 66 89999999999998 67
Q ss_pred chhhhcCCCC-------CcccCCCCcCcccccccccccc
Q 042931 293 PSTLGLLTDL-------SYLDLSCNQFSSSIPNDTTKLL 324 (471)
Q Consensus 293 p~~l~~l~~L-------~~L~l~~N~l~g~ip~~~~~l~ 324 (471)
|. +.. +| +.|++++|+++ .+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~ 230 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLD 230 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSC
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCC
Confidence 76 554 77 99999999998 5888766543
No 97
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.80 E-value=3.1e-21 Score=195.15 Aligned_cols=193 Identities=19% Similarity=0.243 Sum_probs=160.6
Q ss_pred cCCCCCCCEEEcCCC---CCCccCchhc-------cCCCCCCEEeccCCCCCC----cCCcccCCCCCCcEEEcccCCCC
Q 042931 128 FSCFPNLENLTFQSF---PLAGSIPPEI-------SALSKLQRLDLSSNRLTG----SIPSEIGNLRNLVYLNISKNILT 193 (471)
Q Consensus 128 l~~l~~L~~L~L~~n---~l~g~ip~~l-------~~L~~L~~L~Ls~N~l~g----~iP~~l~~L~~L~~L~L~~N~l~ 193 (471)
+..+++|+.|+|++| .+.+.+|..+ ..+++|++|+|++|.+++ .+|..+.++++|++|+|++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 667899999999985 5667788766 789999999999999987 47888899999999999999987
Q ss_pred CCCCCcc----CCC---------CCcCEEEccCCCCC-CCCc---ccccCCCCCCEEeCCCCccc--c---ccccccCCC
Q 042931 194 GTVPSTL----GSL---------TNLKNMGLSYNQLS-GPLP---QEIGNLKNLMELDLGTNSLI--G---PIPSTLGRL 251 (471)
Q Consensus 194 g~~p~~l----~~l---------~~L~~L~L~~N~l~-g~~p---~~l~~l~~L~~L~Ls~N~l~--g---~ip~~l~~l 251 (471)
+..+..+ ..+ ++|++|++++|.++ +.+| ..+..+++|++|++++|.++ | .+|..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 5444433 334 89999999999997 4555 46778899999999999987 3 355588899
Q ss_pred CCCCEEECCCCcCC----CCCcccccCCCCCCEEeccCCcCcCC----Cchhhhc--CCCCCcccCCCCcCcc----ccc
Q 042931 252 TNLNYMSLSRNMFG----GLLPQEIGNLKNLIELNVGSNSLIGP----IPSTLGL--LTDLSYLDLSCNQFSS----SIP 317 (471)
Q Consensus 252 ~~L~~L~L~~N~l~----g~~p~~l~~l~~L~~L~L~~N~l~g~----ip~~l~~--l~~L~~L~l~~N~l~g----~ip 317 (471)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. +|..+.. +++|+.|++++|.+++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 99999999999986 66888899999999999999999876 5666643 8999999999999988 466
Q ss_pred ccc
Q 042931 318 NDT 320 (471)
Q Consensus 318 ~~~ 320 (471)
..+
T Consensus 296 ~~l 298 (386)
T 2ca6_A 296 TVI 298 (386)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 98
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.79 E-value=3.9e-19 Score=177.58 Aligned_cols=183 Identities=19% Similarity=0.139 Sum_probs=139.2
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCc-ccCCCCCCcE-EEcccCCCCCCCCCccCCCCCcCEE
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPS-EIGNLRNLVY-LNISKNILTGTVPSTLGSLTNLKNM 209 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~-~l~~L~~L~~-L~L~~N~l~g~~p~~l~~l~~L~~L 209 (471)
+++++|+|++|.|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. ++++.|+++...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5789999999998854445688999999999999998777765 4678888765 5677788887778888999999999
Q ss_pred EccCCCCCCCCcccccCCCCCCEEeCCC-CccccccccccCCCC-CCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 210 GLSYNQLSGPLPQEIGNLKNLMELDLGT-NSLIGPIPSTLGRLT-NLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 210 ~L~~N~l~g~~p~~l~~l~~L~~L~Ls~-N~l~g~ip~~l~~l~-~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
++++|.+++..+..+....++..|++.+ |.+....+..+..+. .++.|++++|+++. +|.......+|+++++.+|+
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 9999999866666666777788888865 445443334555554 58889999999874 55555566788888887644
Q ss_pred CcCCCc-hhhhcCCCCCcccCCCCcCccc
Q 042931 288 LIGPIP-STLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 288 l~g~ip-~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
..+.+| ..|..+++|+.||+++|+++..
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 444555 4678889999999999988753
No 99
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.79 E-value=1.6e-20 Score=185.79 Aligned_cols=212 Identities=17% Similarity=0.160 Sum_probs=178.9
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCCCCCccccccccccCCC--CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCC
Q 042931 90 DHCKWIGFTCNSAGSIIGLHLSRDYGSFEEPVQLSQLNFSCF--PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNR 167 (471)
Q Consensus 90 ~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~l~~l~l~~l--~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~ 167 (471)
-|.+|.++.|+. ..++.++++... +.+. .+..+ ++++.|++++|.+.+..|. +..+++|++|++++|.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~--~~~~------~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~ 104 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKN--LHPD------VTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSV 104 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCB--CCHH------HHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCE
T ss_pred HHHHHHHHhcCc-hhheeecccccc--CCHH------HHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCC
Confidence 345799988863 346677776421 1111 13444 7899999999999887665 6689999999999999
Q ss_pred CCCc-CCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCC-CCCCC-CcccccCCCCCCEEeCCCC-ccccc
Q 042931 168 LTGS-IPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYN-QLSGP-LPQEIGNLKNLMELDLGTN-SLIGP 243 (471)
Q Consensus 168 l~g~-iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N-~l~g~-~p~~l~~l~~L~~L~Ls~N-~l~g~ 243 (471)
+++. +|..+.++++|++|++++|.+++..|..++.+++|++|++++| .+++. +|..+.++++|++|++++| .+++.
T Consensus 105 l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 105 IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp ECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred cCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9876 8888999999999999999999888999999999999999999 67753 7777889999999999999 88865
Q ss_pred -cccccCCCC-CCCEEECCCC--cCC-CCCcccccCCCCCCEEeccCCc-CcCCCchhhhcCCCCCcccCCCCc
Q 042931 244 -IPSTLGRLT-NLNYMSLSRN--MFG-GLLPQEIGNLKNLIELNVGSNS-LIGPIPSTLGLLTDLSYLDLSCNQ 311 (471)
Q Consensus 244 -ip~~l~~l~-~L~~L~L~~N--~l~-g~~p~~l~~l~~L~~L~L~~N~-l~g~ip~~l~~l~~L~~L~l~~N~ 311 (471)
++..+..++ +|++|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|+.|++++|.
T Consensus 185 ~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 185 HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 788889999 9999999999 565 5677788899999999999999 777888899999999999999996
No 100
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.78 E-value=4e-20 Score=182.16 Aligned_cols=202 Identities=17% Similarity=0.188 Sum_probs=166.3
Q ss_pred CCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCC
Q 042931 103 GSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNL 182 (471)
Q Consensus 103 ~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L 182 (471)
.++..|+++... +.. ..+++.+++|++|++++|.+++. ...++|++|++++|.+++..+. .+++|
T Consensus 58 ~~L~~L~Ls~n~--l~~-----~~~~~~l~~L~~L~Ls~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L 122 (317)
T 3o53_A 58 TKLELLNLSSNV--LYE-----TLDLESLSTLRTLDLNNNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGK 122 (317)
T ss_dssp TTCCEEECTTSC--CEE-----EEEETTCTTCCEEECCSSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSC
T ss_pred CcCCEEECCCCc--CCc-----chhhhhcCCCCEEECcCCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCC
Confidence 456677776421 110 11278899999999999998753 2348999999999999975443 46889
Q ss_pred cEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccc-cCCCCCCEEeCCCCccccccccccCCCCCCCEEECCC
Q 042931 183 VYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEI-GNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSR 261 (471)
Q Consensus 183 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l-~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~ 261 (471)
++|++++|.+++..|..+..+++|++|++++|.+++..|..+ ..+++|++|++++|.+++. |. ...+++|++|++++
T Consensus 123 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~ 200 (317)
T 3o53_A 123 KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSS 200 (317)
T ss_dssp EEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCS
T ss_pred CEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCC
Confidence 999999999998888899999999999999999998777776 4789999999999999865 43 34589999999999
Q ss_pred CcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCc-cccccccccc
Q 042931 262 NMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS-SSIPNDTTKL 323 (471)
Q Consensus 262 N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~-g~ip~~~~~l 323 (471)
|.+++ +|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++. +.+|..+..+
T Consensus 201 N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~ 261 (317)
T 3o53_A 201 NKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (317)
T ss_dssp SCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTC
T ss_pred CcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhcc
Confidence 99996 4556999999999999999998 57888999999999999999998 6666655543
No 101
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=2.2e-18 Score=184.06 Aligned_cols=156 Identities=25% Similarity=0.373 Sum_probs=139.2
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|+|++|.+.+..| +..+++|+.|+|++|.+++ +| .+.++++|++|+|++|.+.+ + +.+..+++|+
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~ 134 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLE 134 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCS
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccC
Confidence 7788999999999999987554 8999999999999999986 44 79999999999999999986 3 4699999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++. | .+..+++|+.|+|++|.
T Consensus 135 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 135 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEE
T ss_pred EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCc
Confidence 999999999865 679999999999999999998766 89999999999999999864 4 68999999999999999
Q ss_pred CcCCCchh
Q 042931 288 LIGPIPST 295 (471)
Q Consensus 288 l~g~ip~~ 295 (471)
+.+.....
T Consensus 209 l~~~p~~~ 216 (605)
T 1m9s_A 209 CLNKPINH 216 (605)
T ss_dssp EECCCCCC
T ss_pred CcCCcccc
Confidence 98754433
No 102
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.78 E-value=6.2e-19 Score=172.07 Aligned_cols=109 Identities=27% Similarity=0.523 Sum_probs=91.3
Q ss_pred cccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
++|.+.+.||+|+||+||+|++. ++..||||+++.... ...++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH---HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh---HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 46778899999999999999863 477899999986542 335789999999999999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcCC----------CCccCCHHHHHHHHhcC
Q 042931 434 MFLIYEYMEGGSLFCNLHNNE----------EAVELDWAKRVNIVKAM 471 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~----------~~~~l~w~~rl~ia~gv 471 (471)
.+||||||++|||.++|+.++ ....++|..+++|+.+|
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 137 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHH
Confidence 999999999999999998642 24579999999988653
No 103
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=2.4e-19 Score=171.94 Aligned_cols=170 Identities=22% Similarity=0.304 Sum_probs=119.7
Q ss_pred CCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEE
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMG 210 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 210 (471)
+.++..++++++.+.+. + .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 34455566666766543 2 4667777888888887776 355 57777788888888887775443 77778888888
Q ss_pred ccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcC
Q 042931 211 LSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIG 290 (471)
Q Consensus 211 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g 290 (471)
+++|.+++ +|... . ++|++|++++|.+++ +| .+..+++|+.|++++|++++. | .+..+++|++|++++|++.+
T Consensus 92 L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 88887774 44422 2 778888888887775 33 477778888888888887753 3 57777788888888887776
Q ss_pred CCchhhhcCCCCCcccCCCCcCccc
Q 042931 291 PIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 291 ~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
. ..+..+++|+.|++++|++++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 5 5577777788888888877655
No 104
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3.1e-18 Score=166.65 Aligned_cols=153 Identities=25% Similarity=0.374 Sum_probs=136.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|++++|.+.+..| +..+++|++|++++|.+++ +| .+.++++|++|++++|.+++. +.+..+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCC
Confidence 6778999999999999987544 9999999999999999986 44 499999999999999999864 5789999999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|.
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCc
Confidence 999999999865 678999999999999999997655 8999999999999999986 45 48999999999999999
Q ss_pred CcCCC
Q 042931 288 LIGPI 292 (471)
Q Consensus 288 l~g~i 292 (471)
+....
T Consensus 212 i~~~~ 216 (291)
T 1h6t_A 212 CLNKP 216 (291)
T ss_dssp EECCC
T ss_pred ccCCc
Confidence 87643
No 105
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.6e-21 Score=207.04 Aligned_cols=184 Identities=19% Similarity=0.200 Sum_probs=156.3
Q ss_pred ccCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCC-------------CCCcCCcccCCCCCCcEEE-cccCCC
Q 042931 127 NFSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNR-------------LTGSIPSEIGNLRNLVYLN-ISKNIL 192 (471)
Q Consensus 127 ~l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~-------------l~g~iP~~l~~L~~L~~L~-L~~N~l 192 (471)
|+..+++|+.|+|++|.+. .+|++++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 344 d~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~ 422 (567)
T 1dce_A 344 DSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL 422 (567)
T ss_dssp CCSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH
T ss_pred ccccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc
Confidence 3577899999999999985 789999999999999998775 6777888888999999988 565543
Q ss_pred CCCCCC------ccCC--CCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcC
Q 042931 193 TGTVPS------TLGS--LTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMF 264 (471)
Q Consensus 193 ~g~~p~------~l~~--l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l 264 (471)
. .++. .+.. ...|++|+|++|.+++ +|. ++++++|+.|+|++|.++ .+|..++++++|+.|+|++|.+
T Consensus 423 ~-~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 498 (567)
T 1dce_A 423 D-DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNAL 498 (567)
T ss_dssp H-HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCC
T ss_pred c-hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCC
Confidence 2 1110 0111 1258999999999985 776 999999999999999998 7899999999999999999999
Q ss_pred CCCCcccccCCCCCCEEeccCCcCcCCC-chhhhcCCCCCcccCCCCcCccccc
Q 042931 265 GGLLPQEIGNLKNLIELNVGSNSLIGPI-PSTLGLLTDLSYLDLSCNQFSSSIP 317 (471)
Q Consensus 265 ~g~~p~~l~~l~~L~~L~L~~N~l~g~i-p~~l~~l~~L~~L~l~~N~l~g~ip 317 (471)
++ +| .++++++|+.|+|++|++++.+ |..++.+++|+.|++++|++++.+|
T Consensus 499 ~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 499 EN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 97 67 8999999999999999999887 9999999999999999999998655
No 106
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.77 E-value=2.6e-18 Score=177.70 Aligned_cols=175 Identities=25% Similarity=0.359 Sum_probs=130.0
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
++.+++|+.|++++|.+.+ +|.. .++|++|++++|.++ .+|. ++++++|++|++++|++++ +|.. +++|+
T Consensus 191 ~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~ 260 (454)
T 1jl5_A 191 LQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLE 260 (454)
T ss_dssp CTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCC
T ss_pred ccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccC
Confidence 6778889999999998886 5543 258888888888887 6774 8888888888888888875 5543 36778
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCcccc--ccccccC-------------CC-CCCCEEECCCCcCCCCCccc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIG--PIPSTLG-------------RL-TNLNYMSLSRNMFGGLLPQE 271 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~ip~~l~-------------~l-~~L~~L~L~~N~l~g~~p~~ 271 (471)
+|++++|.+++ +|.. +++|++|++++|.+++ .+|..+. .+ ++|+.|++++|++++ +|..
T Consensus 261 ~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~ 335 (454)
T 1jl5_A 261 ALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL 335 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC
T ss_pred EEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc
Confidence 88888887774 5543 2566677777776665 3332221 22 478888999888886 6654
Q ss_pred ccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCcc--cccccccccc
Q 042931 272 IGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSS--SIPNDTTKLL 324 (471)
Q Consensus 272 l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g--~ip~~~~~l~ 324 (471)
+++|++|++++|+++ .+|. .+++|++|++++|++++ .+|.++..+.
T Consensus 336 ---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~ 383 (454)
T 1jl5_A 336 ---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLR 383 (454)
T ss_dssp ---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEE
T ss_pred ---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhh
Confidence 578999999999988 4666 47889999999999998 7888877663
No 107
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.77 E-value=6.8e-18 Score=174.55 Aligned_cols=161 Identities=30% Similarity=0.406 Sum_probs=114.0
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|++|++++|.+.+ +| .++++++|++|++++|++++ +|..+ .+|++|++++|.+++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 578888888888876 67 58888888888888888875 66543 478888888888876 55 5788888888888
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCC
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGP 291 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ 291 (471)
++|.+++ +|... ++|++|++++|.++ .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++.+
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~- 271 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD- 271 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-
Confidence 8888774 45432 47777788777776 5663 7777788888888877775 4432 3567777777777665
Q ss_pred CchhhhcCCCCCcccCCCCcCcc
Q 042931 292 IPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 292 ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
+|.. .++|+.|++++|++++
T Consensus 272 l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 272 LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSE
T ss_pred cCcc---cCcCCEEECcCCccCc
Confidence 4432 2556666666666665
No 108
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.77 E-value=9.6e-19 Score=173.03 Aligned_cols=109 Identities=23% Similarity=0.514 Sum_probs=92.9
Q ss_pred cccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
.+|.+.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|++++++++|||||+++|+|.+.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH---HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 46777889999999999999864 478999999986542 335789999999999999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcCCC------------CccCCHHHHHHHHhcC
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEE------------AVELDWAKRVNIVKAM 471 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~------------~~~l~w~~rl~ia~gv 471 (471)
.+||||||++|+|.++|+.+.. ..+++|..+++|+.+|
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 167 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHH
Confidence 9999999999999999986432 2469999999988653
No 109
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.77 E-value=2.7e-18 Score=183.76 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=25.5
Q ss_pred CCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCC
Q 042931 130 CFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTG 170 (471)
Q Consensus 130 ~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g 170 (471)
.+++|++|+|++|.+++ +|. .+++|++|+|++|.+++
T Consensus 79 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 115 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH 115 (622)
T ss_dssp CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC
T ss_pred cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC
Confidence 35678888888887763 554 56677777777777664
No 110
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.76 E-value=7.2e-20 Score=183.71 Aligned_cols=193 Identities=19% Similarity=0.218 Sum_probs=142.5
Q ss_pred CCCCCCCEEEcCCCCCCccCc----hhccCCC-CCCEEeccCCCCCCcCCcccCCC-----CCCcEEEcccCCCCCCCCC
Q 042931 129 SCFPNLENLTFQSFPLAGSIP----PEISALS-KLQRLDLSSNRLTGSIPSEIGNL-----RNLVYLNISKNILTGTVPS 198 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~ip----~~l~~L~-~L~~L~Ls~N~l~g~iP~~l~~L-----~~L~~L~L~~N~l~g~~p~ 198 (471)
...++|++|+|++|.+.+..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+.
T Consensus 19 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 98 (362)
T 3goz_A 19 SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSD 98 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHH
T ss_pred hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHH
Confidence 344568899999988877666 6677888 89999999998887767666664 8899999999988876666
Q ss_pred ccCC----C-CCcCEEEccCCCCCCCCccccc----C-CCCCCEEeCCCCcccc----ccccccCCCC-CCCEEECCCCc
Q 042931 199 TLGS----L-TNLKNMGLSYNQLSGPLPQEIG----N-LKNLMELDLGTNSLIG----PIPSTLGRLT-NLNYMSLSRNM 263 (471)
Q Consensus 199 ~l~~----l-~~L~~L~L~~N~l~g~~p~~l~----~-l~~L~~L~Ls~N~l~g----~ip~~l~~l~-~L~~L~L~~N~ 263 (471)
.+.. + ++|++|++++|.+++..+..+. . .++|++|+|++|.++. .++..+..++ +|++|++++|.
T Consensus 99 ~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 99 ELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCC
Confidence 4433 3 7899999999988866655443 3 3688999999998875 3444555555 88999999998
Q ss_pred CCCCCccccc----CC-CCCCEEeccCCcCcCC----CchhhhcC-CCCCcccCCCCcCccccccccc
Q 042931 264 FGGLLPQEIG----NL-KNLIELNVGSNSLIGP----IPSTLGLL-TDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 264 l~g~~p~~l~----~l-~~L~~L~L~~N~l~g~----ip~~l~~l-~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
+++..+..+. .. ++|++|++++|.+.+. ++..+... ++|+.|++++|++++..+..+.
T Consensus 179 l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 179 LASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred CchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 8877665443 34 5899999999988763 45555553 4889999999988776554333
No 111
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=5.4e-18 Score=154.59 Aligned_cols=130 Identities=24% Similarity=0.331 Sum_probs=82.9
Q ss_pred EEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCc-ccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCC
Q 042931 137 LTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPS-EIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQ 215 (471)
Q Consensus 137 L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~-~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 215 (471)
+++++|.+ +.+|..+.. +|++|++++|.+++..|. .++++++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 13 l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 33444444 345554433 667777777777654443 26667777777777777766666666677777777777777
Q ss_pred CCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCc
Q 042931 216 LSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLP 269 (471)
Q Consensus 216 l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p 269 (471)
+++..|..+.++++|++|+|++|++++.+|..+..+++|++|++++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 766666666666777777777777666666666666666666666666665543
No 112
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.76 E-value=8.9e-19 Score=171.67 Aligned_cols=109 Identities=24% Similarity=0.364 Sum_probs=90.0
Q ss_pred ccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 361 DFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
++.+.+.||+|+||+||+|.+. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+++..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 4566788999999999999863 4678999999754322 2346799999999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHhcC
Q 042931 435 FLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVKAM 471 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~gv 471 (471)
+||||||++|||.++|+.+.. ...++|..+++|+.+|
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 154 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 154 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHH
Confidence 999999999999999985421 2468999999988653
No 113
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.1e-19 Score=196.19 Aligned_cols=186 Identities=26% Similarity=0.252 Sum_probs=126.2
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCE-----EeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQR-----LDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNL 206 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~-----L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L 206 (471)
+.++.|+|.+|.+.. +|..+....+|.. ++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 456778888887765 3443333223322 333444444 45778999999999999999998 788888899999
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 207 KNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 207 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..|+++++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 89999999999999999999999 78999999999999999999997 78999999999999999999
Q ss_pred cCcCCCchhhhcCCC-CCcccCCCCcCccccccccccc
Q 042931 287 SLIGPIPSTLGLLTD-LSYLDLSCNQFSSSIPNDTTKL 323 (471)
Q Consensus 287 ~l~g~ip~~l~~l~~-L~~L~l~~N~l~g~ip~~~~~l 323 (471)
.+++.+|..+..+.. +..+++++|.++|.+|..+..+
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 999999988765432 2347788888888888765543
No 114
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.75 E-value=1.1e-17 Score=178.95 Aligned_cols=87 Identities=25% Similarity=0.299 Sum_probs=69.9
Q ss_pred CCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccC
Q 042931 228 KNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDL 307 (471)
Q Consensus 228 ~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l 307 (471)
++|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|+.|++++|+++ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 677888888888775 55 45678888888888887 4565 5678999999999988 77888999999999999
Q ss_pred CCCcCccccccccccc
Q 042931 308 SCNQFSSSIPNDTTKL 323 (471)
Q Consensus 308 ~~N~l~g~ip~~~~~l 323 (471)
++|++++.+|..+..+
T Consensus 292 ~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 292 EGNPLSERTLQALREI 307 (622)
T ss_dssp CSCCCCHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhc
Confidence 9999998887765544
No 115
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=8.4e-18 Score=153.32 Aligned_cols=132 Identities=25% Similarity=0.339 Sum_probs=110.5
Q ss_pred CEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCC-ccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCC
Q 042931 159 QRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPS-TLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGT 237 (471)
Q Consensus 159 ~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~-~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 237 (471)
+++++++|.++ .+|..+.. +|++|++++|.+++..+. .+.++++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68899999885 68876654 889999999998866554 488889999999999999888888888888999999999
Q ss_pred CccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCc
Q 042931 238 NSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIP 293 (471)
Q Consensus 238 N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip 293 (471)
|.+++..|..|.++++|++|++++|++++..|..+..+++|++|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 98888777778888888888888888888888888888888888888888877654
No 116
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=8.8e-18 Score=149.46 Aligned_cols=133 Identities=23% Similarity=0.218 Sum_probs=77.2
Q ss_pred CCCCCEEEcCCCCCC-ccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEE
Q 042931 131 FPNLENLTFQSFPLA-GSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNM 209 (471)
Q Consensus 131 l~~L~~L~L~~n~l~-g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 209 (471)
.++|+.|++++|.+. +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 355666666666665 56666666666666666666666543 455666666666666666665555555556666666
Q ss_pred EccCCCCCCCC-cccccCCCCCCEEeCCCCccccccc---cccCCCCCCCEEECCCCcCC
Q 042931 210 GLSYNQLSGPL-PQEIGNLKNLMELDLGTNSLIGPIP---STLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 210 ~L~~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~g~ip---~~l~~l~~L~~L~L~~N~l~ 265 (471)
++++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666665321 1455555566666666665554333 24555555555555555543
No 117
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.4e-17 Score=159.52 Aligned_cols=152 Identities=21% Similarity=0.288 Sum_probs=132.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
+..+++|+.|++++|.+. .+| .+..+++|++|+|++|++++ +|+ +.++++|++|++++|++++ +|.. .. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcc-cc-Cccc
Confidence 556789999999999987 456 78999999999999999996 444 9999999999999999986 4543 33 9999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
+|++++|.+++ +| .+.++++|++|++++|++++. | .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.
T Consensus 110 ~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 99999999986 44 599999999999999999874 4 688999999999999999976 678999999999999999
Q ss_pred CcCCC
Q 042931 288 LIGPI 292 (471)
Q Consensus 288 l~g~i 292 (471)
+.+..
T Consensus 184 ~~~~~ 188 (263)
T 1xeu_A 184 CVNEP 188 (263)
T ss_dssp EECCC
T ss_pred ccCCc
Confidence 98663
No 118
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=5.7e-17 Score=145.53 Aligned_cols=111 Identities=24% Similarity=0.255 Sum_probs=50.7
Q ss_pred CCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEc
Q 042931 132 PNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGL 211 (471)
Q Consensus 132 ~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 211 (471)
++|+.|++++|.+.+..+..++.+++|++|++++|.+++..+..++++++|++|++++|.+++..+..+.++++|++|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555554433333445555555555555554333333444455555555555544433333444444444444
Q ss_pred cCCCCCCCCcccccCCCCCCEEeCCCCcccc
Q 042931 212 SYNQLSGPLPQEIGNLKNLMELDLGTNSLIG 242 (471)
Q Consensus 212 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 242 (471)
++|.+++..+..+..+++|++|++++|.+++
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 4444443222223444444444444444443
No 119
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.72 E-value=6.5e-19 Score=176.71 Aligned_cols=180 Identities=24% Similarity=0.251 Sum_probs=149.9
Q ss_pred EEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCC----cccCCCC-CCcEEEcccCCCCCCCCCccCCC-----CC
Q 042931 136 NLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIP----SEIGNLR-NLVYLNISKNILTGTVPSTLGSL-----TN 205 (471)
Q Consensus 136 ~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP----~~l~~L~-~L~~L~L~~N~l~g~~p~~l~~l-----~~ 205 (471)
.++++.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788999999999888888889999999999987655 6778898 99999999999998878777775 99
Q ss_pred cCEEEccCCCCCCCCccccc----CC-CCCCEEeCCCCcccccccccc----CC-CCCCCEEECCCCcCCCCCc----cc
Q 042931 206 LKNMGLSYNQLSGPLPQEIG----NL-KNLMELDLGTNSLIGPIPSTL----GR-LTNLNYMSLSRNMFGGLLP----QE 271 (471)
Q Consensus 206 L~~L~L~~N~l~g~~p~~l~----~l-~~L~~L~Ls~N~l~g~ip~~l----~~-l~~L~~L~L~~N~l~g~~p----~~ 271 (471)
|++|+|++|.+++..+..++ .+ ++|++|++++|.+++..+..+ .. .++|++|++++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999987776544 44 899999999999987666544 34 3699999999999986443 34
Q ss_pred ccCCC-CCCEEeccCCcCcCCCchhhhc----C-CCCCcccCCCCcCccc
Q 042931 272 IGNLK-NLIELNVGSNSLIGPIPSTLGL----L-TDLSYLDLSCNQFSSS 315 (471)
Q Consensus 272 l~~l~-~L~~L~L~~N~l~g~ip~~l~~----l-~~L~~L~l~~N~l~g~ 315 (471)
+..++ +|++|++++|++++..+..+.. . ++|+.|++++|.+++.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 45565 9999999999999888765554 4 6999999999999863
No 120
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.9e-17 Score=147.33 Aligned_cols=133 Identities=25% Similarity=0.228 Sum_probs=95.3
Q ss_pred CCCCCEEeccCCCCC-CcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEE
Q 042931 155 LSKLQRLDLSSNRLT-GSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMEL 233 (471)
Q Consensus 155 L~~L~~L~Ls~N~l~-g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L 233 (471)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 67777777888888888888887754 667778888888888888876677777677777777
Q ss_pred eCCCCccccc-cccccCCCCCCCEEECCCCcCCCCCc---ccccCCCCCCEEeccCCcCc
Q 042931 234 DLGTNSLIGP-IPSTLGRLTNLNYMSLSRNMFGGLLP---QEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 234 ~Ls~N~l~g~-ip~~l~~l~~L~~L~L~~N~l~g~~p---~~l~~l~~L~~L~L~~N~l~ 289 (471)
++++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777653 22566677777777777777665433 35566666666666666554
No 121
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.72 E-value=1e-17 Score=145.99 Aligned_cols=107 Identities=26% Similarity=0.317 Sum_probs=46.8
Q ss_pred CCCEEeccCCCCC-CcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeC
Q 042931 157 KLQRLDLSSNRLT-GSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDL 235 (471)
Q Consensus 157 ~L~~L~Ls~N~l~-g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 235 (471)
+|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+.++++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444444 34444444444444444444444432 33444444444444444444434444444444444444
Q ss_pred CCCccccc-cccccCCCCCCCEEECCCCcCC
Q 042931 236 GTNSLIGP-IPSTLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 236 s~N~l~g~-ip~~l~~l~~L~~L~L~~N~l~ 265 (471)
++|.+++. .|..++.+++|++|++++|.++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 44444431 2233444444444444444443
No 122
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=2.5e-17 Score=143.46 Aligned_cols=129 Identities=20% Similarity=0.245 Sum_probs=117.9
Q ss_pred CCCCcEEEcccCCCC-CCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEE
Q 042931 179 LRNLVYLNISKNILT-GTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYM 257 (471)
Q Consensus 179 L~~L~~L~L~~N~l~-g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L 257 (471)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 89999999999999999999999866 779999999999999999998899988889999999
Q ss_pred ECCCCcCCCC-CcccccCCCCCCEEeccCCcCcCCCc---hhhhcCCCCCcccCCC
Q 042931 258 SLSRNMFGGL-LPQEIGNLKNLIELNVGSNSLIGPIP---STLGLLTDLSYLDLSC 309 (471)
Q Consensus 258 ~L~~N~l~g~-~p~~l~~l~~L~~L~L~~N~l~g~ip---~~l~~l~~L~~L~l~~ 309 (471)
++++|.+++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999873 45789999999999999999998776 5789999999999864
No 123
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.70 E-value=3e-17 Score=160.46 Aligned_cols=106 Identities=26% Similarity=0.485 Sum_probs=87.8
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
+++.+.+.||+|+||+||+|++.+ .||||+++..... ....+.|.+|++++++++|||||+++|+|.+ +..+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 466778899999999999998743 5899999754432 2345789999999999999999999999864 56899999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHhcC
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVKAM 471 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~gv 471 (471)
||++|+|.++|+... .+++|..+++|+.+|
T Consensus 112 y~~gGsL~~~l~~~~--~~l~~~~~~~i~~qi 141 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE--TKFQMFQLIDIARQT 141 (307)
T ss_dssp CCSSCBHHHHHHTSC--CCCCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHhhcC--CCCCHHHHHHHHHHH
Confidence 999999999998643 358999999887653
No 124
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.70 E-value=3e-19 Score=189.52 Aligned_cols=174 Identities=21% Similarity=0.210 Sum_probs=145.0
Q ss_pred cCCCCCCCEEEcCCCC-------------CCccCchhccCCCCCCEEe-ccCCCCCCcCCc------ccCC--CCCCcEE
Q 042931 128 FSCFPNLENLTFQSFP-------------LAGSIPPEISALSKLQRLD-LSSNRLTGSIPS------EIGN--LRNLVYL 185 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~-------------l~g~ip~~l~~L~~L~~L~-Ls~N~l~g~iP~------~l~~--L~~L~~L 185 (471)
++++++|+.|++++|. +.|.+|..++.+++|+.|+ ++.|.+. .++. .+.. ...|+.|
T Consensus 368 i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l~l~~n~i~~l~~~~L~~L 446 (567)
T 1dce_A 368 LESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSKFLLENSVLKMEYADVRVL 446 (567)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhhhhhhcccccccCccCceEE
Confidence 6677889999987664 6778888899999999998 5655432 1110 0110 1359999
Q ss_pred EcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCC
Q 042931 186 NISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 186 ~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~ 265 (471)
+|++|.+++ +|. ++++++|++|+|++|.++ .+|..++++++|+.|+|++|.+++ +| .++++++|+.|+|++|+++
T Consensus 447 ~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~ 521 (567)
T 1dce_A 447 HLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQ 521 (567)
T ss_dssp ECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCC
T ss_pred EecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCC
Confidence 999999996 676 999999999999999999 899999999999999999999997 77 8999999999999999999
Q ss_pred CCC-cccccCCCCCCEEeccCCcCcCCCchh---hhcCCCCCcccC
Q 042931 266 GLL-PQEIGNLKNLIELNVGSNSLIGPIPST---LGLLTDLSYLDL 307 (471)
Q Consensus 266 g~~-p~~l~~l~~L~~L~L~~N~l~g~ip~~---l~~l~~L~~L~l 307 (471)
+.. |..++.+++|+.|++++|.+++.+|.. +..+++|+.|++
T Consensus 522 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 522 QSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 887 999999999999999999999876642 445888888864
No 125
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.69 E-value=4.9e-17 Score=159.12 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=84.1
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC----eee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK----CMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~ 435 (471)
+++.+.+.||+|+||+||+|++ +|+.||||+++..... ...+++|+..+.+++|||||+++|+|.+.+ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~----~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh----hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 3567788999999999999998 6899999999764321 123445777778999999999999998753 579
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||||++|+|.++|+.. +++|..+++|+.+
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ 108 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALS 108 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHH
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHH
Confidence 999999999999999864 4899999988765
No 126
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=3.9e-16 Score=140.05 Aligned_cols=109 Identities=22% Similarity=0.234 Sum_probs=43.8
Q ss_pred CCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECC
Q 042931 181 NLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLS 260 (471)
Q Consensus 181 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~ 260 (471)
+|++|++++|++++..+..+.++++|++|++++|.+++..+..+.++++|++|++++|.+++..+..+.++++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44444444444443333333444444444444444443333333444444444444444443333333344444444444
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcCc
Q 042931 261 RNMFGGLLPQEIGNLKNLIELNVGSNSLI 289 (471)
Q Consensus 261 ~N~l~g~~p~~l~~l~~L~~L~L~~N~l~ 289 (471)
+|.+++..+..+..+++|++|++++|.+.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 44443322222333334444444444333
No 127
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=3.4e-16 Score=142.87 Aligned_cols=107 Identities=29% Similarity=0.369 Sum_probs=47.7
Q ss_pred CCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECC
Q 042931 181 NLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLS 260 (471)
Q Consensus 181 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~ 260 (471)
+|++|+|++|.++ .+|..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444444444443 334444444444444444444443333444444444444444444444444444444444444444
Q ss_pred CCcCCCCCcccccCCCCCCEEeccCCcC
Q 042931 261 RNMFGGLLPQEIGNLKNLIELNVGSNSL 288 (471)
Q Consensus 261 ~N~l~g~~p~~l~~l~~L~~L~L~~N~l 288 (471)
+|.+++..+..|..+++|+.|++++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 4444433333344444444444444444
No 128
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.68 E-value=9.9e-19 Score=180.44 Aligned_cols=194 Identities=19% Similarity=0.160 Sum_probs=141.9
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhcc-----CCCCCCEEeccCCCCCCc----CCcccCCCCCCcEEEcccCCCCCCC--
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEIS-----ALSKLQRLDLSSNRLTGS----IPSEIGNLRNLVYLNISKNILTGTV-- 196 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~-----~L~~L~~L~Ls~N~l~g~----iP~~l~~L~~L~~L~L~~N~l~g~~-- 196 (471)
+..+++|+.|++++|.+.+..+..+. .+++|++|++++|.+++. +|..+..+++|++|++++|.+++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 45578899999998888765444443 366889999999988763 5677778888999999998876432
Q ss_pred ---CCccCCCCCcCEEEccCCCCCCC----CcccccCCCCCCEEeCCCCccccccccccC-----CCCCCCEEECCCCcC
Q 042931 197 ---PSTLGSLTNLKNMGLSYNQLSGP----LPQEIGNLKNLMELDLGTNSLIGPIPSTLG-----RLTNLNYMSLSRNMF 264 (471)
Q Consensus 197 ---p~~l~~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~-----~l~~L~~L~L~~N~l 264 (471)
+..+..+++|++|++++|.+++. ++..+.++++|++|++++|.+++..+..+. ..++|+.|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 22234678899999999888754 677777788899999998888755443332 236888888888888
Q ss_pred CCC----CcccccCCCCCCEEeccCCcCcCCCchhhhc-----CCCCCcccCCCCcCcc----ccccccc
Q 042931 265 GGL----LPQEIGNLKNLIELNVGSNSLIGPIPSTLGL-----LTDLSYLDLSCNQFSS----SIPNDTT 321 (471)
Q Consensus 265 ~g~----~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~-----l~~L~~L~l~~N~l~g----~ip~~~~ 321 (471)
++. +|..+..+++|++|++++|.+.+..+..+.. .++|+.|++++|++++ .+|..+.
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHH
Confidence 765 4566677788888888888887665554443 5688888888888875 5555443
No 129
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=3.9e-16 Score=142.44 Aligned_cols=126 Identities=24% Similarity=0.358 Sum_probs=92.0
Q ss_pred EEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCC
Q 042931 137 LTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQL 216 (471)
Q Consensus 137 L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 216 (471)
+++++|.+. .+|..+. ++|++|+|++|+++ .+|..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 334444443 4554432 47777888888776 5777777788888888888888776667778888888888888888
Q ss_pred CCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCC
Q 042931 217 SGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGG 266 (471)
Q Consensus 217 ~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g 266 (471)
++..|..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+..
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 77767777888888888888888876555567778888888888887754
No 130
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.67 E-value=1.4e-16 Score=158.17 Aligned_cols=94 Identities=23% Similarity=0.432 Sum_probs=77.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|.+.+.||+|+||+||+|.. .+|+.||||+++...... ...+.|.+|++++++++|||||++++++.+++..|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 46799999999999999999986 579999999997654332 3356899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcC
Q 042931 438 YEYMEGGSLFCNLHNN 453 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~ 453 (471)
||||++|+|+++|+..
T Consensus 102 mEy~~gg~L~~~i~~~ 117 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ 117 (350)
T ss_dssp EECCTTCBHHHHHHHT
T ss_pred EeCCCCCcHHHHHHHc
Confidence 9999999999999854
No 131
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.66 E-value=1.1e-18 Score=180.04 Aligned_cols=193 Identities=19% Similarity=0.145 Sum_probs=155.0
Q ss_pred CCCCCCCEEEcCCCCCCcc----CchhccCCCCCCEEeccCCCCCCcCCcccC-----CCCCCcEEEcccCCCCCC----
Q 042931 129 SCFPNLENLTFQSFPLAGS----IPPEISALSKLQRLDLSSNRLTGSIPSEIG-----NLRNLVYLNISKNILTGT---- 195 (471)
Q Consensus 129 ~~l~~L~~L~L~~n~l~g~----ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~-----~L~~L~~L~L~~N~l~g~---- 195 (471)
...++|++|++++|.+++. ++..+..+++|++|++++|.++...+..+. .+++|++|++++|.+++.
T Consensus 139 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 139 DPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred cCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHH
Confidence 3467899999999999874 466777889999999999998765444443 367999999999999874
Q ss_pred CCCccCCCCCcCEEEccCCCCCCCC-----cccccCCCCCCEEeCCCCccccc----cccccCCCCCCCEEECCCCcCCC
Q 042931 196 VPSTLGSLTNLKNMGLSYNQLSGPL-----PQEIGNLKNLMELDLGTNSLIGP----IPSTLGRLTNLNYMSLSRNMFGG 266 (471)
Q Consensus 196 ~p~~l~~l~~L~~L~L~~N~l~g~~-----p~~l~~l~~L~~L~Ls~N~l~g~----ip~~l~~l~~L~~L~L~~N~l~g 266 (471)
++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.++.. ++..+.++++|++|++++|.+++
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 5778889999999999999987532 22334689999999999999865 78888889999999999999875
Q ss_pred CCccccc-----CCCCCCEEeccCCcCcCC----CchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 267 LLPQEIG-----NLKNLIELNVGSNSLIGP----IPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 267 ~~p~~l~-----~l~~L~~L~L~~N~l~g~----ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
..+..+. ..++|++|++++|.+++. +|..+..+++|+.|++++|++++..+..+.
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 4444443 236999999999999876 567788889999999999999876554443
No 132
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.66 E-value=2.4e-16 Score=157.20 Aligned_cols=219 Identities=20% Similarity=0.158 Sum_probs=160.4
Q ss_pred CCcccceeeCCC----------CCEEEEEcCCCCCCCCccccccccccCCCCCCCEEEcCCCCCCccCch-hccCCCCCC
Q 042931 91 HCKWIGFTCNSA----------GSIIGLHLSRDYGSFEEPVQLSQLNFSCFPNLENLTFQSFPLAGSIPP-EISALSKLQ 159 (471)
Q Consensus 91 ~C~w~gv~C~~~----------~~v~~l~l~~~~~~~~~~~~l~~l~l~~l~~L~~L~L~~n~l~g~ip~-~l~~L~~L~ 159 (471)
.|+|..|.|+.. ..++.|+++... +. .+..-.|+++++|++|+|++|.+.+.+|. .|.++++++
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~--i~---~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~ 82 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTK--LR---VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLH 82 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCC--CS---EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCC
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCc--CC---CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhh
Confidence 378999999642 234555554321 10 11122388999999999999999888876 578899987
Q ss_pred E-EeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccC-CCCCCCCcccccCCC-CCCEEeCC
Q 042931 160 R-LDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSY-NQLSGPLPQEIGNLK-NLMELDLG 236 (471)
Q Consensus 160 ~-L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~-N~l~g~~p~~l~~l~-~L~~L~Ls 236 (471)
. +++++|+++...|..+.++++|++|++++|.+.+..+..+....++..|++.+ |.+....+..+..+. .++.|+|+
T Consensus 83 ~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 83 EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred hhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 5 66778999987788899999999999999999977777777888899999976 456543444566654 68899999
Q ss_pred CCccccccccccCCCCCCCEEECCCCcCCCCCc-ccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccc
Q 042931 237 TNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLP-QEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 237 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ 315 (471)
+|+++ .+|.......+|+.+++++|+..+.+| ..|..+++|++|++++|+++...+..+.++ +.|.+.++.--..
T Consensus 163 ~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L---~~L~~l~~~~l~~ 238 (350)
T 4ay9_X 163 KNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL---KKLRARSTYNLKK 238 (350)
T ss_dssp SSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC---CEEECTTCTTCCC
T ss_pred ccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccc---hHhhhccCCCcCc
Confidence 99998 477766677899999998644444565 467899999999999999986555455544 4444444433345
Q ss_pred ccc
Q 042931 316 IPN 318 (471)
Q Consensus 316 ip~ 318 (471)
+|.
T Consensus 239 lP~ 241 (350)
T 4ay9_X 239 LPT 241 (350)
T ss_dssp CCC
T ss_pred CCC
Confidence 553
No 133
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.65 E-value=1.1e-16 Score=156.30 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=83.3
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|++.+.||+|+||+||+|.. .+|+.||||+++..........+.+.+|++++++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999985 679999999997654433334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcC
Q 042931 439 EYMEGGSLFCNLHNN 453 (471)
Q Consensus 439 ey~~~GsL~~~L~~~ 453 (471)
|||++|+|++++++.
T Consensus 112 Ey~~gG~L~~~i~~~ 126 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI 126 (311)
T ss_dssp CCCTTEEHHHHHHHH
T ss_pred ecCCCCCHHHHHHHc
Confidence 999999999999864
No 134
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.65 E-value=4e-16 Score=152.23 Aligned_cols=107 Identities=19% Similarity=0.355 Sum_probs=85.2
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK------ 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------ 432 (471)
.+|++.+.||+|+||+||+|.. .+|+.||||+++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 4688999999999999999986 5799999999975442 233467899999999999999999999997644
Q ss_pred ------eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 433 ------CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 433 ------~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
..|||||||++|+|.++++......+.++....+|+
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~ 124 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHH
Confidence 368999999999999999976555556665544443
No 135
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.63 E-value=5.1e-16 Score=150.54 Aligned_cols=103 Identities=24% Similarity=0.358 Sum_probs=83.3
Q ss_pred cccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe----CCeeeE
Q 042931 362 FDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH----RKCMFL 436 (471)
Q Consensus 362 f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~l 436 (471)
+.....||+|+||+||+|.. .++..||+|++....... ...+.|.+|++++++++|||||+++++|.+ .+..+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 35567899999999999986 568999999997654332 335679999999999999999999999975 345799
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|||||++|+|.+++++.. .+++....+|+
T Consensus 107 vmEy~~gg~L~~~l~~~~---~l~~~~~~~~~ 135 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWC 135 (290)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHH
Confidence 999999999999998643 46666665544
No 136
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=1.1e-18 Score=160.00 Aligned_cols=130 Identities=25% Similarity=0.366 Sum_probs=64.0
Q ss_pred CCCCCEEEcCCCCCCccCch------hccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCC
Q 042931 131 FPNLENLTFQSFPLAGSIPP------EISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLT 204 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~------~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~ 204 (471)
...++.++++.+.+.|.+|. .++.+++|++|++++|.+++ +| .+.++++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34555555555555555554 55555555555555555554 44 4555555555555555554 3444444445
Q ss_pred CcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccc-cccCCCCCCCEEECCCCcCC
Q 042931 205 NLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIP-STLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 205 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~L~~N~l~ 265 (471)
+|++|++++|.+++ +| .+.++++|++|++++|.+++..+ ..+..+++|++|++++|.++
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 55555555555543 33 34444444444444444442111 23334444444444444433
No 137
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=1.5e-18 Score=159.02 Aligned_cols=155 Identities=20% Similarity=0.279 Sum_probs=135.5
Q ss_pred ccCCCCCCEEeccCCCCCCcCCc------ccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCccccc
Q 042931 152 ISALSKLQRLDLSSNRLTGSIPS------EIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIG 225 (471)
Q Consensus 152 l~~L~~L~~L~Ls~N~l~g~iP~------~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~ 225 (471)
+.....++.++++.+.++|.+|. .++++++|++|++++|.+++ +| .+.++++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999998887 89999999999999999986 77 8999999999999999998 7888888
Q ss_pred CCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCc-ccccCCCCCCEEeccCCcCcCCCchh---------
Q 042931 226 NLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLP-QEIGNLKNLIELNVGSNSLIGPIPST--------- 295 (471)
Q Consensus 226 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~--------- 295 (471)
.+++|++|++++|.+++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 88999999999999986 56 68889999999999999986322 47889999999999999998877653
Q ss_pred -hhcCCCCCcccCCCCcCc
Q 042931 296 -LGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 296 -l~~l~~L~~L~l~~N~l~ 313 (471)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 78899999987 56654
No 138
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.62 E-value=3e-16 Score=155.49 Aligned_cols=102 Identities=24% Similarity=0.396 Sum_probs=84.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
..|+..+.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|++++++++|||||+++++|.+++..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 3588889999999999999986 579999999997543222 356789999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|||++|+|.++++... +++.....|+
T Consensus 151 Ey~~gg~L~~~l~~~~----l~e~~~~~~~ 176 (346)
T 4fih_A 151 EFLEGGALTDIVTHTR----MNEEQIAAVC 176 (346)
T ss_dssp CCCTTEEHHHHHHHSC----CCHHHHHHHH
T ss_pred eCCCCCcHHHHHHcCC----CCHHHHHHHH
Confidence 9999999999998532 5555444443
No 139
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.61 E-value=1e-15 Score=147.21 Aligned_cols=94 Identities=23% Similarity=0.405 Sum_probs=76.3
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||+||+|.. .+|+.||||+++..........+.+.+|++++++++|||||++++++.+++..+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999985 579999999997655444444567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC
Q 042931 439 EYMEGGSLFCNLHNNE 454 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~ 454 (471)
||+ +|+|.+++.++.
T Consensus 93 Ey~-~g~L~~~l~~~~ 107 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD 107 (275)
T ss_dssp ECC-CEEHHHHHHHSC
T ss_pred eCC-CCCHHHHHHHcC
Confidence 999 689999998653
No 140
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.60 E-value=8.8e-16 Score=153.08 Aligned_cols=109 Identities=21% Similarity=0.316 Sum_probs=88.7
Q ss_pred cccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC-CCcccEEEEEEeC-
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH-RNIVKLYGFCLHR- 431 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~- 431 (471)
++|.+.+.||+|+||+||+|.+. .++.||||+++..... ...+.|.+|++++.+++| ||||+++|+|.+.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 57888899999999999999753 2468999999765433 234679999999999966 8999999999764
Q ss_pred CeeeEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHhc
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~g 470 (471)
+..+||||||++|+|.++|+..+. ...++|..+++|+.+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 193 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 193 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHH
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHH
Confidence 568999999999999999985421 345899999887654
No 141
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.59 E-value=9.6e-16 Score=151.36 Aligned_cols=101 Identities=21% Similarity=0.206 Sum_probs=84.6
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
....|...+.||+|+||+||+|.. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 345688888999999999999986 5699999999975432 2369999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||||++|+|.++|++.+ ++++.....|+.
T Consensus 128 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~ 157 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG---CLPEDRALYYLG 157 (336)
T ss_dssp EECCCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 999999999999998643 366666655543
No 142
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.6e-15 Score=136.04 Aligned_cols=130 Identities=22% Similarity=0.238 Sum_probs=65.9
Q ss_pred cCCCCCCEEeccCCCCCCcCCcccCCCC-CCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCC
Q 042931 153 SALSKLQRLDLSSNRLTGSIPSEIGNLR-NLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLM 231 (471)
Q Consensus 153 ~~L~~L~~L~Ls~N~l~g~iP~~l~~L~-~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 231 (471)
.++++|++|++++|.++. +|. +..+. +|++|++++|.+++. +.+..+++|++|++++|.+++..|..+..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344455555555555542 332 22222 555555555555432 3455555555555555555533223335555555
Q ss_pred EEeCCCCcccccccc--ccCCCCCCCEEECCCCcCCCCCccc----ccCCCCCCEEeccCCcC
Q 042931 232 ELDLGTNSLIGPIPS--TLGRLTNLNYMSLSRNMFGGLLPQE----IGNLKNLIELNVGSNSL 288 (471)
Q Consensus 232 ~L~Ls~N~l~g~ip~--~l~~l~~L~~L~L~~N~l~g~~p~~----l~~l~~L~~L~L~~N~l 288 (471)
+|++++|.++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 5555555553 3443 4555556666666666555 23432 55666666666666654
No 143
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.59 E-value=8.9e-16 Score=155.94 Aligned_cols=101 Identities=24% Similarity=0.400 Sum_probs=84.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
..|+..+.||+|+||.||+|.. .+|+.||||+++...... .+.+.+|++++++++|||||+++++|.+.+..||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 4588889999999999999986 579999999997543222 356789999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNI 467 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~i 467 (471)
|||++|+|.++++... ++......|
T Consensus 228 Ey~~gG~L~~~i~~~~----l~e~~~~~~ 252 (423)
T 4fie_A 228 EFLEGGALTDIVTHTR----MNEEQIAAV 252 (423)
T ss_dssp ECCTTEEHHHHHHHSC----CCHHHHHHH
T ss_pred eCCCCCcHHHHHhccC----CCHHHHHHH
Confidence 9999999999998542 444444443
No 144
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=3.7e-15 Score=133.59 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=113.7
Q ss_pred ccCCCCCCcEEEcccCCCCCCCCCccCCCC-CcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCC
Q 042931 175 EIGNLRNLVYLNISKNILTGTVPSTLGSLT-NLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTN 253 (471)
Q Consensus 175 ~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~-~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~ 253 (471)
.+.++.+|+.|++++|.++ .+|. +..+. +|++|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4667899999999999998 4565 55554 999999999999864 67899999999999999999654455589999
Q ss_pred CCEEECCCCcCCCCCcc--cccCCCCCCEEeccCCcCcCCCch----hhhcCCCCCcccCCCCcCc
Q 042931 254 LNYMSLSRNMFGGLLPQ--EIGNLKNLIELNVGSNSLIGPIPS----TLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 254 L~~L~L~~N~l~g~~p~--~l~~l~~L~~L~L~~N~l~g~ip~----~l~~l~~L~~L~l~~N~l~ 313 (471)
|++|++++|.++ .+|. .+..+++|+.|++++|.+. .+|. .+..+++|+.||++.|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999996 5666 7899999999999999998 4565 4899999999999999765
No 145
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.54 E-value=1.1e-15 Score=148.91 Aligned_cols=94 Identities=24% Similarity=0.408 Sum_probs=74.7
Q ss_pred cccccceeecCCccccEEEEEeC----CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
++|++.+.||+|+||+||+|+.. .++.||||+++....... ....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 57999999999999999999752 478999999976432211 1235778999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCC
Q 042931 436 LIYEYMEGGSLFCNLHNNE 454 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~ 454 (471)
||||||++|+|.+++++..
T Consensus 103 ivmEy~~gg~L~~~l~~~~ 121 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV 121 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC
T ss_pred EEEEcCCCCCHHHHHHhcC
Confidence 9999999999999998643
No 146
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=5e-14 Score=125.62 Aligned_cols=86 Identities=29% Similarity=0.291 Sum_probs=40.2
Q ss_pred CCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeC
Q 042931 156 SKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDL 235 (471)
Q Consensus 156 ~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L 235 (471)
++|++|+|++|++++..|..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555444444445555555555555554433333444444444444444444333333444444444444
Q ss_pred CCCccc
Q 042931 236 GTNSLI 241 (471)
Q Consensus 236 s~N~l~ 241 (471)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 444443
No 147
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=4.7e-14 Score=125.80 Aligned_cols=106 Identities=25% Similarity=0.293 Sum_probs=66.7
Q ss_pred CCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCC
Q 042931 158 LQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGT 237 (471)
Q Consensus 158 L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 237 (471)
.+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356677777666 3665553 6677777777777766666666666777777776666655444556666666666666
Q ss_pred CccccccccccCCCCCCCEEECCCCcCCC
Q 042931 238 NSLIGPIPSTLGRLTNLNYMSLSRNMFGG 266 (471)
Q Consensus 238 N~l~g~ip~~l~~l~~L~~L~L~~N~l~g 266 (471)
|++++..+..|.++++|++|++++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 66665444455666666666666665553
No 148
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.53 E-value=1.6e-14 Score=141.89 Aligned_cols=119 Identities=37% Similarity=0.652 Sum_probs=101.5
Q ss_pred cchhhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 349 RIVYEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 349 ~~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
.+.+.++..++++|...+.||+|+||.||+|...+|..||||++...... ..+.+.+|++++++++|||||+++++|
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 45667788899999999999999999999999888999999999765422 246788999999999999999999999
Q ss_pred EeCCeeeEEEeccCCCChhhhhhcCC-CCccCCHHHHHHHHhc
Q 042931 429 LHRKCMFLIYEYMEGGSLFCNLHNNE-EAVELDWAKRVNIVKA 470 (471)
Q Consensus 429 ~~~~~~~lV~ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia~g 470 (471)
.+.+..++||||+++|+|.++++... ....++|..+.+|+.+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 147 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHH
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHH
Confidence 99999999999999999999998654 2346899988887654
No 149
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=9.7e-14 Score=124.30 Aligned_cols=102 Identities=30% Similarity=0.356 Sum_probs=48.9
Q ss_pred EEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCC
Q 042931 137 LTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQL 216 (471)
Q Consensus 137 L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 216 (471)
+++++|.+ +.+|..+. ++|++|+|++|++++..|..++++++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 17 l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 17 VNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 34444444 24444432 4555555555555554455555555555555555555543333344555555555555555
Q ss_pred CCCCcccccCCCCCCEEeCCCCccc
Q 042931 217 SGPLPQEIGNLKNLMELDLGTNSLI 241 (471)
Q Consensus 217 ~g~~p~~l~~l~~L~~L~Ls~N~l~ 241 (471)
++..+..+.++++|++|+|++|.+.
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ceeCHHHhccccCCCEEEeCCCCcc
Confidence 4333333444444444444444443
No 150
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=1.1e-13 Score=123.83 Aligned_cols=104 Identities=24% Similarity=0.318 Sum_probs=61.7
Q ss_pred CEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCC
Q 042931 159 QRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTN 238 (471)
Q Consensus 159 ~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N 238 (471)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56677777664 4665553 56666666666666665666666666666666666666443334455666666666666
Q ss_pred ccccccccccCCCCCCCEEECCCCcCC
Q 042931 239 SLIGPIPSTLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 239 ~l~g~ip~~l~~l~~L~~L~L~~N~l~ 265 (471)
++++..+..|..+++|++|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 655433334555555555555555554
No 151
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.49 E-value=4.2e-14 Score=137.70 Aligned_cols=121 Identities=31% Similarity=0.550 Sum_probs=102.5
Q ss_pred cchhhhhhhcccccccc------eeecCCccccEEEEEeCCCcEEEEEEccccch-HHHHHHHHHHHHHHHHhccCCCCc
Q 042931 349 RIVYEDLIRATEDFDIR------YCIGTGGYGSVYKAQLPNGKVFALKKLHTSET-EELAFIKSFRNEAQVLSQVLHRNI 421 (471)
Q Consensus 349 ~~~~~dL~~at~~f~~~------~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~~~~e~~~l~~l~H~ni 421 (471)
.|++.++..++.+|+.. +.||+|+||.||+|.. +++.||||++..... ......+.+.+|++++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 57888999999999887 8999999999999986 688999999975321 112235678899999999999999
Q ss_pred ccEEEEEEeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 422 VKLYGFCLHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 422 v~l~g~~~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+++++++.+.+..++||||+++|+|.+++.......+++|..+.+|+.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~ 141 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG 141 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHH
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999986555567899988887654
No 152
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.49 E-value=2.4e-14 Score=140.80 Aligned_cols=120 Identities=33% Similarity=0.653 Sum_probs=102.0
Q ss_pred cchhhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 349 RIVYEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 349 ~~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
.+++.++....++|...+.||+|+||.||+|...+|+.||||++....... ....+.+|++++++++|||||+++++|
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEEEE
Confidence 578889999999999999999999999999988789999999997643221 123688999999999999999999999
Q ss_pred EeCCeeeEEEeccCCCChhhhhhcCC-CCccCCHHHHHHHHhc
Q 042931 429 LHRKCMFLIYEYMEGGSLFCNLHNNE-EAVELDWAKRVNIVKA 470 (471)
Q Consensus 429 ~~~~~~~lV~ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia~g 470 (471)
...+..++||||+++|+|.++++... ...+++|..+.+|+.+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 139 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHH
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999754 3456899988887753
No 153
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.47 E-value=7e-14 Score=136.89 Aligned_cols=119 Identities=25% Similarity=0.405 Sum_probs=95.4
Q ss_pred chhhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEE
Q 042931 350 IVYEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL 429 (471)
Q Consensus 350 ~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 429 (471)
+...+..-...+|.+.+.||+|+||.||+|.. +|+.||||++....... ...++|.+|++++++++|||||++++++.
T Consensus 27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 104 (309)
T 3p86_A 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIVLFMGAVT 104 (309)
T ss_dssp -----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 33344444456889999999999999999986 68899999997654332 33467889999999999999999999999
Q ss_pred eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 430 HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 430 ~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..+..++||||+++|+|.++++.......+++..+.+|+.+
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~q 145 (309)
T 3p86_A 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145 (309)
T ss_dssp STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHH
T ss_pred ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999997654456888888776643
No 154
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.47 E-value=1.1e-13 Score=146.96 Aligned_cols=92 Identities=30% Similarity=0.495 Sum_probs=81.5
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+++|++++|||||++++++.+.+..+|||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~---~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh---hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 5789999999999999999986 57999999999765432 2457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC
Q 042931 439 EYMEGGSLFCNLHNNE 454 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~ 454 (471)
|||++|+|++++....
T Consensus 234 E~~~gg~L~~~i~~~~ 249 (573)
T 3uto_A 234 EFMSGGELFEKVADEH 249 (573)
T ss_dssp ECCCCCBHHHHHTCTT
T ss_pred eecCCCcHHHHHHHhC
Confidence 9999999999997543
No 155
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.46 E-value=3.4e-13 Score=131.56 Aligned_cols=107 Identities=25% Similarity=0.462 Sum_probs=91.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .++..||+|++..... ...+.|.+|++++.+++|||||++++++.+.+..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 35788889999999999999986 5699999999865432 3356788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+++|+|.++++... ..++|..+.+|+.+
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~q 116 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKD 116 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHH
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHH
Confidence 99999999999998643 35788888877653
No 156
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.4e-13 Score=139.43 Aligned_cols=104 Identities=23% Similarity=0.384 Sum_probs=83.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC------C
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR------K 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------~ 432 (471)
++|.+.+.||+|+||+||+|.. .+|+.||||+++..... ....+.+.+|+++|++++|||||++++++... +
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 4699999999999999999986 67999999999764332 23346788999999999999999999988643 5
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
..|||||||+ |+|+++++..+ ++++.....|+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~ 164 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFL 164 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHH
T ss_pred EEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHH
Confidence 6899999996 78999998643 35555444433
No 157
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.45 E-value=2.2e-13 Score=133.74 Aligned_cols=108 Identities=19% Similarity=0.352 Sum_probs=87.9
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK------ 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------ 432 (471)
++|...+.||+|+||.||+|... +|+.||||+++..... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT--THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 57888999999999999999874 7999999999754322 23467889999999999999999999987643
Q ss_pred ---------------------------------------------------eeeEEEeccCCCChhhhhhcCCCCccCCH
Q 042931 433 ---------------------------------------------------CMFLIYEYMEGGSLFCNLHNNEEAVELDW 461 (471)
Q Consensus 433 ---------------------------------------------------~~~lV~ey~~~GsL~~~L~~~~~~~~l~w 461 (471)
..++||||+++|+|.++++.........|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 27999999999999999998766666677
Q ss_pred HHHHHHHh
Q 042931 462 AKRVNIVK 469 (471)
Q Consensus 462 ~~rl~ia~ 469 (471)
....+|+.
T Consensus 164 ~~~~~i~~ 171 (332)
T 3qd2_B 164 GVCLHIFI 171 (332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665554
No 158
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.44 E-value=2.6e-13 Score=133.53 Aligned_cols=115 Identities=22% Similarity=0.310 Sum_probs=93.7
Q ss_pred cchhhhhhhcccc----------cccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC
Q 042931 349 RIVYEDLIRATED----------FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL 417 (471)
Q Consensus 349 ~~~~~dL~~at~~----------f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~ 417 (471)
.++++++..+++. |...+.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQ 100 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhCC
Confidence 4666666655543 666779999999999999874 7999999999754322 2356789999999999
Q ss_pred CCCcccEEEEEEeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 418 HRNIVKLYGFCLHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 418 H~niv~l~g~~~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||||++++++...+..++||||+++|+|.++++.. .++|..+.+|+.+
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~q 149 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEA 149 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHH
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHH
Confidence 999999999999999999999999999999998753 3788888777653
No 159
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.44 E-value=2e-13 Score=137.25 Aligned_cols=107 Identities=27% Similarity=0.443 Sum_probs=89.8
Q ss_pred cccccceeecCCccccEEEEEeC----CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
.+|.+.+.||+|+||.||+|... ++..||||+++.... ....+.|.+|++++++++|||||+++++|.+.+..+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 57888999999999999999753 477899999976532 233567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+||||+++|+|.++++... ..++|..+.+|+.+
T Consensus 123 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~q 155 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRG 155 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHH
Confidence 9999999999999998643 35788888877654
No 160
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.43 E-value=1.3e-13 Score=141.62 Aligned_cols=117 Identities=28% Similarity=0.334 Sum_probs=93.4
Q ss_pred chhhhhhhcccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 350 IVYEDLIRATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 350 ~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
+.+.++....++|...+.||+|+||+||+|... +++.||+|+++..........+.+.+|..++.+++|||||+++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345666777889999999999999999999874 5889999999764332222233478899999999999999999999
Q ss_pred EeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 429 LHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 429 ~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
.+.+..++|||||++|+|.++++...+ .+++.....++
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~ 181 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYL 181 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHH
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHH
Confidence 999999999999999999999986432 35555444433
No 161
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.42 E-value=4.2e-13 Score=128.09 Aligned_cols=104 Identities=25% Similarity=0.426 Sum_probs=89.0
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
++|...+.||+|+||.||+|...++..||+|++...... .+++.+|++++.+++||||+++++++.+.+..++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 578888999999999999999888889999999865433 2568899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++|+|.++++.... .+++..+.+|+.
T Consensus 86 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ 113 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRG--LFAAETLLGMCL 113 (269)
T ss_dssp CCTTCBHHHHHHTTTT--CCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhcCc--ccCHHHHHHHHH
Confidence 9999999999986432 467777766654
No 162
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.42 E-value=1.8e-13 Score=145.70 Aligned_cols=97 Identities=25% Similarity=0.351 Sum_probs=79.6
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
..++|.+.+.||+|+||+||+|.. .+|+.||||+++....... ........++.+++.++|||||+++++|.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 347899999999999999999986 5699999999976443221 122233345677888999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcCC
Q 042931 434 MFLIYEYMEGGSLFCNLHNNE 454 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~ 454 (471)
.|||||||+||+|+++|++..
T Consensus 267 lylVmEy~~GGdL~~~l~~~~ 287 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHG 287 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHC
T ss_pred EEEEEecCCCCcHHHHHHhcC
Confidence 999999999999999998643
No 163
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.42 E-value=2.7e-15 Score=159.62 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=107.4
Q ss_pred cCCCCCCCEEEcCCCCCCccCc-hhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcc-----------cCCCCCC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIP-PEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNIS-----------KNILTGT 195 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip-~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~-----------~N~l~g~ 195 (471)
+..+++|++|++++|.+++... ..+..+++|++|+++++...+.++....++++|++|+++ .|.+++.
T Consensus 289 ~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 289 FPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred HhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 4556788999998888765443 335777888888887332222333334556777777777 2444432
Q ss_pred -CCCccCCCCCcCEEEccCCCCCCCCcccccC-CCCCCEEeCC----CCccccc-----cccccCCCCCCCEEECCCC--
Q 042931 196 -VPSTLGSLTNLKNMGLSYNQLSGPLPQEIGN-LKNLMELDLG----TNSLIGP-----IPSTLGRLTNLNYMSLSRN-- 262 (471)
Q Consensus 196 -~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~-l~~L~~L~Ls----~N~l~g~-----ip~~l~~l~~L~~L~L~~N-- 262 (471)
++.....+++|++|+++.|.+++..+..++. +++|++|+++ .|.+++. ++..+.++++|+.|+++.|
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 2222344667777777666666655555544 6667777664 5555542 3334555666666666532
Q ss_pred cCCCCCccccc-CCCCCCEEeccCCcCcC-CCchhhhcCCCCCcccCCCCcCcc
Q 042931 263 MFGGLLPQEIG-NLKNLIELNVGSNSLIG-PIPSTLGLLTDLSYLDLSCNQFSS 314 (471)
Q Consensus 263 ~l~g~~p~~l~-~l~~L~~L~L~~N~l~g-~ip~~l~~l~~L~~L~l~~N~l~g 314 (471)
.+++..+..++ .+++|++|++++|++++ .++..+..+++|+.|++++|++++
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred CccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 24433333333 25566666666666554 233444556666666666666543
No 164
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.41 E-value=2e-13 Score=139.10 Aligned_cols=116 Identities=23% Similarity=0.346 Sum_probs=93.6
Q ss_pred chhhhhhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 350 IVYEDLIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 350 ~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
+.+++.....++|...+.||+|+||+||++.. .+|+.||+|+++..........+.+.+|.+++.+++|||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 44566667788999999999999999999987 57999999999764433222334578899999999999999999999
Q ss_pred EeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHH
Q 042931 429 LHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNI 467 (471)
Q Consensus 429 ~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~i 467 (471)
.+.+..++||||+++|+|.+++++.+. .+++.....+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~ 167 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFY 167 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHH
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHH
Confidence 999999999999999999999986432 3455544443
No 165
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.41 E-value=4.9e-13 Score=129.71 Aligned_cols=107 Identities=27% Similarity=0.408 Sum_probs=90.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|.+.+.||+|+||.||++.. .++..||+|++...........+.|.+|+.++.+++|||||++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4688889999999999999985 568999999996544333445678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... ++++..+.+++.
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~ 118 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTN 118 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHH
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999998643 467777776654
No 166
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.41 E-value=6.1e-13 Score=131.04 Aligned_cols=107 Identities=27% Similarity=0.398 Sum_probs=89.0
Q ss_pred cccccceeecCCccccEEEEEeC----CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
..|.+.+.||+|+||.||+|... .+..||||+++.... ....+.|.+|++++++++|||||++++++.+.+..+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 56888899999999999999863 345699999976432 223467899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+||||+++|+|.++++... ..+++..+.+|+.+
T Consensus 127 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~q 159 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRG 159 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHH
T ss_pred EEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHH
Confidence 9999999999999998643 24778877776653
No 167
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.40 E-value=7.3e-13 Score=133.00 Aligned_cols=110 Identities=21% Similarity=0.368 Sum_probs=90.0
Q ss_pred ccccccceeecCCccccEEEEEe--------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL--------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCL 429 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 429 (471)
.++|.+.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|++++.++ +|||||+++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB--HHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC--HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 35788889999999999999974 2356799999976532 23356788999999999 8999999999999
Q ss_pred eCCeeeEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHhc
Q 042931 430 HRKCMFLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 430 ~~~~~~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~g 470 (471)
+.+..++||||+++|+|.++++.... ...++|..+++|+.+
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 211 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 211 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHH
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHH
Confidence 99999999999999999999986432 234788877776643
No 168
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.40 E-value=1.2e-13 Score=140.76 Aligned_cols=102 Identities=25% Similarity=0.402 Sum_probs=85.9
Q ss_pred hhhhhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe
Q 042931 352 YEDLIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 430 (471)
Q Consensus 352 ~~dL~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 430 (471)
..++....++|...+.||+|+||+||+|.. .++..||+|+++..........+.+.+|..+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 355666778999999999999999999986 4689999999975432222222357789999999999999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhcC
Q 042931 431 RKCMFLIYEYMEGGSLFCNLHNN 453 (471)
Q Consensus 431 ~~~~~lV~ey~~~GsL~~~L~~~ 453 (471)
.+..++||||+++|+|.+++++.
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~ 163 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY 163 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC
Confidence 99999999999999999999864
No 169
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.40 E-value=4.7e-13 Score=127.39 Aligned_cols=108 Identities=20% Similarity=0.317 Sum_probs=90.2
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC--CeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lV 437 (471)
++|...+.||+|+||.||+|.. +++.||||++....... ...+.|.+|++++++++|||||++++++.+. +..++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWST-RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCH-HHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCH-HHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 5788889999999999999997 48899999997654222 3346789999999999999999999999886 778999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+++|+|.++++... ...+++..+.+|+.+
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~q 119 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT-NFVVDQSQAVKFALD 119 (271)
T ss_dssp EECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHH
T ss_pred ecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHH
Confidence 99999999999999643 335788888877653
No 170
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.39 E-value=8e-13 Score=130.58 Aligned_cols=113 Identities=28% Similarity=0.433 Sum_probs=93.1
Q ss_pred hhcccccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEE
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL 429 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 429 (471)
....++|...+.||+|+||.||+|... +++.||||+++.... ....+.|.+|++++++++||||++++++|.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 345578899999999999999999863 347899999976542 233567899999999999999999999999
Q ss_pred eCCeeeEEEeccCCCChhhhhhcCCC---------------------CccCCHHHHHHHHhc
Q 042931 430 HRKCMFLIYEYMEGGSLFCNLHNNEE---------------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 430 ~~~~~~lV~ey~~~GsL~~~L~~~~~---------------------~~~l~w~~rl~ia~g 470 (471)
..+..++||||+++|+|.++++.... ..++++..+++|+.+
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 182 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHH
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999986421 246888888877654
No 171
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.39 E-value=8e-13 Score=130.53 Aligned_cols=107 Identities=22% Similarity=0.379 Sum_probs=88.3
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
....+|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++|||||++++++...+..+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 3456899999999999999999986 67999999999765432 233467889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHH
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNI 467 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~i 467 (471)
+||||+++|+|.+++...+. ++.....++
T Consensus 91 lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~ 119 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGR---MKEKEARSK 119 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCC---CCHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHcCC---CCHHHHHHH
Confidence 99999999999999986432 444444443
No 172
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.39 E-value=9.8e-13 Score=127.29 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=81.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|.+.+.||+|+||.||+|.. .+|+.||||++...........+.|.+|++++.+++|||||++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 4688889999999999999987 458999999998654433344578889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhc
Q 042931 439 EYMEGGSLFCNLHN 452 (471)
Q Consensus 439 ey~~~GsL~~~L~~ 452 (471)
||+++|+|.+++++
T Consensus 111 e~~~g~~L~~~l~~ 124 (286)
T 3uqc_A 111 EWIRGGSLQEVADT 124 (286)
T ss_dssp ECCCEEEHHHHHTT
T ss_pred EecCCCCHHHHHhc
Confidence 99999999999964
No 173
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.39 E-value=8.3e-13 Score=129.44 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=89.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC--eeeE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK--CMFL 436 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~l 436 (471)
..|.+.+.||+|+||.||+|.. .+|+.||||++....... ..+.+.+|++++++++|||||++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 4688889999999999999986 459999999997644222 2356778999999999999999999998755 6799
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+++|+|.++++.......+++..+.+|+.+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~q 120 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHH
Confidence 9999999999999997554445788887776653
No 174
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.38 E-value=4.2e-14 Score=150.35 Aligned_cols=188 Identities=12% Similarity=0.087 Sum_probs=104.2
Q ss_pred CCCCCCEEEcCCCCCCcc----CchhccCCCCCCEEeccCCCCC----CcCCcccCCCCCCcEEEcccCCCCCCCCCccC
Q 042931 130 CFPNLENLTFQSFPLAGS----IPPEISALSKLQRLDLSSNRLT----GSIPSEIGNLRNLVYLNISKNILTGTVPSTLG 201 (471)
Q Consensus 130 ~l~~L~~L~L~~n~l~g~----ip~~l~~L~~L~~L~Ls~N~l~----g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~ 201 (471)
.+++|++|+|++|.+++. ++..+..+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 567888888888877655 4445567788888888888876 2344455677888888888887764 555666
Q ss_pred CCCCcCEEEccCCCC--------------------------CCCCcccccCCCCCCEEeCCCCccccccc-cccCCCCCC
Q 042931 202 SLTNLKNMGLSYNQL--------------------------SGPLPQEIGNLKNLMELDLGTNSLIGPIP-STLGRLTNL 254 (471)
Q Consensus 202 ~l~~L~~L~L~~N~l--------------------------~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L 254 (471)
++++|+.|+++.+.. .+.+|..+..+++|++|++++|.+++... ..+..+++|
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 666666666654221 12334444444555555555555433222 223445555
Q ss_pred CEEECCCCcCCCCCcccccCCCCCCEEecc-----------CCcCcCC-CchhhhcCCCCCcccCCCCcCcccccc
Q 042931 255 NYMSLSRNMFGGLLPQEIGNLKNLIELNVG-----------SNSLIGP-IPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 255 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~-----------~N~l~g~-ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
+.|+++++...+.++.....+++|++|+++ .|.+++. ++.....+++|++|+++.|.+++..+.
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 555555221111222222345555666665 2333322 122233456666666666666554443
No 175
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.38 E-value=1.1e-12 Score=129.37 Aligned_cols=164 Identities=17% Similarity=0.163 Sum_probs=104.4
Q ss_pred CCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCC----C-------------
Q 042931 155 LSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQL----S------------- 217 (471)
Q Consensus 155 L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l----~------------- 217 (471)
+++|+.|+|++ .++..-+..|.++++|+.+++++|.+....+..|.++.++..+.+..+.. .
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 67777777776 56543344566777777777777766544455566665555555443110 0
Q ss_pred ---------CCCcccc----------------------------cCCCCCCEEeCCCCccccccccccCCCCCCCEEECC
Q 042931 218 ---------GPLPQEI----------------------------GNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLS 260 (471)
Q Consensus 218 ---------g~~p~~l----------------------------~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~ 260 (471)
+.+|..+ ..+++|+.+++++|+++..-+..|.++++|+.+++.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0000000 026788888888888775555578888888888888
Q ss_pred CCcCCCCCcccccCCCCCC-EEeccCCcCcCCCchhhhcCCCCCcccCCCCcCccccccccc
Q 042931 261 RNMFGGLLPQEIGNLKNLI-ELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQFSSSIPNDTT 321 (471)
Q Consensus 261 ~N~l~g~~p~~l~~l~~L~-~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 321 (471)
+| ++..-+..|.++.+|+ .+++.+ .++..-+..|..+++|+.++++.|+++..-+..+.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 77 6655566778888888 888877 56655567788888888888888877643333343
No 176
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.38 E-value=4e-13 Score=135.19 Aligned_cols=107 Identities=26% Similarity=0.502 Sum_probs=89.8
Q ss_pred ccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|... +++.||||+++.... ....++|.+|++++++++|||||+++++|...+..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC--HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 457888899999999999999874 789999999975432 22345788999999999999999999999998999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.++++... ..+++..+.+++.
T Consensus 191 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~ 220 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG--ARLRVKTLLQMVG 220 (377)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHH
Confidence 99999999999998532 3467777776654
No 177
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.38 E-value=7.5e-13 Score=130.18 Aligned_cols=107 Identities=28% Similarity=0.472 Sum_probs=87.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||++.. .+|+.||+|+++..........+.+.+|..+++.++|||||++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35788999999999999999986 57999999999764332222345677899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|||+++|+|.++++... .+++.....++
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~ 112 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYA 112 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHH
Confidence 99999999999998643 24555444433
No 178
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.38 E-value=9.3e-13 Score=126.57 Aligned_cols=106 Identities=25% Similarity=0.456 Sum_probs=87.3
Q ss_pred cccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
..++|...+.||+|+||.||++...++..||+|++...... .+++.+|++++.+++||||+++++++.+.+..++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 34578888999999999999999888889999999865433 25688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.++++... ..+++..+.+|+.
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 127 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR--HRFQTQQLLEMCK 127 (283)
T ss_dssp ECCCTTCBHHHHHHCGG--GCCCHHHHHHHHH
T ss_pred EeccCCCcHHHHHHHhc--cCCCHHHHHHHHH
Confidence 99999999999998632 2467777777654
No 179
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.37 E-value=6e-13 Score=138.94 Aligned_cols=108 Identities=26% Similarity=0.463 Sum_probs=90.8
Q ss_pred cccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
...+|.+.+.||+|+||.||+|... .+..||||+++..... .++|.+|++++++++|||||+++++|...+..+|
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 3457888899999999999999875 4889999999765432 3578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||||++|+|.++++... ...+++..+++|+.+
T Consensus 294 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~q 326 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQ 326 (495)
T ss_dssp EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHH
T ss_pred EEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHH
Confidence 999999999999998642 245788877766543
No 180
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.37 E-value=1.9e-12 Score=127.31 Aligned_cols=105 Identities=23% Similarity=0.327 Sum_probs=87.8
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.+.|.+.+.||+|+||.||+|.. .++..+|+|.+..... ..+.+.+|++++.+++|||||++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc----cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 35788899999999999999986 4688999999975432 235678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... ..+++....+++.
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~ 109 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVH 109 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHH
Confidence 99999999999998643 2466666666554
No 181
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.37 E-value=7.3e-13 Score=131.37 Aligned_cols=106 Identities=22% Similarity=0.311 Sum_probs=86.2
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||+||++.. .+|+.||+|+++..........+.+.+|++++.+++|||||++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 35788999999999999999986 46999999999764322222345678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNI 467 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~i 467 (471)
|||+++|+|.+++...+ .++......+
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~ 110 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFY 110 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHH
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHH
Confidence 99999999999998543 2444444443
No 182
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.37 E-value=8.4e-13 Score=125.80 Aligned_cols=106 Identities=22% Similarity=0.405 Sum_probs=90.2
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.++|...+.||+|+||.||+|...++..||+|++...... .+++.+|++++.+++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 4578889999999999999999888889999999765433 246788999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||+++|+|.++++... ..+++..+.+|+.+
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~q 112 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYD 112 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHH
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHH
Confidence 9999999999998642 34677777776643
No 183
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.37 E-value=1.2e-12 Score=130.91 Aligned_cols=91 Identities=23% Similarity=0.267 Sum_probs=77.7
Q ss_pred hcccccccceeecCCccccEEEEEe----CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeC
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHR 431 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 431 (471)
.-.+.|.+.+.||+|+||+||+|.. ..++.||+|++..... ..++.+|++++.++ +|||||++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 3456799999999999999999964 2467899999976542 23567899999988 699999999999999
Q ss_pred CeeeEEEeccCCCChhhhhhc
Q 042931 432 KCMFLIYEYMEGGSLFCNLHN 452 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~ 452 (471)
+..+||||||++|+|.++++.
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~~ 113 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILNS 113 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHTT
T ss_pred CEEEEEEeCCCcccHHHHHcC
Confidence 999999999999999999963
No 184
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.37 E-value=1.1e-12 Score=129.00 Aligned_cols=104 Identities=24% Similarity=0.333 Sum_probs=85.8
Q ss_pred cccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC----e
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK----C 433 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~ 433 (471)
..++|.+.+.||+|+||.||+|... ++.||||++...... ...+.+|+.++++++|||||++++++.... .
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ----SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH----HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 3468899999999999999999874 789999999754322 244567899999999999999999998744 3
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
.++||||+++|+|.++++.. .++|..+.+|+.+
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~q 129 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAET 129 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHH
Confidence 69999999999999999864 3788888777653
No 185
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.37 E-value=9.9e-13 Score=132.73 Aligned_cols=106 Identities=23% Similarity=0.371 Sum_probs=87.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||++.. .+++.||+|++...........+.+.+|++++.+++|||||+++++|.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5788899999999999999986 568999999997644332233467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||+++|+|.++++... .+++.....++
T Consensus 95 e~~~gg~L~~~l~~~~---~l~~~~~~~~~ 121 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---HFKEETVKLFI 121 (384)
T ss_dssp CCCTTEEHHHHHHTTC---CCCHHHHHHHH
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHH
Confidence 9999999999998643 35565555444
No 186
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.37 E-value=1e-12 Score=125.88 Aligned_cols=110 Identities=21% Similarity=0.411 Sum_probs=91.2
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
..++|...+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346789999999999999999986 5799999999975433222234678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++.... .++++..+.+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 119 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMH 119 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHH
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHH
Confidence 999999999999998642 3567777776654
No 187
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.36 E-value=8.6e-13 Score=131.38 Aligned_cols=107 Identities=22% Similarity=0.409 Sum_probs=88.0
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
-.+.|.+.+.||+|+||.||+|.. .+|+.||||++....... ..+.+.+|++++++++|||||++++++...+..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 346789999999999999999985 679999999997654322 23567899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++.... .+++....+|+.
T Consensus 86 v~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~ 115 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQD---RLSEEETRVVFR 115 (347)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHH
Confidence 999999999999997543 356666655543
No 188
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.36 E-value=1.3e-12 Score=129.94 Aligned_cols=107 Identities=23% Similarity=0.390 Sum_probs=87.8
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
..+|...+.||+|+||.||++.. .+++.||+|+++..........+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 35788999999999999999986 46899999999765433334456788899999887 89999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||||+++|+|.++++... .+++.....++
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~ 116 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYS 116 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 999999999999998543 35555555443
No 189
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.36 E-value=9.3e-13 Score=126.36 Aligned_cols=109 Identities=29% Similarity=0.525 Sum_probs=90.1
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
+.++|.+.+.||+|+||.||+|.. .++..||+|++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 556899999999999999999986 5688999999976543333334678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++.... .+++..+.+|+.
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~ 116 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYIT 116 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999999999998543 356666665543
No 190
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.36 E-value=1e-12 Score=130.80 Aligned_cols=99 Identities=22% Similarity=0.378 Sum_probs=81.8
Q ss_pred hhhhcccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEE
Q 042931 354 DLIRATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYG 426 (471)
Q Consensus 354 dL~~at~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g 426 (471)
+.....++|.+.+.||+|+||.||+|.. .+++.||||+++..... ...+.+.+|++++.++ +|||||++++
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH--HHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 3344567899999999999999999963 34689999999765432 2346788999999999 7899999999
Q ss_pred EEEeCC-eeeEEEeccCCCChhhhhhcCC
Q 042931 427 FCLHRK-CMFLIYEYMEGGSLFCNLHNNE 454 (471)
Q Consensus 427 ~~~~~~-~~~lV~ey~~~GsL~~~L~~~~ 454 (471)
+|.+.+ ..++||||+++|+|.++++...
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~ 122 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence 998755 4899999999999999998653
No 191
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.9e-12 Score=128.51 Aligned_cols=92 Identities=24% Similarity=0.269 Sum_probs=51.2
Q ss_pred CchhccCCCCCCEEeccC-CCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccC
Q 042931 148 IPPEISALSKLQRLDLSS-NRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGN 226 (471)
Q Consensus 148 ip~~l~~L~~L~~L~Ls~-N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~ 226 (471)
||. +..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..+..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 455 55555666666654 5555544455556666666666666665555555556666666666666655433333333
Q ss_pred CCCCCEEeCCCCccc
Q 042931 227 LKNLMELDLGTNSLI 241 (471)
Q Consensus 227 l~~L~~L~Ls~N~l~ 241 (471)
++ |+.|+|++|.+.
T Consensus 103 ~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 103 LS-LQELVLSGNPLH 116 (347)
T ss_dssp CC-CCEEECCSSCCC
T ss_pred CC-ceEEEeeCCCcc
Confidence 33 556666655554
No 192
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=130.15 Aligned_cols=103 Identities=25% Similarity=0.413 Sum_probs=80.9
Q ss_pred cccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEec
Q 042931 362 FDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEY 440 (471)
Q Consensus 362 f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ey 440 (471)
+...+.||+|+||.||+|.. .+|..||+|+++..... ..+.+.+|++++.+++|||||++++++.+.+..++||||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 33457899999999999986 57999999999865432 246788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 441 MEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 441 ~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+++|+|.+++.... ..+++..+..|+.
T Consensus 168 ~~~~~L~~~l~~~~--~~l~~~~~~~i~~ 194 (373)
T 2x4f_A 168 VDGGELFDRIIDES--YNLTELDTILFMK 194 (373)
T ss_dssp CTTCEEHHHHHHTG--GGCCHHHHHHHHH
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHH
Confidence 99999999998532 3467777776554
No 193
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=131.00 Aligned_cols=109 Identities=26% Similarity=0.401 Sum_probs=89.8
Q ss_pred cccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
++|.+.+.||+|+||.||+|... ++..||||++...... .....+.+|+.++++++|||||++++++...+.
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccCh--hhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 56888899999999999999842 4678999999754322 234578899999999999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcCC----CCccCCHHHHHHHHhc
Q 042931 434 MFLIYEYMEGGSLFCNLHNNE----EAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~----~~~~l~w~~rl~ia~g 470 (471)
.++||||+++|+|.++++... ....++|..+++|+.+
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~q 189 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHH
Confidence 999999999999999998643 2245788888877653
No 194
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.36 E-value=1.9e-12 Score=125.74 Aligned_cols=104 Identities=22% Similarity=0.345 Sum_probs=86.6
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
...|...+.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++|||||++++++...+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 35788899999999999999985 679999999996543222 35678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++++.. +++....+++.
T Consensus 96 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ 123 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETC----MDEGQIAAVCR 123 (297)
T ss_dssp EECCTTCBHHHHHHHSC----CCHHHHHHHHH
T ss_pred EECCCCCCHHHHHhhcC----CCHHHHHHHHH
Confidence 99999999999998642 55655555543
No 195
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.36 E-value=1.1e-12 Score=130.75 Aligned_cols=107 Identities=24% Similarity=0.369 Sum_probs=88.1
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||++.. .+|..||+|+++..........+.+.+|++++.+++|||||++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 36789999999999999999986 46999999999765433223346788899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|||+++|+|.++++... .++......++
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~ 147 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYA 147 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHH
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 99999999999998643 25555555444
No 196
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.35 E-value=1.2e-12 Score=128.74 Aligned_cols=105 Identities=24% Similarity=0.389 Sum_probs=85.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 5788999999999999999986 47999999999754322 22356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.++++... .+++..+.+|+.
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 112 (323)
T 3tki_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFH 112 (323)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHH
T ss_pred EcCCCCcHHHHHhhcC---CCCHHHHHHHHH
Confidence 9999999999998543 367776666654
No 197
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.35 E-value=1.2e-12 Score=130.98 Aligned_cols=108 Identities=28% Similarity=0.411 Sum_probs=88.3
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
.+.|.+.+.||+|+||.||+|.. .+|..||+|+++....... ...+.+.+|+.++.+++|||||++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 35688899999999999999986 5699999999976432211 1235688999999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||+++|+|.+++.... .+++.....++.
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~ 122 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIK 122 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 99999999999999998543 466666665543
No 198
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.35 E-value=1.4e-12 Score=125.54 Aligned_cols=109 Identities=26% Similarity=0.446 Sum_probs=91.4
Q ss_pred hhcccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
.-..++|.+.+.||+|+||.||+|... ++..||+|++...... .+.+.+|++++++++||||+++++++.+.+..
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHH----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 345568899999999999999999874 5889999999765432 36788999999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||+++|+|.++++... ...+++..+.+|+.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ 118 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMAT 118 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHH
Confidence 99999999999999998642 34577877776654
No 199
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.35 E-value=2.1e-12 Score=129.35 Aligned_cols=107 Identities=21% Similarity=0.409 Sum_probs=88.9
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .+|..||+|++....... ...+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788999999999999999986 568999999997654322 2346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... .+++....+++.
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~ 135 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQ 135 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHH
Confidence 99999999999998643 356666655543
No 200
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.35 E-value=1.7e-12 Score=123.48 Aligned_cols=104 Identities=25% Similarity=0.396 Sum_probs=88.8
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
++|...+.||+|+||.||++...++..||+|++...... .+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 578888999999999999999888889999999865432 2568889999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++|+|.++++... ..+++..+.+++.
T Consensus 84 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~ 111 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQR--GLFAAETLLGMCL 111 (267)
T ss_dssp CCTTCBHHHHHHHTT--TCCCHHHHHHHHH
T ss_pred CCCCCcHHHHHhhCc--ccCCHHHHHHHHH
Confidence 999999999998643 2466777666554
No 201
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=130.41 Aligned_cols=107 Identities=21% Similarity=0.405 Sum_probs=86.8
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++..........+.+.+|.+++..+ +|||||++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 45789999999999999999986 56899999999765433333445677899999988 69999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||||+++|+|.++++..+ .+++.....++
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~ 130 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYA 130 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 999999999999998643 35555554443
No 202
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.35 E-value=1e-12 Score=135.59 Aligned_cols=106 Identities=24% Similarity=0.436 Sum_probs=87.8
Q ss_pred cccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
..++|.+.+.||+|+||.||+|...++..||||+++..... .+.|.+|++++++++|||||++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc----HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 34578888999999999999999988889999999865432 367889999999999999999999986 6678999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||++|+|.++++... ...+++..+++++.
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~ 291 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSA 291 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHH
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHH
Confidence 99999999999998532 23456776666554
No 203
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.35 E-value=2.2e-12 Score=125.94 Aligned_cols=109 Identities=21% Similarity=0.348 Sum_probs=92.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 36788999999999999999986 46899999999765444444557889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+++|+|.++++... ++++..+.+|+.+
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~q 142 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQ 142 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHH
Confidence 99999999999998542 4677777766543
No 204
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.35 E-value=6.5e-13 Score=129.77 Aligned_cols=107 Identities=21% Similarity=0.350 Sum_probs=88.3
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe----e
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC----M 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----~ 434 (471)
+.|.+.+.||+|+||.||++.. .+++.||||++...........+.+.+|++++.+++|||||++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5688899999999999999985 6789999999976544344455678999999999999999999999977543 3
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||+++|+|.++++... ++++....+|+.
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~ 123 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIA 123 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHH
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 99999999999999998543 467776666654
No 205
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.35 E-value=2e-12 Score=125.03 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=90.4
Q ss_pred ccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.+.|...+.||+|+||.||++... +++.+|+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888899999999999999864 5889999999765333334456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+++|+|.+++.... .+++..+.+|+.+
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~q 123 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQ 123 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHH
Confidence 99999999999987532 4677777766543
No 206
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.34 E-value=1.6e-12 Score=128.11 Aligned_cols=107 Identities=23% Similarity=0.372 Sum_probs=88.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
+.|...+.||+|+||.||+|.. .+|..||+|++........ ...+.+.+|++++.+++|||||++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4688889999999999999986 4699999999975432211 12356889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.+++.... .+++..+.+|+.
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 121 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---SLTEEEATEFLK 121 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---CCBHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHH
Confidence 9999999999999998543 466776666654
No 207
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.34 E-value=2.7e-12 Score=125.13 Aligned_cols=111 Identities=21% Similarity=0.281 Sum_probs=89.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
..+|.+.+.||+|+||.||+|.. .+|..||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788999999999999999986 57999999999754332334456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCC-CCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNE-EAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... ....+++....+++.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 143 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHH
Confidence 99999999999998521 233466766666554
No 208
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.34 E-value=1.4e-12 Score=126.16 Aligned_cols=105 Identities=30% Similarity=0.502 Sum_probs=86.9
Q ss_pred cccccceeecCCccccEEEEEe-----CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC--C
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--K 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 432 (471)
+.|.+.+.||+|+||.||+|.+ .+++.||||++..... ...+.|.+|++++.+++|||||+++++|... .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH---HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 5788889999999999999974 3588999999986542 2346788999999999999999999999664 4
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 121 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 121 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHH
T ss_pred ceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHH
Confidence 5799999999999999998643 2477777776654
No 209
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.34 E-value=1.7e-12 Score=134.58 Aligned_cols=107 Identities=26% Similarity=0.433 Sum_probs=88.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||+|.. .+|+.||||+++..........+.+.+|+++++.++|||||++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5788889999999999999986 479999999997644322223457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+++.
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~ 123 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQ 123 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHH
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999998543 366666665543
No 210
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.34 E-value=2e-12 Score=125.91 Aligned_cols=111 Identities=26% Similarity=0.393 Sum_probs=90.5
Q ss_pred cccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 431 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 431 (471)
..++|.+.+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++++++|||||++++++.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC--HHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 346788899999999999999974 2457899999976432 23346788999999999999999999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCC---------------------CccCCHHHHHHHHhc
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEE---------------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~---------------------~~~l~w~~rl~ia~g 470 (471)
+..++||||+++|+|.++++.... ...+++..+.+|+.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 158 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHH
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHH
Confidence 999999999999999999986432 234777777776643
No 211
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=2.5e-12 Score=127.65 Aligned_cols=106 Identities=23% Similarity=0.193 Sum_probs=89.6
Q ss_pred CEEeccCC-CCCCcCCcccCCCCCCcEEEccc-CCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCC
Q 042931 159 QRLDLSSN-RLTGSIPSEIGNLRNLVYLNISK-NILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLG 236 (471)
Q Consensus 159 ~~L~Ls~N-~l~g~iP~~l~~L~~L~~L~L~~-N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls 236 (471)
..++++++ ++++ +|. ++.+++|++|+|++ |.+++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34688887 8874 888 99999999999996 99988777889999999999999999998888889999999999999
Q ss_pred CCccccccccccCCCCCCCEEECCCCcCCCC
Q 042931 237 TNSLIGPIPSTLGRLTNLNYMSLSRNMFGGL 267 (471)
Q Consensus 237 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ 267 (471)
+|+|++..|..+..++ |+.|+|.+|.+...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999875555565555 99999999988753
No 212
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.34 E-value=1.2e-12 Score=130.33 Aligned_cols=108 Identities=22% Similarity=0.418 Sum_probs=86.3
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeee
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 435 (471)
..++|...+.||+|+||.||+|.. .+|+.||+|+++..........+.+.+|.+++.++ +|||||++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 456899999999999999999987 46899999999764322222235567788888876 9999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
+||||+++|+|.++++... .+++.....++
T Consensus 95 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~ 124 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---KFDLSRATFYA 124 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 9999999999999998532 35665555544
No 213
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.34 E-value=3e-12 Score=129.13 Aligned_cols=111 Identities=15% Similarity=0.212 Sum_probs=91.8
Q ss_pred hcccccccceeecCC--ccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 357 RATEDFDIRYCIGTG--GYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 357 ~at~~f~~~~~lG~G--~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
...+.|.+.+.||+| +||.||+|.. .+|+.||||+++..... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 344679999999999 9999999986 47999999999765432 2345678899999999999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++|||||++|+|.+++.... ...+++....+|+.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ 135 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQ 135 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHH
T ss_pred EEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHH
Confidence 999999999999999998642 22367776666554
No 214
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.34 E-value=2.8e-12 Score=126.56 Aligned_cols=110 Identities=21% Similarity=0.372 Sum_probs=88.9
Q ss_pred ccccccceeecCCccccEEEEEeC--------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCL 429 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 429 (471)
.++|...+.||+|+||.||+|... ++..||||+++.... ....+.+.+|++++.++ +||||++++++|.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc--HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 357888999999999999999752 467899999976542 22346788999999999 8999999999999
Q ss_pred eCCeeeEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHhc
Q 042931 430 HRKCMFLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 430 ~~~~~~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~g 470 (471)
..+..++||||+++|+|.++++.... ...++|..+.+|+.+
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 165 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHH
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHH
Confidence 99999999999999999999996532 234788887776653
No 215
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.34 E-value=1.7e-12 Score=131.47 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=89.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC--eeeE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK--CMFL 436 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~l 436 (471)
..|.+.+.||+|+||.||+|.. .+|+.||||++....... ..+.+.+|++++++++|||||++++++...+ ..++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 4688889999999999999986 459999999997643222 2356778999999999999999999998755 6799
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+++|+|.++++.......+++..+.+|+.+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~q 120 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHH
Confidence 9999999999999997544444788877776643
No 216
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.33 E-value=1.3e-12 Score=132.41 Aligned_cols=107 Identities=22% Similarity=0.388 Sum_probs=85.5
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
..+|.+.+.||+|+||+||+++. .+++.||+|+++..........+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 35789999999999999999986 46889999999865433333345677888888877 89999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||||+++|+|.++++..+ .+++.....++
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~ 159 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYS 159 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 999999999999998643 35665555544
No 217
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.33 E-value=1.8e-12 Score=136.94 Aligned_cols=111 Identities=25% Similarity=0.331 Sum_probs=91.1
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
..++|...+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++.+++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 456799999999999999999986 5799999999976543322234567889999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.++++... ...+++..+..++.
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~ 293 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAA 293 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHH
Confidence 999999999999998643 23467776665543
No 218
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.33 E-value=4.8e-12 Score=127.88 Aligned_cols=105 Identities=25% Similarity=0.432 Sum_probs=88.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|.+.+.||+|+||.||+|.. .+|..+|+|++...... ....+.+|++++.+++|||||++++++.+.+..++||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh---hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999986 56899999999765432 2356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... ..+++....+++.
T Consensus 128 E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~ 156 (387)
T 1kob_A 128 EFLSGGELFDRIAAED--YKMSEAEVINYMR 156 (387)
T ss_dssp ECCCCCBHHHHTTCTT--CCBCHHHHHHHHH
T ss_pred EcCCCCcHHHHHHhhc--CCCCHHHHHHHHH
Confidence 9999999999998643 2466766666554
No 219
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.33 E-value=2e-12 Score=123.70 Aligned_cols=107 Identities=22% Similarity=0.409 Sum_probs=88.6
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||+|... +|+.||||++...........+.+.+|++++++++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999864 79999999997543322223457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+++.
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 118 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQ 118 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHH
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHH
Confidence 9999999999998543 356666666554
No 220
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.33 E-value=2.6e-12 Score=126.94 Aligned_cols=108 Identities=17% Similarity=0.226 Sum_probs=90.2
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.+.|...+.||+|+||.||++.. .++..+|+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 45788899999999999999986 45889999999765333334456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++++|.+++.... .+++..+.+|+.
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~ 148 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLR 148 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHH
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHH
Confidence 99999999999987532 467777776654
No 221
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.33 E-value=1.1e-12 Score=130.55 Aligned_cols=109 Identities=17% Similarity=0.330 Sum_probs=86.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH--HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL--AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
+.|.+.+.||+|+||.||+|.. .+|+.||||+++....... ...+.+.+|++++.+++|||||++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4688899999999999999986 5699999999964322110 123568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCC-CCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNE-EAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia 468 (471)
||||+++|+|.+++.... ....+++....+|+
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~ 136 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHH
Confidence 999999999998887532 22345666555544
No 222
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.33 E-value=2.3e-12 Score=125.53 Aligned_cols=110 Identities=25% Similarity=0.341 Sum_probs=90.6
Q ss_pred ccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHR 431 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 431 (471)
.++|...+.||+|+||.||+|.. .++..||||++...... ...+.+.+|++++.++ +||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH--HHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 35788889999999999999974 34679999999765432 2346788999999999 999999999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCC---------------CccCCHHHHHHHHhc
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEE---------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~---------------~~~l~w~~rl~ia~g 470 (471)
+..++||||+++|+|.++++.... ..++++..+.+++.+
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 153 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 153 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHH
Confidence 999999999999999999986532 225788888777653
No 223
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.33 E-value=1.1e-12 Score=128.55 Aligned_cols=116 Identities=21% Similarity=0.288 Sum_probs=93.5
Q ss_pred hhhhhhcccccccceeecCCccccEEEEEeC------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEE
Q 042931 352 YEDLIRATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLY 425 (471)
Q Consensus 352 ~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~ 425 (471)
.++.....+.|...+.||+|+||.||+|... .+..||+|++...... ...+.+.+|++++++++||||++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH--HHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH--HHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 3444556678999999999999999999753 3678999999765422 2345788999999999999999999
Q ss_pred EEEEeCCeeeEEEeccCCCChhhhhhcCC-------CCccCCHHHHHHHHh
Q 042931 426 GFCLHRKCMFLIYEYMEGGSLFCNLHNNE-------EAVELDWAKRVNIVK 469 (471)
Q Consensus 426 g~~~~~~~~~lV~ey~~~GsL~~~L~~~~-------~~~~l~w~~rl~ia~ 469 (471)
+++.+.+..++||||+++|+|.++++... ...++++..+.+|+.
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 145 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHH
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999998532 124567777777654
No 224
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.33 E-value=2.1e-12 Score=125.98 Aligned_cols=102 Identities=36% Similarity=0.551 Sum_probs=84.7
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
++|...+.||+|+||.||++.. .++.||||++.... ..+.|.+|++++++++|||||++++++. +..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESES-----ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSSTT-----HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecChh-----HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEE
Confidence 4688889999999999999987 47889999997543 2357889999999999999999999886 45799999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++|+|.++++.......+.+...++++.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 109 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 109 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHH
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHH
Confidence 999999999999765444567777766543
No 225
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.1e-14 Score=144.38 Aligned_cols=167 Identities=18% Similarity=0.157 Sum_probs=103.4
Q ss_pred CCCCCEEEcCCCCCCccCchhccC-----CCCCCEEeccCCCCCCcCCccc-CCCCCCcEEEcccCCCCCCCCCcc----
Q 042931 131 FPNLENLTFQSFPLAGSIPPEISA-----LSKLQRLDLSSNRLTGSIPSEI-GNLRNLVYLNISKNILTGTVPSTL---- 200 (471)
Q Consensus 131 l~~L~~L~L~~n~l~g~ip~~l~~-----L~~L~~L~Ls~N~l~g~iP~~l-~~L~~L~~L~L~~N~l~g~~p~~l---- 200 (471)
+++|+.|+|++|.++..-...+.. .++|++|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356788888888876543333322 2678888888887764322222 245677888888887764333333
Q ss_pred -CCCCCcCEEEccCCCCCC----CCcccccCCCCCCEEeCCCCcccc----ccccccCCCCCCCEEECCCCcCCCC----
Q 042931 201 -GSLTNLKNMGLSYNQLSG----PLPQEIGNLKNLMELDLGTNSLIG----PIPSTLGRLTNLNYMSLSRNMFGGL---- 267 (471)
Q Consensus 201 -~~l~~L~~L~L~~N~l~g----~~p~~l~~l~~L~~L~Ls~N~l~g----~ip~~l~~l~~L~~L~L~~N~l~g~---- 267 (471)
...++|++|+|++|.++. .++..+...++|++|+|++|.++. .++..+...++|+.|+|++|.++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 245677888888877753 234445667777788887777754 2345566667777777777777642
Q ss_pred CcccccCCCCCCEEeccCCcCcCCCchhhh
Q 042931 268 LPQEIGNLKNLIELNVGSNSLIGPIPSTLG 297 (471)
Q Consensus 268 ~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~ 297 (471)
++..+...++|++|+|++|.++..-...+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 233344556777777777776644333333
No 226
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.33 E-value=3.3e-12 Score=127.73 Aligned_cols=105 Identities=19% Similarity=0.309 Sum_probs=87.0
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
..+.|...+.||+|+||.||++.. .+++.||||++....... +.+.+|+.++++++|||||++++++...+..++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 345788999999999999999986 479999999997644322 457789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++.... .+++....+++.
T Consensus 94 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 123 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG---RFSEDEARFFFQ 123 (361)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999999999997533 356665555543
No 227
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=129.10 Aligned_cols=109 Identities=23% Similarity=0.361 Sum_probs=90.1
Q ss_pred cccccceeecCCccccEEEEEe--------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL--------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLH 430 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 430 (471)
+.|.+.+.||+|+||.||+|.. ..+..||||++...... ...+++.+|++++.++ +|||||+++++|..
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCH--HHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 5788889999999999999974 22468999999765322 3346788999999999 99999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHhc
Q 042931 431 RKCMFLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVKA 470 (471)
Q Consensus 431 ~~~~~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~g 470 (471)
.+..++||||+++|+|.++++.... ...+++..+.+|+.+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 199 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHH
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHH
Confidence 9999999999999999999986432 245888888887654
No 228
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.33 E-value=1.3e-12 Score=134.81 Aligned_cols=106 Identities=25% Similarity=0.436 Sum_probs=87.7
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.++|...+.||+|+||.||+|...++..||||+++..... .+.|.+|++++++++|||||++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 3567888999999999999999887888999999865432 3568899999999999999999999975 6789999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||+++|+|.++++... ...+++..+++|+.+
T Consensus 258 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~q 288 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQ 288 (452)
T ss_dssp CCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHH
T ss_pred hhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHH
Confidence 9999999999998531 234677777776643
No 229
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.32 E-value=2.9e-12 Score=127.60 Aligned_cols=108 Identities=25% Similarity=0.319 Sum_probs=88.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
..|...+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++++++++|||||+++++|...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999985 679999999997654333344567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||++ |++.+++.... .+++|..+.+|+.+
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~q 162 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHG 162 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHH
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHH
Confidence 9997 68888887432 35778777776543
No 230
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.32 E-value=2.8e-12 Score=126.85 Aligned_cols=111 Identities=24% Similarity=0.394 Sum_probs=88.2
Q ss_pred cccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEe
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLH 430 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 430 (471)
..++|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++.++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 446889999999999999999985 2356899999975432 22346788999999999 89999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhcCCCC--------------------ccCCHHHHHHHHhc
Q 042931 431 RKCMFLIYEYMEGGSLFCNLHNNEEA--------------------VELDWAKRVNIVKA 470 (471)
Q Consensus 431 ~~~~~lV~ey~~~GsL~~~L~~~~~~--------------------~~l~w~~rl~ia~g 470 (471)
.+..++||||+++|+|.++++..... ..++|..+.+|+.+
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 180 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHH
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHH
Confidence 99999999999999999999865321 34788888777653
No 231
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.32 E-value=3.3e-12 Score=131.70 Aligned_cols=106 Identities=26% Similarity=0.429 Sum_probs=87.5
Q ss_pred cccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC-eeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK-CMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~l 436 (471)
..++|...+.||+|+||.||+|... |+.||||+++.... .+.|.+|++++++++|||||+++++|...+ ..++
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT-----SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH-----HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3457888899999999999999874 78999999986541 357889999999999999999999988765 7899
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||||++|+|.++++... ...+++..+++++.+
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~q 297 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLD 297 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHH
Confidence 999999999999999642 234677777766543
No 232
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.32 E-value=2.8e-12 Score=127.69 Aligned_cols=104 Identities=27% Similarity=0.353 Sum_probs=82.0
Q ss_pred cccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
..+.|...+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++.+++|||||+++++|...+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3457889999999999999999874 58899999997543 13567789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++.... .+++....+|+.
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 155 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVK 155 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999999999998643 366766666554
No 233
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.32 E-value=2.1e-12 Score=123.77 Aligned_cols=111 Identities=22% Similarity=0.311 Sum_probs=90.3
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
.++|...+.||+|+||.||+|.. .+++.||+|++....... ...+++.+|+..+.++ +|||||++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 35788899999999999999987 479999999997643222 2245677899999988 99999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCC-CccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEE-AVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~-~~~l~w~~rl~ia~g 470 (471)
||||+++|+|.++++.... ...+++..+.+|+..
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~q 123 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHH
Confidence 9999999999999986421 234677777766543
No 234
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.32 E-value=4.5e-12 Score=122.29 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=85.6
Q ss_pred ccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 361 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
+|.....||+|+||.||+|.. .++..||||++..... ...+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 445556899999999999985 5689999999976532 224678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|+++|+|.++++.......+++..+..++
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYT 128 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHH
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHH
Confidence 99999999999976544556666665544
No 235
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.32 E-value=3.1e-12 Score=123.14 Aligned_cols=105 Identities=25% Similarity=0.425 Sum_probs=86.6
Q ss_pred cccccceeecCCccccEEEEEeC-CC-------cEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NG-------KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 431 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 431 (471)
++|...+.||+|+||.||+|... ++ ..||+|++...... ..+.+.+|++++++++|||||++++++.+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN---YSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG---GHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 57888899999999999999753 33 47999999764422 246788999999999999999999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+..++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 120 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAK 120 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHH
Confidence 99999999999999999998643 2366776666654
No 236
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.32 E-value=4.1e-12 Score=124.89 Aligned_cols=110 Identities=26% Similarity=0.411 Sum_probs=87.6
Q ss_pred ccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 432 (471)
.++|...+.||+|+||.||+|.. .++..||||++...... ...+++.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch--hhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 35788899999999999999974 34779999999754322 23457889999999999999999999999999
Q ss_pred eeeEEEeccCCCChhhhhhcCCC----CccCCHHHHHHHHhc
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEE----AVELDWAKRVNIVKA 470 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~----~~~l~w~~rl~ia~g 470 (471)
..++||||+++|+|.++++.... ...+++..+.+|+.+
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~q 148 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHH
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHH
Confidence 99999999999999999996532 245788877776643
No 237
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.31 E-value=2.4e-12 Score=122.78 Aligned_cols=106 Identities=29% Similarity=0.475 Sum_probs=82.2
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHH-HHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEE-LAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
..+|...+.||+|+||.||+|.. .|+.+|||++....... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788899999999999999987 48899999997643222 22346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++++. .+++..+.+++.
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ 112 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK----RIPPDILVNWAV 112 (271)
T ss_dssp EECCTTEEHHHHHTSS----CCCHHHHHHHHH
T ss_pred EEcCCCCCHHHHhhcC----CCCHHHHHHHHH
Confidence 9999999999999743 366666666554
No 238
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.31 E-value=4.2e-12 Score=121.47 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=77.6
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|.+.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788999999999999999985 578999999997654433344567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+ +|++.+++.... .+++..+.+++.
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~ 119 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQ 119 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHH
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 999 678988888643 367777766654
No 239
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.31 E-value=3.4e-12 Score=134.30 Aligned_cols=110 Identities=24% Similarity=0.329 Sum_probs=90.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||+||+|.. .+|+.||+|++...........+.+.+|++++.+++|||||++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788899999999999999987 46999999999765433222345688899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCC-CccCCHHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNEE-AVELDWAKRVNIV 468 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~-~~~l~w~~rl~ia 468 (471)
|||+++|+|.+++..... ...+++.....++
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~ 295 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHH
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHH
Confidence 999999999999986432 3456776665544
No 240
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.31 E-value=3.9e-12 Score=124.33 Aligned_cols=107 Identities=21% Similarity=0.223 Sum_probs=84.6
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 437 (471)
++|...+.||+|+||.||+|... +|+.||||++......... ..++.+|+..+.++ +|||||+++++|.+.+..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 47888999999999999999874 7999999998654332222 33445566555555 999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+ +|+|.+++.... ..++|..+.+|+.+
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~q 165 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRD 165 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHH
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHH
Confidence 9999 679999988643 35889888877654
No 241
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.31 E-value=2.1e-12 Score=124.23 Aligned_cols=107 Identities=30% Similarity=0.554 Sum_probs=88.1
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|...+.||+|+||.||+|.. .++..||+|++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5788899999999999999986 468899999997543322223457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+++.
T Consensus 94 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 121 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---RFDEQRSATFME 121 (284)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999998643 356666665543
No 242
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.31 E-value=3.7e-12 Score=133.18 Aligned_cols=108 Identities=29% Similarity=0.454 Sum_probs=85.5
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH----------HHHHHHHHHHHHHhccCCCCcccEEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL----------AFIKSFRNEAQVLSQVLHRNIVKLYGF 427 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~----------~~~~~~~~e~~~l~~l~H~niv~l~g~ 427 (471)
...|...+.||+|+||.||+|.. .++..||+|++........ ...+.+.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 35788999999999999999986 4688999999976432211 124578899999999999999999999
Q ss_pred EEeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 428 CLHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 428 ~~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|.+.+..++||||+++|+|.+++.... .+++..+.+|+.
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~ 153 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMK 153 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHH
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 999999999999999999999998543 367777666654
No 243
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.31 E-value=3.3e-12 Score=127.68 Aligned_cols=110 Identities=16% Similarity=0.240 Sum_probs=87.9
Q ss_pred hhhcccccccceeecCCccccEEEEE------eCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC---CCCcccEE
Q 042931 355 LIRATEDFDIRYCIGTGGYGSVYKAQ------LPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL---HRNIVKLY 425 (471)
Q Consensus 355 L~~at~~f~~~~~lG~G~~g~vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~ 425 (471)
+....+.|.+.+.||+|+||.||+|. ..+++.||||+++.... +++.+|++++.+++ |+||++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP------WEFYIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH------HHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh------hHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 34455789999999999999999993 45688999999986542 34556666666665 99999999
Q ss_pred EEEEeCCeeeEEEeccCCCChhhhhhcCC--CCccCCHHHHHHHHhc
Q 042931 426 GFCLHRKCMFLIYEYMEGGSLFCNLHNNE--EAVELDWAKRVNIVKA 470 (471)
Q Consensus 426 g~~~~~~~~~lV~ey~~~GsL~~~L~~~~--~~~~l~w~~rl~ia~g 470 (471)
+++...+..++||||+++|+|.++++... ....++|..+.+|+.+
T Consensus 134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~q 180 (365)
T 3e7e_A 134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180 (365)
T ss_dssp EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHH
T ss_pred eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHH
Confidence 99999999999999999999999998532 2356888888887754
No 244
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.31 E-value=1.6e-12 Score=128.77 Aligned_cols=107 Identities=21% Similarity=0.320 Sum_probs=87.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.+.|.+.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++|||||++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46788999999999999999986 67999999999754332222235688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+ +|+|.+++.... .+++....+++.
T Consensus 88 ~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~ 115 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK---RMTEDEGRRFFQ 115 (336)
T ss_dssp ECCC-CEEHHHHHHHHC---SCCHHHHHHHHH
T ss_pred EECC-CCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 9999 789999998543 366666665543
No 245
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.31 E-value=2.7e-12 Score=126.55 Aligned_cols=105 Identities=29% Similarity=0.434 Sum_probs=79.4
Q ss_pred cccccceeecCCccccEEEEEe----CCCcEEEEEEccccchHH-HHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSETEE-LAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
++|...+.||+|+||.||++.. .+|+.||+|+++...... ....+.+.+|++++++++|||||++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5788999999999999999976 468999999998653221 12345677899999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHH
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNI 467 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~i 467 (471)
++||||+++|+|.+++.... .+.+.....+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~ 126 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG---IFMEDTACFY 126 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS---SCCHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHhCC---CCCHHHHHHH
Confidence 99999999999999998543 2444444443
No 246
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.31 E-value=6.1e-12 Score=121.05 Aligned_cols=107 Identities=27% Similarity=0.544 Sum_probs=86.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH-HH---HHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL-AF---IKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~-~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
++|...+.||+|+||.||+|.. .+++.||+|++........ .. .+.+.+|++++.+++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788889999999999999986 5799999999965432211 11 167889999999999999999999986544
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
++||||+++|+|.+++.... .+++|..+.+++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~ 130 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLD 130 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHH
Confidence 79999999999999998643 35788877776643
No 247
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.31 E-value=5e-12 Score=130.06 Aligned_cols=106 Identities=22% Similarity=0.343 Sum_probs=86.3
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|.+.+.||+|+||.||+|.. .+|..+|+|++....... ...+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH-HHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 35788899999999999999975 579999999997655332 3356788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
|||+++|+|.+++.... .+++....+++
T Consensus 89 ~E~~~gg~L~~~i~~~~---~~~e~~~~~i~ 116 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE---YYSEADASHCI 116 (444)
T ss_dssp ECCCBCCBHHHHHHHCS---CCCHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHH
Confidence 99999999999998653 35555555444
No 248
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.31 E-value=4.7e-12 Score=126.21 Aligned_cols=105 Identities=28% Similarity=0.314 Sum_probs=88.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|...+.||+|+||.||++.. .+|..||+|++..... ....+.+.+|++++.+++|||||++++++...+..++||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC--HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC--HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 5788899999999999999986 4689999999976532 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.++++... .+++....+|+.
T Consensus 111 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 138 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG---RIPEQILGKVSI 138 (360)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHcC---CCCHHHHHHHHH
Confidence 9999999999998643 356666555543
No 249
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.31 E-value=1.3e-12 Score=134.36 Aligned_cols=108 Identities=19% Similarity=0.275 Sum_probs=80.6
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++++++++|||||+++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46789999999999999999985 57999999999754322223345678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... .+++.....++.
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 255 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGA 255 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHH
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 99999999999998543 366666665543
No 250
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.30 E-value=2.4e-12 Score=124.10 Aligned_cols=108 Identities=20% Similarity=0.370 Sum_probs=88.5
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||++.. .++..+|+|++...... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 4688889999999999999986 56899999999754321 12356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC-CCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNE-EAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... ....+++....+|+.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 131 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMK 131 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHH
Confidence 9999999999997532 224567777766654
No 251
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.30 E-value=4.7e-12 Score=122.73 Aligned_cols=107 Identities=20% Similarity=0.278 Sum_probs=81.9
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHH-----------------------HHHHHHHHHHHHHHh
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEE-----------------------LAFIKSFRNEAQVLS 414 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~-----------------------~~~~~~~~~e~~~l~ 414 (471)
.++|...+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35788999999999999999985 568999999997543211 112356889999999
Q ss_pred ccCCCCcccEEEEEEe--CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 415 QVLHRNIVKLYGFCLH--RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 415 ~l~H~niv~l~g~~~~--~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+++|||||++++++.+ .+..++||||+++|+|.+++.. .++++....+++.
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~ 144 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQ 144 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHH
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHH
Confidence 9999999999999987 5678999999999999887653 2467777766654
No 252
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.30 E-value=4e-12 Score=121.69 Aligned_cols=104 Identities=24% Similarity=0.396 Sum_probs=87.1
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||+|.. .++..+|+|++....... .+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 4688889999999999999986 457899999997643222 356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+|+.
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~ 113 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR---VFRESDAARIMK 113 (277)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHH
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 9999999999998543 366776666654
No 253
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.30 E-value=1.6e-12 Score=136.99 Aligned_cols=106 Identities=25% Similarity=0.436 Sum_probs=88.1
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.++|.+.+.||+|+||.||+|...++..||||+++..... .++|.+|++++++++|||||++++++.+ +..+|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 4568888999999999999999887888999999865432 3568899999999999999999999975 6789999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||++|+|.++++... ...+++..+++|+.+
T Consensus 341 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~q 371 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQ 371 (535)
T ss_dssp CCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHH
T ss_pred ehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHH
Confidence 9999999999998531 234677777776653
No 254
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.30 E-value=4.7e-12 Score=121.22 Aligned_cols=111 Identities=29% Similarity=0.512 Sum_probs=90.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe--CCeee
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMF 435 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 435 (471)
.++|...+.||+|+||.||++.. .+|+.||+|++....... ...+.+.+|++++++++||||+++++++.+ .+..+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 45788899999999999999986 578999999997644322 335678899999999999999999998865 56789
Q ss_pred EEEeccCCCChhhhhhcCC-CCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNE-EAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~-~~~~l~w~~rl~ia~g 470 (471)
+||||+++|+|.+++.... ....+++..+.+|+.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 119 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHH
Confidence 9999999999999998532 2345788887777653
No 255
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=7.3e-14 Score=140.45 Aligned_cols=164 Identities=24% Similarity=0.266 Sum_probs=125.3
Q ss_pred CCCCCEEeccCCCCCCcCCccc----C-CCCCCcEEEcccCCCCCCCCCcc-CCCCCcCEEEccCCCCCCCCcccc----
Q 042931 155 LSKLQRLDLSSNRLTGSIPSEI----G-NLRNLVYLNISKNILTGTVPSTL-GSLTNLKNMGLSYNQLSGPLPQEI---- 224 (471)
Q Consensus 155 L~~L~~L~Ls~N~l~g~iP~~l----~-~L~~L~~L~L~~N~l~g~~p~~l-~~l~~L~~L~L~~N~l~g~~p~~l---- 224 (471)
+++|++|+|++|.++..-...+ . +.++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4689999999999985433333 2 33799999999999875433333 346789999999999975433333
Q ss_pred -cCCCCCCEEeCCCCcccc----ccccccCCCCCCCEEECCCCcCCCC----CcccccCCCCCCEEeccCCcCcCC----
Q 042931 225 -GNLKNLMELDLGTNSLIG----PIPSTLGRLTNLNYMSLSRNMFGGL----LPQEIGNLKNLIELNVGSNSLIGP---- 291 (471)
Q Consensus 225 -~~l~~L~~L~Ls~N~l~g----~ip~~l~~l~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~L~~N~l~g~---- 291 (471)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 346889999999999875 3556667889999999999998742 355667788999999999998753
Q ss_pred CchhhhcCCCCCcccCCCCcCcccccc
Q 042931 292 IPSTLGLLTDLSYLDLSCNQFSSSIPN 318 (471)
Q Consensus 292 ip~~l~~l~~L~~L~l~~N~l~g~ip~ 318 (471)
++..+...++|++|+|++|.++..-..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 445566779999999999999764433
No 256
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.30 E-value=3.3e-12 Score=122.61 Aligned_cols=107 Identities=23% Similarity=0.386 Sum_probs=88.2
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
+.|...+.||+|+||.||++... +|+.||+|.+........ ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888899999999999999874 699999999975432211 12457889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.+++.... .+++..+.+++.
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 115 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLK 115 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999999998532 467777777654
No 257
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.30 E-value=7.9e-12 Score=121.73 Aligned_cols=106 Identities=25% Similarity=0.345 Sum_probs=87.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD-PVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 4688889999999999999986 45999999999765432 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++++|.++++... .+++....+|+.
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~ 109 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITW 109 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHH
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHH
Confidence 9999999999887543 366666666553
No 258
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.29 E-value=7.8e-12 Score=120.91 Aligned_cols=108 Identities=23% Similarity=0.369 Sum_probs=88.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccc------hHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEe
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE------TEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLH 430 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~ 430 (471)
.++|...+.||+|+||.||+|.. .+|+.||||+++... .......+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 35788899999999999999986 568999999996542 111234567889999999996 9999999999999
Q ss_pred CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 431 RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 431 ~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.+..++||||+++|+|.++++... .+++..+.+++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 131 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMR 131 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHH
Confidence 999999999999999999998532 466666666554
No 259
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.29 E-value=5.5e-12 Score=123.35 Aligned_cols=106 Identities=27% Similarity=0.438 Sum_probs=84.7
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.+.|...+.||+|+||.||+|...+|+.||+|++...... ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 4678899999999999999999888999999999754322 223467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||+++ +|.+++..... .+++.....++
T Consensus 99 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~ 125 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKT--GLQDSQIKIYL 125 (311)
T ss_dssp ECCSE-EHHHHHHTCTT--CCCHHHHHHHH
T ss_pred cCCCC-CHHHHHHhccC--CCCHHHHHHHH
Confidence 99985 88888886432 35666555544
No 260
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.29 E-value=2.2e-12 Score=127.54 Aligned_cols=97 Identities=23% Similarity=0.437 Sum_probs=82.1
Q ss_pred hhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchH--HHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC
Q 042931 355 LIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETE--ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR 431 (471)
Q Consensus 355 L~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 431 (471)
+....+.|...+.||+|+||.||+|.. .++..||+|++...... .....+.+.+|++++++++|||||++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344456899999999999999999986 56889999999754321 122346788999999999999999999999999
Q ss_pred CeeeEEEeccCCCChhhhhh
Q 042931 432 KCMFLIYEYMEGGSLFCNLH 451 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~ 451 (471)
+..++||||+++|+|.++++
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEE
T ss_pred CeEEEEEeCCCCCcHHHHHH
Confidence 99999999999999999996
No 261
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.29 E-value=6.8e-12 Score=120.43 Aligned_cols=107 Identities=21% Similarity=0.405 Sum_probs=88.5
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .+|..||+|++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 35788999999999999999986 56899999999765432 23346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... .+++....+++.
T Consensus 84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ 112 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE---FYSEADASHCIQ 112 (284)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 99999999999988543 356666665543
No 262
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.29 E-value=1.2e-11 Score=121.31 Aligned_cols=103 Identities=22% Similarity=0.348 Sum_probs=85.1
Q ss_pred ccccceeecCCccccEEEEEeC-----CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC--Ce
Q 042931 361 DFDIRYCIGTGGYGSVYKAQLP-----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--KC 433 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~ 433 (471)
.|...+.||+|+||.||++.+. +++.||||++..... ....+.+.+|++++++++|||||++++++.+. ..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC--hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 4588899999999999988642 588999999986532 23356788999999999999999999999884 57
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.+++.+.. +++..+.+|+.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~ 141 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQ 141 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSC----CCHHHHHHHHH
T ss_pred EEEEEecccCCcHHHHHhhCC----CCHHHHHHHHH
Confidence 799999999999999998643 67777776654
No 263
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.29 E-value=8.2e-12 Score=119.25 Aligned_cols=105 Identities=24% Similarity=0.389 Sum_probs=87.6
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|...+.||+|+||.||+|.. .+++.||+|+++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 5788899999999999999986 47899999999754322 22467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.++++... .+++....+++.
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 112 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFH 112 (276)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHH
T ss_pred EecCCCcHHHHHhhcc---CCCHHHHHHHHH
Confidence 9999999999998542 466666666554
No 264
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.29 E-value=2.7e-12 Score=128.09 Aligned_cols=107 Identities=18% Similarity=0.299 Sum_probs=86.6
Q ss_pred ccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
..+|...+.||+|+||.||+|... +|+.||+|+++..........+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999874 5889999999765332222345677899999887 89999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||||+++|+|.++++... .+++.....++
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~ 127 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYA 127 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHH
Confidence 999999999999998543 35555555544
No 265
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.28 E-value=3.8e-12 Score=124.92 Aligned_cols=107 Identities=27% Similarity=0.411 Sum_probs=87.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
+.|.+.+.||+|+||.||+|.. .+|..||+|++........ ...+.+.+|++++.+++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 4688899999999999999986 4689999999975432110 12356889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.+++.... .+++..+.+|+.
T Consensus 92 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 122 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE---SLSEEEATSFIK 122 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS---CEEHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999999998643 466666666554
No 266
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.28 E-value=6.7e-12 Score=123.61 Aligned_cols=96 Identities=23% Similarity=0.346 Sum_probs=80.9
Q ss_pred ceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEeCCeeeEEEeccC
Q 042931 365 RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYME 442 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ey~~ 442 (471)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+|++++.++. |||||++++++.+.+..++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 36799999999999986 568999999996542 245668999999997 9999999999999999999999999
Q ss_pred CCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 443 GGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 443 ~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+|+|.++++... .+++....+|+.
T Consensus 90 ~~~L~~~l~~~~---~~~~~~~~~i~~ 113 (325)
T 3kn6_A 90 GGELFERIKKKK---HFSETEASYIMR 113 (325)
T ss_dssp SCBHHHHHHHCS---CCCHHHHHHHHH
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999998643 467776666554
No 267
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.28 E-value=2e-12 Score=128.13 Aligned_cols=110 Identities=24% Similarity=0.369 Sum_probs=89.7
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHH--------------HHHHHHHHHHHHhccCCCCcccE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELA--------------FIKSFRNEAQVLSQVLHRNIVKL 424 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~--------------~~~~~~~e~~~l~~l~H~niv~l 424 (471)
.++|...+.||+|+||.||+|.. +|..||||++......... ..+.+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 9999999999754221100 11678899999999999999999
Q ss_pred EEEEEeCCeeeEEEeccCCCChhhh------hhcCCCCccCCHHHHHHHHhc
Q 042931 425 YGFCLHRKCMFLIYEYMEGGSLFCN------LHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 425 ~g~~~~~~~~~lV~ey~~~GsL~~~------L~~~~~~~~l~w~~rl~ia~g 470 (471)
++++.+.+..++||||+++|+|.++ ++.. ....+++..+.+|+.+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~q 159 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKS 159 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHH
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHH
Confidence 9999999999999999999999999 5532 2356788877776643
No 268
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.28 E-value=3.8e-12 Score=132.31 Aligned_cols=107 Identities=24% Similarity=0.419 Sum_probs=87.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4688889999999999999986 479999999996543221122467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+|+.
T Consensus 106 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~ 133 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK---RFSEVDAARIIR 133 (484)
T ss_dssp CCCCSCBHHHHHHTCS---CCBHHHHHHHHH
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999998643 366666666554
No 269
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.28 E-value=3.7e-12 Score=128.04 Aligned_cols=95 Identities=26% Similarity=0.407 Sum_probs=72.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHH-HhccCCCCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQV-LSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
.++|...+.||+|+||+||++.. .++..||+|+++..........+.+.+|..+ ++.++|||||++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 45799999999999999999986 4688999999976543333334556667776 577899999999999999999999
Q ss_pred EEeccCCCChhhhhhcC
Q 042931 437 IYEYMEGGSLFCNLHNN 453 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~ 453 (471)
||||+++|+|.++++..
T Consensus 117 v~E~~~gg~L~~~l~~~ 133 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE 133 (373)
T ss_dssp EEECCCSCBHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhc
Confidence 99999999999999864
No 270
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.28 E-value=8.9e-12 Score=119.67 Aligned_cols=107 Identities=25% Similarity=0.339 Sum_probs=86.2
Q ss_pred cccccccceeecCCccccEEEEEeCC----CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
..+.|...+.||+|+||.||+|.... +..||+|++..... ....+.+.+|+.++++++|||||++++++. .+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 34578889999999999999998632 45799999976432 233567889999999999999999999984 567
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.++++... ..+++..+.+++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 123 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAY 123 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHH
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHH
Confidence 899999999999999998643 3467777776654
No 271
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.28 E-value=5.6e-12 Score=122.17 Aligned_cols=106 Identities=25% Similarity=0.407 Sum_probs=83.5
Q ss_pred cccccceeecCCccccEEEEEe-----CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC--C
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--K 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~ 432 (471)
+.|...+.||+|+||.||+|.+ .+++.||+|++...... ...+.+.+|++++.+++||||+++++++... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 3578889999999999999983 46889999999754321 2246788999999999999999999999876 5
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 133 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAV 133 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHH
Confidence 6799999999999999997533 2467777776654
No 272
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.28 E-value=8e-12 Score=122.82 Aligned_cols=105 Identities=26% Similarity=0.381 Sum_probs=87.1
Q ss_pred cccccceeecCCccccEEEEEe-----CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe--CC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RK 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~ 432 (471)
+.|...+.||+|+||.||++.+ .++..||||++..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP---DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH---HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH---HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 5788899999999999999984 3588999999986542 234678899999999999999999999874 55
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 134 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSS 134 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHH
T ss_pred eEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHH
Confidence 6889999999999999998632 2477877777654
No 273
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.28 E-value=1.2e-11 Score=119.15 Aligned_cols=106 Identities=25% Similarity=0.372 Sum_probs=84.9
Q ss_pred cccccce-eecCCccccEEEEEeC---CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRY-CIGTGGYGSVYKAQLP---NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~-~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
++|.... .||+|+||.||+|... .+..||||+++.... ....+.+.+|++++.+++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc--hhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 3455555 8999999999999753 577899999986532 23356788999999999999999999999 556789
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+||||+++|+|.+++.... ..+++..+.+++.+
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~q 118 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQ 118 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHH
Confidence 9999999999999997533 34777777776643
No 274
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.28 E-value=4.4e-12 Score=121.53 Aligned_cols=106 Identities=25% Similarity=0.458 Sum_probs=87.5
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.+.|...+.||+|+||.||+|...++..||+|++...... .+.+.+|++++.+++||||+++++++. .+..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 3578889999999999999999888889999999765422 356889999999999999999999986 45689999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||+++|+|.++++... ...+++..+.+|+.+
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~q 117 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQ 117 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHH
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHH
Confidence 9999999999998532 234778777776643
No 275
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.27 E-value=1.2e-11 Score=119.66 Aligned_cols=101 Identities=28% Similarity=0.482 Sum_probs=80.4
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhc--cCCCCcccEEEEEEeC----C
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ--VLHRNIVKLYGFCLHR----K 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~----~ 432 (471)
.++|...+.||+|+||.||+|.. +|+.||||++..... +.+.+|.+++.. ++||||+++++++... .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE------KSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH------HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc------hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 35788999999999999999987 789999999975432 234445555544 8999999999997653 4
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..++||||+++|+|.++++.. .++|..+.+|+.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~ 113 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLS 113 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHH
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHH
Confidence 578999999999999999753 4788888777653
No 276
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.27 E-value=8.1e-12 Score=122.01 Aligned_cols=109 Identities=19% Similarity=0.357 Sum_probs=87.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe----CCe
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH----RKC 433 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 433 (471)
.+.|...+.||+|+||.||++.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ---QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH---HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH---HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 35788999999999999999986 6799999999965432 234678899999999999999999999973 347
Q ss_pred eeEEEeccCCCChhhhhhcC-CCCccCCHHHHHHHHhc
Q 042931 434 MFLIYEYMEGGSLFCNLHNN-EEAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~-~~~~~l~w~~rl~ia~g 470 (471)
.++||||+++|+|.++++.. .....+++..+.+|+..
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~q 142 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 79999999999999999863 22345778877776643
No 277
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.27 E-value=6.9e-12 Score=128.05 Aligned_cols=107 Identities=22% Similarity=0.313 Sum_probs=84.1
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchH-----HHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETE-----ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 432 (471)
.+.|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++++++|||||++++++. .+
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence 45788999999999999999986 56899999999754321 1112235789999999999999999999985 55
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.+++.... .+++.....|+.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~ 246 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFY 246 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHH
T ss_pred ceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHH
Confidence 6799999999999999998643 467776665543
No 278
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.27 E-value=4.4e-12 Score=124.31 Aligned_cols=117 Identities=26% Similarity=0.407 Sum_probs=83.7
Q ss_pred hhhhhcccccccceeecCCccccEEEEEeCC-C---cEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 353 EDLIRATEDFDIRYCIGTGGYGSVYKAQLPN-G---KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 353 ~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~-g---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
+++.-..+.|...+.||+|+||.||+|.... + ..||||++....... ...+.+.+|++++++++|||||++++++
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhcee
Confidence 3444455689999999999999999998643 3 279999997643222 2356788999999999999999999999
Q ss_pred EeCCee------eEEEeccCCCChhhhhhcCC---CCccCCHHHHHHHHhc
Q 042931 429 LHRKCM------FLIYEYMEGGSLFCNLHNNE---EAVELDWAKRVNIVKA 470 (471)
Q Consensus 429 ~~~~~~------~lV~ey~~~GsL~~~L~~~~---~~~~l~w~~rl~ia~g 470 (471)
...+.. ++||||+++|+|.+++.... ....+++..+.+|+..
T Consensus 95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q 145 (323)
T 3qup_A 95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD 145 (323)
T ss_dssp ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHH
T ss_pred eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHH
Confidence 887655 99999999999999997532 2235788888776643
No 279
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.27 E-value=1.2e-11 Score=121.61 Aligned_cols=105 Identities=30% Similarity=0.490 Sum_probs=85.9
Q ss_pred cccccceeecCCccccEEEEEe-----CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC--
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK-- 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-- 432 (471)
+.|.+.+.||+|+||.||++.+ .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS---HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 5688889999999999999984 3588999999976542 23467889999999999999999999987654
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++... ..+++..+.+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 152 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 152 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHH
Confidence 6799999999999999998643 2467777776654
No 280
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.27 E-value=5.6e-12 Score=122.02 Aligned_cols=99 Identities=23% Similarity=0.412 Sum_probs=76.4
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhc--cCCCCcccEEEEEEeCC----e
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ--VLHRNIVKLYGFCLHRK----C 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~ 433 (471)
+.|.+.+.||+|+||.||+|.. +|+.||||++.... .+.+.+|.+++.. ++||||+++++++...+ .
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 4688899999999999999986 48899999997543 2345667777776 79999999999998876 7
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.+++++.. +++..+.+++.
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~ 107 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLAL 107 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHCC----BCC-CHHHHC-
T ss_pred eEEEEeccCCCCHHHHHhccC----cchHHHHHHHH
Confidence 899999999999999997642 44555555443
No 281
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.27 E-value=8.7e-12 Score=120.80 Aligned_cols=106 Identities=25% Similarity=0.395 Sum_probs=85.3
Q ss_pred ccccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.+.|.+.+.||+|+||.||+|... ++..||+|++...... ..+.+.+|++++.+++||||+++++++...+..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE---ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C---CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH---HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 357888899999999999999874 6899999999754322 245788899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... ..+++..+.+++.
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~ 124 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCR 124 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHH
Confidence 99999999999987532 2367777666654
No 282
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.26 E-value=9.2e-12 Score=122.96 Aligned_cols=107 Identities=32% Similarity=0.434 Sum_probs=86.9
Q ss_pred cccccceeecCCccccEEEEEeCC-----CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPN-----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
..|...+.||+|+||.||+|.... +..||||+++..... ...+.+.+|++++++++|||||++++++...+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE--KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 457778899999999999997532 246999999764322 2345788999999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
++||||+++|+|.++++... ..+++..+.+|+.+
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~q 155 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRG 155 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHH
Confidence 99999999999999998643 34677777776643
No 283
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.26 E-value=5.5e-12 Score=122.06 Aligned_cols=110 Identities=23% Similarity=0.401 Sum_probs=75.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .++..||||++...... ...+++.+|++++.+++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 35788899999999999999985 57899999999754321 2345788899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcC-----CCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNN-----EEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~-----~~~~~l~w~~rl~ia~g 470 (471)
|||+++|+|.+++... .....+++..+.+|+.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~q 129 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHH
Confidence 9999999999999741 12345788877776643
No 284
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.26 E-value=1.3e-11 Score=121.32 Aligned_cols=109 Identities=28% Similarity=0.490 Sum_probs=87.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcE--EEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKV--FALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~--vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 435 (471)
++|...+.||+|+||.||+|.. .+|.. +|+|++..... ....+.+.+|++++.++ +||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc--hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 5788889999999999999986 45664 49999975432 22345788999999999 9999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCC-------------CCccCCHHHHHHHHhc
Q 042931 436 LIYEYMEGGSLFCNLHNNE-------------EAVELDWAKRVNIVKA 470 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~-------------~~~~l~w~~rl~ia~g 470 (471)
+||||+++|+|.++++... ....+++..+.+|+.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q 150 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHH
Confidence 9999999999999998653 1245788877776643
No 285
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.26 E-value=1e-11 Score=120.67 Aligned_cols=103 Identities=25% Similarity=0.388 Sum_probs=83.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||++.. .+|+.||+|+++..... ..+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 4688889999999999999986 47999999999764322 2356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||+++|+|.+++.... .+++....+++
T Consensus 86 e~~~~~~L~~~l~~~~---~~~~~~~~~~~ 112 (304)
T 2jam_A 86 QLVSGGELFDRILERG---VYTEKDASLVI 112 (304)
T ss_dssp CCCCSCBHHHHHHHHS---CCCHHHHHHHH
T ss_pred EcCCCccHHHHHHHcC---CCCHHHHHHHH
Confidence 9999999999997543 35565555554
No 286
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.26 E-value=1.2e-11 Score=120.84 Aligned_cols=104 Identities=20% Similarity=0.382 Sum_probs=83.5
Q ss_pred ccccc-ceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeE
Q 042931 360 EDFDI-RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 360 ~~f~~-~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 436 (471)
+.|.+ .+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 34655 36799999999999985 57999999999754322 135678899999884 79999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.++++... .+++.....|+.
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 118 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKRR---HFNELEASVVVQ 118 (316)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEEcCCCCcHHHHHhccC---CCCHHHHHHHHH
Confidence 999999999999998643 356666655543
No 287
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.26 E-value=1.4e-11 Score=123.46 Aligned_cols=108 Identities=25% Similarity=0.372 Sum_probs=89.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccc-----hHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-----TEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHR 431 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 431 (471)
...|...+.||+|+||.||+|.. .+|+.||||+++... .......+.+.+|+.++.++ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 45788899999999999999987 479999999986532 11123356788999999999 799999999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
...++||||+++|+|.+++.... .+++..+..++.
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~ 207 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMR 207 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 99999999999999999998532 467777766654
No 288
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.26 E-value=1.2e-11 Score=119.44 Aligned_cols=104 Identities=24% Similarity=0.493 Sum_probs=84.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe-------
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH------- 430 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------- 430 (471)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH----HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH----HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 35788899999999999999986 579999999996532 234678899999999999999999999865
Q ss_pred ------CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 431 ------RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 431 ------~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
.+..++||||+++|+|.++++... ..+++....+|+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~ 122 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLF 122 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHH
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHH
Confidence 356799999999999999998643 244555555544
No 289
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=4.3e-12 Score=125.15 Aligned_cols=132 Identities=15% Similarity=0.194 Sum_probs=101.2
Q ss_pred CCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCcc-------c----------
Q 042931 179 LRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSL-------I---------- 241 (471)
Q Consensus 179 L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l-------~---------- 241 (471)
+++|+.|+|.. .++..-+..|.++++|+.+++++|.+....+..|.++.++..+.+..+.. .
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 99999999999 77755556799999999999999998766667787777777776655221 0
Q ss_pred ---------ccccccc----------------------------CCCCCCCEEECCCCcCCCCCcccccCCCCCCEEecc
Q 042931 242 ---------GPIPSTL----------------------------GRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVG 284 (471)
Q Consensus 242 ---------g~ip~~l----------------------------~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~ 284 (471)
+.++..+ ..+++|+.+++++|+++..-+..|.++.+|+.+++.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0011100 027899999999999987666789999999999999
Q ss_pred CCcCcCCCchhhhcCCCCC-cccCCCCcCc
Q 042931 285 SNSLIGPIPSTLGLLTDLS-YLDLSCNQFS 313 (471)
Q Consensus 285 ~N~l~g~ip~~l~~l~~L~-~L~l~~N~l~ 313 (471)
+| +...-+..|..+++|+ .+++.+ .++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~ 286 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVT 286 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cce
Confidence 98 6666667899999999 999987 554
No 290
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.26 E-value=7.7e-12 Score=119.87 Aligned_cols=102 Identities=27% Similarity=0.500 Sum_probs=84.0
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe--------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH-------- 430 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-------- 430 (471)
.+|...+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 46888899999999999999874 79999999997643 245679999999999999999999864
Q ss_pred --------CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 431 --------RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 431 --------~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
....++||||+++|+|.++++... ...+++..+.+|+.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFE 129 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHH
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHH
Confidence 345799999999999999998532 23577777776654
No 291
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.26 E-value=8.5e-12 Score=120.34 Aligned_cols=106 Identities=32% Similarity=0.443 Sum_probs=85.8
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
++|...+.||+|+||.||+|...+|+.||+|++....... ...+.+.+|++++++++|||||++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc-ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 4688889999999999999988789999999997544221 123567789999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++ +|.+++....+ .+++....+++.
T Consensus 81 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~ 107 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEG--GLESVTAKSFLL 107 (288)
T ss_dssp CCSE-EHHHHHHTSTT--CCCHHHHHHHHH
T ss_pred ecCC-CHHHHHHhccc--CCCHHHHHHHHH
Confidence 9985 99999886432 356665555543
No 292
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.25 E-value=1.6e-11 Score=118.31 Aligned_cols=105 Identities=24% Similarity=0.346 Sum_probs=84.7
Q ss_pred ccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe----CCeee
Q 042931 361 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH----RKCMF 435 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~ 435 (471)
.|.....||+|+||.||+|.. .++..||+|++....... ...+.+.+|++++++++|||||++++++.. ....+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 467778999999999999986 568899999997654322 335678899999999999999999999876 35679
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.++++... .+++..+.+|+.
T Consensus 106 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ 136 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK---VMKIKVLRSWCR 136 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHcc---CCCHHHHHHHHH
Confidence 9999999999999998632 356666665543
No 293
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.25 E-value=9.9e-12 Score=121.13 Aligned_cols=112 Identities=21% Similarity=0.311 Sum_probs=88.9
Q ss_pred hhcccccccceeecCCccccEEEEEe------CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEE
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFC 428 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 428 (471)
....++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++.++ +||||++++++|
T Consensus 23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCc--HHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 34457899999999999999999973 34689999999765432 2346788999999999 789999999999
Q ss_pred EeCC-eeeEEEeccCCCChhhhhhcCCC-------------CccCCHHHHHHHHh
Q 042931 429 LHRK-CMFLIYEYMEGGSLFCNLHNNEE-------------AVELDWAKRVNIVK 469 (471)
Q Consensus 429 ~~~~-~~~lV~ey~~~GsL~~~L~~~~~-------------~~~l~w~~rl~ia~ 469 (471)
...+ ..++||||+++|+|.++++.... ...+++..+.+++.
T Consensus 101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 2xir_A 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155 (316)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHH
T ss_pred ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHH
Confidence 8754 58999999999999999996543 12267777776654
No 294
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.25 E-value=8e-12 Score=130.29 Aligned_cols=106 Identities=25% Similarity=0.376 Sum_probs=82.2
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
..|...+.||+|+||.||+|.. .++..||+|++....... ...+.+.+|+.++++++|||||+++++|.+.+..++||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688889999999999999986 468999999997643221 12356788999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+|+.
T Consensus 116 e~~~~g~L~~~~~~~~---~~~~~~~~~i~~ 143 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM---KFNEVDAAVIIK 143 (494)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 9999999999988543 356665555543
No 295
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.25 E-value=7.4e-12 Score=123.24 Aligned_cols=112 Identities=22% Similarity=0.328 Sum_probs=89.7
Q ss_pred hhcccccccceeecCCccccEEEEEeC-CC-----cEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEE
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQLP-NG-----KVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFC 428 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~~-~g-----~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~ 428 (471)
.-..++|...+.||+|+||.||+|... .+ ..||+|.+...... ...+.+.+|++++.++ +|||||+++++|
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccCh--HHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 334567889999999999999999853 23 48999999765422 2346788999999999 899999999999
Q ss_pred EeCCeeeEEEeccCCCChhhhhhcCCC-----------CccCCHHHHHHHHh
Q 042931 429 LHRKCMFLIYEYMEGGSLFCNLHNNEE-----------AVELDWAKRVNIVK 469 (471)
Q Consensus 429 ~~~~~~~lV~ey~~~GsL~~~L~~~~~-----------~~~l~w~~rl~ia~ 469 (471)
...+..++||||+++|+|.++++.... ...+++..+.+++.
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence 999999999999999999999985321 23467777776654
No 296
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.25 E-value=1.2e-11 Score=121.81 Aligned_cols=108 Identities=24% Similarity=0.371 Sum_probs=85.1
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
...+.|...+.||+|+||.||+|.. .+++.||||+++..... ....+.+.+|++++++++|||||++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3446799999999999999999975 57899999999765432 233456778999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||++ |+|.+++.... .+++....+|+.
T Consensus 110 lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ 139 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLY 139 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT---TCCHHHHHHHHH
T ss_pred EEEecCC-CCHHHHHhhcC---CCCHHHHHHHHH
Confidence 9999998 59999998653 366666666554
No 297
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.25 E-value=7.1e-12 Score=124.45 Aligned_cols=100 Identities=20% Similarity=0.349 Sum_probs=81.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 437 (471)
++|...+.||+|+||.||++.. .+|+.||||+++.... .+.+|++++.++ +|||||++++++.+.+..++|
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 5788889999999999999986 4689999999976432 233577888777 799999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... .+++.....++.
T Consensus 95 ~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~ 123 (342)
T 2qr7_A 95 TELMKGGELLDKILRQK---FFSEREASAVLF 123 (342)
T ss_dssp ECCCCSCBHHHHHHTCT---TCCHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHH
Confidence 99999999999998643 356655555443
No 298
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.25 E-value=1.6e-11 Score=119.24 Aligned_cols=104 Identities=33% Similarity=0.458 Sum_probs=87.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||+|.. .+++.||+|++....... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST--THHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH--HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4578889999999999999975 568999999997543221 2467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++... ++++..+.+++.
T Consensus 100 e~~~~~~L~~~~~~~----~~~~~~~~~~~~ 126 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG----PLDETQIATILR 126 (303)
T ss_dssp ECCTTEEHHHHHTTS----CCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHH
Confidence 999999999999753 467777777654
No 299
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.25 E-value=1.1e-11 Score=132.71 Aligned_cols=105 Identities=25% Similarity=0.368 Sum_probs=83.6
Q ss_pred ccccce-eecCCccccEEEEEeC---CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 361 DFDIRY-CIGTGGYGSVYKAQLP---NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 361 ~f~~~~-~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
++.... .||+|+||.||+|.+. ++..||||+++..... ...++|.+|++++++++|||||+++++|.. +..++
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 333344 7999999999999763 4667999999764321 124678899999999999999999999976 56899
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+++|+|.++++... ..++|..+.+|+.+
T Consensus 413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~q 444 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQ 444 (613)
T ss_dssp EEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHH
Confidence 999999999999998643 35788888777654
No 300
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.25 E-value=1.8e-11 Score=120.52 Aligned_cols=108 Identities=25% Similarity=0.383 Sum_probs=89.0
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
..+.|.....||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++.+++|||||+++++|.+.+..++
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD-KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCc-hHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 346788999999999999999986 45999999998654332 2334667899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++++|.+++.... .+++..+.+|+.
T Consensus 102 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ 131 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFPN---GLDYQVVQKYLF 131 (331)
T ss_dssp EEECCSEEHHHHHHHSTT---CCCHHHHHHHHH
T ss_pred EEecCCcchHHHHHhhcc---CCCHHHHHHHHH
Confidence 999999999998877543 367777666554
No 301
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.25 E-value=1.4e-11 Score=120.21 Aligned_cols=117 Identities=21% Similarity=0.367 Sum_probs=87.3
Q ss_pred hhhhhcccccccceeecCCccccEEEEEeC----CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE
Q 042931 353 EDLIRATEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC 428 (471)
Q Consensus 353 ~dL~~at~~f~~~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 428 (471)
+++.-..+.|...+.||+|+||.||+|... .+..||+|++...... ....+.+.+|++++++++||||+++++++
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 444555678999999999999999999753 3458999999754322 23346788999999999999999999999
Q ss_pred EeCCe-----eeEEEeccCCCChhhhhhcC---CCCccCCHHHHHHHHhc
Q 042931 429 LHRKC-----MFLIYEYMEGGSLFCNLHNN---EEAVELDWAKRVNIVKA 470 (471)
Q Consensus 429 ~~~~~-----~~lV~ey~~~GsL~~~L~~~---~~~~~l~w~~rl~ia~g 470 (471)
...+. .++||||+++|+|.+++... .....+++..+.+|+.+
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q 155 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHH
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHH
Confidence 87553 49999999999999999643 23456788888777653
No 302
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.24 E-value=1e-11 Score=121.80 Aligned_cols=114 Identities=25% Similarity=0.412 Sum_probs=90.7
Q ss_pred chhhhhhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEE
Q 042931 350 IVYEDLIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGF 427 (471)
Q Consensus 350 ~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~ 427 (471)
+.+.++....+.|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.++ +||||++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 45556667778899999999999999999986 57999999999754322 24677899999998 89999999999
Q ss_pred EEe------CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 428 CLH------RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 428 ~~~------~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
+.. .+..++||||+++|+|.++++... ...+++....+|+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~ 135 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYIC 135 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHH
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHH
Confidence 987 467899999999999999998642 2345665555554
No 303
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.24 E-value=1.7e-11 Score=118.48 Aligned_cols=106 Identities=25% Similarity=0.363 Sum_probs=84.1
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|...+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC-CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 4688889999999999999986 568999999997543222 23466788999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++ ++.+.+.... ..+++....+|+.
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ 108 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLF 108 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHH
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHH
Confidence 99986 6666665432 2466666665553
No 304
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.24 E-value=1.1e-11 Score=121.58 Aligned_cols=107 Identities=22% Similarity=0.349 Sum_probs=72.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
..+|...+.||+|+||.||+|.. .+|+.||+|+++..... ...+.+.+|++++++++|||||++++++...+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 45788899999999999999986 56899999999754321 1124677899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCC---CCccCCHHHHHHHH
Q 042931 438 YEYMEGGSLFCNLHNNE---EAVELDWAKRVNIV 468 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~---~~~~l~w~~rl~ia 468 (471)
|||++ |+|.+++.... ....+++..+..++
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQ 114 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHH
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHH
Confidence 99998 69999998532 22346676665544
No 305
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.23 E-value=1.4e-11 Score=120.87 Aligned_cols=105 Identities=24% Similarity=0.337 Sum_probs=80.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchH-----HHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETE-----ELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++.+++||||+++++++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 4788899999999999999986 56899999999754321 1122345889999999999999999999997654
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
.++||||+++|+|.+++.... .+++.....++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~ 120 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNK---RLKEATCKLYF 120 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHH
T ss_pred eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHH
Confidence 799999999999999998543 35666555544
No 306
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.23 E-value=1.6e-11 Score=120.91 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=86.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 437 (471)
++|...+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 5788999999999999999985 6799999999965432 13577899999999 999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+ +|+|.++++... ..+++..+.+|+.+
T Consensus 84 ~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~q 113 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQ 113 (330)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHH
T ss_pred EEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHH
Confidence 9999 999999998642 35788888777653
No 307
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.22 E-value=2.1e-11 Score=118.85 Aligned_cols=104 Identities=26% Similarity=0.444 Sum_probs=82.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
...|...+.||+|+||.||+|.. .+|+.||+|++..... .+.+.+|++++.+++||||+++++++...+..++|
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 35688889999999999999986 4599999999975432 24677899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... ..+++....+++.
T Consensus 103 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~ 132 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRN--KTLTEDEIATILQ 132 (314)
T ss_dssp EECCTTEEHHHHHHHHT--CCCCHHHHHHHHH
T ss_pred eecCCCCCHHHHHHhcC--CCCCHHHHHHHHH
Confidence 99999999999997422 2467777666654
No 308
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.22 E-value=1.1e-11 Score=128.93 Aligned_cols=106 Identities=22% Similarity=0.422 Sum_probs=86.5
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|.+.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 4688889999999999999986 479999999996432111 12356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++....+|+.
T Consensus 101 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~ 128 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK---RFSEHDAARIIK 128 (486)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EcCCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999997543 356666655543
No 309
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.22 E-value=1.8e-11 Score=120.51 Aligned_cols=105 Identities=26% Similarity=0.429 Sum_probs=79.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcE----EEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKV----FALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
.+|...+.||+|+||.||+|.. .++.. ||+|.++.... ....++|.+|++++++++|||||+++++|..+. .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 4688889999999999999985 44543 58888864331 223467889999999999999999999998754 7
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++|+||+++|+|.++++... ..+++..+++|+.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~ 124 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCV 124 (327)
T ss_dssp EEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHH
T ss_pred EEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHH
Confidence 89999999999999998643 2467777776654
No 310
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.22 E-value=2.1e-11 Score=117.89 Aligned_cols=106 Identities=22% Similarity=0.362 Sum_probs=83.8
Q ss_pred cccccceeecCCccccEEEEEeCC----CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe-CCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH-RKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~ 434 (471)
..|...+.||+|+||.||+|...+ +..+|+|.+..... ....+.+.+|++++++++||||++++++|.. .+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC--HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 467788999999999999998632 23689999976442 2335678899999999999999999999755 5577
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 135 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGL 135 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHH
Confidence 99999999999999998643 3456777666553
No 311
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.22 E-value=3.2e-11 Score=120.07 Aligned_cols=115 Identities=23% Similarity=0.317 Sum_probs=92.0
Q ss_pred cchhhhhhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-----CCCcc
Q 042931 349 RIVYEDLIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-----HRNIV 422 (471)
Q Consensus 349 ~~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv 422 (471)
.+++.+-....+.|.+.+.||+|+||.||+|.. .+++.||||++..... ..+.+..|++++.+++ |||||
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK----YTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH----HHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh----hhhhhHHHHHHHHHhcccCCCCCCee
Confidence 455555555667899999999999999999986 5789999999975432 2345667888888886 99999
Q ss_pred cEEEEEEeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 423 KLYGFCLHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 423 ~l~g~~~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++++++...+..++||||+ +|+|.+++..... ..+++....+|+.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~ 144 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCI 144 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHH
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHH
Confidence 9999999999999999999 9999999986432 2466666665543
No 312
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.21 E-value=1.4e-12 Score=138.64 Aligned_cols=57 Identities=16% Similarity=0.047 Sum_probs=28.2
Q ss_pred CCCCCCEEECCCCcCCCCCc-ccccCCCCCCEEeccCCcCcC-CCchhhhcCCCCCcccC
Q 042931 250 RLTNLNYMSLSRNMFGGLLP-QEIGNLKNLIELNVGSNSLIG-PIPSTLGLLTDLSYLDL 307 (471)
Q Consensus 250 ~l~~L~~L~L~~N~l~g~~p-~~l~~l~~L~~L~L~~N~l~g-~ip~~l~~l~~L~~L~l 307 (471)
.+++|+.|++++|.+++... ..+.++++|++|++++| +.. .++.....+++|+.|++
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L 345 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRV 345 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEE
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEE
Confidence 34556666666665443211 12345566666666655 221 12222234666676666
No 313
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.21 E-value=2.4e-11 Score=117.28 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=83.5
Q ss_pred cccccccce-eecCCccccEEEEEe---CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 358 ATEDFDIRY-CIGTGGYGSVYKAQL---PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 358 at~~f~~~~-~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
....|.+.. .||+|+||.||+|.. ..+..||||+++..... ....+++.+|++++++++||||+++++++ ..+.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 345677777 999999999999954 34788999999765322 23356788999999999999999999999 5677
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.++++... .+++....+++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 124 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH 124 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHH
Confidence 899999999999999998643 366766666554
No 314
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.21 E-value=7.2e-12 Score=123.94 Aligned_cols=108 Identities=22% Similarity=0.312 Sum_probs=87.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH-----HHHHHHHHHHHHHhccCCCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL-----AFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 432 (471)
.+.|...+.||+|+||.||+|.. .+++.||||+++....... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 35788999999999999999985 6789999999976432110 11235677999999999999999999999999
Q ss_pred eeeEEEeccCCC-ChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGG-SLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~G-sL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+.+| +|.+++.... .+++..+.+|+.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~ 137 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFR 137 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHH
T ss_pred EEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999999877 9999998653 367777766654
No 315
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.21 E-value=2.9e-11 Score=116.79 Aligned_cols=105 Identities=19% Similarity=0.308 Sum_probs=83.3
Q ss_pred ccccceeecCCccccEEEEEe-CCC---cEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee-e
Q 042931 361 DFDIRYCIGTGGYGSVYKAQL-PNG---KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM-F 435 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~-~~g---~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~ 435 (471)
.|...+.||+|+||.||+|.. .++ ..+|+|++..... ....+.|.+|++++++++|||||++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 455668999999999999975 333 3799999976442 23356788999999999999999999999876655 9
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+.+|+|.++++... ..+++..+.+|+.
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~ 131 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGL 131 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHH
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHH
Confidence 9999999999999998633 3456777766554
No 316
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.21 E-value=1.4e-11 Score=123.86 Aligned_cols=105 Identities=23% Similarity=0.407 Sum_probs=82.4
Q ss_pred ccccceeecCCccccEEEEEeC--CC--cEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe-CCeee
Q 042931 361 DFDIRYCIGTGGYGSVYKAQLP--NG--KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH-RKCMF 435 (471)
Q Consensus 361 ~f~~~~~lG~G~~g~vy~~~~~--~g--~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~ 435 (471)
.|...+.||+|+||.||+|... ++ ..||||.++.... ....++|.+|+.++++++|||||+++++|.. .+..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC--SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4667789999999999999752 32 4689999975432 1235678999999999999999999999865 45779
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.++++.... .+++..+.+++.
T Consensus 168 lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~ 199 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGL 199 (373)
T ss_dssp EEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHhhccc--CCCHHHHHHHHH
Confidence 99999999999999986432 456666665543
No 317
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.20 E-value=4e-11 Score=116.98 Aligned_cols=104 Identities=27% Similarity=0.499 Sum_probs=84.0
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
.+|...+.||+|+||.||+|... ..+|+|.++..... ....+.|.+|++++++++|||||++++++. .+..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 57888899999999999999853 35899988754322 233567899999999999999999999875 566799999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++|+|.++++... ..+++..+.+|+.
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 139 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE--TKFQMFQLIDIAR 139 (307)
T ss_dssp CCSSCBHHHHHHTSC--CCCCHHHHHHHHH
T ss_pred cCCCCcHHHHHHhcc--cCCCHHHHHHHHH
Confidence 999999999998543 3577777777664
No 318
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.20 E-value=3.2e-11 Score=118.99 Aligned_cols=101 Identities=23% Similarity=0.409 Sum_probs=83.8
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhc--cCCCCcccEEEEEEeCC----
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ--VLHRNIVKLYGFCLHRK---- 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~---- 432 (471)
.+.|...+.||+|+||.||+|.. +|+.||||++.... .+.+.+|.+++.. ++||||+++++++...+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 35788999999999999999987 58999999997543 2456678887776 79999999999998875
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..++||||+++|+|.+++++. .++|..+.+++.+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~ 147 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALS 147 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHH
T ss_pred eeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHH
Confidence 789999999999999999864 3677777776643
No 319
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.20 E-value=1.8e-11 Score=117.85 Aligned_cols=106 Identities=22% Similarity=0.422 Sum_probs=87.7
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 5788899999999999999986 478999999996543211 12356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||+++|+|.+++.... .+++..+.+|+.
T Consensus 101 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ 128 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK---RFSEHDAARIIK 128 (287)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EccCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999987533 367777766654
No 320
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.20 E-value=3.2e-11 Score=119.50 Aligned_cols=106 Identities=22% Similarity=0.387 Sum_probs=87.8
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC--CCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH--RNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~l 436 (471)
.+.|.+.+.||+|+||.||++...+++.||||++...... ....+.+.+|++++.+++| +|||++++++...+..++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc-hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 4568899999999999999998888999999999754322 2334678899999999987 999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||| +.+|+|.++++... .+++..+.+|+.
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~ 115 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWK 115 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHH
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 999 46789999998643 467776666654
No 321
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.20 E-value=3.1e-11 Score=120.24 Aligned_cols=116 Identities=19% Similarity=0.317 Sum_probs=92.4
Q ss_pred hhhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccch--------HHHHHHHHHHHHHHHHhccCCCCcc
Q 042931 351 VYEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSET--------EELAFIKSFRNEAQVLSQVLHRNIV 422 (471)
Q Consensus 351 ~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~~~~e~~~l~~l~H~niv 422 (471)
...++....+.|...+.||+|+||.||+|...+|..||||++..... ......+.+.+|++++.+++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 34667777889999999999999999999887899999999965321 1123346789999999999999999
Q ss_pred cEEEEEEeC-----CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 423 KLYGFCLHR-----KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 423 ~l~g~~~~~-----~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++++++... ...++||||++ |+|.+++.... ..+++..+.+|+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~ 141 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMY 141 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHH
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHH
Confidence 999999653 35799999998 68999988543 3567777766654
No 322
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.20 E-value=1.8e-11 Score=132.75 Aligned_cols=104 Identities=28% Similarity=0.436 Sum_probs=84.3
Q ss_pred cccccceeecCCccccEEEEEeC--CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe----
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP--NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC---- 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 433 (471)
+.|.+...||+|+||.||++... +|+.||||++..... ....+.|.+|++++.+++|||||++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD--AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC--HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC--HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 57899999999999999999864 689999999975432 2334678899999999999999999999987655
Q ss_pred -eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 434 -MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 -~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
.+|||||+++|+|.+++.. .++|..+++|+.+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~q 190 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLE 190 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHH
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHH
Confidence 6999999999999988764 4788888887654
No 323
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.19 E-value=2.4e-11 Score=130.59 Aligned_cols=100 Identities=26% Similarity=0.373 Sum_probs=81.0
Q ss_pred eeecCCccccEEEEEe---CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEeccC
Q 042931 366 YCIGTGGYGSVYKAQL---PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYEYME 442 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ey~~ 442 (471)
+.||+|+||.||+|.+ ..+..||||+++..... ....++|.+|++++.+++|||||+++++|. .+..++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-GGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 4799999999999965 34678999999764322 123467889999999999999999999996 456789999999
Q ss_pred CCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 443 GGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 443 ~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+|+|.++++... .++|..+.+|+.+
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~q 477 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQ 477 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHH
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHH
Confidence 999999998543 4778877776653
No 324
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.19 E-value=1.9e-11 Score=117.68 Aligned_cols=107 Identities=24% Similarity=0.397 Sum_probs=77.2
Q ss_pred cccccceeecCCccccEEEEEe--CCCc--EEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL--PNGK--VFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~--~~g~--~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
++|...+.||+|+||.||+|.. .+++ .||||+++..........+.+.+|++++.+++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 5788899999999999999975 2333 68999997653322334578889999999999999999999998654 78
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.+++.... ..+++..+.+++.
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 128 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAV 128 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHH
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHH
Confidence 9999999999999998642 3466776666554
No 325
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.19 E-value=4.2e-11 Score=117.77 Aligned_cols=100 Identities=26% Similarity=0.444 Sum_probs=79.7
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHh--ccCCCCcccEEEEEEeC----C
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLS--QVLHRNIVKLYGFCLHR----K 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~ 432 (471)
.++|.+.+.||+|+||.||+|... |+.||||++..... ..+.+|.+++. .++||||+++++++... .
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 357899999999999999999874 89999999965432 22334444444 45999999999999887 6
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++.. .+++..+.+|+.
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~ 141 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST----TLDAKSMLKLAY 141 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHH
T ss_pred ceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHH
Confidence 889999999999999999864 367777776654
No 326
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.19 E-value=4.1e-11 Score=114.91 Aligned_cols=107 Identities=27% Similarity=0.288 Sum_probs=84.7
Q ss_pred cccccccceeecCCccccEEEEEeCC----CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
..++|...+.||+|+||.||+|...+ +..||+|.+...... ...+.|.+|++++++++||||+++++++.+ +.
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH--HHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc--hHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 44678889999999999999997532 346999999765322 234678899999999999999999999864 55
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.++++... ..+++..+.+++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 120 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSL 120 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHH
T ss_pred CEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHH
Confidence 689999999999999998533 2466776666554
No 327
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.18 E-value=3.6e-11 Score=116.00 Aligned_cols=104 Identities=27% Similarity=0.521 Sum_probs=82.9
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEEe
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIYE 439 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 439 (471)
+.|...+.||+|+||.||+|... ..+|+|+++..... ....+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 46888899999999999999853 35999999765432 23456789999999999999999999976 4566899999
Q ss_pred ccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 440 YMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 440 y~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|+++|+|.++++... ..+++..+.+|+.
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 127 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIAR 127 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHH
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHH
Confidence 999999999997543 3577777777654
No 328
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.18 E-value=3.8e-11 Score=116.10 Aligned_cols=107 Identities=26% Similarity=0.364 Sum_probs=83.4
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
++|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 5788889999999999999986 47999999999754322 122356788999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||++ |+|.+++.... ...+++..+.+++.
T Consensus 82 e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~ 110 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASA-LTGIPLPLIKSYLF 110 (299)
T ss_dssp ECCS-EEHHHHHHHTT-TTCCCHHHHHHHHH
T ss_pred Eccc-CCHHHHHHhhh-ccCCCHHHHHHHHH
Confidence 9998 69999998643 23356666665543
No 329
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.18 E-value=4.9e-11 Score=120.54 Aligned_cols=105 Identities=22% Similarity=0.390 Sum_probs=86.6
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC--CCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL--HRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lV 437 (471)
..|.+.+.||+|+||.||++...+++.||||++...... ....+.+.+|++++.+++ |||||++++++...+..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc-HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 468999999999999999998877999999999754332 234567889999999996 59999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|| +.+|+|.++++... .+++..+.+|+.
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~ 162 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWK 162 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHH
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHH
Confidence 99 56889999998643 466666666543
No 330
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.18 E-value=1.9e-13 Score=145.28 Aligned_cols=184 Identities=16% Similarity=0.112 Sum_probs=119.9
Q ss_pred CCCCCCEEEcCCCCCCccCch-hccCCCCCCEEeccCCCCCC-cCCcccCCCCCCcEEEccc---------CCCCCCCCC
Q 042931 130 CFPNLENLTFQSFPLAGSIPP-EISALSKLQRLDLSSNRLTG-SIPSEIGNLRNLVYLNISK---------NILTGTVPS 198 (471)
Q Consensus 130 ~l~~L~~L~L~~n~l~g~ip~-~l~~L~~L~~L~Ls~N~l~g-~iP~~l~~L~~L~~L~L~~---------N~l~g~~p~ 198 (471)
.+++|+.|++++|.+.+.... .+.++++|++|++++| ++. .++.....+++|++|++.. +.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 568999999999987754333 3568899999999988 432 1222233578888888833 444432222
Q ss_pred ccC-CCCCcCEEEccCCCCCCCCccccc-CCCCCCEEeCC--C----Ccccc-----ccccccCCCCCCCEEECCCCcCC
Q 042931 199 TLG-SLTNLKNMGLSYNQLSGPLPQEIG-NLKNLMELDLG--T----NSLIG-----PIPSTLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 199 ~l~-~l~~L~~L~L~~N~l~g~~p~~l~-~l~~L~~L~Ls--~----N~l~g-----~ip~~l~~l~~L~~L~L~~N~l~ 265 (471)
.+. ++++|++|.++.|.+++..+..+. .+++|+.|+++ + |.++. .++..+..+++|+.|++++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 232 477888888877777765555554 47788888887 3 44441 2233356677888888866 555
Q ss_pred CCCcccccC-CCCCCEEeccCCcCcCCCchhh-hcCCCCCcccCCCCcCccc
Q 042931 266 GLLPQEIGN-LKNLIELNVGSNSLIGPIPSTL-GLLTDLSYLDLSCNQFSSS 315 (471)
Q Consensus 266 g~~p~~l~~-l~~L~~L~L~~N~l~g~ip~~l-~~l~~L~~L~l~~N~l~g~ 315 (471)
+..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|++++.
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 544444544 7778888888887765544444 5677888888888887543
No 331
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.18 E-value=2.6e-11 Score=118.99 Aligned_cols=109 Identities=24% Similarity=0.339 Sum_probs=87.0
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEE------
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCL------ 429 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~------ 429 (471)
....|.+.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++.++. |||||++++++.
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH---HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch---HHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 345788999999999999999986 5799999999865432 23467889999999996 999999999994
Q ss_pred --eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 430 --HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 430 --~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
.....++||||++ |+|.++++......+++|..+.+|+..
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~q 144 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQ 144 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHH
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHH
Confidence 3345789999996 799999986433446888888877653
No 332
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.18 E-value=2.3e-11 Score=131.60 Aligned_cols=109 Identities=17% Similarity=0.288 Sum_probs=87.4
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeee
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 435 (471)
...+|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 346899999999999999999986 56889999999764332222345677888899887 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++|+|.++++..+ .+++.....|+.
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ 449 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAA 449 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHH
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 9999999999999999643 356666655543
No 333
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.18 E-value=1.6e-11 Score=117.55 Aligned_cols=104 Identities=25% Similarity=0.414 Sum_probs=83.9
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-CeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR-KCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lV 437 (471)
.++|...+.||+|+||.||++.. .|+.||||+++... ..+.+.+|++++.+++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 45788899999999999999987 58899999997653 135688999999999999999999998664 468999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
|||+++|+|.+++.... ...+++..+.+++.
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ 124 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSL 124 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHH
Confidence 99999999999998532 22356666666554
No 334
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.17 E-value=4.2e-11 Score=116.14 Aligned_cols=108 Identities=18% Similarity=0.230 Sum_probs=84.0
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHH-HHHHHHHHHHHHHHhccCCCCcccEEEEEEe--CCeee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEE-LAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCMF 435 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 435 (471)
+.|.+.+.||+|+||.||++.. .++..||+|++....... ....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 5788999999999999999986 568999999997643221 1234678899999999999999999999954 45789
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+++| +.+++.... ...+++..+.+|+.
T Consensus 85 lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~ 116 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFC 116 (305)
T ss_dssp EEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHH
T ss_pred EEehhccCC-HHHHHHhCc-ccccCHHHHHHHHH
Confidence 999999987 777777532 23567777766654
No 335
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.17 E-value=8.3e-11 Score=126.81 Aligned_cols=107 Identities=25% Similarity=0.345 Sum_probs=86.7
Q ss_pred cccccccceeecCCccccEEEEEeCC----CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
....|.+.+.||+|+||.||+|.... +..||+|++..... ....+.|.+|+.++++++|||||++++++. .+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 34678889999999999999998632 45799999976432 233567889999999999999999999985 466
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.++++... ..++|..+++++.
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~ 498 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAY 498 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHH
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHH
Confidence 899999999999999998643 3477887776654
No 336
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.17 E-value=8.8e-12 Score=124.31 Aligned_cols=107 Identities=28% Similarity=0.442 Sum_probs=85.2
Q ss_pred ccccccceeecCCccccEEEEEe----CCCcEEEEEEccccchH-HHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSETE-ELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 432 (471)
..+|...+.||+|+||.||++.. .+|+.||||+++..... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999986 36899999999753211 011124566789999999 6999999999999999
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
..++||||+++|+|.++++... .+++.....++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~ 165 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYV 165 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHH
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHH
Confidence 9999999999999999998643 35666655544
No 337
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.17 E-value=5.7e-11 Score=114.20 Aligned_cols=110 Identities=18% Similarity=0.262 Sum_probs=84.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
.++|...+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.++...++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-HHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46788999999999999999986 679999999997653222 2233444555568889999999999999999999999
Q ss_pred EeccCCCChhhhhhcC-CCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNN-EEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~-~~~~~l~w~~rl~ia~g 470 (471)
|||++ |+|.++++.. .....+++..+.+|+.+
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~q 117 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVS 117 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 99998 5888888742 22345788877776643
No 338
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.16 E-value=5.7e-11 Score=120.46 Aligned_cols=102 Identities=24% Similarity=0.442 Sum_probs=79.0
Q ss_pred cccccc-eeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHH-hccCCCCcccEEEEEEe----CC
Q 042931 360 EDFDIR-YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVL-SQVLHRNIVKLYGFCLH----RK 432 (471)
Q Consensus 360 ~~f~~~-~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~----~~ 432 (471)
++|... +.||+|+||.||++.. .+|+.||||+++.. ..+.+|++++ ...+|||||+++++|.. .+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 456555 6899999999999986 56899999999643 2345677776 45589999999999876 56
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..++||||+++|+|.++++... ...+++....+|+.+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~q 169 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKS 169 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHH
T ss_pred EEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHH
Confidence 7899999999999999998642 345777777776543
No 339
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.16 E-value=9.9e-11 Score=113.98 Aligned_cols=102 Identities=24% Similarity=0.288 Sum_probs=77.2
Q ss_pred cccccceeecCCccccEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEE---------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCL--------- 429 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~--------- 429 (471)
+.|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH---HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh---HHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 46888899999999999999874 589999999976542 33567889999999999999999999884
Q ss_pred -----eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 430 -----HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 430 -----~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+....++||||++ |+|.++++.. ++++....+++.
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~ 127 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMY 127 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHH
T ss_pred cccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHH
Confidence 3467899999998 6999999753 355665555543
No 340
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.15 E-value=5.2e-11 Score=117.54 Aligned_cols=112 Identities=19% Similarity=0.265 Sum_probs=86.8
Q ss_pred hhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHH-HhccCCCCcccEEEEEEeCCe
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQV-LSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~ 433 (471)
....++|...+.||+|+||.||+|.. .+|+.||||++....... ..+++..|..+ ++.++|||||++++++...+.
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~ 124 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGD 124 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSC
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCc
Confidence 34556888999999999999999986 679999999997643222 22345555554 788999999999999999999
Q ss_pred eeEEEeccCCCChhhhhhcC-CCCccCCHHHHHHHHhc
Q 042931 434 MFLIYEYMEGGSLFCNLHNN-EEAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~-~~~~~l~w~~rl~ia~g 470 (471)
.++||||+++ +|.++++.. .....+++..+.+|+.+
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~q 161 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVS 161 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHH
T ss_pred EEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 9999999985 999988742 12345778777766543
No 341
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.15 E-value=4.5e-12 Score=127.38 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=84.2
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHH---HHHhccCCCCcccEE-------
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEA---QVLSQVLHRNIVKLY------- 425 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~---~~l~~l~H~niv~l~------- 425 (471)
...+.|...+.||+|+||.||+|.. .+|+.||||++...........+.|.+|+ +.+++++|||||+++
T Consensus 70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 3456888999999999999999986 57999999999754322223356788999 566677899999998
Q ss_pred EEEEeCC-----------------eeeEEEeccCCCChhhhhhcCC----CCccCCHHHHHHHHhc
Q 042931 426 GFCLHRK-----------------CMFLIYEYMEGGSLFCNLHNNE----EAVELDWAKRVNIVKA 470 (471)
Q Consensus 426 g~~~~~~-----------------~~~lV~ey~~~GsL~~~L~~~~----~~~~l~w~~rl~ia~g 470 (471)
+++...+ ..++||||+ +|+|.++++... ....++|..+.+|+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~q 214 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 214 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHH
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHH
Confidence 6665543 278999999 689999998532 1234557777766543
No 342
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.15 E-value=1.4e-10 Score=113.72 Aligned_cols=88 Identities=19% Similarity=0.331 Sum_probs=77.1
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEe--CCee
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLH--RKCM 434 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~ 434 (471)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .+.+.+|++++.+++ ||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 36789999999999999999975 679999999997544 246778999999997 9999999999988 5678
Q ss_pred eEEEeccCCCChhhhhhc
Q 042931 435 FLIYEYMEGGSLFCNLHN 452 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~ 452 (471)
++||||+++|+|.++++.
T Consensus 109 ~lv~e~~~~~~l~~~~~~ 126 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT 126 (330)
T ss_dssp EEEEECCCCCCHHHHGGG
T ss_pred EEEEeccCchhHHHHHHh
Confidence 999999999999999864
No 343
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.14 E-value=5.8e-11 Score=116.83 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=85.7
Q ss_pred cccccc-eeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEeCCeeeE
Q 042931 360 EDFDIR-YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 360 ~~f~~~-~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~l 436 (471)
+.|... +.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|+.++.+++ ||||+++++++...+..++
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 345555 7899999999999986 469999999997643222 12356788999999984 6999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.+++... ....+++..+.+|+.
T Consensus 107 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ 138 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIK 138 (327)
T ss_dssp EEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHh-cccCCCHHHHHHHHH
Confidence 99999999999999753 234577777776654
No 344
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.14 E-value=2e-11 Score=119.95 Aligned_cols=104 Identities=23% Similarity=0.324 Sum_probs=81.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 438 (471)
+.|...+.||+|+||.||+|.. .+++.||+|++...... .....+.+|++++++++|||||++++++...+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 4688889999999999999986 47899999999754321 11224557999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 439 EYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
||++ |+|.+++..... .+++.....++
T Consensus 80 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~ 106 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCGN--IINMHNVKLFL 106 (324)
T ss_dssp ECCS-EEHHHHHHHTTT--CCCHHHHHHHH
T ss_pred cccc-cCHHHHHHhcCC--CCCHHHHHHHH
Confidence 9998 599999886432 45666555544
No 345
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.14 E-value=7.4e-11 Score=115.04 Aligned_cols=115 Identities=20% Similarity=0.375 Sum_probs=91.5
Q ss_pred chhhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC--CCCcccEEEE
Q 042931 350 IVYEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL--HRNIVKLYGF 427 (471)
Q Consensus 350 ~~~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~ 427 (471)
+.++.+....+.|.+.+.||+|+||.||++...+++.||||++...... ....+.+.+|++++.+++ |+||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 3444445556789999999999999999999878999999999754322 233567889999999997 4999999999
Q ss_pred EEeCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 428 CLHRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 428 ~~~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+...+..++||| +.+|+|.+++.... .+++..+.+|+.
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~ 134 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWK 134 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHH
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHH
Confidence 999999999999 56889999998643 467777666654
No 346
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.14 E-value=1e-10 Score=113.41 Aligned_cols=101 Identities=24% Similarity=0.443 Sum_probs=80.6
Q ss_pred cccccc-eeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHH-hccCCCCcccEEEEEEe----CC
Q 042931 360 EDFDIR-YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVL-SQVLHRNIVKLYGFCLH----RK 432 (471)
Q Consensus 360 ~~f~~~-~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~----~~ 432 (471)
++|... +.||+|+||.||++.. .+++.||+|+++.. +.+.+|++++ +..+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 456665 7899999999999986 57899999999653 2345677776 66699999999999987 67
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++... ...+++....+|+.
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ 124 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMK 124 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHH
T ss_pred eEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHH
Confidence 7899999999999999999643 23467777766654
No 347
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.13 E-value=4.1e-11 Score=118.85 Aligned_cols=96 Identities=23% Similarity=0.413 Sum_probs=73.3
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHH--HHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEE--LAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
..+.|...+.||+|+||.||+|.. .+|+.||||++....... ....+.+.+|++++.+++|||||++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 346788999999999999999986 468999999997543221 12234678899999999999999999999999999
Q ss_pred eEEEeccCCCChhhhhhcCC
Q 042931 435 FLIYEYMEGGSLFCNLHNNE 454 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~ 454 (471)
++||||+++ +|.+++....
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~ 106 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS 106 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC
T ss_pred EEEEEcCCC-CHHHHHHhcC
Confidence 999999986 8998888643
No 348
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.13 E-value=3.7e-11 Score=120.96 Aligned_cols=105 Identities=23% Similarity=0.333 Sum_probs=79.2
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC----
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR---- 431 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---- 431 (471)
.....|...+.||+|+||.||+|.. .+|..||||++..... ...+|++++++++|||||++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 4556899999999999999999975 6799999999965431 223699999999999999999999543
Q ss_pred ----------------------------------CeeeEEEeccCCCChhhhhhcC-CCCccCCHHHHHHHHh
Q 042931 432 ----------------------------------KCMFLIYEYMEGGSLFCNLHNN-EEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 ----------------------------------~~~~lV~ey~~~GsL~~~L~~~-~~~~~l~w~~rl~ia~ 469 (471)
...++||||++ |+|.+.++.. .....+++.....|+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~ 148 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIY 148 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 34789999998 5888887742 1233567766665543
No 349
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.13 E-value=1e-10 Score=119.86 Aligned_cols=106 Identities=23% Similarity=0.311 Sum_probs=85.9
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-----C
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR-----K 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 432 (471)
.++|.+.+.||+|+||.||+|.. .+|..||||++...... ....+.+.+|++++++++|||||++++++... +
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED-LIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcC-hHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 45799999999999999999986 56889999999754322 23456788999999999999999999999876 5
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||++ |+|.++++... .+++.....++.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~ 136 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILY 136 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHH
T ss_pred eEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHH
Confidence 6899999997 59999998643 466766665543
No 350
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.12 E-value=1.7e-11 Score=131.20 Aligned_cols=108 Identities=22% Similarity=0.290 Sum_probs=85.8
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe------CC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH------RK 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~ 432 (471)
++|.+.+.||+|+||.||+|.. .+|..||||++..... ....+.+.+|++++.+++|||||++++++.. .+
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~--~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS--PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC--HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 5788999999999999999986 5689999999976432 2335678899999999999999999999765 66
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++|+|.++++.......+++..+.+|+.
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~ 128 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHH
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHH
Confidence 7799999999999999999755444566655555543
No 351
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.11 E-value=2.6e-11 Score=119.20 Aligned_cols=105 Identities=20% Similarity=0.354 Sum_probs=80.2
Q ss_pred cccccceeecCCccccEEEEEe-CCCcE----EEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKV----FALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
++|...+.||+|+||.||+|.. .++.. ||+|.+...... ...+.+.+|+.++++++|||||+++++|. .+..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 4688889999999999999986 44543 888888543211 11245678999999999999999999986 5668
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||+++|+|.++++... ..+++..+.+|+.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~ 122 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGV 122 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHH
Confidence 89999999999999998643 2455555555443
No 352
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.11 E-value=9.9e-11 Score=120.71 Aligned_cols=105 Identities=22% Similarity=0.336 Sum_probs=74.9
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-----C
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR-----K 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 432 (471)
.+.|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++.+++|||||++++++... .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED-LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC-HHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 35788999999999999999975 57999999999654322 23356788999999999999999999999543 5
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
..++||||++ |+|.++++... .+++.....|+
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~ 162 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLL 162 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHH
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHH
Confidence 6899999985 69999998643 36666555544
No 353
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.11 E-value=9.3e-11 Score=117.13 Aligned_cols=110 Identities=16% Similarity=0.223 Sum_probs=83.7
Q ss_pred cccccccceeecCCccccEEEEEeCC------CcEEEEEEccccchHHHHH--------HHHHHHHHHHHhccCCCCccc
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSETEELAF--------IKSFRNEAQVLSQVLHRNIVK 423 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~~~------g~~vavK~l~~~~~~~~~~--------~~~~~~e~~~l~~l~H~niv~ 423 (471)
..++|.+.+.||+|+||.||+|.... +..||||++.......... ...+.+|+..+.+++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 44689999999999999999998644 4789999987654211111 123445666788999999999
Q ss_pred EEEEEEeC----CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 424 LYGFCLHR----KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 424 l~g~~~~~----~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+++++... ...+|||||+ +|+|.++++... ..++|..+.+|+.+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~q 160 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLR 160 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHH
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHH
Confidence 99999874 4579999999 999999998642 35788888887754
No 354
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.11 E-value=4.9e-12 Score=124.93 Aligned_cols=105 Identities=16% Similarity=0.243 Sum_probs=77.0
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchH-----HHHHHHHHHHHHHHHhccC---------CCCcccE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETE-----ELAFIKSFRNEAQVLSQVL---------HRNIVKL 424 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~-----~~~~~~~~~~e~~~l~~l~---------H~niv~l 424 (471)
.++|...+.||+|+||.||+|.. +|+.||||++...... .....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35788889999999999999987 7899999999754311 0112255777888877775 7777777
Q ss_pred EEEEE------------------------------eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 425 YGFCL------------------------------HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 425 ~g~~~------------------------------~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
.+.+. +.+..+|||||+++|++.+.+.+. .+++....+|+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----~~~~~~~~~i~ 167 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----LSSLATAKSIL 167 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----CCCHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----CCCHHHHHHHH
Confidence 77653 267889999999999888777542 34555555544
No 355
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.10 E-value=1.5e-10 Score=111.74 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=86.2
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 437 (471)
++|...+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|++++.++ +|+|++++++++.+....++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 4688899999999999999985 6799999999965432 23567789999998 799999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 438 YEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
|||+ +|+|.++++... .++++..+.+|+.+
T Consensus 85 ~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~q 114 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQ 114 (298)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHH
T ss_pred EEec-CCCHHHHHHHhc--cCCCHHHHHHHHHH
Confidence 9999 999999998643 24778877777653
No 356
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.10 E-value=1.5e-10 Score=114.63 Aligned_cols=104 Identities=23% Similarity=0.410 Sum_probs=84.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-----C
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR-----K 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 432 (471)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|++++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS--HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc--chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 46889999999999999999986 4689999999975432 23345778999999999999999999998764 6
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||++ |+|.+++... .+++..+.+++.
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~ 119 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIY 119 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHH
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHH
Confidence 7899999998 6999998863 366766666554
No 357
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.10 E-value=1.2e-10 Score=116.72 Aligned_cols=104 Identities=23% Similarity=0.303 Sum_probs=77.3
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC-----
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK----- 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 432 (471)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 45788899999999999999986 57999999999654322 234567889999999999999999999998753
Q ss_pred -eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 433 -CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 433 -~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
..++||||+ +++|.++++.. .+++.....++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~ 134 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLV 134 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHH
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHH
Confidence 459999999 88999999863 35555555444
No 358
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.10 E-value=7.5e-11 Score=116.93 Aligned_cols=107 Identities=19% Similarity=0.169 Sum_probs=79.7
Q ss_pred cccccceeecCCccccEEEEEeC----CCcEEEEEEccccchHHHH--------HHHHHHHHHHHHhccCCCCcccEEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSETEELA--------FIKSFRNEAQVLSQVLHRNIVKLYGF 427 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~g~ 427 (471)
++|...+.||+|+||.||+|... .+..+|+|+.......... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888999999999999999864 5788999999764321110 12346778889999999999999999
Q ss_pred EEe----CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 428 CLH----RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 428 ~~~----~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+.. ....++||||+ +|+|.+++.... .+++..+.+|+.+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~q 159 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIR 159 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHH
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHH
Confidence 988 67889999999 999999998643 5788888776653
No 359
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.10 E-value=9e-11 Score=115.48 Aligned_cols=102 Identities=24% Similarity=0.358 Sum_probs=77.0
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe-----CCe
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH-----RKC 433 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~ 433 (471)
.++|...+.||+|+||.||+|.. +++.||||++....... ...+.|+..+..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~----~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN----FINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH----HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh----HHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788899999999999999976 78999999997543211 112234444667899999999987653 235
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||+++|+|.++++... .+|..+.+|+.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~ 118 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAH 118 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHH
T ss_pred EEEEEecCCCCcHHHHHhhcc----cchhHHHHHHH
Confidence 689999999999999998653 36776666654
No 360
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.09 E-value=1.7e-10 Score=114.35 Aligned_cols=107 Identities=24% Similarity=0.439 Sum_probs=84.4
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC------
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR------ 431 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 431 (471)
...|...+.||+|+||.||+|.. .+|+.||||++....... .....+.+|++++.+++|||||++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 46799999999999999999986 679999999996543221 1234577899999999999999999999873
Q ss_pred --CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 --KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 --~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+..++||||+++ ++.+.+..... .+++..+.+|+.
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~ 131 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQ 131 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHH
T ss_pred CCceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHH
Confidence 468999999985 88888875432 367777666654
No 361
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.08 E-value=1.6e-10 Score=112.48 Aligned_cols=110 Identities=25% Similarity=0.371 Sum_probs=80.2
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHH--HHHHHHHHHHHHHHhcc---CCCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEE--LAFIKSFRNEAQVLSQV---LHRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~ 432 (471)
.+.|.+.+.||+|+||.||+|.. .+|+.||||++....... ......+.+|++++.++ +|||||+++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 46799999999999999999985 579999999996432110 01112344566665555 5999999999998755
Q ss_pred -----eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 433 -----CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 433 -----~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..++||||++ |+|.++++... ...+++..+.+|+.+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~q 128 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQ 128 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHH
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHH
Confidence 4789999997 59999998643 234778777776643
No 362
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.08 E-value=1.8e-10 Score=114.95 Aligned_cols=107 Identities=21% Similarity=0.281 Sum_probs=86.0
Q ss_pred hhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC---
Q 042931 356 IRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR--- 431 (471)
Q Consensus 356 ~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--- 431 (471)
......|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++.+++|||||++++++...
T Consensus 23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 100 (364)
T 3qyz_A 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE 100 (364)
T ss_dssp CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC--HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred ccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC--cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence 34456799999999999999999985 5788999999975432 23346788999999999999999999999764
Q ss_pred --CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 --KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 --~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
...++||||++ |+|.++++.. .+++..+.+|+.
T Consensus 101 ~~~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~ 135 (364)
T 3qyz_A 101 QMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLY 135 (364)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHH
T ss_pred ccceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHH
Confidence 36799999998 5999999853 366766666554
No 363
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.08 E-value=2.6e-10 Score=114.87 Aligned_cols=104 Identities=25% Similarity=0.416 Sum_probs=74.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEeCC--ee
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLHRK--CM 434 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~--~~ 434 (471)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.++.++. |||||++++++...+ ..
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 45788999999999999999985 57999999999654222 233466778999999997 999999999998644 68
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
++|||||+ |+|.++++.. .+++..+..++
T Consensus 87 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~ 115 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN----ILEPVHKQYVV 115 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT----CCCHHHHHHHH
T ss_pred EEEecccC-cCHHHHHHcC----CCCHHHHHHHH
Confidence 99999998 6899999863 35555555443
No 364
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=114.06 Aligned_cols=105 Identities=26% Similarity=0.452 Sum_probs=82.5
Q ss_pred cccccceeecCCccccEEEEEe-CCCcE----EEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKV----FALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM 434 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 434 (471)
.+|...+.||+|+||.||+|.. .++.. ||+|.+...... ...+.+.+|+.++++++|||||+++++|.... .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC--CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 5788999999999999999985 44543 578887543321 12457889999999999999999999998654 7
Q ss_pred eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++|+||+++|+|.++++.... .+++..+.+|+.
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~ 124 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCV 124 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHH
T ss_pred eEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHH
Confidence 899999999999999986432 466766666554
No 365
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.07 E-value=7.3e-11 Score=115.55 Aligned_cols=112 Identities=28% Similarity=0.435 Sum_probs=83.3
Q ss_pred hhhcccccccceeecCCccccEEEEEe--CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc---CCCCcccEEEEEE
Q 042931 355 LIRATEDFDIRYCIGTGGYGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV---LHRNIVKLYGFCL 429 (471)
Q Consensus 355 L~~at~~f~~~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~ 429 (471)
+..+.+.|.+.+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|+.+++++ +||||++++++|.
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~ 84 (326)
T 1blx_A 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84 (326)
T ss_dssp CCCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred ccCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeee
Confidence 345667899999999999999999986 468899999996543211 1112344566666555 8999999999997
Q ss_pred -----eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 430 -----HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 430 -----~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.....++||||++ |+|.++++.... ..+++..+.+++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~ 127 (326)
T 1blx_A 85 VSRTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMF 127 (326)
T ss_dssp EEECSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHH
T ss_pred ecccCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHH
Confidence 4567899999998 699999986432 3467777776654
No 366
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.06 E-value=3e-10 Score=112.25 Aligned_cols=103 Identities=22% Similarity=0.375 Sum_probs=77.8
Q ss_pred cccccc-eeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe----CCe
Q 042931 360 EDFDIR-YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH----RKC 433 (471)
Q Consensus 360 ~~f~~~-~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 433 (471)
++|.+. +.||+|+||.||+|.. .+|+.||||++..... ..+++ ...+..++||||+++++++.. ...
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~---~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEV---DHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHH---HHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHH---HHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 467774 4799999999999986 4699999999975421 11222 223566799999999999976 445
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
.++||||+++|+|.++++... ...+++..+.+|+.+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~q 136 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRD 136 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHH
T ss_pred EEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHH
Confidence 799999999999999999643 245777777776643
No 367
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.06 E-value=3.4e-10 Score=111.04 Aligned_cols=107 Identities=23% Similarity=0.228 Sum_probs=81.7
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHH-HHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQ-VLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
++|...+.||+|+||.||+|.. .+|+.||||++...... ...+++.+|.. +++.++||||+++++++...+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH--HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc--hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 5788889999999999999986 57999999999765322 22344555655 77888999999999999999999999
Q ss_pred EeccCCCChhhhhhcC--CCCccCCHHHHHHHHh
Q 042931 438 YEYMEGGSLFCNLHNN--EEAVELDWAKRVNIVK 469 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~--~~~~~l~w~~rl~ia~ 469 (471)
|||+++ +|.+++... .....+++..+.+|+.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~ 132 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITL 132 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHH
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHH
Confidence 999985 788877631 1233567776666654
No 368
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.06 E-value=6.4e-11 Score=117.71 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=82.2
Q ss_pred cccccceeecCCccccEEEEEeC---------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCccc-------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLP---------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVK------- 423 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~------- 423 (471)
++|.+.+.||+|+||.||+|... ++..||+|++... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 57889999999999999999864 3789999999754 24668999999999999998
Q ss_pred --------EEEEEEe-CCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 424 --------LYGFCLH-RKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 424 --------l~g~~~~-~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+++++.. .+..++||||+ +|+|.++++... ...+++..+.+|+.+
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~q 167 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACR 167 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHH
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHH
Confidence 6788876 67889999999 999999999642 345788888877654
No 369
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.06 E-value=5e-11 Score=116.15 Aligned_cols=109 Identities=16% Similarity=0.263 Sum_probs=80.1
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhcc----CCCCcccEEEEEEe
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQV----LHRNIVKLYGFCLH 430 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l----~H~niv~l~g~~~~ 430 (471)
.++|.+.+.||+|+||.||+|.. .+++.||||+++....... .....+.+|++++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 35788999999999999999986 5789999999976432211 1223456788888888 89999999999999
Q ss_pred CCeeeEEEec-cCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 431 RKCMFLIYEY-MEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 431 ~~~~~lV~ey-~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
.+..++|||| +++|+|.+++.... ++++..+.+++.+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~q 147 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQ 147 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHH
Confidence 9999999999 89999999998643 4777777776543
No 370
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.06 E-value=2.2e-10 Score=118.51 Aligned_cols=104 Identities=22% Similarity=0.273 Sum_probs=81.4
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-----
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR----- 431 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 431 (471)
..+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+++.+|+.++++++|||||++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccC-hHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 346799999999999999999975 56899999999764322 23456788999999999999999999999764
Q ss_pred -CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 432 -KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 432 -~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
...++|||||+++ +.+.++.. +++..+..++
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~~-----l~~~~~~~~~ 170 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQME-----LDHERMSYLL 170 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTSC-----CCHHHHHHHH
T ss_pred CCeEEEEEeCCCCC-HHHHHhhc-----CCHHHHHHHH
Confidence 3569999999864 66666532 5666555544
No 371
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.06 E-value=3.6e-10 Score=113.22 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=82.7
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC-----
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK----- 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 432 (471)
.+.|...+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCC-hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 46799999999999999999975 56899999999754322 233467889999999999999999999997754
Q ss_pred -eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 -CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 -~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++ +|.+.+.. .+++.....|+.
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~ 134 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLY 134 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHH
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHH
Confidence 67999999985 78888863 256665555443
No 372
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.06 E-value=2.6e-11 Score=118.43 Aligned_cols=108 Identities=24% Similarity=0.449 Sum_probs=85.7
Q ss_pred hcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeE
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 436 (471)
-..++|...+.||+|+||.||+|.... .+|+|+++...... ...+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 345678889999999999999998743 48999997543211 112456789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
||||+++|+|.++++... ..+++..+.+|+.
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ 137 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQ 137 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHH
T ss_pred EeecccCCcHHHHHHhcC--CCCCHHHHHHHHH
Confidence 999999999999998643 3456666666554
No 373
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.05 E-value=2.9e-10 Score=113.92 Aligned_cols=104 Identities=24% Similarity=0.320 Sum_probs=84.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCee---
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCM--- 434 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--- 434 (471)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.++++++|||||++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc-hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 35788889999999999999985 56999999999764322 23456788999999999999999999999876654
Q ss_pred ---eEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 435 ---FLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ---~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
++||||++ |+|.+.+.. .+++..+.+|+.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~ 151 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVY 151 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHH
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHH
Confidence 99999998 688888753 266766666554
No 374
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.05 E-value=1.8e-10 Score=114.46 Aligned_cols=109 Identities=19% Similarity=0.200 Sum_probs=69.0
Q ss_pred hhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe
Q 042931 355 LIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC 433 (471)
Q Consensus 355 L~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 433 (471)
.....++|.+.+.||+|+||.||+|.. .+|..||||++...... .+.+.+|++.+.+++|||||+++++|...+.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345567899999999999999999986 56899999998654321 1345567888899999999999999976443
Q ss_pred -------eeEEEeccCCCChhhhhhc-CCCCccCCHHHHHHHH
Q 042931 434 -------MFLIYEYMEGGSLFCNLHN-NEEAVELDWAKRVNIV 468 (471)
Q Consensus 434 -------~~lV~ey~~~GsL~~~L~~-~~~~~~l~w~~rl~ia 468 (471)
.++||||+++ ++.+.+.. ......+++.....++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~ 135 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL 135 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHH
Confidence 7899999987 55544442 1222345555544443
No 375
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.04 E-value=3.3e-10 Score=112.54 Aligned_cols=104 Identities=23% Similarity=0.306 Sum_probs=83.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe----
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC---- 433 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 433 (471)
...|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 35788889999999999999986 56999999999764322 2345678899999999999999999999987654
Q ss_pred --eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 434 --MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 434 --~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.++||||++ |+|.+++.. .+++....+|+.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~ 133 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVY 133 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHH
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHH
Confidence 499999998 688888753 266666666554
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.04 E-value=2.2e-09 Score=108.77 Aligned_cols=178 Identities=11% Similarity=0.089 Sum_probs=99.7
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
|.++++|+.+++.+|.+...-...|. ..+|+.+.|..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+
T Consensus 176 F~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~ 251 (401)
T 4fdw_A 176 FYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGIT 251 (401)
T ss_dssp TTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCS
T ss_pred hhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCcc
Confidence 55556666666665555432222333 456666666533 44323344556666666666554 33222233444 5666
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccc-----cccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEe
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLI-----GPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELN 282 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~-----g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~ 282 (471)
.+.+. +.++..-+..|.++++|+.+++.+|.+. ..-+..|.++++|+.+.+. +.++..-...|.++.+|+.+.
T Consensus 252 ~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~ 329 (401)
T 4fdw_A 252 TVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLT 329 (401)
T ss_dssp EEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEE
T ss_pred EEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEE
Confidence 66663 3344333456667777777777666543 2234466677777777777 335544455666777777777
Q ss_pred ccCCcCcCCCchhhhcCCCCCcccCCCCcCc
Q 042931 283 VGSNSLIGPIPSTLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 283 L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l~ 313 (471)
+..| ++..-+..|..+ +|+.+++++|.+.
T Consensus 330 lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 330 IPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp ECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred ECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 7544 444445566667 7777777777654
No 377
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.03 E-value=3.1e-10 Score=113.69 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=76.5
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeC-----
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHR----- 431 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 431 (471)
..+.|...+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++|||||++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 346788999999999999999975 67999999999754322 23346788999999999999999999999754
Q ss_pred -CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 -KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 -~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
...++|+||+ +++|.++++.. .+++..+..++.
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~ 139 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIY 139 (367)
T ss_dssp CCCCEEEEECC-CEECC-----C----CCCHHHHHHHHH
T ss_pred CCeEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHH
Confidence 5579999999 68999988752 366766665543
No 378
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.02 E-value=7.5e-10 Score=113.24 Aligned_cols=105 Identities=17% Similarity=0.287 Sum_probs=83.9
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc------CCCCcccEEEEEEeCC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV------LHRNIVKLYGFCLHRK 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~ 432 (471)
..|.+.+.||+|+||.||+|.. .+++.||||+++... ...+++.+|++++..+ +|+||+++++++...+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 4688899999999999999976 568999999997643 2234566777777666 6779999999999999
Q ss_pred eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 433 CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..++||||++ |+|.+++.... ...++|..+.+|+.+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~q 208 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHS 208 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHH
T ss_pred eEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHH
Confidence 9999999996 69999998643 234778777776643
No 379
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.01 E-value=4.7e-10 Score=109.99 Aligned_cols=104 Identities=18% Similarity=0.353 Sum_probs=84.3
Q ss_pred cccccceeecCCccccEEEEEe--CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCC------cccEEEEEEeC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL--PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN------IVKLYGFCLHR 431 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~ 431 (471)
+.|.+.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++.+++|++ ++++++++...
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 4788899999999999999975 468899999997543 22456778888888887665 99999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+..++||||+ +|+|.+++.... ..++++....+|+.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~ 125 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAY 125 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHH
T ss_pred CcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHH
Confidence 9999999999 889999998643 23567776666554
No 380
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.01 E-value=3.4e-10 Score=113.35 Aligned_cols=94 Identities=10% Similarity=0.009 Sum_probs=65.0
Q ss_pred cccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHH---HHhccCCCCcccEE-------E
Q 042931 358 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQ---VLSQVLHRNIVKLY-------G 426 (471)
Q Consensus 358 at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~---~l~~l~H~niv~l~-------g 426 (471)
....|...+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++ .+++ +|||||+++ +
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 345688999999999999999986 579999999998765433444566777854 5555 799988855 4
Q ss_pred EEEeC-----------------CeeeEEEeccCCCChhhhhhcC
Q 042931 427 FCLHR-----------------KCMFLIYEYMEGGSLFCNLHNN 453 (471)
Q Consensus 427 ~~~~~-----------------~~~~lV~ey~~~GsL~~~L~~~ 453 (471)
++... ...++||||++ |+|.++++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~ 181 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL 181 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence 44332 33799999999 8999999964
No 381
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.01 E-value=7.6e-10 Score=107.75 Aligned_cols=109 Identities=19% Similarity=0.214 Sum_probs=74.4
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeee
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 435 (471)
...++|...+.||+|+||.||+|.. .+|+.||||++....... ...+.+.++..++..++||||+++++++...+..+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 3456888899999999999999987 479999999997654322 22234444555788889999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 436 LIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 436 lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+||||+ ++.+........ ..+++..+.+++.
T Consensus 101 lv~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~ 131 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKRMQ--GPIPERILGKMTV 131 (318)
T ss_dssp EEECCC-SEEHHHHHHHHT--SCCCHHHHHHHHH
T ss_pred EEEecc-CCcHHHHHHHhc--cCCCHHHHHHHHH
Confidence 999999 444544444322 2456666665554
No 382
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.00 E-value=5.5e-10 Score=112.18 Aligned_cols=104 Identities=16% Similarity=0.263 Sum_probs=81.6
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC--------CCCcccEEEEEE-
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL--------HRNIVKLYGFCL- 429 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~- 429 (471)
+.|.+.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++.+++ |+|||++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC----cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 5788999999999999999975 568999999997543 22456788999998886 788999999998
Q ss_pred ---eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 430 ---HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 430 ---~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
.....++||||+ +|++.+++.... ...+++....+|+.
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQ 153 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHH
Confidence 456789999999 567777776432 23467777766654
No 383
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.00 E-value=1.7e-10 Score=117.69 Aligned_cols=102 Identities=23% Similarity=0.350 Sum_probs=76.6
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCC------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRK------ 432 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------ 432 (471)
..|...+.||+|+||.||+|.. .+|+.||||++.... +.+.+|++++++++|||||+++++|...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 4688889999999999999987 469999999996532 12336999999999999999999986522
Q ss_pred eeeEEEeccCCCChhhhhhcC-CCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEGGSLFCNLHNN-EEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~GsL~~~L~~~-~~~~~l~w~~rl~ia~ 469 (471)
..++||||+++ ++.+.++.. .....+++.....++.
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~ 163 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 163 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 36799999986 666666531 1234567766655543
No 384
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.99 E-value=2e-10 Score=116.41 Aligned_cols=103 Identities=25% Similarity=0.435 Sum_probs=73.6
Q ss_pred cccc-ceeecCCccccEEEEEeC---CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe--CCee
Q 042931 361 DFDI-RYCIGTGGYGSVYKAQLP---NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH--RKCM 434 (471)
Q Consensus 361 ~f~~-~~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 434 (471)
.|.. .+.||+|+||.||+|... ++..||||++...... +.+.+|++++++++|||||++++++.. ....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 3544 457999999999999864 5789999999765432 356789999999999999999999965 6688
Q ss_pred eEEEeccCCCChhhhhhcCC------CCccCCHHHHHHHHh
Q 042931 435 FLIYEYMEGGSLFCNLHNNE------EAVELDWAKRVNIVK 469 (471)
Q Consensus 435 ~lV~ey~~~GsL~~~L~~~~------~~~~l~w~~rl~ia~ 469 (471)
++||||++ |+|.+++.... ....+++....+|+.
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 135 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLY 135 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHH
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHH
Confidence 99999997 48888887321 223477777776654
No 385
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.99 E-value=8.6e-10 Score=112.97 Aligned_cols=86 Identities=16% Similarity=0.186 Sum_probs=71.6
Q ss_pred cccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEEEec
Q 042931 362 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIYEY 440 (471)
Q Consensus 362 f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ey 440 (471)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+..++||||
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34457899999999987666689999999996532 23466899999876 899999999999999999999999
Q ss_pred cCCCChhhhhhcCC
Q 042931 441 MEGGSLFCNLHNNE 454 (471)
Q Consensus 441 ~~~GsL~~~L~~~~ 454 (471)
++ |+|.+++....
T Consensus 91 ~~-gsL~~~l~~~~ 103 (434)
T 2rio_A 91 CN-LNLQDLVESKN 103 (434)
T ss_dssp CS-EEHHHHHHTC-
T ss_pred CC-CCHHHHHhccC
Confidence 96 69999998653
No 386
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.97 E-value=1e-09 Score=105.72 Aligned_cols=104 Identities=13% Similarity=0.222 Sum_probs=83.2
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE-EeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC-LHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~l 436 (471)
.++|...+.||+|+||.||+|.. .+|+.||||++...... +.+.+|++++.+++|+++++.+.++ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46789999999999999999985 67999999998654322 3577899999999998877777666 45677899
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+ +|+|.++++... ..+++..+.+|+.+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~q 113 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQ 113 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHH
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHH
Confidence 99999 999999998433 24777777776643
No 387
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.97 E-value=2.5e-10 Score=115.46 Aligned_cols=102 Identities=22% Similarity=0.272 Sum_probs=74.3
Q ss_pred cccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCe------
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKC------ 433 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------ 433 (471)
..|...+.||+|+||.||+|....+..+|+|++..... ...+|++++++++|||||+++++|...+.
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 46888999999999999999986666799998864321 12368999999999999999999976443
Q ss_pred eeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHH
Q 042931 434 MFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIV 468 (471)
Q Consensus 434 ~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia 468 (471)
.++||||++++.+....+.......+++.....++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 147 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 78999999875444333322222345665555443
No 388
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1.5e-10 Score=115.51 Aligned_cols=64 Identities=14% Similarity=0.320 Sum_probs=36.9
Q ss_pred CCCCCCEEECCCCcCCCCCcccc---cCCCCCCEEeccCCcCcCC----CchhhhcCCCCCcccCCCCcCc
Q 042931 250 RLTNLNYMSLSRNMFGGLLPQEI---GNLKNLIELNVGSNSLIGP----IPSTLGLLTDLSYLDLSCNQFS 313 (471)
Q Consensus 250 ~l~~L~~L~L~~N~l~g~~p~~l---~~l~~L~~L~L~~N~l~g~----ip~~l~~l~~L~~L~l~~N~l~ 313 (471)
.+++|+.|++.+|.+....+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|++++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 35666666666666543222222 2356677777777766542 3333445667777777777665
No 389
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.95 E-value=9e-10 Score=109.84 Aligned_cols=104 Identities=19% Similarity=0.322 Sum_probs=83.3
Q ss_pred cccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-----------CCCcccEEEE
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-----------HRNIVKLYGF 427 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~ 427 (471)
..|.+.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++.+++ |+||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc----chhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 5788899999999999999985 6789999999975432 2356778888888776 8999999999
Q ss_pred EEeCC----eeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 428 CLHRK----CMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 428 ~~~~~----~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
+...+ ..++||||+ +|+|.+++..... ..+++....+|+.
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISK 138 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHH
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHH
Confidence 98754 789999999 8999999986432 3367776666654
No 390
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.94 E-value=1.2e-09 Score=104.97 Aligned_cols=104 Identities=13% Similarity=0.213 Sum_probs=80.1
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEE-EeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFC-LHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~l 436 (471)
.+.|.+.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++++.+++|++++..++++ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 46789999999999999999985 6789999998755332 23567899999999998887777776 45677899
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+ +|+|.++++... .++++..+.+|+.+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~q 113 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQ 113 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHH
T ss_pred EEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHH
Confidence 99999 999999998533 24778777776643
No 391
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.93 E-value=1e-09 Score=112.36 Aligned_cols=89 Identities=16% Similarity=0.242 Sum_probs=74.0
Q ss_pred ccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV 437 (471)
...|...+.||+|+||.||.....+|+.||||++..... +.+.+|++++.++ +|||||++++++.+.+..++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 346888899999999996655556899999999975432 1245789999998 899999999999999999999
Q ss_pred EeccCCCChhhhhhcCC
Q 042931 438 YEYMEGGSLFCNLHNNE 454 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~~~ 454 (471)
|||++ |+|.+++....
T Consensus 97 ~E~~~-g~L~~~l~~~~ 112 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD 112 (432)
T ss_dssp EECCS-EEHHHHHHSSS
T ss_pred EECCC-CCHHHHHHhcC
Confidence 99997 69999998654
No 392
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=2.8e-10 Score=113.59 Aligned_cols=179 Identities=21% Similarity=0.211 Sum_probs=123.3
Q ss_pred cCCCCCCCEEEcCCCCC---------CccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCC
Q 042931 128 FSCFPNLENLTFQSFPL---------AGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPS 198 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l---------~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~ 198 (471)
+..+++|+.|.+.++.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..+.++.....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHH
Confidence 44678999998876533 2346667788999999999988421 3444 43 89999999999887643333
Q ss_pred ccC--CCCCcCEEEccC--CCCCCC-----Ccccc--cCCCCCCEEeCCCCcccccccccc---CCCCCCCEEECCCCcC
Q 042931 199 TLG--SLTNLKNMGLSY--NQLSGP-----LPQEI--GNLKNLMELDLGTNSLIGPIPSTL---GRLTNLNYMSLSRNMF 264 (471)
Q Consensus 199 ~l~--~l~~L~~L~L~~--N~l~g~-----~p~~l--~~l~~L~~L~Ls~N~l~g~ip~~l---~~l~~L~~L~L~~N~l 264 (471)
.+. .+++|+.|+|+. |...|. +...+ ..+++|++|+|.+|.+....+..+ ..+++|+.|+|+.|.+
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 343 789999999863 222221 11122 357899999999999876544433 3578999999999998
Q ss_pred CCC----CcccccCCCCCCEEeccCCcCcCCCchhhhc-CCCCCcccCCCCc
Q 042931 265 GGL----LPQEIGNLKNLIELNVGSNSLIGPIPSTLGL-LTDLSYLDLSCNQ 311 (471)
Q Consensus 265 ~g~----~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~-l~~L~~L~l~~N~ 311 (471)
++. ++..+.++++|+.|++++|.++...-..+.. + ...++++.|+
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 763 3444456799999999999876443333332 2 3557777776
No 393
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.92 E-value=2.2e-09 Score=107.80 Aligned_cols=108 Identities=22% Similarity=0.345 Sum_probs=84.6
Q ss_pred hcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CC-----CcccEEEEEE
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HR-----NIVKLYGFCL 429 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~ 429 (471)
...++|.+.+.||+|+||.||+|.. .+++.||||+++... ...+++.+|++++..++ |+ +||++++++.
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 3457899999999999999999986 468899999997543 22355667777777764 44 4999999999
Q ss_pred eCCeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 430 HRKCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 430 ~~~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
..+..++||||++ |+|.++++... ...+++..+.+|+.+
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~q 165 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQ 165 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHH
T ss_pred cCCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHH
Confidence 9999999999996 59999998643 234777777766543
No 394
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.90 E-value=3.3e-10 Score=110.99 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=84.3
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHH---HHHHHHHHHHHHHhccC--CCCcccEEEEEEeCC
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEEL---AFIKSFRNEAQVLSQVL--HRNIVKLYGFCLHRK 432 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~ 432 (471)
...|...+.||+|+||.||+|.. .+++.||||++........ ...+.+.+|++++.+++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 35788899999999999999985 5789999999965432110 01234567899999986 599999999999999
Q ss_pred eeeEEEeccCC-CChhhhhhcCCCCccCCHHHHHHHHh
Q 042931 433 CMFLIYEYMEG-GSLFCNLHNNEEAVELDWAKRVNIVK 469 (471)
Q Consensus 433 ~~~lV~ey~~~-GsL~~~L~~~~~~~~l~w~~rl~ia~ 469 (471)
..++||||+.+ |+|.+++.... .+++....+|+.
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~ 156 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG---ALQEELARSFFW 156 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHH
T ss_pred cEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHH
Confidence 99999999986 89999998632 356666665543
No 395
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.90 E-value=1.2e-08 Score=103.33 Aligned_cols=172 Identities=14% Similarity=0.096 Sum_probs=96.6
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcC
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLK 207 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 207 (471)
|.+. +|+.+.+..+ +...-...|.+ .+|+.+++.. .++..-+..|.++++|+.+++..|.++. +|.......+|+
T Consensus 132 F~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~ 206 (401)
T 4fdw_A 132 FRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIE 206 (401)
T ss_dssp TTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCS
T ss_pred cccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccC
Confidence 5553 5777776654 43322334544 3577777764 4543334556677777777777777663 333332356777
Q ss_pred EEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCc
Q 042931 208 NMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNS 287 (471)
Q Consensus 208 ~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~ 287 (471)
.+.+..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+. +.++..-+..|.++++|+.+++.+|.
T Consensus 207 ~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 207 EVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGST 282 (401)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSC
T ss_pred EEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCcc
Confidence 7777643 44334455666777777777654 33222334444 566666663 33443344556666666666666655
Q ss_pred Cc-----CCCchhhhcCCCCCcccCC
Q 042931 288 LI-----GPIPSTLGLLTDLSYLDLS 308 (471)
Q Consensus 288 l~-----g~ip~~l~~l~~L~~L~l~ 308 (471)
+. ...+..|..+++|+.+++.
T Consensus 283 ~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 283 FNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp CCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred ccCCcccEECHHHhhCCccCCeEEeC
Confidence 43 2233456666666666665
No 396
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.88 E-value=2.8e-09 Score=110.64 Aligned_cols=104 Identities=15% Similarity=0.225 Sum_probs=83.0
Q ss_pred ccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC-CCcccEEEEEEeCCeeeE
Q 042931 359 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH-RNIVKLYGFCLHRKCMFL 436 (471)
Q Consensus 359 t~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~l 436 (471)
.+.|.+.+.||+|+||.||+|.. .++..||||++...... +++.+|++++..++| ++++.+..++...+..+|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 35788999999999999999985 67999999998654322 346789999999987 566666677777888999
Q ss_pred EEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 437 IYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 437 V~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
||||+ +|+|.++++... ..++|..+++|+.+
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~q 111 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQ 111 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHH
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHH
Confidence 99999 999999998532 24788888877654
No 397
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.88 E-value=3e-09 Score=104.99 Aligned_cols=105 Identities=20% Similarity=0.305 Sum_probs=83.3
Q ss_pred cccccceeecCCccccEEEEEe-CCC-cEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCC------cccEEEEEEeC
Q 042931 360 EDFDIRYCIGTGGYGSVYKAQL-PNG-KVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN------IVKLYGFCLHR 431 (471)
Q Consensus 360 ~~f~~~~~lG~G~~g~vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~ 431 (471)
+.|.+.+.||+|+||.||+|.. .++ ..||+|+++... ...+.+.+|++++.+++|++ ++.+.+++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 5788999999999999999986 344 789999997543 22356778999999888776 99999999999
Q ss_pred CeeeEEEeccCCCChhhhhhcCCCCccCCHHHHHHHHhc
Q 042931 432 KCMFLIYEYMEGGSLFCNLHNNEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~~L~~~~~~~~l~w~~rl~ia~g 470 (471)
+..++||||+ +|++.+++.... ..++++..+.+|+..
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~q 131 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQ 131 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHH
T ss_pred CeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHH
Confidence 9999999999 667888877542 235777777766543
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.86 E-value=8.6e-12 Score=118.84 Aligned_cols=19 Identities=5% Similarity=-0.303 Sum_probs=13.2
Q ss_pred CCCcccceeeCCCC-CEEEE
Q 042931 90 DHCKWIGFTCNSAG-SIIGL 108 (471)
Q Consensus 90 ~~C~w~gv~C~~~~-~v~~l 108 (471)
..|+|.|+.|+..+ +|+.+
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~ 95 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISII 95 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCE
T ss_pred HHHhcCcEEECCCCCEEEEE
Confidence 36899999998654 44333
No 399
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.85 E-value=2.7e-09 Score=112.29 Aligned_cols=89 Identities=16% Similarity=0.078 Sum_probs=65.4
Q ss_pred ccceeecCCccccEEEEEeCCCcEEEEEEccccch-----HHHHHHHHHHHHHHHHhccCCCCcccEEEEEEeCCeeeEE
Q 042931 363 DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSET-----EELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 363 ~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-----~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
...+.||+|+||.||+|.. .+..+|+|+...... ......+.|.+|++++++++|||||++..++...+..+||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 577889988754321 1122346789999999999999999777778788888999
Q ss_pred EeccCCCChhhhhhc
Q 042931 438 YEYMEGGSLFCNLHN 452 (471)
Q Consensus 438 ~ey~~~GsL~~~L~~ 452 (471)
|||+++|+|.++++.
T Consensus 418 mE~~~ggsL~~~l~~ 432 (540)
T 3en9_A 418 MSYINGKLAKDVIED 432 (540)
T ss_dssp EECCCSEEHHHHSTT
T ss_pred EECCCCCCHHHHHHH
Confidence 999999999999986
No 400
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.73 E-value=1.3e-08 Score=98.14 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=71.4
Q ss_pred hhhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHH---------------HHHHHHHHHHHHHhcc
Q 042931 352 YEDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEEL---------------AFIKSFRNEAQVLSQV 416 (471)
Q Consensus 352 ~~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~---------------~~~~~~~~e~~~l~~l 416 (471)
..++......|...+.||+|+||.||+|...+|+.||+|.++....... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3445555566777899999999999999887799999999975322110 1345788999999999
Q ss_pred CCCCcccEEEEEEeCCeeeEEEeccCCCChhhhhh
Q 042931 417 LHRNIVKLYGFCLHRKCMFLIYEYMEGGSLFCNLH 451 (471)
Q Consensus 417 ~H~niv~l~g~~~~~~~~~lV~ey~~~GsL~~~L~ 451 (471)
+ | +++.+++. .+..++||||+++|+|.+ +.
T Consensus 162 ~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~ 191 (282)
T 1zar_A 162 Q--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR 191 (282)
T ss_dssp T--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC
T ss_pred c--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc
Confidence 8 4 66666554 356699999999999998 53
No 401
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.55 E-value=1.2e-07 Score=100.20 Aligned_cols=87 Identities=16% Similarity=0.058 Sum_probs=63.4
Q ss_pred ecCCccccEEEEE-eCCCcEEEEEEccccc-------hHHHHHHHHHHHHHHHHhcc-CCCCcccEEEEEEeCCeeeEEE
Q 042931 368 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-------TEELAFIKSFRNEAQVLSQV-LHRNIVKLYGFCLHRKCMFLIY 438 (471)
Q Consensus 368 lG~G~~g~vy~~~-~~~g~~vavK~l~~~~-------~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 438 (471)
.+.|+.|..+++. +--|+.+|||++.... .......++|.+|+++|+++ .|+||+++++|+.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4555565555543 3358899999996431 11223456799999999999 7999999999999999999999
Q ss_pred eccCCCChhhhhhcCC
Q 042931 439 EYMEGGSLFCNLHNNE 454 (471)
Q Consensus 439 ey~~~GsL~~~L~~~~ 454 (471)
||++||+|.+.|.+.+
T Consensus 322 Eyv~G~~L~d~i~~~~ 337 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE 337 (569)
T ss_dssp ECCCSEEHHHHHHTTC
T ss_pred ecCCCCcHHHHHHhCC
Confidence 9999999999999654
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=5e-09 Score=99.68 Aligned_cols=79 Identities=29% Similarity=0.392 Sum_probs=43.9
Q ss_pred CCCCCCEEeCCCCcccc--ccccccCCCCCCCEEECCCCcCCCCCcccccCCC--CCCEEeccCCcCcCCCch-------
Q 042931 226 NLKNLMELDLGTNSLIG--PIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLK--NLIELNVGSNSLIGPIPS------- 294 (471)
Q Consensus 226 ~l~~L~~L~Ls~N~l~g--~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~--~L~~L~L~~N~l~g~ip~------- 294 (471)
++++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555555 3444455556666666666666543 2233333 666666666666665542
Q ss_pred hhhcCCCCCccc
Q 042931 295 TLGLLTDLSYLD 306 (471)
Q Consensus 295 ~l~~l~~L~~L~ 306 (471)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 355667777665
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=2.7e-08 Score=89.49 Aligned_cols=66 Identities=12% Similarity=0.250 Sum_probs=32.4
Q ss_pred cCCCCCCCEEEcCCC-CCCcc----CchhccCCCCCCEEeccCCCCCCc----CCcccCCCCCCcEEEcccCCCC
Q 042931 128 FSCFPNLENLTFQSF-PLAGS----IPPEISALSKLQRLDLSSNRLTGS----IPSEIGNLRNLVYLNISKNILT 193 (471)
Q Consensus 128 l~~l~~L~~L~L~~n-~l~g~----ip~~l~~L~~L~~L~Ls~N~l~g~----iP~~l~~L~~L~~L~L~~N~l~ 193 (471)
+...+.|++|+|++| .+... +...+...++|++|+|++|.++.. +...+...++|++|+|++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 344556666666666 55421 233344455566666666655421 2222333345555555555544
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=2.8e-08 Score=89.41 Aligned_cols=69 Identities=12% Similarity=0.101 Sum_probs=37.6
Q ss_pred chhccCCCCCCEEeccCC-CCCCc----CCcccCCCCCCcEEEcccCCCCCC----CCCccCCCCCcCEEEccCCCCC
Q 042931 149 PPEISALSKLQRLDLSSN-RLTGS----IPSEIGNLRNLVYLNISKNILTGT----VPSTLGSLTNLKNMGLSYNQLS 217 (471)
Q Consensus 149 p~~l~~L~~L~~L~Ls~N-~l~g~----iP~~l~~L~~L~~L~L~~N~l~g~----~p~~l~~l~~L~~L~L~~N~l~ 217 (471)
...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+.
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 344556677777777777 66531 233445556666666666666421 1222333345555555555544
No 405
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.31 E-value=3e-07 Score=93.32 Aligned_cols=115 Identities=16% Similarity=0.092 Sum_probs=74.8
Q ss_pred hhhcccccccceeecCCccccEEEEEe-CCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC-CCcc----------
Q 042931 355 LIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH-RNIV---------- 422 (471)
Q Consensus 355 L~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv---------- 422 (471)
+...+..|...+.||+|+||.||+|.. .+|+.||||++...........+.|.+|+.++..++| +|..
T Consensus 73 ~~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~ 152 (413)
T 3dzo_A 73 LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152 (413)
T ss_dssp SSSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCC
T ss_pred CCCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhccccc
Confidence 344556788889999999999999985 6799999999985443333335678899999999987 2211
Q ss_pred cEE-----------EEEEe-----CCeeeEEEeccCCCChhhhhhc----CCCCccCCHHHHHHHHhc
Q 042931 423 KLY-----------GFCLH-----RKCMFLIYEYMEGGSLFCNLHN----NEEAVELDWAKRVNIVKA 470 (471)
Q Consensus 423 ~l~-----------g~~~~-----~~~~~lV~ey~~~GsL~~~L~~----~~~~~~l~w~~rl~ia~g 470 (471)
.+. .++.. ....+++|+++ +|+|.+++.. .....+++|..++.|+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~q 219 (413)
T 3dzo_A 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 219 (413)
T ss_dssp CCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHH
T ss_pred chhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHH
Confidence 111 11111 12345666665 6799998852 223456788888877543
No 406
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.20 E-value=1.5e-06 Score=82.31 Aligned_cols=94 Identities=18% Similarity=0.138 Sum_probs=63.4
Q ss_pred hhhhcccccccceeecCCccccEEEEEe-CCCcE--EEEEEccccchH---------------------HHHHHHHHHHH
Q 042931 354 DLIRATEDFDIRYCIGTGGYGSVYKAQL-PNGKV--FALKKLHTSETE---------------------ELAFIKSFRNE 409 (471)
Q Consensus 354 dL~~at~~f~~~~~lG~G~~g~vy~~~~-~~g~~--vavK~l~~~~~~---------------------~~~~~~~~~~e 409 (471)
.+...-.-|.+...||+|+||.||+|.. .+|+. ||||+++..... .......+.+|
T Consensus 41 ~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 120 (258)
T 1zth_A 41 KLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKE 120 (258)
T ss_dssp HHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHH
T ss_pred HHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHH
Confidence 3333333456778999999999999987 78988 999997543211 01122367889
Q ss_pred HHHHhccCCCCc--ccEEEEEEeCCeeeEEEeccCC-C----Chhhhhh
Q 042931 410 AQVLSQVLHRNI--VKLYGFCLHRKCMFLIYEYMEG-G----SLFCNLH 451 (471)
Q Consensus 410 ~~~l~~l~H~ni--v~l~g~~~~~~~~~lV~ey~~~-G----sL~~~L~ 451 (471)
++.+.+++|+++ ..++++ +..+|||||+.+ | +|.++..
T Consensus 121 ~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~ 165 (258)
T 1zth_A 121 FRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR 165 (258)
T ss_dssp HHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG
T ss_pred HHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh
Confidence 999999988864 333332 356899999952 5 5655543
No 407
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.84 E-value=2.4e-05 Score=78.15 Aligned_cols=97 Identities=8% Similarity=0.022 Sum_probs=62.7
Q ss_pred hhhhhcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchH----------------HH--HHHH-HHHHHHHHH
Q 042931 353 EDLIRATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETE----------------EL--AFIK-SFRNEAQVL 413 (471)
Q Consensus 353 ~dL~~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~----------------~~--~~~~-~~~~e~~~l 413 (471)
..+...-.-|.+...||+|+||.||+|..++|+.||||+++..... .. ...+ ...+|...|
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 3444444458889999999999999999888999999987532110 00 0011 123566777
Q ss_pred hccCCCCcccEEEEEEeCCeeeEEEeccCCCChhhhhh
Q 042931 414 SQVLHRNIVKLYGFCLHRKCMFLIYEYMEGGSLFCNLH 451 (471)
Q Consensus 414 ~~l~H~niv~l~g~~~~~~~~~lV~ey~~~GsL~~~L~ 451 (471)
.++.+.++....-+.. ...+|||||+++++|.++..
T Consensus 168 ~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~ 203 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS 203 (397)
T ss_dssp HHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC
T ss_pred HHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc
Confidence 7776555432222222 23479999999999876644
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.74 E-value=0.0002 Score=71.78 Aligned_cols=174 Identities=15% Similarity=0.086 Sum_probs=92.0
Q ss_pred cCCCCCCCEEEcCCCCCCccCchhccCCCCCCEEeccCCCCCCcCCcccCCCC----------------------CCcEE
Q 042931 128 FSCFPNLENLTFQSFPLAGSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLR----------------------NLVYL 185 (471)
Q Consensus 128 l~~l~~L~~L~L~~n~l~g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~----------------------~L~~L 185 (471)
|.++++|+.+.+.++- ...-...|.++++|+.+++..| ++..-...+.++. +|+.+
T Consensus 158 F~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i 235 (394)
T 4fs7_A 158 FATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNI 235 (394)
T ss_dssp TTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEE
T ss_pred hcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceE
Confidence 6666677777765432 2112234555666666666544 2211122233333 44444
Q ss_pred EcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCC
Q 042931 186 NISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFG 265 (471)
Q Consensus 186 ~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~ 265 (471)
.+..+ ++..-...+.++.+|+.+.+..+... .....+.++..++.+....+.+ ....+..+.+|+.+.+..+ ++
T Consensus 236 ~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~ 309 (394)
T 4fs7_A 236 IIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK 309 (394)
T ss_dssp EECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC
T ss_pred EECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc
Confidence 44322 11112234667778888888766432 3344566666777666655432 1234566677777776543 33
Q ss_pred CCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCC
Q 042931 266 GLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCN 310 (471)
Q Consensus 266 g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N 310 (471)
..-...|.++.+|+.+++..+ ++..-...|.++.+|+.+++..|
T Consensus 310 ~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 310 FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 333445666777777777533 43333455666777777766544
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=1.3e-05 Score=71.01 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=16.3
Q ss_pred CCCEEeccCCCCCCcCCcccCCCCCCcEEEcccC
Q 042931 157 KLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKN 190 (471)
Q Consensus 157 ~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N 190 (471)
+|+.||++++.++..--..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555544322223444555555555554
No 410
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.49 E-value=0.00076 Score=67.46 Aligned_cols=154 Identities=12% Similarity=0.050 Sum_probs=90.2
Q ss_pred hhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCC--------------
Q 042931 150 PEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQ-------------- 215 (471)
Q Consensus 150 ~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~-------------- 215 (471)
..|.++++|+.+.+.++. ...-...|.++.+|+.+++..| ++..-...+.++..|+.+.+..+.
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~ 233 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVK 233 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCC
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCc
Confidence 356777888888887653 2222345667788888887665 222223345555555555443321
Q ss_pred -------CCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCCcC
Q 042931 216 -------LSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSL 288 (471)
Q Consensus 216 -------l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l 288 (471)
++..-...+.++.+|+.+.+..+... .-...+..+..++.+....+.+. ...+..+.+|+.+.+..+ +
T Consensus 234 ~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i 308 (394)
T 4fs7_A 234 NIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-V 308 (394)
T ss_dssp EEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-C
T ss_pred eEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-c
Confidence 11011224556677777777666432 33456677777887777655432 234667778888887654 4
Q ss_pred cCCCchhhhcCCCCCcccCCCC
Q 042931 289 IGPIPSTLGLLTDLSYLDLSCN 310 (471)
Q Consensus 289 ~g~ip~~l~~l~~L~~L~l~~N 310 (471)
...-...|..+.+|+.+++..+
T Consensus 309 ~~I~~~aF~~c~~L~~i~lp~~ 330 (394)
T 4fs7_A 309 KFIGEEAFESCTSLVSIDLPYL 330 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT
T ss_pred ceechhhhcCCCCCCEEEeCCc
Confidence 4333456777788888877543
No 411
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.49 E-value=2.8e-05 Score=68.80 Aligned_cols=84 Identities=13% Similarity=0.201 Sum_probs=54.1
Q ss_pred CCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCC-CCCCCcccccCC----CCCCEEeCCCCc-cccccccccCCCCC
Q 042931 180 RNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQ-LSGPLPQEIGNL----KNLMELDLGTNS-LIGPIPSTLGRLTN 253 (471)
Q Consensus 180 ~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~-l~g~~p~~l~~l----~~L~~L~Ls~N~-l~g~ip~~l~~l~~ 253 (471)
.+|+.||++++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 478999999988775544557788888888888884 553322334443 357777777764 54332234556666
Q ss_pred CCEEECCCCc
Q 042931 254 LNYMSLSRNM 263 (471)
Q Consensus 254 L~~L~L~~N~ 263 (471)
|+.|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777666653
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.41 E-value=0.0026 Score=63.58 Aligned_cols=108 Identities=13% Similarity=0.158 Sum_probs=56.8
Q ss_pred cCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCC
Q 042931 200 LGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLI 279 (471)
Q Consensus 200 l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~ 279 (471)
|.++.+|+.+.+..+..+ .-...+.++++|+.+.+. +.++..-...|.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 445556666665444321 223345556666666664 2333222345566666666666543 3323344566666666
Q ss_pred EEeccCCcCcCCCchhhhcCCCCCcccCCCCc
Q 042931 280 ELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQ 311 (471)
Q Consensus 280 ~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~ 311 (471)
.+.+..+ ++..-...|.++++|+.+++.+|.
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 6666533 333333456666666666665543
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.28 E-value=0.0045 Score=61.25 Aligned_cols=129 Identities=13% Similarity=0.087 Sum_probs=70.9
Q ss_pred cCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCCC
Q 042931 176 IGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNLN 255 (471)
Q Consensus 176 l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~ 255 (471)
+....+|+.+.+..+ +.......+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|.++++|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 444555666655443 22122334566666766666554 33233345566666776666443 3322233566667777
Q ss_pred EEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCC
Q 042931 256 YMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLS 308 (471)
Q Consensus 256 ~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~ 308 (471)
.+.+.++.++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 7777666665444456666777777776543 332333456666666666554
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.20 E-value=0.004 Score=61.61 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=93.8
Q ss_pred hccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCC
Q 042931 151 EISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNL 230 (471)
Q Consensus 151 ~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L 230 (471)
.+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3455667777777654 33233455778889999998776 44334457888899999998654 442334567888999
Q ss_pred CEEeCCCCccccccccccCCCCCCCEEECCCCcCCCCCcccccCCCCCCEEeccCC
Q 042931 231 MELDLGTNSLIGPIPSTLGRLTNLNYMSLSRNMFGGLLPQEIGNLKNLIELNVGSN 286 (471)
Q Consensus 231 ~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 286 (471)
+.+.+.++.++..-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 99999888777555678889999999999754 55344567888889988877543
No 415
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.19 E-value=0.00044 Score=64.36 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=61.5
Q ss_pred hcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCc--ccEEEEEEeCCee
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNI--VKLYGFCLHRKCM 434 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~ 434 (471)
....++......+.|..+.||++...+|..+++|...... ...+.+|.+++..+.+.++ .+++++....+..
T Consensus 17 ~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~ 90 (264)
T 1nd4_A 17 ERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD 90 (264)
T ss_dssp TTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE
T ss_pred HhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCC
Confidence 3344555544444566799999987778889999986542 1345678888888765454 4588888877788
Q ss_pred eEEEeccCCCChh
Q 042931 435 FLIYEYMEGGSLF 447 (471)
Q Consensus 435 ~lV~ey~~~GsL~ 447 (471)
++||||++|.++.
T Consensus 91 ~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 91 WLLLGEVPGQDLL 103 (264)
T ss_dssp EEEEECCSSEETT
T ss_pred EEEEEecCCcccC
Confidence 9999999998884
No 416
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.18 E-value=0.00064 Score=63.72 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=68.9
Q ss_pred hcccccccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEeCCeee
Q 042931 357 RATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMF 435 (471)
Q Consensus 357 ~at~~f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~ 435 (471)
....+|......+.|+.+.||++.. .+..+++|+........ ...+.+|.+++..+. |..+.++++++...+..|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 3445677777888888999999975 36789999997532111 124667888888774 677888999999888999
Q ss_pred EEEeccCCCChhhhh
Q 042931 436 LIYEYMEGGSLFCNL 450 (471)
Q Consensus 436 lV~ey~~~GsL~~~L 450 (471)
+||||++|.++.+.+
T Consensus 87 lv~e~i~G~~l~~~~ 101 (263)
T 3tm0_A 87 LLMSEADGVLCSEEY 101 (263)
T ss_dssp EEEECCSSEEHHHHC
T ss_pred EEEEecCCeehhhcc
Confidence 999999999988753
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.13 E-value=0.0017 Score=64.90 Aligned_cols=131 Identities=8% Similarity=0.132 Sum_probs=90.0
Q ss_pred ccCCCCCCcEEEcccCCCCCCCCCccCCCCCcCEEEccCCCCCCCCcccccCCCCCCEEeCCCCccccccccccCCCCCC
Q 042931 175 EIGNLRNLVYLNISKNILTGTVPSTLGSLTNLKNMGLSYNQLSGPLPQEIGNLKNLMELDLGTNSLIGPIPSTLGRLTNL 254 (471)
Q Consensus 175 ~l~~L~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L 254 (471)
.|.++.+|+.+.+..+... .-...|.++++|+.+.+.. .++..-...|.++++|+.+++..+ ++..-...|.++++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 4667888999998766543 3345688999999999964 455344457888999999999765 444445688999999
Q ss_pred CEEECCCCcCCCCCcccccCCCCCCEEeccCCcCcCCCchhhhcCCCCCcccCCCCcC
Q 042931 255 NYMSLSRNMFGGLLPQEIGNLKNLIELNVGSNSLIGPIPSTLGLLTDLSYLDLSCNQF 312 (471)
Q Consensus 255 ~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~l~~N~l 312 (471)
+.+.+..+ ++..-...|.++.+|+.+++.++.... ..+....+|+.+.+..|.+
T Consensus 337 ~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 337 ERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 99999755 554456788999999999998875431 3456677888887766654
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.86 E-value=0.0013 Score=62.96 Aligned_cols=77 Identities=18% Similarity=0.174 Sum_probs=59.1
Q ss_pred cceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCC---CcccEEEEEEeCCeeeEEEec
Q 042931 364 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR---NIVKLYGFCLHRKCMFLIYEY 440 (471)
Q Consensus 364 ~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lV~ey 440 (471)
..+.++.|.++.||++...+|+.++||+....... ....|.+|.+.++.++|. .+.+++++. ..++||||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~---~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc---hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 34678999999999999888999999997543211 124577899999999875 577777753 46899999
Q ss_pred cCCCChh
Q 042931 441 MEGGSLF 447 (471)
Q Consensus 441 ~~~GsL~ 447 (471)
++++++.
T Consensus 92 l~g~~~~ 98 (288)
T 3d1u_A 92 VDERPPT 98 (288)
T ss_dssp CCCCCCC
T ss_pred cccCCCC
Confidence 9998753
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.74 E-value=0.0029 Score=52.91 Aligned_cols=33 Identities=30% Similarity=0.332 Sum_probs=13.4
Q ss_pred CcEEEcccCCCCCCCCCccCCCCCcCEEEccCC
Q 042931 182 LVYLNISKNILTGTVPSTLGSLTNLKNMGLSYN 214 (471)
Q Consensus 182 L~~L~L~~N~l~g~~p~~l~~l~~L~~L~L~~N 214 (471)
|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 65 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGAN 65 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCC
Confidence 444444444444322233333444444444443
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.50 E-value=0.0008 Score=60.52 Aligned_cols=14 Identities=0% Similarity=0.342 Sum_probs=6.6
Q ss_pred CCCcEEEcccCCCC
Q 042931 180 RNLVYLNISKNILT 193 (471)
Q Consensus 180 ~~L~~L~L~~N~l~ 193 (471)
+.|+.|+|++|++.
T Consensus 70 ~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 70 KHIEKFSLANTAIS 83 (197)
T ss_dssp SCCCEEECTTSCCB
T ss_pred CCcCEEEccCCCCC
Confidence 44444444444443
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.46 E-value=0.0047 Score=51.57 Aligned_cols=55 Identities=22% Similarity=0.244 Sum_probs=37.5
Q ss_pred EEcCCCCCC-ccCchhccCCCCCCEEeccCCCCCCcCCcccCCCCCCcEEEcccCCCC
Q 042931 137 LTFQSFPLA-GSIPPEISALSKLQRLDLSSNRLTGSIPSEIGNLRNLVYLNISKNILT 193 (471)
Q Consensus 137 L~L~~n~l~-g~ip~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L~~N~l~ 193 (471)
++.++++++ ..+|..+. ++|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 13 v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 13 VDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 344455554 34554332 36888889888888544556778888999999988765
No 422
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.18 E-value=0.0019 Score=58.05 Aligned_cols=19 Identities=11% Similarity=0.064 Sum_probs=11.4
Q ss_pred hhhhcCCCCCcccCCCCcC
Q 042931 294 STLGLLTDLSYLDLSCNQF 312 (471)
Q Consensus 294 ~~l~~l~~L~~L~l~~N~l 312 (471)
..+..-+.|+.|+++.|..
T Consensus 151 ~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 151 MAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCCcCeEeccCCCc
Confidence 3445556677777766553
No 423
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=95.52 E-value=0.029 Score=54.96 Aligned_cols=81 Identities=17% Similarity=0.328 Sum_probs=56.2
Q ss_pred ceeecCCccccEEEEEeCCCcEEEEEEcc--ccchHHHHHHHHHHHHHHHHhccC--CCCcccEEEEEEeC---CeeeEE
Q 042931 365 RYCIGTGGYGSVYKAQLPNGKVFALKKLH--TSETEELAFIKSFRNEAQVLSQVL--HRNIVKLYGFCLHR---KCMFLI 437 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~--~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lV 437 (471)
...++.|.++.||+....+ ..+++|+.. ..... .....+.+|..++..+. +..+.++++++.+. +..++|
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4568999999999988754 577888876 33211 11245677888888876 45678899988765 457999
Q ss_pred EeccCCCChhh
Q 042931 438 YEYMEGGSLFC 448 (471)
Q Consensus 438 ~ey~~~GsL~~ 448 (471)
|||++|..+.+
T Consensus 120 me~v~G~~l~~ 130 (359)
T 3dxp_A 120 MEFVSGRVLWD 130 (359)
T ss_dssp EECCCCBCCCC
T ss_pred EEecCCeecCC
Confidence 99999987753
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=93.00 E-value=0.29 Score=47.09 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=57.5
Q ss_pred ceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC---CCCcccEEEEEEeCCeeeEEEecc
Q 042931 365 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL---HRNIVKLYGFCLHRKCMFLIYEYM 441 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lV~ey~ 441 (471)
...++.|.+..+|+... ++..+++|+..... ...|.+|.+.++.+. ...+.++++++...+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY------RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc------HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 45789999999999875 46678889876432 245667877776663 356888888888788899999999
Q ss_pred CCCCh
Q 042931 442 EGGSL 446 (471)
Q Consensus 442 ~~GsL 446 (471)
++..+
T Consensus 114 ~G~~~ 118 (312)
T 3jr1_A 114 NKSKN 118 (312)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 99865
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=91.86 E-value=0.2 Score=47.23 Aligned_cols=76 Identities=18% Similarity=0.181 Sum_probs=51.7
Q ss_pred cceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCC---CcccEEEEEEeCCeeeEEEec
Q 042931 364 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR---NIVKLYGFCLHRKCMFLIYEY 440 (471)
Q Consensus 364 ~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lV~ey 440 (471)
....+|.|..+.||+.+..+|+.+.+|+-....... ...|.+|...|+.+.-. -+.+++++ +..++||||
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 346789999999999999999999999875432111 13466788877766322 23444443 234789999
Q ss_pred cCCCCh
Q 042931 441 MEGGSL 446 (471)
Q Consensus 441 ~~~GsL 446 (471)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 426
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=90.99 E-value=0.63 Score=42.98 Aligned_cols=78 Identities=18% Similarity=0.178 Sum_probs=55.1
Q ss_pred ecCCccc-cEEEEEeC-CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCCcccEEEEEEeCCeeeEEEeccCCC
Q 042931 368 IGTGGYG-SVYKAQLP-NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRNIVKLYGFCLHRKCMFLIYEYMEGG 444 (471)
Q Consensus 368 lG~G~~g-~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ey~~~G 444 (471)
+..|..| .||+.... ++..+.+|+-.... ...+.+|..+++.+. +--+.++++++.+.+..++||||+++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~------~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSV------ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETHH------HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCCC------HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 4456555 58987653 56778899875432 235667888777663 223667889998889999999999998
Q ss_pred Chhhhhh
Q 042931 445 SLFCNLH 451 (471)
Q Consensus 445 sL~~~L~ 451 (471)
++.+...
T Consensus 106 ~~~~~~~ 112 (272)
T 4gkh_A 106 TAFQVLE 112 (272)
T ss_dssp EHHHHHH
T ss_pred ccccccc
Confidence 7766543
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=89.75 E-value=0.36 Score=47.78 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=47.3
Q ss_pred ceeecCCccccEEEEEeC-CCcEEEEEEccccch--HHH--HHHHHHHHHHHHHhccCC--CCcc-cEEEEEEeCCeeeE
Q 042931 365 RYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSET--EEL--AFIKSFRNEAQVLSQVLH--RNIV-KLYGFCLHRKCMFL 436 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~--~~~--~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 436 (471)
.+.+|.|.++.||++... ++..++||....... ... .....+..|.+++..+.+ +..| +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999753 467899998754221 000 011234567777776632 3444 44433 4555689
Q ss_pred EEeccCCC
Q 042931 437 IYEYMEGG 444 (471)
Q Consensus 437 V~ey~~~G 444 (471)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 428
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=89.63 E-value=0.64 Score=44.47 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=51.8
Q ss_pred cccceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC---C-CcccEEEEEEeCCeeeEE
Q 042931 362 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH---R-NIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 362 f~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~g~~~~~~~~~lV 437 (471)
......++.|....||+. |..+++|+...... ...+.+|.+++..+.+ + .+.+++++ +..++|
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~-----~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPKRDSV-----RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEESSHHH-----HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHH-----HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 334567899999999997 66788888754321 2347788888877765 2 23444443 567899
Q ss_pred EeccCCCChhh
Q 042931 438 YEYMEGGSLFC 448 (471)
Q Consensus 438 ~ey~~~GsL~~ 448 (471)
|||++|.++.+
T Consensus 106 me~i~G~~l~~ 116 (320)
T 3r70_A 106 MKYIKGERITY 116 (320)
T ss_dssp EECCCCBCCCH
T ss_pred EeecCCccccc
Confidence 99999988863
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=87.92 E-value=1.3 Score=43.27 Aligned_cols=74 Identities=12% Similarity=0.199 Sum_probs=54.0
Q ss_pred ceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCC--cccEEEEEEeC-CeeeEEEecc
Q 042931 365 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN--IVKLYGFCLHR-KCMFLIYEYM 441 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lV~ey~ 441 (471)
...++.|....+|+... +|..+++|...... .+.+|..++..+.... +.++++++... +..|+||||+
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~--------~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD--------GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCCH--------HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCchh--------hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 45688899999999875 57788999885432 3556777777765433 45677777654 5679999999
Q ss_pred CCCChh
Q 042931 442 EGGSLF 447 (471)
Q Consensus 442 ~~GsL~ 447 (471)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 987664
No 430
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=85.21 E-value=1.8 Score=41.09 Aligned_cols=74 Identities=15% Similarity=0.084 Sum_probs=52.8
Q ss_pred eeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCC---CcccEEEEEE-eCCeeeEEEecc
Q 042931 366 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHR---NIVKLYGFCL-HRKCMFLIYEYM 441 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~ey~ 441 (471)
..++.|....||+. |..+++|+-... .....+.+|.+++..+.+. -+.++++++. ..+..++||||+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 45788888889987 566788885322 1235677899999888653 3566677664 345678999999
Q ss_pred CCCChhh
Q 042931 442 EGGSLFC 448 (471)
Q Consensus 442 ~~GsL~~ 448 (471)
+|..+.+
T Consensus 96 ~G~~l~~ 102 (306)
T 3tdw_A 96 QGQILGE 102 (306)
T ss_dssp CSEECHH
T ss_pred CCeECch
Confidence 9987765
No 431
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.10 E-value=0.11 Score=53.06 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=17.2
Q ss_pred eeecCCccccEEEEEeCC-CcEEEE------EEccccchHHHHHHHHHHHHHHHHhccCCCCcccEEEEEEe
Q 042931 366 YCIGTGGYGSVYKAQLPN-GKVFAL------KKLHTSETEELAFIKSFRNEAQVLSQVLHRNIVKLYGFCLH 430 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~-g~~vav------K~l~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 430 (471)
+.+| ||.||+|.+.. ...||| |......... ...+.|.+|..++.+.+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~-e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSE-KRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccc-cccccccccccccccccccccCCCcceEEe
Confidence 4455 99999998744 467888 7765533322 223567788888899999999999988764
No 432
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=80.67 E-value=0.77 Score=44.45 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=52.7
Q ss_pred eee-cCCccccEEEEEeC-------CCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC---CCcccEEEEEEeC---
Q 042931 366 YCI-GTGGYGSVYKAQLP-------NGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH---RNIVKLYGFCLHR--- 431 (471)
Q Consensus 366 ~~l-G~G~~g~vy~~~~~-------~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~--- 431 (471)
..+ +.|....+|+.... ++..+++|+-.............+.+|..++..+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999988754 266788888754320000001234466666666532 2466778877654
Q ss_pred CeeeEEEeccCCCChhh
Q 042931 432 KCMFLIYEYMEGGSLFC 448 (471)
Q Consensus 432 ~~~~lV~ey~~~GsL~~ 448 (471)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877764
No 433
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=76.83 E-value=1.9 Score=40.56 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=49.0
Q ss_pred eeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-CCC--cccEEEEEEeCC---eeeEEEe
Q 042931 366 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-HRN--IVKLYGFCLHRK---CMFLIYE 439 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~e 439 (471)
..++.|....||+.. ..+++|+.... .....+.+|.+++..+. +.. +.+++++....+ ..|+|||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 458899999999863 45788886543 12356778888888773 333 334444433332 3489999
Q ss_pred ccCCCChhh
Q 042931 440 YMEGGSLFC 448 (471)
Q Consensus 440 y~~~GsL~~ 448 (471)
|++|.++.+
T Consensus 97 ~i~G~~l~~ 105 (304)
T 3sg8_A 97 KIKGVPLTP 105 (304)
T ss_dssp CCCCEECCH
T ss_pred ccCCeECCc
Confidence 999988764
No 434
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=74.89 E-value=6.1 Score=37.36 Aligned_cols=76 Identities=21% Similarity=0.374 Sum_probs=40.0
Q ss_pred eeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhc--cCCCCcccEE-E--EEEeCCeeeEEEec
Q 042931 366 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQ--VLHRNIVKLY-G--FCLHRKCMFLIYEY 440 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~-g--~~~~~~~~~lV~ey 440 (471)
..++.|..+.||+....+|. +++|+..... .. .....+.++.+.. +..|.++... | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~-~~---~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRPE-KK---ALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSCH-HH---HHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCCH-HH---HHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 34566778899998876554 8899997632 11 1111112223332 2334444311 1 12246678999999
Q ss_pred cCCCCh
Q 042931 441 MEGGSL 446 (471)
Q Consensus 441 ~~~GsL 446 (471)
++|.++
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998654
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=65.90 E-value=8.2 Score=36.39 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=45.0
Q ss_pred eeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCC--cccEEEE-----EEeCCeeeEEE
Q 042931 366 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN--IVKLYGF-----CLHRKCMFLIY 438 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lV~ 438 (471)
..++ |....||+....+|+.+++|+........ +.+..|..++..+.... +++++.. ....+..++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~----~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTA----DQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCH----HHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCH----HHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 3456 77889999877778789999987432111 23334555554443211 3333332 12245668899
Q ss_pred eccCCCCh
Q 042931 439 EYMEGGSL 446 (471)
Q Consensus 439 ey~~~GsL 446 (471)
||++|..+
T Consensus 107 ~~i~G~~~ 114 (328)
T 1zyl_A 107 PSVGGRQF 114 (328)
T ss_dssp ECCCCEEC
T ss_pred EecCCCCC
Confidence 99988543
No 436
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=57.21 E-value=18 Score=35.60 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=44.2
Q ss_pred ceeecCCccccEEEEEeCCCcEEEEEEccccch--HHH----HHHHHHHHHHHHH-hccCCCCcccEEEEEEeCCeeeEE
Q 042931 365 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSET--EEL----AFIKSFRNEAQVL-SQVLHRNIVKLYGFCLHRKCMFLI 437 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~----~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~~~~~~lV 437 (471)
...+|.|....||++.. ++..++||....... ... .....++.|+..+ .......+.+++++. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 35689999999999864 567899994321100 000 0112333443322 222334566666655 5667999
Q ss_pred Eecc-CC
Q 042931 438 YEYM-EG 443 (471)
Q Consensus 438 ~ey~-~~ 443 (471)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=44.28 E-value=21 Score=35.40 Aligned_cols=72 Identities=22% Similarity=0.303 Sum_probs=45.9
Q ss_pred eeecCCccccEEEEEeCC--------CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCc-ccEEEEEEeCCeeeE
Q 042931 366 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNI-VKLYGFCLHRKCMFL 436 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~l 436 (471)
..++.|....+|+...++ +..+.+|+....... ..+.+|..++..+...++ .++++.+. + .+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~-----~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~ 149 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETE-----SHLVAESVIFTLLSERHLGPKLYGIFS--G--GR 149 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCH-----HHHHHHHHHHHHHHHTTSSSCEEEEET--T--EE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcH-----HHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CE
Confidence 457778888999998753 478889988542110 223357777766643334 56666553 2 38
Q ss_pred EEeccCCCCh
Q 042931 437 IYEYMEGGSL 446 (471)
Q Consensus 437 V~ey~~~GsL 446 (471)
||||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986444
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=42.39 E-value=19 Score=33.94 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=39.1
Q ss_pred eecCCcccc-EEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCC--CCcccEEEEEEeCCeeeEEEeccCC
Q 042931 367 CIGTGGYGS-VYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLH--RNIVKLYGFCLHRKCMFLIYEYMEG 443 (471)
Q Consensus 367 ~lG~G~~g~-vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lV~ey~~~ 443 (471)
.++.|.... +|+....+|..+++|....... +.+..|+.++..+.. -.+.+++++..+.+ ++|||++++
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 354454444 6677654466777776644320 112234444444422 22455666543333 789999988
Q ss_pred CChhhhhhc
Q 042931 444 GSLFCNLHN 452 (471)
Q Consensus 444 GsL~~~L~~ 452 (471)
..+.+++..
T Consensus 97 ~~l~~~l~~ 105 (333)
T 3csv_A 97 ALFTEVINN 105 (333)
T ss_dssp CBHHHHHHH
T ss_pred cchHHHhcC
Confidence 777766653
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=38.01 E-value=96 Score=28.61 Aligned_cols=75 Identities=11% Similarity=0.005 Sum_probs=40.3
Q ss_pred eeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC-----CCCcccEE-E--EEEeCCeeeEE
Q 042931 366 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL-----HRNIVKLY-G--FCLHRKCMFLI 437 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lV 437 (471)
..++.|....+|+....+| .+++|+...... .+.+..|..++..+. -|.++... | +....+..+++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-----~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-----KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC-----HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 4567788889999887666 577898865211 112334555544442 23333211 1 11224567899
Q ss_pred EeccCCCCh
Q 042931 438 YEYMEGGSL 446 (471)
Q Consensus 438 ~ey~~~GsL 446 (471)
|||++|..+
T Consensus 102 ~~~l~G~~~ 110 (322)
T 2ppq_A 102 ISFLEGMWL 110 (322)
T ss_dssp EECCCCBCC
T ss_pred EEeCCCcCC
Confidence 999998654
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=28.22 E-value=61 Score=31.48 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=40.8
Q ss_pred eeecCCccccEEEEEeCC--------CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCC-cccEEEEEEeCCeeeE
Q 042931 366 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRN-IVKLYGFCLHRKCMFL 436 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~g~~~~~~~~~l 436 (471)
..+.-|....+|+...++ +..+.+|+-...... ...+.+|.++++.+.-.. ..++++++. + .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~----~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG----VDSLVLESVMFAILAERSLGPQLYGVFP--E--GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC----HHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch----HHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--cc
Confidence 346667788899987642 468889886432111 123446777776653222 245666553 2 29
Q ss_pred EEeccCCCChh
Q 042931 437 IYEYMEGGSLF 447 (471)
Q Consensus 437 V~ey~~~GsL~ 447 (471)
||||++|..+.
T Consensus 128 v~e~i~G~~l~ 138 (379)
T 3feg_A 128 LEQYIPSRPLK 138 (379)
T ss_dssp EEECCSEEECC
T ss_pred EEEEecCccCC
Confidence 99999986553
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=27.20 E-value=1.2e+02 Score=28.59 Aligned_cols=68 Identities=10% Similarity=0.117 Sum_probs=40.1
Q ss_pred cCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccC---CCCcccEEEE------EEeCCeeeEEEe
Q 042931 369 GTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVL---HRNIVKLYGF------CLHRKCMFLIYE 439 (471)
Q Consensus 369 G~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~------~~~~~~~~lV~e 439 (471)
|.|....||+....+| .+++|+....... +|..++..+. -|.+++++.. ....+..++|||
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~~---------~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~ 101 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHDE---------INLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYP 101 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSCC---------HHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEE
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccch---------HHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEe
Confidence 3333678999987677 8899988654321 2333333221 1223343322 223567799999
Q ss_pred ccCCCCh
Q 042931 440 YMEGGSL 446 (471)
Q Consensus 440 y~~~GsL 446 (471)
|++|..+
T Consensus 102 ~i~G~~~ 108 (339)
T 3i1a_A 102 FIHAPNG 108 (339)
T ss_dssp CCCCCBT
T ss_pred ccCCCcC
Confidence 9998765
No 442
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=25.60 E-value=58 Score=30.02 Aligned_cols=71 Identities=13% Similarity=0.096 Sum_probs=40.8
Q ss_pred ceeecCCccccEEEEEeCCCcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCc-ccEEEEEEeCCeeeEEEecc-C
Q 042931 365 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNI-VKLYGFCLHRKCMFLIYEYM-E 442 (471)
Q Consensus 365 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~ey~-~ 442 (471)
...++.|....+|+. ..+++|+-....... -...+|..++..+....+ .+++++ ..+.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 467888999999998 457788776432110 011246555555533233 345543 344457999999 5
Q ss_pred CCCh
Q 042931 443 GGSL 446 (471)
Q Consensus 443 ~GsL 446 (471)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=23.69 E-value=65 Score=30.72 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=40.8
Q ss_pred eeecCCccccEEEEEeCC---------CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCc-ccEEEEEEeCCeee
Q 042931 366 YCIGTGGYGSVYKAQLPN---------GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNI-VKLYGFCLHRKCMF 435 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~ 435 (471)
..++.|..-.+|+....+ +..+++|+........ .....|.+++..+...++ .++++.. . -+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~----~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL----YNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT----SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce----ecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 456777788899987654 2678888875432110 012356666665543333 3566543 2 26
Q ss_pred EEEeccCCCCh
Q 042931 436 LIYEYMEGGSL 446 (471)
Q Consensus 436 lV~ey~~~GsL 446 (471)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=20.34 E-value=1.1e+02 Score=30.58 Aligned_cols=73 Identities=22% Similarity=0.258 Sum_probs=44.4
Q ss_pred eeecCCccccEEEEEeCC-CcEEEEEEccccchHHHHHHHHHHHHHHHHhccCCCCc-ccEEEEEEeCCeeeEEEeccCC
Q 042931 366 YCIGTGGYGSVYKAQLPN-GKVFALKKLHTSETEELAFIKSFRNEAQVLSQVLHRNI-VKLYGFCLHRKCMFLIYEYMEG 443 (471)
Q Consensus 366 ~~lG~G~~g~vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~ey~~~ 443 (471)
..++.|-...+|+....+ +..+++|+........ . ...+|..++..+...++ .++++++ .+ .+||||++|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---i-dR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G 185 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---I-NREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDG 185 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---S-CHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCS
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---c-CHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCC
Confidence 457778888999998765 4678888874321100 0 01357777777754445 4666666 22 259999997
Q ss_pred CCh
Q 042931 444 GSL 446 (471)
Q Consensus 444 GsL 446 (471)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
Done!