BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042941
(481 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/494 (71%), Positives = 413/494 (83%), Gaps = 14/494 (2%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
AKT+V+IL+E R EM++KIE+CGIKVS ELV EVLS VRNDWEAAFTFFLWA +Q G
Sbjct: 25 AKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWAARQPG 84
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAHS REYH+MI+ILGK+RKFDTAW LIDEMRG +TG SLVT QTLLI+IR+YCAVHDVG
Sbjct: 85 YAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVG 144
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
RAIN FYAYKRFKF +GIE+FQ LLSALCRYKNVQDAE LM+CNK VFP NTKSFNI+LN
Sbjct: 145 RAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLN 204
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWCN+IGS RE+ERVW EMS+RGI +DVVS++ ++SCYSKA +L++VLRL+ QMK++GIE
Sbjct: 205 GWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIE 264
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DRKVYNAVIHALAKGRLV +A +LMK+MEEKGVAPN+VTYNSLIKPLC+ARK++EA+ A
Sbjct: 265 PDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGA 324
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
FD+ML+R ISPTIRTYHAFL I+RTGEEVF LLE MRKMGCQP NDTYIMLI+KF RWRQ
Sbjct: 325 FDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQ 384
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
NVFK+W+E+SENG PDRSSY LIH LFLNG+L+ AH+YY EMKEKQLLPEPK DE+
Sbjct: 385 LENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPKIDEM 444
Query: 421 LQDWSYNKQFVERQIASLKAHQ-------------PQSGQNTRVISKKSDQDREFLQQPE 467
LQ W NKQ E Q +++Q QS + TR I K+S +R F++Q E
Sbjct: 445 LQTWLSNKQIAEGQTTESRSNQCQTTELRSNQLDCSQSREQTRGIPKRS-HERNFIRQAE 503
Query: 468 TRRVVRHQGFSFWE 481
TR+VVR +G SFWE
Sbjct: 504 TRKVVRERGISFWE 517
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/481 (71%), Positives = 403/481 (83%), Gaps = 3/481 (0%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH 63
++ IL + S EM+NKIE CG+KVS ELV EVLS +RNDWEAAFTFFLWAG+Q GY+H
Sbjct: 100 IMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGRQLGYSH 159
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S REYH MI+ILGK+RKFDTAWALIDEMRG +TG SLVT QTLLI+IR+YCAVHDVGRAI
Sbjct: 160 SVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAI 219
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
N FYA+KRFKF +GI++FQ LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI+LNGWC
Sbjct: 220 NTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWC 279
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
N+IGS REA+R+W EM +R I YDVVS++ IISCYSKA NL+KV +L++QMK +GIE DR
Sbjct: 280 NVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDR 339
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
K+YN+VI ALAKGR V +AI+LMK+MEEKG+APN VTYNSLIKPLC+ARK+DEAR FDE
Sbjct: 340 KIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDE 399
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
MLQ G SPTIRTYHAF +RTGEEVF LLE+MRK+GC PT DTYIMLI+KF RWRQF +
Sbjct: 400 MLQHGHSPTIRTYHAFFRSLRTGEEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDD 459
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
VFK+WN+ISENG GPDRSSY LIH LFLNGKLEEA+++Y +MKEKQLLP+PK DE+LQ
Sbjct: 460 VFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDPKLDEMLQT 519
Query: 424 WSYNKQFVERQIASLKAHQ---PQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFW 480
W NKQ E Q+ K Q + G R SK+ + +++FLQQ E RRVVR +GFSFW
Sbjct: 520 WLSNKQVAECQMTESKVDQLDCSRLGNQRRATSKRINHEKDFLQQAEIRRVVRERGFSFW 579
Query: 481 E 481
+
Sbjct: 580 K 580
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/484 (68%), Positives = 397/484 (82%), Gaps = 3/484 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
+ +VDIL+E S +++K+E CG+ SSELV EVLS VRN WEAAFTFFLWA KQ G
Sbjct: 83 VRRIVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPG 142
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAHS R YH+MI+ILGK+RKFDTAWALIDEMRGG TG SLVT TL I+IRRYCAVHDVG
Sbjct: 143 YAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVG 202
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
+AIN FYA+K+FKF VGIE+FQ LLSALCRYKNVQDAE L+FCN++VFPF+TKSFNIILN
Sbjct: 203 KAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILN 262
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWCN+IGS REAER W EMS RGI DVVS+S IISCYSK NL+KVL+LF+QMK M I
Sbjct: 263 GWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIA 322
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DRKVYNAV+HALAK VK+A++LMK+ME KG+AP+ VTYNSLIKPL +ARK++EA++
Sbjct: 323 PDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEV 382
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
FDEMLQRG+SPTIRTYHAF I+++GEEVF LLE M++ GC P DTYIMLI++F RWRQ
Sbjct: 383 FDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQ 442
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
NVFK+W+E+SENG GPDRSSY LIH LFLNGKLEEA++YY+EMKEKQ LPEPKT+++
Sbjct: 443 LDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFLPEPKTEDM 502
Query: 421 LQDWSYNKQFVERQIASLKAHQPQSGQNTR---VISKKSDQDREFLQQPETRRVVRHQGF 477
LQ W K+ + ++ LK +Q GQ+++ V SK D R+F QQPETR+V R +GF
Sbjct: 503 LQAWISGKETADVRMIDLKDNQSDHGQSSKKTLVTSKNVDLGRDFRQQPETRKVTRERGF 562
Query: 478 SFWE 481
SFWE
Sbjct: 563 SFWE 566
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/480 (67%), Positives = 385/480 (80%), Gaps = 10/480 (2%)
Query: 3 TLVDILREF-SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
++DI R F R ++RNK+E C IKVS ELV VLS +RNDWEAAFTFF+WAGKQ GY
Sbjct: 14 AIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGY 73
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
AHS REYH+MI+ILGK+RKFDTAWALIDEMRGG G SLVT QTLLI+IRRYCAVHDV +
Sbjct: 74 AHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAK 133
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
AIN FYA+KRF F +G+E+FQ LLSALCRYKNV+DAE+L+FCNKDVFPFNTKSFNIILNG
Sbjct: 134 AINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNG 193
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WC +IGS R+ ERVW EM++RGI +D VS++ ISCYSK RNLHKVLRLF+ MKRM I+
Sbjct: 194 WC-VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDP 252
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DRKVYNAVIH+LAKGR +K+A L+K+MEEKG+ NVVTYNS+IKPLCKAR+ DEAR F
Sbjct: 253 DRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVF 312
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+E+LQRG+ PTI+TYHAFL +RT EE+F LL+ MR MGC PT DTYIMLI+KF RWRQ
Sbjct: 313 EELLQRGLCPTIQTYHAFLRFLRTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQL 372
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
NV ++W+E+SENG PDRSSY LIH LFLNGKLE+AH+YY+EMKEK LLPEPK DE+L
Sbjct: 373 DNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLPEPKIDEVL 432
Query: 422 QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFWE 481
Q W K + + G+N+ + K+D F +QPE R+V RH+GFSFW+
Sbjct: 433 QTWLAGKSVFQENPSDCSG----EGKNSSLFPNKND----FHRQPEIRKVSRHRGFSFWK 484
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/480 (65%), Positives = 381/480 (79%), Gaps = 5/480 (1%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
T+V +L+ R E+RNK+EEC +K S+ELV E+LS VRNDWE AFTFF+WAGKQ GY
Sbjct: 48 TIVKLLKNCGSDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWAGKQQGYV 107
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
S REYH+MI+ILGK+RKFDTAW LIDEMR + PSLV QTLLI+IR+YCAVHDVG+A
Sbjct: 108 RSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKA 165
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
IN F+AYKRFK +GI+DFQ LLSALCRYKNV DAEHL+FCNKD +PF+ KSFNI+LNGW
Sbjct: 166 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGW 225
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
CN+IGS REAERVWMEM G+ +DVVS+S +ISCYSK +L+KVL+LFD+MK+ IE D
Sbjct: 226 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPD 285
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
RKVYNAVIHALAK V +A +LMK+M EEKG+ PNVVTYNSLIKPLCKARK +EA+Q F
Sbjct: 286 RKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVF 345
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
DEML++G+ PTIRTYHAF+ I+RTGEEVF LL MRKMGCQPT DTYIMLI+K RWR F
Sbjct: 346 DEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDF 405
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
NV +WNE+ E G GPD SSY +IH LFLNGK+EEA+ YY EMKEK + P ++++
Sbjct: 406 DNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPNENVEDMI 465
Query: 422 QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFWE 481
Q W KQ+ E+++ K SG + I KKS++++ FLQQPE R+VVR G+SFW+
Sbjct: 466 QSWFSGKQYAEQRVIDSKGD--VSGVDKGGIVKKSEREKNFLQQPEVRKVVRGHGYSFWD 523
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/484 (64%), Positives = 388/484 (80%), Gaps = 3/484 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
KT++DI+ E S+ + K+E C + +S++LV EVL RNDWEAAFTFFLWAGKQ G
Sbjct: 32 VKTILDIMHEMGSGPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAFTFFLWAGKQPG 91
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAHS REYH+MI+ILGK+RKFDTAW LI+EMR G TGPSLVT QTLLI+IR+YCAVHDV
Sbjct: 92 YAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVA 151
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
RAIN FYAYK+F F VG+E+F LLSALCRYKNVQDAEHL+FCNK++FP +TKSFNIILN
Sbjct: 152 RAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILN 211
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWCN+I S+ AER+W EMS+R I +DVVS+ IISCYSK+ L+KVLR+FD+MK+ I
Sbjct: 212 GWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKIT 271
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DRKVYNAVI+ALAKGRLVK+A++L+ ++E+ V PNVVTYNSLIKPLCKA K+DEA+Q
Sbjct: 272 PDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQL 331
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
F E+L+R +SPTI+T+HAF I+RT EEVF LL+ M+++GC PT +TYIML++KF RWRQ
Sbjct: 332 FYEILKRHLSPTIQTFHAFFRILRTKEEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQ 391
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+VFK+W+ + E+G G DRSSY LIH LFLNGKLEEAH YY EM+EK LPEPKT+E+
Sbjct: 392 LDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLPEPKTEEM 451
Query: 421 LQDWSYNKQFVERQIASLKAHQPQSG---QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
LQ W KQ E Q +L+ +Q ++ + + I K D+++ FL++PETRRV R +GF
Sbjct: 452 LQAWVSGKQATEGQETNLEPNQLENDTLKKKVKAIPSKFDREKAFLREPETRRVTRERGF 511
Query: 478 SFWE 481
SFWE
Sbjct: 512 SFWE 515
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/484 (62%), Positives = 389/484 (80%), Gaps = 3/484 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
KT++DI+ + E++ K+E+C +K SSELV EVLS VRNDWEAAFTFFLWAGKQ G
Sbjct: 101 VKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPG 160
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y HS REYH+MI++LGK+R+FDTAWAL++EMR G+TG S+VT QTLLI+IR+YCAVHDVG
Sbjct: 161 YDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVG 220
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
RAIN FYA+KRF F VG+ +FQGLLSALCRYKNVQDAEHL+FCNK+VFP +TKSFNIILN
Sbjct: 221 RAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILN 280
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWCN+I S+R AER+W EMS+R I +DVVS++ IISCYSK+ L++VL+LF+QMK+ I
Sbjct: 281 GWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNIT 340
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DRKVYNAVI +LAK R+VK+A++L+ ME+ V P+ +TYNSLIKPLCKARK+DEA++
Sbjct: 341 PDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEI 400
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
F+ ML+RGISP+IRT+HAF I+R EEVF LL+ M+++GC PT +TYIMLI+KF RWRQ
Sbjct: 401 FNVMLERGISPSIRTFHAFFRILRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQ 460
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
V ++WN + E+G G DRSSY LIH LFLN K+EEA++YY+EM+EK LPEPKT+ +
Sbjct: 461 LDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESM 520
Query: 421 LQDWSYNKQFVERQIASLKAHQPQSG---QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
LQ W +Q + Q L+ +Q + G ++ + I K D++++FL++PETR V R GF
Sbjct: 521 LQAWLSGRQVTDSQATDLEHNQLEHGGLKKSVKPIQSKFDREKDFLREPETRSVSREGGF 580
Query: 478 SFWE 481
SFWE
Sbjct: 581 SFWE 584
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/484 (64%), Positives = 379/484 (78%), Gaps = 3/484 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
KT++ I+ E S+++ K+E C I +S ELV EVLS RNDWEAAFTFFLWAGKQ G
Sbjct: 128 VKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLWAGKQPG 187
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAHS REYH+MI+ILGK+RKFDTAW LI+EMRGG G SLVT QTLLI+IR+YCAVHDV
Sbjct: 188 YAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCAVHDVA 247
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
RAIN FYAYKRF F VG+E+F LLSALCRYKNVQDAE+L+FCNKDVFP +TKSFNIILN
Sbjct: 248 RAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNIILN 307
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWCN+I S+ AER+W EM +R I +DVVS+ IISCYSK+ L+KVLR+FD+MK+ I
Sbjct: 308 GWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKIT 367
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DRKVYNAVI+ALAKGRLVK+A++L+ +ME V P+VVTYNSLIKPLCKA K+DEA+Q
Sbjct: 368 PDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQL 427
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
FDEML+R +SPTI+T+HAF I+RT EEVF LL+ M+++ C PT +TYIMLI+KF RW Q
Sbjct: 428 FDEMLKRHLSPTIQTFHAFFRILRTKEEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQ 487
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+VFK+W+ + E+ DRSSY LIH LFLNGKLEEA +YY EM+EK LPEPKT+E+
Sbjct: 488 LDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFLPEPKTEEM 547
Query: 421 LQDWSYNKQFVERQIASLKAHQPQSG---QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
LQ W KQ E Q L+ Q ++ + + I K D+ + FL++PETRRV R +GF
Sbjct: 548 LQAWVSGKQATEGQEKDLEPSQLENDTLKKKVKGIPSKFDRKKAFLREPETRRVTRERGF 607
Query: 478 SFWE 481
SFWE
Sbjct: 608 SFWE 611
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/476 (63%), Positives = 375/476 (78%), Gaps = 8/476 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
++++ R E+RNK+EEC +K S+ELV E+LS VRNDWE AFTFF+WAGKQ GY S R
Sbjct: 63 LVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVR 122
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
EYH+MI+ILGK+RKFDTAW LIDEMR + PSLV QTLLI+IR+YCAVHDVG+AIN F
Sbjct: 123 EYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTF 180
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+AYKRFK +GI+DFQ LLSALCRYKNV DA HL+FCNKD +PF+ KSFNI+LNGWCN+I
Sbjct: 181 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI 240
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
GS REAERVWMEM G+ +DVVS+S +ISCYSK +L+KVL+LFD+MK+ IE DRKVY
Sbjct: 241 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 300
Query: 247 NAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
NAV+HALAK V +A +LMK+M EEKG+ PNVVTYNSLIKPLCKARK +EA+Q FDEML
Sbjct: 301 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 360
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
++G+ PTIRTYHAF+ I+RTGEEVF LL MRKMGC+PT +TYIMLI+K RWR F NV
Sbjct: 361 EKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL 420
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+W+E+ E GPD SSY +IH LFLNGK+EEA+ YY EMK+K + P ++++Q W
Sbjct: 421 LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 480
Query: 426 YNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFWE 481
KQ+ E++I K N I KKS++++ FLQQPE R+VVR G+SFW+
Sbjct: 481 SGKQYAEQRITDSKGE-----VNKGAIVKKSEREKNFLQQPEVRKVVREHGYSFWD 531
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/476 (63%), Positives = 375/476 (78%), Gaps = 8/476 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
++++ R E+RNK+EEC +K S+ELV E+LS VRNDWE AFTFF+WAGKQ GY S R
Sbjct: 103 LVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVR 162
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
EYH+MI+ILGK+RKFDTAW LIDEMR + PSLV QTLLI+IR+YCAVHDVG+AIN F
Sbjct: 163 EYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTF 220
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+AYKRFK +GI+DFQ LLSALCRYKNV DA HL+FCNKD +PF+ KSFNI+LNGWCN+I
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
GS REAERVWMEM G+ +DVVS+S +ISCYSK +L+KVL+LFD+MK+ IE DRKVY
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 247 NAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
NAV+HALAK V +A +LMK+M EEKG+ PNVVTYNSLIKPLCKARK +EA+Q FDEML
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
++G+ PTIRTYHAF+ I+RTGEEVF LL MRKMGC+PT +TYIMLI+K RWR F NV
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL 460
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+W+E+ E GPD SSY +IH LFLNGK+EEA+ YY EMK+K + P ++++Q W
Sbjct: 461 LLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Query: 426 YNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFWE 481
KQ+ E++I K N I KKS++++ FLQQPE R+VVR G+SFW+
Sbjct: 521 SGKQYAEQRITDSKGE-----VNKGAIVKKSEREKNFLQQPEVRKVVREHGYSFWD 571
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/431 (50%), Positives = 297/431 (68%), Gaps = 4/431 (0%)
Query: 2 KTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
+ +V F + R +E CG S +V VL+ +RN AA F WA Q GY
Sbjct: 82 EAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLARLRNSCAAAHAAFRWASAQPGY 141
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A YH+M+AIL K R+FD A AL+D+MR SL + +++LIRRYCA DV
Sbjct: 142 APGRHAYHSMLAILAKHRRFDDARALLDQMRRS----SLASPAAVMLLIRRYCAARDVAG 197
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
A+ AF A F G+ +F GLL+ALCRYKNVQDAEHL+ ++ FPF TKSFN++LNG
Sbjct: 198 AVAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNG 257
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WCN++ S REA+R W M +GI DVVS+ +ISC+SKA +L V++LF++MK G+
Sbjct: 258 WCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVP 317
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DRK+YNAV++ALAKGR V +A +L++SMEEKGVAP+ T+NSLI+PLCKAR++ EAR+
Sbjct: 318 DRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKML 377
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
D+ML RG+SP++RT+HA LD+ R+ EVF LL+ M+++ C P DT+IMLI+KF RWRQ
Sbjct: 378 DDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQH 437
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+V K+W+ + NG PDRS+Y LIH LFLNG+LEE+ +YY EMK K PE KT+E++
Sbjct: 438 DSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMI 497
Query: 422 QDWSYNKQFVE 432
Q W ++ +
Sbjct: 498 QAWLSGRELAK 508
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 295/431 (68%), Gaps = 4/431 (0%)
Query: 2 KTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
+ +V F + R +E CG S +V VL +RN AA F WA Q GY
Sbjct: 84 EAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLDRLRNSCAAAHAAFRWASAQPGY 143
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A H+M+AIL K R+FD A AL+D+MR SL + +++LIRRYCA DV
Sbjct: 144 APGRHACHSMLAILAKHRRFDDARALLDQMRRS----SLASPAAVMLLIRRYCAARDVAG 199
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
A+ AF A F G+ +F GLL+ALCRYKNVQDAEHL+ ++ FPF TKSFN++LNG
Sbjct: 200 AVAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNG 259
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WCN++ S REA+R W M +GI DVVS+ +ISC+SKA +L V++LF++MK G+
Sbjct: 260 WCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIP 319
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DRK+YNAV++ALAKG+ V +A +L++SMEEKGVAP+ T+NSLI+PLCKAR++ EAR+
Sbjct: 320 DRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKML 379
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
D+ML RG+SP++RT+HA LD+ R+ EVF LL+ M+++ C P DT+IMLI+KF RWRQ
Sbjct: 380 DDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQH 439
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+V K+W+ + NG PDRS+Y LIH LFLNG+LEE+ +YY EMK K PE KT+E++
Sbjct: 440 DSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMI 499
Query: 422 QDWSYNKQFVE 432
Q W ++ +
Sbjct: 500 QAWLSGRELAK 510
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/424 (53%), Positives = 288/424 (67%), Gaps = 5/424 (1%)
Query: 10 EFSHK-RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREY 68
E SH + R +E CG S LV LS +RN W AA FLWA Q YA
Sbjct: 78 EGSHADATRARTLLERCGAAASETLVVAALSRLRNSWAAAHAAFLWAAAQPDYAPGRHAC 137
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
H+M+AIL K R+FD A AL+DEMR SL + + +L+L+RRYCA DV RAI AF+A
Sbjct: 138 HSMLAILAKHRRFDDARALLDEMRRK----SLASPRAVLLLVRRYCAARDVTRAIAAFHA 193
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
F F G+ F GLLSALCRYKNVQDAEHL+ ++ FPF TKSFNI+LNGWCN++ S
Sbjct: 194 LPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGWCNMVCS 253
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
REA+R W M RGI DV S+ +ISC+SKA +L VL+LF+ MK GI DRKVYNA
Sbjct: 254 VREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNA 313
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
V++ALAKGR V +A +L++SMEE+G P+ TYNSLI PLCKAR++ EA Q FDEM+ RG
Sbjct: 314 VVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRG 373
Query: 309 ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ ++RT+HA D+ + EVF +L+ M+ + C+P DTYIMLI+KF RWRQ +V K+W
Sbjct: 374 LLASVRTFHALFDVATSPSEVFDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVEKLW 433
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+ + NG PDRS+Y LIH LFLNGKLEEA +YY EMK K PE KT+ ++Q W +
Sbjct: 434 SAMPTNGLNPDRSAYIVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQKTESMIQAWLTGR 493
Query: 429 QFVE 432
+ +
Sbjct: 494 ELAK 497
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/419 (51%), Positives = 286/419 (68%), Gaps = 4/419 (0%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ CG + S LV L+ +RN AA F WA Q GYA R H+M+ IL K R+F
Sbjct: 93 LDGCGAEASEPLVVASLARLRNSCAAAHAAFRWAAAQPGYAPGRRACHSMLDILAKHRRF 152
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D A AL+DEMR T + +L+L+RR+CA DV A+ AF A F F G +F
Sbjct: 153 DAARALLDEMRRAST----ASPAAVLLLVRRHCAARDVAGAVAAFRALPSFGFHTGAAEF 208
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALCRYKNVQDAE+L+ + FPF TKSFNI+LNGWCNI+ S REA+R W M +
Sbjct: 209 HGLLSALCRYKNVQDAENLLISWQKEFPFETKSFNIVLNGWCNIVCSVREAKRFWSSMER 268
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+GI DV+S+ +ISC+SKA +L V++LF++M G+ DRKVYNA++ ALAKGR VK+
Sbjct: 269 KGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEAGVAPDRKVYNAIVFALAKGRCVKE 328
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L++SMEEK VAP+ T+NSLI PLCKAR+ EA + FD MLQR +SP++RT+HA L+
Sbjct: 329 AKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDAMLQRKLSPSVRTFHALLN 388
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ R EVF LL+ M+++ C+P DTYIMLI+KF RWR+ +V K+W+ + NG PDRS
Sbjct: 389 VARNSTEVFDLLDKMKQLRCEPEMDTYIMLIRKFCRWREHESVEKLWSAMPANGLSPDRS 448
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+Y LIH LFLNG+LEEA +YY EMK K LPE KT+E++ W ++ + + S K
Sbjct: 449 AYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEKKTEEMVMAWLEGRELAKASVISSKG 507
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/411 (53%), Positives = 286/411 (69%), Gaps = 4/411 (0%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ CG + S LV LS +RN AA F WA Q GYA R H+M+AIL K R+F
Sbjct: 94 LDGCGAEASEPLVVAALSRLRNSCAAAHAAFRWAAAQPGYAPGRRACHSMLAILAKHRRF 153
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D A AL+DEMR S+ + +L+L+RR+CA DV A+ AF A F F G+ +F
Sbjct: 154 DAARALLDEMRRA----SMASPAAVLLLVRRHCAARDVAAAVAAFRALPSFGFDTGVAEF 209
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALCRYKNVQDAEHL+ + FPF TKSFNI+LNGWCNI+ S REA+R W M +
Sbjct: 210 HGLLSALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGWCNIVCSLREAKRFWSSMER 269
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+GI DVVS+ +ISC+SKA +LH V++LF+ M G+ DRKVYNA++ ALAKGR VK
Sbjct: 270 KGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNAIVFALAKGRCVKA 329
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L+++MEEK VAP+ T+NSLI PLCKAR++ EA + FD ML+RG+SP++RT+HA L+
Sbjct: 330 AKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLN 389
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ R EVF LL+ M+++ C+P DTYIMLI+KF RWRQ +V K+W+ + NG PDRS
Sbjct: 390 VARNSTEVFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHESVEKLWSAMPANGLSPDRS 449
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+Y LIH LFLNG+LEEA +YY EMK K PE KT+E++ W ++ +
Sbjct: 450 AYIVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEKKTEEMITAWLEGRELAK 500
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+++A SME KG+ +VV+Y S+I KA L + F+ M + G++P + Y+A
Sbjct: 257 LREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNA 316
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G V ML++ + E P
Sbjct: 317 IVFALAKGRCV----------------KAAKMLVRT----------------MEEKQVAP 344
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
D +++ +LI L +++EA + + M E+ L P +T L + + N V + +
Sbjct: 345 DTATFNSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLNVARNSTEVFDLLDKM 404
Query: 439 KAHQPQSGQNTRVI 452
K Q + +T ++
Sbjct: 405 KQLQCEPEMDTYIM 418
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/296 (66%), Positives = 239/296 (80%), Gaps = 14/296 (4%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
MS+RGI +DVVS++ ++SCYSKA +L++VLRL+ QMK++GIE DRKVYNAVIHALAKGRL
Sbjct: 1 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A +LMK+MEEKGVAPN+VTYNSLIKPLC+ARK++EA+ AFD+ML+R ISPTIRTYHA
Sbjct: 61 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA 120
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
FL I+RTGEEVF LLE MRKMGCQP NDTYIMLI+KF RWRQ NVFK+W+E+SENG P
Sbjct: 121 FLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISP 180
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
DRSSY LIH LFLNG+L+ AH+YY EMKEKQLLPEPK DE+LQ W NKQ E Q
Sbjct: 181 DRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPKIDEMLQTWLSNKQIAEGQTTES 240
Query: 439 KAHQ-------------PQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGFSFWE 481
+++Q QS + TR I K+S +R F++Q ETR+VVR +GFSFWE
Sbjct: 241 RSNQCQTTELRSNQLDCSQSREQTRDIPKRS-HERNFIRQAETRKVVRERGFSFWE 295
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/418 (41%), Positives = 248/418 (59%), Gaps = 4/418 (0%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
E R +++CG S LV ++L ++ D +AAF F WAG Q Y+H+ YHTMI+ILG
Sbjct: 125 EARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVYHTMISILG 184
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
RKFD W LI +M ++V +QTL+I+I+RY A HD +AI F+A +FK A
Sbjct: 185 VHRKFDKGWGLIRKMHER----AMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAA 240
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+DF LL ALCR V++AE L+ NK +P TKSFN+IL GWCNI + +R+W
Sbjct: 241 DSDDFLCLLCALCRNMFVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLW 300
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EMS I D S++ +I C+SKA + V+RL+D+MK+ G + KVYNAVI+ L+K
Sbjct: 301 EEMSNLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKE 360
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
R VK+A++L + E G PN VTY LI LC+ K +EA D+M+ G PTI Y
Sbjct: 361 RCVKEALNLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIY 420
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
HAF + + L + M + GC PT +TYIM I++ W + N FK+WN++ ++
Sbjct: 421 HAFFRFVENEGAICKLFDKMFENGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWF 480
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
D S + L++ LNGK EEA + Y EMK EPK D++ + W+ ++ Q
Sbjct: 481 SADSSIHYLLLNGFLLNGKPEEACKCYREMKVNGFSLEPKIDKMFESWNVGRKHSSLQ 538
>gi|293332689|ref|NP_001168961.1| hypothetical protein [Zea mays]
gi|223974035|gb|ACN31205.1| unknown [Zea mays]
gi|413921836|gb|AFW61768.1| hypothetical protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 218/362 (60%), Gaps = 7/362 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G +H + GK R+FD AW ++ MR ++T + ++IL+ RY A +
Sbjct: 130 AGLPPPPEAWHLAVWAAGKARRFDLAWEIVRRMRNR----GVLTCRVMVILMERYAAASE 185
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
V +AI F ++FK F LL ALC+ KN++DAE L+F K FP + FNII
Sbjct: 186 VNKAIKTFDVMEKFKIESDQSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTAEGFNII 245
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+GWCN+I EA+RVW EMS I D +S++ +ISC+SK NL LR++D+MK+ G
Sbjct: 246 LDGWCNVITDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKRG 305
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
VYN++++ L + VKDA ++ + ++G+ P+V TYN++I PLC++ KLDEAR
Sbjct: 306 WIPGIVVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEAR 365
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ + M+ RGI PTI TYHAFL + G +E LL+ M++ GC P +DT++MLI KF
Sbjct: 366 KVMESMILRGIVPTISTYHAFLK--QEGIDESLKLLQKMKEDGCGPKSDTFVMLIDKFFL 423
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ GN +VWNE+ + P R+ Y L+ L +G + A +YY EMKEK + +
Sbjct: 424 LNESGNALRVWNEMRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEMKEKGFASDTQL 483
Query: 418 DE 419
D+
Sbjct: 484 DK 485
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 241/422 (57%), Gaps = 2/422 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A ++ +L+ S +++ + + + + +++ VL R++W+ A FF WA G
Sbjct: 88 ASEVLKVLKSTSADNADLSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFNWAATLPG 147
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAH +R Y M+ ILG+++K L DE+ E +VT + +L+ RY H V
Sbjct: 148 YAHGSRAYTEMLDILGRMKKVRHMRQLFDEI-PEERRVVVVTNKMFAVLLNRYAGAHKVQ 206
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
AI FY K + F + + FQ LL +LCRYK+V++AE L KD FP TKS+NIILN
Sbjct: 207 EAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILN 266
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWC + GS R+A+R+W ++ + D+ ++ I+ +K + ++LF +M GI
Sbjct: 267 GWC-VKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGIN 325
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D + N +I L + +A+ + M ++ +V TYN+LIK LCK +++++ +
Sbjct: 326 PDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYEL 385
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
D+M +G SP RTY L ++V L++ M + GC+ +DTY +++ ++ W+
Sbjct: 386 LDDMEAKGCSPNNRTYSYVLKTTEKPKDVIALMQRMEQTGCELDSDTYNLILNLYTNWKY 445
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
V +VW+E+ NG+GPD+ S+T ++H L GKL+EA QYY MK + ++PEP+T L
Sbjct: 446 EKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRTKIL 505
Query: 421 LQ 422
++
Sbjct: 506 VK 507
>gi|115475660|ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|37806221|dbj|BAC99723.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|37806377|dbj|BAC99889.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623395|dbj|BAF23340.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|125602810|gb|EAZ42135.1| hypothetical protein OsJ_26694 [Oryza sativa Japonica Group]
Length = 528
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 231/401 (57%), Gaps = 20/401 (4%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLW-------AGKQSGYAHS----TREYHTMIAILGKVRK 80
+L+ L +R D +AA W AG+++G +H I GK R+
Sbjct: 99 DLLVRALWELRRDPDAAALALRWGEEGCAAAGERAGPPPPPPPPAEAWHLTIWAAGKARR 158
Query: 81 FDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
FD AWA++ M RG ++T + ++I++ RY A ++V +AI F A ++FK
Sbjct: 159 FDLAWAVVRRMLRRG------VLTSRAMVIVMERYAAANEVNKAIKTFDAMEKFKTEADQ 212
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F LL ALC+ KN++DAE L+ K FP + FNIIL+GWCN+I EA+R+W E
Sbjct: 213 TVFYSLLRALCKNKNIEDAEELLLVRKKFFPLTAEGFNIILDGWCNVITDIAEAKRIWRE 272
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
MS I D S++ ++SC++K NL LR++D+MK+ G VYN++I+ L K
Sbjct: 273 MSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSLIYVLTKENC 332
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+KD ++ + ++G+ PNV TYNS+I PLC++RKLDEAR ++M+ +GI PTI TYH
Sbjct: 333 MKDVQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLKGIVPTILTYHT 392
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
FL +E L+ M+ GC P +DT++MLI +F + + G+ K+WNE+ P
Sbjct: 393 FLR-QENIDETLKFLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWNEMKRYDIRP 451
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
S Y +++ L +G ++ A +YY EMKE +PK ++
Sbjct: 452 SYSHYMSVVQGLIKHGCMQRALEYYDEMKENGFASDPKLEK 492
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 222/372 (59%), Gaps = 7/372 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G +H + GK R+FD AWA++ MR ++T + ++IL+ RY A ++
Sbjct: 130 AGLPPPADAWHLAVWAAGKARRFDLAWAVVRRMRNR----GVLTGRAMVILMERYAAANE 185
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
V +A+ F ++FK F LL ALC+ KN++DAE L+ K FP + + FNII
Sbjct: 186 VNKAVKTFDVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELLLLRKKFFPLSAEGFNII 245
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+GWCN+I EA+RVW EMS I D +S++ +ISC+SK +L LR++D+MK+ G
Sbjct: 246 LDGWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKKRG 305
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
VYN++++ L + VKDA ++ + ++G+ P+V TYNS+I PLC++ KLDEAR
Sbjct: 306 WIPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEAR 365
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ M+ +GI PTI TYHAFL + G +E LL+ M++ GC P +DT++ML KF
Sbjct: 366 VVMESMILKGIVPTISTYHAFLK--QEGIDESLKLLQKMKEDGCGPKSDTFLMLFDKFFL 423
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ GN +VWNE+ + P RS Y ++ L +G + A +YY EMKEK + +
Sbjct: 424 LNESGNALRVWNEMRKYKISPVRSHYMTVVEGLVKHGCIPRALEYYDEMKEKGFASDTQL 483
Query: 418 DELLQDWSYNKQ 429
D+ + + N +
Sbjct: 484 DKEFKTFLLNNR 495
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 239/422 (56%), Gaps = 2/422 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A ++ +L+ S +++ + + + + +++ VL R++W+ A FF WA G
Sbjct: 80 ASQVLKVLKSTSADNTDLSGALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPG 139
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAH +R Y M+ ILG+++K L DE+ E +VT + +L+ RY H V
Sbjct: 140 YAHGSRAYTEMLDILGRMKKVRHMRQLFDEI-PEERRQVVVTNKMFAVLLNRYAGAHKVQ 198
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
AI FY K + F + + FQ LL +LCRYK+V++AE L KD FP TKS+NIILN
Sbjct: 199 EAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILN 258
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWC + GS R+A+R+W ++ + D+ +F I+ +K + ++LF QM GI
Sbjct: 259 GWC-VKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGIN 317
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D + N +I L + + +A+ + M ++ +V TYN+LIK +CK +++++ +
Sbjct: 318 PDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYEL 377
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
D+M +G P RTY L ++V L++ M + GC+ +D Y +++ + +W+
Sbjct: 378 LDDMEAKGCPPNNRTYSYILKTTEKPKDVIALMQRMERTGCKLDSDIYNLILNLYIKWKY 437
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ ++W+E+ G+GPD+ S+T ++H L GKL+EA QYY MK + ++PEP+T L
Sbjct: 438 EKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRTKIL 497
Query: 421 LQ 422
++
Sbjct: 498 VK 499
>gi|255543335|ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547741|gb|EEF49233.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 552
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 234/403 (58%), Gaps = 7/403 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
I+ G+K + LV V+ +R DW+ AF F W K + E ++ ILG RKF
Sbjct: 114 IDGSGVKANINLVYSVIWELRKDWKLAFLGFKWGEKWGCIDEKSCE--LIVWILGNHRKF 171
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
+ AW +I +M S+ +QT+LI+I RY A + G+AI F ++FK A E F
Sbjct: 172 NNAWIVIRDMHQL----SMNIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAF 227
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L++ALC + +++AE M NK +FP T+ FN+ILNGWC+I + EA+RVW EMS+
Sbjct: 228 YSLMNALCNHGYIEEAEEFMVVNKKLFPLETEGFNVILNGWCSICVNLLEAKRVWREMSK 287
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
I + S++ +ISC+SK NL LRL+D+MK+ G +VYN++I+ L + K+
Sbjct: 288 CCITPNATSYTHMISCFSKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKE 347
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ + M+E G+ P+ TYNS+I+PLC+ +KL EAR M++ ISPT+ TYHA L+
Sbjct: 348 ALRFLDKMKEVGLQPDSTTYNSMIRPLCEGKKLVEARSVLATMIEENISPTMETYHALLE 407
Query: 322 IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ + E +L M G PT+DT+++++ KF + Q N K+W E+ + P+
Sbjct: 408 VENSDFEATLEVLNRMTVAGLAPTDDTFLLVLAKFFKLEQAENALKMWIEMKQYEVTPNL 467
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ Y L+ L G L +A + Y +M+ +PK ++L++
Sbjct: 468 THYKILVEGLVRCGLLAKARECYADMRSNGFTDDPKLQKMLKE 510
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 238/417 (57%), Gaps = 2/417 (0%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A ++++L+ S +++ + + + + +++ VL R++W+ A FF WA G
Sbjct: 80 ASQVLNVLKSTSADNADLSGVLHQFMVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPG 139
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YAH +R Y M+ ILG+++K L DE+ E +VT + +L+ RY H V
Sbjct: 140 YAHGSRAYTEMLDILGRMKKVRHMRQLFDEI-PEERRQVVVTNKMFAVLLNRYAGAHKVQ 198
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
AI FY K + F + + FQ LL +LCRYK+V++AE L KD FP TKS+NIILN
Sbjct: 199 EAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILN 258
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWC + GS R+A+R+W ++ + D+ +F I+ +K + ++LF QM GI
Sbjct: 259 GWC-VKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGIN 317
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D + N +I L + + +A+ + M ++ +V TYN+LIK +CK +++++ +
Sbjct: 318 PDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYEL 377
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
D+M +G SP RTY L ++V L++ M + GC+ +D Y +++ + +W+
Sbjct: 378 LDDMEAKGCSPNNRTYSYILKTTEKPKDVIALMQRMERSGCKLDSDMYNLILNLYIKWKY 437
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++W+E+ G+GPD+ S+T ++H L GKL+EA QYY MK + ++PEP+T
Sbjct: 438 EKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT 494
>gi|298204688|emb|CBI25186.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 236/408 (57%), Gaps = 7/408 (1%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+E+ ++ G++ + ELV + +R DW A+ F W K +S R +I IL
Sbjct: 96 AEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWG--CNSERTRGLVIWIL 153
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G +KF AW LI E+ S+ T++ +LI+I RY A +D +AI F+ ++F+ +
Sbjct: 154 GNCKKFGVAWCLIRELHRS----SVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLS 209
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
E F LL+ALC++ NV+DAE LMF NK +FP T+ FNIILNGW N+ EA+R+
Sbjct: 210 PDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVSLDIFEAKRI 269
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W EMS+ I + +++ +ISC+SK NL LRLFD MK+ G +VYN++I+ L
Sbjct: 270 WREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTH 329
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A+ ++ ++E G+ + +YN +I+PLCKA+KL+EAR M+ + PT T
Sbjct: 330 ENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTET 389
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
YHAFL+ + EE F +L+++R G P DT+++++ + Q N K+W E+ +
Sbjct: 390 YHAFLEGA-SYEETFEVLKNLRTAGFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFD 448
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P Y LI L G L +A + Y EM+ K L +PK +LL+D
Sbjct: 449 VVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKLKKLLKD 496
>gi|225443152|ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Vitis vinifera]
Length = 537
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 236/408 (57%), Gaps = 7/408 (1%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+E+ ++ G++ + ELV + +R DW A+ F W K +S R +I IL
Sbjct: 96 AEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWG--CNSERTRGLVIWIL 153
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G +KF AW LI E+ S+ T++ +LI+I RY A +D +AI F+ ++F+ +
Sbjct: 154 GNCKKFGVAWCLIRELHRS----SVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLS 209
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
E F LL+ALC++ NV+DAE LMF NK +FP T+ FNIILNGW N+ EA+R+
Sbjct: 210 PDQEAFYTLLTALCKHGNVEDAEELMFQNKKLFPLETEGFNIILNGWSNVSLDIFEAKRI 269
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W EMS+ I + +++ +ISC+SK NL LRLFD MK+ G +VYN++I+ L
Sbjct: 270 WREMSKCCIVPNATTYTLMISCFSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTH 329
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A+ ++ ++E G+ + +YN +I+PLCKA+KL+EAR M+ + PT T
Sbjct: 330 ENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTET 389
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
YHAFL+ + EE F +L+++R G P DT+++++ + Q N K+W E+ +
Sbjct: 390 YHAFLEGA-SYEETFEVLKNLRTAGFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFD 448
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P Y LI L G L +A + Y EM+ K L +PK +LL+D
Sbjct: 449 VVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKLKKLLKD 496
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 239/424 (56%), Gaps = 9/424 (2%)
Query: 2 KTLVDILREFSHKRSEMRN--KIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS 59
K L+D++R+ S SE +E+ ++ + ++ +R++W AF F W K+
Sbjct: 92 KGLIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRG 151
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
+ MI +LG +KF+ AW LI +M S T++ + +++ RY A +D
Sbjct: 152 --CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTRKAMFLMMDRYAAANDT 205
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+AI F +FK E FQGLL ALCR+ +++ AE M +K +FP + + FN+IL
Sbjct: 206 SQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVIL 265
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NGWCNI EA+R+W EM I + S+S +ISC+SK NL LRL+D+MK+ G+
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+VYN++++ L + +A+ LMK + E+G+ P+ VTYNS+I+PLC+A KLD AR
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+ +SPT+ T+HAFL+ + E+ +L M+ PT +T+++++ K + +
Sbjct: 386 VLATMISENLSPTVDTFHAFLEAVNF-EKTLEVLGQMKISDLGPTEETFLLILGKLFKGK 444
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
Q N K+W E+ + + Y A I L G LE+A + Y EMK K + P +
Sbjct: 445 QPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQK 504
Query: 420 LLQD 423
LL++
Sbjct: 505 LLEE 508
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 244/450 (54%), Gaps = 9/450 (2%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA---GKQSGYAHSTREYHTMI 72
SE+ + +C + ++ +LV +VL R+DW A+ FF WA G +SGY+ ++ ++
Sbjct: 103 SEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEIL 162
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
ILG++R+F L DEM + L ++T +L+ RY A H A+ FY K
Sbjct: 163 DILGRMRRFHEMTQLFDEMSKRK---GLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGL 219
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
F + + FQ LL +LCRYK+V+ AE L K+ FP + KS N+ILNGWC ++GS REA
Sbjct: 220 GFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWC-VLGSLREA 278
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+R W ++ D ++ I+ +KA L ++LF M G D + N +I A
Sbjct: 279 KRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDA 338
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L + + +A+ +++ M E+ P+V TYNSLIK LCK ++ ++ + D+M Q+G P
Sbjct: 339 LCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPN 398
Query: 313 IRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
RTY L + EEV G+LE M + GC+ +D Y +++K + W + +E+
Sbjct: 399 ARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEME 458
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
NG GPD+ +YT +IH L+ G++++A Y+ +M ++PEP+T L+ + N + E
Sbjct: 459 RNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVN--AMNIKLKE 516
Query: 433 RQIASLKAHQPQSGQNTRVISKKSDQDREF 462
R+ + R + + + R F
Sbjct: 517 REAEPEGKGARNKADSIRPSTXRGKKKRAF 546
>gi|357145431|ref|XP_003573640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Brachypodium distachyon]
Length = 523
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 220/388 (56%), Gaps = 18/388 (4%)
Query: 41 VRNDWEAAFTFFLW-------AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-- 91
+R D EAA W +G + + +H I GK +FD AWA + M
Sbjct: 110 LRRDPEAAALAIRWGEYCSASSGAEGAGSPPAEAWHLAIWAAGKAGRFDLAWAAVRRMLH 169
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RG ++T++ ++I++ RY A ++ +A+ F ++FK F LL ALC+
Sbjct: 170 RG------VLTRRAMIIVMERYAAASELEKALKTFDVMEKFKVQADQAVFYSLLRALCKS 223
Query: 152 KNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
KN++DAE L+ K FP + FNIIL+GWCNII EA+RVW EMS I D S+
Sbjct: 224 KNIEDAEELLLMRKKFFPLTAEGFNIILDGWCNIIIDVAEAKRVWKEMSSYCITPDGTSY 283
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ ++SC+SK NL LR++D+MK+ G VYN++++ L + +KDA + + +
Sbjct: 284 TLMVSCFSKVGNLFDTLRVYDEMKKRGWTPGIGVYNSLVYVLTRENCMKDAKKIFSKIID 343
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-EEVF 330
+G+ NV TYNS+I PLC++ KLDEAR +M+ +GI PTI TYHAFL + G +E
Sbjct: 344 EGLQLNVETYNSMIIPLCESCKLDEARIMMGDMIMKGIVPTILTYHAFLK--QEGVDETL 401
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL M++ GC P +DT++MLI KF + + GN +VWNE+ P S Y A+I L
Sbjct: 402 QLLRKMKENGCGPNSDTFLMLIDKFIQANESGNALRVWNEMIRYDISPAYSHYMAVIQGL 461
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+G + A +YY EMK K +P D
Sbjct: 462 VKHGCIPRALEYYDEMKAKGFASDPILD 489
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 249/442 (56%), Gaps = 8/442 (1%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+E ++E GI+ + LV V+ +R +W AF F W K E M+ +L
Sbjct: 9 AEAMASLDESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWGCVDEKACE--LMVWVL 66
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G RKF+TAW LI ++ + T++ +LI+I RY A + G+AI AF +F+
Sbjct: 67 GNHRKFNTAWILIRDLHRS----LMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMT 122
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
E F LL+ LC+ N+++AE M NK FP + FNIILNGWCNI EA+R+
Sbjct: 123 PDEEAFYFLLNVLCKNGNIEEAEEFMLVNKKFFPLEVEGFNIILNGWCNICVDVFEAKRI 182
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W EMS+ I D +++ +ISC+SK NL LRL+D MK+ G +VYN++++ L +
Sbjct: 183 WREMSKYCIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTR 242
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
K+A+ ++ M+E G+ + TYNS+I+PLC+A+KL++AR M++ +SPTI T
Sbjct: 243 ENCFKEALKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEENVSPTIET 302
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
YHAFL I EE F +L+ M+ G PT DT+++L+ KF + Q N K+W E+ +
Sbjct: 303 YHAFLQGI-VFEETFEVLDRMKIAGLGPTEDTFLLLLAKFFKLEQPENALKIWVEMKQYE 361
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+ + YT ++ L G L +A +YY EM+ +PK ++L+ +K +++
Sbjct: 362 VASNLTHYTVMVEGLARCGLLTKAREYYAEMRSNGYSDDPKIQKMLKVPVQDKNDKRKKL 421
Query: 436 AS-LKAHQPQSGQNTRVISKKS 456
K +Q S + ++ +KS
Sbjct: 422 GGQFKRNQHVSHKKGSMVRRKS 443
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 223/395 (56%), Gaps = 2/395 (0%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
++ ++V VL R++W+ A FF WA YAH R Y M+ ILG+++K L
Sbjct: 109 EMDEDVVLRVLQKQRSNWQVALLFFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQL 168
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
DE+ G +VT +T +L+ RY H V AI FY K + F V + FQ LL +
Sbjct: 169 FDEIPEERRG-LVVTNRTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMS 227
Query: 148 LCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
LCRYK+V++AE L KD FP KS+NIILNGWC + GS +A+R+W ++ + D
Sbjct: 228 LCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWC-VKGSLPDAKRIWNQIIASKLKPD 286
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ ++ I+ +KA L ++LF M GI D + N +I L + + +A+ + +
Sbjct: 287 LFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFR 346
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M ++G +V TYN+LIK CK R+ ++ + D+M +G SP TY L +
Sbjct: 347 EMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPK 406
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+V LL+ M K GC+ +DTY +++ + + V +VW+E+ NG+GPD+ S+T ++
Sbjct: 407 DVIHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMV 466
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
H L G+L++A QYY MK + + PEP+T L++
Sbjct: 467 HGLHSQGRLDQALQYYTTMKSRGMTPEPRTRILVK 501
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 254/465 (54%), Gaps = 24/465 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA---GKQSGYAHSTREYHTMI 72
SE+ + +C + ++ +LV +VL R+DW A+ FF WA G +SGY+ ++ ++
Sbjct: 103 SEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEIL 162
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
ILG++R+F L DEM + LV ++T +L+ RY A H A+ F K
Sbjct: 163 DILGRMRRFHEMTQLFDEMSKRK---GLVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGL 219
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
F + + FQ LL +LCRYK+V+ AE L K+ FP + KS N+ILNGWC ++GS REA
Sbjct: 220 GFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWC-VLGSLREA 278
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+R W ++ D ++ I+ +KA L ++LF M G D + N +I A
Sbjct: 279 KRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDA 338
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L + + +A+ +++ M E+ P+V TYNSLIK LCK ++ ++ + D+M Q+G P
Sbjct: 339 LCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPN 398
Query: 313 IRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
RTY L + EEV G+LE M + GC+ +D Y +++K + W + +E+
Sbjct: 399 ARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEME 458
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
NG GPD+ +YT +IH L+ G++++A Y+ +M ++PEP+T L+ + N + E
Sbjct: 459 RNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVN--AMNIKLKE 516
Query: 433 RQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
R+ +P+ G+ R K+D R P TRR + + F
Sbjct: 517 REA------EPE-GKGAR---NKADSIR-----PSTRRGKKKRAF 546
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 231/407 (56%), Gaps = 2/407 (0%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
SE+ + + ++ ++V +VL R++W+ A +FF WA Y H +R Y M+ IL
Sbjct: 97 SELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDIL 156
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+++K L DE+ E+ S++T + +L+ RY H V AI+ FY K + F
Sbjct: 157 GRMKKVRLMRQLFDEI-PMESRQSVITNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFE 215
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + FQ LL +LCRYK+V++AE L KD FP KS+NIILNGWC + GS +A+RV
Sbjct: 216 LDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWC-VKGSLADAKRV 274
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E+ + D+ ++ I+ +K+ L ++LF M GI D + N +I L
Sbjct: 275 WNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCF 334
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ + +A+ + M ++G +V TYN+LIK CK ++++ + D+M +G+SP T
Sbjct: 335 KKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMT 394
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
Y L ++V L++ M K GC+ +DTY +++ + W V VW+E+ NG
Sbjct: 395 YSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 454
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+GPD+ S+T ++H L +GKL+EA YY M+ + + PEP+T L++
Sbjct: 455 SGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTPEPRTKLLVK 501
>gi|297839849|ref|XP_002887806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333647|gb|EFH64065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 235/424 (55%), Gaps = 13/424 (3%)
Query: 4 LVDILREFSHKRSEM--RNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
L+D++R S SE +EE ++ + ++ +R +W AF F W K+
Sbjct: 88 LIDLIRHVSELESEADAMASLEESSFDLNHDSFYSLIWELREEWRLAFLAFKWGEKRG-- 145
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
+ MI +LG +KF+ AW LI +M S T++ + +++ RY A +D +
Sbjct: 146 CDDQKACDLMIWVLGNHQKFNIAWCLIRDM----FHVSKDTRKAMFLMMDRYAAANDTIQ 201
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
AI F +FK E FQGLL ALCR+ +++ A+ M +K +FP + + FNIILNG
Sbjct: 202 AIRTFDIMDKFKHTPDDEAFQGLLYALCRHGHIEKAQEFMLASKKLFPVDVEGFNIILNG 261
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WCNI EA+R+W EM I + S+S +ISC+SK NL LRL+D+MK+ G+
Sbjct: 262 WCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAP 321
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
VYN++++ L + +A+ L++ M+E+G+ P VTYNS+I+PLC+A KLD AR
Sbjct: 322 GIVVYNSLLYVLTRENCFHEAMKLLEKMDEEGLKPGSVTYNSMIRPLCEAGKLDVARNVL 381
Query: 302 DEMLQRGISPTIRTYHAFLDIIR--TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+ +SPT+ T+HAFL+ + T EV G M+ G PT DT+++++ K + +
Sbjct: 382 ATMISENLSPTVDTFHAFLEAVNFDTNLEVLG---QMKVSGLGPTEDTFLLILGKLFKGK 438
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
Q N K+W E+ + + Y A + L G LE+A + Y EMK K P +
Sbjct: 439 QPENALKIWAEMDRFEIVANPALYLATVQGLLSCGWLEKAREIYSEMKSKGFPGNPMLQK 498
Query: 420 LLQD 423
LL++
Sbjct: 499 LLEE 502
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 230/407 (56%), Gaps = 2/407 (0%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
SE+ + + ++ ++V +VL R++W+ A +FF WA Y H +R Y M+ IL
Sbjct: 77 SELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDIL 136
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+++K L DE+ E+ S+VT + +L+ RY H V AI+ FY K + F
Sbjct: 137 GRMKKVRLMRQLFDEI-PVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFE 195
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + FQ LL +LCRYK+V++AE L KD FP KS+NIILNGWC + GS +A+RV
Sbjct: 196 LDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWC-VKGSLADAKRV 254
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E+ + D+ ++ I+ +K+ L ++LF M GI D + N +I L
Sbjct: 255 WNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCF 314
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ + +A+ + M ++G +V TYN+LIK CK ++++ + D+M +G+SP T
Sbjct: 315 KKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMT 374
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
Y L ++V L++ M K GC+ +DTY +++ + W V VW+E+ NG
Sbjct: 375 YSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 434
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+GPD+ S+T ++H L + KL+EA YY M+ + + PEP+T L++
Sbjct: 435 SGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRTKLLVK 481
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 230/407 (56%), Gaps = 2/407 (0%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
SE+ + + ++ ++V +VL R++W+ A +FF WA Y H +R Y M+ IL
Sbjct: 97 SELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDIL 156
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+++K L DE+ E+ S+VT + +L+ RY H V AI+ FY K + F
Sbjct: 157 GRMKKVRLMRQLFDEI-PVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFE 215
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + FQ LL +LCRYK+V++AE L KD FP KS+NIILNGWC + GS +A+RV
Sbjct: 216 LDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWC-VKGSLADAKRV 274
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E+ + D+ ++ I+ +K+ L ++LF M GI D + N +I L
Sbjct: 275 WNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCF 334
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ + +A+ + M ++G +V TYN+LIK CK ++++ + D+M +G+SP T
Sbjct: 335 KKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMT 394
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
Y L ++V L++ M K GC+ +DTY +++ + W V VW+E+ NG
Sbjct: 395 YSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNG 454
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+GPD+ S+T ++H L + KL+EA YY M+ + + PEP+T L++
Sbjct: 455 SGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRTKLLVK 501
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 229/402 (56%), Gaps = 7/402 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++E +K +LV + +R+DW+++ F W G++ G A + MI +LG +KF
Sbjct: 106 LDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKW-GEKVG-AIDEEICNLMIWVLGNHKKF 163
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
TAW+LI E+ G L + Q +L++I RY ++ +AI F+ ++F+ E F
Sbjct: 164 STAWSLIRELHGS----LLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAF 219
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL++LC+Y N+++AE MF NK +FP T+SFNIILNGWCN+ EA+R+W EMS+
Sbjct: 220 HVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWREMSK 279
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
I D S++ +ISC+SK NL LR +DQMK+ +VYN++ + L + +
Sbjct: 280 CCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNE 339
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ +++ ++E G+ P+ TYNSLI PLC+A KLDEA+ M + ISPTI TYH+F+
Sbjct: 340 ALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIETYHSFIQ 399
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ + F LL+ MR+ G PT T++++ K + VW E+ P
Sbjct: 400 AADS-KMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCE 458
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y+ LI L G L++A + Y EM + PK LL++
Sbjct: 459 HYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKE 500
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 219/395 (55%), Gaps = 2/395 (0%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
++ ++V +VL R++W+ A FF WA Y H R Y M+ ILG+++K L
Sbjct: 109 EIDEDVVLKVLQKQRSNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQL 168
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
DE+ G +VT + +L+ RY H V AI FY + F V + FQ LL +
Sbjct: 169 FDEIPEQRRG-LVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMS 227
Query: 148 LCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
LCRYK+V++AE L KD FP KS+NIILNGWC + GS +A+RVW E+ + D
Sbjct: 228 LCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWC-VKGSLPDAKRVWNEIIASKLKPD 286
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ ++ I+ +KA L ++LF M GI D + N +I L + + +A+ +
Sbjct: 287 LFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFG 346
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M ++G +V TYN+LIK CK R+ ++ + D+M ++G SP TY L
Sbjct: 347 EMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPR 406
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+V L++ M + GC+ +DTY +++ + + V +VW E+ NG+GPD+ S+T ++
Sbjct: 407 DVMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMV 466
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
H L G+L++A QYY MK + + PEP+T L++
Sbjct: 467 HGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILVK 501
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 242/431 (56%), Gaps = 18/431 (4%)
Query: 2 KTLVDILREFSHKRS----EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK 57
++ VD+ H R E+ +++CGI+++ ELV EV++ R+DW+ A+ K
Sbjct: 70 QSAVDVHNIIKHHRGSSPEEIERILDKCGIQLTEELVFEVVNRNRSDWKPAYILSRLIVK 129
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
S Y S+ Y+ ++ +LGK+R+F+ ++DEM + V ++T +L+ RY A H
Sbjct: 130 HSVYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRD---GFVDEKTYEVLLNRYAAAH 186
Query: 118 DVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
V A+ F + F GIED F GLL LCRYK+V+ AE L + F + +
Sbjct: 187 KVDEAVGVFERRREF----GIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIR 242
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ NIILNGWC ++G+ EA+R+W ++ DVVS+ +I+ +K L K + L+
Sbjct: 243 TMNIILNGWC-VLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRA 301
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G D K+ N VI AL + + +A+ + K M EKG +PNVVTYNSL+K LCK R+
Sbjct: 302 LWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRR 361
Query: 294 LDEARQAFDEMLQRG--ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
++ + +EM +G SP T+ L + ++V +LE M K C+ T+D Y ++
Sbjct: 362 TEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAVLERMAKNKCEMTSDLYNLM 421
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + +W V ++W E+ +G GPD+ +YT IH L GK+ EA Y+ EM K +
Sbjct: 422 FRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 481
Query: 412 LPEPKTDELLQ 422
+PEP+T+ LL
Sbjct: 482 VPEPRTEMLLN 492
>gi|356547476|ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Glycine max]
Length = 504
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 230/422 (54%), Gaps = 16/422 (3%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH 63
+++L++ +H S + G + + +L+ + +R +W+ A F W + + +
Sbjct: 64 FLELLKKVAHS-SPQAEGLHLSGFQANRDLICSAIWALREEWKPALLAFKW----NCHGN 118
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ + MI +L KF TAW +I +M SL T+Q +LI+I RY + ++ +AI
Sbjct: 119 DEKVCNLMIWVLTTHGKFSTAWCIIRDMHRS----SLSTRQAMLIMIDRYASANNSAKAI 174
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
F +F+ E F LL+AL +Y NV++AE M NK +FP NT+SFNIILNGWC
Sbjct: 175 QTFNFMDKFRLTPDQEAFHALLTALSKYGNVEEAEEFMLVNKKLFPLNTESFNIILNGWC 234
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
NI EA+RVW EMS+ I + S+S +ISC+S NL LRL+DQMK+ G
Sbjct: 235 NITKDVYEAKRVWREMSKYCITPNATSYSYMISCFSNEGNLFDSLRLYDQMKKRGWIPGI 294
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
++YN++++ L +K+A+ + ++E+G+ P T+NS+I PLC+A KL AR F+
Sbjct: 295 EIYNSLVYVLTHENCLKEALRTIDKLKEQGLQPGSATFNSMILPLCEAGKLAGARIIFNT 354
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQ 360
M++ +SPT TYHAF + G + G LE + +M G P D++++++ KF + +Q
Sbjct: 355 MVEENVSPTTETYHAFFE----GTDYQGTLEFLTRMKDSGLGPNKDSFVIILAKFLKLKQ 410
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
N K W E+ P Y ++ L +A +Y EM +PK + L
Sbjct: 411 PVNALKFWTEMKTYDVLPSCVHYRIMVEGLVTCRWFVKARDFYEEMVSNGCSADPKLNRL 470
Query: 421 LQ 422
Q
Sbjct: 471 FQ 472
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 227/404 (56%), Gaps = 10/404 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK----QSGYAHSTREYHTMIAILGKVRK 80
C + ++ + V +VL R+DW AF FF W K + + + Y+ ++ ILGK R+
Sbjct: 117 CDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRR 176
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F+ ++ EM + LV ++T +L+ RY A H V AI+ FY + F + +
Sbjct: 177 FEEVDKVLVEMSKRK---ELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIA 233
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
FQ LL LCRYK+V+ AE L K F + K+ NIILNGWC ++G+ EA+R W E+
Sbjct: 234 FQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWC-VLGNVHEAKRFWREII 292
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ D+ ++ +I+ +K L L+LF M G+ D + N +I AL + +
Sbjct: 293 ESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIP 352
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--PTIRTYHA 318
+A+ + K M E+G A NV TYN+LIK LCK R++++ + +EM +R S P T+
Sbjct: 353 EALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIY 412
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L +R EEV L + M + GC+ T+D Y ++++ + W V WNE+ E G GP
Sbjct: 413 LLGSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGP 472
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
DR SYT +IH L+ G+ ++ +Y+ EM K ++PEPKT++L+
Sbjct: 473 DRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVN 516
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 211/388 (54%), Gaps = 8/388 (2%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V + LS NDW+ A FF W Q G+ H+T Y+ MI ILGK +FD W LI M+
Sbjct: 181 VRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKA 240
Query: 94 GETG-PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P+ VT + +RY A H V A+NA+Y + F + L+ ALC YK
Sbjct: 241 DPVAYPNHVT---FRFVFKRYAAAHLVEEAMNAYYRTEEFNLR-DETSYSNLIDALCEYK 296
Query: 153 NVQDAEHLMFC-NKD-VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+V +AE L +KD VF + K +NIIL GW + G ++ W EM +RG+C + S
Sbjct: 297 HVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKM-GWWKKCREFWEEMDRRGVCKSLYS 355
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S + K+ + ++L+ +MK+ GI D YN VI A+ V +I + + M+
Sbjct: 356 YSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMK 415
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
E G PNVVTYN++IK LC+ ++ EA FD+M ++G +P + TYH F I +++
Sbjct: 416 EVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQIL 475
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ M G +P DTY+ML+KKF RW VF VW ++ E G PD +Y ALI AL
Sbjct: 476 RTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDAL 535
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
G ++ A +Y EM K L +P+ D
Sbjct: 536 VQKGMVDLARKYEEEMLAKGLSAKPRVD 563
>gi|356557209|ref|XP_003546910.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80880, mitochondrial-like [Glycine max]
Length = 504
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 233/425 (54%), Gaps = 18/425 (4%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH 63
+++L++ +H S+ + G + + +L+ + +R +W+ A F W S + +
Sbjct: 66 FLELLKKVTHS-SQQALGLHLSGFQANRDLICSAIWVLREEWKPALLAFKW----SCHGN 120
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ + MI +L KF TAW +I +M SL T+Q +LI+I RY + ++ +AI
Sbjct: 121 DEKVCNLMIWVLATHGKFSTAWCIIRDMHRS----SLSTRQAMLIMIDRYASANNSAKAI 176
Query: 124 NAFYAYKR--FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
F + F+ E F LL+ALC+Y+NV++ E M NK +F +T+ FNIILNG
Sbjct: 177 QTFNFMDKSDFRLTPDQESFHALLTALCKYRNVEEDEEFMLVNKKLFHLDTEGFNIILNG 236
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WCNI EA+RVW EMS+ I D S+S +ISC+SK NL LRL+DQMK+ G
Sbjct: 237 WCNITKDIYEAKRVWREMSKYCITPDATSYSYMISCFSKEGNLFDSLRLYDQMKKRGWIP 296
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
++YN++++ L +K+A+ + ++E+G+ P VT+NS+I LC+A KL EAR F
Sbjct: 297 GIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQPGSVTFNSMILSLCEAGKLAEARIIF 356
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRW 358
+ M++ +SPT TYHAF + G + G LE + +M G P+ D++++++ KF +
Sbjct: 357 NSMVEENVSPTTETYHAFFE----GTDYQGTLEFLTRMKDSGLGPSKDSFVIILAKFLKL 412
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+Q N K W E+ P Y ++ L +A +Y EM +P +
Sbjct: 413 KQPVNAPKFWTEMKTYDVLPSCVHYRIMVEGLVTCRWFIKARGFYEEMISNGCSADPMLN 472
Query: 419 ELLQD 423
L Q+
Sbjct: 473 RLFQE 477
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 228/403 (56%), Gaps = 6/403 (1%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ +LV +VL R+DW+ A+ FF W K+ + S+ Y+ ++ ILG++R+F+ ++
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVL 60
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
DEM E V + T +L+ RY H V AI AF + + + FQ LL L
Sbjct: 61 DEMSKRE---GFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYL 117
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
CRYK+V AE L+ F + K+ NI+LNGWC ++G+ REA+R W ++ DV
Sbjct: 118 CRYKHVDVAETLLHSKGHEFGVDIKTMNIVLNGWC-VLGNVREAKRFWKDIIASKCKPDV 176
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
++ I + L ++L++ M +M + D + N VI AL + V +A+++ +
Sbjct: 177 FTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEG 236
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--PTIRTYHAFLDIIRTG 326
M+E+G PNV TYNSLIK +CK ++++ + DEM ++ S P T++ L ++
Sbjct: 237 MKERGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKP 296
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EEV G+LE M+ GC+ NDT +L+K + W V W E+ +NG G DR SYT +
Sbjct: 297 EEVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIM 356
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
IH L+ G++E+A +Y+ EM+ K ++PEP+T L + KQ
Sbjct: 357 IHWLYDKGRVEDALRYFGEMENKGMVPEPRTKILCNSMNTRKQ 399
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 226/404 (55%), Gaps = 8/404 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHTMIAILGKVRK 80
+++CG ++ +LV +VL R+DW A FF WA K + GY S+ + ++ ILGK+++
Sbjct: 58 LDQCGFDLNHDLVLDVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIVDILGKMQR 117
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F ++DEM E L+ + L+RR+ H V AI FY K F + E
Sbjct: 118 FQELHQVLDEMSKRE---ELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEA 174
Query: 141 FQGLLSALCRYKNVQDAEHLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
F+ LL LCRYK+V+DAE L + K + K +N+ILNGWC ++G+S EA+RVW ++
Sbjct: 175 FRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWC-VLGNSHEAKRVWRDI 233
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
D+ +++ I +K L L+LF M G + D + N +I AL + +
Sbjct: 234 VASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRI 293
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--PTIRTYH 317
+A+ + M E+G PNV TYNSLIK +CK +++ + + DEM ++ S P TY
Sbjct: 294 PEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYC 353
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L ++ EV +LE M + GC +D Y M+++ + +W V K W E+ NG G
Sbjct: 354 YLLKSLKEPGEVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWG 413
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
PDR SYT +IH F G++++A +Y EM K ++PE +T++L+
Sbjct: 414 PDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVPERRTEKLV 457
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 236/427 (55%), Gaps = 10/427 (2%)
Query: 2 KTLVDILREFSHKRSEMRNKI----EECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK 57
++ +D+ H R KI ++CGI ++ ELV EV++ R+DW+ A+ K
Sbjct: 76 QSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVK 135
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS + S+ Y+ ++ +LGK+R+F+ + DEM + V ++T +L+ RY A H
Sbjct: 136 QSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRD---GFVNEKTYEVLLNRYAAAH 192
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
V A+ F K F + F GLL LCRYK+V+ AE L + F + K+ N+
Sbjct: 193 KVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNM 252
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
ILNGWC ++G+ EA+R W ++ DVVS+ +I+ +K L K + L+ M
Sbjct: 253 ILNGWC-VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D K+ N VI AL + + +A+ + + + EKG PNVVTYNSL+K LCK R+ ++
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 298 RQAFDEMLQRG--ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ +EM +G SP T+ L + ++V +LE M K C+ T+D Y ++ + +
Sbjct: 372 WELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLY 431
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+W + V ++W+E+ +G GPD+ +YT IH L GK+ EA Y+ EM K ++PEP
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Query: 416 KTDELLQ 422
+T+ LL
Sbjct: 492 RTEMLLN 498
>gi|125560868|gb|EAZ06316.1| hypothetical protein OsI_28549 [Oryza sativa Indica Group]
Length = 326
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 179/290 (61%), Gaps = 1/290 (0%)
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
++FK F LL ALC+ KN++DAE L+ K FP + FNIIL+GWCN+I
Sbjct: 2 EKFKTEADQTVFYSLLRALCKNKNIEDAEELLLMRKKFFPLTAEGFNIILDGWCNVITDI 61
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
EA+R+W EMS I D S++ ++SC++K NL LR++D+MK+ G VYN++
Sbjct: 62 AEAKRIWREMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSL 121
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+ L K +KDA ++ + ++G+ PNV TYNS+I PLC++RKLDEAR ++M+ +GI
Sbjct: 122 IYVLTKENCMKDAQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLKGI 181
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
PTI TYH FL +E LL+ M+ GC P +DT++MLI +F + + G+ K+WN
Sbjct: 182 VPTILTYHTFLR-QENIDETLKLLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWN 240
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
E+ P S Y +++ L +G +E A +YY EMKE +PK ++
Sbjct: 241 EMKRYDIRPSYSHYMSVVQGLIKHGCMERALEYYDEMKENGFASDPKLEK 290
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 218/402 (54%), Gaps = 6/402 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+ +C V+ +L+ +VL R+DW+ A FF W K + Y+ ++ ILGK+R+F
Sbjct: 71 LTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKVLMGSGAYNEILDILGKMRRF 130
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D ++D M E LV ++T +L+ RY A H V AI F + + + F
Sbjct: 131 DELSQVLDIMSKRE---GLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVSF 187
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
Q LL LCRYK+VQ AE L++ F + K+ NI+LNGWC ++G+ EA+R W ++
Sbjct: 188 QNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWC-VLGNVHEAKRFWKDIIG 246
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
D+ ++ I +K L L+++ M + D + N +I AL V +
Sbjct: 247 SKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPE 306
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--PTIRTYHAF 319
A+ + + M ++G PN TYNSLIK + R++++ + DEML + S P T++
Sbjct: 307 ALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYL 366
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L ++ EE+ +LE M + GC + DTY ++++ ++ W V WNE+ + G GPD
Sbjct: 367 LKALKKPEELPLVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPD 426
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
R SYT +IH L+ G++ +A Y+ EM K ++ EP+T+ L+
Sbjct: 427 RRSYTIMIHWLYEKGRINDALHYFGEMTSKGMVSEPRTEMLV 468
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 234/416 (56%), Gaps = 32/416 (7%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI ++ LV +VL R+DW+ AF FF W K + Y S Y+ +I ILGK++ F+
Sbjct: 92 GIHPNNNLVLQVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELH 151
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQG 143
++DEM + + ++T ILIRR+ A H + AIN FY + F ++ F+
Sbjct: 152 QVLDEMSQRK---EFINEETFCILIRRFVAAHKLEEAINIFYRREEFGLDNELDSKAFRT 208
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL +CRYK++++AE L N + F F + K++N+ILNGWC ++G++ EA+R+W
Sbjct: 209 LLMWMCRYKHIEEAETLFHRNLNKFRFCRDIKTWNVILNGWC-VLGNTHEAKRLWK---- 263
Query: 202 RGICYDVVSFSC--IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
D++++ C I +C+ + +D ++ + D ++N +I L + +
Sbjct: 264 -----DIIAYKCKEIGNCFEVVQ--------WD-VEEESCKPDVVIFNCLIDGLCFKKRI 309
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYH 317
+A+ + M+E+ PNV TYNSLIK L K R++++ + ++M +R P TY
Sbjct: 310 PEALQVFHDMKERDCLPNVATYNSLIKHLFKIRRMEKVYELVEDMERRSGDCLPNGVTYS 369
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L ++ EEV +LE M + GC ++D ++++ + +W + K W+E+ NG G
Sbjct: 370 YLLQSLKAPEEVPAVLERMERNGCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLG 429
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
PDR SYT +IH + NG+ ++A +Y+ EM K ++ EP+T++L+ S N Q ER
Sbjct: 430 PDRRSYTIMIHGHYENGRTKDAMRYFQEMTSKGIVLEPRTEKLV--ISMNGQLKER 483
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 204/385 (52%), Gaps = 10/385 (2%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V E LS NDW+ A FF W K+SG+ H+T ++ MI ILGK +F+T WALI+ M G
Sbjct: 10 VCEALSCYINDWQKALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIG 69
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
SL T I+ +RY H V AI+A+ F F L+ ALC +K+
Sbjct: 70 NPE--SLPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDTS-FYNLVDALCEHKH 126
Query: 154 VQDAEHLMFCNKDVFPF-----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
V +AE L F K+V NTK N+IL GW + G + + W +M G+ D+
Sbjct: 127 VVEAEELCF-GKNVIAHGFSVSNTKIHNLILRGWSKL-GWWGKCKEYWDKMDTEGVPKDL 184
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
S+S + K+ K ++L+ +MK I+ D YN VI A+ + V+ I + +
Sbjct: 185 FSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFRE 244
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
M E+G PNV T+N++IK LC+ ++ +A + DEM ++G P +Y + E
Sbjct: 245 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPSE 304
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ L M + G +P DTY+ML++KF RW V VW + E+G+ PD ++Y A+I
Sbjct: 305 ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVID 364
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
AL G L+ A +Y EM E+ L P
Sbjct: 365 ALIQKGMLDMAREYEEEMIERGLSP 389
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 214/417 (51%), Gaps = 19/417 (4%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
V V L+ ND++ A FF W + + HST Y+ ++ ILGK +F W LI
Sbjct: 74 VDHTTVRATLTSFNNDYKRALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLI 133
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR + SL T ++ +RY + H V A+N F F F L+ AL
Sbjct: 134 HRMR--QNPHSLPNHTTFRVMFKRYVSAHCVQDAVNTFQRLNEFNLK-DETSFSNLIDAL 190
Query: 149 CRYKNVQDAEHLMFCNK------------DVFPF---NTKSFNIILNGWCNIIGSSREAE 193
C YK+V +A+ L+F +K D F NTK FNI+L GW + G +
Sbjct: 191 CEYKHVLEAQDLVFGDKKNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKL-GWWSKCW 249
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
W EM +RG+ D+ S+S + SK K ++LF +MKR GI+ D VYN VI A+
Sbjct: 250 EFWDEMDRRGVEKDLHSYSIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAI 309
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ V +I + M++ G+ P VVTYN++I+ LC + + EA M + G SP
Sbjct: 310 GVSQGVDFSIRMFCEMKDLGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNA 369
Query: 314 RTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+Y F + + + L + M + G +PT DTY+ML+KKF+RW VF VWN + E
Sbjct: 370 VSYQCFFACLEKPKFIIELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEE 429
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQF 430
G PD S+Y ALI AL G ++ A +Y EM K L P+P+ + + + Y+ Q+
Sbjct: 430 LGCSPDASAYNALIDALVEKGLIDMARKYDEEMLAKGLSPKPRKELGTKPYVYSLQW 486
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 215/404 (53%), Gaps = 12/404 (2%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
++ R++ EE + V E L+ NDW+ A FF W ++SG+ H+T ++ +I IL
Sbjct: 32 AKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDIL 91
Query: 76 GKVRKFDTAWALIDEMRGG-ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
GK +F+ +WALI+ M G E+ P+ VT I+ +RY H V AI+A+ F
Sbjct: 92 GKYFEFEISWALINRMIGNTESVPNHVT---FRIVFKRYVTAHLVQEAIDAYDKLDDFNL 148
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP-----FNTKSFNIILNGWCNIIGSS 189
F L+ ALC +K+V +AE L F K+V NTK N+IL GW + G
Sbjct: 149 R-DETSFYNLVDALCEHKHVVEAEELCF-GKNVIGNGFSVSNTKIHNLILRGWSKL-GWW 205
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+ + W +M G+ D+ S+S + K+ K ++L+ +MK ++ D YN V
Sbjct: 206 GKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTV 265
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I A+ + V+ I + + M E+G PNV T+N++IK LC+ ++ +A + DEM +RG
Sbjct: 266 IRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGC 325
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
P TY + E+ L M + G +P DTY+ML++KF RW V VW
Sbjct: 326 QPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWK 385
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ E+G+ PD ++Y A+I AL G L+ A +Y EM E+ L P
Sbjct: 386 TMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 213/412 (51%), Gaps = 12/412 (2%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
H S N + + + S V + LS NDW+ A FF W +S + H+T Y+ MI
Sbjct: 28 HFHSRTPNPPQSDPLNLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMI 87
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
ILGK +FD +W LI MR S T +L RY + H V A++ + R
Sbjct: 88 DILGKFFEFDLSWDLIQRMRNNPF--STPNHTTFRVLFHRYISAHLVNEAVSVYE--DRL 143
Query: 133 KFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFN---TKSFNIILNGWCNII 186
K G++D + L+ ALC YK+V +A L F N + TK +N+IL GW +
Sbjct: 144 K-EFGLKDETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKM- 201
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + W EM ++ +C D+ S+S + K+ K ++L+ +MK GI+ D Y
Sbjct: 202 GWWGKCREFWEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAY 261
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N VI+A+ V + + + M E G PNVVT N++IK LC+ ++ EA + DEM Q
Sbjct: 262 NTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQ 321
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
I+P + TYH F + +E+ L + M + G P DTY+ML++KF RW VF
Sbjct: 322 SYIAPDVFTYHCFFRCLEKPKEILCLFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFL 381
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
VW ++ + G PD +Y ALI AL G ++ A +Y EM K L +P+ +
Sbjct: 382 VWKKMEKLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAKGLSAKPRVE 433
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 220/432 (50%), Gaps = 9/432 (2%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
IL +F ++ + K++ LV +VL +N +A FFLWA + G+ HS
Sbjct: 56 ILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKE 115
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
YH ++ ILG ++F W + +MR ET + + ++ R YC + G AI AF
Sbjct: 116 SYHILVDILGSSKQFPLIWDFLSDMR--ETRCCEICPEIFWLIFRAYCRANLPGDAIRAF 173
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNI 185
+ F G+ D LL LC+ K+V+ A+ N +V P N K+++I++ GW ++
Sbjct: 174 HQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDV 232
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G S EA +++ EM +RG DVV+++ ++ K N+ + +LF +M G+ D
Sbjct: 233 -GDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACS 291
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ I A + + A ++ M + PNV TYN ++K LCK+ K+DEA Q DEM+
Sbjct: 292 YSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMI 351
Query: 306 QRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+RG+SP + +Y+A EV L+ M K C P TY M++K R +F
Sbjct: 352 ERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFD 411
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V VW + E G P S+Y ++H GKLEEA +Y+ M + + P T ELL
Sbjct: 412 RVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELL 471
Query: 422 QDWSYNKQFVER 433
++ F E+
Sbjct: 472 RNRVIGLGFSEQ 483
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 200/387 (51%), Gaps = 6/387 (1%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V E L NDW+ ++ FF W + + H+T Y+ M+ ILGK +FD +W LI+ MR
Sbjct: 50 VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 109
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+ T IL +RY H V AI A+ + FK F L+ ALC ++
Sbjct: 110 SPSASP--DHATFRILFKRYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRH 166
Query: 154 VQDAEHLMFCNKDVFPFN--TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
V +A+ L F + TK N+IL GW + G + W EM ++G+ D+ S+
Sbjct: 167 VDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKM-GWWSKCRDFWEEMDKKGVRKDLHSY 225
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S + K+ K ++L+ +MK+ G++ D YN VIHA+ V A + M+E
Sbjct: 226 SIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKE 285
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG 331
G PNVVT N++IK C+ + +A D+ML+R P + TYH F + +E+
Sbjct: 286 MGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILV 345
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L + M K G P DTY+ML++KF RW VF VWN++ E G P+ +Y ALI AL
Sbjct: 346 LFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALV 405
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTD 418
G ++ A +Y EM K L P+ + +
Sbjct: 406 EKGMIDMARKYDEEMVAKGLSPKLRVE 432
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 201/396 (50%), Gaps = 12/396 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAWA 86
+ + V E LS NDW A FF W+ +G + + ILGK +F A +
Sbjct: 37 LDASAVLETLSLYANDWRRALDFFHWSASPTGANLPPTAATLARAVDILGKHFEFPLATS 96
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQG 143
L+ E P+ + + L L+ R A + V A+ AF + ++G+ D F
Sbjct: 97 LLLSHHDPED-PAFL-RPALRALLNRLAAANLVDDALRAFDSTAA---SIGLRDEASFHL 151
Query: 144 LLSALCRYKNVQDAEHLMFC-NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ ALC ++ V +A+HL F + FP TK+ N++L GW +R ++W +M +R
Sbjct: 152 LVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKTRAWAR-LRQLWFDMDRR 210
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ D+ S+S + +K+ K ++F +MK+ G+ D YN IHA+ + V A
Sbjct: 211 GVAKDLHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDSA 270
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L + M + G PN TYN ++K CK + E +M + G P + TYH F
Sbjct: 271 VRLYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQF 330
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ +EV GL E M + GCQP DTY+MLIK+F RW VF VW + E G PD +
Sbjct: 331 LSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFA 390
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
Y ALI AL G ++ A +Y EM K L P+P+ +
Sbjct: 391 YNALIDALLQKGMVDLARKYDEEMLAKGLSPKPRKE 426
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 203/396 (51%), Gaps = 12/396 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAWA 86
+ + V + LS NDW A FF W+ +G + + ILGK +F A +
Sbjct: 33 LDASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATS 92
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQG 143
L+ + + G + L L+ R A + + A++AF + ++G+ D F
Sbjct: 93 LL--LSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAA---SIGLCDEVSFHI 147
Query: 144 LLSALCRYKNVQDAEHLMFC-NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ ALC ++ V +A+HL F + FP TK+ N++L GW +R ++W +M +R
Sbjct: 148 LVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWAR-LRQLWFDMDRR 206
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ D+ S+S + +K+ K ++F +MK+ GI D YN IHA+ + V A
Sbjct: 207 GVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSA 266
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L + M + G PN+ TYN++IK CK + E +M + G P + TYH F
Sbjct: 267 VRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQY 326
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ +EV GL E M + GCQP DTY+MLIK+F RW VF VW + E G PD +
Sbjct: 327 LSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFA 386
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
Y ALI AL G ++ A +Y +M K L P+P+ +
Sbjct: 387 YNALIDALLQKGMVDLARKYDEKMLAKGLSPKPRKE 422
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 202/393 (51%), Gaps = 12/393 (3%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
V + L NDW+ A FF W + S + HST ++ M+ ILGK +F W LI M
Sbjct: 37 VRQTLLSFNNDWKRALEFFNWVEESHSQFHHSTDTFNLMLDILGKFFEFKLCWDLIRRMN 96
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
+ P T ++ +RY + H V AI+ F F F LL ALC YK
Sbjct: 97 AHPSSPP--NHATFRLMFKRYVSAHSVNDAIDTFNRLGEFNLK-DHTSFSNLLDALCEYK 153
Query: 153 NVQDAEHLMFCNKD-----VFPF-NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+V +A+ L+F N + V P NTK N++L GW + G + W EM ++G+
Sbjct: 154 HVLEAQDLLFGNDNRVTLSVDPIGNTKIHNMVLRGWFKL-GWWSKCNEFWEEMDKKGVHK 212
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D+ S+S + K K ++LF ++K+ G + D VYN VI A+ V +I +
Sbjct: 213 DLHSYSIYMDILCKGGKPWKAVKLFKEIKKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVF 272
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR-GISPTIRTYHAFLDIIRT 325
+ M+E G+ P VVTYN+LI+ LC + EA ++ G PT +YH F +
Sbjct: 273 REMKELGIKPTVVTYNTLIRLLCDCYRHKEALALLRTIMPSDGCHPTAVSYHCFFASMEK 332
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+++ + + M + G +PT DTY+ML+ KF RW VF VWN++ + G PD ++Y A
Sbjct: 333 PKQILAMFDEMVESGVRPTMDTYVMLLNKFGRWGFLRPVFMVWNKMKQLGCSPDAAAYNA 392
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
LI AL ++ A +Y EM K L P+P+ +
Sbjct: 393 LIDALVDKALIDMARKYDEEMLAKGLSPKPRKE 425
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 202/399 (50%), Gaps = 14/399 (3%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAW 85
+ + V E LS NDW A FF W+ G + + +LGK +F A
Sbjct: 30 PLDATAVLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLAT 89
Query: 86 AL-IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---F 141
+L + G PS + + L L+ R A + + AI AF + ++G+ D F
Sbjct: 90 SLLVSHHDPGRADPSFL-RPALRSLLNRLAAANLIDDAIRAFDSTAG---SIGLRDEASF 145
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFN--TKSFNIILNGWCNIIGSSREAERVWMEM 199
L+ ALC ++ V +A HL F KD PF TK++N++L GW +R ++W +M
Sbjct: 146 HALVDALCDHRRVDEAHHLCF-GKDPPPFPPVTKTYNLLLRGWAKTRAWAR-LRQLWFDM 203
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RG+ D+ S+S + +K+ K ++F +MK+ G+ D YN IH++ + V
Sbjct: 204 DSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGV 263
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
AI L + M + G PN T+N+++K LCK + E +M + GI P + TYH F
Sbjct: 264 DFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCF 323
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ +EV GL E M + GC P DTY+MLIK+F RW VF VW + E G PD
Sbjct: 324 FQYLSRPQEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPD 383
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+Y +LI AL G ++ A +Y EM K L P+P+ +
Sbjct: 384 AFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRKE 422
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 203/398 (51%), Gaps = 14/398 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAWA 86
+ + V E LS NDW A FF W+ G + + +LGK +F A +
Sbjct: 31 LDATAVLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATS 90
Query: 87 L-IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQ 142
L + G PS + + L L+ R A + + AI AF + ++G+ D F
Sbjct: 91 LLVSHHDPGRADPSFL-RPALRSLLNRLAAANLIDDAIRAFDSTAG---SIGLRDEASFH 146
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFN--TKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ ALC ++ V +A HL F KD PF TK++N++L GW +R ++W +M
Sbjct: 147 ALVDALCDHRRVDEAHHLCF-GKDPPPFPPVTKTYNLLLRGWAKTRAWAR-LRQLWFDMD 204
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RG+ D+ S+S + +K+ K ++F +MK+ G+ D YN IH++ + V
Sbjct: 205 SRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVD 264
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
AI L + M + G PN T+N+++K LCK + E +M + GI P + TYH F
Sbjct: 265 FAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFF 324
Query: 321 DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ +EV GL E M + GC+P DTY+MLIK+F RW VF VW + + G PD
Sbjct: 325 QYLSRPQEVLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLSPDA 384
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+Y +LI AL G ++ A +Y EM K L P+P+ +
Sbjct: 385 FAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRKE 422
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 226/436 (51%), Gaps = 19/436 (4%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A + IL + + M + ++ GI +S+ LV + L +RN + A +FFLWA Q+
Sbjct: 53 ADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAH 112
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
++H Y+ +I IL KVR+FD AW I EM P T T ILIRR +
Sbjct: 113 HSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEP---TSTTFRILIRRSVSAGLTR 169
Query: 121 RAINAFYAYKRF-KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A+ AF F + +DF LL L +Y V+ A + K F N K + I++
Sbjct: 170 QAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILI 229
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR---------- 229
GWC I S AER+ EM +RGJ +VV+++ +++ + +LH R
Sbjct: 230 YGWCKINRVSI-AERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEK 288
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ D+M++ GIE D Y+ VIH ++ + + ++ M++KG+ P V TY S++K LC
Sbjct: 289 VLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLC 348
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTN 345
+L++A + +M++ G+SP+ TY+ F R ++ L RKM C P
Sbjct: 349 SCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDM 408
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+ F + + V ++W+++ +G GPD SYT LIH L K +EA +++E
Sbjct: 409 HTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVE 468
Query: 406 MKEKQLLPEPKTDELL 421
M EK LP+ T E L
Sbjct: 469 MIEKGYLPQKITFETL 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R A ++DEMR P + + I+I Y H ++ K +
Sbjct: 281 RTIRDAEKVLDEMRQXGIEPDVTSYS---IVIHVYSRAHKPELTLDKLRMMKDKGIWPTV 337
Query: 139 EDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC ++DAE L+ KD + ++N + S A R++
Sbjct: 338 ATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGR-KDSDNALRLYR 396
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M + C D+ +++ ++ + K + V ++D MK G D Y +IH L +
Sbjct: 397 KMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEK 456
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ K+A M EKG P +T+ +L + L ++ L R+ ++ + I+
Sbjct: 457 QKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESIT 510
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 191/369 (51%), Gaps = 6/369 (1%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
++ FF W + + H+T Y+ M+ ILGK +FD +W LI+ MR + T
Sbjct: 615 SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASP--DHATFR 672
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
IL +RY H V AI A+ + FK F L+ ALC ++V +A+ L F
Sbjct: 673 ILFKRYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRK 731
Query: 168 FPFN--TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ TK N+IL GW + G + W EM ++G+ D+ S+S + K+
Sbjct: 732 LDCDSSTKIHNLILRGWLKM-GWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPW 790
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K ++L+ +MK+ G++ D YN VIHA+ V A + M+E G PNVVT N++I
Sbjct: 791 KAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVI 850
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
K C+ + +A D+ML+R P + TYH F + +E+ L + M K G P
Sbjct: 851 KLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKM 910
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
DTY+ML++KF RW VF VWN++ E G P+ +Y ALI AL G ++ A +Y E
Sbjct: 911 DTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEE 970
Query: 406 MKEKQLLPE 414
M K L P+
Sbjct: 971 MVAKGLSPK 979
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 226/436 (51%), Gaps = 19/436 (4%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A + IL + + M + ++ GI +S+ LV + L +RN + A +FFLWA Q+
Sbjct: 53 ADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAH 112
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
++H Y+ +I IL KVR+FD AW I EM P T T ILIRR +
Sbjct: 113 HSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEP---TSTTFRILIRRSVSAGLTR 169
Query: 121 RAINAFYAYKRF-KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A+ AF F + +DF LL L +Y V+ A + K F N K + I++
Sbjct: 170 QAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILI 229
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR---------- 229
GWC I S AER+ EM +RGI +VV+++ +++ + +LH R
Sbjct: 230 YGWCKINRVSI-AERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEK 288
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ D+M++ GIE D Y+ VIH ++ + + ++ M++KG+ P V TY S++K LC
Sbjct: 289 VLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLC 348
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTN 345
+L++A + +M++ G+SP+ TY+ F R ++ L RKM C P
Sbjct: 349 SCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDM 408
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+ F + + V ++W+++ +G GPD SYT LIH L K +EA +++E
Sbjct: 409 HTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVE 468
Query: 406 MKEKQLLPEPKTDELL 421
M EK LP+ T E L
Sbjct: 469 MIEKGYLPQKITFETL 484
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 6/234 (2%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R A ++DEMR P + + I+I Y H ++ K +
Sbjct: 281 RTIRDAEKVLDEMRQKGIEPDVTSYS---IVIHVYSRAHKPELTLDKLRMMKDKGIWPTV 337
Query: 139 EDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC ++DAE L+ KD + ++N + S A R++
Sbjct: 338 ATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGR-KDSDNALRLYR 396
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M + C D+ +++ ++ + K + V ++D MK G D Y +IH L +
Sbjct: 397 KMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEK 456
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ K+A M EKG P +T+ +L + L ++ L R+ ++ + I+
Sbjct: 457 QKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESIT 510
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 223/451 (49%), Gaps = 48/451 (10%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA---GKQSGYAHSTREYHTMI 72
SE+ + +C + ++ +LV +VL R+DW A+ FF WA G +SGY+ ++ ++
Sbjct: 103 SEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEIL 162
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA-INAFYAYKR 131
ILG++R+F L DEM + LV ++T +L+ RY A H A + FY K
Sbjct: 163 DILGRMRRFHEMTQLFDEMSKRK---GLVNERTFGVLLNRYAAAHKTEEAAVKIFYKRK- 218
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
A R S N+ILNGWC ++GS RE
Sbjct: 219 --------------GAWIR-----------------------SMNVILNGWC-VLGSLRE 240
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A+R W ++ D ++ I+ +KA L ++LF M G D + N +I
Sbjct: 241 AKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIID 300
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
AL + + +A+ +++ M E+ P+V TYNSLIK LCK ++ ++ + D+M Q+G P
Sbjct: 301 ALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 360
Query: 312 TIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
RTY L + EEV G+LE M + GC+ +D Y +++K + W + +E+
Sbjct: 361 NARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEM 420
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
NG GPD+ +YT +IH L+ G++++A Y+ +M ++PEP+T L+ + N +
Sbjct: 421 ERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVN--AMNIKLK 478
Query: 432 ERQIASLKAHQPQSGQNTRVISKKSDQDREF 462
ER+ + R +++ + R F
Sbjct: 479 EREAEPEGKGARNKADSIRPSTRRGKKKRAF 509
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 224/426 (52%), Gaps = 12/426 (2%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH 63
++D L H M ++ECGI +S +LV EVL R+ + AF FF WA ++ G+ H
Sbjct: 82 VIDELFALDHN---MEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWAAEKPGFVH 138
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+R YH+M+ IL K R+F+T ++++EM GE L+T T I +R + A + +A+
Sbjct: 139 DSRTYHSMMIILAKARQFETMMSMLEEM--GEK--RLLTLDTFSIAMRAFAAAKERKKAV 194
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
F K K+ VG+E LL +L R K ++A+ L + F N +++ ++LNGWC
Sbjct: 195 GIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWC 254
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ + EA R+W EM G D+V+ + ++ +++ ++ F+ MK G D
Sbjct: 255 R-VKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDV 313
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ Y +I L K +K+A+ M + G P+ Y L+ +++D + E
Sbjct: 314 RSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKE 373
Query: 304 MLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M ++G P +TY+A + ++ R ++ + + M + G +P+ +Y M++K + R R
Sbjct: 374 MKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRN 433
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDE 419
+ VW+E+S+ G PD +SYT I L G+ EEA +Y EM EK + P+ ++
Sbjct: 434 YEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNK 493
Query: 420 LLQDWS 425
D+S
Sbjct: 494 FAADFS 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 11/240 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ ++ M+ L + +K A + M+ P + ++ ILIR C +
Sbjct: 273 GFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDV---RSYTILIRDLCKQTKM 329
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNII 178
A+ FY + L++ +K + L+ K+ P + K++N +
Sbjct: 330 KEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNAL 389
Query: 179 LNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ ++ S R +A R++ +M Q GI + S++ I+ Y + RN ++D+M
Sbjct: 390 IK----LMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMS 445
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G D Y I L ++A ++ M EKG+ + YN +A K D
Sbjct: 446 KKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPD 505
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 205/398 (51%), Gaps = 11/398 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
CG+ VS LV +VL NDW AF FF WA Q+GY HS Y++M+ ILGK++KFD
Sbjct: 113 CGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLM 172
Query: 85 WALIDEMR--GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
W L++EM GG + +TK ++RR AI AF +RF
Sbjct: 173 WELVEEMDRLGGYVSLATMTK-----VMRRLARASRWKDAIEAFRGMERFGVKKDTLAMN 227
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ AL + +V+ A + KD N +FN++++GWC A + EM +
Sbjct: 228 TLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKA-RKMDNALKSMAEMKEH 286
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G C DV+S++ I+ Y + ++ KV + ++M+ G + Y V+HAL KG+ + A
Sbjct: 287 GFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKA 346
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
+ + + M+ P+ Y+SLI L KA +L +AR F++M ++G P + TY+ +
Sbjct: 347 LEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISA 406
Query: 322 --IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ E+ LL M + C+P +TY L+K R + + + N + +N +
Sbjct: 407 ACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLE 466
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Y+ L+H L +GKLE A ++ EM K L+P+ T
Sbjct: 467 VGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCT 504
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 231/436 (52%), Gaps = 19/436 (4%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A+ + +IL + M + ++ GI +SS L+ + L +R++ + A +FF ++
Sbjct: 39 AEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPS 98
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ +T Y+ +I IL KVR+FD +W LI +M P+ T LILIRR +
Sbjct: 99 SSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPN---SHTFLILIRRLISAGFTR 155
Query: 121 RAINAFYAYKRF-KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+AI AF + F V F LL LC+Y ++ A + K F N + + +++
Sbjct: 156 QAIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLI 215
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK----------ARNLHKVLR 229
GWC I G AER EM + GI +VV+++ ++ + R + K +
Sbjct: 216 YGWCKI-GRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADK 274
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+FD+M++ GIE D ++ ++H ++ + + +K MEE G+ P V TY S++K LC
Sbjct: 275 VFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLC 334
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG----CQPTN 345
++D+A + ++M++ G+SP TY+ F R ++ L+ RK+ C P+
Sbjct: 335 SCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSV 394
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+ F + +F V ++WN++ +G+GPD SYT L+H L K ++A Q+++E
Sbjct: 395 HTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVE 454
Query: 406 MKEKQLLPEPKTDELL 421
M EK LLP+ T E+L
Sbjct: 455 MIEKGLLPQKATFEML 470
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 18/236 (7%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R A + DEMR P + + IL+ Y H ++ + +
Sbjct: 267 RTIMKADKVFDEMRQKGIEPDVTS---FSILLHVYSRAHKPQLTVDKLKLMEEMGICPTV 323
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ +L LC + DAE L+ V P N ++N + A +++
Sbjct: 324 ATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSP-NAATYNCFFKEYRGR-KDPETALKLY 381
Query: 197 MEMSQRGICYDVV-SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
++ Q +C V +++ ++ + K + V +++ ++ G D Y ++H L +
Sbjct: 382 RKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCE 441
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAF 301
+ + A M EKG+ P T+ L L ++ +KLDE AF
Sbjct: 442 KQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDEESIAF 497
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 208/425 (48%), Gaps = 9/425 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ C ++VS+ LVS+VLS NDW AAF FF+WAG Q GY H Y M+ ILGK ++F
Sbjct: 154 MDCCPVRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQF 213
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D LI +M E G LV+ T+ ++RR C + AI+AF+ RF A +
Sbjct: 214 DLMCGLIGQMH--EIG-GLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAM 270
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL LC+ ++V+ A K P + SFN +++GWC +EA EM +
Sbjct: 271 NVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCK-ARMLKEARETMKEMER 329
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G V +++C+I Y ++ V + D+M G + Y V+HAL K ++
Sbjct: 330 HGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQE 389
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ +++ G A + YN LI LC+A +L +A +EM + GISP + T++ +
Sbjct: 390 ALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLIS 449
Query: 322 II---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E LL M + C P TY L+K R + + + + P
Sbjct: 450 AACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITP 509
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE--RQIA 436
D S+YT L+ L NG+L ++ + EM K P+ T +L+ + N + R+I
Sbjct: 510 DFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKLKNMHMLSAVRKIQ 569
Query: 437 SLKAH 441
L+ H
Sbjct: 570 LLRMH 574
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F +M R G+ D K N ++ L K R VK A ++++ + P+ ++N+L+ CK
Sbjct: 255 FHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGT-IPPDESSFNTLVHGWCK 313
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDT 347
AR L EAR+ EM + G SP++ TY ++ + + + V G+L+ M GC P T
Sbjct: 314 ARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIIT 373
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +++ + + ++++ ++G D S Y LI+ L G+L++A+ EM
Sbjct: 374 YTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMH 433
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS 445
+ P T L + + E + L + QS
Sbjct: 434 RTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQS 471
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 228/436 (52%), Gaps = 23/436 (5%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A + IL + M + ++ I SS L+ + L + + + A +FF +A
Sbjct: 38 ADLVSQILLHHHNPFHSMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPS 97
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
ST Y+ ++ IL KVR+FD AW LI +M T T L+LIRR +
Sbjct: 98 NPISTTSYNILLDILAKVRQFDAAWHLILQMDHKGT-------DTFLLLIRRLISSGRTR 150
Query: 121 RAINAFYAYKRFKF-AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+AI AF + VGI+DF LL LC+Y V+ A + K+ F + K + I++
Sbjct: 151 QAIRAFDDIEGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILI 210
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH------KVLR---- 229
GWC I G AER +M +RGI +VV+++ +++ + +LH K +R
Sbjct: 211 YGWCKI-GRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEK 269
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+FD+M++ GIE D ++ V+H ++ + ++ +K M+E G++P V TY S+IK LC
Sbjct: 270 VFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLC 329
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG----CQPTN 345
+L++ +EM++ GISP+ TY+ F R ++ G L +KM C P+
Sbjct: 330 SCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSL 389
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+ F + + ++WN++ E+G GPD SYT +IH L + EA Q+++E
Sbjct: 390 HTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVE 449
Query: 406 MKEKQLLPEPKTDELL 421
M E+ LP+ T E+L
Sbjct: 450 MIERGFLPQKVTFEML 465
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 101/245 (41%), Gaps = 19/245 (7%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A + DEMR P + + I++ Y H +++ K + + +
Sbjct: 267 AEKVFDEMRKRGIEPDVTS---FSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTS 323
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ LC ++D E+L+ + P T ++N + + A R++ +M +
Sbjct: 324 VIKCLCSCGRLEDGENLIEEMVRSGISPSPT-TYNCFFKEYRGRKDGA-GALRLYKKMRE 381
Query: 202 RGICYDVV-SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+C + +++ +++ + + L++ MK G+ D Y +IH L + +
Sbjct: 382 DCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWS 441
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAF-DEMLQRGI 309
+A M E+G P VT+ L + L ++ +KL+E + + E+ I
Sbjct: 442 EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKNYHI 501
Query: 310 SPTIR 314
P +R
Sbjct: 502 KPYMR 506
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 216/400 (54%), Gaps = 9/400 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ECG+++S +LV +VL ++ + AF FF WAGK+ G+AH +R Y+ M+ +LG+ R+F
Sbjct: 195 LDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQF 254
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
+T A+++EM GE G L+T +T I I+ + +A+ F K++ F VG++
Sbjct: 255 ETMVAMLEEM--GEKG--LLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVI 310
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL +L K ++A+ + KD F + +++ I+L+GWC + + EA RVW EM
Sbjct: 311 NFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCR-LKNLLEAGRVWNEMID 369
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
RG DVV+ + ++ K + ++LF+ MK G + + Y +I K +L+ +
Sbjct: 370 RGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGE 429
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
AI M ++G P+ Y LI + +K+D EM +RG P RTY+A +
Sbjct: 430 AIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIK 489
Query: 322 IIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
++ + ++ + + M + G +PT TY M++K + + + ++W+E+ + G P
Sbjct: 490 LMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCP 549
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
D +SY I L + EA +Y EM EK + PK D
Sbjct: 550 DDNSYIVYIGGLIRQDRSGEACKYLEEMLEKG-MKAPKLD 588
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 211/409 (51%), Gaps = 6/409 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ + E G+++ L+ VL+ + + FF+WA KQ Y HS
Sbjct: 89 ILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIE 148
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y +M+ IL K+R+F W LI+EMR + P L+ + ++L++R+ + V +AI
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+F F F LL ALC++ +V+DA L + FP N + F +L GWC +
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRV- 265
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M++ G D+V ++ ++S Y+ A + L M+R G E + Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I AL K +++A+ + ME +VVTY +L+ CK K+D+ D+M++
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 307 RGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G+ P+ TY + + + EE L+E MR++ P Y ++I+ + +
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
++WNE+ ENG P ++ +I+ L G L EA ++ EM + L
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F ++ ++ A + K + + D+M + G E D V+ ++ AL K VKDA L + M
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+ N+ + SL+ C+ K+ EA+ +M + G P I Y L
Sbjct: 246 MR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + LL MR+ G +P + Y +LI+ + + KV+ E+ D +YTAL+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK+++ + +M +K L+P T
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 214/399 (53%), Gaps = 17/399 (4%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+++S L+ EVL + N A +FF WA KQ G+ H+T Y+ +I LGK+++F+ W
Sbjct: 118 MELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWN 177
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+ +M+ +++++T ++ RRY V A+ +F ++F F +G+ DF LL
Sbjct: 178 LVSDMKRK----GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLD 233
Query: 147 ALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQR 202
LC+ +NV+ A+ + K F + KS+ I+L GW N++ + V+ EM
Sbjct: 234 TLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLL----KLNEVYREMRDE 289
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G DVV+F +I+ + KAR + +RLF +M+ I+ V+ +I+ L + +K+A
Sbjct: 290 GFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + ++ G AP TYN+++ C + K+ A + DEM + G+ P RTY L
Sbjct: 350 LEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 323 I---RTGEEVFGLLESM-RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R +E + + + M R+ GC+PT TY ++I+ F + ++W+E+ G P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ LI++L KLE+A Y+ EM + + P P T
Sbjct: 470 GMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP-PAT 507
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNL 224
F T+S+N+++ +G ++ +W +M ++GI +F+ I Y++AR +
Sbjct: 152 FKHTTESYNLLIEA----LGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKV 206
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + F++M++ G + +N ++ L K R VK A + M+ P++ +Y L
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTIL 266
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGC 341
++ + + L + + + EM G P + T+ ++ R +E L M
Sbjct: 267 LEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P+ + LI ++ + + ++ +G P+ +Y A++ A + K+ A++
Sbjct: 327 KPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYR 386
Query: 402 YYMEMKEKQLLPEPKTDELL 421
EM++ + P +T +++
Sbjct: 387 MVDEMRKSGVGPNSRTYDII 406
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G+ + +I K RK+D A L EM PS LI +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS---PHVFCTLINGLGSE 343
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A+ F K FA + ++ A C + A ++ V P N+++
Sbjct: 344 KRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP-NSRT 402
Query: 175 FNIILNGWCNIIG-SSREAERVWMEMSQRGICYDVVS-FSCIISCYSKARNLHKVLRLFD 232
++IIL+ I G S+EA V+ MS+ C +S + +I + + ++++D
Sbjct: 403 YDIILHHL--IKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWD 460
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+MK G+ +++ +I++L ++DA + + M + G+ P +++L + L
Sbjct: 461 EMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQAL---- 516
Query: 293 KLDEARQ 299
LD+ R+
Sbjct: 517 -LDDGRK 522
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 214/399 (53%), Gaps = 17/399 (4%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+++S L+ EVL + N A +FF WA KQ G+ H+T Y+ +I LGK+++F+ W
Sbjct: 118 MELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWN 177
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+ +M+ +++++T ++ RRY V A+ +F ++F F +G+ DF LL
Sbjct: 178 LVSDMKRK----GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLD 233
Query: 147 ALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQR 202
LC+ +NV+ A+ + K F + KS+ I+L GW N++ + V+ EM
Sbjct: 234 TLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLL----KLNEVYREMRDE 289
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G DVV+F +I+ + KAR + +RLF +M+ I+ V+ +I+ L + +K+A
Sbjct: 290 GFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + ++ G AP TYN+++ C + K+ A + DEM + G+ P RTY L
Sbjct: 350 LEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 323 I---RTGEEVFGLLESM-RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R +E + + + M R+ GC+PT TY ++I+ F + ++W+E+ G P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ LI++L KLE+A Y+ EM + + P P T
Sbjct: 470 GMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP-PAT 507
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNL 224
F T+S+N+++ +G ++ +W +M ++GI +F+ I Y++AR +
Sbjct: 152 FKHTTESYNLLIEA----LGKIKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKV 206
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + F++M++ G + +N ++ L K R VK A + M+ P++ +Y L
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTIL 266
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGC 341
++ + + L + + + EM G P + T+ ++ R +E L M
Sbjct: 267 LEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P+ + LI ++ + + ++ +G P+ +Y A++ A + K+ A++
Sbjct: 327 KPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYR 386
Query: 402 YYMEMKEKQLLPEPKTDELL 421
EM++ + P +T +++
Sbjct: 387 MVDEMRKSGVGPNSRTYDII 406
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G+ + +I K RK+D A L EM PS LI +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS---PHVFCTLINGLGSE 343
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A+ F K FA + ++ A C + A ++ V P N+++
Sbjct: 344 KRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP-NSRT 402
Query: 175 FNIILNGWCNIIG-SSREAERVWMEMSQRGICYDVVS-FSCIISCYSKARNLHKVLRLFD 232
++IIL+ I G S+EA V+ MS+ C +S + +I + + ++++D
Sbjct: 403 YDIILHHL--IKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWD 460
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+MK G+ +++ +I++L ++DA + + M + G+ P +++L + L
Sbjct: 461 EMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQAL---- 516
Query: 293 KLDEARQ 299
LD+ R+
Sbjct: 517 -LDDGRK 522
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 217/418 (51%), Gaps = 16/418 (3%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A + IL +F+ S++ + E +K+S L+ EVL + N A + F WA Q G
Sbjct: 68 ADKICKILSKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKG 125
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ H+T Y+ +I LGK+++F W L+D+M+ + L++K T ++ RRY V
Sbjct: 126 FKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKK----LLSKDTFALISRRYARARKVK 181
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIIL 179
AI AF+ + + F + DF +L L + +NV DA+ + K F + KS+ I+L
Sbjct: 182 EAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 241
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
GW + R E V+ EM G DVV++ II+ Y KA+ + +R F++M++
Sbjct: 242 EGWGQELNLLRVNE-VYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNC 300
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ ++ ++I+ L + + DA+ + + G TYN+L+ C ++++++A +
Sbjct: 301 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFK 360
Query: 300 AFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
DEM +GI P RTY H + + RT E E +KM C+PT TY ++++ F
Sbjct: 361 TVDEMRSKGIGPNARTYDIILHHLIRMQRTKEA----YEVYQKMSCEPTVSTYEIMVRMF 416
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ K+W+E+ G P +++LI AL KL+EA +Y+ EM + + P
Sbjct: 417 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 474
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+EA + +M G + F+ ++ SK+RN+ ++FD+MK+ E D K Y +
Sbjct: 181 KEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 240
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ + + + M+++G P+VV Y +I CKA+K DEA + F+EM QR
Sbjct: 241 LEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQR-- 298
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
C+P+ + LI ++ + + +
Sbjct: 299 ------------------------------NCKPSPHIFCSLINGLGSEKKLNDALEFFE 328
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+G + +Y AL+ A + ++E+A + EM+ K + P +T +++
Sbjct: 329 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDII 380
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E +Q+G + +++ +I K + + L D MK+ + + + + A+
Sbjct: 119 WAE-NQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKL-LSKDTFALISRRYAR 176
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R VK+AI+ ME+ G +N ++ L K+R + +A++ FD+M ++ P I++
Sbjct: 177 ARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKS 236
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
Y +L++ + + V +V+ E+ + G
Sbjct: 237 --------------------------------YTILLEGWGQELNLLRVNEVYGEMKDEG 264
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
PD +Y +I+A K +EA +++ EM+++ P P
Sbjct: 265 FEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSP 304
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 208/417 (49%), Gaps = 6/417 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ ++E G+ + S L VLS + + FF+WA KQ GY HS
Sbjct: 106 ILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYE 165
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI LGK+R+F WALI+EMR + P ++T + ++L+RR+ +V V +A+
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEMR--KENPYMLTPEVFIVLMRRFASVRMVKKAVEVL 223
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A L + F N + F +L GWC
Sbjct: 224 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCR-E 282
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V +++ + G D+V ++ ++ Y++A + L +MK++ + +
Sbjct: 283 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 342
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + K + +A+ + M+ G +VVTY +LI CK D+A + D+M+Q
Sbjct: 343 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 402
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P+ +Y + EE+ L+E MRK+GC P + Y +I+ +
Sbjct: 403 KGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKE 462
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++W E+ G P +Y ++H G L EA Y+ EM E+ LL P+ L
Sbjct: 463 AVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTL 519
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 41/231 (17%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNAVIHAL 253
VW Q G + + +I K R V L ++M++ +V+ ++
Sbjct: 152 VWAS-KQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRF 210
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
A R+VK A+ ++ M + G P+ + L+ LCK + EA F++M R +P +
Sbjct: 211 ASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNL 269
Query: 314 RTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK---VWNE 370
R + + L +G W + G + + V +
Sbjct: 270 RHFTSLL---------YG--------------------------WCREGKIMEAKHVLVQ 294
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I E G PD Y L+ GK+ +A EMK+ P + +L
Sbjct: 295 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTIL 345
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 209/414 (50%), Gaps = 7/414 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR + + ++ + E GI + L+ VLS + + FFLWA KQ GY HS
Sbjct: 76 ILRNYHSRVPKLELSLNESGIDLRPGLIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYE 135
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+M+ IL K+R+F W LI+EMR + P L+ + ++LIRR+ + + V +A+
Sbjct: 136 VCKSMVKILSKMRQFGAVWGLIEEMR--KENPELIEPELFVVLIRRFASANMVKKAVEVL 193
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F F LL ALC+ +V+DA + ++ P N + F +L GWC
Sbjct: 194 DEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCR-E 252
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M + G+ D+V F+ ++S Y+ A + L + M++ G E + Y
Sbjct: 253 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCY 312
Query: 247 NAVIHALAKG-RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+I AL + + + +A+ + ME G ++VTY +LI CK +D+ D+M
Sbjct: 313 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 372
Query: 306 QRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G+ P+ TY L + EE L+E M+++GC P Y ++I+ +R+
Sbjct: 373 KKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVK 432
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++WNE+ NG P + +I+ G L EA ++ EM + + P+
Sbjct: 433 EAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQ 486
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 208/417 (49%), Gaps = 6/417 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ ++E G+ + S L VLS + + FF+WA KQ GY HS
Sbjct: 83 ILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYE 142
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI LGK+R+F WALI+EMR + P ++T + ++L+RR+ +V V +A+
Sbjct: 143 VYKAMIKTLGKMRQFGAVWALIEEMR--KENPYMLTPEVFIVLMRRFASVRMVKKAVEVL 200
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A L + F N + F +L GWC
Sbjct: 201 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCR-E 259
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V +++ + G D+V ++ ++ Y++A + L +MK++ + +
Sbjct: 260 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 319
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + K + +A+ + M+ G +VVTY +LI CK D+A + D+M+Q
Sbjct: 320 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 379
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P+ +Y + EE+ L+E MRK+GC P + Y +I+ +
Sbjct: 380 KGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKE 439
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++W E+ G P +Y ++H G L EA Y+ EM E+ LL P+ L
Sbjct: 440 AVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTL 496
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 41/231 (17%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNAVIHAL 253
VW Q G + + +I K R V L ++M++ +V+ ++
Sbjct: 129 VWAS-KQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRF 187
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
A R+VK A+ ++ M + G P+ + L+ LCK + EA F++M R +P +
Sbjct: 188 ASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNL 246
Query: 314 RTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK---VWNE 370
R + + L +G W + G + + V +
Sbjct: 247 RHFTSLL---------YG--------------------------WCREGKIMEAKHVLVQ 271
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I E G PD Y L+ GK+ +A EMK+ P + +L
Sbjct: 272 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTIL 322
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 194/396 (48%), Gaps = 12/396 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAWA 86
+ + V E LS NDW A FF W+ +G + I ILGK +F A +
Sbjct: 32 LDAAAVLETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATS 91
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQG 143
L+ + + + L L+ R A + V A+ F + ++G+ D F
Sbjct: 92 LL--LSHHDPSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAG---SIGLRDEASFHL 146
Query: 144 LLSALCRYKNVQDAEHLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ ALC ++ V +A HL F FP TK+ N++L GW +R + W +M R
Sbjct: 147 LIDALCDHRRVDEAHHLCFGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQH-WFDMDNR 205
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ D+ S+S + +K+ K +++F +MK+ + D YN IHA+ + V +
Sbjct: 206 GVAKDLHSYSIYMDALAKSGKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFS 265
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L + M + G PN T+N+++K LCK + E +M + G P + TYH F
Sbjct: 266 VRLYRQMVDAGCKPNTATFNTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQY 325
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ +EV L E M + GC+P DTY+MLIK+F RW VF VW + E G PD +
Sbjct: 326 LSRPQEVLVLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFA 385
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
Y LI AL G ++ A +Y EM K L P+P+ +
Sbjct: 386 YNTLIDALLEKGMVDLARKYDEEMLAKGLSPKPRKE 421
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
IL + + ++ + ++S+ LV +VL +N +A FFLWA + G+ HS
Sbjct: 54 ILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEE 113
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
YH ++ ILG R+F W + EMR E+ + ++ + ++ R Y + AI AF
Sbjct: 114 SYHILVNILGTSRQFAILWDFLIEMR--ESHDFEINQEIIWLVFRSYSRANLPSDAIRAF 171
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F ++D LL LC+ K+V+ A+ K F K+++I++ GW +I
Sbjct: 172 DRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDI- 230
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + EA +V+ EM RG DV++++ ++ K N+ + ++F ++ G+E D Y
Sbjct: 231 GEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSY 290
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
I A + + S++ M+ + PNV TYN +IK LCK K+++A Q EM++
Sbjct: 291 AIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMME 350
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG+SP +Y+ L EV L+ M K C P +Y ML+K R +F
Sbjct: 351 RGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDR 410
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
++W + E G P S+Y+ +IH L GKLEEA +Y+ M ++ + P T E+L+
Sbjct: 411 ATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLR 470
Query: 423 D 423
+
Sbjct: 471 N 471
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 213/404 (52%), Gaps = 9/404 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++ECGI +S +LV +VL + + AF FF WAG++ G+ H +R Y++M++IL K
Sbjct: 82 MEAVLDECGINLSHDLVIDVLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAK 141
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T ++++EM G ++T T I +R + A + +A+ F K++ + VG
Sbjct: 142 TRQFETVVSMLEEM----GGKGVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVG 197
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+E LL +L R K ++A+ L K F N +++ ++LNGWC + + EA VW
Sbjct: 198 VETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKV-KNLMEAGSVWN 256
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +G D+V+ + ++ +++ ++LF MK G D + Y +I L +
Sbjct: 257 EMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQS 316
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+++A+ + M + G P+ Y LI +++D EM + G P TY+
Sbjct: 317 KMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYN 376
Query: 318 AFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + + ++ ++ + + M + G +PT TY M++K + + R + VW+E+S
Sbjct: 377 ALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRK 436
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
G PD +SYT LI L G+ EA +Y EM EK + P+ D
Sbjct: 437 GFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKG-MKAPQLD 479
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ G E D + YN+++ LAK R + +S+++ M KGV + T++ ++ A++
Sbjct: 121 EKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVL-TMDTFSIAMRAFAAAKER 179
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A F+ M + + T + LD + + G+E L E++ K P TY +L
Sbjct: 180 KKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENL-KGRFTPNLRTYTVL 238
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + + + VWNE+ + G PD ++ ++ L + + +A + +M MK K
Sbjct: 239 LNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGP 298
Query: 412 LPEPKTDELL 421
P+ ++ +L
Sbjct: 299 SPDVRSYTIL 308
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 215/414 (51%), Gaps = 8/414 (1%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A+ + IL +F+ S++ + E +K+S L+ EVL + N A + F WA Q G
Sbjct: 66 AERICKILTKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKG 123
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ H+T Y+ +I LGK+++F W+L+D+M+ + L++K+T ++ RRY V
Sbjct: 124 FKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK----LLSKETFALISRRYARARKVK 179
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIIL 179
AI AF+ + F F + DF +L L + +NV DA+ + K F + KS+ I+L
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
GW + R + V EM G DVV++ II+ + KA+ + +R F++M++
Sbjct: 240 EGWGQELNLLR-VDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ ++ ++I+ L + + DA+ + + G TYN+L+ C ++++++A +
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
DEM +G+ P RTY L + + E + M C+PT TY ++++ F
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKE 418
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ K+W+E+ G P +++LI AL KL+EA +Y+ EM + + P
Sbjct: 419 RLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+EA + +M + G + F+ ++ SK+RN+ ++FD+MK+ E D K Y +
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ + + + + M+++G P+VV Y +I CKA+K +EA + F+EM QR
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR-- 296
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
C+P+ + LI ++ + + +
Sbjct: 297 ------------------------------NCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+G + +Y AL+ A + ++E+A++ EM+ K + P +T +++
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E +Q+G + +++ +I K + + L D MK + ++ + + A+
Sbjct: 117 WAE-NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYAR 174
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R VK+AI MEE G +N ++ L K+R + +A++ FD+M ++ P I++
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 234
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN---EIS 372
Y LLE W Q N+ +V E+
Sbjct: 235 YTI-------------LLEG----------------------WGQELNLLRVDEVNREMK 259
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ G PD +Y +I+A K EEA +++ EM+++ P P
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 212/412 (51%), Gaps = 9/412 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++ECG+K+S +LV EVL+ + + AF FF WA ++ G+AH ++ Y+TM+ ILGK
Sbjct: 162 MEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGK 221
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T +L++EM E L+T +T + + + A + +A+ K++K+ VG
Sbjct: 222 TRQFETMVSLLEEMAEKE----LLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVG 277
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+E LL +L R K ++A + F N +++ ++LNGWC + + EA ++W
Sbjct: 278 VETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCR-VRNLMEAGKIWN 336
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M D+V+ + ++ + + ++LF+ MK G D K Y ++ K
Sbjct: 337 QMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQA 396
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K+A+ + M+ G P+ Y LI +++D EM G P +TY+
Sbjct: 397 KMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYN 456
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + ++ R ++ + + M + G +PT TY M++K + + R + W+E+
Sbjct: 457 ALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLK 516
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
G PD +SYT I L G+ EA +Y EM EK + P+ ++ D+S
Sbjct: 517 GCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFS 568
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 153/334 (45%), Gaps = 20/334 (5%)
Query: 116 VHDVGRAINAFYAYKRFKFAV----GIEDFQGL-LSALCRYKNVQDAEHLMFC---NKDV 167
V+ V + I+ +A R AV G++ L L L R+K + FC K
Sbjct: 145 VNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPG 204
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
F ++K++N ++ I+G +R+ E + EM+++ + + +F+ ++ A+
Sbjct: 205 FAHDSKTYNTMMT----ILGKTRQFETMVSLLEEMAEKEL-LTMETFTVCFKAFAAAKER 259
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + + + MK+ + + N ++ +L + +L K+A+++ + + + PN+ TY L
Sbjct: 260 KKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVL 318
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+ C+ R L EA + +++M+ P I ++ L+ + + + L E M+ G
Sbjct: 319 LNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGP 378
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P +Y +L++ F + + + + E+ G PD + YT LI +++ +
Sbjct: 379 SPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYG 438
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMK P+ KT L NK+ + +
Sbjct: 439 LLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAV 472
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 5/229 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++TM+ L + +K A L + M+ P + ++ IL+R +C + A+ F
Sbjct: 350 HNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDV---KSYTILVRDFCKQAKMKEAVQYFE 406
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCNII 186
+ + L++ K + L+ K + P + K++N ++ N
Sbjct: 407 EMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNK- 465
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+A R++ +M + GI ++S ++ Y + RN + +D+MK G D Y
Sbjct: 466 RMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSY 525
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
I L +A ++ M EKG+ + YN +A + D
Sbjct: 526 TVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPD 574
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 210/415 (50%), Gaps = 26/415 (6%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI ++ L+ L ++N + A + F +A S + +I + KVR+FD AW
Sbjct: 62 GITLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAW 121
Query: 86 ALIDEM-RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF-KFAVGIEDFQG 143
LI EM + P T T L LIRR +A+ AF+ F + +DF
Sbjct: 122 QLIVEMDQRHHLTP---TPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCV 178
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL LC+Y +V+ A + NK FP K + +++ GWC I G + A+ EM +G
Sbjct: 179 LLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKI-GRIKTAQSFLNEMIDKG 237
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLR----------LFDQMKRMGIECDRKVYNAVIHAL 253
I +VV+++ +++ + +LH R +FDQM+ GIE D ++ ++H
Sbjct: 238 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVY 297
Query: 254 A---KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ K +LV D +SLMK EKG+ PNVV Y S+IK L L++A + EM++ G+S
Sbjct: 298 SRAHKPQLVLDKLSLMK---EKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVS 354
Query: 311 PTIRTYHAFLDIIR---TGEEVFGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFGNVFK 366
P TY+ F R GE + + M++ G C P++ TY++LI+ F R V +
Sbjct: 355 PCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVVKE 414
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+W ++ E G GPD YT LIH L + EA Y++EM E LP T E L
Sbjct: 415 IWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLPLKGTFESL 469
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 108/303 (35%), Gaps = 61/303 (20%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ + + Y +I K+ + TA + ++EM P++VT LL + R ++H
Sbjct: 203 FPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEE 262
Query: 121 R-------AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ---DAEHLMFCNKDVFPF 170
R A F + + F LL R Q D LM K + P
Sbjct: 263 RFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMK-EKGICP- 320
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + ++ + G +AER+ EM + G+ +++C + ++ LR+
Sbjct: 321 NVVMYTSVIKCLASC-GWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRM 379
Query: 231 FDQMKRMGIEC-------------------------------------DRKVYNAVIHAL 253
F +MK G+ C D +Y +IH L
Sbjct: 380 FKRMKEDGL-CMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGL 438
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAFDE 303
+ + ++A M E G P T+ SL + L +A +KLDE F
Sbjct: 439 CERQRWREACHYFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKLDEESITFGS 498
Query: 304 MLQ 306
Q
Sbjct: 499 EFQ 501
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 204/392 (52%), Gaps = 11/392 (2%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
++VS LV E L + N A +FF WA KQ G+ +ST YH +I LGK+++F+ W
Sbjct: 1 MEVSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 60
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+ +M+ L+ K+T ++ RRY V A++AF ++F + D LL
Sbjct: 61 LVTDMK----QKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLD 116
Query: 147 ALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
LC+ + V+ A+ L+F NK F + KS+ I+L GW SR E V+ EM G
Sbjct: 117 TLCKSRQVERAQ-LVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLME-VYNEMKDEGF 174
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
DVV++ +I+ + K+R + LF +M+ + +Y +I+ L + + +A+
Sbjct: 175 EPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALE 234
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
+ + G P TYN+++ C + ++D+ ++ DEM + G+ P+ RTY L +I
Sbjct: 235 FFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLI 294
Query: 324 RTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R G+ + + + M GCQP+ TY ++++ F + KVW+++ G P
Sbjct: 295 RAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMH 354
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ LI++L KL+EA Y+ EM + + P
Sbjct: 355 MFSTLINSLCHESKLDEACMYFQEMLDVGIRP 386
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 4/312 (1%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+A K+ F E + L+ +L + K +L+ K N ++F +I +
Sbjct: 28 WAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALISRRYARA- 86
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+EA +M+M + G+ + + ++ K+R + + +FD+M + G D K Y
Sbjct: 87 RKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSY 146
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++ + + + + + M+++G P+VVTY LI CK+R+ D+A + F EM
Sbjct: 147 TILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEA 206
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ P+ Y ++ + + E E + G P TY ++ + + +
Sbjct: 207 KNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDD 266
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
V + +E+ + G GP +Y ++H L GK + A+ + +M + P T E++
Sbjct: 267 VQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVR 326
Query: 424 WSYNKQFVERQI 435
N+ V+ I
Sbjct: 327 MFCNEDRVDMAI 338
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 203/410 (49%), Gaps = 10/410 (2%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
+H S +E+ IKVS LV EVL + N A +FF WA KQ G+ ++T Y+ +
Sbjct: 104 THSGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNAL 163
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I LGK+++F +L++EM+ + L+ K T ++ RR+ V AI AF +
Sbjct: 164 IEALGKIKQFKLIRSLVNEMKSRK----LLNKDTFALISRRHARARKVEEAIEAFERMEE 219
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
F F + DF LL LC+ ++V+ A + K F + KS+ I+L GW R
Sbjct: 220 FGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLR 279
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E V++EM G DVV++ +IS Y KA+ + LF +M+ + VY +I
Sbjct: 280 LDE-VYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLI 338
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L + + +A+ + + G P TYNSL+ C + ++D+A Q DEM +
Sbjct: 339 NGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAG 398
Query: 311 PTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P RTY H + RT E F + + GC+PT TY ++++ F + +
Sbjct: 399 PNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQ 458
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
VW+++ G P Y+ LI +L KL EA +Y+ EM + + P K
Sbjct: 459 VWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAK 508
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 207/422 (49%), Gaps = 9/422 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++V+ LV ++L+ NDW AAF FF+W G Q GY H Y M+ ILGK ++FD
Sbjct: 185 CSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLM 244
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W LI++M E G L++ T+ ++RR AI+AF+ RF + L
Sbjct: 245 WGLINQMV--EVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVL 301
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L LC+ ++V+ A + + P + SFN +++GWC +EA EM Q G
Sbjct: 302 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKA-RMLKEALDTMEEMKQHGF 360
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VV+++ ++ Y ++ V L D+M++ + Y ++HAL K ++A+
Sbjct: 361 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 420
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
++E GVAP+ YNSLI L +A +L++A +EM GI+P + T++ +
Sbjct: 421 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 480
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
E LL M + C P TY L+K + + + + + PD S
Sbjct: 481 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 540
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLK 439
+YT L+ L NGK+ ++ + EM K P+ +T +L+ + N Q V ++I L+
Sbjct: 541 TYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVLR 600
Query: 440 AH 441
Sbjct: 601 TQ 602
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 7/268 (2%)
Query: 184 NIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I+G ++ + +W +M + G +++ + ++ + A + + F +M R G+
Sbjct: 233 DILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVV 292
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D K N ++ L K R VK A + + + + P+ ++N+L+ CKAR L EA
Sbjct: 293 KDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLKEALDT 351
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+EM Q G SP++ TY + ++ + + + V+ LL+ MRK C P TY +L+ +
Sbjct: 352 MEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGK 411
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++++ E+G PD S Y +LI+ L G+LE+A+ EM+ + P T
Sbjct: 412 AGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTT 471
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQS 445
L + + E + L + QS
Sbjct: 472 FNTLISAACDHSQAENALKLLVKMEEQS 499
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 208/422 (49%), Gaps = 6/422 (1%)
Query: 2 KTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
KT+ ILR+F + ++ ++E G+ V S L VL+ + + FF+WA KQ GY
Sbjct: 92 KTVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGY 151
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
HS Y MI ILGK+R+F WALI+EMR P V+ ++L+RR+ + V +
Sbjct: 152 RHSYEVYKAMIKILGKMRQFGAVWALIEEMR--RENPQFVSPYVFVVLMRRFASARMVKK 209
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
AI ++ F LL ALC+ +V++A L + F K F +L G
Sbjct: 210 AIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYG 269
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
WC G EA+ V +++ + G D+V ++ +++ Y+ A + L +M+R E
Sbjct: 270 WCR-EGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEP 328
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ + +I AL + +++A+ + M+ G + VTY +LI CK K+ + +
Sbjct: 329 NVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELL 388
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
D M+Q+G P TY + EE+ L+E MRK+GC P + Y ++I+ +
Sbjct: 389 DNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKL 448
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ +VWNE+ G P ++ +IH L EA +++ EM + LL P+
Sbjct: 449 GEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYG 508
Query: 419 EL 420
L
Sbjct: 509 TL 510
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 207/422 (49%), Gaps = 9/422 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++V+ LV ++L+ NDW AAF FF+W G Q GY H Y M+ ILGK ++FD
Sbjct: 126 CSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLM 185
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W LI++M E G L++ T+ ++RR AI+AF+ RF + L
Sbjct: 186 WGLINQMV--EVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVL 242
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L LC+ ++V+ A + + P + SFN +++GWC +EA EM Q G
Sbjct: 243 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKA-RMLKEALDTMEEMKQHGF 301
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VV+++ ++ Y ++ V L D+M++ + Y ++HAL K ++A+
Sbjct: 302 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 361
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
++E GVAP+ YNSLI L +A +L++A +EM GI+P + T++ +
Sbjct: 362 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 421
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
E LL M + C P TY L+K + + + + + PD S
Sbjct: 422 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 481
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLK 439
+YT L+ L NGK+ ++ + EM K P+ +T +L+ + N Q V ++I L+
Sbjct: 482 TYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVLR 541
Query: 440 AH 441
Sbjct: 542 TQ 543
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 7/268 (2%)
Query: 184 NIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I+G ++ + +W +M + G +++ + ++ + A + + F +M R G+
Sbjct: 174 DILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVV 233
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D K N ++ L K R VK A + + + + P+ ++N+L+ CKAR L EA
Sbjct: 234 KDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLKEALDT 292
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+EM Q G SP++ TY + ++ + + + V+ LL+ MRK C P TY +L+ +
Sbjct: 293 MEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGK 352
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++++ E+G PD S Y +LI+ L G+LE+A+ EM+ + P T
Sbjct: 353 AGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTT 412
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQS 445
L + + E + L + QS
Sbjct: 413 FNTLISAACDHSQAENALKLLVKMEEQS 440
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 199/376 (52%), Gaps = 25/376 (6%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S + Y+ +I I+ KV +FD A LI EM P T T ILI+R + + +A+
Sbjct: 94 SLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPP---TPTTFFILIKRLISANLTRQAV 150
Query: 124 NAFYAYKRFKFAVGIED-FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
AF + + D F LL LC+Y V+ A L N + F + K + +++ GW
Sbjct: 151 RAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGW 210
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR----------LFD 232
C I G + A EM +G+ +VV+++ I++ + +LH R +FD
Sbjct: 211 CKI-GRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFD 269
Query: 233 QMKRMGIECDRKVYNAVIHALA---KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+M+ GIE D ++ V+H + K +LV D + LMK EKG+ PNVVTY S+IK LC
Sbjct: 270 EMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMK---EKGICPNVVTYTSVIKCLC 326
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG----CQPTN 345
+++EA DEM++ G+SP TY+ F R ++ L+ +KM C+PT
Sbjct: 327 SCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTT 386
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +LI F + G V ++WN++ E+G GPD SYT LIH L + K EA QY++E
Sbjct: 387 HTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVE 446
Query: 406 MKEKQLLPEPKTDELL 421
M EK LP+ T E L
Sbjct: 447 MIEKGFLPQKVTFETL 462
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 113/304 (37%), Gaps = 49/304 (16%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
L+ + + + Y +I K+ +F TA + ++EM+ P++VT +L I R
Sbjct: 188 LFNRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICR 247
Query: 113 YCAVHDVGR-------AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ---DAEHLMF 162
++H R A F + + F +L R Q D LM
Sbjct: 248 KASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLM- 306
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
K + P N ++ ++ C+ G EAE + EM + G+ +++C Y +
Sbjct: 307 KEKGICP-NVVTYTSVIKCLCSC-GRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRK 364
Query: 223 NLHKVLRLFDQMKR------------------------------------MGIECDRKVY 246
+ K L+ F +MK G+ D Y
Sbjct: 365 DADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSY 424
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+IH L + + ++A M EKG P VT+ +L + L ++ L R+ + Q
Sbjct: 425 TVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQ 484
Query: 307 RGIS 310
I+
Sbjct: 485 ESIT 488
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 208/407 (51%), Gaps = 10/407 (2%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
+H S + + + + VS LV EVL + N A +FF WA KQ G+ +ST Y+ +
Sbjct: 92 THSNSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNAL 151
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I LGK+++F W L+++MR L+T++T ++ RRY V A+ F ++
Sbjct: 152 IEALGKIKQFKMIWNLVNDMRS----KGLLTQETFALISRRYARARKVKEAVETFEKMEK 207
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNIIGSSR 190
F + DF LL ALC+ ++V+ A+ + KD F + KS+ I+L GW R
Sbjct: 208 FGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLR 267
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E V+ EM G D V++ +I+ + KAR + LF +M+ +Y +I
Sbjct: 268 LDE-VYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLI 326
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L R + +A+ + + G P TYN+++ C++ ++D+A + DEM + G+
Sbjct: 327 NGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVG 386
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESM-RKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P RTY L + R +E + + + M + GC+P+ TY ++++ F + +
Sbjct: 387 PQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALR 446
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
VW+E+ G P ++ LI++L KL+EA +Y+ EM + + P
Sbjct: 447 VWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRP 493
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E Q+G Y +++ +I K + + L + M+ G+ ++ + + A+
Sbjct: 134 WAE-KQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGL-LTQETFALISRRYAR 191
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R VK+A+ + ME+ G+ P + +N L+ LCK+R ++ A++ FD+M R P I++
Sbjct: 192 ARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKS 251
Query: 316 YHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L+ + + L E R+M G +P TY +LI + R++ ++++++
Sbjct: 252 YTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKME 311
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
N P Y LI+ L +L EA Q++ K PE T
Sbjct: 312 ANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPT 356
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F ++T+++N ++ +G ++ + +W +M +G+ +F+ I Y++AR +
Sbjct: 141 FKYSTENYNALIEA----LGKIKQFKMIWNLVNDMRSKGLLTQE-TFALISRRYARARKV 195
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + F++M++ G++ +N ++ AL K R V+ A + M+++ P++ +Y L
Sbjct: 196 KEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTIL 255
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGC 341
++ + + L + + EM G P TY ++ R + L M C
Sbjct: 256 LEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKC 315
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
PT Y LI R+ + + +G P+ +Y A++ + + ++++A++
Sbjct: 316 MPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYR 375
Query: 402 YYMEMKEKQLLPEPKTDELL 421
EM++ + P+ +T +++
Sbjct: 376 IVDEMRKCGVGPQTRTYDII 395
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+ G + + YNA+I AL K + K +L+ M KG+ T+ + + +ARK+
Sbjct: 137 KQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQE-TFALISRRYARARKV 195
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
EA + F E M K G QP + L+
Sbjct: 196 KEAVETF--------------------------------EKMEKFGLQPVLSDFNRLLDA 223
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ R +V++++ + PD SYT L+ L + Y EMK++ P+
Sbjct: 224 LCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPD 283
Query: 415 PKTDELL 421
T +L
Sbjct: 284 AVTYGIL 290
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 205/404 (50%), Gaps = 11/404 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++V+ LV ++L+ NDW AAF FF+W G Q GY H Y M+ ILGK ++FD
Sbjct: 1405 CSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLM 1464
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W LI++M E G L++ T+ ++RR AI+AF+ RF + L
Sbjct: 1465 WGLINQMV--EVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVL 1521
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L LC+ ++V+ A + + P + SFN +++GWC +EA EM Q G
Sbjct: 1522 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKA-RMLKEALDTMEEMKQHGF 1580
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VV+++ ++ Y ++ V L D+M++ + Y ++HAL K ++A+
Sbjct: 1581 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 1640
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
++E GVAP+ YNSLI L +A +L++A +EM GI+P + T++ +
Sbjct: 1641 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 1700
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV--FKVWNEISENGNGPD 379
E LL M + C P TY L+K + RQ+ + F V + ++ + PD
Sbjct: 1701 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK-RQWVKILLFLVCHMFRKDIS-PD 1758
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
S+YT L+ L NGK+ ++ + EM K P+ +T +L+ +
Sbjct: 1759 FSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVME 1802
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 205/404 (50%), Gaps = 11/404 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++V+ LV ++L+ NDW AAF FF+W G Q GY H Y M+ ILGK ++FD
Sbjct: 1446 CSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLM 1505
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W LI++M E G L++ T+ ++RR AI+AF+ RF + L
Sbjct: 1506 WGLINQMV--EVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVL 1562
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L LC+ ++V+ A + + P + SFN +++GWC +EA EM Q G
Sbjct: 1563 LDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKA-RMLKEALDTMEEMKQHGF 1621
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VV+++ ++ Y ++ V L D+M++ + Y ++HAL K ++A+
Sbjct: 1622 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 1681
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
++E GVAP+ YNSLI L +A +L++A +EM GI+P + T++ +
Sbjct: 1682 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 1741
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV--FKVWNEISENGNGPD 379
E LL M + C P TY L+K + RQ+ + F V + ++ + PD
Sbjct: 1742 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK-RQWVKILLFLVCHMFRKDIS-PD 1799
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
S+YT L+ L NGK+ ++ + EM K P+ +T +L+ +
Sbjct: 1800 FSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVME 1843
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 214/408 (52%), Gaps = 12/408 (2%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S ++M++ +E + +S+EL+ VL VR + A FF + K+ G+ H++
Sbjct: 52 SSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSV 111
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
TM+ ILG+ RKFD W ++ +++ + PSL++ +T+++++ R V V + + +F
Sbjct: 112 DTMLYILGRSRKFDKIWDVLLDVKFKD--PSLISLRTVMVVLGRIAKVCSVRQTVESFRK 169
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
+K+F + F LL LC+ K++ DA ++ K +F N ++FNI+L+GW S
Sbjct: 170 FKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGW----KS 225
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
S EAE + EM + G+ DVVS++C++ Y K R + K ++ +M+ I D Y +
Sbjct: 226 SEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTS 285
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A +++K M+E G P+V YN+ I+ C A++L EA DEM+ +G
Sbjct: 286 IIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKG 345
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+SP TY+ F I + + L M GC P + + L++ F ++ +
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++WN++ + G G L L GKL EA +++M +K P
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKP 453
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Query: 185 IIGSSREAERVW-MEMSQRGICYDVVSFSCIISCY---SKARNLHKVLRLFDQMKRMGIE 240
I+G SR+ +++W + + + ++S ++ +K ++ + + F + K+ E
Sbjct: 117 ILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPE 176
Query: 241 CDRKVYNAVIHALAKGRLVKDAISL---MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D +NA++ L + + + DA ++ +KSM PN+ T+N L L + +EA
Sbjct: 177 FDVTCFNALLRTLCQEKSMMDARNVYHGLKSM----FRPNLQTFNIL---LSGWKSSEEA 229
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
FDEM++ G+ P + +Y+ +D+ R ++ F ++ MR TY +I
Sbjct: 230 EGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGG 289
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Q + E+ E G PD ++Y A I + +L EA EM K L P
Sbjct: 290 LGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPN 349
Query: 415 PKTDELL 421
T L
Sbjct: 350 ATTYNLF 356
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 194/399 (48%), Gaps = 15/399 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG--YAHSTREYHTMIAILGKVRKFDTAWA 86
+ + V E LS NDW A FF W+ G + + ILGK +F A +
Sbjct: 27 LDAAAVQETLSLYTNDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEFPQATS 86
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQG 143
L+ T P+ + + L L+ R A + V A+ AF + +VG+ D F
Sbjct: 87 LL-LAHHDPTDPAFL-RPALRALLNRLAAANLVDDAVRAFESTAA---SVGLRDEASFHL 141
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWCNIIGSSREAERVWMEM 199
L+ ALC ++ V +A HL + P TK+ N++L GW +R + W++M
Sbjct: 142 LIDALCDHRRVDEAHHLCLGGRAAAPPPFPPGTKTHNLLLRGWAKARAWARLRQH-WLDM 200
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RG+ D+ S+S + +K+ K ++LF +MK+ + D YN IHA+ V
Sbjct: 201 DARGVAKDLHSYSIYMDALAKSGKPWKAVKLFKEMKQKRLPVDIVAYNIAIHAVGLAEGV 260
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A+ + + M E G PN T+N+++K LCK + E +M + G P TYH F
Sbjct: 261 DFAVRMYRQMIEAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHKAGCEPNELTYHCF 320
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ +EV L E M + GC+P DTY+MLIK+F RW VF VW + E G PD
Sbjct: 321 FQYLSRPQEVLALFEKMLQRGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLTPD 380
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+Y LI AL G ++ A +Y EM K L P+P+ +
Sbjct: 381 AFAYNTLIDALLEKGMVDLARKYDEEMLAKGLSPKPRKE 419
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 214/408 (52%), Gaps = 12/408 (2%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S ++M++ +E + +S+EL+ VL VR + A FF + K+ G+ H++
Sbjct: 52 SSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSV 111
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
TM+ ILG+ RKFD W ++ +++ + PSL++ +T+++++ R V V + + +F
Sbjct: 112 DTMLYILGRSRKFDKIWDVLLDVKFKD--PSLISLRTVMVVLGRIAKVCSVRQTVESFRK 169
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
+K+F + F LL LC+ K++ DA ++ K +F N ++FNI+L+GW S
Sbjct: 170 FKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGW----KS 225
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
S EAE + EM + G+ DVVS++C++ Y K R + K ++ +M+ I D Y +
Sbjct: 226 SEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTS 285
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A +++K M+E G P+V YN+ I+ C A++L EA DEM+ +G
Sbjct: 286 IIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKG 345
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+SP TY+ F I + + L M GC P + + L++ F ++ +
Sbjct: 346 LSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMAL 405
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++WN++ + G G L L GKL EA +++M +K P
Sbjct: 406 ELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKP 453
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Query: 185 IIGSSREAERVW-MEMSQRGICYDVVSFSCIISCY---SKARNLHKVLRLFDQMKRMGIE 240
I+G SR+ +++W + + + ++S ++ +K ++ + + F + K+ E
Sbjct: 117 ILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPE 176
Query: 241 CDRKVYNAVIHALAKGRLVKDAISL---MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D +NA++ L + + + DA ++ +KSM PN+ T+N L L + +EA
Sbjct: 177 FDVTCFNALLRTLCQEKSMMDARNVYHGLKSM----FRPNLQTFNIL---LSGWKSSEEA 229
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
FDEM++ G+ P + +Y+ +D+ R ++ F ++ MR TY +I
Sbjct: 230 EGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGG 289
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Q + E+ E G PD ++Y A I + +L EA EM K L P
Sbjct: 290 LGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPN 349
Query: 415 PKTDELL 421
T L
Sbjct: 350 ATTYNLF 356
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 201/403 (49%), Gaps = 9/403 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+ +++ GI++S E+ VL N A+ FF WA KQ Y HS R YH+MI L K
Sbjct: 9 LETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAK 68
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+R++ W L++ MR E ++ + I++R+Y V A+ F +++
Sbjct: 69 IRQYQMVWDLVNAMRNKE----ILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPN 124
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ F GLLSALC+ KNV+ A+ + KD F ++K+++I++ GW + A ++
Sbjct: 125 VAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPK-AREIYR 183
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM G D V++S ++ KA + + + + +M + +Y+ ++H
Sbjct: 184 EMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVEN 243
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++DA+S ME GV +V YN+LI CKA K+ + +M +G++P RT +
Sbjct: 244 RIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCN 303
Query: 318 AFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ +I GE E F + M K+ C+P D+Y M+IK F ++ K+W + +
Sbjct: 304 IIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKK 362
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P +++ LI+ L G +A EM EK + P T
Sbjct: 363 QFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGAT 405
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 114/218 (52%), Gaps = 4/218 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+V +F I+ Y++A+ + + + F+ M++ ++ + +N ++ AL K + V+ A +
Sbjct: 89 NVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIF 148
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RT 325
+M+++ V P+ TY+ LI+ +A L +AR+ + EM+ G P TY +D++ +
Sbjct: 149 DNMKDQFV-PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKA 207
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G +E +++ M C+P++ Y +L+ + + + + E+ NG D ++Y
Sbjct: 208 GRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAY 267
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
ALI A K++ ++ +M K + P +T ++
Sbjct: 268 NALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNII 305
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG Y M+ +L K + D A ++ EM PS +L+ Y +
Sbjct: 188 SGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYS---VLVHTYGVENR 244
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
+ A++ F +R + + L+SA C+ +++ ++ K V P N+++ N
Sbjct: 245 IEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNP-NSRTCN 303
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMK 235
II+N G + EA +++ M + +C DV S++ II + + L L+++ MK
Sbjct: 304 IIINSLIGR-GETDEAFKIFRRMIK--VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMK 360
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ ++ +I+ L + A L++ M EKG+ P+ T+ L L K + D
Sbjct: 361 KKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKD 420
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 134/314 (42%), Gaps = 58/314 (18%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA +TF + ++ + ++ +++ L K + A + D M+ S +T
Sbjct: 108 EAVYTFNVM--EKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDS----KT 161
Query: 106 LLILIRRYCAVHDVGRAINAFYA---YKRFKFAVGIED---FQGLLSALCRYKNVQDAEH 159
ILI + GRA N A Y+ + I D + ++ LC+ V +A
Sbjct: 162 YSILIEGW------GRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVE 215
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIIS 216
++ K++ N K + I + + G +A ++EM + G+ DV +++ +IS
Sbjct: 216 IV---KEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALIS 272
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKG----------RLVKD---- 261
+ KA + V R+ M G+ + + N +I++L +G R++K
Sbjct: 273 AFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPD 332
Query: 262 -------------------AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
A+ + K M++K P++ T++ LI LC+ +A +
Sbjct: 333 VDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLE 392
Query: 303 EMLQRGISPTIRTY 316
EM+++GI P+ T+
Sbjct: 393 EMIEKGIRPSGATF 406
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 306 QRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
QR ++R YH+ ++ IR + V+ L+ +MR + + ++++K++R ++
Sbjct: 49 QRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEILNV-EAFCIIMRKYARAQKVE 107
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+N + + P+ +++ L+ AL + + +A + + MK+ Q +P+ KT +L
Sbjct: 108 EAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKD-QFVPDSKTYSIL 165
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 9/403 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+ +++ GI+VS E+V +VL N A+ FF WA KQ Y HS R YHTMI L K
Sbjct: 9 LHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAK 68
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+R++ W LI+ M+ ++ +T I++R+Y + A+ F +++
Sbjct: 69 IRQYQIMWDLINAMKRKR----MLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPN 124
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ F GL SALC+ KNV+ A+ + +KD F ++K++ I+L GW + A ++
Sbjct: 125 LAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPK-AREIFR 183
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM G D+V++ ++ KA + + L + +M + +Y+ +IH
Sbjct: 184 EMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIEN 243
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++DA+ ME+ GV +V YN+LI CK K + +EM +G+ P RT +
Sbjct: 244 RIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLN 303
Query: 318 AFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L ++I GE E F + M K+ C+P DTY M+IK F + KVW + +
Sbjct: 304 IILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKK 362
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P +++ LI+ L G + A +M EK + P T
Sbjct: 363 HFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVT 405
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y M+ IL K + D A ++ EM P T +LI Y + +
Sbjct: 189 GCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKP---TSFIYSVLIHTYGIENRI 245
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFN 176
A++ F ++ + + L+ A C+ +KNV + M K + P N+++ N
Sbjct: 246 EDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEM-DYKGMQP-NSRTLN 303
Query: 177 IILNGWCNII--GSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQ 233
IILN N+I G + EA RV+ M + +C D +++ +I + + L L+++
Sbjct: 304 IILN---NLIARGETDEAFRVFRRMIK--VCEPDADTYTMMIKMFCERNELEMALKVWKY 358
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ ++ +I+ L + V A +++ M EKG+ P+ VT+ L L K
Sbjct: 359 MKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIK--- 415
Query: 294 LDEARQAFDEMLQRGISPTIR 314
E R+ E LQ+ I+ I+
Sbjct: 416 --EGREDVLEFLQQKINVLIK 434
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 182/386 (47%), Gaps = 61/386 (15%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V + LS NDW+ A FF W Q G+ H+T Y+ MI ILGK +FD W LI M+
Sbjct: 57 VRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKA 116
Query: 94 GETG-PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P+ VT + + +KR+ A +E+
Sbjct: 117 DPVAYPNHVTFR----------------------FVFKRYAAAHLVEE------------ 142
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
IL GW + G ++ W EM +RG+C + S+S
Sbjct: 143 -------------------------ILRGWFKM-GWWKKCREFWEEMDRRGVCKSLYSYS 176
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+ K+ + ++L+ +MK+ GI D YN VI A+ V +I + + M+E
Sbjct: 177 IYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEV 236
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGL 332
G PNVVTYN++IK LC+ ++ EA FD+M ++G +P + TYH F I +++
Sbjct: 237 GCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQILRT 296
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+ M G +P DTY+ML+KKF RW VF VW ++ E G PD +Y ALI AL
Sbjct: 297 FDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQ 356
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTD 418
G ++ A +Y EM K L +P+ D
Sbjct: 357 KGMVDLARKYEEEMLAKGLSAKPRVD 382
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 209/418 (50%), Gaps = 7/418 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR + ++ + E GI + L+ VLS + + FFLWA KQ GY HS
Sbjct: 73 ILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYE 132
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+M+ IL K+R+F W LI+EMR +T P L+ + ++L+RR+ + + V +A+
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMR--KTNPELIEPELFVVLMRRFASANMVKKAVEVL 190
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A + ++ FP N + F +L GWC
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCR-E 249
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M + G+ D+V F+ ++S Y+ A + L + M++ G E + Y
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 247 NAVIHALAKG-RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+I AL + + + +A+ + ME G ++VTY +LI CK +D+ D+M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 306 QRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G+ P+ TY + + EE L+E M++ GC P Y ++I+ + +
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++WNE+ NG P ++ +I+ G L EA ++ EM + + P+ L
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTL 487
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 208/414 (50%), Gaps = 7/414 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR + ++ + E GI + L+ VLS + + FFLWA KQ GY HS
Sbjct: 73 ILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYE 132
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+M+ IL K+R+F W LI+EMR +T P L+ + ++L+RR+ + + V +A+
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMR--KTNPELIEPELFVVLMRRFASANMVKKAVEVL 190
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A + ++ FP N + F +L GWC
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCR-E 249
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M + G+ D+V F+ ++S Y+ A + L + M++ G E + Y
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 247 NAVIHALAKG-RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+I AL + + + +A+ + ME G ++VTY +LI CK +D+ D+M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 306 QRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G+ P+ TY + + EE L+E M++ GC P Y ++I+ + +
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++WNE+ NG P ++ +I+ G L EA ++ EM + + P+
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 8/285 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
F LLS + DA LM K F N + +++ C EA RV++EM
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G D+V+++ +IS + K + K + D M++ G+ + Y ++ A K
Sbjct: 334 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++ + L++ M+ +G P+++ YN +I+ CK ++ EA + ++EM G+SP + T+
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 320 LDIIRTGEEVFGLLESMRKMGCQ-----PTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ + + ++M + P T L+ R + VW+ IS
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNK 513
Query: 375 GNGPDR--SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + S++T IHAL+ G ++EA Y ++M E L+P+P T
Sbjct: 514 TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNT 558
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 205/417 (49%), Gaps = 6/417 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ ++E G+ V S L VL+ + + FF+WA KQ GY HS
Sbjct: 64 ILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYE 123
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI ILGK+R+F WALI+EMR P V+ ++L+RR+ + V +AI
Sbjct: 124 VYKAMIKILGKMRQFGAVWALIEEMR--RENPQFVSPYVFVVLMRRFASARMVKKAIEVL 181
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A L + F K F +L GWC
Sbjct: 182 DEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCR-E 240
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V +++ + G D+V ++ +++ Y+ A + L +M+R E + +
Sbjct: 241 GKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSF 300
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I AL + +++A+ + M+ G + VTY +LI CK K+ + + D M+Q
Sbjct: 301 TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQ 360
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P TY + EE+ L+E MRK+GC P + Y ++I+ + +
Sbjct: 361 QGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKE 420
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+VWNE+ G P ++ +IH L EA +++ EM + LL P+ L
Sbjct: 421 GVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTL 477
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 209/393 (53%), Gaps = 8/393 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ECG+++S +LV +VL ++ + AF FF AGK+ G+AH +R Y+ M+ +LG+ R+F
Sbjct: 57 LDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQF 116
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
+T A ++EM GE G L+T +T I I+ + + + F K++ F VG++
Sbjct: 117 ETMVAKLEEM--GEKG--LLTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVI 172
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL +L K ++A+ + KD F + +++ I+L+GWC + + EA RVW EM
Sbjct: 173 NFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRL-KNLLEAGRVWNEMID 231
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
RG D+V+ + ++ K + ++LF+ MK G + + Y +I K +L+ +
Sbjct: 232 RGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGE 291
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
AI M ++G P+ Y LI + +K+D EM +RG P RTY+A +
Sbjct: 292 AIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIK 351
Query: 322 IIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
++ + ++ + + M + G +PT TY M++K + + + ++W+E+ G P
Sbjct: 352 LMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCP 411
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
D +SY I L + EA +Y EM EK +
Sbjct: 412 DDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGM 444
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 214/412 (51%), Gaps = 9/412 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++EC + +S LV VL ++ + AF FF WAG+++G+ H++R Y+ M+++LG+
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F++ ++ EM GE G L+T +T I I+ + A + +A+ F KR+ F G
Sbjct: 282 TRQFESMMGMLGEM--GEKG--LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAG 337
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ LL L R K ++A+ L +D F N +++ ++LNGWC I + EA R W
Sbjct: 338 VDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCR-IKNLVEAGRTWN 396
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +G D+++ ++ K + ++LF+ MK G + + Y +I L K
Sbjct: 397 EMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQM 456
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K+A+ M + G P+ Y LI +K+D+ EM ++G RTY+
Sbjct: 457 KMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYN 516
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + ++ + ++ + + M + G QPT TY M++K + R + VW E+
Sbjct: 517 ALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRK 576
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
G PD +SY I L +G+ EEA +Y EM EK + P+ ++ D+S
Sbjct: 577 GCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFS 628
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC-----RYKNVQDAEHLMFC---NKDV 167
V V R I+ +A R AV E L AL R+K+ + FC K
Sbjct: 205 VSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAG 264
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F N++++N +++ ++G +R+ E + EM ++G+ + +FS I ++ A+
Sbjct: 265 FTHNSRTYNAMMS----VLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKER 319
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + +F+ MKR + N ++ L + +L K+A +L + +E++ PN+ TY L
Sbjct: 320 KKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVL 378
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+ C+ + L EA + ++EM+ +G P I +H L+ + + + L E M+ G
Sbjct: 379 LNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 438
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI+ + + + ++E+ ++G PD + YT LI K+++ +
Sbjct: 439 SPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYA 498
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMKEK + +T L N+Q + +
Sbjct: 499 LLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAV 532
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 5/237 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ +HTM+ L K +K A L + M+ P++ +T ILIR C +
Sbjct: 402 GFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNV---RTYTILIRDLCKQMKM 458
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNII 178
A+ F + L++ K + L+ K+ P + +++N +
Sbjct: 459 KEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNAL 518
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ N +A R++ +M Q GI + +++ ++ Y RN ++ +M R G
Sbjct: 519 IKLMTNR-QMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKG 577
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D Y I L + ++A ++ M EKG+ + YN +A K D
Sbjct: 578 CCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPD 634
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 205/413 (49%), Gaps = 6/413 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ + E G+++ L+ VL+ + + FF+WA KQ Y HS
Sbjct: 90 ILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIE 149
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y +M+ IL K+R+F W LI+EMR + P L+ + ++L++R+ + V +AI
Sbjct: 150 VYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASADMVKKAIEVL 207
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F F LL ALC++ +V+DA L + FP N + F +L GWC
Sbjct: 208 DEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCRE- 266
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
EA+ V ++M + G D+V ++ ++S Y+ A + L M+R G E + Y
Sbjct: 267 EKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCY 326
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I AL K +++A+ + ME +VVTY +L+ CK K+D+ D+M++
Sbjct: 327 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIK 386
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G+ P+ TY + E E L+E M+++ P Y ++I+ + +
Sbjct: 387 KGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKE 446
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++WNE+ NG P ++ +I+ L G L EA ++ EM + L P+
Sbjct: 447 AVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGLFSVPQ 499
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 4/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F ++ ++ A + K + + D+M G+E D V+ ++ AL K VKDA L + M
Sbjct: 187 FVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 246
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+ N+ + SL+ C+ K+ EA+ +M + G P I Y L
Sbjct: 247 LR-FPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA 305
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + LL+ MR+ G +P Y +LI+ + + KV+ E+ D +YTAL+
Sbjct: 306 DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 365
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK+++ + +M +K L+P T
Sbjct: 366 SGFCKWGKIDKCYLVLDDMIKKGLMPSQLT 395
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 201/399 (50%), Gaps = 9/399 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++ G++VS ++V +VL N A+ FF WA KQ Y HS + +HT+I L K+R++
Sbjct: 13 LDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQY 72
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W ++ M+ +V +T I++R+Y V A+ F ++ + F
Sbjct: 73 QLMWDVVKVMKSKR----MVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAF 128
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALC+ KNV+ A+ + KD F ++K+++I+L GW + A ++ EM
Sbjct: 129 NGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPK-AREIFREMVS 187
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D+V++ ++ KA + + L + ++M + +Y+ ++H ++D
Sbjct: 188 NGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIED 247
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+S ME G+ P+V YN+LI CKA +L + +EM +G++P RT++ L
Sbjct: 248 AVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILS 307
Query: 321 DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+I GE E + + M K+ C+P DTY M+IK F + KVW + P
Sbjct: 308 SLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMP 366
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ LI+ L G + +A EM EK + P T
Sbjct: 367 SMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVT 405
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ +L K + D A +++EM P T +L+ Y + + A++ F
Sbjct: 197 YGIMVDVLCKAGRVDEALGIVNEMDSTVCKP---TPFIYSVLVHTYGIENRIEDAVSTFL 253
Query: 128 AYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + + L+ A C R KNV + M C K V P N+++FNIIL+
Sbjct: 254 EMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDC-KGVTP-NSRTFNIILSSLIG 311
Query: 185 IIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G + EA RV++ M + +C D +++ +I + + L K L+++ MK
Sbjct: 312 R-GETDEAYRVFLRMIK--VCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSM 368
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ +I+ L + V A L++ M EKG+ P+ VT+ L + L K E R+ +
Sbjct: 369 HTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIK-----EGREDVLK 423
Query: 304 MLQRGIS 310
LQ+ I+
Sbjct: 424 FLQKKIN 430
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 14/432 (3%)
Query: 3 TLVDILREFSHKRSEMRNKIE--ECGI-----KVSSELVSEVLSWVRNDWEAAFTFFLWA 55
TL ++ E S S+ RN E G+ VS++LV +VL +N +A FFLWA
Sbjct: 46 TLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWA 105
Query: 56 GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA 115
+ G+ S YH ++ ILG +F W + E+R ET S++T + + Y
Sbjct: 106 KRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIR--ETRSSVITHELFWHVFTAYSR 163
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 175
AI AF F G++D LL LC+ K+V A+ K VF + K++
Sbjct: 164 ADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTY 223
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+I+ GW ++G S A++V+ EM +RG DV++++ ++ K + ++F +M
Sbjct: 224 SILTRGW-GVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMD 282
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y+ I + + + +++ + K + PNV TYN +IK LCK + ++
Sbjct: 283 SNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVE 342
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
EA Q DEM++RG++P +Y+A EV L++ M + C P TY M++
Sbjct: 343 EAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVL 402
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG-KLEEAHQYYMEMKEKQL 411
K R +F +VW + + G P S+Y +IH KLEEA +Y+ M ++ +
Sbjct: 403 KLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI 462
Query: 412 LPEPKTDELLQD 423
P T ELL+D
Sbjct: 463 PPYIATVELLRD 474
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 213/400 (53%), Gaps = 14/400 (3%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++E +++S +L+ +VL R+ + AF FF WA ++ G+AH +R Y++M++IL K
Sbjct: 157 MEAVLDEMKVELSHDLIVKVLERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMSILAK 216
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T ++++EM G G L+T +T I ++ + A + +A+ F K++KF +G
Sbjct: 217 TRQFETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 272
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER 194
+E LL +L R K ++A+ L K+ F N ++ ++LNGWC N+I EA R
Sbjct: 273 VETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI----EAAR 328
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+W +M +G+ D+V+ + ++ ++R ++LF MK G + + Y +I
Sbjct: 329 IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 388
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K ++ AI M + G+ P+ Y LI +KLD + EM ++G P +
Sbjct: 389 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 448
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+A + ++ + E + M + +P+ T+ M++K + R + VW+E+
Sbjct: 449 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEM 508
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ G PD +SYT LI L GK EA +Y EM +K +
Sbjct: 509 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 548
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 167/358 (46%), Gaps = 26/358 (7%)
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE-----DFQG 143
D+ G E G S V T + R C V I+ +A R AV E
Sbjct: 119 DDDVGIEIGVSCVDSSTNPEEVERVCKV------IDELFALDRNMEAVLDEMKVELSHDL 172
Query: 144 LLSALCRYKNVQDAEHLMFC---NKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWM 197
++ L R+++ + FC K F +++++N +++ I+ +R+ E V
Sbjct: 173 IVKVLERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMS----ILAKTRQFETMVSVLE 228
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +G+ + +F+ + ++ A+ K + +F+ MK+ + + N ++ +L + +
Sbjct: 229 EMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK 287
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
L K+A L ++E+ PN++TY L+ C+ R L EA + +++M+ +G+ P I ++
Sbjct: 288 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 346
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+ + R + L M+ G P +Y ++I+ F + + ++++ ++
Sbjct: 347 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 406
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G PD + YT LI KL+ ++ EM+EK P+ KT L N++ E
Sbjct: 407 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 464
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 211/400 (52%), Gaps = 14/400 (3%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++E + +S +L+ EVL R+ + AF FF WA ++ G+AH +R Y++M++IL K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T ++++EM G G L+T +T I ++ + A + +A+ F K++KF +G
Sbjct: 208 TRQFETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 263
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER 194
+E LL +L R K ++A+ L K+ F N ++ ++LNGWC N+I EA R
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI----EAAR 319
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+W +M +G+ D+V+ + ++ ++R ++LF MK G + + Y +I
Sbjct: 320 IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K ++ AI M + G+ P+ Y LI +KLD + EM ++G P +
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+A + ++ + E + M + +P+ T+ M++K + R + VW E+
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ G PD +SYT LI L GK EA +Y EM +K +
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 165/352 (46%), Gaps = 26/352 (7%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE-----DFQGLLSALC 149
ETG S V T + R C V I+ +A R AV E ++ L
Sbjct: 116 ETGVSCVESSTNPEEVERVCKV------IDELFALDRNMEAVLDEMKLDLSHDLIVEVLE 169
Query: 150 RYKNVQDAEHLMFC---NKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRG 203
R+++ + FC + F +++++N +++ I+ +R+ E V EM +G
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 225
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + +F+ + ++ A+ K + +F+ MK+ + + N ++ +L + +L K+A
Sbjct: 226 L-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L ++E+ PN++TY L+ C+ R L EA + +++M+ +G+ P I ++ L+ +
Sbjct: 285 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 324 ---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
R + L M+ G P +Y ++I+ F + + ++++ ++G PD
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+ YT LI KL+ ++ EM+EK P+ KT L N++ E
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 210/406 (51%), Gaps = 20/406 (4%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ ++ I +S+EL+ +VL VR + FF + G++ G+ H+ TM+ I
Sbjct: 44 LKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYTGRRKGFYHTAYSLDTMLYI 103
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ R FD W L+ E R + +++T +T+++++ R V V + + F +K+
Sbjct: 104 LGRSRMFDHVWELLIEARRKDQ--NVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVP 161
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
G+ F LL LC+ K++ DA ++ K F N ++FNI+L+GW N+ +AE
Sbjct: 162 DYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNILLSGWKNV----EDAEL 217
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
EM + G+ DVV+++ ++ Y K R + K ++FD+M+ + D Y +VI L
Sbjct: 218 FVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLG 277
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
A ++K M+E GV P+V YN+ I+ C A++L A + DEM+ +G+SP
Sbjct: 278 LVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNAT 337
Query: 315 TYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ F + ++ + L + M GC P + + LI+ F R + ++W E+
Sbjct: 338 TYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEM 397
Query: 372 SENGNGPDRSSYTALIHALF----LNGKLEEAHQYYMEMKEKQLLP 413
E G G SYT + LF GKL EA + ++EM EK P
Sbjct: 398 VEKGFG----SYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRP 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 12/212 (5%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIH---ALAKGRLVKDAISLMKSMEE----KGVAPN--VV 279
R+FD + + IE RK N + + GR+ K S+ +++E K + P+ V
Sbjct: 108 RMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAK-VCSVRQTVETFRKFKKIVPDYGVN 166
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
+N+L++ LC+ + + +AR + L+ P ++T++ L + E+ + M++M
Sbjct: 167 CFNALLRTLCQEKSMTDARNVYHS-LKHNFRPNLQTFNILLSGWKNVEDAELFVNEMKEM 225
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P TY L+ + + R+ +KV++E+ E PD +YT++I L L G+ ++A
Sbjct: 226 GVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKA 285
Query: 400 HQYYMEMKEKQLLPE-PKTDELLQDWSYNKQF 430
EMKE + P+ P + ++++ K+
Sbjct: 286 RDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRL 317
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 11/250 (4%)
Query: 179 LNGWCNIIGSSREAERVW-MEMSQRGICYDVVS---FSCIISCYSKARNLHKVLRLFDQM 234
L+ I+G SR + VW + + R +V++ ++ +K ++ + + F +
Sbjct: 97 LDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKF 156
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K++ + +NA++ L + + + DA ++ S++ PN+ T+N L L + +
Sbjct: 157 KKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKH-NFRPNLQTFNIL---LSGWKNV 212
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIML 351
++A +EM + G+ P + TY++ +D+ G E+ + + + MR+ P TY +
Sbjct: 213 EDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSV 272
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I Q V E+ E G PD +Y A I + +L A + EM K L
Sbjct: 273 IGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGL 332
Query: 412 LPEPKTDELL 421
P T L
Sbjct: 333 SPNATTYNLF 342
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 14/432 (3%)
Query: 3 TLVDILREFSHKRSEMRNKIE--ECGI-----KVSSELVSEVLSWVRNDWEAAFTFFLWA 55
TL ++ E S S+ RN E G+ VS++LV +VL +N +A FFLWA
Sbjct: 46 TLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWA 105
Query: 56 GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA 115
+ G+ S YH ++ ILG +F W + E+R ET S++T + + Y
Sbjct: 106 KRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIR--ETRSSVITHELFWHVFTAYSR 163
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 175
AI AF F G++D LL LC+ K+V A+ K VF + K++
Sbjct: 164 ADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTY 223
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+I+ GW ++G S A++V+ EM +RG DV++++ ++ K + ++F +M
Sbjct: 224 SILTRGW-GVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMD 282
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y+ I + + + +++ + K + PNV TYN +IK LCK + ++
Sbjct: 283 SNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVE 342
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
EA Q DEM++RG++P +Y+A EV L++ M + C P TY M++
Sbjct: 343 EAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVL 402
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG-KLEEAHQYYMEMKEKQL 411
K R +F +VW + + G P S+Y +IH KLEEA +Y+ M ++ +
Sbjct: 403 KLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI 462
Query: 412 LPEPKTDELLQD 423
P T ELL+D
Sbjct: 463 PPYIATVELLRD 474
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 205/401 (51%), Gaps = 18/401 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ G+ VS +LV+EVL + N A FF WA +Q G+ +S +H +I LGK+++F
Sbjct: 111 LDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQF 170
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W+L++ MR S ++K T I++RRY V A+ F F + D+
Sbjct: 171 RLVWSLVEAMRCR----SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDY 226
Query: 142 QGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFNIILNGWCNIIGSSREA---ERV 195
L+ L + K V+ A H +F K F + K++ +++ GW G ++ + V
Sbjct: 227 NWLIDILSKSKQVKKA-HAIFKEMKRKGRFIPDLKTYTVLMEGW----GHEKDLLMLKAV 281
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM GI DVV++ +IS + K+ + +++F +M+ G VY +I+ L
Sbjct: 282 YQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGS 341
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A+ + +E G V T N++I C+A + A + DEM + GI P RT
Sbjct: 342 MERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRT 401
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L+ +I++ EE + L + M + GC+P +TY M++ F + KVW ++
Sbjct: 402 YDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMK 461
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E G P ++ALI+ L + +LEEA Y+ EM +K + P
Sbjct: 462 EKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRP 502
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+A ++ F E F L+ AL + K + L+ + + +F II+ +
Sbjct: 143 WAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKIIVRRYARA- 201
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKV 245
+EA + +MS G+ D+ ++ +I SK++ + K +F +MKR G D K
Sbjct: 202 RKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKT 261
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ + + ++ + M + G+ P+VV Y LI CK+ K DEA + F EM
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 306 QRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ G P+ Y ++ + + E E + ++ G T +I + R +F
Sbjct: 322 ESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFH 381
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ FK+ +E+ ++G GP+ +Y +++ L + K+EEA+ + M+ PE T
Sbjct: 382 HAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNT 436
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G Y +I+ K K D A + EM PS +LI ++
Sbjct: 288 AGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPS---PHVYCMLINGLGSMER 344
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+ A+ F K F + + ++ A CR A ++ K NT++++I
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
ILN ++I S + EA ++ M + G ++ +++ ++ + + L+++ QMK
Sbjct: 405 ILN---HLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMK 461
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ +++A+I+ L +++A + M +KG+ P +++L + L + ++
Sbjct: 462 EKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRIT 521
Query: 296 EARQAFD--EMLQR 307
A++ EML+R
Sbjct: 522 LAQEVTQRLEMLRR 535
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 189/395 (47%), Gaps = 9/395 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+ + G++VS +LV VL N AF FF WA KQ GY+HS R YH MI L K+R++
Sbjct: 35 LNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQY 94
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W L+ MR ++ +T I++R+Y + V A+ F ++ + F
Sbjct: 95 QIVWDLVSAMR----KKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAF 150
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALC+ NV+ A+ + K F + KS++I+L GW R A V+ EM +
Sbjct: 151 NGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPR-AREVFREMVE 209
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G DVV++ ++ KA + + + + +M +Y+ ++H ++D
Sbjct: 210 AGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIED 269
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
AI M +KG+ +VV YN+LI CK K + EM G++P RT + +
Sbjct: 270 AIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIIS 329
Query: 321 DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+I G + F + M K+ C+P DTY M+IK F + K+W + P
Sbjct: 330 SMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVP 388
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++ALI L +A EM EK + P
Sbjct: 389 SMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRP 423
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 190 REAERVW---MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
R+ + VW M ++G+ +V +F ++ Y++A + + + F+ M + + + +
Sbjct: 92 RQYQIVWDLVSAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAF 150
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL K V+ A + +M+ + V P+ +Y+ L++ KA L AR+ F EM++
Sbjct: 151 NGLLSALCKSNNVRKAQEIFDAMKGQFV-PDEKSYSILLEGWGKAPNLPRAREVFREMVE 209
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGN 363
G P + TY +D++ V +E +++M C+PT+ Y +L+ + + +
Sbjct: 210 AGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIED 269
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ E+++ G D +Y ALI A K + H+ EM+ + P +T
Sbjct: 270 AIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRT 323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 117/295 (39%), Gaps = 48/295 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G Y M+ +L K + D A ++ EM G P T +L+ Y H
Sbjct: 209 EAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRP---TSFIYSVLVHTYGVEH 265
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKS 174
+ AI+ F + + + L+ A C+ +KNV
Sbjct: 266 RIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVH------------------- 306
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
RV EM G+ + + + IIS + R+F +M
Sbjct: 307 -------------------RVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM 347
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ E D Y +I + ++ A+ + K M+ K P++ T+++LIK LC+
Sbjct: 348 IKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNA 406
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-EEVFGLL-ESMRKMGCQPTND 346
+A +EM+++GI P+ T+ +I+ G E+V L E M + +P D
Sbjct: 407 AKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEPLYD 461
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 192/396 (48%), Gaps = 51/396 (12%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V + LS NDW+ A FF W Q G+ H+T Y+ MI ILGK +FD W LI M+
Sbjct: 292 VRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKA 351
Query: 94 GETG-PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P+ VT + +RY A H V A+NA+Y + F + L+ ALC YK
Sbjct: 352 DPVAYPNHVT---FRFVFKRYAAAHLVEEAMNAYYRTEEFNLR-DETSYSNLIDALCEYK 407
Query: 153 NVQDAEHLMFC-NKD-VFPFNTKSFNIILNGW--------CNIIGSSREAERVWMEMSQR 202
+V +AE L +KD VF + K +NIIL GW C G A +++ EM ++
Sbjct: 408 HVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKNGVVEECKS-GKPWRAVKLYKEMKKK 466
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
GI DVV+++ +I + + +R+F + K +G E + YN +I L + +++A
Sbjct: 467 GIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIREA 526
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ M EKG APNV+TY+ + K +++ + FD M+ G+ P + T
Sbjct: 527 YGVFDQMREKGYAPNVITYHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDT------- 576
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
Y+ML+KKF RW VF VW ++ E G PD +
Sbjct: 577 -------------------------YVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACA 611
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
Y ALI AL G ++ A +Y EM K L +P+ D
Sbjct: 612 YNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVD 647
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 204/401 (50%), Gaps = 18/401 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ G+ VS +LV+EVL + N A FF WA +Q G+ +S +H +I LGK+++F
Sbjct: 111 LDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQF 170
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W+L++ MR S ++K T I++RRY V A+ F F + D+
Sbjct: 171 RLVWSLVEAMRCR----SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDY 226
Query: 142 QGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFNIILNGWCNIIGSSREA---ERV 195
L+ L + K V+ A H +F K F + K++ +++ GW G ++ + V
Sbjct: 227 NWLIDILSKSKQVKKA-HAIFKEMKRKGRFIPDLKTYTVLMEGW----GHEKDLLMLKAV 281
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM GI DVV++ +IS + K+ + +++F +M+ G VY +I+ L
Sbjct: 282 YQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGS 341
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A+ + +E G V T N++I C+A + A + DEM + GI P RT
Sbjct: 342 MERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRT 401
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L+ +I++ EE + L + M + GC+P +TY M++ F + KVW ++
Sbjct: 402 YDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMK 461
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E G P ++ALI+ L +LEEA Y+ EM +K + P
Sbjct: 462 EKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 502
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+A ++ F E F L+ AL + K + L+ + + +F II+ +
Sbjct: 143 WAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKIIVRRYARA- 201
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKV 245
+EA + +MS G+ D+ ++ +I SK++ + K +F +MKR G D K
Sbjct: 202 RKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKT 261
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ + + ++ + M + G+ P+VV Y LI CK+ K DEA + F EM
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 306 QRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ G P+ Y ++ + + E E + ++ G T +I + R +F
Sbjct: 322 ESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFH 381
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ FK+ +E+ ++G GP+ +Y +++ L + K+EEA+ + M+ PE T
Sbjct: 382 HAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNT 436
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 114/289 (39%), Gaps = 50/289 (17%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G Y +I+ K K D A + EM PS +LI ++
Sbjct: 288 AGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPS---PHVYCMLINGLGSMER 344
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNI 177
+ A+ F K F + + ++ A CR A ++ K NT++++I
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
ILN ++I S + EA ++ M + G ++ +++ ++ + + L+++ QMK
Sbjct: 405 ILN---HLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMK 461
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
EKGV P + +++LI LC +L+
Sbjct: 462 -----------------------------------EKGVLPCMHMFSALINGLCFENRLE 486
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTG------EEVFGLLESMRK 338
EA F EML +GI P + + + + G +EV LE +R+
Sbjct: 487 EACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRR 535
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 199/410 (48%), Gaps = 9/410 (2%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
S + E+ + E GI+VS +V VL N A+ FF WAGKQ Y HS R YHT
Sbjct: 23 ISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHT 82
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
MI L K+R++ W L+++MR + ++ +T I++R+Y V A+ F +
Sbjct: 83 MIESLAKIRQYQIMWDLVNKMRSLK----ILNVETFCIIMRKYARSQKVKEAVYTFNIME 138
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
++ + F LLSALC+ KNV A+ + KD F ++K+++I+L GW +
Sbjct: 139 KYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNLPK 198
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A ++ EM G D+V++ ++ KA + + + + +M + +Y+ ++
Sbjct: 199 -AREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLV 257
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H ++DA+ ME + +V YN+LI CK KL A + +EM +GI
Sbjct: 258 HTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIR 317
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P RT + L+ +I G +E F + M K+ C P DTY M+IK F + KV
Sbjct: 318 PNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKV 376
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
W + P +++ LI+ L G +A EM EK + P T
Sbjct: 377 WKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVT 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 48/289 (16%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ IL K + D A ++ EM P T +L+ Y + + A+ F
Sbjct: 218 YGIMVDILCKAGRVDEAVGIVKEMDSSVCKP---TSFIYSVLVHTYGIENRIEDAVYTFL 274
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+R + + + L+ A C+ +++A + M C K + P N+++ NIILN +
Sbjct: 275 DMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDC-KGIRP-NSRTCNIILNSLIS 332
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + EA RV+ M + +C + D
Sbjct: 333 C-GDTDEAFRVFRRMIK--VC----------------------------------DPDAD 355
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I + ++ A+ + K M K P++ T++ LI LCK +A +EM
Sbjct: 356 TYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEM 415
Query: 305 LQRGISPTIRTYHAFLD-IIRTG-EEVFGLL-ESMRKMGCQPTNDTYIM 350
+++GI P+ T+ +I+ G E+V L E M + +P D I+
Sbjct: 416 IEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCDQEII 464
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 211/400 (52%), Gaps = 14/400 (3%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++E + +S +L+ EVL R+ + AF FF WA ++ G+AH++R Y++M++IL K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T ++++EM G G L+T +T I ++ + A + +A+ F K++KF +G
Sbjct: 208 TRQFETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 263
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER 194
+E LL +L R K ++A+ L K+ F N ++ ++LNGWC N+I EA R
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI----EAAR 319
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+W +M G+ D+V+ + ++ ++ ++LF MK G + + Y +I
Sbjct: 320 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K ++ AI M + G+ P+ Y LI +KLD + EM ++G P +
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+A + ++ + E + M + +P+ T+ M++K + R + VW+E+
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 499
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ G PD +SYT LI L GK EA +Y EM +K +
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 172/374 (45%), Gaps = 40/374 (10%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE-----DFQGLLSALC 149
ETG S V T + R C V I+ +A R AV E ++ L
Sbjct: 116 ETGVSCVESSTNPEEVERVCKV------IDELFALDRNMEAVLDEMKLDLSHDLIVEVLE 169
Query: 150 RYKNVQDAEHLMFC---NKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRG 203
R+++ + FC + F ++++N +++ I+ +R+ E V EM +G
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHASRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 225
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + +F+ + ++ A+ K + +F+ MK+ + + N ++ +L + +L K+A
Sbjct: 226 L-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
L ++E+ PN++TY L+ C+ R L EA + +++M+ G+ P I ++ L+ +
Sbjct: 285 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 323 IRT--GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+R+ + L M+ G P +Y ++I+ F + + ++++ ++G PD
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ YT LI KL+ ++ EM+EK P+ KT YN + L A
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT--------YN------ALIKLMA 449
Query: 441 HQPQSGQNTRVISK 454
+Q TR+ +K
Sbjct: 450 NQKMPEHGTRIYNK 463
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 213/412 (51%), Gaps = 9/412 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++EC + +S LV VL ++ + AF FF WAG+++G+ H++R Y+ M+++LG+
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F++ ++ EM GE G L+T +T I I+ + A + +A+ F KR+ F G
Sbjct: 282 TRQFESMMGMLGEM--GEKG--LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAG 337
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ LL L R K ++A+ L +D F N +++ ++LNGWC I + EA R W
Sbjct: 338 VDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRI-KNLVEAGRTWN 396
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +G D+++ ++ K + ++LF+ MK G + + Y +I L K
Sbjct: 397 EMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQM 456
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+++A+ M + G P+ Y LI +K+D+ EM ++G RTY+
Sbjct: 457 KMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYN 516
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + ++ + ++ + + M + G Q T TY M++K + R + VW E+
Sbjct: 517 ALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRK 576
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
G PD +SY I L +G+ EEA +Y EM EK + P+ ++ D+S
Sbjct: 577 GCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFS 628
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC-----RYKNVQDAEHLMFC---NKDV 167
V V R I+ +A R AV E L AL R+K+ + FC K
Sbjct: 205 VSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAG 264
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F N++++N +++ ++G +R+ E + EM ++G+ + +FS I ++ A+
Sbjct: 265 FTHNSRTYNAMMS----VLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKER 319
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + +F+ MKR + N ++ L + +L K+A +L + +E++ PN+ TY L
Sbjct: 320 KKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVL 378
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+ C+ + L EA + ++EM+ +G P I +H L+ + + + L E M+ G
Sbjct: 379 LNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 438
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI+ + + + ++E+ ++G PD + YT LI K+++ +
Sbjct: 439 SPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYA 498
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMKEK + +T L N+Q + +
Sbjct: 499 LLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAV 532
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 5/237 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ +HTM+ L K +K A L + M+ P++ +T ILIR C +
Sbjct: 402 GFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNV---RTYTILIRDLCKQMKM 458
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNII 178
A+ F + L++ K + L+ K+ P + +++N +
Sbjct: 459 QEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNAL 518
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ N +A R++ +M Q GI + +++ ++ Y RN ++++M R G
Sbjct: 519 IKLMTNRQ-MPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKG 577
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D Y I L + ++A ++ M EKG+ + YN +A K D
Sbjct: 578 CCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPD 634
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 210/400 (52%), Gaps = 14/400 (3%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++E + +S +L+ EVL R+ + AF FF WA ++ G+AH +R Y++M++IL K
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T ++++EM G G L+T +T I ++ + A + +A+ F K++KF +G
Sbjct: 207 TRQFETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 262
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER 194
+E LL +L R K ++A+ L K+ F N ++ ++LNGWC N+I EA R
Sbjct: 263 VETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI----EAAR 318
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+W +M G+ D+V+ + ++ ++ ++LF MK G + + Y +I
Sbjct: 319 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 378
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K ++ AI M + G+ P+ Y LI +KLD + EM ++G P +
Sbjct: 379 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 438
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+A + ++ + E + M + +P+ T+ M++K + R + VW+E+
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 498
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ G PD +SYT LI L GK EA +Y EM +K +
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 173/374 (46%), Gaps = 40/374 (10%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE-----DFQGLLSALC 149
ETG S V T + R C V I+ +A R AV E ++ L
Sbjct: 115 ETGVSCVESSTNPEEVERVCKV------IDELFALDRNMEAVLDEMKLDLSHDLIVEVLE 168
Query: 150 RYKNVQDAEHLMFC---NKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRG 203
R+++ + FC + F +++++N +++ I+ +R+ E V EM +G
Sbjct: 169 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 224
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + +F+ + ++ A+ K + +F+ MK+ + + N ++ +L + +L K+A
Sbjct: 225 L-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
L ++E+ PN++TY L+ C+ R L EA + +++M+ G+ P I ++ L+ +
Sbjct: 284 VLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 323 IRT--GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+R+ + L M+ G P +Y ++I+ F + + ++++ ++G PD
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ YT LI KL+ ++ EM+EK P+ KT YN + L A
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT--------YN------ALIKLMA 448
Query: 441 HQPQSGQNTRVISK 454
+Q TR+ +K
Sbjct: 449 NQKMPEHGTRIYNK 462
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 211/423 (49%), Gaps = 13/423 (3%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A L +IL++ + + + E GI ++ELVS++L + AF F+WA Q+
Sbjct: 58 ADKLSEILKKRYSSEAAVVKALNESGIDATNELVSQILMRFDSHCVVAFGVFIWAKNQTS 117
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y H+ Y MI ILGK +KF W+L+++M+G SL T ++ RR
Sbjct: 118 YVHTPELYDYMIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVM---RRLAKARKYK 174
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
AI+ F +++ + E L+ AL + +V+DA KD ++ SFNI+++
Sbjct: 175 DAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIH 234
Query: 181 GWCNIIGSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
G+C +R A ++ EM + G DVVS+SC I+ Y + ++ V +FD+M+
Sbjct: 235 GYCK----ARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEK 290
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + Y V+HAL K R + +A+ + + M+ G P+ Y+SLI L ++ ++ +A
Sbjct: 291 GCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDA 350
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F++M ++G+ + Y+ + G LLE M C+P TY L+K
Sbjct: 351 WDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKM 410
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + + + + + +N D +YT L++ NGKLE A Y+ E K ++P
Sbjct: 411 CCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPM 470
Query: 415 PKT 417
KT
Sbjct: 471 VKT 473
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 216/420 (51%), Gaps = 15/420 (3%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVR----NDWEAAFTFFLWAG 56
+T+ I+ S R+ ++ ++ G+ +S++L+ +VL VR N ++A FF +
Sbjct: 60 VETVFRIVSSASSTRN-LKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQA-LAFFNYTN 117
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ H+ TM+ ILG+ R+FD W L+ +MR + SL++ +++ +++ R V
Sbjct: 118 KRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQ--SLISPRSVQVVLGRIAKV 175
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
V + + +F +K+ F LL LC+ K+++DA ++ K F + ++FN
Sbjct: 176 CSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFN 235
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+L+GW S+ EAE + EM + G+ DVVS++C+I Y K R + + ++ D+M+
Sbjct: 236 ILLSGW----KSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRD 291
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
I D Y ++I L A ++K M+E G P+V YN+ I+ C A +L +
Sbjct: 292 EQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGD 351
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
A DEM+ +G+SP TY+ F ++ GL + M+K GC P + + L +
Sbjct: 352 ADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTR 411
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F R + ++WN++ E G G L L GKL E + ++M EK P
Sbjct: 412 LFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKP 471
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR--MGIECDRKVYNAVIHALAKGRL 258
++G + S ++ ++R ++ L M+R + R V V+ +AK
Sbjct: 119 RKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSV-QVVLGRIAKVCS 177
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
VK + + ++ + +N+L++ LC+ + + +AR + L+ P +RT++
Sbjct: 178 VKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHS-LKHDFRPDLRTFNI 236
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L ++ EE G + MR+MG +P +Y LI + + R+ +KV +++ + P
Sbjct: 237 LLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISP 296
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
D SYT++I L L G+ ++A EMKE P+
Sbjct: 297 DVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 332
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 10/279 (3%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+ T +L + + A DEMR P +V+ L I YC ++ RA
Sbjct: 230 DLRTFNILLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCL---IDVYCKGREIERAYKVI 286
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCN 184
+ + + + + ++ L A ++ K+ +P + ++N + +C
Sbjct: 287 DKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYP-DVAAYNAAIRNFC- 344
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I +A+ + EM +G+ + +++ C+ + +L + L+ +MK+ G + +
Sbjct: 345 IANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQ 404
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ + V+ A+ L M EKG ++ + L LC KL E + +M
Sbjct: 405 SCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQM 464
Query: 305 LQRGISP---TIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
+++G P + R +++ E + L E M G
Sbjct: 465 IEKGHKPSNVSFRRIKVLMELANKHEALQNLTEKMAMFG 503
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 215/429 (50%), Gaps = 14/429 (3%)
Query: 6 DILREFSHKRSEMRNKIEECGIK-------VSSELVSEVLSWVRNDWEAAFTFFLWAGKQ 58
D++ E S S+ RN + + +S+ LV +VL +N +A FFLWA +
Sbjct: 42 DLVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRI 101
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G+ HS YH ++ ILG ++F W + E+R E+ ++ Q ++ R Y +
Sbjct: 102 PGFDHSKESYHILVDILGSSKQFALLWDFLIEIR--ESQDFEISPQVFWLVFRAYSRANL 159
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
AI AF F I+D LL LC+ K+ + A+ + K F K+++I+
Sbjct: 160 PSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSIL 219
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ GW +I G S A +V+ EM ++ DV++++ ++ + K + + ++F +M G
Sbjct: 220 VRGWGDI-GESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNG 278
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I+ D ++ I A + + A ++ M+ + PNV TYN +IK LCK K++EA
Sbjct: 279 IKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAY 338
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKF 355
Q +E+++R P +Y+A L EV L+ M K C P +Y ML+K
Sbjct: 339 QLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLL 398
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPE 414
R +F +VW + E G P S+Y+ ++H L GKLEEA +Y+ M ++ + P
Sbjct: 399 IRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPY 458
Query: 415 PKTDELLQD 423
T E+L++
Sbjct: 459 SSTVEILRN 467
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 10/214 (4%)
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E +V+ V A ++ L DAI M E G+ P + + L+ LCK + A+Q
Sbjct: 141 EISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQ 200
Query: 300 AFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIK 353
FD ++ +TY + DI GE V + + MR+ C Y L++
Sbjct: 201 IFDR-VKHQFQTRAKTYSILVRGWGDI---GESVSACKVFDEMREQQCAVDVLAYNSLLE 256
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F + + +K++ E+ NG PD +++ I A + A++ EMK L+P
Sbjct: 257 AFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVP 316
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
T + K+ VE L +SGQ
Sbjct: 317 NVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQ 350
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 13/408 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ C ++VS +V ++L +DW AAF FF+WAG Q GY H Y+ M+ ILGK ++F
Sbjct: 117 MDCCPVRVSGRMVDKILRRFGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQF 176
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D W LI +M E G LV+ T+ ++RR + AI+AF +F +
Sbjct: 177 DLLWGLIRQM--DEIG-CLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAM 233
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN--IIGSSREAERVWMEM 199
LL LC+ K+V+ A + + V P + SFN +++GWC ++ +R+ + EM
Sbjct: 234 NALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEARDTMK---EM 290
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G V++++ +I Y ++ V + ++M G + Y V+HAL K
Sbjct: 291 EEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRT 350
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A+ + ++ G P+ YNS+I L +A +L++A FDEM + GI PT+ ++
Sbjct: 351 QEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTM 410
Query: 320 LDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK-VWNEISENG 375
+ E +L M + C+P TY L+K + RQ+ + + +
Sbjct: 411 ISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCK-RQWMKILPFLICHMFRKD 469
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD S+Y L+ L NGK ++ + EM K +P+ +T +L+ +
Sbjct: 470 ISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVME 517
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 146/364 (40%), Gaps = 48/364 (13%)
Query: 4 LVDILREFSHKRS--EMRNKIEECGIKVSSELVSEVLSWVR--NDWEAAFTFFLWAGKQS 59
+VDIL +F + +++E G VS +++V+ + N W A F Q
Sbjct: 166 MVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFN-KMDQF 224
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G T+ + ++ L K + A + E+RG P + + L+ +C +
Sbjct: 225 GVVRDTKAMNALLDTLCKEKSVKRARGVFQELRG-VVPPD---ESSFNTLVHGWCQARML 280
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + F+ + + L+ A C K+ Q ++ C+K P N ++ I
Sbjct: 281 NEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRP-NVITYTI 339
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ G ++EA V+ ++ + G D ++ II +A L +FD+M R
Sbjct: 340 VMHAL-GKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRT 398
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE-------------------------- 271
GI ++N +I A ++A+ ++ MEE
Sbjct: 399 GIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKIL 458
Query: 272 ---------KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
K ++P+ TY L+ LC+ K ++ +EM+ +G P T+ ++
Sbjct: 459 PFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEK 518
Query: 323 IRTG 326
+ G
Sbjct: 519 LDKG 522
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 206/409 (50%), Gaps = 11/409 (2%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ--SGYAHSTREYHTM 71
K S + ++++ G++V+ E+ VL + N A+ FF WA +Q G AH+ R YHT+
Sbjct: 51 KASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTV 110
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
+A L K+R++ W ++ MR + +T I++R+Y A+ F +R
Sbjct: 111 VASLAKIRQYQLMWDVVAVMRK----EGVANVETFSIIMRKYARAQKFDEAVYTFNIMER 166
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
+ A + F LL ALC+ KNV+ A+ + + F + K+++I+L GW +
Sbjct: 167 YGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKM 226
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
E V+ +M G D+V++ ++ K + + + + M G + +Y+ ++H
Sbjct: 227 RE-VYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVH 285
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
++DA++ ME+ G+ P+VV YN+L+ CK +K D A + D+M GISP
Sbjct: 286 TYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISP 345
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
RT++ L+ +I G +E + + +M K C+P +DTY M+IK F + KVW
Sbjct: 346 NSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVW 404
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ P +++ LI+ L G++ +A +M EK + P T
Sbjct: 405 KYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 453
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 62/316 (19%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA +TF + ++ G AH+ +++++ L K + A + D+M P T
Sbjct: 156 EAVYTFNIM--ERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKM-NNRFSPDAKTYSI 212
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFK--FAVG----IEDFQGLLSALCRYKNVQDAEH 159
LL GRA N + + A G I + ++ ALC+ V++A
Sbjct: 213 LL---------EGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVC 263
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIIS 216
++ +D+ + I + + G +A +++M + GI DVV ++ +++
Sbjct: 264 VV---QDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVT 320
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD--------------- 261
+ K + R+ D M+ GI + + +N +++ L L KD
Sbjct: 321 AFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLIS--LGKDDEAYRVFRNMIKRCK 378
Query: 262 ---------------------AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
A+ + K M K P++ T++ LI LC ++ +A
Sbjct: 379 PDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVL 438
Query: 301 FDEMLQRGISPTIRTY 316
++M+++GI P T+
Sbjct: 439 LEDMIEKGIRPPGSTF 454
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 200/395 (50%), Gaps = 9/395 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++ G++VS E+V +VL+ RN + FF W+ KQ Y HS R YH MI K+R++
Sbjct: 55 LDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQY 114
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W LI+ MR + ++ +T I++R+Y V AI AF +++ + F
Sbjct: 115 KLMWDLINAMRKKK----MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 170
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALC+ KNV+ A+ + +D F ++K+++I+L GW + A V+ EM
Sbjct: 171 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPK-AREVFREMID 229
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D+V++S ++ KA + + L + M + +Y+ ++H +++
Sbjct: 230 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 289
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ ME G+ +V +NSLI CKA ++ + EM +G++P ++ + L
Sbjct: 290 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 349
Query: 321 DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+I GE E F + M K+ C+P DTY M+IK F ++ KVW + + G P
Sbjct: 350 HLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 408
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++ LI+ L ++A EM E + P
Sbjct: 409 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 443
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 201/413 (48%), Gaps = 6/413 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR F + ++ ++E G+ + + L VL+ + + FF+WA KQ GY HS
Sbjct: 82 ILRNFHSRVPKLELALQESGVTMRAGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYE 141
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y M+ I K+R+F WAL++EMR + L+T + ++LIRR+ + V +AI
Sbjct: 142 NYKAMVKIFSKMRQFGAVWALLEEMR--KDNSVLITSELFIVLIRRFASARLVEKAIEVL 199
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V+ A L + F + + F +L GWC
Sbjct: 200 DEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPSLRHFTSLLYGWCRE- 258
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M + G D+V F+ ++S YS A + L +M R G E + Y
Sbjct: 259 GKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSY 318
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I A + +A+ + ME G +VVTY +LI CK K++ Q D M Q
Sbjct: 319 TIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQ 378
Query: 307 RGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P TY L + EE L+ESMR +GC P Y ++I+ + +
Sbjct: 379 KGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKLGEVKQ 438
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++WNE+ + P+ ++ +IH G L EA +Y+ EM + LL P+
Sbjct: 439 GVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQ 491
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F +I ++ AR + K + + D+M + G E D V+ ++ AL K VK A SL + M
Sbjct: 179 FIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMR 238
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+ +P++ + SL+ C+ KL EA+ +M + G P I ++ L
Sbjct: 239 VR-FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ F LL+ M + GC+P ++Y ++I+ F + +V+ E+ G D +YTALI
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK+ +Q MK+K +P T
Sbjct: 358 SGFCKWGKINRGYQILDAMKQKGHMPNQLT 387
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 201/399 (50%), Gaps = 9/399 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++ G++VS E+V +VL+ RN + FF W+ KQ Y HS R YH MI K+R++
Sbjct: 91 LDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQY 150
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W LI+ MR + ++ +T I++R+Y V AI AF +++ + F
Sbjct: 151 KLMWDLINAMRKKK----MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALC+ KNV+ A+ + +D F ++K+++I+L GW + A V+ EM
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPK-AREVFREMID 265
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D+V++S ++ KA + + L + M + +Y+ ++H +++
Sbjct: 266 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 325
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ ME G+ +V +NSLI CKA ++ + EM +G++P ++ + L
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 321 DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+I GE E F + M K+ C+P DTY M+IK F ++ KVW + + G P
Sbjct: 386 HLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ LI+ L ++A EM E + P T
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 219/464 (47%), Gaps = 27/464 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+ + + + GIK S L+ + S + FT F WA KQ G+ S +++MI +L
Sbjct: 88 APLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFNSMIDVL 147
Query: 76 GKVRKFDTAWALI-DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K R FD+AW L+ D + GGE P LV+ T +LIRRY RA A + F+F
Sbjct: 148 AKSRAFDSAWLLVLDRIEGGEE-PELVSSNTFAVLIRRY------ARAGMTLSAIRTFEF 200
Query: 135 AVGIED----------FQGLLSALCRYKNVQDAEHLMFCNKDVFPF---NTKSFNIILNG 181
A ++ F+ LL +LC+ +V+ A + + P + + +N++LNG
Sbjct: 201 AFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNG 260
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
W R AE++W M + + VV++ ++ Y + R K + L +M+ GIE
Sbjct: 261 WFRSRKLKR-AEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEP 319
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ VYN +I +LA+ K+A+ +M+ P + TYNSL+K CKA L A +
Sbjct: 320 NVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVL 379
Query: 302 DEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
M+ RG PT+ TY+ F R G EE L M + G P TY +LIK
Sbjct: 380 KMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEE 439
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ +V E+ G D ++ T L+H L +LEEA + +M + ++P+ T
Sbjct: 440 ERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTF 499
Query: 419 ELLQDWSYNKQFVE--RQIASLKAHQPQSGQNTRVISKKSDQDR 460
E + + + E R++ + A P S + S D R
Sbjct: 500 ERMNNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSGDGDASR 543
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 8/444 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+L + + ++ + ++S+ LV +VL N +A FFLWA G+ HS
Sbjct: 53 LLSDHRYPHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLWAKSIPGFQHSVM 112
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+H ++ ILG ++F W + EMRG + + + ++ R Y + AI +F
Sbjct: 113 SFHILVEILGSCKQFAILWDFLIEMRG--SCHYEINSEIFWLIFRAYSQANLPDGAIRSF 170
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F I DF LL LC+ K+V+ A+ K+ F K+++I+++GW +I
Sbjct: 171 NRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDI- 229
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G S +A ++ M ++G D+++++ ++ K + + +F M +E D Y
Sbjct: 230 GDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTY 289
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ IH+ V+ A+ ++ M + PNV TYN +IK LCK ++EA DEM+
Sbjct: 290 SIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMIS 349
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG+ P +Y+A EV L+ M K C P TY M++K R +F
Sbjct: 350 RGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDK 409
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
V KVW + + P S+Y+ +IH GKLEEA +Y+ M ++ + P T E+L+
Sbjct: 410 VTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLR 469
Query: 423 DWSYNKQFVER-QIASLKAHQPQS 445
+ F++ +I + K Q S
Sbjct: 470 NQLLGLGFLDHIEILAAKMRQSTS 493
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 209/419 (49%), Gaps = 7/419 (1%)
Query: 6 DILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHST 65
+IL++ + + +CG+ ++ L+S++L+ NDW A F WA Q+GY H
Sbjct: 106 EILKKHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPP 165
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y M+ ILG+ +KF W L+ EM E SLVT + ++ RR + A+ A
Sbjct: 166 DLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVM---RRLARAGNFQDAVEA 222
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNI 185
F ++ IE L+ AL + +V+ A KD + +SFNI+L+G+C
Sbjct: 223 FRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKA 282
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+A ++ EM ++G +VVS++C I Y K ++ V +F +M+ + +
Sbjct: 283 -RKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVIT 341
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +HAL K + V A+ + + M+ P+ Y+SLI L ++ +L +A F++M
Sbjct: 342 YTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMK 401
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G+SP + TY+ + T E LL M + C+P TY L+K R ++
Sbjct: 402 KQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIK 461
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ + N + +N D +Y L+ L +GKLE A ++ EM K L+P +T ++L
Sbjct: 462 VLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKML 520
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 108/256 (42%), Gaps = 20/256 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ + Y I + K++ F A+ EM+ P+++T + H
Sbjct: 297 KQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFM---------H 347
Query: 118 DVGRA--IN-AFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
+G+A +N A Y+ K + D + L+ L + ++DA + + V P
Sbjct: 348 ALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSP 407
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++N ++ C + A ++ M + D+ +++ ++ + + + +
Sbjct: 408 -DLLTYNTMITSACTHL-EEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKF 465
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L + M + I D Y ++ L K ++ A S + M KG+ P TY L++ L
Sbjct: 466 LLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEEL- 524
Query: 290 KARKLDEARQAFDEML 305
+ L EA++ +++
Sbjct: 525 EQNNLTEAKEKIQKLM 540
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 9/403 (2%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++VS +V ++L +DW AAF FF+WAG Q GY HS Y++M+ ILGK ++FD
Sbjct: 120 CPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLM 179
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W LI +M E G LV+ T+ ++RR AI+AF +F L
Sbjct: 180 WGLISQM--DEIG-GLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVL 236
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L LC+ ++V+ A + P + SFN +++GWC EA + EM + G
Sbjct: 237 LDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCK-ARMMNEARDMMKEMEEHGF 295
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V++++ +I Y ++ V + ++M+ G + Y V+HAL K ++A+
Sbjct: 296 KPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALD 355
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
+ + G AP+ YNSLI L +A +L++A D+M G+ PT+ T++ +
Sbjct: 356 IFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAAC 415
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK-VWNEISENGNGPDR 380
E +L M + C+P TY L+K + RQ+ V + + + PD
Sbjct: 416 DHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCK-RQWIKVLRFLICHMFRKDITPDF 474
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
S+YT L+ L NGK ++ + EM K P+ +T +L+ +
Sbjct: 475 STYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAE 517
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK---ARNLHKVLRLFDQMKR 236
N +I+G ++ + +W +SQ +VS + + + A + F++M +
Sbjct: 164 NSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQ 223
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D N ++ L K R VK A + + V P+ ++N+L+ CKAR ++E
Sbjct: 224 FGVVKDTTAMNVLLDTLCKERSVKRARGAFQELR-GSVPPDESSFNTLVHGWCKARMMNE 282
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
AR EM + G P++ TY + ++ + + + V+ +L MR GC P TY +++
Sbjct: 283 ARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMH 342
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + +++++ +G PD S Y +LI+ L G+LE+A+ +M+ + P
Sbjct: 343 ALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRP 402
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQS 445
T L + + E + L + QS
Sbjct: 403 TVATFNTLISAACDHSQAENALKMLVKMEEQS 434
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 204/405 (50%), Gaps = 12/405 (2%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI +S L++ +L ++DW++A F WAG S + HS + Y M+ ILG+++ D
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
+++EMR SL+T T+ ++RR+ A+ F + E LL
Sbjct: 141 EILEEMRQ----ESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLL 196
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ K V+ A + K N +FNI+++GWCNI EA EM G
Sbjct: 197 DTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNI-RRVEEAHWTIQEMKGYGCR 255
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
V+S+S II CY + +N +V L D+M+ + Y ++ ALAK ++A+ +
Sbjct: 256 PCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQV 315
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII- 323
++ M G P+ + +NSLI L +A ++D+A F M + ++P TY++ + +
Sbjct: 316 VERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFC 375
Query: 324 --RTGEEVFGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFGN-VFKVWNE-ISENGNGP 378
E FG+L+ M K G C+P TY LIK + R+ + + N+ +++ G
Sbjct: 376 YYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGL 435
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D S+YT LIH L+ + + A + EM ++ ++P KT LL D
Sbjct: 436 DLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLD 480
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 199/399 (49%), Gaps = 9/399 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++ G++VS E+V +VL RN A+ FF W+ KQ Y HS R YH MI K+R++
Sbjct: 56 LDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQY 115
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W LI+ M + ++ +T I++R+Y V AI AF +++ + F
Sbjct: 116 KLMWDLINAMMKKK----MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 171
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
GLLSALC+ KNV+ A+ + +D F ++K+++I+L GW + A V+ EM
Sbjct: 172 NGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPK-AREVFREMVD 230
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D+V++S ++ KA + + L + M + +Y+ ++H +++
Sbjct: 231 AGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEE 290
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ ME G+ +V +NSLI CK ++ + EM +G++P ++ + L
Sbjct: 291 AVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILR 350
Query: 321 DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+I GE E F + M K+ C+P DTY M+IK F ++ KVW + + G P
Sbjct: 351 HLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFP 409
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ LI+ L ++A EM E + P T
Sbjct: 410 SMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGAT 448
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 213/408 (52%), Gaps = 7/408 (1%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
+VS+ LV+++L NDW A+ F WA Q Y HS Y++M+ ILGK + F W L
Sbjct: 193 RVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWEL 252
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+DEM SL +T+ +IRR AI+AF +++ + L+ A
Sbjct: 253 VDEMNHLAGSVSL---ETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 309
Query: 148 LCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
L + +V+DA ++ K PFN SFN++++G+C EA ++ E+ + G+ D
Sbjct: 310 LVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCK-AKKLDEAWKIMGEVEKSGLEPD 368
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+S++ I + + ++ V ++ QM+ G + + + ++HAL K + + +A+ + +
Sbjct: 369 VISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYE 428
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---R 324
M+++G P+ Y+SLI L KA +L + ++ ++M ++G++P + TY+ +
Sbjct: 429 KMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHS 488
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL M ++ C+P TY L+K F R ++ + + + + +N + +Y
Sbjct: 489 QEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYA 548
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
L+ L NGKL A ++ EM K ++P+ T ++L++ K +E
Sbjct: 549 ILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLE 596
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 213/408 (52%), Gaps = 7/408 (1%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
+VS+ LV+++L NDW A+ F WA Q Y HS Y++M+ ILGK + F W L
Sbjct: 170 RVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWEL 229
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+DEM SL +T+ +IRR AI+AF +++ + L+ A
Sbjct: 230 VDEMNHLAGSVSL---ETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 286
Query: 148 LCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
L + +V+DA ++ K PFN SFN++++G+C EA ++ E+ + G+ D
Sbjct: 287 LVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCK-AKKLDEAWKIMGEVEKSGLEPD 345
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+S++ I + + ++ V ++ QM+ G + + + ++HAL K + + +A+ + +
Sbjct: 346 VISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYE 405
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---R 324
M+++G P+ Y+SLI L KA +L + ++ ++M ++G++P + TY+ +
Sbjct: 406 KMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHS 465
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL M ++ C+P TY L+K F R ++ + + + + +N + +Y
Sbjct: 466 QEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYA 525
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
L+ L NGKL A ++ EM K ++P+ T ++L++ K +E
Sbjct: 526 ILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLE 573
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 8/444 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+L + + ++ + ++S+ LV +VL +N +A FFLWA G+ HS
Sbjct: 53 LLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVM 112
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+H ++ ILG ++F W + EMR E+ + + ++ R Y + AI +F
Sbjct: 113 SFHILVEILGSCKQFAILWDFLTEMR--ESHHYEINSEIFWLIFRAYSQANLPDGAIRSF 170
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F I D LL LC+ K+V+ A+ L K+ F K+++I+++GW I
Sbjct: 171 NRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEI- 229
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G S +A ++ M ++G D+++++ ++ K + + +F M +E D Y
Sbjct: 230 GDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTY 289
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ IH+ V+ A ++ M + PNV TYN +IK LCK ++EA Q DEM+
Sbjct: 290 SIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMIS 349
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG+ P +Y+A EV L+ M K C P TY M++K R +F
Sbjct: 350 RGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDK 409
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
V +VW + + P S+Y+ +IH GKLEEA +Y+ M ++ + P T E+L+
Sbjct: 410 VTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLR 469
Query: 423 DWSYNKQFVER-QIASLKAHQPQS 445
+ F++ +I + K Q S
Sbjct: 470 NRLLGLGFIDHIEILAAKMRQSTS 493
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 206/409 (50%), Gaps = 11/409 (2%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ--SGYAHSTREYHTM 71
K S + ++++ G++V+ E+ VL + N A+ FF WA KQ AH+ R YHT+
Sbjct: 53 KASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTV 112
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
+ L K+R++ W ++ MR + +T I++R+Y + A+ F ++
Sbjct: 113 VTSLAKIRQYQLMWDVVAIMRK----EGVANVETFGIIMRKYARAQKLDEAVYTFNVMEK 168
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
+ A + F LLSALC+ KNV+ A+ + + F + K+++I+L GW +
Sbjct: 169 YGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKM 228
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
E V+ +M G D+V++ ++ K + + + + M G + +Y+ ++H
Sbjct: 229 RE-VYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVH 287
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
++DA++ ME+ G+ P+VV YN+LI CK +K + A + D+M GISP
Sbjct: 288 TYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISP 347
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
RT++ L+ +I G +E + + SM K C+P +DTY M+IK F + KVW
Sbjct: 348 NSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVW 406
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ P +++ LI+ L G++ +A +M EK + P T
Sbjct: 407 KYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 455
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 147/340 (43%), Gaps = 47/340 (13%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA +TF + ++ G AH+ ++++++ L K + A + D+M P +T
Sbjct: 158 EAVYTFNVM--EKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKM-NNRFSPD---AKT 211
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
IL+ + + + + I + ++ ALC+ V++A ++
Sbjct: 212 YSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMS 271
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ P T ++I+++ + + +A +++M + GI DVV ++ +I+ + K +
Sbjct: 272 SRGCQP-TTFIYSILVHTY-GVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKK 329
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHAL------------------------------ 253
R+ D M+ GI + + +N +++ L
Sbjct: 330 FENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYTMM 389
Query: 254 ----AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ ++ A+ + K M K P++ T++ LI LC ++ +A ++M+++GI
Sbjct: 390 IKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 449
Query: 310 SPTIRTYHAFLD-IIRTG-EEVFG-LLESMRKMGCQPTND 346
P T+ +++ G ++V L+E M+ + +P D
Sbjct: 450 RPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILAQEPLFD 489
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 185/387 (47%), Gaps = 58/387 (14%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
+ E LS NDW++A FF W K+ + H+T ++ MI I + KF+ L DE
Sbjct: 52 IFETLSCYSNDWKSALDFFNWVEKECNFNHTTDTFNRMIDI---LEKFN----LKDE--- 101
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
F L+ ALC +K+
Sbjct: 102 ---------------------------------------------TSFCNLIDALCEHKH 116
Query: 154 VQDAEHLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
V +++ L F N + TK +N+IL GW + G + W EM Q+G+ D+ S+
Sbjct: 117 VIESQELCFGNNNGIDIVNKTKIYNMILRGWFKM-GWWSKCREFWEEMDQKGVHKDLHSY 175
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S + K K ++L+ +MKR G++ D YN V+ A+ V A+ + + M+E
Sbjct: 176 SIYMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKE 235
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG 331
G PNVVTYN++IK LC+ ++ EA + D+M ++GI + TYH F + +E+
Sbjct: 236 LGCMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHCFFRCLEKPKEILW 295
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L + M + G QP DTY+ML++KF RW V VW ++ E G PD +Y ALI AL
Sbjct: 296 LFDRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDALV 355
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTD 418
G L A +Y EM K L +P+ +
Sbjct: 356 QKGMLHMARRYEEEMLAKGLSAKPRAE 382
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 201/395 (50%), Gaps = 18/395 (4%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
KVS LV EVL + N A +FF WA KQ G+ ++T Y+ +I LGK+++F+ W L
Sbjct: 110 KVSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNL 169
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+++M+ ++TK+T ++ RRY V A+N F ++F + DF LL
Sbjct: 170 VNDMKRK----GVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDT 225
Query: 148 LCRYKNVQDAEHLMFCNKDV--FPFNTKSFNIILNGWCNIIGSSR---EAERVWMEMSQR 202
L + + V A+++ F + F + KS+ I+L GW G + + + V+ EM
Sbjct: 226 LIKSRQVLSAQNV-FDKMKIRRFVPDIKSYTILLEGW----GQEKNLLKLDEVYREMKDE 280
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G DVV++ +I+ Y K R + LF +M+ + ++ +I+ L R + +A
Sbjct: 281 GFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEA 340
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + + G AP TYN+++ C + ++D+A + DEM + G+ P RTY L
Sbjct: 341 LEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHH 400
Query: 323 IRTGE---EVFGLLESM-RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ E E F + E M + C+PT TY ++++ F + + KVW+ + G P
Sbjct: 401 LIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHP 460
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ LI++L KL+ A +Y+ EM + + P
Sbjct: 461 GMHMFSILINSLCHENKLDIACKYFQEMLDVGIRP 495
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F +NT+S+N +++ +G ++ +W +M ++G+ +F+ I Y+++ +
Sbjct: 143 FMYNTESYNALIDS----LGKIKQFNMIWNLVNDMKRKGVLTKE-TFALISRRYARSGKV 197
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + F++M++ G++ + +N ++ L K R V A ++ M+ + P++ +Y L
Sbjct: 198 KEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTIL 257
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGC 341
++ + + L + + + EM G P + TY ++ +R ++ L M C
Sbjct: 258 LEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNC 317
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
QP+ + LI R+ + + +G P+ +Y A++ A + ++++A++
Sbjct: 318 QPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYR 377
Query: 402 YYMEMKEKQLLPEPKTDELL 421
EM++ + P +T +++
Sbjct: 378 MVDEMRKSGVGPNSRTYDII 397
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 201/401 (50%), Gaps = 18/401 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ G VS +LV+EVL + N A FF WA +Q G+ ++ +H +I LGK+++F
Sbjct: 136 LDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQF 195
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W+L++ MR L++K T +++RRY V A+ F F + D+
Sbjct: 196 RLVWSLVEAMRCR----GLLSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDY 251
Query: 142 QGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREA---ERV 195
L+ L + K V+ A + M N P + K++ +++ GW G ++ + V
Sbjct: 252 NWLIDVLSKSKQVKKAHAIFKEMKRNGRFVP-DLKTYTVLMEGW----GHEKDLLMLKSV 306
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G+ DVV++ +IS + K+ + +++F +M+ G VY +I+ L
Sbjct: 307 YQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGS 366
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A+ + + G V T N+++ C++ K A + DEM + GI P RT
Sbjct: 367 EERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRT 426
Query: 316 YHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L +I++ EE + + + M K GC+P +TY M++ F + KVWN++
Sbjct: 427 YDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMK 486
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E G P ++ALI+ L +LEEA Y+ EM ++ + P
Sbjct: 487 EKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRP 527
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 136/295 (46%), Gaps = 5/295 (1%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+A ++ F + F L+ AL + K + L+ + + +F +I+ +
Sbjct: 168 WAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARA- 226
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKV 245
+EA + +M+ G+ D+ ++ +I SK++ + K +F +MKR G D K
Sbjct: 227 RKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKT 286
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ + + S+ + M + G+ P+VV Y LI CK+ K DEA + F EM
Sbjct: 287 YTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREME 346
Query: 306 QRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G P+ Y ++ + + E E E + G T ++ + R +F
Sbjct: 347 TNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQ 406
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ FK+ +E+ ++G GP+ +Y ++H L + K+EEA+ + M + P+ T
Sbjct: 407 HAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNT 461
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 215/429 (50%), Gaps = 25/429 (5%)
Query: 3 TLVDILREFSHKR-SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
T+ IL + S + + + + ++ GI SS L+ V + + + FLWA K+SG+
Sbjct: 91 TISSILSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGF 150
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALI-DEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
S ++ +I +L K R+FD+AW+LI +RGGE LV+ + +ILIRRY V
Sbjct: 151 RPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEES-FLVSVEVFVILIRRYARAGMVQ 209
Query: 121 RAINAFYAYKRFKFAVGIEDFQG---------LLSALCRYKNVQDAEHLMFCNKDV---F 168
AI + ++FA +E G LL +LC+ +V+ A +++ F
Sbjct: 210 PAI------RTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSF 263
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ +++NI++NGW + A+R+W EM + I VV++ +I Y + R++ +
Sbjct: 264 EPSIRAYNILINGWFRS-RKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAI 322
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D+M+R GIE + VYN ++ AL + K+A+ +M+ P + TYNSL+K
Sbjct: 323 ELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGY 382
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTN 345
CKA L A + M+ RG +PT TY+ F + G EE L M + G P
Sbjct: 383 CKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDK 442
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+K + +V NE+ G D ++ T L+H L K EEA +
Sbjct: 443 LTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEH 502
Query: 406 MKEKQLLPE 414
M + ++P+
Sbjct: 503 MIHRGIVPQ 511
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 207/432 (47%), Gaps = 36/432 (8%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
IL +F ++ + K++ LV +VL +N F+ AHS++
Sbjct: 56 ILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKN---LGFS-----------AHSSK 101
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+ F W + +MR ET + + ++ R YC + G AI AF
Sbjct: 102 Q-------------FPLIWDFLSDMR--ETRCCEICPEIFWLIFRAYCRANLPGDAIRAF 146
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNI 185
+ F G+ D LL LC+ K+V+ A+ N +V P N K+++I++ GW ++
Sbjct: 147 HQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDV 205
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G S EA +++ EM +RG DVV+++ ++ K N+ + +LF +M G+ D
Sbjct: 206 -GDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACS 264
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ I A + + A ++ M + PNV TYN ++K LCK+ K+DEA Q DEM+
Sbjct: 265 YSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMI 324
Query: 306 QRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+RG+SP + +Y+A EV L+ M K C P TY M++K R +F
Sbjct: 325 ERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFD 384
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V VW + E G P S+Y ++H GKLEEA +Y+ M + + P T ELL
Sbjct: 385 RVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELL 444
Query: 422 QDWSYNKQFVER 433
++ F E+
Sbjct: 445 RNRVIGLGFSEQ 456
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 17/431 (3%)
Query: 6 DILREFSHKRSEMRNKIEEC-------GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ 58
D++ E S S+ RN ++ +VSS LV +VL +N A FFLWA +
Sbjct: 36 DLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRI 95
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+AHS YH ++ ILG ++F W + E R E ++ + I+ R Y +
Sbjct: 96 PDFAHSLESYHILVEILGSSKQFALLWDFLIEAR--EYNYFEISSKVFWIVFRAYSRANL 153
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFN 176
A AF F ++D LL +LC K+V A+ K + P + K+++
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP-SAKTYS 212
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++ GW I +S A +V+ EM +R D+++++ ++ K+ ++ ++F +M
Sbjct: 213 ILVRGWARIRDAS-GARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+G++ D + IHA V A ++ M+ + PNV T+N +IK LCK K+D+
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
A DEM+Q+G +P TY++ + EV LL M + C P TY M++K
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLL 412
R +F ++W +SE P ++YT +IH L GKLEEA +Y+ M ++ +
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIP 451
Query: 413 PEPKTDELLQD 423
P T E+L++
Sbjct: 452 PYSTTVEMLRN 462
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 208/423 (49%), Gaps = 24/423 (5%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR+F + ++ + E G+++ L+ VL+ + + FF+WA KQ Y HS
Sbjct: 82 ILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIE 141
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y +M+ IL K+R+F W LI+EMR + P L+ + ++L++R+ + V +AI
Sbjct: 142 VYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASADMVKKAIEVL 199
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+F F F LL ALC++ +V+DA L F +
Sbjct: 200 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL---------FEDMRMRV--------- 241
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M++ G D+V ++ ++S Y+ A + L M+R G E + Y
Sbjct: 242 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 301
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I AL K +++A+ + ME +VVTY +L+ CK K+D+ D+M++
Sbjct: 302 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 361
Query: 307 RGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G+ P+ TY + + + EE L+E MR++ P Y ++I+ + +
Sbjct: 362 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 421
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++WNE+ ENG P ++ +I+ L G L EA ++ EM + + K E+ +D
Sbjct: 422 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLNTVLKDKKLEMAKD 481
Query: 424 -WS 425
WS
Sbjct: 482 VWS 484
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 203/411 (49%), Gaps = 18/411 (4%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
S + + ++ G+ +S ELV+EVL + N A FF WA +Q G+ ++ +H +
Sbjct: 108 SQPEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNL 167
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I LGK+++F W+L++ MR L++K T +++RRY V A+ F
Sbjct: 168 IEALGKIKQFRLVWSLVEAMRCR----GLLSKDTFRLIVRRYARARKVKEAVETFEKMSS 223
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGS 188
F + D+ L+ L + K V+ A + M N P + K++ +++ GW G
Sbjct: 224 FGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVP-DLKTYTVLMEGW----GH 278
Query: 189 SREA---ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
++ + V+ EM GI DVV++ +IS + K+ + +++F +M+ G V
Sbjct: 279 EKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHV 338
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I+ L + +A+ + + G V T N+++ C++ K A + DEM
Sbjct: 339 YCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMR 398
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ GI P RTY L +I++ EE + + + M GC+P +TY M++ F +
Sbjct: 399 KTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVD 458
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
KVW ++ E G P +++LI+ L +LEEA Y+ EM +K + P
Sbjct: 459 MALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 5/295 (1%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+A ++ F E F L+ AL + K + L+ + + +F +I+ +
Sbjct: 150 WAERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARA- 208
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKV 245
+EA + +MS G+ D+ ++ +I SK++ + K +F +MKR G D K
Sbjct: 209 RKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKT 268
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ + + S+ + M + G+ P+VV Y +LI CK+ K DEA + F EM
Sbjct: 269 YTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREME 328
Query: 306 QRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G P+ Y ++ + + E E E + G T ++ + R +F
Sbjct: 329 ANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQ 388
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ FK+ +E+ + G GP+ +Y ++ L + K+EEA+ + M + P+ T
Sbjct: 389 HAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNT 443
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 204/412 (49%), Gaps = 20/412 (4%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S ++ ++ G+ +S++L+ +VL VR + A FF + + G+ HS+
Sbjct: 53 STSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFFNFTADRRGFYHSSYSL 112
Query: 69 HTMIAILGKVRKFDTAW-ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
TM+ ILG+ RKFD W LID R +L+T +TL +++ R V V + +F+
Sbjct: 113 DTMLYILGRSRKFDHIWDVLIDIKRKDR---NLITPRTLQVVLGRVAKVCSVRMTVESFW 169
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+KR F LL LC+ K++ DA ++ K F N ++FNI+L+GW
Sbjct: 170 KFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGW----K 225
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
SS EAE + EM + G+ D+V+++ +I + K R L K + +M+ I D Y
Sbjct: 226 SSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYT 285
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I L A ++K M+E G P+V YN++I+ C A++LD A EM +
Sbjct: 286 SIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESK 345
Query: 308 GISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
G+SP +Y+ F + +R + +G M GC P + + LIK F R +
Sbjct: 346 GMSPNATSYNLFFRVFSWSNDLRNSWDFYG---RMMDAGCLPNTQSCMFLIKLFKRHEKV 402
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++WN++ E G G L+ L GKL EA + +++M EK P
Sbjct: 403 EMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKP 454
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+RG + S ++ ++R + + +KR DR + + GR+ K
Sbjct: 102 RRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRK----DRNLITPRTLQVVLGRVAK 157
Query: 261 DAISLMKSMEE----KGVAP--NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
S+ ++E K + P + +N+L++ LC+ + + +AR + L++G P ++
Sbjct: 158 -VCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHH-LKKGFRPNLQ 215
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
T++ L ++ EE E M+++G +P TY LI F + R+ + V + E
Sbjct: 216 TFNILLSGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREE 275
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +YT++I L L G+ ++A EMKE P+
Sbjct: 276 DILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPD 315
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 211/423 (49%), Gaps = 21/423 (4%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A+T+ IL + S + + ++VS ELV VL+ + N A +FF WA KQ G
Sbjct: 58 AETICRILS--TTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQG 115
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ H+T +H +I LGK+R+F W L+DEM+ + L+ T ++ RRY +
Sbjct: 116 FNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRK----LLNGDTFSLIARRYVRAKVIK 171
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYK-NVQDAEHLMFCNK--DVFPFNTKSFNI 177
A+ F +++ I DF L+ LC+ K +V+ A+ L + ++ P N KS+ I
Sbjct: 172 EALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEP-NLKSYTI 230
Query: 178 ILNGWC---NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ GW N++ + + V EM G DVV++ II+ Y KA+ + + ++ M
Sbjct: 231 LIEGWSQQQNLL----KVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDM 286
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ +Y I L G + +A + + G P TYN+++ C + ++
Sbjct: 287 LSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRI 346
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESM-RKMGCQPTNDTYIM 350
D+A + EM + GI P RTY L +I+ G +E + + + M + GC+P+ TY +
Sbjct: 347 DDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAI 406
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+++ F Q VWNE+ + G P ++ LI +L KL++A +Y+ +M +
Sbjct: 407 MVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVG 466
Query: 411 LLP 413
+ P
Sbjct: 467 IRP 469
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 12/261 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F NT+ F+ ++ +G R+ + +W EM QR + + +FS I Y +A+ +
Sbjct: 116 FNHNTEIFHALIEA----LGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVI 170
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL-VKDAISLMKSMEEKGVAPNVVTYNS 283
+ L+ F++M++ G++ +N +I L K + V+ A L M + + PN+ +Y
Sbjct: 171 KEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTI 230
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMG 340
LI+ + + L + + EM G P + TY ++ + +E G+ M
Sbjct: 231 LIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKN 290
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+ Y I + F+ + + +G P+ +Y A++ A + ++++A+
Sbjct: 291 VNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAY 350
Query: 401 QYYMEMKEKQLLPEPKTDELL 421
+ EMKE + P +T +++
Sbjct: 351 RIVGEMKELGIGPNARTYDII 371
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 129/259 (49%), Gaps = 15/259 (5%)
Query: 167 VFPFNT----KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+FPF+T K N C I+ ++ E+ +++S R +V S +++ +K
Sbjct: 42 IFPFHTSLLHKPNNPHAETICRILSTTPESP---VDVSLRNFPVEV-SPELVVAVLNKLS 97
Query: 223 NLHKVLRLFDQ--MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
N + F + K+ G + ++++A+I AL K R K +L+ M+++ + N T
Sbjct: 98 NAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDT 156
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG----EEVFGLLESM 336
++ + + +A+ + EA + F+ M + G+ P I ++ +D++ E+ L + M
Sbjct: 157 FSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKM 216
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
R+ +P +Y +LI+ +S+ + V +V E+ ++G PD +Y +I+A K
Sbjct: 217 RQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKY 276
Query: 397 EEAHQYYMEMKEKQLLPEP 415
+EA Y +M K + P P
Sbjct: 277 DEAIGIYHDMLSKNVNPSP 295
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 56/305 (18%)
Query: 60 GYAHSTREYHTMIAILGKVR-KFDTAWALIDEMRGGETGPSLVT---------KQTLLIL 109
G +++ +I +L K + + A L D+MR P+L + +Q L+
Sbjct: 184 GLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLK 243
Query: 110 IRRYC----------AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
+ C V G INA+ K++ A+GI + +LS KNV + H
Sbjct: 244 VDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGI--YHDMLS-----KNVNPSPH 296
Query: 160 LMFCN----------------------KDVFPFNTKSFNIILNGWCNIIGSSR--EAERV 195
+ +C FP ++N +++ +C S R +A R+
Sbjct: 297 I-YCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYC---WSMRIDDAYRI 352
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK-RMGIECDRKVYNAVIHALA 254
EM + GI + ++ I+ K + +F +M G E Y ++
Sbjct: 353 VGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFC 412
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+ A+ + M++KG+ P + +++LI LC KLD+A + F +ML GI PT
Sbjct: 413 NENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTAN 472
Query: 315 TYHAF 319
+ AF
Sbjct: 473 MFSAF 477
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 85/232 (36%), Gaps = 40/232 (17%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+ AF FF K SG+ Y+ +++ + D A+ ++ EM+ GP+ T
Sbjct: 312 DEAFEFF-EKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 370
Query: 106 LLI-LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
+L+ LI+ GR A+ ++R G E + + R MFCN
Sbjct: 371 ILVHLIKG-------GRTKEAYSVFQRMSSETGCEPSVSTYAIMVR----------MFCN 413
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
++ A VW EM +GI + FS +I L
Sbjct: 414 ENQLDM---------------------AMVVWNEMKDKGILPGIHMFSTLIISLCHENKL 452
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
R F QM +GI +++A AL + I K +++ P
Sbjct: 453 DDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIHFAKKVDKLRNTP 504
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 7/403 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ G +VS+ LV +VL NDW AA+ FF+WA KQ+ Y HS Y+ M+ ILGK ++F
Sbjct: 168 LDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEF 227
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D W L+ EM+ E V T+ ++RR+ A+ AF ++
Sbjct: 228 DLMWKLVKEMKRIE---GYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAAL 284
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL AL + ++++ A +++ K P ++ SFNI++NGWC + + A +V E +
Sbjct: 285 NKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEK-ARKVMEERKE 343
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G DV +++ I Y ++ KV + ++M+ G + Y ++ K +
Sbjct: 344 HGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSK 403
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ + M++ G+ P+ Y+SL+ L KA +L +A + FD+M ++G+ + TY+ +
Sbjct: 404 ALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMIS 463
Query: 322 II---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E LL+ M + C+P TY L+K + ++ + + + + ++ P
Sbjct: 464 TACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCP 523
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
DR +YT L+ +L +GKL EA ++ EM K P T +LL
Sbjct: 524 DRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLL 566
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 203/417 (48%), Gaps = 6/417 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR++ + ++ + E G+ V L VLS + A+ F+ WA KQSG+
Sbjct: 98 ILRKYHSRVPKLELALRESGVVVRPGLTERVLSRCGDAGNLAYRFYSWASKQSGHRLDHD 157
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI +L ++R+F WALI+EMR + P L+T Q +IL+RR+ + V +A+
Sbjct: 158 AYKAMIKVLSRMRQFGAVWALIEEMR--QENPHLITPQVFVILMRRFASARMVHKAVEVL 215
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A L + + + K F +L GWC
Sbjct: 216 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKE- 274
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M GI D+V ++ ++ Y++A + L +M+R E + Y
Sbjct: 275 GKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSY 334
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I +L K +++A L M+ G +VVTY++LI CK K+ + DEM+Q
Sbjct: 335 TVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQ 394
Query: 307 RGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P Y + + EE L+ M+K+GC P Y +I+ + +
Sbjct: 395 QGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKE 454
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++WNE+ +G P ++ +I+ G L EA +Y+ EM + L P+ L
Sbjct: 455 GIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTL 511
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQ-PTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
Y A + ++ R V+ L+E MR+ T +++L+++F+ R +V +E
Sbjct: 158 AYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDE 217
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQF 430
+ + G PD + L+ AL NG ++EA + +M+ + LL W +
Sbjct: 218 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKL 277
Query: 431 VE 432
+E
Sbjct: 278 ME 279
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 215/455 (47%), Gaps = 38/455 (8%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A L IL + M + ++ GI ++ L+ + L +R++ + A + F +
Sbjct: 57 ADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNSKIALSLFHHSLSLPP 116
Query: 61 YAHSTRE-------------------YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ Y+ MI IL KVR+FD W LI EM P
Sbjct: 117 TSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKP--- 173
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRF-KFAVGIEDFQGLLSALCRYKNVQDAEHL 160
T +T +LIRR A +AI AF + F V F LL LC+Y V+ +
Sbjct: 174 TSETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEPVNETHFCFLLDTLCKYGYVKVGVEI 233
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
K F N K + +++ GWC I G AER E +RGI VV+++ +++ +
Sbjct: 234 FNKRKHRFSPNVKMYTVLIYGWCKI-GRIDMAERFLKETGERGIEATVVTYNVLLNGICR 292
Query: 221 ARNLHKVLR----------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+LH R LFD+M+ GIE D ++ V+H ++ + + +K M+
Sbjct: 293 RASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMK 352
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGE 327
EKG+ P+VVTY S++K LC ++++A + EM++ G+S T TY+ F + E
Sbjct: 353 EKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAE 412
Query: 328 EVFGLLESMRKMGCQPTN-DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
L + MR+ G +Y +L++ F + V ++W ++ +G GPD SYT L
Sbjct: 413 SALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTML 472
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
IH L K EA ++++EM EK LLP+ T E L
Sbjct: 473 IHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETL 507
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 96/242 (39%), Gaps = 20/242 (8%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R A L DEMR P + + I++ Y H ++ K +
Sbjct: 304 RTITLAENLFDEMRERGIEPDVTS---FSIVLHVYSRAHKPELTLDKLKLMKEKGICPSV 360
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RV 195
+ ++ LC ++DAE L+ ++ + N + ++AE ++
Sbjct: 361 VTYTSVVKCLCSCGRIEDAEELL---GEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKL 417
Query: 196 WMEMSQRGI-CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ +M + G+ + S++ ++ + L V +++ +K G+ D Y +IH L
Sbjct: 418 YKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLC 477
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAFDEM 304
+ ++A M EKG+ P VT+ +L K L ++ +KLDE F
Sbjct: 478 EKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEESITFGSE 537
Query: 305 LQ 306
Q
Sbjct: 538 FQ 539
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 203/410 (49%), Gaps = 16/410 (3%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
+ ++ + ++ G+ VS ELV+EVL + N A FF WA +Q G++++ +H +
Sbjct: 108 TQPEPKIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNL 167
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I LGK+++F W+L++ MR L++K T +++RRY V A+ F
Sbjct: 168 IEALGKIKQFRLVWSLVETMRCR----GLLSKDTFKLIVRRYARARKVKEAVETFEKMSI 223
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
F + D+ L+ L + K V+ A+ + K F + K++ +++ GW G
Sbjct: 224 FGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGW----GHE 279
Query: 190 RE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
++ + ++ EM GI DVV++ +IS + K+ + +++F +M+ G VY
Sbjct: 280 KDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVY 339
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I+ L + +A+ + ++ G V T N+++ C+A K A + DEM +
Sbjct: 340 CMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRK 399
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ P RTY L + + EE + + + M GC+P +TY M++ F +
Sbjct: 400 CKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDM 459
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
KVW ++ E G P ++ALI+ L +LEEA Y+ EM +K + P
Sbjct: 460 ALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 33/220 (15%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E Q G Y F +I K + V L + M+ G+ + + ++ A+
Sbjct: 150 WAE-RQEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCRGL-LSKDTFKLIVRRYAR 207
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R VK+A+ + M G+ + YN LI L K++++ +A+ + EM ++G
Sbjct: 208 ARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKG------- 260
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F+ P TY +L++ + + V ++ E+ + G
Sbjct: 261 --KFV----------------------PDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAG 296
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
PD +Y LI A +GK +EA + + EM+ +P P
Sbjct: 297 IRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSP 336
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 202/398 (50%), Gaps = 12/398 (3%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ + GI +S++L+ +VL VR + A FF + + G+ H+ T++ I
Sbjct: 55 LKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTDNRKGFYHTPYSLDTILYI 114
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ RKFD W ++ +M+ + L++ +T+ I++ R + V + + +F +K+F
Sbjct: 115 LGRSRKFDHIWDVLIKMKRKDRF--LISPRTMQIVLARVAKLCSVRQTVESFRKFKKFVS 172
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ F LL LC+ K++ DA ++ K F N ++FNI+L+GW S EAE
Sbjct: 173 VLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNILLSGW----KQSEEAEL 228
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ EM + GI DVVS++ +I Y K R + K ++ ++M+ I D Y ++I L
Sbjct: 229 FFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLG 288
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
A ++ M+E G P+V YN++I+ C A++L +A DEM +G+SP
Sbjct: 289 LVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNAT 348
Query: 315 TYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ F + ++ + L M + GC P + + LI+ F + + +WN++
Sbjct: 349 TYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDM 408
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
E G G L L GKL EA + +++M EK
Sbjct: 409 VEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEK 446
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 185 IIGSSREAERVW---MEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
I+G SR+ + +W ++M ++ + +++ +K ++ + + F + K+
Sbjct: 114 ILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSVRQTVESFRKFKKFVSV 173
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +NA++ L + + + DA ++ ++ K PN+ T+N L L ++ +EA
Sbjct: 174 LDTTCFNALLRTLCQEKSMTDARNVYHRLK-KEFKPNLQTFNIL---LSGWKQSEEAELF 229
Query: 301 FDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F+EM + GI P + +Y++ +D+ R E+ + ++E MR+ P TY +I
Sbjct: 230 FEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGL 289
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
Q + NE+ E G PD ++Y A+I + +L +A EM K L P T
Sbjct: 290 VGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATT 349
Query: 418 -----------DELLQDWSYNKQFVE 432
++L WS ++ +E
Sbjct: 350 YNLFFRVFYWSNDLRNSWSLYRRMME 375
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNAVIHALAKGRL 258
+++G + S I+ ++R + + +MKR + V+ +AK
Sbjct: 97 NRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCS 156
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+ + + ++ + +N+L++ LC+ + + +AR + L++ P ++T++
Sbjct: 157 VRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHR-LKKEFKPNLQTFNI 215
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L + EE E MR++G +P +Y LI + + R+ +KV ++ E P
Sbjct: 216 LLSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISP 275
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
D +YT++I L L G+ ++A EMKE P+
Sbjct: 276 DVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPD 311
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 206/407 (50%), Gaps = 20/407 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
+++ ++ G+ +S++++ +VL VR + FF + G++ G+ HS+ TM+
Sbjct: 49 QLKQSLKSSGVFLSNDVIDQVLKRVRFSHGNPSQTLEFFRYTGRRKGFYHSSFSLDTMLY 108
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
ILG+ R F W L+ E R + + +T +T+++++ R V V + + +F +++
Sbjct: 109 ILGRSRMFGQVWELLIEARRKDQ--TAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLV 166
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F LL LC+ K++ DA ++ K F N ++FNI+L+GW + +A+
Sbjct: 167 QEFDTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGW----KTPEDAD 222
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+ EM + G+ DVV+++ ++ Y K R + K ++ D+M+ D Y +I L
Sbjct: 223 LFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGL 282
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
A +++K M+E G P+ YN+ I+ C A++L +A +EM+ +G+SP
Sbjct: 283 GLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNA 342
Query: 314 RTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY+ F + ++ + + + M GC P + + LI+ F R + + W +
Sbjct: 343 TTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGD 402
Query: 371 ISENGNGPDRSSYTALIHALF----LNGKLEEAHQYYMEMKEKQLLP 413
+ E G G SYT + LF GKLEEA + ++EM EK P
Sbjct: 403 MVEKGFG----SYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKP 445
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 179 LNGWCNIIGSSREAERVWMEM------SQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
L+ I+G SR +VW + Q I V ++ +K ++ + + F
Sbjct: 103 LDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVM--VVLGRIAKVCSVRQTVESFR 160
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ +++ E D +NA++ L + + + DA ++ S++ + PN+ T+N L L +
Sbjct: 161 KFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHR-FRPNLQTFNIL---LSGWK 216
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYI 349
++A F EM + G++P + TY++ +D+ G E+ + +L+ MR P TY
Sbjct: 217 TPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYT 276
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I Q V E+ E G PD ++Y A I + +L +AH EM K
Sbjct: 277 CIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTK 336
Query: 410 QLLPEPKTDELL 421
L P T L
Sbjct: 337 GLSPNATTYNLF 348
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 210/423 (49%), Gaps = 10/423 (2%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+L + + + ++ + + +VSS LV +VL +N A FFLWA + + HS
Sbjct: 44 VLSDHRNPKDDLEHTLAAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLE 103
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
YH ++ ILG ++F W + E R E +T + I+ R Y + A AF
Sbjct: 104 SYHILVEILGCSKQFALLWDFLIEAR--EYNYFEITSKVFWIVFRAYSRANLPSEASRAF 161
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCN 184
F ++D LL +LC K+V A+ K + P + K+++I++ GW
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVP-SAKTYSILVRGWAR 220
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I +S A +V+ EM + D+++++ ++ K+ ++ ++F +M +G++ D
Sbjct: 221 IRDAS-GARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAY 279
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ IH+ V A ++ M+ + PNV T+N +IK LCK K+D+A DEM
Sbjct: 280 SFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+Q+G +P TY++ + EV LL M + C P TY M++K R +F
Sbjct: 340 IQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
V ++W +SE P ++YT +IH L GKLEEA +Y+ M ++ + P T E+
Sbjct: 400 DRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEM 459
Query: 421 LQD 423
L++
Sbjct: 460 LRN 462
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 203/409 (49%), Gaps = 11/409 (2%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ--SGYAHSTREYHTM 71
K S + ++++ G++V+ ++ VL + N A+ FF WA +Q G AH+ R YHT+
Sbjct: 48 KASAVEHELDHSGVRVTPDVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTV 107
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
+A L K+R++ W ++ MR V +T I++R+Y V A+ F ++
Sbjct: 108 VASLAKIRQYQLMWDVVAVMRR----EGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEK 163
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
+ + F LL ALC+ KNV+ A+ + F + K+++I+L GW +
Sbjct: 164 YGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKM 223
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
E V+ EM G D+V++ ++ K + + +R+ M G + +Y+ ++H
Sbjct: 224 RE-VYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVH 282
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
++DA++ ME+ G+ P++V YN+L+ CKA+K + A + ++M GI+
Sbjct: 283 TYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITT 342
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
RT++ L+ +I G +E + + M K CQP DTY M+IK F + KVW
Sbjct: 343 NSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVW 401
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ P +++ LI+ L ++ +A +M EK + P T
Sbjct: 402 KYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGST 450
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 202/418 (48%), Gaps = 6/418 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
I+ + H R ++ + ++S++LV +VL + +A FFLWA G+ HS +
Sbjct: 49 IVSDHRHPRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQ 108
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+H ++ ILG+ ++F W + E R ++ +T + I+ Y AI +F
Sbjct: 109 SFHILVEILGRSKQFAILWDFLIETRESDSSCK-ITNEIFWIIFTAYSRADLPDGAIRSF 167
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F I D LL LC+ K+V+ A+ K F TK+++I++NGW I
Sbjct: 168 VRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKI- 226
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G S +A ++ M ++G D+++++ ++ K ++ + + + M +E D Y
Sbjct: 227 GDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTY 286
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ I + V A ++ M + PNV TYN +IK LCK +K++EA Q DEM+
Sbjct: 287 SIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMIS 346
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G+ P +Y+A EV L+ M K C P TY M++K R +F
Sbjct: 347 SGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDK 406
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+VW + + P S+Y+ +IH L GKLEEA +Y+ M ++ + P T E+
Sbjct: 407 ATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEM 464
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A R ++ M + GI ++ ++ K +++ + + FDQ+K + K Y+ +I+
Sbjct: 163 AIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFL-LTTKTYSILIN 221
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
K A L +M E+G +++ YN+L++ LCK +DEA ++ML + + P
Sbjct: 222 GWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEP 281
Query: 312 TIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY F+ V FG+L+ MR+ P TY +IK+ + +
Sbjct: 282 DAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIK--------- 332
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
K+EEA+Q EM L P+ WSYN
Sbjct: 333 --------------------------KVEEAYQLLDEMISSGLKPDT--------WSYN 357
>gi|359474664|ref|XP_003631508.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80550, mitochondrial-like [Vitis vinifera]
Length = 384
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 177/337 (52%), Gaps = 13/337 (3%)
Query: 30 SSELVS---EVLSWVRNDWEAAFTFFLWAGKQSGYAHST-REYHTMIAILGKVRKFDTAW 85
SS ++S + LS NDW+ A FF W QSG+ H T Y+ MI IL K +F W
Sbjct: 24 SSPIISPLRQTLSCYANDWKRALEFFNWVQTQSGFNHPTDTSYNRMIDILSKFFEFYLVW 83
Query: 86 ALIDEMRGGETGPSLVTKQ-TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
LI M+ PS V T I+ + Y + H V A+NA+ + F F + L
Sbjct: 84 VLIQRMKAR---PSCVPNHATFCIVFKHYASAHLVEEAMNAYDRTEEFNFKDETR-YSNL 139
Query: 145 LSALCRYKNVQDAEHLMFC-NKD-VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ ALC YK+V +AE L +KD VF + K +++IL GW + G ++ W EM R
Sbjct: 140 IDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGWFKM-GXWKKCREFWEEMDWR 198
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
C + S+S + K + ++L+ +MK GI D YNAVI A+ V +
Sbjct: 199 SGCKSLCSYSIYMDIQCKGGRPWRAVKLYKEMKTXGIRLDVVAYNAVIRAIGLSEGVDFS 258
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
I + + M+E G PNVVTY+++IK LC+ ++ EA D+M ++ +P + TYH F
Sbjct: 259 IRVYREMKELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQMREKDCAPNVMTYHCFFGC 318
Query: 323 IRTGEEVFGLLESM-RKMGCQPTNDTYIMLIKKFSRW 358
+ +++F + + M +G DTY+ML+KKF RW
Sbjct: 319 LEKPKQIFRMFDRMINSVGGLGRMDTYVMLMKKFGRW 355
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Query: 184 NIIGSSREAERVWM---EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+I+ E VW+ M R C + +F + Y+ A + + + +D+ +
Sbjct: 71 DILSKFFEFYLVWVLIQRMKARPSCVPNHATFCIVFKHYASAHLVEEAMNAYDRTEEFNF 130
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISL-MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ D Y+ +I AL + + V +A L ++ ++ +V Y+ +++ K + R
Sbjct: 131 K-DETRYSNLIDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGWFKMGXWKKCR 189
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKF 355
+ ++EM R ++ +Y ++DI G + L + M+ G + Y +I+
Sbjct: 190 EFWEEMDWRSGCKSLCSYSIYMDIQCKGGRPWRAVKLYKEMKTXGIRLDVVAYNAVIRAI 249
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+V+ E+ E G P+ +Y +I L +G++ EA+ +M+EK P
Sbjct: 250 GLSEGVDFSIRVYREMKELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQMREKDCAPNV 309
Query: 416 KT 417
T
Sbjct: 310 MT 311
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 202/410 (49%), Gaps = 16/410 (3%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
+ + + ++ G+ +S ELV+EVL + N A FF WA +Q G++++ +H +
Sbjct: 112 TQPEPRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNL 171
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I LGK+++F W+L++ MR L++K T +++RRY V A+ F
Sbjct: 172 IEALGKIKQFKLVWSLVETMRCR----GLLSKDTFKLIVRRYARARKVKEAVETFEKMSI 227
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
F + D+ L+ L + K V+ A+ + K F + K++ +++ GW G
Sbjct: 228 FGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGW----GHE 283
Query: 190 RE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
++ + ++ EM GI DVV++ +IS + K+ + +++F +M+ G VY
Sbjct: 284 KDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVY 343
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I+ L + +A+ + ++ G V T N+++ C+A K + A + DEM +
Sbjct: 344 CMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRE 403
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
I P RTY L + + EE + + + M GC+P +TY M++ F +
Sbjct: 404 CKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDM 463
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
VW ++ E G P ++ALI+ L +LEEA Y+ EM +K + P
Sbjct: 464 ALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 513
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 173 KSFNIILNGWCNII---GSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ F+ G+ N+I G ++ + VW M RG+ +F I+ Y++AR + +
Sbjct: 159 EGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGL-LSKDTFKLIVRRYARARKVKE 217
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLI 285
+ F++M G++ + YN +I L+K + VK A ++ K M+ KG P++ TY L+
Sbjct: 218 AVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLM 277
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
+ + L + + EM+ GI P + Y + ++G +E + M GC
Sbjct: 278 EGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCM 337
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P+ Y MLI + K + + ++G + + A++ A K E A +
Sbjct: 338 PSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKM 397
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVER-----QIASLKAHQPQSGQNTRVIS 453
EM+E ++ P +T +++ + Q E Q + +PQ T ++
Sbjct: 398 VDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVG 453
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 33/220 (15%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W E Q G Y F +I K + V L + M+ G+ + + ++ A+
Sbjct: 154 WAE-RQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGL-LSKDTFKLIVRRYAR 211
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R VK+A+ + M G+ + YN LI L K++++ +A+ + EM ++G
Sbjct: 212 ARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKG------- 264
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F+ P TY +L++ + + V ++ E+ + G
Sbjct: 265 --KFV----------------------PDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAG 300
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
PD +Y LI A +GK +EA + + EM+ +P P
Sbjct: 301 IRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSP 340
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 223/423 (52%), Gaps = 31/423 (7%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M + ++ GI ++ L+ + L +R++ + A +FF + + + ++ +I ILG+
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF------YAYKR 131
VR+FD LI EM +T P +T LIL++R A +A+ AF +R
Sbjct: 118 VRQFDVVRQLIVEM--DQTSP-----ETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRR 170
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
F+ +F LL LC+Y + A + K+ F + K + I++ GWC +
Sbjct: 171 FRLV----EFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKL-RRIDM 225
Query: 192 AERVWMEMSQRGICYDVVSFSCIIS--CYSKA--------RNLHKVLRLFDQMKRMGIEC 241
AE+ +EM + GI +VV+++ +++ C + + RN+ ++FD+M++ GIE
Sbjct: 226 AEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEP 285
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D ++ V+H ++ + + MK M+ KG++P + TY S++K LC +L+EA +
Sbjct: 286 DVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELL 345
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKKFSRW 358
+ M++ GISP+ TY+ F + ++ G + RKM C+P+ TY +L+ F
Sbjct: 346 ETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINL 405
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ V ++W+++ + GPD SYT+L+H L K +EA Y++EM E+ LP+ T
Sbjct: 406 GKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTF 465
Query: 419 ELL 421
E L
Sbjct: 466 ETL 468
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 112/306 (36%), Gaps = 58/306 (18%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ + + Y +IA K+R+ D A + EM P++VT LL I R ++
Sbjct: 199 RKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASL 258
Query: 117 H-------DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ---DAEHLMFCNKD 166
H +V A F ++ + F +L R + D LM K
Sbjct: 259 HPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKA-KG 317
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI------------ 214
+ P +++ ++ C+ G EAE + M + GI +++C
Sbjct: 318 ISP-TIETYTSVVKCLCSC-GRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANG 375
Query: 215 -ISCYSKARN----------------------LHKVLRLFDQMKRMGIECDRKVYNAVIH 251
++ Y K +N + V ++D +K D Y +++H
Sbjct: 376 AMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVH 435
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAF 301
L K+A M E+G P +T+ +L K L ++ +KLDE F
Sbjct: 436 GLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITF 495
Query: 302 DEMLQR 307
QR
Sbjct: 496 GSEFQR 501
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 203/409 (49%), Gaps = 6/409 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+LR+F + ++ ++E G+ + + L VL+ + A+ FF+WA KQ Y H
Sbjct: 57 LLRKFHSRVPKLELALQESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYE 116
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI +L K+++F WAL++EMR L+T + ++++RR+ + V +AI
Sbjct: 117 NYKAMIKVLSKMKQFGAVWALLEEMR--RDNSVLITSEVFVVVMRRFASSRMVNKAIEVL 174
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ F LL ALC+ +V++A L + F + K F +L GWC
Sbjct: 175 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKE- 233
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M + G D+V ++ ++S Y+ A + L +++R G + + Y
Sbjct: 234 GKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSY 293
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I AL + +A+ + ME G +VVTY +L+ CK R +D+ Q M+Q
Sbjct: 294 TILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQ 353
Query: 307 RGISPTIRTY-HAFL--DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P TY H L + EE L+ M+K+GC P Y ++I+ + +
Sbjct: 354 KGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNA 413
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
WNE+ +G P ++ +I+ +G L EA QY+ EM E+ LL
Sbjct: 414 GVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLL 462
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F ++ ++ +R ++K + + D+M + G E D V+ ++ AL K VK+A SL + M
Sbjct: 154 FVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 213
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE--- 327
+ +P++ + L+ CK KL EA+ +M + G P I Y+ L T
Sbjct: 214 VR-FSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMG 272
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ F LL+ +R+ GC P +Y +LI+ + +V+ E+ +G D +YTAL+
Sbjct: 273 DAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALV 332
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ +Q M +K +P T
Sbjct: 333 SGFCKWRMIDKGYQILQSMIQKGHMPNQLT 362
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 189/373 (50%), Gaps = 27/373 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ LG+ R+FD AW L+ E T +T +L RRY A +A+ AF
Sbjct: 106 YDAVVDALGRARQFDAAWRLVVEAAADGAA----TPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 128 AYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+ F VG E +F LL LC+YK + A + K + N K + +++ GWC
Sbjct: 162 DMEAF---VGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWC 218
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR----------LFDQ 233
+ + A++ +M GI ++V+++ +++ + +LH R L +
Sbjct: 219 KV-NRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKE 277
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + GIE D Y+ ++H ++ + + + +SM+E+G+ P V TY S+IK L +
Sbjct: 278 MHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGR 337
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTND--TY 348
LD+A DEM G+ P+ TY+ F R ++V G L+ KM G T D TY
Sbjct: 338 LDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+L+ F + Q V +VWN++ E+ GPD +SYT L+H L N K EA Q++MEM E
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 409 KQLLPEPKTDELL 421
+ LP+ T E L
Sbjct: 458 RGFLPQKITFETL 470
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 202/408 (49%), Gaps = 12/408 (2%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ---SGYAHSTREYHTMI 72
S + +++ ++V+ ++ VL + N A+ FF WA KQ G AH+ R +HT++
Sbjct: 50 SGLEIELDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWARKQRRGGGCAHTVRSFHTVV 109
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
A L K+R++ W ++ MR +V +T I++R+Y V A+ F +++
Sbjct: 110 ASLAKIRQYQLMWDVVAIMRR----QGVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKY 165
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ F LL ALC+ KNV+ A+ + F + K+++I+L GW +
Sbjct: 166 GVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPK-M 224
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+V+ +M G D+V++ ++ K + + + + M G + +Y+ ++H
Sbjct: 225 RKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHT 284
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
++DA++ M++ G+ P+VV YN+L+ CK +K D A + D+M GI+P
Sbjct: 285 YGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPN 344
Query: 313 IRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
RT++ L+ +I G +E + + M K CQP +DTY M+IK F + KVW
Sbjct: 345 SRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLEMALKVWK 403
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ P +++ LI+ L G++ +A +M EK + P T
Sbjct: 404 YMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 451
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 10/240 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ L K + + A ++ +M P+ +L+ Y + A+ F
Sbjct: 243 YGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYS---VLVHTYGVEMRIEDAVATFL 299
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
++ + + L++A C+ K +A +M + P N++++NIILN ++
Sbjct: 300 DMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITP-NSRTWNIILNKLISL 358
Query: 186 IGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EA RV+ M +R C D +++ +I + + L L+++ M+
Sbjct: 359 -GKDDEAYRVFRRMIKR--CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMH 415
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
++ +I+ L V A L++ M EKG+ P T+ L + L K + D D+M
Sbjct: 416 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKM 475
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 128/314 (40%), Gaps = 58/314 (18%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA +TF + ++ G + +++++ L K + A + ++M G P T
Sbjct: 154 EAVYTFNVM--EKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQM-NGRFSPDAKTYSI 210
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVG------IEDFQGLLSALCRYKNVQDAEH 159
LL GRA N K + + I + ++ +LC+ V++A
Sbjct: 211 LL---------EGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEA-- 259
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIIS 216
+F +D+ + I + + G +A +++M + GI DVV ++ +++
Sbjct: 260 -VFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVT 318
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-----------GRLVK----- 260
+ K + R+ D M+ GI + + +N +++ L R++K
Sbjct: 319 AFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPD 378
Query: 261 -DAISLM-----------------KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
D ++M K M K P++ T++ LI LC ++ +A +
Sbjct: 379 SDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLE 438
Query: 303 EMLQRGISPTIRTY 316
+M+++GI P T+
Sbjct: 439 DMIEKGIRPPGSTF 452
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 205/416 (49%), Gaps = 26/416 (6%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS---TREYHTMIAILGKVRKFD 82
G+ +S +L+ ++L +R + A + A + ++ + Y ++ LG+ R+FD
Sbjct: 76 GVSLSGDLLVQILLRLRGASKLALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFD 135
Query: 83 TAW-ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF-KFAVGIED 140
AW ++D G P +T +L RRY A +AI AF + F +
Sbjct: 136 AAWRVVVDASADGAASP-----RTFAVLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAE 190
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
F LL LC+YK + A + K + N K ++I++ GWC + S A++ +M
Sbjct: 191 FATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKV-NRSDMAKKFLKDML 249
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLR----------LFDQMKRMGIECDRKVYNAVI 250
GI ++V+++ +++ + +LH R L +M+ GIE D Y+ ++
Sbjct: 250 VHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIIL 309
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H ++ + + + +SM+E+G+ P V TY S+IK L +L++ DEM+ G+
Sbjct: 310 HVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVC 369
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ-----PTNDTYIMLIKKFSRWRQFGNVF 365
P+ TY+ FL R ++V LE KM P TY +L+ FS+ + G V
Sbjct: 370 PSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVM 429
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+W+++ E+ GPD SYT LIH + K EA Q++MEM EK LP+ T E L
Sbjct: 430 DIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETL 485
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 193/402 (48%), Gaps = 7/402 (1%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
+S ++ + GI +S ++V++VL+ EA TFF WA ++ G Y ++
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ + F ++ M P L + L I + + VH V RAI F + F
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
E F LL LC +V A+ + K PF++ S+NI+++GW + G E E+
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKL-GEVEEMEK 276
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V EM + G D +S+S +I + ++ + +FD +K G D VYNA+I
Sbjct: 277 VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFI 336
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
R +++ + M ++ PN+ TY+ L+ L K RK+ +A + F+EML RG+ PT
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG 396
Query: 315 TYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+FL + + + + RK GC+ + Y +L+K+ SR+ + G + VW+E+
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E+G D Y ++ L + G LE A E K P
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G+ DV S+S I+ + + ++ + M G+ D + + + + V+
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
AI L + E GV + ++N+L++ LC+ + A+ F+ ++G P +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSY--- 258
Query: 321 DIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+I+ +G G +E M K+ G P +Y LI+ R + + ++++ I
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GN PD + Y A+I +E+ +YY M +++ P +T
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 138/325 (42%), Gaps = 26/325 (8%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
E+ + E G+K S+E + +L + R+ AA + F K+ + Y+ MI+
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF--NAKKGNIPFDSCSYNIMISG 264
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K+ + + ++ EM GP ++ L+ + R GR ++ + K
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR------TGRINDSVEIFDNIKH 318
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM-----FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ D + +C + + +D + M +++ P N ++++ +++G I G
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP-NLETYSKLVSGL--IKGRK 375
Query: 190 -REAERVWMEMSQRGICYD---VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+A ++ EM RG+ V SF + Y H + ++ + ++ G
Sbjct: 376 VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPP---HAAMVIYQKSRKAGCRISESA 432
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ L++ +++ M+E G +V Y ++ LC L+ A +E +
Sbjct: 433 YKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAM 492
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVF 330
++G P R ++ L IIR ++ F
Sbjct: 493 RKGFCPN-RFVYSRLSIIRKWQQKF 516
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 203/419 (48%), Gaps = 31/419 (7%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFF----LWAGKQSGYAHSTREYHTMIAILGKVRKF 81
G+ +S L+ ++L +R + A + L + Y ++ LG+ +F
Sbjct: 71 GVSLSQSLLVQILLRLRGASKLALSLLNSARLHPSPSVSSPPNADAYDAVVDALGRAHQF 130
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE-- 139
D AW L+ E T +T +L RRY A +A+ AF + F VG E
Sbjct: 131 DAAWRLVVE----AAADGAATSRTFAVLARRYVAAGMTRQAVRAFDDMEAF---VGREPD 183
Query: 140 --DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+F LL LC+YK + A + K + N K + I++ GWC + + +++
Sbjct: 184 AGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKV-NRNDMSQKFLK 242
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLR----------LFDQMKRMGIECDRKVYN 247
+M GI +VV+++ +++ + +LH R L +M+ GIE D Y+
Sbjct: 243 DMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDVTSYS 302
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
V+H ++ + + + +SM+++G+ P V TY S+IK L +L++A + EM
Sbjct: 303 IVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAERLLHEMASE 362
Query: 308 GISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ-----PTNDTYIMLIKKFSRWRQFG 362
G+ P+ TY+ F R ++V G LE +KM P +Y +L+ F + Q G
Sbjct: 363 GVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQHG 422
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V ++WN++ E+ GPD SYT LIH N K EA Q++MEM EK LP+ T E+L
Sbjct: 423 TVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFLPQKITFEIL 481
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 11/221 (4%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R A L+ EMR P + + I++ Y H + F + K +
Sbjct: 277 RTVRAAEDLLKEMRDRGIEPDVTSYS---IVLHVYSRAHKAELCLCMFRSMKDRGICPTV 333
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN---GWCNIIGSSREAE 193
+ ++ L ++DAE L+ ++ V P + ++N G ++IG+ +
Sbjct: 334 ATYTSVIKCLASCGRLEDAERLLHEMASEGVCP-SPATYNCFFKEYRGRKDVIGALELYK 392
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+ M+ D+ S+ ++ + K V L++ M + D Y +IH
Sbjct: 393 K--MKAPASPTAPDIHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGF 450
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ ++A M EKG P +T+ L + L +A L
Sbjct: 451 CENEKWREACQFFMEMIEKGFLPQKITFEILYRGLIQADML 491
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 189/373 (50%), Gaps = 27/373 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ LG+ R+FD AW L+ E T +T +L RRY A +A+ AF
Sbjct: 106 YDAVVDALGRARQFDAAWRLVVEAAADGAA----TPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 128 AYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+ F VG E +F LL LC+YK + A + K + N K + +++ GWC
Sbjct: 162 DMEAF---VGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWC 218
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR----------LFDQ 233
+ + A++ +M GI ++V+++ +++ + +LH R L +
Sbjct: 219 KV-NRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKE 277
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + GIE + Y+ ++H ++ + + + +SM+E+G+ P V TY S+IK L +
Sbjct: 278 MHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGR 337
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTND--TY 348
LD+A DEM G+ P+ TY+ F R ++V G L+ KM G T D TY
Sbjct: 338 LDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+L+ F + Q V +VWN++ E+ GPD +SYT L+H L N K EA Q++MEM E
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 409 KQLLPEPKTDELL 421
+ LP+ T E L
Sbjct: 458 RGFLPQKITFETL 470
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 201/406 (49%), Gaps = 19/406 (4%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
K S ELV EVL+ + N A +FF WA KQS + H+T +H +I LGK+R+F W L
Sbjct: 83 KPSPELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTL 142
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+++M+ + L+T T ++ RRY AI F + + + DF L+
Sbjct: 143 VNDMKQRK----LLTSDTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDV 198
Query: 148 LCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQR 202
LC+ K+V++A H +F K + KS+ I+L GW N+I + V EM +
Sbjct: 199 LCKSKSVEEA-HEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLI----KVNEVCREMEDK 253
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G DVV++ I++ + KA+ + + L+ +MK G+ VY +I+ L + + +A
Sbjct: 254 GFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEA 313
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + + G P TYN+++ C + ++D+A + EM + GI P RT+ L
Sbjct: 314 LEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHH 373
Query: 323 IRTGEEVFGLLESMRKM-----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ G + R+M GC+P+ TY ++++ F VW+E+ G
Sbjct: 374 LIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGIL 433
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P ++ L+ AL KL+EA +Y+ EM + + P K L++
Sbjct: 434 PGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKE 479
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 11/410 (2%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ--SGYAHSTREYHT 70
K S + +++ ++V+ ++ VL + N A+ FF WA KQ G H+ R YHT
Sbjct: 49 QKASGLELELDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWARKQKRGGCNHTIRSYHT 108
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
++A L K+R++ W ++ MR +V +T I++R+Y A+ F +
Sbjct: 109 VVASLAKIRQYQLMWDVVAIMRR----EGVVNVETFGIIMRKYARAQKFDEAVYTFNIME 164
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
++ + F LL ALC+ KNV+ A+ + F + K+++I+L GW +
Sbjct: 165 KYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPNLPK 224
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E V+ EM G D+V++ ++ K + + + + M G + +Y+ ++
Sbjct: 225 MRE-VYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLV 283
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H ++DA++ ME+ G+ P+VV YN+L+ CK +K + A + D+M GI+
Sbjct: 284 HTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIA 343
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P RT++ L+ +I G +E + + M K CQP +DTY M+IK F KV
Sbjct: 344 PNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKV 402
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
W + P +++ LI+ L G++ +A +M EK + P T
Sbjct: 403 WKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGST 452
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 10/240 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ L K + + A ++ +M P+ +L+ Y + A+ F
Sbjct: 244 YGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYS---VLVHTYGVEMRIEDAVATFL 300
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
++ + + L++A C+ K ++A +M + P N++++NIILN ++
Sbjct: 301 DMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAP-NSRTWNIILNKLISL 359
Query: 186 IGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EA RV+ M +R C D +++ +I + + N+ L+++ M+
Sbjct: 360 -GKDDEAYRVFRRMIKR--CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMH 416
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
++ +I+ L V A L++ M EKG+ P T+ L + L K + D D+M
Sbjct: 417 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKM 476
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 127/308 (41%), Gaps = 46/308 (14%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA +TF + ++ G + +++++ L K + A + D+M G P +T
Sbjct: 155 EAVYTFNIM--EKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKM-NGRFNPD---AKT 208
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
IL+ + ++ + + I + ++ +LC+ V++A + +
Sbjct: 209 YSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEA---VLVVQ 265
Query: 166 DVFPFNTKSFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
D+ + I + + G +A +++M + GI DVV ++ +++ + K +
Sbjct: 266 DMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVK 325
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-----------GRLVK------DAISL 265
R+ D M+ GI + + +N +++ L R++K D ++
Sbjct: 326 KFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTM 385
Query: 266 M-----------------KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
M K M K P++ T++ LI LC ++ +A ++M+++G
Sbjct: 386 MIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKG 445
Query: 309 ISPTIRTY 316
I P T+
Sbjct: 446 IRPPGSTF 453
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 193/402 (48%), Gaps = 7/402 (1%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
+S ++ + GI +S ++V++VL+ EA TFF WA ++ G Y ++
Sbjct: 101 KSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRA 160
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ + F ++ M P L + L I + + VH V RAI F + F
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
E F LL LC +V A+ + K PF++ S+NI+++GW + G E E+
Sbjct: 218 KCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKL-GEVEEMEK 276
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V EM + G D +S+S +I + ++ + +FD +K G D VYNA+I
Sbjct: 277 VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFI 336
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
R +++ + M ++ PN+ TY+ L+ L K RK+ +A + F+EML RG+ PT
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG 396
Query: 315 TYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+FL + + + + RK GC+ + Y +L+K+ SR+ + G + VW+E+
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E+G D Y ++ L + G LE A E K P
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G+ DV S+S I+ + + ++ + M G+ D + + + + V+
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
AI L + E GV + ++N+L++ LC+ + A+ F+ ++G P +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSY--- 258
Query: 321 DIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+I+ +G G +E M K+ G P +Y LI+ R + + ++++ I
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GN PD + Y A+I +E+ +YY M +++ P +T
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 7/246 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG+ Y +I LG+ + + + + D ++ P + I + +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM---ICNFISAR 339
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D ++ + + +E + L+S L + + V DA + ++ V P T
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP-TTGLV 398
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
L C+ G A ++ + + G ++ ++ S+ +L ++D+M+
Sbjct: 399 TSFLKPLCSY-GPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQ 457
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D +VY ++ L +++A+ +M+ KG PN Y+ L L + K +
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Query: 296 EARQAF 301
A + F
Sbjct: 518 LAYKLF 523
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 192/402 (47%), Gaps = 7/402 (1%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
+S ++N + GI +S ++VS+VL+ EA TFF WA ++ G + Y ++
Sbjct: 96 KSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDVDSYCVILRA 155
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ + F ++ M P L + L I + + H V RAI F + +
Sbjct: 156 LGRRKFFSFMMDVLRGMVCEGVNPDL---RCLTIAMDSFVRAHYVRRAIELFEESESYGV 212
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
E F LL LC +V A + K PF++ S+NI+++GW + G E+
Sbjct: 213 KCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSYNIMISGWSKL-GEIEGMEK 271
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V EM + G D +S+S +I +A ++ + +FD MK G D VYNA+I
Sbjct: 272 VLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYNAMICNFI 331
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
R +++ + M ++ PN+ TY+ L+ L K RK+ +A + F+EML RGI PT
Sbjct: 332 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGILPTTG 391
Query: 315 TYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+FL + + + + RK GC+ + Y +L+K+ SR+ + G + VW+E+
Sbjct: 392 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 451
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E G D Y ++ L + G LE A E K P
Sbjct: 452 QECGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 493
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 97/222 (43%), Gaps = 12/222 (5%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ DV S+ I+ + + ++ + M G+ D + + + + V+ A
Sbjct: 141 GVSKDVDSYCVILRALGRRKFFSFMMDVLRGMVCEGVNPDLRCLTIAMDSFVRAHYVRRA 200
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
I L + E GV + ++N+L++ LC+ + A F+ ++G P + +I
Sbjct: 201 IELFEESESYGVKCSTESFNALLRCLCERSHVSAANSVFNA--KKGKIPFDSCSY---NI 255
Query: 323 IRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ +G G +E M K+ G P +Y LI+ R + + ++++ + G
Sbjct: 256 MISGWSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKG 315
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ D + Y A+I +E+ +YY M +++ P +T
Sbjct: 316 SVLDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 357
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 138/325 (42%), Gaps = 26/325 (8%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
E+ + E G+K S+E + +L + R+ AA + F K+ + Y+ MI+
Sbjct: 202 ELFEESESYGVKCSTESFNALLRCLCERSHVSAANSVF--NAKKGKIPFDSCSYNIMISG 259
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K+ + + ++ EM G P ++ L+ + R GR ++ + K
Sbjct: 260 WSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGR------AGRINDSVEIFDNMKH 313
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM-----FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ D + +C + + +D + M +++ P N ++++ +++G I G
Sbjct: 314 KGSVLDANVYNAMICNFISARDFDESMRYYRRMLDEECEP-NLETYSKLVSGL--IKGRK 370
Query: 190 -REAERVWMEMSQRGICYD---VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+A ++ EM RGI V SF + Y H + ++ + ++ G
Sbjct: 371 VSDALEIFEEMLSRGILPTTGLVTSFLKPLCSYGPP---HAAMVIYQKSRKAGCRISESA 427
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ L++ +++ M+E G +V Y ++ LC L+ A +E +
Sbjct: 428 YKLLLKRLSRFGKCGMLLNVWDEMQECGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAM 487
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVF 330
++G P R ++ L IIR ++ F
Sbjct: 488 RKGFCPN-RFVYSRLSIIRKWQQKF 511
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 206/416 (49%), Gaps = 21/416 (5%)
Query: 18 MRNKIEECG-IKVSSELVSEVLSWVRNDWEAAFTFFLWA-GKQSGYAHSTREYHTMIAIL 75
+R EC ++++S + +L +DW++A FFLWA + GY+H+ + M+ +L
Sbjct: 73 VRTLAAECSEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGYSHTPCACNRMVDLL 132
Query: 76 GKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
GK+R+ D W L+ EM RG LVT T+ IRR A AI F +
Sbjct: 133 GKMRQIDRMWDLLSEMHCRG------LVTVDTIAKSIRRLAAARRWRDAILLFDQLEDLG 186
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
E LL ALC+ + V+ A + + +FNI ++GWC++ R E
Sbjct: 187 LERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSV---RRIDE 243
Query: 194 RVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+W EM RG V++++ ++ Y K RN +V + D M G + Y ++
Sbjct: 244 AMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMT 303
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+L K ++A+S+ M+ G P+ + YN+LI L +A L EA Q F + R + P
Sbjct: 304 SLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNVVP 363
Query: 312 -TIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK-KFSRWRQFGNVFK 366
+ TY+ + I+ ++ +L+ M C+P TY L++ F R Q G +
Sbjct: 364 RNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIHH 423
Query: 367 VWNEISE-NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ +E+ + NG G D +YT LIH L G+ + A+Q Y EM +++P PKT ELL
Sbjct: 424 LLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTCELL 479
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 195/392 (49%), Gaps = 12/392 (3%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+ ELV++ L + N A FF + Y HS + + I ++R F++AWAL+
Sbjct: 65 TPELVNKTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALV 124
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR GPS +TL IL RY ++ RA+ F + + F LL L
Sbjct: 125 GRMRSLRLGPS---PKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDIL 181
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
C+ V+ A L+ K F +T S+NI+ NG+C + + A RV EM QRGI +
Sbjct: 182 CKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYC-LKKRTPMALRVLKEMVQRGIEPTM 240
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V+++ ++ Y ++ + + + +MK+ E D Y VIH + VK A +
Sbjct: 241 VTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDE 300
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI-SPTIRTYHAFL-DIIRTG 326
M ++GVAPNV TYN+LI+ CK + A F+EM++ G+ SP + T++ + + G
Sbjct: 301 MVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVG 360
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E G +E M + G + + TY ++I+ F + +V+ ++ + P+ +Y
Sbjct: 361 DMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYN 420
Query: 385 ALIHALFLNGKLEE---AHQYYMEMKEKQLLP 413
LI A+F+ K E+ A + MEM E+ LP
Sbjct: 421 VLISAMFVRKKSEDLVVAGKLLMEMVERGFLP 452
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 33/219 (15%)
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y+ H+ +R F M G+ D +N ++ L K V+ A L+++++ + P+
Sbjct: 146 YASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRPD 204
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMR 337
V+YN L C ++ A + EM+QRGI
Sbjct: 205 TVSYNILANGYCLKKRTPMALRVLKEMVQRGI---------------------------- 236
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+PT TY ++K + R Q ++ + E+ + D SYT +IH G+++
Sbjct: 237 ----EPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVK 292
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+A + + EM ++ + P T L K V+ +A
Sbjct: 293 KAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVA 331
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 9/246 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+TM+ + + AW EM+ + +V+ T+ I +
Sbjct: 233 QRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTV---IHGFGEAG 289
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A F + A + + L+ C+ +VQ+A + + V N +F
Sbjct: 290 EVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTF 349
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++ G C++ G A M + G+ V +++ +I + A + K L +F +M
Sbjct: 350 NVVIRGLCHV-GDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMG 408
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAI---SLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ YN +I A+ + +D + L+ M E+G P T+N ++ L
Sbjct: 409 DGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITG 468
Query: 293 KLDEAR 298
D A+
Sbjct: 469 NQDFAK 474
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 228/486 (46%), Gaps = 33/486 (6%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A L + ++ S+M ++ G++++++LV E+L + + + AF FF+WAG Q
Sbjct: 236 ADKLYKAIANNANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDC 295
Query: 61 YAHSTREYHTMIAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
Y+H R Y+ MI IL KV++F ++D M+ + V + LL+++R+Y
Sbjct: 296 YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKS--VPVEVLLMILRKYTEK 353
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
H A R K I LL ALC+ V+DA+ + K+ + ++N
Sbjct: 354 HLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYN 413
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ GWC + SR RV EM + G D +++ I + KA + + LF+ M+
Sbjct: 414 ILFFGWCRVRNPSR-GMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRT 472
Query: 237 MGIECDR---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
G K Y +I AL + ++ L+K M GV P+V TY +I+ +C A K
Sbjct: 473 KGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGK 532
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA + +EM +G P I TY+ FLD++ + EE GL M + GC P+ T+ M
Sbjct: 533 VEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNM 592
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + F+ W+E+ + G D +Y +I LF K+E+A E+ K
Sbjct: 593 LISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKG 652
Query: 411 L-LPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETR 469
+ LP K D L S I L+A I K S+ R+F R
Sbjct: 653 IKLPYRKFDCFLMQLS--------MIGDLQA-----------IHKLSEHMRKFYNPAMAR 693
Query: 470 RVVRHQ 475
R +Q
Sbjct: 694 RFALNQ 699
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 228/486 (46%), Gaps = 33/486 (6%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A L + ++ S+M ++ G++++++LV E+L + + + AF FF+WAG Q
Sbjct: 209 ADKLYKAIANNANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDC 268
Query: 61 YAHSTREYHTMIAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
Y+H R Y+ MI IL KV++F ++D M+ + V + LL+++R+Y
Sbjct: 269 YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKS--VPVEVLLMILRKYTEK 326
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
H A R K I LL ALC+ V+DA+ + K+ + ++N
Sbjct: 327 HLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYN 386
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ GWC + SR RV EM + G D +++ I + KA + + LF+ M+
Sbjct: 387 ILFFGWCRVRNPSR-GMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRT 445
Query: 237 MGIECDR---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
G K Y +I AL + ++ L+K M GV P+V TY +I+ +C A K
Sbjct: 446 KGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGK 505
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA + +EM +G P I TY+ FLD++ + EE GL M + GC P+ T+ M
Sbjct: 506 VEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNM 565
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + F+ W+E+ + G D +Y +I LF K+E+A E+ K
Sbjct: 566 LISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINKG 625
Query: 411 L-LPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETR 469
+ LP K D L S I L+A I K S+ R+F R
Sbjct: 626 IKLPYRKFDCFLMQLS--------MIGDLQA-----------IHKLSEHMRKFYNPAMAR 666
Query: 470 RVVRHQ 475
R +Q
Sbjct: 667 RFALNQ 672
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 204/437 (46%), Gaps = 11/437 (2%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A + +IL++ + + E GI + +LVS++L N W A F+WA Q+G
Sbjct: 107 AHKVGEILKKHYLSEDAVVEALNESGISATHDLVSQLLKRFSNQWLIALGVFIWAKNQTG 166
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y H Y++MI ILGK RKF W L+ EM G SLVT ++ +R
Sbjct: 167 YVHKPEIYNSMIDILGKSRKFSLMWDLVQEMSGLNGYVSLVTMGKVM---KRLVRDGKYN 223
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
AI+AF ++F + E L+ L R V+DA + + + +S+NI+ +
Sbjct: 224 EAIDAFRGLEKFGLSKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSS 283
Query: 181 GWCN--IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C + G +R + EM +RG +VVS++ I Y + ++ V + ++M+ G
Sbjct: 284 GYCKARMFGDAR---KTMEEMEERGFHPNVVSYTAFIEAYGEQKDFRNVEIILNEMQEKG 340
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D Y I AL K R + A+ + + ++ G Y SLI LC + +L +A
Sbjct: 341 CPPDLITYTVYIRALGKARQINKALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAW 400
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F+++ ++G+ + Y A + + E LL M + C+P TY L+K
Sbjct: 401 NIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMC 460
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R + + + N + EN D +Y L+H L GKL+ A ++ E K ++P
Sbjct: 461 CRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGLRKQGKLKYACFFFQEAVLKGMVPCD 520
Query: 416 KTDELLQDWSYNKQFVE 432
KT ++L + K E
Sbjct: 521 KTYKILLEELERKNMAE 537
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 202/417 (48%), Gaps = 6/417 (1%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
ILR++ + ++ + E G+ V L VL+ + A+ F+ WA KQSG+
Sbjct: 72 ILRKYHSRVPKLELALRESGVVVRPGLTERVLNRCGDAGNLAYRFYSWASKQSGHRLDHD 131
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y MI +L ++R+F WALI+EMR + P L+T Q +IL+RR+ + V +A+
Sbjct: 132 AYKAMIKVLSRMRQFGAVWALIEEMR--QENPHLITPQVFVILMRRFASARMVHKAVQVL 189
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ F LL AL + +V++A L + + + K F +L GWC
Sbjct: 190 DEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCKE- 248
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+ V ++M GI D+V ++ ++ Y++A + L +M+R G E + Y
Sbjct: 249 GKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSY 308
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I +L K +++A + M+ G ++VTY++LI CK K+ + DEM+Q
Sbjct: 309 TVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQ 368
Query: 307 RGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P Y + + EE L+ M+K+GC P Y +I+ + +
Sbjct: 369 QGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKE 428
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++WNE+ +G P ++ +I+ G L EA +Y+ EM + L P+ L
Sbjct: 429 GVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTL 485
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQ-PTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
Y A + ++ R V+ L+E MR+ T +++L+++F+ R +V +E
Sbjct: 132 AYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDE 191
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQF 430
+ G PD + L+ AL NG ++EA + E++ + LL W +
Sbjct: 192 MPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCKEGKL 251
Query: 431 VE 432
+E
Sbjct: 252 ME 253
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 195/406 (48%), Gaps = 15/406 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI+++ +V +L +DW++A FF WA + Y H+ + M+ +LGK+R+ D W
Sbjct: 77 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 136
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
L+ +M G LVT +T+ IRR + F + E LL
Sbjct: 137 ELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLL 192
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRG 203
LC+ + ++ A + P + +FNI ++GWC+I R E +W EM +RG
Sbjct: 193 DVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSI---RRIDEAMWTIEEMKRRG 249
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V++++ ++ Y K RN +V + D M G + Y ++ +LAK ++A+
Sbjct: 250 FPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEAL 309
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDI 322
S+ M+ G P+ + YNSLI L K+ L EA Q F EM G+S + TY+ + I
Sbjct: 310 SVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISI 369
Query: 323 I---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF-SRWRQFGNVFKVWNEISENGN-G 377
++ +L+ M C+P +Y L++ F SR Q V + +E++ N G
Sbjct: 370 FCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLG 429
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT LIH L G A+Q + EM ++ P KT +L D
Sbjct: 430 LDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 475
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 195/406 (48%), Gaps = 15/406 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI+++ +V +L +DW++A FF WA + Y H+ + M+ +LGK+R+ D W
Sbjct: 43 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 102
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
L+ +M G LVT +T+ IRR + F + E LL
Sbjct: 103 ELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLL 158
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRG 203
LC+ + ++ A + P + +FNI ++GWC+I R E +W EM +RG
Sbjct: 159 DVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSI---RRIDEAMWTIEEMKRRG 215
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V++++ ++ Y K RN +V + D M G + Y ++ +LAK ++A+
Sbjct: 216 FPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEAL 275
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDI 322
S+ M+ G P+ + YNSLI L K+ L EA Q F EM G+S + TY+ + I
Sbjct: 276 SVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISI 335
Query: 323 I---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF-SRWRQFGNVFKVWNEISENGN-G 377
++ +L+ M C+P +Y L++ F SR Q V + +E++ N G
Sbjct: 336 FCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLG 395
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT LIH L G A+Q + EM ++ P KT +L D
Sbjct: 396 LDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 441
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 209/438 (47%), Gaps = 24/438 (5%)
Query: 3 TLVDILREFS-HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGY 61
TL +IL++ +R ++ GI+ L+ V + + + FLWA K+ G+
Sbjct: 84 TLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGF 143
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
S +++M+ LGK R+F +AW L+ + GG G LV+ T ILIRRY R
Sbjct: 144 QSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYT------R 197
Query: 122 AINAFYAYKRFKFA----------VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF- 170
A + A + F++A G F+ LL +LC+ +V+ A + P
Sbjct: 198 AGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCW 257
Query: 171 --NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ + +NI+LNGW + AER+W+EM ++ + VV++ ++ YS+ R + + +
Sbjct: 258 VPSVRIYNILLNGWFRS-RKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAI 316
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D+MKR GI+ + VYN +I ALA+ K+ + +M+ P + TYNSL+K
Sbjct: 317 ELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGY 376
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTN 345
CKA L A + M+ R + PT TY+ F R EE L M + G P
Sbjct: 377 CKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDR 436
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +L+K + ++ E+ G D ++ T H L + EEA + +
Sbjct: 437 LTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFED 496
Query: 406 MKEKQLLPEPKTDELLQD 423
M + ++P+ T L D
Sbjct: 497 MLRRGIVPQYLTFHRLND 514
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 195/406 (48%), Gaps = 15/406 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI+++ +V +L +DW++A FF WA + Y H+ + M+ +LGK+R+ D W
Sbjct: 31 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 90
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
L+ +M G LVT +T+ IRR + F + E LL
Sbjct: 91 ELLSDMHG----RGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLL 146
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRG 203
LC+ + ++ A + P + +FNI ++GWC+I R E +W EM +RG
Sbjct: 147 DVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSI---RRIDEAMWTIEEMKRRG 203
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V++++ ++ Y K RN +V + D M G + Y ++ +LAK ++A+
Sbjct: 204 FPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEAL 263
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDI 322
S+ M+ G P+ + YNSLI L K+ L EA Q F EM G+S + TY+ + I
Sbjct: 264 SVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISI 323
Query: 323 I---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF-SRWRQFGNVFKVWNEISENGN-G 377
++ +L+ M C+P +Y L++ F SR Q V + +E++ N G
Sbjct: 324 FCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLG 383
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT LIH L G A+Q + EM ++ P KT +L D
Sbjct: 384 LDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLD 429
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 196/404 (48%), Gaps = 12/404 (2%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
I +S +LV +L ++DW++A F WA + + HS+ Y M+ ILG+++ +
Sbjct: 71 IPLSRDLVHRLLWRYKDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRD 130
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L++EMR G LV T+ +RR+ A+ F + E LL
Sbjct: 131 LLEEMREG----GLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLD 186
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
LC+ K VQ A + K N +FNI ++GWC I EA EM G
Sbjct: 187 TLCKEKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVD-EAHWTIQEMKGYGFHP 245
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
V+S+S +I CY + N +V L D+M+ G + Y +++ AL K + ++A+ +
Sbjct: 246 CVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVP 305
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDIIRT 325
+ M G P+ + +NSLI L +A +LD+A F EM + G+SP TY++ + +
Sbjct: 306 ERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCY 365
Query: 326 GEEVFGLLESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVF-KVWNE-ISENGNGPD 379
+ LE +++M GC+P TY LIK R + V ++ N+ I++ D
Sbjct: 366 HAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLD 425
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
S+YT LIH L + A + EM ++ ++P +T LL D
Sbjct: 426 LSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLD 469
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 19/258 (7%)
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K+ + D A I EM+G P +++ TL I+ YC + R + +
Sbjct: 224 KICRVDEAHWTIQEMKGYGFHPCVISYSTL---IQCYCQEGNFSRVYELLDEMQAQGCSA 280
Query: 137 GIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ + ++ AL + K ++A + C D FN+ + G
Sbjct: 281 NVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTL------GRAGRLD 334
Query: 191 EAERVW-MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNA 248
+A V+ +EM + G+ + +++ +IS + + L + +M+ G + D + Y+
Sbjct: 335 DAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHP 394
Query: 249 VIHALAKGRLVKDAIS--LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + + + +S L + ++ ++ ++ TY LI LC+ + + A F+EM+
Sbjct: 395 LIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMID 454
Query: 307 RGISPTIRTYHAFLDIIR 324
+ I P RT LD ++
Sbjct: 455 QDIIPRYRTCRLLLDEVK 472
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 209/417 (50%), Gaps = 7/417 (1%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++ + SS LVS+VL+ NDW A FF WA +GY HS Y+ M+ ILGK R F
Sbjct: 118 LDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSLTGYRHSPELYNLMVDILGKCRSF 177
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D+ L++EM E VT +T+ ++RR AI AF ++F
Sbjct: 178 DSMSELVEEMARLE---GYVTLETMTKVMRRLARARKHEDAIEAFGRMEKFGVKKDTAAL 234
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L+ AL + +V+ A ++ K P +++SFN++++GWC A + +M +
Sbjct: 235 NVLIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFD-NARKAMEDMKE 293
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G DV S++ I Y R+ KV ++ ++M+ G + Y +V+ L K ++
Sbjct: 294 HGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRK 353
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ + + M+ G + Y+S+I L KA +L +A F++M ++G+ + TY++ +
Sbjct: 354 ALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMIS 413
Query: 322 II---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E LL+ M C+P TY L+K + ++ + + + + +N P
Sbjct: 414 TACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISP 473
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
D ++Y+ L++AL +GK+E+A+ + EM + P+P T + L +K +E ++
Sbjct: 474 DLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKV 530
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 11/440 (2%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH 63
+ D L + ++ ++ +C + V+ LV +VL N W A+ FF+WA Q+GY H
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S Y+ M+ +LGK R FD W L++EM E LVT T+ ++RR +A+
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEES-KLVTLDTMSKVMRRLAKSGKYNKAV 223
Query: 124 NAFYAY-KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
+AF K + L+ AL + +++ A + D + ++FNI+++G+
Sbjct: 224 DAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283
Query: 183 CNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + R M+ M DVV+++ + Y K + +V + ++M+ G
Sbjct: 284 CK--ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y V+H+L K + V +A+ + + M+E G P+ Y+SLI L K + +A + F
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 302 DEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRK---MGCQPTNDTYIMLIKKF 355
++M +G+ + Y+ + E LL+ M C P +TY L+K
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
++ + + + + +N D S+Y LI L ++GK+EEA ++ E K ++P
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 521
Query: 416 KTDELLQDWSYNKQFVERQI 435
T ++L D K E ++
Sbjct: 522 STCKMLVDELEKKNMAEAKL 541
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 210/413 (50%), Gaps = 21/413 (5%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S+ + E++ + GI +S +L+ VL VR + F+ +AG + G+ HS+
Sbjct: 51 SNLQGELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYAGARRGFYHSSFSL 110
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
TM+ ILG+ RKFD W ++ E + + SL++ +T+ +++ R + V + + +F+
Sbjct: 111 DTMLYILGRNRKFDQIWEILIETKRKDR--SLISPRTMQVVLGRVAKLCSVRQTVESFWK 168
Query: 129 YKR-----FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+KR F A F LL LC+ K++ DA ++ K F + ++FNI+L+GW
Sbjct: 169 FKRLVPDFFDTAC----FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW- 223
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
SS EAE + EM +G+ DVV+++ +I Y K R + K +L D+M+ D
Sbjct: 224 ---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDV 280
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y +I L A ++K M+E G P+V YN+ I+ C AR+L +A + DE
Sbjct: 281 ITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDE 340
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M+++G+SP TY+ F ++ ++ + L E M GC P + + LIK F R +
Sbjct: 341 MVKKGLSPNATTYNLFFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEK 400
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++W ++ G G L+ L K+EEA + +EM EK P
Sbjct: 401 VDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRP 453
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIEC---DRKVYNAVIHALAKGRLVKDAISLM 266
SFS Y RN R FDQ+ + IE DR + + + GR+ K S+
Sbjct: 107 SFSLDTMLYILGRN-----RKFDQIWEILIETKRKDRSLISPRTMQVVLGRVAK-LCSVR 160
Query: 267 KSMEE----KGVAPN---VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+++E K + P+ +N+L++ LC+ + + +AR + L+ P ++T++
Sbjct: 161 QTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNIL 219
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L ++ EE E M+ G +P TY LI + + R+ +K+ +++ E PD
Sbjct: 220 LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPD 279
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+YT +I L L G+ ++A + EMKE P+
Sbjct: 280 VITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPD 314
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 200/421 (47%), Gaps = 14/421 (3%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+ M N + + GI +S+ LV+ L +R D + A FF WAG Q Y+H Y+ M+ IL
Sbjct: 8 NNMENALGQLGIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDIL 67
Query: 76 G----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
KV++F +++ M+ ++V + LL+++R+Y + A R
Sbjct: 68 SSTRYKVKQFRIVCDVLEYMK--RNNRTMVPAEVLLVILRKYTEKYLTHMQKFAKKKRIR 125
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
K + I F LL ALC+ V+DAE L + N +++NI++ GWC + +R
Sbjct: 126 VKTQLEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTR- 184
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNA 248
++ EM + G D +++ I Y K + + + LF+ M+ G K Y
Sbjct: 185 GMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAI 244
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I ALA+ ++D L+ M G P+V TY +I+ +C K+DEA + +EM +
Sbjct: 245 IIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKS 304
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P I TY+ FL ++ + E+ L M ++ C P+ TY MLI F F
Sbjct: 305 YRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAF 364
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME-MKEKQLLPEPKTDELLQDW 424
+ W EI G PD +Y +I LF K+E+A E + E LP K D L
Sbjct: 365 ETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQL 424
Query: 425 S 425
S
Sbjct: 425 S 425
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 232/476 (48%), Gaps = 34/476 (7%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
TL ++L + + K + +++ GIK + L++ V + + + F+WA KQ +
Sbjct: 63 TLCNLLSDPNLK--PLETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQPEFE 120
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
ST ++++I LGK+++FD+AW L+ + G LV+ T ILIRRY RA
Sbjct: 121 SSTTLFNSVINALGKMKEFDSAWCLVLDRTG------LVSSDTFAILIRRYT------RA 168
Query: 123 INAFYAYKRFKFAVGIE---DF------QGLLSALCRYKNVQDAEHLMFCNKDV----FP 169
A + F++A+ ++ D+ + LL +LC+ +V+ A+ K + P
Sbjct: 169 GMPQSAIRTFEYAISLDFICDYNCDALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIP 228
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ + +NI+LNGW + AER+W+EM + + VV++ ++ Y + R + + +
Sbjct: 229 -HVRIYNIMLNGWFRS-RKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIE 286
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L D M++ GIE + VYN +I ALA+ K+ +M+ + P + TYNSL+K C
Sbjct: 287 LVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYC 346
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTND 346
KA+ A + M+ RG PT TY+ F + G EE L M + G P
Sbjct: 347 KAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRL 406
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
T+ +L+K + ++ E+ G D ++ T LIH + EEA + +M
Sbjct: 407 TFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDM 466
Query: 407 KEKQLLPEPKTDELLQDWSYNKQFVE--RQIASLKAHQPQSGQNTRVISKKSDQDR 460
+K ++P+ T + L D + VE R+++ + + P S S + D R
Sbjct: 467 IQKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTYSVEGDALR 522
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 195/395 (49%), Gaps = 12/395 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTREYHTMIAILGKVRKFDTAW 85
I+ + +LV++V+ + N A FF + Y HS + + I ++R F++AW
Sbjct: 65 IQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAW 124
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
AL+ MR GPS +TL IL RY + RA+ F + + F LL
Sbjct: 125 ALVGRMRSLRLGPS---PKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLL 181
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ K V+ A L+ F +T ++NI+ NG+C +I + A RV EM QRGI
Sbjct: 182 DILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYC-LIKRTPMALRVLKEMVQRGIE 240
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+V+++ ++ Y ++ + + + +MK+ E D Y VIH VK A +
Sbjct: 241 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRV 300
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS-PTIRTYHAFL-DII 323
M ++GV PNV TYN+LI+ LCK ++ A F+EM + G+ P + TY+ + +
Sbjct: 301 FHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLC 360
Query: 324 RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G E G +E M + G + TY ++I+ F + +V+ ++ + P+
Sbjct: 361 HVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLD 420
Query: 382 SYTALIHALFLNGKLEE---AHQYYMEMKEKQLLP 413
+Y LI A+F+ K E+ A + M+M ++ LP
Sbjct: 421 TYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLP 455
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 33/219 (15%)
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y+ H+ +R F M GI D +N ++ L K + V+ A SL+K++ + P+
Sbjct: 149 YASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPD 207
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMR 337
VTYN L C ++ A + EM+QRGI
Sbjct: 208 TVTYNILANGYCLIKRTPMALRVLKEMVQRGI---------------------------- 239
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+PT TY ++K + R Q ++ + E+ + D +YT +IH + G ++
Sbjct: 240 ----EPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVK 295
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+A + + EM ++ ++P T L K VE +
Sbjct: 296 KAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVV 334
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 16/407 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
I +S ELV ++L ++DW++A F WA ++GY HS Y TM+ I+GK+++ D
Sbjct: 46 SIHLSHELVDKLLFRFKDDWKSALGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQME 105
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
L++EM G+ VT +T+ +RR+ + F F E LL
Sbjct: 106 FLLEEMEKGQH----VTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLL 161
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRG 203
LC+ + V+ A + K N +FNI ++GWC + +R E W EM G
Sbjct: 162 DTLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKV---NRVEEAYWTIQEMKGHG 218
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V+S+S I+ Y N KV L D+M+ G+ + Y +V+ ALAK ++A+
Sbjct: 219 CTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEAL 278
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDI 322
+ + M+ G P+ + YNSLI L KA + +EA Q F+ EM G+ P TY++ + +
Sbjct: 279 QIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAM 338
Query: 323 I---RTGEEVFGLLESMR-KMGCQPTNDTYIMLIKKFSRWRQFGNVFK--VWNEISENGN 376
+ + LL+ + + C+P TY L+K + ++ + + + ++
Sbjct: 339 LCHHSQERKALNLLKEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHL 398
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D S+YT L+H L K E A+ + EM K + P+ +T LL D
Sbjct: 399 SLDFSAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQTCRLLLD 445
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 198/417 (47%), Gaps = 19/417 (4%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI+ +S +V +LS +DW++A F WA Y H+ MI +LGK+R+ D W
Sbjct: 78 GIQPTSNIVDGLLSKFGDDWKSALGLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMW 137
Query: 86 ALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
L+ +M RG LVT + IRR A+ F E
Sbjct: 138 DLLSDMHCRG------LVTVEAAATSIRRLAGARRWKDAVLLFDKLGDMGLERNTETMNV 191
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQ 201
LL ALC+ K V+ A + + +FNI ++GWC+ + R E +W EM
Sbjct: 192 LLDALCKEKKVEVARKVFLVLSPHIQPDAYTFNIFVHGWCS---ARRIDEAMWTIEEMKA 248
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+G V++++ ++ Y K N V + D M G + Y ++ +LAK + ++
Sbjct: 249 QGFPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEE 308
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFL 320
A+S+ M+ G P+ + YNSLI L KA L EA Q F EM G+ ++ TY+ +
Sbjct: 309 ALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMI 368
Query: 321 DII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF-SRWRQFGNVFKVWNEI-SENG 375
+ E+ +L+ M C+P TY L++ F SR Q V + NE+ +++
Sbjct: 369 SVFCYKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHS 428
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G D +YT LIH L G+ + A++ + EM +++P +T ELL + K+ E
Sbjct: 429 LGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELLLSEAQRKKMEE 485
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 201/416 (48%), Gaps = 21/416 (5%)
Query: 18 MRNKIEECG-IKVSSELVSEVLSWVRNDWEAAFTFFLWA-GKQSGYAHSTREYHTMIAIL 75
+R EC ++++S + +L + W+ A FFLWA + GY+H+ M+ +L
Sbjct: 70 VRALAAECSEVRLTSGVADSLLRGCGDCWKPALGFFLWAQSRGGGYSHTPYACSRMVDLL 129
Query: 76 GKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
GK R+ D W L+ EM RG LVT T+ IRR A AI F +
Sbjct: 130 GKTRQIDRMWDLLSEMHCRG------LVTVDTVAKSIRRLAAARKWRDAILLFDQLEDLG 183
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
E LL ALC+ K V+ A + + +FNI ++GWC++ R E
Sbjct: 184 LERNTETMNVLLDALCKEKKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSV---RRIDE 240
Query: 194 RVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+W EM RG V++++ ++ Y K RN +V + D M G + Y ++
Sbjct: 241 ALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMT 300
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGIS 310
+L K ++A+S+ M+ G P+ + YN+LI L +A L EA Q F EM + G+
Sbjct: 301 SLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNGVL 360
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY-IMLIKKFSRWRQFGNVFK 366
+ TY+ + I+ ++ G+L+ M C+P TY +L R Q V +
Sbjct: 361 RNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKPDLQTYQPLLRLLLGRRGQAAAVHR 420
Query: 367 VWNEISE-NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ +E+ + NG G D +YT LIH L G+ + A+ Y EM +++P P+T ELL
Sbjct: 421 LLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYLLYDEMVGSEIVPRPRTCELL 476
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 11/405 (2%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
++E GI +++LVS++L N W A F+WA Q+GY H+ R Y ++ ILGK +KF
Sbjct: 56 LDESGINATNDLVSQLLERFSNQWITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKF 115
Query: 82 DTAWALIDEMR--GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
W +++EM G+ V+ T+ I++RR + I+ ++++
Sbjct: 116 GIMWKVVNEMNELNGQ-----VSFSTMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTV 170
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
++ AL + +DA + KD ++ SFNI+++G+C +A + EM
Sbjct: 171 ALNMVMHALAKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEA-RMLDDARKTMEEM 229
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G D S++C I Y K ++ V + ++M G E D Y+ I AL K R +
Sbjct: 230 EKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKI 289
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+A+ + + M + P+ +++LI L ++ +L++A F++M G+S + TY+A
Sbjct: 290 NEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAM 349
Query: 320 LD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ R G LLE M C+P +TY L+K + + + + + + N
Sbjct: 350 IYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNV 409
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D S+Y LI L +GKLE A ++ + ++P+ +T E+L
Sbjct: 410 RIDLSTYALLIRELAESGKLEHACFFFQDAVLNGIVPKDRTYEIL 454
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 206/432 (47%), Gaps = 18/432 (4%)
Query: 5 VDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS 64
+D L EF++ M + + GI +S+ LV+ VL +R D + A FF WAG Q Y+H
Sbjct: 1 MDNLAEFNN----MEKALGQLGIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHE 56
Query: 65 TREYHTMIAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y+ M+ IL KV++F +++ M+ + V + LL+++R+Y +
Sbjct: 57 PCAYNDMMDILSSTRYKVKQFRIVCDVLEYMK--RNNKTTVPVEVLLVILRKYTEKYLTH 114
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
A R K I F LL ALC+ V+DAE L + N +++NI +
Sbjct: 115 VQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVF 174
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWC + +R ++ EM + G D +++ I Y KA + + + LF+ M+ G
Sbjct: 175 GWCRVRNPTR-GMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSS 233
Query: 241 CDR---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
K Y +I ALA+ +++ L+ M G P+V TY +I+ +C K+DEA
Sbjct: 234 ISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA 293
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +EM + P I TY+ FL ++ + E+ L M ++ C P+ TY MLI
Sbjct: 294 YKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISM 353
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LP 413
F F+ W E+ G PD +Y+ +I LF K+E+A E+ K + LP
Sbjct: 354 FFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLP 413
Query: 414 EPKTDELLQDWS 425
K D L S
Sbjct: 414 YKKFDSFLMQLS 425
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 214/476 (44%), Gaps = 37/476 (7%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
H + +++ G++++++LV VL + + + +F FF+WAG Q Y+H Y+ MI
Sbjct: 11 HNDHNLEKTLDQLGLELTTDLVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMI 70
Query: 73 AILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
IL K R+F ++D M+ ++V + LL ++R Y + + F
Sbjct: 71 DILTSTKYKARQFRIVCDMLDYMK--RNNKNVVPVEVLLTILRNYTEKYLT--RVQKFAK 126
Query: 129 YKRFKFAVG--IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
KR + I F LL ALC+ +DAE L K+ + ++N++ GWC +
Sbjct: 127 KKRIRVKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVR 186
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR--- 243
+R +V EM Q G D ++ I + +A +++ LF+ M+ G
Sbjct: 187 NPTR-GMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTA 245
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
K Y +I AL + + + L++ M G P+V T+ LI+ +C A K+DEA + E
Sbjct: 246 KTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQE 305
Query: 304 MLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +G P I TY+ FL ++ + EE L E M + GC P+ T+ MLI F
Sbjct: 306 MGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGD 365
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDE 419
F+ W E+ + G D +Y +I LF K+E+A ++ K + LP K D
Sbjct: 366 PDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDS 425
Query: 420 LLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQ 475
L S N R I + S+ R F RR V +Q
Sbjct: 426 FLMQLSV-------------------IGNIRAIHRLSEHMRTFHNPSMARRYVLNQ 462
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 202/424 (47%), Gaps = 22/424 (5%)
Query: 29 VSSELVSEVL---SWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
VS LVS V+ + VR+ + A +FF WA + G+ H Y+ MI + GKVR FD
Sbjct: 101 VSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDL 160
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
W +ID M+ S+ +T ILIRRY A++AF + + F
Sbjct: 161 GWQVIDLMKARNVEISI---ETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSI 217
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
L+S LCR + +A+ KD F + + ++ GWC G+ EAERV+ EM G
Sbjct: 218 LISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRA-GNIPEAERVFTEMKVAG 276
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+V +++ +I + + + +F +M +G E + +N ++ K + +
Sbjct: 277 CMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVL 336
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+ M+ G P+ VTYN LI+ CK LDEA + + M+++G SP T++ I
Sbjct: 337 QVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSI 396
Query: 324 RTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+V G L M+++ C+ TY +L++ F + V K+ E+ E+ P+
Sbjct: 397 AKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNV 456
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEM-KEKQLLPE-PKTDELLQDWSYNKQFVERQIASL 438
++Y LI G A++++ EM +EK L P P +++LQ R+ L
Sbjct: 457 NTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQL--------RKAGQL 508
Query: 439 KAHQ 442
K H+
Sbjct: 509 KKHE 512
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/316 (17%), Positives = 114/316 (36%), Gaps = 79/316 (25%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I+IL + R+ A + D ++ + P ++ L +R +C ++ A F
Sbjct: 215 FSILISILCRKRRATEAQSFFDSLKD-KFEPDVIVYTNL---VRGWCRAGNIPEAERVFT 270
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFN--------- 171
K + + ++ ALCR + A H +F C + FN
Sbjct: 271 EMKVAGCMPNVYTYTIVIDALCRCGQITRA-HDVFAEMLDVGCEPNSITFNNLLRVHVKA 329
Query: 172 ---------------------TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
T ++N ++ C G+ EA +V M ++G + +
Sbjct: 330 GRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKD-GNLDEALKVLNSMVKKGCSPNAST 388
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM- 269
F+ + +K R+++ RL+ +MK + + + YN ++ + + L K M
Sbjct: 389 FNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMD 448
Query: 270 -----------------------------------EEKGVAPNVVTYNSLIKPLCKARKL 294
EEK + P++ Y +++ L KA +L
Sbjct: 449 EDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQL 508
Query: 295 DEARQAFDEMLQRGIS 310
+ + M+ RG +
Sbjct: 509 KKHEELVAVMVDRGFA 524
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 206/439 (46%), Gaps = 33/439 (7%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFF--LWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
G+ +S L+ ++L +R + A + + + Y ++ LG+ +FD
Sbjct: 73 GVSLSQGLLVQILLRLRGASKLALSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFDA 132
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF-KFAVGIEDFQ 142
AW L+ E T +T +L RRY A +A+ AF + F ++F
Sbjct: 133 AWRLVVEAAADGAA----TPRTFAVLARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFT 188
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
LL LC+YK + A + K + N K + I++ GWC + S A++ +M
Sbjct: 189 TLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKV-NRSDMAQKFLKDMIDH 247
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLR----------LFDQMKRMGIECDRKVYNAVIHA 252
GI ++V+++ +++ + +LH R L +M GIE D Y+ ++H
Sbjct: 248 GIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHV 307
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
++ + + + +SM+++G+ P V TY S+IK L +L++A EM+ G+ P+
Sbjct: 308 YSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPS 367
Query: 313 IRTYHAFLDIIRTGEEVFGLLESMRKM--GCQPTND---TYIMLIKKFSRWRQFGNVFKV 367
TY+ F R ++V G LE KM C PT +Y +L+ F + + V ++
Sbjct: 368 PATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMEL 427
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE-------- 419
WN++ E GPD SYT L+H K EA Q++MEM EK LP+ T E
Sbjct: 428 WNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYRGLIQ 487
Query: 420 --LLQDWSYNKQFVERQIA 436
+L+ W K+ V+ + A
Sbjct: 488 ADMLRTWRRLKKRVDEESA 506
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 191/391 (48%), Gaps = 6/391 (1%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
SS LVS+VL+ NDW A FF WA Q+GY HS + M+ ILGK + FD L++
Sbjct: 123 SSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVE 182
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
EM E G VT +T+ +IRR AI AF +F L+ AL
Sbjct: 183 EMAKLEQG--YVTLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALV 240
Query: 150 RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
+ +V+ A ++ K + P ++ SFN++++GWC A + +M + G DV
Sbjct: 241 KGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCR-ARKFDNARKAMEDMKELGFEPDVF 299
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
S++ I Y R+ KV ++ ++M+ G + Y V+ L K + A+ + + M
Sbjct: 300 SYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKM 359
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTG 326
+ G + Y+ +I L KA +L +A F++M ++G+ + TY+ +
Sbjct: 360 KCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSRE 419
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E LL+ M C+P TY L+K + ++ + + + + +N PD ++Y+ L
Sbjct: 420 ETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLL 479
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++AL GK+ +A+ + EM K P+P T
Sbjct: 480 VNALCKTGKVADAYSFLEEMVLKGFTPKPST 510
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 219/452 (48%), Gaps = 21/452 (4%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A TL ++ ++ ++ + + I+ + +LV+ +L + N A FF
Sbjct: 29 ATTLAALILNSTNSQT-LAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPS 87
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y H + I I ++R F T W L+ MR GPS +T I+ RY A+
Sbjct: 88 YCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPS---PRTFAIIAERYAAMGKPH 144
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
RA+ F + + + F +L LC+ K V+ A +L K F + S+NII+N
Sbjct: 145 RAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVN 204
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GWC +I + +A + EM +RG+ ++ +++ +++ Y +A ++ F +MK+ +
Sbjct: 205 GWC-LIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCD 263
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D Y +VIH L +K A ++ M + GV P+V T+N+LI+ LCK ++ A
Sbjct: 264 IDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILI 323
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F+EM++RG P TY+ + + GE L+E M C+P TY +LI+ F
Sbjct: 324 FEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFC- 382
Query: 358 WRQFGNVFKVWNEISENGNG---PDRSSYTALIHALFL---NGKLEEAHQYYMEMKEKQL 411
G + K + + GNG P+ +Y LI+++F+ + L A + +EM ++
Sbjct: 383 --DAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGF 440
Query: 412 LPEPKTDELLQD---WSYNKQFVERQIASLKA 440
LP T + D + N+ F ++I SL+
Sbjct: 441 LPRKLTFNRVLDGLLLTGNQDFA-KEILSLQG 471
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 226/464 (48%), Gaps = 22/464 (4%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S + + ++E GI+ S ELV + + + + F WA + G+ S + +++ L
Sbjct: 86 SSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSL 145
Query: 76 GKVRKFDTAWALI-DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF-- 132
K R+F+ AW+L+ D +R E G +LV+ T ++LIRRY V +AI AF + +
Sbjct: 146 CKAREFEIAWSLVFDRVRSDE-GSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEP 204
Query: 133 --KFAVGIEDFQGLLSALCRYKNVQDAEHLM-----FCNKDVFPFNTKSFNIILNGWCNI 185
K A + + LL ALC+ +V++A + + + P + + FNI+LNGW
Sbjct: 205 VCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVP-SVRIFNILLNGWFRS 263
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
++AE++W EM + VV++ +I Y + R + + + ++MK +E + V
Sbjct: 264 -RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV 322
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N +I L + + +A+ +M+ P +VTYNSL+K CKA L A + M+
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 306 QRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG+ PT TY+ F EE L + + G P TY +++K +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+V E+ G PD + T LIH L LEEA + + + ++P+ T +++
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 423 DWSYNKQFVE--RQIASLKAHQPQSGQ--NT--RVISKKSDQDR 460
+ +K + ++++SL + P S + NT + D+DR
Sbjct: 503 NGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDR 546
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 195/408 (47%), Gaps = 12/408 (2%)
Query: 23 EEC-GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
E C I +S LV +L ++DW++A F WA + GY H+ Y M+ ILGK+++
Sbjct: 69 EACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQV 128
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D AL++EMR G +LV T+ +RR + A+ F F+ E
Sbjct: 129 DKMRALMEEMRQG----NLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTESM 184
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL LC+ + V+ A + K NT +FNI ++GWC EAE EM
Sbjct: 185 NLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKA-NRVDEAEWTIQEMKG 243
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G V+S+S II Y + N KV L D M+ G + Y ++ +L K ++
Sbjct: 244 HGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEE 303
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFL 320
A+ + + M G P+ + YN+LI L +A +L EA + F+ EM + G+ P TY++ +
Sbjct: 304 ALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMI 363
Query: 321 DIIRTGEEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENG 375
+ + L +R++ C+P TY ++K + + ++ ++ ++++
Sbjct: 364 AMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHH 423
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D S+YT LIH L K E + + EM K + P KT LL D
Sbjct: 424 LSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLD 471
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 12/267 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+T ++ I K + D A I EM+G P +++ T+ I+ YC + +
Sbjct: 214 NTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTI---IQSYCRQSNFRKVY 270
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+ A + + ++ +L + + ++A + + V K + N
Sbjct: 271 ELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSV---GCKPDTLFYNALI 327
Query: 184 NIIGSS---REAERVW-MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+ +G + REA RV+ +EM + G+ + +++ +I+ + K L L +++
Sbjct: 328 HTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTF 387
Query: 240 -ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEA 297
+ D + Y V+ + K + + + M K ++ +V Y LI LC+A K +
Sbjct: 388 CKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWG 447
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIR 324
F+EM+ + I+P +T LD I+
Sbjct: 448 YNLFEEMVGKAITPRYKTCALLLDEIK 474
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 8/304 (2%)
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP----- 169
H V AI+A+ F F L+ ALC +K+V +AE L F K+V
Sbjct: 1 TAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCF-GKNVIGNGFSV 58
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
NTK N+IL GW + G + + W +M G+ D+ S+S + K+ K ++
Sbjct: 59 SNTKIHNLILRGWSKL-GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK 117
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L+ +MK ++ D YN VI A+ + V+ I + + M E+G PNV T+N++IK LC
Sbjct: 118 LYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC 177
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ ++ +A + DEM +RG P TY + E+ L M + G +P DTY+
Sbjct: 178 EDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYV 237
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
ML++KF RW V VW + E+G+ PD ++Y A+I AL G L+ A +Y EM E+
Sbjct: 238 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 297
Query: 410 QLLP 413
L P
Sbjct: 298 GLSP 301
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 184/391 (47%), Gaps = 11/391 (2%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+ LV+ VL + N A FF Y H + I I ++ T W+LI
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR GPS +T I+ RY + +A+ F + F +L L
Sbjct: 115 HRMRSLRIGPS---PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
C+ K V+ A L + F +T ++N+ILNGWC +I + +A V EM +RGI ++
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWC-LIKRTPKALEVLKEMVERGINPNL 230
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ ++ + +A + F +MK+ E D Y V+H +K A ++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M +GV P+V TYN++I+ LCK ++ A F+EM++RG P + TY+ + + GE
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 328 EVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
G L++ M GC+P TY M+I+ +S + ++ ++ P+ +Y
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 386 LIHALFLNGKLEE---AHQYYMEMKEKQLLP 413
LI +F+ + E+ A + +EM E+ +P
Sbjct: 411 LISGMFVRKRSEDMVVAGKLLLEMVERGFIP 441
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ + Y+ A K ++LF M G D +N ++ L K + V+ A L +++
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
+ + + VTYN ++ C ++ +A + EM++RGI+P + TY+ L R G+
Sbjct: 188 RGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ M+K C+ TY ++ F + V++E+ G P ++Y A+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I L +E A + EM + P T +L
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+++ R +D SF I ++ V L +M+ + I K + V A
Sbjct: 79 FLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 138
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
A+ L +M E G ++ ++N+++ LCK++++++A + F + R T+ T
Sbjct: 139 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-T 197
Query: 316 YHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ L+ +I+ + +L+ M + G P TY ++K F R Q + ++ + E+
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ D +YT ++H + G+++ A + EM + +LP T
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 224/463 (48%), Gaps = 20/463 (4%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S + + ++E GI+ S +LV + + + + F WA + G+ S + ++I L
Sbjct: 86 SSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVINSL 145
Query: 76 GKVRKFDTAWALI-DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF-- 132
K R+F+ AW+L+ D +R E G +LV+ T ++LIRRY V +AI AF + +
Sbjct: 146 CKAREFEIAWSLVFDRVRSDE-GSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEP 204
Query: 133 --KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN----TKSFNIILNGWCNII 186
K A ++ + LL ALC+ V++A + + + N + FNI+LNGW
Sbjct: 205 VCKSASELKLLEVLLDALCKEGYVREASVYLERRRGMMDSNWVPSVRIFNILLNGWFRS- 263
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
++AE++W EM + VV++ +I Y + R + + + ++MK +E V+
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEMKMAEMELTFMVF 323
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I L + + +A+ +M+ P +VTYNSL+K CKA L A + M+
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG+ PT TY+ F EE L + + G P TY +++K +
Sbjct: 384 RGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+V E+ G PD + T L+H L LEEA + + + ++P+ T +++ +
Sbjct: 444 AIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKMIDN 503
Query: 424 WSYNKQFVE--RQIASLKAHQPQSGQ--NT--RVISKKSDQDR 460
+K + ++++SL + P S + NT + D+DR
Sbjct: 504 GLRSKGMTDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDR 546
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 18/429 (4%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
S+ +M +++ G+ ++++LV+++L +R D + AF FF WA +Q Y+H R Y+ M
Sbjct: 97 SYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEM 156
Query: 72 IAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
I IL KV++F L+D M+ + + V + L ++R Y + + F
Sbjct: 157 IDILSSTRYKVKQFRIVCDLLDYMKRNDK--NTVPVEVLFGILRNYTDKYLT--CLQKFA 212
Query: 128 AYKR--FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNI 185
K+ K I F LL ALC+ V+DAE L+ K + ++NI+ GWC +
Sbjct: 213 KKKKVIVKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRV 272
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-- 243
R RV EM + G D +++ I+ + KA L + LF+ M+ G
Sbjct: 273 RNPGR-GMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPT 331
Query: 244 -KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
K Y +I AL +++ ++ M + G P+V TY +I+ +C A K+ EA +
Sbjct: 332 AKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLE 391
Query: 303 EMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM ++G P I TY+ FL ++ + ++ + M ++GC P+ TY MLI F
Sbjct: 392 EMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMN 451
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTD 418
F++W E+ G D SY +I LF K+ +A E+ K + LP K D
Sbjct: 452 DHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFD 511
Query: 419 ELLQDWSYN 427
L S N
Sbjct: 512 SFLMQLSVN 520
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 193/393 (49%), Gaps = 10/393 (2%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
I+ + +LV+ +L + ND A FF Y+H Y I I ++R + +
Sbjct: 63 IQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRS 122
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+ MR GP T +T I+ RY + RA+ F + +F ++ F +L
Sbjct: 123 LVYRMRSARLGP---TPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILD 179
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
LC+ K V+ A +L K F + S+N+++NGWC +I + +A + EM +RG+
Sbjct: 180 VLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWC-LIKRTNKALEMLKEMVKRGLTP 238
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++ S++ ++ Y +A +++ F +MK+ E D Y VIH +K A +
Sbjct: 239 NLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVF 298
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
+M +KGV P+V TYN+ I+ LCK +D A F+EM+ +G P TY+ + +
Sbjct: 299 DTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHR 358
Query: 327 EEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E+ +E M +M GC+P TY ++I+ F + ++ +++ P+ +Y
Sbjct: 359 GEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTY 418
Query: 384 TALIHALFLNGKLEE---AHQYYMEMKEKQLLP 413
LI A+F+ K ++ A +EM ++ +P
Sbjct: 419 NILISAMFVRKKSDDLLVAGNLLIEMVDRGFVP 451
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 4/215 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ I Y+ A H+ +++F M + G D + +N ++ L K + V+ A +L K
Sbjct: 138 TFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVF 197
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
+ K A + V+YN ++ C ++ ++A + EM++RG++P + +Y+ L R G+
Sbjct: 198 KGKFRA-DCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQI 256
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E + M+K C+ TY +I F + KV++ + + G P ++Y A
Sbjct: 257 NEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAF 316
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I L ++ A + EM K +P T L+
Sbjct: 317 IQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLV 351
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 18/429 (4%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
S+ +M +++ G+ ++++LV+++L +R D + AF FF WA +Q Y+H R Y+ M
Sbjct: 97 SYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEM 156
Query: 72 IAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
I IL KV++F L+D M+ + + V + L ++R Y + + F
Sbjct: 157 IDILSSTRYKVKQFRIVCDLLDYMKRNDK--NTVPVEVLFGILRNYTDKYLT--CLQKFA 212
Query: 128 AYKR--FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNI 185
K+ K I F LL ALC+ V+DAE L+ K + ++NI+ GWC +
Sbjct: 213 KKKKVIVKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRV 272
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-- 243
R RV EM + G D +++ I+ + KA L + LF+ M+ G
Sbjct: 273 RNPGR-GMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPT 331
Query: 244 -KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
K Y +I AL +++ ++ M + G P+V TY +I+ +C A K+ EA +
Sbjct: 332 AKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLE 391
Query: 303 EMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM ++G P I TY+ FL ++ + ++ + M ++GC P+ TY MLI F
Sbjct: 392 EMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMN 451
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTD 418
F++W E+ G D SY +I LF K+ +A E+ K + LP K D
Sbjct: 452 DHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFD 511
Query: 419 ELLQDWSYN 427
L S N
Sbjct: 512 SFLMQLSVN 520
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 185/374 (49%), Gaps = 29/374 (7%)
Query: 68 YHTMIAILGKVRKFDTAW-ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y ++ L + R+FD AW ++D G P ++ +L RRY A +A+ AF
Sbjct: 123 YDAVVDALARARQFDAAWRVVVDASADGAASP-----RSFAVLARRYVAAGMTRQAVRAF 177
Query: 127 YAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
+ F VG E +F LL LC+YK + A + K + N K + I++ GW
Sbjct: 178 DDMEAF---VGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYTILIYGW 234
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--C--------YSKARNLHKVLRLFD 232
C + + A + +M GI ++V+++ +++ C Y R +H +
Sbjct: 235 CKV-NRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLK 293
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M+ GIE D Y+ ++H ++ + + + +SM+++G+ P V TY S+IK L
Sbjct: 294 EMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCG 353
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG-----CQPTNDT 347
+L++A DEM+ G+ P+ TY+ F R +V G L+ KM P T
Sbjct: 354 RLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHT 413
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ F + + G+V +W+++ E+ GPD SYT LIH + K EA Q++MEM
Sbjct: 414 YNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMI 473
Query: 408 EKQLLPEPKTDELL 421
EK LP+ T E L
Sbjct: 474 EKGFLPQKITFETL 487
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 206/414 (49%), Gaps = 23/414 (5%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S+ + E++ + GI +S +L+ VL VR + F+ +A G+ HS+
Sbjct: 51 SNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSL 110
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
TM+ ILG+ RKFD W L+ E + + SL++ +T+ +++ R + V + + +F+
Sbjct: 111 DTMLYILGRNRKFDQIWELLIETKRKDR--SLISPRTMQVVLGRVAKLCSVRQTVESFWK 168
Query: 129 YKRFKFAVGIEDF------QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
+KR + DF LL LC+ K++ DA ++ K F + ++FNI+L+GW
Sbjct: 169 FKRL-----VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW 223
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
SS EAE + EM +G+ DVV+++ +I Y K R + K +L D+M+ D
Sbjct: 224 ----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 279
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y VI L A ++K M+E G P+V YN+ I+ C AR+L +A + D
Sbjct: 280 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD 339
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM+++G+SP TY+ F ++ ++ + L M C P + + LIK F R
Sbjct: 340 EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHE 399
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++W ++ G G L+ L K+EEA + +EM EK P
Sbjct: 400 KVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRP 453
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIEC---DRKVYNAVIHALAKGRLVKDAISLM 266
SFS Y RN R FDQ+ + IE DR + + + GR+ K S+
Sbjct: 107 SFSLDTMLYILGRN-----RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK-LCSVR 160
Query: 267 KSMEE----KGVAPN---VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+++E K + P+ +N+L++ LC+ + + +AR + L+ P ++T++
Sbjct: 161 QTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNIL 219
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L ++ EE E M+ G +P TY LI + + R+ +K+ +++ E PD
Sbjct: 220 LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 279
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+YT +I L L G+ ++A + EMKE P+
Sbjct: 280 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD 314
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 17/255 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL---LILIRRY 113
K G Y+++I + K R+ + A+ LID+MR E P ++T T+ L LI +
Sbjct: 237 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 296
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
+V + + + Y + + + C + + DA+ L+ K + P N
Sbjct: 297 DKAREVLKEMKEYGCYP------DVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP-N 349
Query: 172 TKSFNIILN--GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++N+ N +G S E +++ M + S +I + + + +R
Sbjct: 350 ATTYNLFFRVLSLANDLGRSWE---LYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMR 406
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L++ M G V + ++ L V++A + M EKG P+ V++ + +
Sbjct: 407 LWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLME 466
Query: 290 KARKLDEARQAFDEM 304
A K DE +M
Sbjct: 467 LANKHDEVNNLIQKM 481
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 206/414 (49%), Gaps = 23/414 (5%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREY 68
S+ + E++ + GI +S +L+ VL VR + F+ +A G+ HS+
Sbjct: 52 SNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSL 111
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
TM+ ILG+ RKFD W L+ E + + SL++ +T+ +++ R + V + + +F+
Sbjct: 112 DTMLYILGRNRKFDQIWELLIETKRKDR--SLISPRTMQVVLGRVAKLCSVRQTVESFWK 169
Query: 129 YKRFKFAVGIEDF------QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
+KR + DF LL LC+ K++ DA ++ K F + ++FNI+L+GW
Sbjct: 170 FKRL-----VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW 224
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
SS EAE + EM +G+ DVV+++ +I Y K R + K +L D+M+ D
Sbjct: 225 ----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 280
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y VI L A ++K M+E G P+V YN+ I+ C AR+L +A + D
Sbjct: 281 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD 340
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM+++G+SP TY+ F ++ ++ + L M C P + + LIK F R
Sbjct: 341 EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHE 400
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++W ++ G G L+ L K+EEA + +EM EK P
Sbjct: 401 KVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRP 454
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIEC---DRKVYNAVIHALAKGRLVKDAISLM 266
SFS Y RN R FDQ+ + IE DR + + + GR+ K S+
Sbjct: 108 SFSLDTMLYILGRN-----RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK-LCSVR 161
Query: 267 KSMEE----KGVAPN---VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+++E K + P+ +N+L++ LC+ + + +AR + L+ P ++T++
Sbjct: 162 QTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNIL 220
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L ++ EE E M+ G +P TY LI + + R+ +K+ +++ E PD
Sbjct: 221 LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 280
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+YT +I L L G+ ++A + EMKE P+
Sbjct: 281 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD 315
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 17/255 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL---LILIRRY 113
K G Y+++I + K R+ + A+ LID+MR E P ++T T+ L LI +
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
+V + + + Y + + + C + + DA+ L+ K + P N
Sbjct: 298 DKAREVLKEMKEYGCYP------DVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP-N 350
Query: 172 TKSFNIILN--GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++N+ N +G S E +++ M + S +I + + + +R
Sbjct: 351 ATTYNLFFRVLSLANDLGRSWE---LYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMR 407
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L++ M G V + ++ L V++A + M EKG P+ V++ + +
Sbjct: 408 LWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLME 467
Query: 290 KARKLDEARQAFDEM 304
A K DE +M
Sbjct: 468 LANKHDEVNNLIQKM 482
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 45/399 (11%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++EC + +S LV VL ++ + AF FF WAG+++G+ H++R Y+ M+++LG+
Sbjct: 177 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 236
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F++ ++ EM GE G L+T +T I I+ + A + +A+ F KR+ F G
Sbjct: 237 TRQFESMMGMLGEM--GEKG--LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAG 292
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ LL L R K ++A+ L +D F N +++ ++LNGWC I
Sbjct: 293 VDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRI------------ 340
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+NL + R +++M G + D ++ ++ L K +
Sbjct: 341 ------------------------KNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCK 376
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
DAI L + M+ KG +PNV TY LI+ LCK K+ EA + FDEM+ G P Y
Sbjct: 377 KKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYT 436
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + ++V+ LL+ M++ GC TY LIK + + + +++ ++ +N
Sbjct: 437 CLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQN 496
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYME--MKEKQL 411
G +Y ++ + F E +E MK QL
Sbjct: 497 GIQSTLHTYNMMMKSYFYTRNYEMGCAEMIEKGMKAPQL 535
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC-----RYKNVQDAEHLMFC---NKDV 167
V V R I+ +A R AV E L AL R+K+ + FC K
Sbjct: 160 VSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAG 219
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F N++++N +++ ++G +R+ E + EM ++G+ + +FS I ++ A+
Sbjct: 220 FTHNSRTYNAMMS----VLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKER 274
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + +F+ MKR + N ++ L + +L K+A +L + +E++ PN+ TY L
Sbjct: 275 KKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVL 333
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+ C+ + L EA + ++EM+ +G P I +H L+ + + + L E M+ G
Sbjct: 334 LNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGP 393
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI+ + + + ++E+ ++G PD + YT LI K+++ +
Sbjct: 394 SPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYA 453
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMKEK + +T L N+Q + +
Sbjct: 454 LLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAV 487
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 8/373 (2%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+ LV+ VL + N A FF Y H + I I ++ T W+LI
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR GPS +T I+ RY + +A+ F + F +L L
Sbjct: 115 HRMRSLRIGPS---PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
C+ K V+ A L + F +T ++N+ILNGWC +I + +A V EM +RGI ++
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWC-LIKRTPKALEVLKEMVERGINPNL 230
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ ++ + +A + F +MK+ E D Y V+H +K A ++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M +GV P+V TYN++I+ LCK ++ A F+EM++RG P + TY+ + + GE
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 328 EVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
G L++ M GC+P TY M+I+ +S + ++ ++ P+ +Y
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 386 LIHALFLNGKLEE 398
LI +F+ + E+
Sbjct: 411 LISGMFVRKRSED 423
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ + Y+ A K ++LF M G D +N ++ L K + V+ A L +++
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
+ + + VTYN ++ C ++ +A + EM++RGI+P + TY+ L R G+
Sbjct: 188 RGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ M+K C+ TY ++ F + V++E+ G P ++Y A+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I L +E A + EM + P T +L
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+++ R +D SF I ++ V L +M+ + I K + V A
Sbjct: 79 FLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 138
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
A+ L +M E G ++ ++N+++ LCK++++++A + F + R T+ T
Sbjct: 139 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-T 197
Query: 316 YHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ L+ +I+ + +L+ M + G P TY ++K F R Q + ++ + E+
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ D +YT ++H + G+++ A + EM + +LP T
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 8/373 (2%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+ LV+ VL + N A FF Y H + I I ++ T W+LI
Sbjct: 49 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 108
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR GPS +T I+ RY + +A+ F + F +L L
Sbjct: 109 HRMRSLRIGPS---PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 165
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
C+ K V+ A L + F +T ++N+ILNGWC I + + E V EM +RGI ++
Sbjct: 166 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLE-VLKEMVERGINPNL 224
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ ++ + +A + F +MK+ E D Y V+H +K A ++
Sbjct: 225 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 284
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M +GV P+V TYN++I+ LCK ++ A F+EM++RG P + TY+ + + GE
Sbjct: 285 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 344
Query: 328 EVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
G L++ M GC+P TY M+I+ +S + ++ ++ P+ +Y
Sbjct: 345 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 404
Query: 386 LIHALFLNGKLEE 398
LI +F+ + E+
Sbjct: 405 LISGMFVRKRSED 417
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ + Y+ A K ++LF M G D +N ++ L K + V+ A L +++
Sbjct: 122 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 181
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
+ + + VTYN ++ C ++ + + EM++RGI+P + TY+ L R G+
Sbjct: 182 RGR-FSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 240
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ M+K C+ TY ++ F + V++E+ G P ++Y A+
Sbjct: 241 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 300
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I L +E A + EM + P T +L
Sbjct: 301 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 335
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+++ R +D SF I ++ V L +M+ + I K + V A
Sbjct: 73 FLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 132
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
A+ L +M E G ++ ++N+++ LCK++++++A + F + R T+ T
Sbjct: 133 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-T 191
Query: 316 YHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ L+ +I+ + +L+ M + G P TY ++K F R Q + ++ + E+
Sbjct: 192 YNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 251
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ D +YT ++H + G+++ A + EM + +LP T
Sbjct: 252 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 296
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 194/398 (48%), Gaps = 10/398 (2%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL ++ ++ FF WA G+ H+T Y M+ ILGK R+F+ A+I EM
Sbjct: 198 VVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEM- 256
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G+ G ++ + I+ + A ++ A+ F K+ F G+E F LL AL
Sbjct: 257 -GKVG--ALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEG 313
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
++A + + + +S+ ++ WCN + EA RVW EM ++G+ DVV +
Sbjct: 314 LGREARQVFDKMHGQYSPDLRSYTALMLAWCNAR-NLVEAGRVWNEMLEKGMKPDVVVHN 372
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + + + L++F+ MK G + Y +I K + A+ + M+E
Sbjct: 373 TMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEA 432
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
P+V TY L+ A+++D +EM Q+G P RTY+A + ++ + ++
Sbjct: 433 RCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDA 492
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + M K G +PT TY M++K F R + VW E+ G PD +SYT I+
Sbjct: 493 ARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFIN 552
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLL-PEPKTDELLQDWS 425
+G+ EEA++Y EM K + P+ ++ D+S
Sbjct: 553 GHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFS 590
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 144 LLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWM 197
+L+ L R+K+ + F F T ++ +L+ I+G +R+ E +
Sbjct: 199 VLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLH----ILGKTRQFEMMVAIIQ 254
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + G + +F I ++ A + + +F+ MK+ G + + +N ++ ALA
Sbjct: 255 EMGKVG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEG 313
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
L ++A + M + +P++ +Y +L+ C AR L EA + ++EML++G+ P + ++
Sbjct: 314 LGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHN 372
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
++ GLL R+ K++ + G
Sbjct: 373 TMIE---------GLLRGQRR-----------------------PEALKMFELMKAKGPP 400
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
P+ +YT LI GK++ A + + EM+E + P+ T L N + ++R A
Sbjct: 401 PNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAV 460
Query: 438 LK 439
L+
Sbjct: 461 LE 462
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 10/398 (2%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL ++ ++ FF WA G+ H+T Y M+ ILGK R+F++ AL+ EM
Sbjct: 194 VVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEM- 252
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G+ G ++ + I+ + A ++ A+ F ++ F G+E F LL AL
Sbjct: 253 -GKAG--TLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEG 309
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
++A + + + +S+ ++ WCN + EA RVW EM ++G+ DVV +
Sbjct: 310 LGREARQVFDKMLGQYSPDLRSYTALMLAWCNA-RNLVEAGRVWNEMLEKGMKPDVVVHN 368
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + + H+ +++F+ MK G + Y +I K + A+ + M+E
Sbjct: 369 TMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEA 428
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
P+V TY L+ A+++D +EM Q+G P RTY+A + ++ + ++
Sbjct: 429 RCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDA 488
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + M K G PT TY M++K F R + VW E+ G PD +SYT I
Sbjct: 489 ARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFIS 548
Query: 389 ALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
+G+ EEA++Y EM K + P+ ++ D S
Sbjct: 549 GHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLS 586
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 13/244 (5%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G + +++ ++ K R ++ L +M + G + I + A +K+A
Sbjct: 221 GFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGT-LSMDAFKVAIKSFAAAGEIKNA 279
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-- 320
+ + + M + G V ++N L+ L EARQ FD+ML + SP +R+Y A +
Sbjct: 280 VGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTALMLA 338
Query: 321 -----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+++ G + M + G +P + +I+ R ++ K++ + G
Sbjct: 339 WCNARNLVEAGR----VWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKG 394
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
P+ +YT LI GK++ A + + EM+E + P+ T L N + ++R
Sbjct: 395 PPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVT 454
Query: 436 ASLK 439
A L+
Sbjct: 455 AVLE 458
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 8/403 (1%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
+S + + EC + +S ++V+EVL+ EA FF WA KQ + Y+ +I
Sbjct: 117 KSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRA 176
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FK 133
LG+ + D + E+R G S+ +T I+I V +AI F + F
Sbjct: 177 LGRRKFIDFMVKFLHELR--VEGVSM-NSETFSIVIDSLVRARRVYKAIQMFGNLEEEFG 233
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F E LL LCR +V A K PFN ++N+I+ GW G E +
Sbjct: 234 FERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKF-GRVSEMQ 292
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
RV+ EM + G D +SFS ++ +A + + +F M+ G D VYNA+I
Sbjct: 293 RVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNF 352
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ + + + K PN+ TY +I L KA K+ +A + FDEML RG+
Sbjct: 353 ISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKT 412
Query: 314 RTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
T +F++ + + + RK+GC+ + Y +L+ + SR+ + G + K+W+E
Sbjct: 413 GTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDE 472
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ E+G D Y LI L G+ E A E K P
Sbjct: 473 MQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCP 515
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 15/228 (6%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ Q I DV S++ +I + + + +++ +++ G+ + + ++ VI +L + R
Sbjct: 158 IKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARR 217
Query: 259 VKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP-TIRTY 316
V AI + ++EE+ G + + N L++ LC+ + A F+ + +G P TY
Sbjct: 218 VYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSV--KGKIPFNCMTY 275
Query: 317 HAFLDIIRTGEEVFG-------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
++I G FG + E M + G P ++ L++ R + + ++
Sbjct: 276 ----NVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFG 331
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ E G PD + Y A+I G +E +YY + K P T
Sbjct: 332 SMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDT 379
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 100/249 (40%), Gaps = 11/249 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K + + +EM P ++ LL + R + D A+ F
Sbjct: 275 YNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIED---AVMIFG 331
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNI 185
+ + + ++S N + C +K+ P N ++ +++G +
Sbjct: 332 SMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDP-NIDTYTRMISG---L 387
Query: 186 IGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I +S+ A+ + M EM RG+ + + I H + ++ + +++G +
Sbjct: 388 IKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISL 447
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y ++ L++ + + M+E G + ++ Y LI LC + + A +E
Sbjct: 448 SAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEE 507
Query: 304 MLQRGISPT 312
+++G P+
Sbjct: 508 SMRKGFCPS 516
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 10/398 (2%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL ++ ++ FF WA G+ H+T Y M+ ILGK R+F++ A+I EM
Sbjct: 196 VVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEM- 254
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G+ G ++ + I+ + A ++ A+ F ++ F G+E F LL AL +
Sbjct: 255 -GKAG--ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEG 311
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
++A + + + +S+ ++ WCN + EA RVW EM ++G+ DVV +
Sbjct: 312 LGREARQVFDKMHGQYSPDLRSYTALMLAWCN-ARNLVEAGRVWNEMLEKGMDPDVVVHN 370
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + + + +++F+ MK G + Y +I K + A+ + M+E
Sbjct: 371 TMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEA 430
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEV 329
P+V TY L+ A+++D +EM Q+G P RTY+A + ++ ++
Sbjct: 431 KCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDA 490
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + M K G +PT TY M++K F + VW E+ + G PD +SYT I+
Sbjct: 491 ARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFIN 550
Query: 389 ALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
+G+ EEA++Y EM K + P+ ++ D+S
Sbjct: 551 GHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFS 588
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 184 NIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I+G +R+ E + EM + G + +F I ++ A + + +F+ M++ G +
Sbjct: 236 HILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFD 294
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ +N ++ ALAK L ++A + M + +P++ +Y +L+ C AR L EA +
Sbjct: 295 DGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNLVEAGRV 353
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++EML++G+ P + ++ ++ GLL R+ +K F +
Sbjct: 354 WNEMLEKGMDPDVVVHNTMIE---------GLLRGQRRPEA----------VKMFELMKA 394
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
G VW +YT LI GK++ A + + EM+E + P+ T
Sbjct: 395 KGPPPNVW-------------TYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTC 441
Query: 421 LQDWSYNKQFVERQIASLK 439
L N + ++R A L+
Sbjct: 442 LLVGYGNAKQMDRVTAVLE 460
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 182/400 (45%), Gaps = 17/400 (4%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
FF WA Q G+ S Y+ M+ G+V FD AW ID M+ VT +T L
Sbjct: 77 VLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVD---VTVETFL 133
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
IL+RRY AI+AF + + F L+S LCR + A+ KD
Sbjct: 134 ILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK 193
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + ++ GWC G+ EAERV+ EM GI +V ++S +I + + +
Sbjct: 194 FEPDVIVYTNLVRGWCR-AGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRA 252
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F +M G + + YN+++ K + + + M+ G P+ VTYN LI+
Sbjct: 253 HDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIET 312
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPT 344
CK L++A + M ++G +P T++ I +V + + M+++ C+
Sbjct: 313 HCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEAN 372
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY L+K F + V K+ E+ EN P+ ++Y LI G A++++
Sbjct: 373 TVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFR 432
Query: 405 EM-KEKQLLPE-PKTDELLQDWSYNKQFVERQIASLKAHQ 442
EM EK L P P D +LQ R+ LK H+
Sbjct: 433 EMIDEKCLRPSLPVYDMVLQQL--------RKAGQLKKHE 464
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 10/398 (2%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL ++ ++ FF WA G+ H+T Y M+ ILGK R+F++ A+I EM
Sbjct: 196 VVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEM- 254
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G+ G ++ + I+ + A ++ A+ F ++ F G+E F LL AL +
Sbjct: 255 -GKAG--ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEG 311
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
++A + + + +S+ ++ WCN + EA RVW EM ++G+ DVV +
Sbjct: 312 LGREARQVFDKMHGQYSPDLRSYTALMLAWCN-ARNLVEAGRVWNEMLEKGMDPDVVVHN 370
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + + + +++F+ MK G + Y +I K + A+ + M+E
Sbjct: 371 TMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEA 430
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEV 329
P+V TY L+ A+++D +EM Q+G P RTY+A + ++ ++
Sbjct: 431 KCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDA 490
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + M K G +PT TY M++K F + VW E+ + G PD +SYT I+
Sbjct: 491 ARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFIN 550
Query: 389 ALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
+G+ EEA++Y EM K + P+ ++ D+S
Sbjct: 551 RHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFS 588
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 184 NIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I+G +R+ E + EM + G + +F I ++ A + + +F+ M++ G +
Sbjct: 236 HILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFD 294
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ +N ++ ALAK L ++A + M + +P++ +Y +L+ C AR L EA +
Sbjct: 295 DGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNLVEAGRV 353
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++EML++G+ P + ++ ++ GLL R+ +K F +
Sbjct: 354 WNEMLEKGMDPDVVVHNTMIE---------GLLRGQRRPEA----------VKMFELMKA 394
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
G VW +YT LI GK++ A + + EM+E + P+ T
Sbjct: 395 KGPPPNVW-------------TYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTC 441
Query: 421 LQDWSYNKQFVERQIASLK 439
L N + ++R A L+
Sbjct: 442 LLVGYGNAKQMDRVTAVLE 460
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 14/406 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGK----QSGYAHSTREYHTMIAILGKVRKFDTA 84
+S LV VL ++ + FF WA G+AH+T Y M+ ILGK R+F +
Sbjct: 181 LSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSM 240
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
ALI EM G+ G + I I+ + A ++ A+ F + F G+E F L
Sbjct: 241 VALIQEM--GKEG--ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCL 296
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L AL + ++A + +D + + +S+ ++ WCN + EA RVW EM + G+
Sbjct: 297 LVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCN-ARNLVEAGRVWNEMLENGL 355
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
DVV + +I + + + +++F+ MK G + Y +I K + A+
Sbjct: 356 KPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+ M++ G P+V TY L+ A+++D +EM Q+G P RTY+A + ++
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Query: 325 T---GEEVFGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDR 380
++ + + M K G +PT TY M++K F R + VW E+ G PD
Sbjct: 476 NRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDV 535
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
+SYT I+ +G+ EEA +Y EM +K + P+ ++ D+S
Sbjct: 536 NSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFS 581
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 42/303 (13%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER---VWM 197
+L+ L R+K+ H F + F +C +I+G +R+ + +
Sbjct: 186 VLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQ 245
Query: 198 EMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + G +C D +F I ++ A + + +F+ M+ G + + +N ++ ALA+
Sbjct: 246 EMGKEGALCMD--AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQE 303
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
L ++A + M ++ AP++ +Y +L+ C AR L EA + ++EML+ G+ P + +
Sbjct: 304 GLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVH 362
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ ++ GLL R+ K++ + G
Sbjct: 363 NTMIE---------GLLRGQRR-----------------------PEAVKMFELMKAKGP 390
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
P+ +YT LI GK++ A + + EM++ P+ T L N + ++R A
Sbjct: 391 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTA 450
Query: 437 SLK 439
L+
Sbjct: 451 LLE 453
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 196/412 (47%), Gaps = 15/412 (3%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S + + + GIK + L+ V + + + +LWA Q G+ + + ++I L
Sbjct: 89 SSLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINAL 148
Query: 76 GKVRKFDTAWALI--DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
K+++FD AW+L+ R + LV+ T I+IRRY AI F K K
Sbjct: 149 AKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKK 208
Query: 134 FAVG----IEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNI 185
V + F+ L+ +LC+ + ++A + K+ P + + +NI+LNGW
Sbjct: 209 SIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVP-SIRVYNIMLNGWFRA 267
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ AER+W EM + VV++ ++ Y + R + K L + +M + GI+ + V
Sbjct: 268 -RKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIV 326
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I ALA+ K+A+ +M+ + P + TYNSL+K CKA ++ A + +M+
Sbjct: 327 YNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMI 386
Query: 306 QRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG P TY+ F R G +E L M + G P TY +++K +
Sbjct: 387 SRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLE 446
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+V E+ G D ++ T L H L KLEEA + +M + ++P+
Sbjct: 447 LAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQ 498
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 114/285 (40%), Gaps = 50/285 (17%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S R Y+ M+ + RK A L +EM+ PS+VT TL + YC + V
Sbjct: 249 GWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTL---VEGYCRMRRV 305
Query: 120 GRA----------------------INAFYAYKRFKFAVG-------------IEDFQGL 144
+A I+A RFK A+G + + L
Sbjct: 306 EKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSL 365
Query: 145 LSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ C+ +++ A ++ ++ P T ++N + + G E ++ +M +
Sbjct: 366 VKGFCKAGDIEGASKILKKMISRGFLPIPT-TYNYFFR-YFSRCGKVDEGMNLYTKMIES 423
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G D +++ ++ + L +++ +M+ G + D + H L K +++A
Sbjct: 424 GHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEA 483
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+ + M +G+ P +T+ L ++ +Q +EM ++
Sbjct: 484 FAEFEDMIRRGIIPQYLTFQKL--------NVELKKQGMNEMARK 520
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 14/406 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGK----QSGYAHSTREYHTMIAILGKVRKFDTA 84
+S LV VL ++ + FF WA G+AH+T Y M+ ILGK R+F +
Sbjct: 181 LSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSM 240
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
ALI EM G+ G + I I+ + A ++ A+ F + F G+E F L
Sbjct: 241 VALIQEM--GKEG--ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCL 296
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L AL + ++A + +D + + +S+ ++ WCN + EA RVW EM + G+
Sbjct: 297 LVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCN-ARNLVEAGRVWNEMLENGL 355
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
DVV + +I + + + +++F+ MK G + Y +I K + A+
Sbjct: 356 KPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR 415
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+ M++ G P+V TY L+ A+++D +EM Q+G P RTY+A + ++
Sbjct: 416 CFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Query: 325 T---GEEVFGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDR 380
++ + + M K G +PT TY M++K F R + VW E+ G PD
Sbjct: 476 NRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDV 535
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
+SYT I+ +G+ EEA +Y EM +K + P+ ++ D+S
Sbjct: 536 NSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFS 581
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 132/303 (43%), Gaps = 42/303 (13%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAER---VWM 197
+L+ L R+K+ H F + F +C +I+G +R+ + +
Sbjct: 186 VLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQ 245
Query: 198 EMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + G +C D +F I ++ A + + +F+ M+ G + + +N ++ ALA+
Sbjct: 246 EMGKEGALCMD--AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQE 303
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
L ++A + M ++ AP++ +Y +L+ C AR L EA + ++EML+ G+ P + +
Sbjct: 304 GLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVH 362
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ ++ GLL R+ K++ + G
Sbjct: 363 NTMIE---------GLLRGQRR-----------------------PEAVKMFELMKAKGP 390
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
P+ +YT LI GK++ A + + EM++ P+ T L N + ++R A
Sbjct: 391 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTA 450
Query: 437 SLK 439
L+
Sbjct: 451 LLE 453
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 21/404 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + + +SS L+ V+ R D A + A + G A S T +
Sbjct: 58 SAMESALAASAVPLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGVAPSPYAIDTAL 117
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ R P VT +T +I++ R V V + +F R
Sbjct: 118 YVLGRARRFPHMWDLLATTR--RICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRLARM 175
Query: 133 KFAVGIED-FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
AV F LL LC+ K++ DA ++ K F N +FNI+L+GW S+ +
Sbjct: 176 FHAVDPACLFNALLRTLCQEKSMSDARNVFHALKYDFRVNRHTFNILLSGW----KSAED 231
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE EM + G+ D+V+++ +I C+ K R++ K +L D+M+ I D Y ++I
Sbjct: 232 AEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLIG 291
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L A L+K M E G +P+V YN+ I+ A++L +A D+M +G+ P
Sbjct: 292 GLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMP 351
Query: 312 TIRTYHAF-------LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
TY+ F DI T + L E MR GC P + + +I+ R+ + G
Sbjct: 352 NPTTYNLFFRCYYWAFDIGST----WRLYERMRSEGCFPNTQSCMFIIRLCHRYGKVGQA 407
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++W+++ N G L L GKLEE + + +M E
Sbjct: 408 LELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVE 451
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 12/245 (4%)
Query: 185 IIGSSREAERVW-MEMSQRGICYDVVSFSC---IISCYSKARNLHKVLRLFDQMKRMGIE 240
++G +R +W + + R IC D V+ ++ +K ++H+ + F ++ RM
Sbjct: 119 VLGRARRFPHMWDLLATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRLARMFHA 178
Query: 241 CDRK-VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D ++NA++ L + + + DA ++ +++ N T+N L L + ++A
Sbjct: 179 VDPACLFNALLRTLCQEKSMSDARNVFHALKYD-FRVNRHTFNIL---LSGWKSAEDAEA 234
Query: 300 AFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
EM + G+ P + TY++ +D R E+ + LL+ MR+ P TY LI
Sbjct: 235 FVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLIGGLG 294
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
Q + E+ E G PD +Y A I + +L +A +M K L+P P
Sbjct: 295 LIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMPNPT 354
Query: 417 TDELL 421
T L
Sbjct: 355 TYNLF 359
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 190/403 (47%), Gaps = 15/403 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
I+VS++LV ++L ++DW++A F WAG + GY H Y M+ ILGK+++ D
Sbjct: 36 IEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMRE 95
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L++EM LVT T+ +RR+ A+ F F E LL
Sbjct: 96 LLEEMNRNH----LVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLD 151
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGI 204
LC+ V+ A + K N +FNI ++GWC N++ EA EM
Sbjct: 152 TLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVD---EAHWTLQEMKGHAF 208
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V+S+S II Y + N KV L D+M+ G + Y +I LAK + ++A+
Sbjct: 209 RPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQ 268
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII 323
L + M+ G P+ +NSLI L +A + EA F+ EM G+S TY++ + ++
Sbjct: 269 LTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAML 328
Query: 324 RTGEEVFGLLESMRKMGCQPT----NDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGP 378
V L +R+M T+ L+K R + ++ ++ + ++
Sbjct: 329 CHHGHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSL 388
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
DRS+Y LIH L K + A+ + EM K ++P+ +T +L
Sbjct: 389 DRSAYALLIHGLCRANKCQWAYHLFEEMISKDIVPKYQTCHML 431
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 28/251 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I + F + L+DEM P++VT T+++ + + + A
Sbjct: 215 YSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEE------ALQ 268
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVF---------PFNTKSF 175
+R K A D F L+ L R Q+A DVF +T ++
Sbjct: 269 LTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEA-------VDVFEKEMPNAGVSRDTSTY 321
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
N ++ C+ G +A + EM D +F ++ + +++ + +L D M
Sbjct: 322 NSMIAMLCHH-GHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDM 380
Query: 235 -KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
K+ + DR Y +IH L + + A L + M K + P T + L++ +
Sbjct: 381 VKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFEEMISKDIVPKYQTCHMLLEEVKLKSM 440
Query: 294 LDEARQAFDEM 304
D A + D M
Sbjct: 441 YDTAEKIEDFM 451
>gi|125549949|gb|EAY95771.1| hypothetical protein OsI_17645 [Oryza sativa Indica Group]
Length = 240
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 119/220 (54%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG+ D+ S+S + +K+ K ++F +MK+ G+ D YN IH++ +
Sbjct: 1 MDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQG 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V AI L + M + G PN T+N+++K LCK + E +M + GI P + TYH
Sbjct: 61 VDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHC 120
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
F + +EV GL E M + GC P DTY+MLIK+F RW VF VW + E G P
Sbjct: 121 FFQYLSRPQEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSP 180
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
D +Y +LI AL G ++ A +Y EM K L P+P+ +
Sbjct: 181 DAFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRKE 220
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 5/314 (1%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKD 166
ILIR +CA ++ + F +R + + + ++ A C+ K + +A L+ +
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
N ++N+++NG C + G E V EM ++G D V+++ +++ Y K N H+
Sbjct: 268 GLEPNLLTYNMVINGLCRV-GRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L L +M R G+ D Y ++I+ + K + A+ M +G+ PN VTY SLI
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQP 343
+ +DEA + +DEM++ G PTI TY+A L+ + EE GLL M G P
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+Y +I F R+++ F++ E+ E G PD +Y++LI L +L EA +
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 404 MEMKEKQLLPEPKT 417
EM K LLP+ T
Sbjct: 507 QEMLNKSLLPDEFT 520
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 182/407 (44%), Gaps = 44/407 (10%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG + + Y+ +I + +EM P++VT T+ I YC +
Sbjct: 197 SGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTV---IGAYCKLKR 253
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+ A + + + +++ LCR +++ ++ ++ F + ++N
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+C + G+ +A + EM + G+ DVV+++ +I+ KA NL++ + FDQM
Sbjct: 314 LVNGYCKV-GNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372
Query: 238 GIECDRKVYNAVIH-------------------------------ALAKGRLV----KDA 262
G+ + Y ++I+ AL G V ++A
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
I L++ ME KG++P+VV+Y+++I C+ ++LD A Q EM+++G+SP TY + +
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492
Query: 323 I---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ R E L + M P TY LI + + + +E+ + G PD
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWS 425
+Y LI+ L + EA + +++ + +P T D L++ S
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCS 599
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 29/380 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+A Y+T++ KV F A L EM P +VT +L I C ++
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSL---INTMCKAGNL 359
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFN 176
RA+ F + L++ + + +A + M + FP ++N
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI--RSGFPPTIVTYN 417
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+LNG C + G EA + M +G+ DVVS+S II+ + + + L + ++ +M
Sbjct: 418 ALLNGHC-VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVE 476
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y+++I L + R + +A L + M K + P+ TY SLI CK L+E
Sbjct: 477 KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNE 536
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTY---- 348
A DEM+++G P TY+ ++ + RT E LL+ P TY
Sbjct: 537 ALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI-PNGITYDTLI 595
Query: 349 -----------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ LIK F +V+ + + P+ + Y +IH +G +
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVH 655
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
+AH+ Y EM + +P T
Sbjct: 656 KAHKLYKEMVDFGFIPHTVT 675
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%), Gaps = 49/312 (15%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S+N IL+ AE+V+ EM G+ +V S++ +I + A NL LR F++
Sbjct: 169 SYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEE 228
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+R + YN VI A K + + +A L++SM +G+ PN++TYN +I LC+ +
Sbjct: 229 MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR 288
Query: 294 LDEA--------RQAF---------------------------DEMLQRGISPTIRTYHA 318
++E R+ F EML+ G+ P + TY +
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348
Query: 319 FLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + + G + M G +P TY LI FS+ +++W+E+ +G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP-----------KTDELLQDW 424
P +Y AL++ ++G++EEA M+ K L P+ + EL + +
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468
Query: 425 SYNKQFVERQIA 436
N + VE+ ++
Sbjct: 469 QMNAEMVEKGVS 480
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 168/370 (45%), Gaps = 33/370 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L +V + + ++ EM P VT TL + YC V + +A+
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL---VNGYCKVGNFHQALVLHS 332
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQ------DAEHLMFCNKDVFPFNTKSFNIILNG 181
R + + L++ +C+ N+ D H+ + + P N ++ ++NG
Sbjct: 333 EMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV----RGLRP-NGVTYTSLING 387
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ G EA R+W EM + G +V+++ +++ + + + + + L M+ G+
Sbjct: 388 FSQK-GFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y+ +I + + + A + M EKGV+P+ +TY+SLI+ LC+ R+L+EA F
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI---KKF 355
EML + + P TY + ++ + G+ E L + M K G P TY +LI K
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566
Query: 356 SRWRQFGNVF--KVWNEISENGNGPDR----------SSYTALIHALFLNGKLEEAHQYY 403
+R R+ + ++E NG D S ALI + G + EA Q +
Sbjct: 567 ARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVF 626
Query: 404 MEMKEKQLLP 413
M ++ P
Sbjct: 627 ESMIKRNQKP 636
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 41/313 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y T+IA + ++ D A+ + EM P +T +L I+ C +
Sbjct: 443 GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL---IQGLCEQRRL 499
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F + L++ C+ ++ +A +L K P +T ++N+
Sbjct: 500 NEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP-DTVTYNV 558
Query: 178 ILNGWCNIIGSSREAERVWM-----EMSQRGICYDVVSFSC----------IISCYSKAR 222
++NG N +REA+R+ + E GI YD + SC +I +
Sbjct: 559 LINGL-NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+++ ++F+ M + + + VYN +IH + V A L K M + G P+ VT
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTII 677
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRT--------YHAFLDII-RTG--EEVFG 331
+L+K L + DE L I +R+ A + I + G + VF
Sbjct: 678 ALVKAL--------YSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFN 729
Query: 332 LLESMRKMGCQPT 344
LL M K G P+
Sbjct: 730 LLTEMAKDGFLPS 742
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 173/373 (46%), Gaps = 8/373 (2%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+ LV+ VL + N A FF Y H + I I ++ T W+LI
Sbjct: 53 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLI 112
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
MR GPS +T I+ RY + +A+ F + F +L L
Sbjct: 113 HRMRSLRIGPS---PKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 169
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
C+ K V+ A L + F +T ++N+I+NGWC +I + +A V EM RGI ++
Sbjct: 170 CKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWC-LIKRTPKALEVLKEMVDRGINPNL 228
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ ++ + +A + + F +MK+ E D Y V+H +K ++
Sbjct: 229 TTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDE 288
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M +GV P+V TYN+ I+ LCK ++ A F+EM+++G P + TY+ + + G+
Sbjct: 289 MIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGK 348
Query: 328 EVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
G L++ M GC+P TY M+I+ +S + ++ ++ P+ +Y
Sbjct: 349 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNI 408
Query: 386 LIHALFLNGKLEE 398
LI +F+ + E+
Sbjct: 409 LISGMFVRKRSED 421
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 5/252 (1%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
K+F I+ + + G +A ++++ M + G D+ SF+ I+ K++ + K LF
Sbjct: 125 KTFAIVAERYASS-GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 183
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ R D YN +++ + A+ ++K M ++G+ PN+ TYN++++ +A
Sbjct: 184 AL-RGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAG 242
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYI 349
++ +A + F EM +R + TY + E+ + + M + G P+ TY
Sbjct: 243 QIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYN 302
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
I+ + N ++ E+ G P+ ++Y LI LF GK + M+ +
Sbjct: 303 AFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENE 362
Query: 410 QLLPEPKTDELL 421
P +T ++
Sbjct: 363 GCEPNFQTYNMM 374
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+++ R +D SF I ++ V L +M+ + I K + V A
Sbjct: 77 FLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 136
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
A+ L +M E G ++ ++N+++ LCK++++++A + F + R + T+ T
Sbjct: 137 SGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTV-T 195
Query: 316 YHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ ++ +I+ + +L+ M G P TY +++ F R Q ++ + E+
Sbjct: 196 YNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMK 255
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ D +YT ++H + G+++ + EM + +LP T
Sbjct: 256 KRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVAT 300
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 12/414 (2%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ + + + + +S ++VS+VL+ EA TFF WA KQ Y+ ++
Sbjct: 128 KTAIEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKA 187
Query: 75 LGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
LG+ FD+ ++ M G E +V+ I++ H V +A+ F K
Sbjct: 188 LGRRGFFDSMMDVLYNMTREGVEATLEMVS-----IVVDSLVKGHQVSKALQFFRNLKEI 242
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
E LL +CR +V A K PFN ++NI++ GW G E
Sbjct: 243 GLKCDTETLNILLQCMCRRSHVGAANSFFNLTKGNIPFNVMTYNIVIGGWSRY-GRHGEV 301
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
E++ M G D ++ + +I C +A + +++FD+M G D YNA+I
Sbjct: 302 EQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISN 361
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
++ + M P++ TY++LI KA+K+ +A + FDEM+ R I PT
Sbjct: 362 FICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMVAR-IIPT 420
Query: 313 IRTYHAFLDI-IRTGEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+F+ + G +L + RK+GC+ + + Y +L+ + S + +FG + +WN
Sbjct: 421 TGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWN 480
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
E+ E+G PD +Y I L G+LE A E + P +T L +
Sbjct: 481 EMQESGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNN 534
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 192/407 (47%), Gaps = 16/407 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
I++S +LV ++L ++DW++A F WA SG+ H+ Y +I LGK ++
Sbjct: 99 SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMR 158
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
+++EM+ LVT T+ +RR+ A+ F + + E LL
Sbjct: 159 GMLEEMKEAR----LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLL 214
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ K V+ A + K N +FN+ ++GWC + EA EM G
Sbjct: 215 DTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKV-NKIDEAHWTLEEMKGYGHR 273
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
V+S+S II Y N +KV L D+M G + Y ++ +L K ++A+ +
Sbjct: 274 PCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQI 333
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII- 323
+ M+ G P+ + YN LI L +A K+ EA F+ EM + + P TY++ + +
Sbjct: 334 AERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYC 393
Query: 324 -RTGEE-VFGLLESMRKM-GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN---- 376
R EE LLE M+K C+P TY L+K S +R + + N + E N
Sbjct: 394 RRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLK--SCFRTGKTDYDLSNLLDEMINKHHL 451
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D S+Y+ LIH L K + A+Q + +M + + P T +LL D
Sbjct: 452 SLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLD 498
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 144/307 (46%), Gaps = 9/307 (2%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+ +E G++ ++E ++ +L + + + ++ +S A + ++ I KV
Sbjct: 196 DDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVN 255
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K D A ++EM+G P +++ T+++ C + V ++ A +
Sbjct: 256 KIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQ---GCPANVI 312
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVW-M 197
+ ++ +L + + ++A + K + +T +N +++ G REA V+ +
Sbjct: 313 TYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTL-GRAGKVREAIHVFEV 371
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAK- 255
EM + + + +++ +I+ Y + K ++L ++M++ + D + Y ++ + +
Sbjct: 372 EMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRT 431
Query: 256 GRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
G+ D +L+ M K ++ ++ TY+ LI LC+A K D A Q F++M+ + I P
Sbjct: 432 GKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYL 491
Query: 315 TYHAFLD 321
T LD
Sbjct: 492 TCQLLLD 498
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 186/369 (50%), Gaps = 13/369 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL G+ + ++ ++ +L + FD AW + +E++ ++ + I+I+
Sbjct: 111 FLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKS----KVVLDAYSFGIMIK 166
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD---VF 168
C + + F + + + L+ C+Y NV A++L FC D +
Sbjct: 167 GCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNL-FCKMDRLGLV 225
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N ++++++NG+ G RE +++ M + GI + +++C+IS Y + K
Sbjct: 226 P-NPHTYSVLMNGFFKQ-GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAF 283
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++F +M+ GI C YN +I L +G+ +A+ L+ + + G++PN+VTYN LI
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTN 345
C K+D A + F+++ G+SPT+ TY+ + E + G L+ +++M P+
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSK 403
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +LI F+R ++ + + ++G PD +Y+ LIH L ++G ++EA + +
Sbjct: 404 VTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKS 463
Query: 406 MKEKQLLPE 414
+ E L P
Sbjct: 464 LGEMHLQPN 472
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 34/307 (11%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDV 167
LI YC V +A F + A G+ + L+ LCR K +A L+ NK
Sbjct: 269 LISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++NI++NG+C++ G A R++ ++ G+ +V+++ +I+ YSK NL
Sbjct: 329 LSPNIVTYNILINGFCDV-GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L +M+ I + Y +I A A+ + A + ME+ G+ P+V TY+ LI
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDT 347
LC + EA + F +S+ +M QP +
Sbjct: 448 LCVHGNMKEASKLF--------------------------------KSLGEMHLQPNSVI 475
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +I + + ++ NE+ +G P+ +S+ + I L + K +EA +M
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMI 535
Query: 408 EKQLLPE 414
L P
Sbjct: 536 NSGLKPS 542
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+EMR K CG+ + L+ R + + G + + Y+ +I
Sbjct: 287 AEMREKGIACGVMTYNILIG---GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
V K DTA L ++++ P+LVT TL I Y V ++ A++ + A
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTL---IAGYSKVENLAGALDLVKEMEERCIA 400
Query: 136 VGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ L+ A R + A H + + P + +++++++G C + G+ +EA
Sbjct: 401 PSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVP-DVYTYSVLIHGLC-VHGNMKEAS 458
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+++ + + + + V ++ +I Y K + ++ LRL ++M +H+
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM---------------VHS- 502
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
G+ PNV ++ S I LC+ K EA +M+ G+ P++
Sbjct: 503 -------------------GMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Query: 314 RTY 316
Y
Sbjct: 544 SLY 546
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 16/198 (8%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y+ +++A A++ + M +G P T+N+L+ L ++ D+A F+E+
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEV------FGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ + ++F +I+ E F LL + + G P Y LI ++
Sbjct: 151 KSK----VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKY 206
Query: 359 RQFGNVFKVWN---EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
GNV N ++ G P+ +Y+ L++ F G E Q Y MK ++P
Sbjct: 207 ---GNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263
Query: 416 KTDELLQDWSYNKQFVER 433
L N V++
Sbjct: 264 YAYNCLISEYCNGGMVDK 281
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 192/407 (47%), Gaps = 16/407 (3%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
I++S +LV ++L ++DW++A F WA SG+ H+ Y +I LGK ++
Sbjct: 68 SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMR 127
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
+++EM+ LVT T+ +RR+ A+ F + + E LL
Sbjct: 128 GMLEEMKEAR----LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLL 183
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ K V+ A + K N +FN+ ++GWC + EA EM G
Sbjct: 184 DTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKV-NKIDEAHWTLEEMKGYGHR 242
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
V+S+S II Y N +KV L D+M G + Y ++ +L K ++A+ +
Sbjct: 243 PCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQI 302
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII- 323
+ M+ G P+ + YN LI L +A K+ EA F+ EM + + P TY++ + +
Sbjct: 303 AERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYC 362
Query: 324 -RTGEE-VFGLLESMRKM-GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN---- 376
R EE LLE M+K C+P TY L+K S +R + + N + E N
Sbjct: 363 RRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLK--SCFRTGKTDYDLSNLLDEMINKHHL 420
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D S+Y+ LIH L K + A+Q + +M + + P T +LL D
Sbjct: 421 SLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLD 467
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 144/307 (46%), Gaps = 9/307 (2%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+ +E G++ ++E ++ +L + + + ++ +S A + ++ I KV
Sbjct: 165 DDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVN 224
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K D A ++EM+G P +++ T+++ C + V ++ A +
Sbjct: 225 KIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQ---GCPANVI 281
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVW-M 197
+ ++ +L + + ++A + K + +T +N +++ G REA V+ +
Sbjct: 282 TYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGR-AGKVREAIHVFEV 340
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAK- 255
EM + + + +++ +I+ Y + K ++L ++M++ + D + Y ++ + +
Sbjct: 341 EMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRT 400
Query: 256 GRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
G+ D +L+ M K ++ ++ TY+ LI LC+A K D A Q F++M+ + I P
Sbjct: 401 GKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYL 460
Query: 315 TYHAFLD 321
T LD
Sbjct: 461 TCQLLLD 467
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 211/467 (45%), Gaps = 37/467 (7%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+M ++E + +++ +V ++L ++ + + AF FF WAG Q Y+H Y+ MI IL
Sbjct: 111 DMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 77 ----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
K ++F ++D M+ ++V LL ++R+YC + + F KR
Sbjct: 171 STKYKNKQFRIVIDMLDYMK--RNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRI 226
Query: 133 KFAVG--IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ I F LL ALC+ V++ E L+ + + +FN++ GWC + +
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRV-RDPK 285
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYN 247
+A ++ EM + G + ++ I + +A + + LFD M G K +
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I ALAK ++ L+ M G P+V TY +I+ +C A K+DEA + DEM +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G P I TY+ FL ++ R +E L M + C P+ TY MLI F
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQD 423
F W E+ + D +Y A+I+ LF + +EA E+ K L LP D L
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
Query: 424 WSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRR 470
S ++ +LKA I K S+ ++F RR
Sbjct: 526 LS--------EVGNLKA-----------IHKVSEHMKKFYNHSMARR 553
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 7/368 (1%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
+ FF WA G+ S Y+ MI + GK+R FD AW LID M+ +T T
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVR---ITVSTFS 182
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
+L+RRY A++AF + + F ++S+LC+ + +AE K
Sbjct: 183 VLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK 242
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + +++GWC G +AE V+ +M + G+ +V ++S +I + + +
Sbjct: 243 FEPDVIVYTSLVHGWCR-AGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRA 301
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F +M G + + +N+++ K + + + M+ G A + ++YN LI+
Sbjct: 302 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIES 361
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPT 344
CK LDEA + D M+++G++P T+++ I +V G + M+++ C P
Sbjct: 362 HCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPN 421
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +L++ F+ + V K+ E+ E+ P+ ++Y LI G A+
Sbjct: 422 TLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMK 481
Query: 405 EMKEKQLL 412
EM E++ L
Sbjct: 482 EMVEEKCL 489
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + EA + M G D VSFS +IS K R + FD +K E D VY
Sbjct: 192 GLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKH-KFEPDVIVY 250
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+++H + + A + M+E GV PNV TY+ +I LC+ ++ A F EM+
Sbjct: 251 TSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMID 310
Query: 307 RGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G P T+++ + + ++ G E+V + M+++GC +Y LI+ +
Sbjct: 311 AGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDE 370
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
KV + + + G P+ S++ ++ + + AH+ Y +MKE + +P T +L
Sbjct: 371 AVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNIL 428
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G + Y +I L + + A + EM P+ VT +L+ R +
Sbjct: 274 KEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLM---RVHVKA 330
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ + + KR A + L+ + C+ +N+ +A ++ K V P N +
Sbjct: 331 GRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAP-NAST 389
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN I G + A R++ +M + + ++++ ++ ++ ++++ VL+L +M
Sbjct: 390 FNSIF-GCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEM 448
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARK 293
+E + Y +I + +A +LMK M EEK + PN+ Y ++++ L A +
Sbjct: 449 DESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQ 508
Query: 294 LDEARQAFDEMLQRG-ISP 311
L + + ++M+ RG +SP
Sbjct: 509 LKKHEELVEKMVARGFVSP 527
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 183/372 (49%), Gaps = 11/372 (2%)
Query: 58 QSGYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G A + Y+ ++ A+ + ++ + + D+MRG P++VT TL + +C
Sbjct: 147 RDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTL---VAAFCRA 203
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+V A + + F +++ LC+ ++DA + + + P + S
Sbjct: 204 GEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTP-DGVS 262
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +++G+C G EA V+ EM+Q+G+ DVV+F+ +I +A NL + + L QM
Sbjct: 263 YNTLVSGYCKA-GCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM 321
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ + + A+I + + DA+ MK M E + P+VV YN LI CK ++
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
DEAR+ EM +G+ P + TY L I + F L M K G P TY L
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I+ R+ G+ +++ ++ + G PD +YT LI G +++A + EM +K +
Sbjct: 442 IRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV 501
Query: 412 LPEPKTDELLQD 423
LP+ T +L D
Sbjct: 502 LPDVVTYSVLID 513
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 8/336 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G S ++T++ L K + + A + DEM P V+ T L+ YC
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNT---LVSGYCKA 273
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSF 175
+ A+ F + + F L+ A+CR N++ A L+ ++ N +F
Sbjct: 274 GCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF 333
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G+C G +A EM + I VV ++ +I+ Y K + + L +M+
Sbjct: 334 TALIDGFCR-NGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y+ ++ K A L + M +KGV P+ +TY+SLI+ LC+ R+L
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A + F++MLQ G+ P TY +D + G ++ L + M K G P TY +LI
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
S+ + ++ ++ PD Y AL+H
Sbjct: 513 DGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 170/391 (43%), Gaps = 31/391 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + ++I + + + A AL+ +MR E G + + T LI +C
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR--ERGLRM-NEFTFTALIDGFCRNG 344
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+ A + + + + L++ C+ + +A L+ K + P + ++
Sbjct: 345 FLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP-DVVTY 403
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ IL+G+C I G + A + +M ++G+ D +++S +I + R L LF++M
Sbjct: 404 STILSGYCKI-GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML 462
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G++ D Y +I K V+ A+SL M +KGV P+VVTY+ LI L K+ +
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGE--EVFGLLESMRKMGCQPTND------- 346
EA++ ++ P Y A + RT E V LL+ G D
Sbjct: 523 EAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSML 582
Query: 347 ---------TYIMLIKKFSRWRQFGNVFKVWN---EISENGNGPDRSSYTALIHALFLNG 394
Y +LI R GN+ K + ++ G P+ +S +L+ LF G
Sbjct: 583 DRHWKLDGSVYSVLIHGHCRG---GNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
EA E+ L + +T + L D +
Sbjct: 640 MTVEADNVIQELLNCCSLADAETSKALIDLN 670
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 5/241 (2%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G +++++ ++ S A +L RL M R G+ + YN ++ AL ++A
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 263 ISLM-KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ ++ M G APNVVTYN+L+ C+A ++D A + M + G+ P++ T++ ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G E+ + + M + G P +Y L+ + + V+ E+++ G P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
D ++T+LIHA+ G LE A +M+E+ L T L D F++ + ++
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353
Query: 439 K 439
K
Sbjct: 354 K 354
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 114/313 (36%), Gaps = 65/313 (20%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K+ + D A LI EM P +VT T+L YC + D A
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL---SGYCKIGDTDSAFELNR 424
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNG 181
+ + L+ LC + + DA L + D F + T +++G
Sbjct: 425 KMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT-----LIDG 479
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF---------- 231
C G+ ++A + EM ++G+ DVV++S +I SK+ + RL
Sbjct: 480 HCKE-GNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVP 538
Query: 232 DQMKRMGI----------------------------------------ECDRKVYNAVIH 251
D +K + + D VY+ +IH
Sbjct: 539 DNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIH 598
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+G + A+S K + G +PN + SL++ L + EA E+L
Sbjct: 599 GHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLA 658
Query: 312 TIRTYHAFLDIIR 324
T A +D+ R
Sbjct: 659 DAETSKALIDLNR 671
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 195/426 (45%), Gaps = 11/426 (2%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
+L +L +F R ++ + ++ + VL R+ + FFL+AG+ G++
Sbjct: 67 SLCRVLSDFRGPRHDLPAALRGFAPWLTPGDAAAVLRRCRHLPLPSLRFFLFAGELPGFS 126
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H + L R F +L+ ++ PS +++ +L R Y A
Sbjct: 127 HHPDSLLVLANSLAGARLFPLLRSLLSDL-----PPSALSRGLFPLLFRAYSRARLPEDA 181
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
I AF + F F I DF LL AL R V+ E + F + K++ I+++GW
Sbjct: 182 IRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILISGW 241
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIEC 241
++ A ++ EM +RG+ DV ++ +I + ++ M K G+
Sbjct: 242 A-VVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVP 300
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y +HA + V+ A+ ++ M + PNV TYN++I+ LC +++EA
Sbjct: 301 NAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNIL 360
Query: 302 DEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
DE+ +G P + +Y+ L+ ++ + L+ M K C P +Y ML+K
Sbjct: 361 DEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGV 420
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLLPEPKT 417
+F +VW+ + + G P ++Y +IH L G+ E+A Y++ M ++ + P T
Sbjct: 421 GRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQAT 480
Query: 418 DELLQD 423
E+L+D
Sbjct: 481 CEVLRD 486
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 211/468 (45%), Gaps = 37/468 (7%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+M ++E + +++ +V ++L ++ + + AF FF WAG Q Y+H Y+ MI IL
Sbjct: 8 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 67
Query: 76 G----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
K ++F ++D M+ ++V LL ++R+YC + + F KR
Sbjct: 68 SSTKYKNKQFRIVIDMLDYMK--RNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKR 123
Query: 132 FKFAVG--IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ I F LL ALC+ V++ E L+ + + +FN++ GWC +
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRV-RDP 182
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVY 246
++A ++ EM + G + ++ I + +A + + LFD M G K +
Sbjct: 183 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 242
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I ALAK ++ L+ M G P+V TY +I+ +C A K+DEA + DEM
Sbjct: 243 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 302
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P I TY+ FL ++ R +E L M + C P+ TY MLI F
Sbjct: 303 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 362
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQ 422
F W E+ + D +Y A+I+ LF + +EA E+ K L LP D L
Sbjct: 363 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLM 422
Query: 423 DWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRR 470
S ++ +LKA I K S+ ++F RR
Sbjct: 423 RLS--------EVGNLKA-----------IHKVSEHMKKFYNHSMARR 451
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 15/389 (3%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ + V +VL+ ++ D + A FF WA KQ GY H+T Y TMI ILG+ + F +L+
Sbjct: 181 LNPDAVVKVLN-LQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLL 239
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLS 146
+M +T +T+ L + Y ++ AF K + G+ D + +L
Sbjct: 240 QKM---QTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLV 296
Query: 147 ALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSRE-AERVWMEMSQRG 203
+L + K + AE+L N V N ++I C + E A ++ +M Q
Sbjct: 297 SLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMI---QCFFLKEKMEDAMKLLDDMIQNN 353
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
DVV+++ +IS K + + + + +M+ G E + YNA+I L R ++A+
Sbjct: 354 YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL 413
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L+ ME+ GV PN+ TY L LCK R+LD A++ F+E L RG+ P TY+ L+
Sbjct: 414 ELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGY 473
Query: 324 RTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
G E +L+ M + C P + TY LI+ + Q + ++ +E+ G +
Sbjct: 474 CRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNF 533
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ L L G ++A +Y MK++
Sbjct: 534 DTLNILARGLARVGNHKDASIFYRRMKDR 562
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 8/362 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + + Y +MI K + A L+D+M P +VT I+I C
Sbjct: 317 NGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVT---YTIVISALCKRKM 373
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNI 177
+ +A + I + L+ LC + ++A E + + P N ++ I
Sbjct: 374 IEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTI 433
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+ +G C + R A+ ++ E RG+ + V+++ +++ Y + L + + + +M +
Sbjct: 434 LTHGLCKLRRLDR-AKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQN 492
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D Y +I L +G + DA+ + ME KG N T N L + L + +A
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDA 552
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ M RG + + Y+ + + T EE LL M G P TY +IK
Sbjct: 553 SIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKG 612
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F R + + + N + ENG GPD SY LI G+ ++A Q Y E+ ++
Sbjct: 613 FCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLN 672
Query: 415 PK 416
PK
Sbjct: 673 PK 674
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
S EA + EM D S ++S K + L LF QM G+ C+ Y +
Sbjct: 270 SLEAFNLMKEMGYEPGLIDTAYNSVLVS-LVKNKKLDMAENLFAQMINNGVSCNNLTYTS 328
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I ++DA+ L+ M + AP+VVTY +I LCK + +++A +M + G
Sbjct: 329 MIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG 388
Query: 309 ISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P I TY+A + +R EE L+ M + G P TY +L + R+
Sbjct: 389 CEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAK 448
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++NE G P+R +Y L++ +L EA EM + P+
Sbjct: 449 EMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPD 497
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 46/302 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q+ YA Y +I+ L K + + A+ ++ +MR P++ T L I+ CAV
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNAL---IQGLCAVR 407
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
A+ ++ I + L LC+ + + A+ + + + P N ++
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP-NRVTY 466
Query: 176 NIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N +LNG+C SR EA + EM Q D V+++ +I + L LR+ D+
Sbjct: 467 NTLLNGYCR---GSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDE 523
Query: 234 MKRMGIECDRKVYNAV-----------------------------------IHALAKGRL 258
M+ G + + N + IH L+
Sbjct: 524 MENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGE 583
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+++A +L+ M KG +PN+ TYN++IK C+ +LD+A + M++ GI P +Y+
Sbjct: 584 MEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNI 643
Query: 319 FL 320
+
Sbjct: 644 LI 645
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 9/268 (3%)
Query: 184 NIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I+G ++ E + + +M +G + Y ++ + L F+ MK MG E
Sbjct: 224 DILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYE 283
Query: 241 CD--RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
YN+V+ +L K + + A +L M GV+ N +TY S+I+ K+++A
Sbjct: 284 PGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAM 343
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ D+M+Q +P + TY + + + E+ +G+L+ MR+ GC+P TY LI+
Sbjct: 344 KLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGL 403
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R+ ++ + + G P+ +YT L H L +L+ A + + E + L P
Sbjct: 404 CAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNR 463
Query: 416 KT-DELLQDWSYNKQFVERQIASLKAHQ 442
T + LL + + +E + HQ
Sbjct: 464 VTYNTLLNGYCRGSRLIEAMDILKEMHQ 491
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 15/320 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+MR E I + L+ + L VR EA L +Q G + Y + L
Sbjct: 383 KMRENGCEPNIYTYNALI-QGLCAVRRPEEALELVTLM--EQGGVPPNIYTYTILTHGLC 439
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K+R+ D A + +E P+ VT TLL YC + A++ +
Sbjct: 440 KLRRLDRAKEMFNEALARGLKPNRVTYNTLL---NGYCRGSRLIEAMDILKEMHQNDCTP 496
Query: 137 GIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ L+ L + + DA H NK + N + NI+ G + G+ ++A
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENKG-YDVNFDTLNILARGLARV-GNHKDASI 554
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ M RG Y + I C S A + + L +M G + YN +I
Sbjct: 555 FYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFC 614
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI----S 310
+ + DA +++ M E G+ P+ +YN LIK + +A Q + L+RG+
Sbjct: 615 RQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
Query: 311 PTIRTYHAFLD-IIRTGEEV 329
P I+ + ++R+ EE+
Sbjct: 675 PVIQEPDELPEGLVRSQEEL 694
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 15/403 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+ +S LV ++L R+DW +A WA G+ HS+ Y + ILGK +K+D
Sbjct: 147 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 206
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
++ MRG + LVT T+ ++RR+ + A+ F F E LL
Sbjct: 207 FVERMRGDK----LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLD 262
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRGI 204
LC+ K V+ A ++ K N +FNI ++GWC ++R E +W EM G
Sbjct: 263 TLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGF 319
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V+S++ II CY + KV + +M+ G + Y ++ +L + ++A+
Sbjct: 320 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 379
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII 323
+ M+ G P+ + YN LI L +A +L+EA + F EM + G+S TY++ + +
Sbjct: 380 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 439
Query: 324 RTGEEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGP 378
+E +E +++M C P TY L++ + V K+ E ++++
Sbjct: 440 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 499
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D S+YT LI L E A+ + EM + + P +T LL
Sbjct: 500 DESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLL 542
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 128/320 (40%), Gaps = 45/320 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+WE A F G + G +T + ++ L K ++ + A ++ +++ T
Sbjct: 234 EWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP----NA 288
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLMF 162
T I I +C + V A+ K F + + ++ C+ ++ ++ E L
Sbjct: 289 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 348
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ P N+ ++ I++ N EA RV M + G D + ++C+I ++A
Sbjct: 349 MEANGSPPNSITYTTIMSS-LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 407
Query: 223 NLHKVLRLFD-QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA-PNVVT 280
L + R+F +M +G+ + YN++I AI L+K ME + P+V T
Sbjct: 408 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 467
Query: 281 YNSL------------------------------------IKPLCKARKLDEARQAFDEM 304
Y L I+ LC+A + A F+EM
Sbjct: 468 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 527
Query: 305 LQRGISPTIRTYHAFLDIIR 324
+ + I+P RT L+ ++
Sbjct: 528 ISQDITPRHRTCLLLLEEVK 547
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 191/402 (47%), Gaps = 10/402 (2%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+S LV VL ++ + FF WA + H+ Y M+ ILGK R+F+T AL+
Sbjct: 202 LSEALVLAVLDRFKHAHRPSRRFFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALV 261
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
EM G+ G + I I+ + A ++ A+ F + F G+E F LL AL
Sbjct: 262 QEM--GKAG--ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVAL 317
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
+ ++A + +D + + +S+ ++ WCN + EA RVW +M ++G+ DV
Sbjct: 318 AQEGLGKEAARVFDRMRDQYTPDLRSYTALMLAWCNA-RNLVEAGRVWNDMLEKGMKPDV 376
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V + +I + + + +++F+ MK G + Y +I K + A+ +
Sbjct: 377 VVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEE 436
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT--- 325
M+ G P V TY L+ A+++D +EM Q+G P RTY+A + ++
Sbjct: 437 MQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNM 496
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
++ + + M G +PT TY M++K F R + VW E+ G PD +SYT
Sbjct: 497 PDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYT 556
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWS 425
I+ +G+ EA ++ EM +K + P+ ++ D+S
Sbjct: 557 VFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFS 598
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 39/260 (15%)
Query: 184 NIIGSSREAER---VWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+I+G +R+ E + EM + G +C D +F I ++ A + + +F+ M+ G
Sbjct: 246 HILGKARQFETMVALVQEMGKAGALCMD--AFKIAIKSFAAAGEIKNAVGVFEMMRVHGF 303
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ + +N ++ ALA+ L K+A + M ++ P++ +Y +L+ C AR L EA +
Sbjct: 304 DDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARNLVEAGR 362
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+++ML++G+ P + ++ +D GLL R+
Sbjct: 363 VWNDMLEKGMKPDVVVHNTMID---------GLLRGQRR--------------------- 392
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
K++ + G P+ +YT LI GKL+ A + + EM+ PE T
Sbjct: 393 --PEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYT 450
Query: 420 LLQDWSYNKQFVERQIASLK 439
L N + ++R A L+
Sbjct: 451 CLLVGYGNAKRMDRVTAMLE 470
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 213/475 (44%), Gaps = 25/475 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + G+ +S+ L+ VL R D A + A + G A S T +
Sbjct: 52 SAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTAL 111
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ R P VT +T ++++ R V V +++F R
Sbjct: 112 YVLGRARRFAHMWDLLRSSR--RLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRM 169
Query: 133 KFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
G + F LL LC+ K++ DA ++ K F N ++FNI+L+GW S
Sbjct: 170 LRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW----KS 225
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ +AE EM + G+ D+V+++ +I C+ K R + +L D+M+ I D Y +
Sbjct: 226 AEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTS 285
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A L+K M E G P+V YN+ I+ A++L +A +EM +G
Sbjct: 286 LIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKG 345
Query: 309 ISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY+ F ++ + L E MR GC P + + +++ R +
Sbjct: 346 LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQAL 405
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
++W+++ NG G L L GKL+EA + + +M E L + ++ +
Sbjct: 406 ELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIE---LGQKPSNVAFRRIK 462
Query: 426 YNKQFVERQ--IASLKAHQPQSG----QNTRVISKKSDQDREFLQQPETRRVVRH 474
Q R+ IA L A Q G ++ R + + + +T +V+H
Sbjct: 463 ILMQLANREESIARLTAQMAQFGRLAPEDCRRVDHTLQSTHQSSDRTDTDTIVKH 517
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 15/403 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+ +S LV ++L R+DW +A WA G+ HS+ Y + ILGK +K+D
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
++ MRG + LVT T+ ++RR+ + A+ F F E LL
Sbjct: 143 FVERMRGDK----LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLD 198
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRGI 204
LC+ K V+ A ++ K N +FNI ++GWC ++R E +W EM G
Sbjct: 199 TLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGF 255
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V+S++ II CY + KV + +M+ G + Y ++ +L + ++A+
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII 323
+ M+ G P+ + YN LI L +A +L+EA + F EM + G+S TY++ + +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 324 RTGEEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGP 378
+E +E +++M C P TY L++ + V K+ E ++++
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D S+YT LI L E A+ + EM + + P +T LL
Sbjct: 436 DESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLL 478
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 129/320 (40%), Gaps = 45/320 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+WE A F G + G +T + ++ L K ++ + A ++ +++ T +
Sbjct: 170 EWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNA---- 224
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLMF 162
T I I +C + V A+ K F + + ++ C+ ++ ++ E L
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ P N+ ++ I++ N EA RV M + G D + ++C+I ++A
Sbjct: 285 MEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 223 NLHKVLRLFD-QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA-PNVVT 280
L + R+F +M +G+ + YN++I AI L+K ME + P+V T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 281 YNSL------------------------------------IKPLCKARKLDEARQAFDEM 304
Y L I+ LC+A + A F+EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 305 LQRGISPTIRTYHAFLDIIR 324
+ + I+P RT L+ ++
Sbjct: 464 ISQDITPRHRTCLLLLEEVK 483
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 213/475 (44%), Gaps = 25/475 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + G+ +S+ L+ VL R D A + A + G A S T +
Sbjct: 58 SAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTAL 117
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ R P VT +T ++++ R V V +++F R
Sbjct: 118 YVLGRARRFAHMWDLLRSSR--RLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRM 175
Query: 133 KFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
G + F LL LC+ K++ DA ++ K F N ++FNI+L+GW S
Sbjct: 176 LRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW----KS 231
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ +AE EM + G+ D+V+++ +I C+ K R + +L D+M+ I D Y +
Sbjct: 232 AEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTS 291
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A L+K M E G P+V YN+ I+ A++L +A +EM +G
Sbjct: 292 LIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKG 351
Query: 309 ISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY+ F ++ + L E MR GC P + + +++ R +
Sbjct: 352 LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQAL 411
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
++W+++ NG G L L GKL+EA + + +M E L + ++ +
Sbjct: 412 ELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIE---LGQKPSNVAFRRIK 468
Query: 426 YNKQFVERQ--IASLKAHQPQSG----QNTRVISKKSDQDREFLQQPETRRVVRH 474
Q R+ IA L A Q G ++ R + + + +T +V+H
Sbjct: 469 ILMQLANREESIARLTAQMAQFGRLAPEDCRRVDHTLQSTHQSSDRTDTDTIVKH 523
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 15/403 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+ +S LV ++L R+DW +A WA G+ HS+ Y + ILGK +K+D
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
++ MRG + LVT T+ ++RR+ + A+ F F E LL
Sbjct: 143 FVERMRGDK----LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLD 198
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRGI 204
LC+ K V+ A ++ K N +FNI ++GWC ++R E +W EM G
Sbjct: 199 TLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGF 255
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V+S++ II CY + KV + +M+ G + Y ++ +L + ++A+
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII 323
+ M+ G P+ + YN LI L +A +L+EA + F EM + G+S TY++ + +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 324 RTGEEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGP 378
+E +E +++M C P TY L++ + V K+ E ++++
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D S+YT LI L E A+ + EM + + P +T LL
Sbjct: 436 DESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLL 478
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 129/320 (40%), Gaps = 45/320 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+WE A F G + G +T + ++ L K ++ + A ++ +++ T +
Sbjct: 170 EWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNA---- 224
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLMF 162
T I I +C + V A+ K F + + ++ C+ ++ ++ E L
Sbjct: 225 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ P N+ ++ I++ N EA RV M + G D + ++C+I ++A
Sbjct: 285 MEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 223 NLHKVLRLFD-QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA-PNVVT 280
L + R+F +M +G+ + YN++I AI L+K ME + P+V T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 281 YNSL------------------------------------IKPLCKARKLDEARQAFDEM 304
Y L I+ LC+A + A F+EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 305 LQRGISPTIRTYHAFLDIIR 324
+ + I+P RT L+ ++
Sbjct: 464 ISQDITPRHRTCLLLLEEVK 483
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 193/426 (45%), Gaps = 11/426 (2%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
+L +L +F + ++ + + VL R+ + FFL+AG+ G++
Sbjct: 60 SLCRVLSDFRGRGQDLPAALRGFAPGFQPRDAAAVLRRCRHLPLPSLRFFLFAGELPGFS 119
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H + L R F +L+ ++ PS +++ +L R Y A
Sbjct: 120 HHPDSLLVLANSLAGARLFPLLRSLLSDLP-----PSALSRGLFPLLFRAYSRARLPEDA 174
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
I AF + F F I DF LL AL R V+ E + F + K++ I+++GW
Sbjct: 175 IRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQFDVSAKAYTILISGW 234
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIEC 241
++ A ++ EM +RG+ DV ++ +I + ++ M K G+
Sbjct: 235 A-VVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVP 293
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y +HA + V+ A+ ++ M + PNV TYN++I+ LC +++EA
Sbjct: 294 NAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNIL 353
Query: 302 DEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
DE+ +G P + +Y+ L+ ++ + L+ M K C P +Y ML+K
Sbjct: 354 DEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLISV 413
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLLPEPKT 417
+F +VW+ + + G P ++Y +IH L G+ E+A Y++ M ++ + P T
Sbjct: 414 GRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQAT 473
Query: 418 DELLQD 423
E+L+D
Sbjct: 474 CEVLRD 479
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 214/468 (45%), Gaps = 32/468 (6%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + G+ +S+ L+ VL R D A + A + G A S T +
Sbjct: 58 SAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTAL 117
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ R P VT +T ++++ R V V +++F R
Sbjct: 118 YVLGRARRFAHMWDLLRSSR--RLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRM 175
Query: 133 KFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
G + F LL LC+ K++ DA ++ K F N ++FNI+L+GW S
Sbjct: 176 LRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGW----KS 231
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ +AE EM + G+ D+V+++ +I C+ K R + +L D+M+ I D Y +
Sbjct: 232 AEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTS 291
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A L+K M E G P+V YN+ I+ A++L +A +EM +G
Sbjct: 292 LIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKG 351
Query: 309 ISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY+ F ++ + L E MR GC P + + +++ R +
Sbjct: 352 LMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQAL 411
Query: 366 KVWNEISENGNGPDRSSYTALIHALF----LNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++W+++ NG G S+T + LF GKL+EA + + +M E L + ++
Sbjct: 412 ELWSDMVNNGFG----SFTLVSDVLFDLLCDEGKLDEAERCFHQMIE---LGQKPSNVAF 464
Query: 422 QDWSYNKQFVERQ--IASLKAHQPQSGQNTRVISKKSDQDREFLQQPE 467
+ Q R+ IA L A Q G R I++K ++ Q E
Sbjct: 465 RRIKILMQLANREESIARLTAQMAQFG---REITEKESSVLRYVVQAE 509
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 204/458 (44%), Gaps = 48/458 (10%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHT 70
S K E+ ++E G S +++ + D E F L+ K+ G + +
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
++ LGK + D A L+DEM+ P +VT L I + V D+ A N K
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL---IAGFGKVGDLVEAYNLLDEMK 281
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
R + + L++ L + + +A + L K+ P +T ++N ++NG G
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGL-GKAGLL 340
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+A R++ M +G DVV++S +I+ KA + LF++M+ +GI+ D Y ++
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSI 400
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L K V DA L M KG++P+V+TYN+ + L + + EAR+ F++M + G+
Sbjct: 401 ITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460
Query: 310 SPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQ------------------------ 342
P + TY A L + +EV GLL+ + + GC
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520
Query: 343 -----------PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
P +Y LI ++ + F ++ E G PD SY++LI AL
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTDE----LLQDWS 425
G+++ A + EM ++ L P++ LQDW
Sbjct: 581 QTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 19/383 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G R Y+ +I+ LGK + A+ L EMR P T +L+ +
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIY------GL 159
Query: 117 HDVGR---AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
VGR A+ +R + + L++ L + A L +++ K
Sbjct: 160 GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLF---QEMKRRGRK 216
Query: 174 SFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+I + +G + +A + EM +RG+ VV+++ +I+ + K +L + L
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D+MKR G + D Y+ +I L K + +A ++K ME++G P+ +TYN+LI L K
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK 336
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDT 347
A L++A + FD M +G +P + TY + + E L E M +G QP T
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +I + Q + ++++E+ G PD +Y A +++L G+ +EA + + +MK
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Query: 408 EKQLLPEPKT-DELLQDWSYNKQ 429
E LLP+ T D LL S K+
Sbjct: 457 ESGLLPDVATYDALLLGLSKTKE 479
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 167/374 (44%), Gaps = 44/374 (11%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WEAA + G + Y+T++ LGK +FD A L+ EMR P
Sbjct: 60 WEAALEVVAEM-QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPD----- 113
Query: 105 TLLILIRRY-CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
+R Y C + +G+A A+ F A R + C
Sbjct: 114 -----VRTYNCLISTLGKAGRLSEAFTLF--------------AEMRERG---------C 145
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
D F +N+ + + +G S++A + EM + G DV+++S +I+ K
Sbjct: 146 VPDTFTYNSLIYGL------GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
K +LF +MKR G + D + A++ AL K V DA+ L+ M+E+GV P VVTYN+
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMG 340
LI K L EA DEM + G P + TY + +I+ +E +L+ M K G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
C P TY LI + + ++++ + G PD +Y+ LI AL ++E A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 401 QYYMEMKEKQLLPE 414
+ EM+ + P+
Sbjct: 380 VLFEEMESVGIQPD 393
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 193/443 (43%), Gaps = 52/443 (11%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AFT F ++ G T Y+++I LGKV + A L++EM P ++T +L+
Sbjct: 133 AFTLFAEM-RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--F 162
+ G + AF ++ K D F L+ AL + V DA L+
Sbjct: 192 T------GLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ V P ++N ++ G+ +G EA + EM + G DVV++SC+I+ KA
Sbjct: 246 KERGVKP-GVVTYNALIAGF-GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L + ++ +M++ G D YN +I+ L K L+ DA L M+ KG P+VVTY+
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363
Query: 283 SLIKPLCKARKL-----------------------------------DEARQAFDEMLQR 307
+LI L KA ++ D+A + F EM +
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 308 GISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+SP + TY+AFL+ + G +E + E M++ G P TY L+ S+ ++ +
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+ E+ E G D + + L G ++EAH+ K L P + L D
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543
Query: 425 SYNKQFVERQIASLKAHQPQSGQ 447
V +L+ + Q G+
Sbjct: 544 LAKAGRVSEAFNTLEDLKEQGGK 566
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 126/250 (50%), Gaps = 5/250 (2%)
Query: 168 FPF-NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
FP N ++N +LN G EA+ ++ E+ DVVS+SC+I+ +A
Sbjct: 4 FPSPNVVTYNSLLNALAKA-GQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L + +M+ G + + YN ++ L K +A+ L+ M + G P+V TYN LI
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQP 343
L KA +L EA F EM +RG P TY++ L + ++ LLE M + GC P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LI + + FK++ E+ G PD ++TAL+ AL G++++A +
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 404 MEMKEKQLLP 413
EMKE+ + P
Sbjct: 243 DEMKERGVKP 252
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+VV+++ +++ +KA + LF+++K D Y+ +I++L + + A+ ++
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RT 325
M+ KG PN+ TYN+L+ L KA + DEA + EM G P +RTY+ + + +
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G E F L MR+ GC P TY LI + + ++ E+ +G PD +Y
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++LI L +G+ +A + + EMK + P+ T L D
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMD 227
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFG 331
+PNVVTYNSL+ L KA + +EA+ F+E+ +P + +Y ++ + R G E
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
++ M+ GC+P TY L+ + QF ++ E+ +NG PD +Y LI L
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 392 LNGKLEEAHQYYMEMKEKQLLPE 414
G+L EA + EM+E+ +P+
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPD 148
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 185/368 (50%), Gaps = 11/368 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL G+ + ++ ++ +L + FD AW + +E++ ++ + I+I+
Sbjct: 111 FLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS----KVVLDAYSFGIMIK 166
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFP 169
C + + F + + + L+ C+ NV A++L FC N+
Sbjct: 167 GCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNL-FCKMNRLGLV 225
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++++++NG+ G RE +++ M + GI + +++C+IS Y + K +
Sbjct: 226 PNPHTYSVLMNGFFKQ-GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFK 284
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +M+ GI C YN +I L +G+ +A+ L+ + + G++PN+VTYN LI C
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTND 346
RK+D A + F+++ G+SPT+ TY+ + E + G L+ +++M P+
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +LI F+R ++ + + ++G PD +Y+ L+H L ++G ++EA + + +
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL 464
Query: 407 KEKQLLPE 414
E L P
Sbjct: 465 GEMHLQPN 472
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 40/284 (14%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDV 167
LI YC V +A F + A G+ + L+ LCR K +A L+ NK
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++NI++NG+C++ A R++ ++ G+ +V+++ +I+ YSK NL
Sbjct: 329 LSPNIVTYNILINGFCDV-RKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 228 LRLFDQMK-----------------------------------RMGIECDRKVYNAVIHA 252
L L +M+ + G+ D Y+ ++H
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHG 447
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L +K+A L KS+ E + PN V YN++I CK A + +EM+Q G+ P
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507
Query: 313 IRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIK 353
+ ++ + + ++ E E LL M G +P+ Y M+ K
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 37/204 (18%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y+ V++A A++ + M +G P T+N+L+ L ++ D+A F+E+
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150
Query: 305 LQR----------------------------------GISPTIRTYHAFLD-IIRTGEEV 329
+ G+SP + Y +D + G +
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 330 FG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L M ++G P TY +L+ F + F+++ + +G P+ +Y LI
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 388 HALFLNGKLEEAHQYYMEMKEKQL 411
+G +++A + + EM+EK +
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGI 294
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 190/403 (47%), Gaps = 15/403 (3%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+ +S LV ++L R+DW++A WA G+ HS Y + ILGK +K+D
Sbjct: 81 VNLSDGLVYKLLHRFRDDWKSALGVLNWAESCKGHKHSNDAYDMAVDILGKAKKWDRLKV 140
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
++ MRG + LVT T+ ++RR+ + A+ F F E LL
Sbjct: 141 FVERMRGDK----LVTLNTIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLD 196
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRGI 204
LC+ K V+ A ++ K N +FNI ++GWC ++R E +W EM G
Sbjct: 197 TLCKEKRVEQARVVLLELKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGF 253
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
V+S++ II CY + KV + +M+ G + Y ++ +L + ++A+
Sbjct: 254 RPCVISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 313
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EMLQRGISPTIRTYHAFLDII 323
+ M+ G P+ + YN LI L ++ +L+EA + F EM + G+S TY++ + +
Sbjct: 314 VATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 373
Query: 324 RTGEEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGP 378
+E +E +++M C P TY L++ + V K+ E ++++
Sbjct: 374 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 433
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D S+YT LI L E A+ + EM + + P +T LL
Sbjct: 434 DESTYTFLIQRLCRANICEWAYCLFEEMISQDITPRHRTCLLL 476
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 127/320 (39%), Gaps = 45/320 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+WE A F G + G +T + ++ L K ++ + A ++ E++ T +
Sbjct: 168 EWEEAVGIFDKLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLELKSHITPNA---- 222
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN-VQDAEHLMF 162
T I I +C + V A+ K F + + ++ C+ V+ E L
Sbjct: 223 HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQSEFVKVYEMLSE 282
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ P N+ ++ I++ N EA RV M + G D + ++C+I +++
Sbjct: 283 MEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATRMKRSGCQPDSLFYNCLIHTLARSG 341
Query: 223 NLHKVLRLFD-QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA-PNVVT 280
L + R+F +M +G+ + YN++I AI L+K ME + P+V T
Sbjct: 342 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 401
Query: 281 YNSL------------------------------------IKPLCKARKLDEARQAFDEM 304
Y L I+ LC+A + A F+EM
Sbjct: 402 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANICEWAYCLFEEM 461
Query: 305 LQRGISPTIRTYHAFLDIIR 324
+ + I+P RT L+ ++
Sbjct: 462 ISQDITPRHRTCLLLLEEVK 481
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 9/376 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG + + Y+ +I + EM P++VT T+ I YC +
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTI---IDAYCKLR 252
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFN 176
+G A + + +++ LCR +++ +E L +K + + +FN
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++NG+CN+ G+ +A + EM + G+ +VV+++ +I+ KA NL++ + DQM+
Sbjct: 313 TLINGYCNV-GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + + Y +I ++ +K A +MK M E G P ++TYN+LI C ++++
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
A EM++RG P + +Y + +E+ F L M G P TY LI+
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R+ G V ++ E+ G PD +YT+LI+A + G L++A + + EM +K P
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551
Query: 414 EPKTDELLQDWSYNKQ 429
+ T +L + +NKQ
Sbjct: 552 DIVTYNVLIN-GFNKQ 566
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 11/368 (2%)
Query: 56 GKQSGYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
K G+ Y+ ++ A++ + A + EM P++ T ILIR +C
Sbjct: 158 AKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN---ILIRGFC 214
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
++ + F +R + + ++ A C+ + + +A L+ K + P N
Sbjct: 215 TAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNP-NL 273
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
S+N+++NG C G +E + EMS+R D V+F+ +I+ Y N H+ L L
Sbjct: 274 ISYNVVINGLCRE-GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M + G+ + Y +I+++ K + A+ + M ++G+ PN TY +LI +
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYI 349
L +A Q EM++ G +PTI TY+A ++ I+ E+ GLL+ M + G P +Y
Sbjct: 393 FLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYS 452
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I F R ++ F++ E+ G PD ++Y++LI L +L E + EM
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 410 QLLPEPKT 417
L P+ T
Sbjct: 513 GLPPDEVT 520
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 160/377 (42%), Gaps = 25/377 (6%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y ++T+I V F A L EM P++VT TL I C ++
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL---INSMCKAGNLN 360
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIIL 179
RA+ + + L+ + ++ A +M ++ F ++N ++
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C I+G +A + EM +RG DVVS+S IIS + + + L K +L +M GI
Sbjct: 421 NGHC-ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D Y+++I L K R + + L + M G+ P+ VTY SLI C LD+A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 300 AFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTY------- 348
DEM+Q+G SP I TY+ ++ RT E LL+ + + P TY
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNC 598
Query: 349 --------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ L+K F +V + + G + Y +IH G +E+A+
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM P T
Sbjct: 659 NLYKEMLHSGFAPHSVT 675
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLR-LFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G V+S++ I+ + + K+ +F +M G+ + YN +I ++
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ ME G PNVVTYN++I CK RK+ EA + M +G++P + +Y+ ++
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G+ E +LE M K P T+ LI + F + E+ +NG P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
+ +YT LI+++ G L A ++ +M+++ L P +T L D +++Q +Q +
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID-GFSQQGFLKQAYQI 400
Query: 439 KAHQPQSGQNTRVIS 453
++G +I+
Sbjct: 401 MKEMVENGFTPTIIT 415
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 35/311 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y T+I+ + ++ + A+ L EM P + T +L I+ C
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL---IQGLCKQR 497
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+G + F + L++A C ++ A L K P + ++
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP-DIVTY 556
Query: 176 NIILNGWCNIIGSSREAERVWM-----EMSQRGICYDVVSFSCIISCYSKARNLHKVL-- 228
N+++NG+ N ++EA+R+ + E I Y+ + +C + A L K
Sbjct: 557 NVLINGF-NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615
Query: 229 --------RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
R+ + M + G + + +VYN +IH +K ++ A +L K M G AP+ VT
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--------EEVFGL 332
+L K L K E Q D L+ + R A L + G + VF +
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLK-----SCRITEAALAKVLIGINSKEGNMDAVFNV 730
Query: 333 LESMRKMGCQP 343
L+ M G P
Sbjct: 731 LKDMALSGLLP 741
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 9/376 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG + + Y+ +I + EM P++VT T+ I YC +
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTI---IDAYCKLR 252
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFN 176
+G A + + +++ LCR +++ +E L +K + + +FN
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++NG+CN+ G+ +A + EM + G+ +VV+++ +I+ KA NL++ + DQM+
Sbjct: 313 TLINGYCNV-GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + + Y +I ++ +K A +MK M E G P ++TYN+LI C ++++
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
A EM++RG P + +Y + +E+ F L M G P TY LI+
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R+ G V ++ E+ G PD +YT+LI+A + G L++A + + EM +K P
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551
Query: 414 EPKTDELLQDWSYNKQ 429
+ T +L + +NKQ
Sbjct: 552 DIVTYNVLIN-GFNKQ 566
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 11/368 (2%)
Query: 56 GKQSGYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
K G+ Y+ ++ A++ + A + EM P++ T ILIR +C
Sbjct: 158 AKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYN---ILIRGFC 214
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
++ + F +R + + ++ A C+ + + +A L+ K + P N
Sbjct: 215 TAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNP-NL 273
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
S+N+++NG C G +E + EMS+R D V+F+ +I+ Y N H+ L L
Sbjct: 274 ISYNVVINGLCRE-GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M + G+ + Y +I+++ K + A+ + M ++G+ PN TY +LI +
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYI 349
L +A Q EM++ G +PTI TY+A ++ I+ E+ GLL+ M + G P +Y
Sbjct: 393 FLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYS 452
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I F R ++ F++ E+ G PD ++Y++LI L +L E + EM
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 410 QLLPEPKT 417
L P+ T
Sbjct: 513 GLPPDEVT 520
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 160/377 (42%), Gaps = 25/377 (6%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y ++T+I V F A L EM P++VT TL I C ++
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL---INSMCKAGNLN 360
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIIL 179
RA+ + + L+ + ++ A +M ++ F ++N ++
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C I+G +A + EM +RG DVVS+S IIS + + + L K +L +M GI
Sbjct: 421 NGHC-ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D Y+++I L K R + + L + M G+ P+ VTY SLI C LD+A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 300 AFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTY------- 348
DEM+Q+G SP I TY+ ++ RT E LL+ + + P TY
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNC 598
Query: 349 --------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ L+K F +V + + G + Y +IH G +E+A+
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM P T
Sbjct: 659 NLYKEMLHSGFAPHSVT 675
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLR-LFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G V+S++ I+ + + K+ +F +M G+ + YN +I ++
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ ME G PNVVTYN++I CK RK+ EA + M +G++P + +Y+ ++
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G+ E +LE M K P T+ LI + F + E+ +NG P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
+ +YT LI+++ G L A ++ +M+++ L P +T L D +++Q +Q +
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID-GFSQQGFLKQAYQI 400
Query: 439 KAHQPQSGQNTRVIS 453
++G +I+
Sbjct: 401 MKEMVENGFTPTIIT 415
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 35/311 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y T+I+ + ++ + A+ L EM P + T +L I+ C
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL---IQGLCKQR 497
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+G + F + L++A C ++ A L K P + ++
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP-DIVTY 556
Query: 176 NIILNGWCNIIGSSREAERVWM-----EMSQRGICYDVVSFSCIISCYSKARNLHKVL-- 228
N+++NG+ N ++EA+R+ + E I Y+ + +C + A L K
Sbjct: 557 NVLINGF-NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615
Query: 229 --------RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
R+ + M + G + + +VYN +IH +K ++ A +L K M G AP+ VT
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--------EEVFGL 332
+L K L K E Q D L+ + R A L + G + VF +
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLK-----SCRITEAALAKVLIGINSKEGNMDAVFNV 730
Query: 333 LESMRKMGCQP 343
L+ M G P
Sbjct: 731 LKDMALSGLLP 741
>gi|356514535|ref|XP_003525961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 317
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 140/254 (55%), Gaps = 3/254 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ K +N+ILNGWC ++G+ E +RVW ++ + +++ I +K L L+L
Sbjct: 53 DIKMWNVILNGWC-VLGNLHETKRVWRDIVASPCKPHIFTYATFIKALTKKGKLGTALKL 111
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F M G + D + N +I AL + + DA+ + M E+G PNV TY SLIK +CK
Sbjct: 112 FRGMWGKGGKPDVVICNCIIDALCFKKRIPDALEIFCDMSERGCEPNVATYKSLIKYICK 171
Query: 291 ARKLDEARQAFDEMLQRGIS--PTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
+++++ + DEM ++ S P + TY L ++ E+ +LE M + GC +D Y
Sbjct: 172 IQQMEKVYELVDEMEKKKGSCLPKVVTYCYLLKSLKEPGEICRVLERMERNGCGMNDDVY 231
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
M+++ + +W V K W E+ NG GPDR SYT +I F G++++A Y EM
Sbjct: 232 NMVLRLYMKWDDGDGVRKTWKEMERNGWGPDRRSYTIMILENFEKGRVKDAVCYLEEMIS 291
Query: 409 KQLLPEPKTDELLQ 422
K ++ EP+T +L+
Sbjct: 292 KGMVLEPRTKKLVS 305
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 181/384 (47%), Gaps = 50/384 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +IA + +K + A L++EMR P+LVT +L+ C + VG A +
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYN---VLVDALCKLSMVGAAQDVVK 238
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
FA + F L+ C+ NV DA L+ K + P N +++ +++G C
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP-NVVTYSALIDGLCK- 296
Query: 186 IGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S + EA+ V EM RG+ D ++S +I KA + + ++ +M G D
Sbjct: 297 --SQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 354
Query: 244 KVYNAVIHALAK-GRL----------------------------------VKDAISLMKS 268
VY+++IHA K G+L + +A +++
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQ 414
Query: 269 MEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M+E G V P+VVTY+++I LCK+ L EA++ D M + G +P + TY +D + + G
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE LL+ M++ GC P TY LI + R+ +V E+ G P+ +Y
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534
Query: 385 ALIHALFLNGKLEEAHQYYMEMKE 408
+++ L ++G+++EA Q MK+
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKD 558
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 59/349 (16%)
Query: 119 VGRAINAF----YAYKRFKFA-VGIEDF-------QGLLSALCRYKNVQDA------EHL 160
VGR +N+ A F++A I F LL L R K ++A E L
Sbjct: 46 VGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELL 105
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD------------- 207
C DV S+NI+++G+CN G A + EM G D
Sbjct: 106 ASCEPDVC-----SYNIVISGFCNA-GDLHAALELLEEMKSAGFAPDAFTHTPIITAMAN 159
Query: 208 -------------------VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
VV+++ +I+ +++A+ L + ++L ++M+ G + YN
Sbjct: 160 AGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++ AL K +V A ++K M E G APNV+T+NSL+ CK +D+AR+ M+ +G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279
Query: 309 ISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P + TY A +D + + E +LE M+ G P TY LI + +
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ ++ +G PD Y+++IHA +GKL EA + EM++++ P+
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 173/378 (45%), Gaps = 17/378 (4%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
D AA L K +G+A + +I + D A +D +R P++VT
Sbjct: 126 GDLHAALEL-LEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVT 181
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV---QDAEH 159
L+ R + A+ + + + L+ ALC+ V QD
Sbjct: 182 YTALIAAFAR---AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 238
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
M + F N +FN +++G+C G+ +A ++ M +G+ +VV++S +I
Sbjct: 239 KMI--EGGFAPNVMTFNSLVDGFCKR-GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 295
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K++ + + ++MK G+ D Y+A+IH L K +++A +++ M G P+VV
Sbjct: 296 KSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESM 336
Y+S+I CK+ KL EA++ EM ++ SP + TY+ +D + + G+ E +LE M
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415
Query: 337 RKMG-CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
++ G P TY +I + K+ + + + G PD +YT +I L G+
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Query: 396 LEEAHQYYMEMKEKQLLP 413
LEEA MK P
Sbjct: 476 LEEAEYLLQGMKRAGCAP 493
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 36/342 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K +KF A +++EM+ P T L I C + A
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL---IHGLCKADKIEEAEQMLR 343
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH-LMFCNKDVFPFNTKSFNIILNGWCNII 186
+ + ++ A C+ + +A+ L K + ++N +++G C +
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL- 402
Query: 187 GSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA+ + +M + G + DVV++S +I+ K+ L + +L D+M + G D
Sbjct: 403 GKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I L K +++A L++ M+ G APNVVTY +LI LCKARK+DEA + +EM
Sbjct: 463 YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 522
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
G P + TY+ ++ GL S R Q L+++ R
Sbjct: 523 NAGCPPNLVTYNTMVN---------GLCVSGRIKEAQ-------QLVQRMKDGRA----- 561
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
E S PD ++Y +++AL + ++EA Q +MK
Sbjct: 562 ----ECS-----PDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DV S++ +IS + A +LH L L ++MK G D + +I A+A + A+ +
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
+SM G PNVVTY +LI +A+KL
Sbjct: 171 RSM---GCDPNVVTYTALIAAFARAKKL-------------------------------- 195
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EE LLE MR+ GC P TY +L+ + G V ++ E G P+ ++ +L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ G +++A + M K + P T L+ +++F+E
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 10/236 (4%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N+++ L + + ++A L +S P+V +YN +I C A L A + +EM
Sbjct: 80 WNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK 139
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
G +P T+ + + ++ G ++ +R MGC P TY LI F+R ++
Sbjct: 140 SAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAM 199
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
K+ E+ E G P+ +Y L+ AL + A +M E P T L D
Sbjct: 200 KLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGF 259
Query: 426 YNKQFVERQ-----IASLKAHQPQSGQNTRVI-----SKKSDQDREFLQQPETRRV 471
+ V+ I K +P + +I S+K + +E L++ +TR V
Sbjct: 260 CKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
+ L K++G A + Y T+I+ L K RK D A +++EMR P+LVT T ++
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT---MV 537
Query: 111 RRYCAVHDVGRAINAFYAYK--RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
C + A K R + + ++ +++AL VQ+AE L+
Sbjct: 538 NGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 590
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 191/416 (45%), Gaps = 11/416 (2%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
L +L +F R ++R ++ +++ ++VL RN + FFL+A G+
Sbjct: 52 ALCRVLSDFRGPRHDLRAALDGFAPRLTPAAAADVLRRCRNLPVPSLRFFLFAAALPGFT 111
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H + L R F +L+ ++ P+L ++ +L R Y A
Sbjct: 112 HLPESLLILAGSLAGARLFPLLRSLLSDL----PRPAL-SRDLFPLLFRAYARAGLPDDA 166
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
I AF + +RF F + D LL L V+ AE + F + K++ I+++GW
Sbjct: 167 IRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSAKTYTILISGW 226
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIEC 241
++ +A++++ EM +RG+ DV +++ +I + ++ M+R G+
Sbjct: 227 A-VVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAP 285
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y + + + + A+ ++ M + + PNV TYN++I+ LC+ ++DEA
Sbjct: 286 DAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNIL 345
Query: 302 DEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM G P + +Y+ L+ ++ + L+ M + C P +Y M++K
Sbjct: 346 NEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAI 405
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLLP 413
+ +VW+ + + G P ++Y +IH L G+ EEA Y++ M + + P
Sbjct: 406 GRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPP 461
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 196/423 (46%), Gaps = 18/423 (4%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+M +++ + +++ +V ++L ++ + + AF FF WAG Q Y+H Y+ MI IL
Sbjct: 8 DDMEKALDDSVVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 67
Query: 76 G----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
K ++F ++D M+ + ++V LL ++R+YC + + F KR
Sbjct: 68 SSTKYKNKQFRIVIDMLDYMKRNKK--TVVPADILLEILRKYCERYLTH--VQKFAKRKR 123
Query: 132 FKFAVG--IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ I F LL ALC+ V++ E L+ + + +FN++ GWC +
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRV-RDP 182
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVY 246
++A ++ EM Q G + ++ I + +A + + LF+ M G K +
Sbjct: 183 KKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTF 242
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I ALAK ++ L+ M G P+V TY +I+ +C A K++EA + DEM
Sbjct: 243 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSN 302
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P I TY+ FL ++ R +E L M + C P+ TY MLI F
Sbjct: 303 KGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 362
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQ 422
F W E+ E D +Y +I+ LF + +EA E+ K L LP D L
Sbjct: 363 AFNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLM 422
Query: 423 DWS 425
S
Sbjct: 423 RLS 425
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 179/386 (46%), Gaps = 16/386 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E+ ++ + LV VL + N A FF YAH + + I I G++R +
Sbjct: 58 LEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDY 117
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
T W L+D MR GP+ +T I+ RY + RAI F++ + F
Sbjct: 118 KTLWTLVDRMRTRRLGPN---PKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSF 174
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
+L LC+ K V+ A++ +F VF F I+L G+ G +EA +++M +
Sbjct: 175 NTILDVLCKSKRVEMADNKLF---KVF---RGRFRILLKGFFRA-GQLKEAWEFFLQMKK 227
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
R DVV+++ ++ + A + K R+F++M G+ YNA I L K V++
Sbjct: 228 RKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVEN 287
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
AIS+ + M KG PN TYN +I+ LC ++++A + M P ++ Y+ +
Sbjct: 288 AISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIR 347
Query: 322 IIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKK-FSRWRQ--FGNVFKVWNEISENG 375
EE+ L KMG C P DTY +LI F R + K+ E+ E G
Sbjct: 348 YFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERG 407
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQ 401
P + ++ ++ L L G + A +
Sbjct: 408 FLPRKFTFNRVLDGLLLTGNQDFAKE 433
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF I + R+ + L D+M+ + + K + + AI + SM
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE-- 327
E G ++ ++N+++ LCK+++++ A ++ + ++ + R G+
Sbjct: 163 HEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRFRILLKGF------FRAGQLK 216
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + M+K C+ TY ++ F + +V+NE+ G P ++Y A I
Sbjct: 217 EAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFI 276
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L +E A + EM K +P T
Sbjct: 277 QVLCKKDNVENAISVFEEMLRKGYMPNSTT 306
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 9/212 (4%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++ I + R K +L+ M + + PN T+ + + A K D A + F M
Sbjct: 104 FDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMH 163
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ G + +++ LD++ + V E + + +L+K F R Q +
Sbjct: 164 EHGCVQDLNSFNTILDVLCKSKRV----EMADNKLFKVFRGRFRILLKGFFRAGQLKEAW 219
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+ + ++ + D +YT ++H + G++ +A + + EM + +LP T
Sbjct: 220 EFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVL 279
Query: 426 YNKQFVERQIASL-----KAHQPQSGQNTRVI 452
K VE I+ K + P S VI
Sbjct: 280 CKKDNVENAISVFEEMLRKGYMPNSTTYNVVI 311
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 177/391 (45%), Gaps = 7/391 (1%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI ++ ++VSEV++ EA FF WA KQ Y+ +I LG+ + +
Sbjct: 86 GIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVV 145
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
++ +M P+ +TL I++ + V +AI F + F E LL
Sbjct: 146 KVLKDMHIQGISPNY---ETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLL 202
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ +V A K PFN ++NII+ GW G E ER M G
Sbjct: 203 QCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKY-GKIGEMERCLKAMVADGFS 261
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ ++FS +I +A + + +F M+ G + VYNA+I R + +
Sbjct: 262 PNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKY 321
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
M PN+ TY LI KARK+ +A + DEM+ RG+ PT +F++ + +
Sbjct: 322 YNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQ 381
Query: 325 TGEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G ++ + RK+GC+ + Y +L+ + SR+ + G + +W+E+ E+G D
Sbjct: 382 YGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEV 441
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
Y +I+ L G+L+ A E K P
Sbjct: 442 YEYVINGLCNIGQLDTAVLVMEESLHKGFCP 472
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 12/226 (5%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ Q I DV +++ II + + + V+++ M GI + + + V+ + K R
Sbjct: 116 VKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQ 175
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V AI + +++EE G + + N L++ LC+ + A F+ M + GI TY
Sbjct: 176 VSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAM-KGGIPFNCMTY-- 232
Query: 319 FLDIIRTGEEVFG-------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+II G +G L++M G P T+ LI+ R + + +V++ +
Sbjct: 233 --NIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHM 290
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E G P+ Y ALI +E +YY M P T
Sbjct: 291 EETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDT 336
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 11/253 (4%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILI 110
L A G++ + + +I LG+ + D A + M ETG P+ L I
Sbjct: 252 LKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHME--ETGCVPNACVYNAL---I 306
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVF 168
+ + D + + ++ + L+ A + + V DA ++ + +
Sbjct: 307 SNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMI 366
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P T + + C G A ++ + + G + ++ ++ S+ +L
Sbjct: 367 P-TTGAITSFIEPLCQY-GPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLL 424
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L+D+M+ G D +VY VI+ L + A+ +M+ KG P+ + + L L
Sbjct: 425 NLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLHKGFCPSRLIRSKLNNKL 484
Query: 289 CKARKLDEARQAF 301
+ K++ A + F
Sbjct: 485 LASNKVEMAYKLF 497
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 120/315 (38%), Gaps = 35/315 (11%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K EM +EE G K +E ++ +L + R+ AA FF + G + Y+ +
Sbjct: 178 KAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFF--NAMKGGIPFNCMTYNII 235
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I K K + M P+ +T L+ + R + D A+ F+ +
Sbjct: 236 IGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDD---AVEVFHHMEE 292
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN------- 184
G + C Y +A F + F K +N +++ C+
Sbjct: 293 ----------TGCVPNACVY----NALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYT 338
Query: 185 -----IIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+ + + A+ + M EM RG+ + + I + H + ++ + +++
Sbjct: 339 KLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKV 398
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G Y ++ L++ ++L M+E G + + Y +I LC +LD A
Sbjct: 399 GCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTA 458
Query: 298 RQAFDEMLQRGISPT 312
+E L +G P+
Sbjct: 459 VLVMEESLHKGFCPS 473
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 7/368 (1%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A FF WA G+ HS + Y+ MI + GKV++F AW LID M+ +T T
Sbjct: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVE---ITVVTFS 187
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
+L+RRY A++AF + + I F ++S LC+ + +A+ K
Sbjct: 188 MLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK 247
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + +++GWC G EAE V+ EM GI +V ++S +I ++ + +
Sbjct: 248 FEPDVIVYTSLVHGWCR-AGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRA 306
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F +M G + +N +I + + + + M+ A +++TYN LI+
Sbjct: 307 HDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIET 366
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPT 344
CK L EA + + M + +P +++ I ++V G + M+++GC+P
Sbjct: 367 HCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPN 426
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +L++ F+ + +FK+ E+ E P+ ++Y LI G A+ ++
Sbjct: 427 TVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFR 486
Query: 405 EMKEKQLL 412
EM +++ +
Sbjct: 487 EMIDEKCI 494
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + EA + M G D+++FS +IS K R + FD +K E D VY
Sbjct: 197 GLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH-KFEPDVIVY 255
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+++H + + +A S+ + M+ G++PNV TY+ +I LC++ ++ A F EML
Sbjct: 256 TSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLD 315
Query: 307 RGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G +P T++ + + +R G E+V + M+++ C TY LI+ + G
Sbjct: 316 AGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGE 375
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
KV N +++N P+ SS+ + + + + AH+ + MKE P T +L
Sbjct: 376 AIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 121/318 (38%), Gaps = 83/318 (26%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I+IL K R+ A + D ++ + P ++ +L + +C D+ A + F
Sbjct: 221 FSNVISILCKKRRAVEAQSFFDNLKH-KFEPDVIVYTSL---VHGWCRAGDISEAESVFR 276
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTK------- 173
K + + + ++ ALCR + A H +F CN + FN
Sbjct: 277 EMKMAGISPNVYTYSIVIDALCRSGQITRA-HDVFAEMLDAGCNPNSVTFNNLIRVHLRA 335
Query: 174 -----------------------SFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDV 208
++N ++ C + +G EA +V M++ +
Sbjct: 336 GRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLG---EAIKVLNSMAKNDCTPNA 392
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
SF+ I C +K+++++ R+F +MK +G + + YN ++ A + L K
Sbjct: 393 SSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKE 452
Query: 269 MEEKGVAPNVVTYNSLIKPLC------------------------------------KAR 292
M+E+ V PN TY LI C KA
Sbjct: 453 MDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAG 512
Query: 293 KLDEARQAFDEMLQRGIS 310
+L + + D+M++RG +
Sbjct: 513 QLKKHEELVDKMVERGFA 530
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 13/400 (3%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + + +SS L+ V+ R D A + A + G A S T +
Sbjct: 57 SAMESALAASAVSLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGIAPSPYAIDTAL 116
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ R P +T +T +I++ R V V + +F R
Sbjct: 117 YVLGRARRFPHMWNLVANTR--RICPDALTPRTAMIVLGRVAKVCSVRETVASFRCLARL 174
Query: 133 KFAVGIED-FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
V F LL LC+ K++ DA ++ K F N +FNI+L+GW S+ +
Sbjct: 175 FHTVDPAVLFNALLRTLCQEKSMSDARNVFHALKYEFRVNRHTFNILLSGW----KSAED 230
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE EM + G+ D+V+++ +I C+ K R++ K +L D+M+ I D Y ++I
Sbjct: 231 AEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSLIG 290
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L A L+K M E G P+V YN+ I+ A++L +A D+M+ +G+ P
Sbjct: 291 GLGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMP 350
Query: 312 TIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY+ F ++ + L E MR GC P + + +I+ R+ + ++W
Sbjct: 351 NPTTYNLFFRCYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIRLCHRYGKVALALELW 410
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+++ + G L+ L GKLE+A + + +M E
Sbjct: 411 SDMVSSSFGSLTLVSDVLLDLLCDEGKLEDAERCFCQMVE 450
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 54/231 (23%)
Query: 208 VVSFSCIISCY---SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-----------L 253
V SF C+ + A + +LR Q K M R V++A+ + L
Sbjct: 165 VASFRCLARLFHTVDPAVLFNALLRTLCQEKSMSDA--RNVFHALKYEFRVNRHTFNILL 222
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ + +DA + + M E GV P++VTYNSLI CK R + +A + DEM + ISP I
Sbjct: 223 SGWKSAEDAEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDI 282
Query: 314 RTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY + L +I ++ LL+ M ++GC
Sbjct: 283 ITYTSLIGGLGLIGQPDKAKDLLKEMYELGCY---------------------------- 314
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
PD +Y A I + +L +A +M K L+P P T L
Sbjct: 315 -------PDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTTYNLF 358
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 181/366 (49%), Gaps = 12/366 (3%)
Query: 56 GKQSGYAHSTREYHTMIAILGKVRKFD--TAWALIDEMRGGETGPSLVTKQTLLILIRRY 113
K SG+ Y++++ + + R +A + EM P++ T ILIR +
Sbjct: 168 AKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYN---ILIRGF 224
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
C+V ++ + + F +R + + L+ A C+ + +A L+ +K + P N
Sbjct: 225 CSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQP-N 283
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N+I+NG C GS +EA + EM +G D V+++ +++ Y K N H+ L +
Sbjct: 284 LISYNVIINGLCR-EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIH 342
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M R G+ Y A+I+++ K R + A+ M +G+ PN TY +LI +
Sbjct: 343 AEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 402
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTY 348
L+EA + +EM + G SP++ TY+AF+ ++ EE G+++ M + G P +Y
Sbjct: 403 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSY 462
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+I F R + F++ E+ E G PD +Y++LI L +L EA EM +
Sbjct: 463 STIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 522
Query: 409 KQLLPE 414
L P+
Sbjct: 523 MGLPPD 528
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 178/371 (47%), Gaps = 9/371 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I V + EM P++VT TL I YC + + A
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL---IDAYCKMGRIDEAFGLLK 273
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ + + +++ LCR ++++A E L F + ++N +LNG+C
Sbjct: 274 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE- 332
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G+ +A + EM + G+ VV+++ +I+ KARNL++ + FDQM+ G+ + + Y
Sbjct: 333 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 392
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I ++ L+ +A ++ M E G +P+VVTYN+ I C +++EA EM++
Sbjct: 393 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 452
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G++P + +Y + R GE F + + M + G P TY LI+ R+
Sbjct: 453 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 512
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ + G PD +YT LI+A + G L +A + EM K LP+ T +L +
Sbjct: 513 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLIN 572
Query: 424 WSYNKQFVERQ 434
NKQ R+
Sbjct: 573 -GLNKQARTRE 582
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 31/364 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + S Y +I + K R + A D+MR P+ T TL+ R ++
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ R +N F+ + + + C + +++A ++ K + P + S+
Sbjct: 407 EAYRILNEM---TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP-DVVSY 462
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ I++G+C G A ++ EM ++G+ D V++S +I + R L + L +M
Sbjct: 463 STIISGFCRK-GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
MG+ D Y +I+A + A+ L M KG P+ VTY+ LI L K +
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 581
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---------------------IIRTGEEVFGLLE 334
EA++ +++ P+ TY ++ ++ + VF E
Sbjct: 582 EAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF---E 638
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
SM + +P Y ++I R F ++ E+ +G P + LI ALF G
Sbjct: 639 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698
Query: 395 KLEE 398
EE
Sbjct: 699 MNEE 702
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR---KLDEARQAF 301
V++ ++ + + ++ A++ + + G P V++YNS++ + ++R KL A + +
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS-AEEVY 202
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
EM++ +SP + TY+ + GE + G M + GC P TY LI + +
Sbjct: 203 REMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKM 262
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT- 417
+ F + +S G P+ SY +I+ L G ++EA + EM K P+ T
Sbjct: 263 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 322
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ LL + F Q + A ++G + V++
Sbjct: 323 NTLLNGYCKEGNF--HQALVIHAEMVRNGVSPSVVT 356
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R + + AF FF WA +Q GY+H Y+ +I IL K
Sbjct: 99 LDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYK 158
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ G V + LL ++R Y H A R +
Sbjct: 159 SRQFGVLCNVLDHMK--RHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE 216
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++ + GWC ++A +V
Sbjct: 217 TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRA-RDPKKAMKVLE 275
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + ++ I + A + + LF+ M+ G+ K Y+ +I ALA
Sbjct: 276 EMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALA 335
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M G P+V TY LI+ +C +LD A + DEM + G P I
Sbjct: 336 KADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIV 395
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL++ +R ++ L E M + C+P+ TY ML+ F + +W E+
Sbjct: 396 TYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEM 455
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G +Y +I+ LF G+ E A
Sbjct: 456 DKRGCQRAIDTYEIMIYGLFDCGETEYA 483
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C DV ++ ++ G C ++G A RV EM + G D+V+++C ++ R
Sbjct: 355 CMPDV-----TTYKDLIEGMC-LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLR 408
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N L L ++M E YN ++ + A+ + M+++G + TY
Sbjct: 409 NADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYE 468
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRK 338
+I L + + A DE++ R + + + + A L + + L E MRK
Sbjct: 469 IMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHMRK 527
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 179/375 (47%), Gaps = 9/375 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I V + EM P++VT TL I YC + + A
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL---IDAYCKMGRIDEAFGLLK 69
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ + + +++ LCR ++++A E L F + ++N +LNG+C
Sbjct: 70 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE- 128
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G+ +A + EM + G+ VV+++ +I+ KARNL++ + FDQM+ G+ + + Y
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I ++ L+ +A ++ M E G +P+VVTYN+ I C +++EA EM++
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G++P + +Y + R GE F + + M + G P TY LI+ R+
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 308
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ + G PD +YT LI+A + G L +A + EM K LP+ T +L +
Sbjct: 309 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLIN 368
Query: 424 WSYNKQFVERQIASL 438
NKQ R+ L
Sbjct: 369 -GLNKQARTREAKRL 382
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T ILIR +C+V ++ + + F +R + + L+ A C+ + +A L+
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+K + P N S+N+I+NG C GS +EA + EM +G D V+++ +++ Y K
Sbjct: 72 SSKGMQP-NLISYNVIINGLCR-EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N H+ L + +M R G+ Y A+I+++ K R + A+ M +G+ PN TY
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKM 339
+LI + L+EA + +EM + G SP++ TY+AF+ ++ EE G+++ M +
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P +Y +I F R + F++ E+ E G PD +Y++LI L +L EA
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Query: 400 HQYYMEMKEKQLLPE 414
EM + L P+
Sbjct: 310 CDLSQEMLDMGLPPD 324
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++NI++ G+C+ +G ++ + EM + G +VV+++ +I Y K + + L
Sbjct: 9 NVYTYNILIRGFCS-VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M G++ + YN +I+ L + +K+A +++ M KG P+ VTYN+L+ CK
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
+A EM++ G+SP++ TY A ++ + R + MR G +P T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI FSR +++ NE++E+G P +Y A IH + ++EEA EM
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 408 EKQLLPE 414
EK L P+
Sbjct: 248 EKGLAPD 254
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 154/367 (41%), Gaps = 31/367 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + S Y +I + K R + A D+MR P+ T TL+ R ++
Sbjct: 143 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 202
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ R +N F+ + + + C + +++A ++ K + P + S+
Sbjct: 203 EAYRILNEM---TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP-DVVSY 258
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ I++G+C G A ++ EM ++G+ D V++S +I + R L + L +M
Sbjct: 259 STIISGFCRK-GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 317
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
MG+ D Y +I+A + A+ L M KG P+ VTY+ LI L K +
Sbjct: 318 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 377
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---------------------IIRTGEEVFGLLE 334
EA++ +++ P+ TY ++ ++ + VF E
Sbjct: 378 EAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF---E 434
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
SM + +P Y ++I R F ++ E+ +G P + LI ALF G
Sbjct: 435 SMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 494
Query: 395 KLEEAHQ 401
EE +
Sbjct: 495 MNEEMSE 501
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVF 330
V+PNV TYN LI+ C +L + F EM + G P + TY+ +D + G +E F
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
GLL+SM G QP +Y ++I R +++ E+ G PD +Y L++
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
G +A + EM + P
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSP 148
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 187/418 (44%), Gaps = 45/418 (10%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+R + ++ + ELV +VL + A FF YAHS + I I G+
Sbjct: 65 LRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGR 124
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+R + T WAL+ MR GPS +T I+ R+ A RAI F + +
Sbjct: 125 MRDYKTVWALVARMRARRIGPS---SKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQD 181
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ F +L LC+ K V+ A + +F + F + S+NII NGWC +I + +A V
Sbjct: 182 LHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWC-LIKRTPKALEVL 240
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD-------------- 242
EM +RG+ + +++ ++ Y +A L + F QMK +E D
Sbjct: 241 KEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVV 300
Query: 243 ------RKV---------------YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
RKV YNA+I L K V++A+ + + M +KG PN+ TY
Sbjct: 301 GEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTY 360
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-- 339
N +I+ L A +D+A + + M G P ++TY+ + +V L KM
Sbjct: 361 NVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ 420
Query: 340 GCQPTNDTYIMLIKK-FSRWRQFGNVF--KVWNEISENGNGPDRSSYTALIHALFLNG 394
G P DTY +LI F R + V K+ E+ + G P + ++ +++ L L G
Sbjct: 421 GSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTG 478
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 6/240 (2%)
Query: 184 NIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+I G R+ + VW M R I +F+ I + A + +++F M+ G
Sbjct: 120 DIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCP 179
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +N ++ L K + V+ A + + + +VV+YN + C ++ +A +
Sbjct: 180 QDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEV 239
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
EM++RG++PTI TY+ L R G+ E + M++ + TY ++ F
Sbjct: 240 LKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGV 299
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ KV+NE+ G P ++Y A+I L +E A + EM +K +P T
Sbjct: 300 VGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTT 359
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF I + R+ V L +M+ I K + + AI + SM
Sbjct: 114 SFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSM 173
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTG 326
E G ++ ++N+++ LCK+++++ A ++L+ + +Y+ + +I+
Sbjct: 174 REHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRT 233
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ +L+ M + G PT TY +L+K + R Q ++ + ++ E D +YT +
Sbjct: 234 PKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTM 293
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+H + G+++ A + + EM + +LP T
Sbjct: 294 VHGFGVVGEIKRARKVFNEMVGEGILPSTAT 324
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 176/381 (46%), Gaps = 44/381 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +IA + +K + A L++EMR P+LVT +L+ C + VG A +
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYN---VLVDALCKLSMVGAAQDVVK 116
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN- 184
FA + F L+ C+ NV DA L+ K + P N +++ +++G C
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP-NVVTYSALIDGLCKS 175
Query: 185 ----------------------------IIGSSR-----EAERVWMEMSQRGICYDVVSF 211
I G + EAE++ M+ G DVV +
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S II + K+ L + + +M++ D YN VI L K + +A ++ M+E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Query: 272 KG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--E 327
G V P+VVTY+++I LCK+ L EA++ D M + G +P + TY +D + + G E
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E LL+ M++ GC P TY LI + R+ +V E+ G P+ +Y ++
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415
Query: 388 HALFLNGKLEEAHQYYMEMKE 408
+ L ++G+++EA Q MK+
Sbjct: 416 NGLCVSGRIKEAQQLVQRMKD 436
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 173/378 (45%), Gaps = 17/378 (4%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
D AA L K +G+A + +I + D A +D +R P++VT
Sbjct: 4 GDLHAALEL-LEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVT 59
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV---QDAEH 159
L+ R + A+ + + + L+ ALC+ V QD
Sbjct: 60 YTALIAAFAR---AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
M + F N +FN +++G+C G+ +A ++ M +G+ +VV++S +I
Sbjct: 117 KMI--EGGFAPNVMTFNSLVDGFCKR-GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K++ + + ++MK G+ D Y+A+IH L K +++A +++ M G P+VV
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESM 336
Y+S+I CK+ KL EA++ EM ++ SP + TY+ +D + + G+ E +L+ M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293
Query: 337 RKMG-CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
++ G P TY +I + K+ + + + G PD +YT +I L G+
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353
Query: 396 LEEAHQYYMEMKEKQLLP 413
LEEA MK P
Sbjct: 354 LEEAEYLLQGMKRAGCAP 371
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+VV+++ +I+ +++A+ L + ++L ++M+ G + YN ++ AL K +V A ++
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
K M E G APNV+T+NSL+ CK +D+AR+ M+ +G+ P + TY A +D +
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 327 E---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ E +LE M+ G P TY LI + + ++ ++ +G PD Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++IHA +GKL EA + EM++++ P+
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 36/341 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K +KF A +++EM+ P T L I C + A
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSAL---IHGLCKADKIEEAEQMLR 221
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH-LMFCNKDVFPFNTKSFNIILNGWCNII 186
+ + ++ A C+ + +A+ L K + ++N +++G C +
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL- 280
Query: 187 GSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA+ + +M + G + DVV++S +I+ K+ L + +L D+M + G D
Sbjct: 281 GKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 340
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I L K +++A L++ M+ G APNVVTY +LI LCKARK+DEA + +EM
Sbjct: 341 YTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 400
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
G P + TY+ ++ GL S R Q L+++ R
Sbjct: 401 NAGCPPNLVTYNTMVN---------GLCVSGRIKEAQ-------QLVQRMKDGRA----- 439
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
E S PD ++Y +++AL + ++EA Q +M
Sbjct: 440 ----ECS-----PDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 221 ARNLHKVLRLFDQMKRMG------------------------------IECDRKV--YNA 248
A +LH L L ++MK G + CD V Y A
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTA 62
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I A A+ + +++A+ L++ M E+G PN+VTYN L+ LCK + A+ +M++ G
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 309 ISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+P + T+++ +D + G ++ LL M G +P TY LI + ++F
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+V E+ +G PD +Y+ALIH L K+EEA Q M P+
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
C A L A + +EM G +P T+ + + ++ G ++ +R MGC P TY
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI F+R ++ K+ E+ E G P+ +Y L+ AL + A +M E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 409 KQLLPEPKTDELLQDW 424
P T L D
Sbjct: 121 GGFAPNVMTFNSLVDG 136
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
+ L K++G A + Y T+I+ L K RK D A +++EMR P+LVT T ++
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT---MV 415
Query: 111 RRYCAVHDVGRAINAFYAYK--RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
C + A K R + + ++ +++AL VQ+AE L+
Sbjct: 416 NGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 468
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 176/391 (45%), Gaps = 7/391 (1%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI ++ ++VSEV + EA FF WA KQ Y+ +I LG+ + +
Sbjct: 127 GIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXV 186
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
++ +M P+ +TL I++ + V +AI F + F E LL
Sbjct: 187 XVLKDMHIQGISPNY---ETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLL 243
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ +V A K PFN ++NII+ GW G E ER M G
Sbjct: 244 QCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKY-GKIGEMERCLKAMVADGFS 302
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ ++FS +I +A + + +F M+ G + VYNA+I R + +
Sbjct: 303 PNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKY 362
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
M PN+ TY LI KARK+ +A + DEM+ RG+ PT +F++ + +
Sbjct: 363 YNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQ 422
Query: 325 TGEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G ++ + RK+GC+ + Y +L+ + SR+ + G + +W+E+ E+G D
Sbjct: 423 YGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEV 482
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
Y +I+ L G+L+ A E K P
Sbjct: 483 YEYVINGLCNIGQLDTAVLVMEESLXKGFCP 513
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 12/224 (5%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q I DV +++ II + + + + + M GI + + + V+ + K R V
Sbjct: 159 QPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQVS 218
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
AI + +++EE G + + N L++ LC+ + A F+ M + GI TY
Sbjct: 219 KAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAM-KGGIPFNCMTY---- 273
Query: 321 DIIRTGEEVFG-------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+II G +G L++M G P T+ LI+ R + + +V++ + E
Sbjct: 274 NIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEE 333
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G P+ Y ALI +E +YY M P T
Sbjct: 334 TGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDT 377
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 99/246 (40%), Gaps = 11/246 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAVH 117
G++ + + +I LG+ + D A + M ETG P+ L I + +
Sbjct: 300 GFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHME--ETGCVPNACVYNAL---ISNFISTR 354
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D + + ++ + L+ A + + V DA ++ + + P T +
Sbjct: 355 DFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIP-TTGAI 413
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ C G A ++ + + G + ++ ++ S+ +L L+D+M+
Sbjct: 414 TSFIEPLCQY-GPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQ 472
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D +VY VI+ L + A+ +M+ KG P+ + + L L + K++
Sbjct: 473 ESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSKLNNKLLASNKVE 532
Query: 296 EARQAF 301
A + F
Sbjct: 533 MAYKLF 538
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 120/315 (38%), Gaps = 35/315 (11%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K EM +EE G K +E ++ +L + R+ AA FF + G + Y+ +
Sbjct: 219 KAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFF--NAMKGGIPFNCMTYNII 276
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I K K + M P+ +T L+ + R + D A+ F+ +
Sbjct: 277 IGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDD---AVEVFHHMEE 333
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN------- 184
G + C Y +A F + F K +N +++ C+
Sbjct: 334 ----------TGCVPNACVY----NALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYT 379
Query: 185 -----IIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+ + + A+ + M EM RG+ + + I + H + ++ + +++
Sbjct: 380 KLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKV 439
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G Y ++ L++ ++L M+E G + + Y +I LC +LD A
Sbjct: 440 GCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTA 499
Query: 298 RQAFDEMLQRGISPT 312
+E L +G P+
Sbjct: 500 VLVMEESLXKGFCPS 514
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 182/369 (49%), Gaps = 14/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G P++V T+ I C V V
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI---IDSMCKVKLV 241
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSF 175
A + F + + + L+S C + DA L NK ++ P + +F
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF--NKMILENIKP-DVYTF 298
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++N +C G +E + V+ M ++GI + V+++ ++ Y + ++K +F+ M
Sbjct: 299 NILVNAFCKD-GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ D + Y+ +I+ K + +A++L K M K + P+VVTY+SLI L K+ ++
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A Q D+M RG+ PTIRTY++ LD I ++ LL ++ G QP TY +LI
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K + + + KV+ + G+ + +YT +I + G EA +M++ +
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 413 PEPKTDELL 421
P+ KT E++
Sbjct: 538 PDAKTYEII 546
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 179/389 (46%), Gaps = 17/389 (4%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E++ ++ L K + + T L +M P+LV ILI +C + + A + F
Sbjct: 87 EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN---ILINCFCQLGLIPFAFSVF 143
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + F L+ LC +Q A +F +K V F F+ S+ +++G C
Sbjct: 144 AKILKMGYVPDTITFTTLIKGLCLKGQIQQA--FLFHDKVVALGFHFDQISYGTLIHGLC 201
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+G +R A + + + +VV ++ II K + +++ LF +M GI D
Sbjct: 202 K-VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDV 260
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+A+I + DAI L M + + P+V T+N L+ CK K+ E + FD
Sbjct: 261 VTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320
Query: 304 MLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M+++GI P TY++ +D +++ + + +M + G P +Y ++I F + ++
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
F ++ E+ PD +Y++LI L +G++ A Q +M ++ + P +T
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440
Query: 421 LQDWSYNKQFVERQIASL-----KAHQPQ 444
+ D V++ IA L K QP
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 43/324 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I + KV+ + A+ L EM P +VT L I +C + + AI+ F
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL---ISGFCILGKLNDAIDLFN 284
Query: 128 AYKRFKFAVGIEDFQGLLSALCR-------------------------YKNVQDAEHLMF 162
+ F L++A C+ Y ++ D L+
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 163 -CNKDVFPFNT----------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
NK FNT +S++I++NG+C I EA ++ EM ++ I DVV++
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI-KKFDEAMNLFKEMHRKNIIPDVVTY 403
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S +I SK+ + L+L DQM G+ + YN+++ AL K V AI+L+ +++
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEE 328
KG+ PN+ TY+ LIK LC++ KL++AR+ F+ +L +G + + TY + + E
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 329 VFGLLESMRKMGCQPTNDTYIMLI 352
LL M GC P TY ++I
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIII 547
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 38/254 (14%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y MI K++KFD A L EM P +VT +L
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL----------- 406
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
I+ R +A+ + D + D P +++N
Sbjct: 407 -----IDGLSKSGRISYALQLVD------------QMHDRG---------VPPTIRTYNS 440
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
IL+ C I +A + ++ +GI ++ ++S +I ++ L ++F+ +
Sbjct: 441 ILDALCK-IHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + Y +I L +A++L+ ME+ G P+ TY +I L K + D A
Sbjct: 500 GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Query: 298 RQAFDEMLQRGISP 311
+ EM+ RG+ P
Sbjct: 560 EKLLREMIARGVRP 573
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 38/253 (15%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+ +S+S + + ++ + LF+++ R +N ++ +L K + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY---------- 316
+ ME +G+ PN+V N LI C+ + A F ++L+ G P T+
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 317 ----HAFL------------DIIRTGEEVFGL---------LESMRKMG---CQPTNDTY 348
AFL D I G + GL L+ ++++ QP Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+I + + F +++E+ G PD +Y+ALI + GKL +A + +M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 409 KQLLPEPKTDELL 421
+ + P+ T +L
Sbjct: 289 ENIKPDVYTFNIL 301
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 181/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R D + AF FF+WA Q GY H Y+ +I IL K
Sbjct: 103 LDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGTRYK 162
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ T V LL ++R Y H A R +
Sbjct: 163 ARQFGVLCDVLDHMKRRRTRS--VPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPPE 220
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++I+ GWC R A +V
Sbjct: 221 TDALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKR-AMKVLE 279
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + +++ I + A + + LF+ M+ G K Y+ +I ALA
Sbjct: 280 EMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALA 339
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M + G P+V TY LI+ + KLD A DEM + G P I
Sbjct: 340 KAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIV 399
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL + ++ ++ L E M + C+P+ TY ML+ F R+ +W E+
Sbjct: 400 TYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEM 459
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G +Y +I LF +G+ E+A
Sbjct: 460 DKRGCHRAVDTYETMIDGLFDSGRTEDA 487
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 183/371 (49%), Gaps = 13/371 (3%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQT 105
+ FF W+ G+ S Y+ M+ + GK+R+FD AW +ID M RG E +T T
Sbjct: 161 SLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVE-----ITVHT 215
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L+RRY A++AF + + + F ++S+LC+ + +A+ K
Sbjct: 216 FSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLK 275
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
F + + +++GWC G +AE V+ +M GI +V ++S +I + +
Sbjct: 276 HRFEPDVVVYTSLVHGWCR-AGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQIT 334
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +F +M G + + +N+++ K + + + M+ G + ++YN +I
Sbjct: 335 RAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFII 394
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQ 342
+ C+ L+EA + + M+++G++P T++ I +V G + M+++ CQ
Sbjct: 395 ESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQ 454
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL-EEAHQ 401
P TY +L++ F+ R V K+ E+ E+ P+ ++Y LI ++F + K A++
Sbjct: 455 PNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILI-SMFCDMKHWNNAYK 513
Query: 402 YYMEMKEKQLL 412
MEM E++ L
Sbjct: 514 LMMEMVEEKCL 524
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + EA + M G D+V+FS +IS K R ++ FD +K E D VY
Sbjct: 227 GLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVY 285
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+++H + + A + M+ G+ PNV TY+ +I LC+ ++ A F EM+
Sbjct: 286 TSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMID 345
Query: 307 RGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G P T+++ + + ++ G E+V + M+++GC +Y +I+ R
Sbjct: 346 AGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEE 405
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+ N + + G P+ S++ + + + AH+ Y MKE P T +L
Sbjct: 406 AAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNIL 463
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
YN ++ K R+ D A D M RG+ T+ T+ A + +R G E M
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC P + ++I + R+ ++ + PD YT+L+H G +
Sbjct: 241 DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFE-PDVVVYTSLVHGWCRAGDIS 299
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
+A + + +MK + P T ++ D
Sbjct: 300 KAEEVFSDMKMAGIKPNVYTYSIVID 325
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 181/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R + + AF FF WA Q GY+H + Y+ +I IL K
Sbjct: 99 LDALGTELTTPLVADVLHRLRYEEKLAFRFFAWASHQDGYSHESATYNDIIDILSGTRYK 158
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ G V + LL ++R Y H A R +
Sbjct: 159 SRQFGVLCNVLDHMK--RHGTRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRLRTPPE 216
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++I+ GWC ++A +V
Sbjct: 217 TDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRA-RDPKKAMKVLE 275
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + ++ I + A + + LF+ M+ G K Y+ +I ALA
Sbjct: 276 EMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALA 335
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M G P+V TY LI+ +C KLD A + +EM + G P I
Sbjct: 336 KADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPDIV 395
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL++ +R ++ L E M + C+P+ TY ML+ F + +W E+
Sbjct: 396 TYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWLEM 455
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
G +Y +I LF GK E A
Sbjct: 456 DTRGCQRAIDTYEIMIDGLFDCGKTEHA 483
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ ++ ++ G C ++G A RV EM + G D+V+++C ++ R L L
Sbjct: 358 DVSTYKELIEGMC-LVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALEL 416
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M E YN ++ + A+ + M+ +G + TY +I L
Sbjct: 417 CERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWLEMDTRGCQRAIDTYEIMIDGLFD 476
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
K + A DE++ R + + + + A +
Sbjct: 477 CGKTEHATSLLDEVINRDMKLSYKKFDAIM 506
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 9/194 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ + Y MI L K + + + L+ +MR P + T + L I C V + A
Sbjct: 323 TAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKEL---IEGMCLVGKLDAAY 379
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF---NTKSFNIILN 180
R F I + L+ LC + DA L C + + + ++N+++
Sbjct: 380 RVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDA--LELCERMIEAHCEPSVHTYNMLMV 437
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ + G + A +W+EM RG + ++ +I L D++ ++
Sbjct: 438 MFFEM-GEAHRALDIWLEMDTRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDMK 496
Query: 241 CDRKVYNAVIHALA 254
K ++A++ L+
Sbjct: 497 LSYKKFDAIMLRLS 510
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 178/371 (47%), Gaps = 23/371 (6%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRR 112
AGK + H+ Y +I + + D +A + + +G V T L++
Sbjct: 85 AGKVTPTVHT---YAILIGCCCRAGRLDLGFAALGNVVKKGFR-----VDAITFTPLLKG 136
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKD--- 166
CA A++ +R I D + LL LC Q+A L+ D
Sbjct: 137 LCADKRTSDAMD--IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG 194
Query: 167 -VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + S+N +LNG+ G S +A + EM RGI DVV++S II+ KA+ +
Sbjct: 195 GGSPPDVVSYNTVLNGFFKE-GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K + + + M + G+ D YN+++H K+AI +K M GV PNVVTY+SL+
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQ 342
LCK + EAR+ FD M +RG+ P I TY L T E+ LL+ M + G Q
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + + +LI +++ + V++++ ++G P+ Y +I L +G +++A Y
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 403 YMEMKEKQLLP 413
+ +M ++ L P
Sbjct: 434 FEQMIDEGLTP 444
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 151/323 (46%), Gaps = 11/323 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + + ++ LC+ +V DA E ++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI-- 438
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N + +++G C +AE + +EM RGIC + + F+ II + K
Sbjct: 439 DEGLTP-NIIVYTSLIHGLCTC-DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D YN +I + +A L+ SM GV P++VTY +
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
LI C+ ++D+A F EM+ G+SP I TY+ L + R L S+ K G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
Q TY +++ + +++ + + ++ +I AL G+++EA
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ L+P+ +T L+ +
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAE 699
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 165/365 (45%), Gaps = 49/365 (13%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+L + D +A + ++ + + +++ALC+
Sbjct: 193 RGGGSPPDVVSYNTVL---NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P + ++N IL+G+C N++
Sbjct: 250 QAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G S EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI+ D V+N +I A AK V A+ + M + G+ PNVV Y ++I LCK+ +D
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVFGLLESMRKMGCQPTNDTYI 349
+A F++M+ G++P I Y + + + T EE+ +LE + + C T +
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL--ILEMLDRGICLNT-IFFN 485
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I + + K+++ + G PD +Y LI L GK++EA + M
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Query: 410 QLLPE 414
+ P+
Sbjct: 546 GVKPD 550
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V +++ +I C +A L + + G D + ++ L + DA+ + +
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD-I 322
+ M E G P+V +YN+L+K LC + EA + M G P + +Y+ L+
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ + + M G P TY +I + + +V N + +NG PD
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H +G+ +EA +M+ + P T L ++
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 156/394 (39%), Gaps = 51/394 (12%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I C + A + I + L++ CR + DA
Sbjct: 514 PDIITYNTL---IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P N ++NIIL G + ++ A+ +++ +++ G ++ +++ I+
Sbjct: 571 LALFKEMVSSGVSP-NIITYNIILQGLFHTRRTA-AAKELYVSITKSGTQLELSTYNIIL 628
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K + +A L + G+
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G S R ++ + DI R G
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+F + E + + + ++++ VW +IS I
Sbjct: 749 LFMIDE--KHFSLEASTASFLLESSPI-----------VWEQISR-------------IS 782
Query: 389 ALFLNGKLEEAHQYYMEMKEK--QLLPEPKTDEL-------LQDWSYNKQFVERQIASLK 439
L +N KL + + E+ K Q LP+P T+ + L Y + +L
Sbjct: 783 HLSVNLKLIKQPKCTCELGPKWSQNLPKPGTNSVGSVAQFHLSRGGYRAYRGGTTVTALP 842
Query: 440 AHQPQSGQNTRVISKKSD--QDREFLQQPETRRV 471
G N +V +++ Q+R + P V
Sbjct: 843 QGDGNPGPNDKVNPGRTNLAQNRPVIALPRDASV 876
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 230 LFDQMKRMG-----IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTY 281
+FD++ R G +R + + H+ A A+S M G V P V TY
Sbjct: 42 VFDELLRRGRGASIYGLNRALADVARHSPAA------AVSRYNRMARAGAGKVTPTVHTY 95
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMR 337
LI C+A +LD A ++++G T+ L + RT + + +L M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN---GNGPDRSSYTALIHALFLNG 394
++GC P +Y L+K + ++ + ++++ G+ PD SY +++ F G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT 417
++A+ Y EM ++ +LP+ T
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVT 238
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 181/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R D + AF FF+WA Q GY H Y+ +I IL K
Sbjct: 103 LDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQDGYEHEAATYNDVIDILSGTRYK 162
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ T V LL ++R Y H A R +
Sbjct: 163 ARQFGVLCDVLDHMKRRRTRS--VPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPPE 220
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++I+ GWC R A +V
Sbjct: 221 TDALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPKR-AMKVLE 279
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + +++ I + A + + LF+ M+ G K Y+ +I ALA
Sbjct: 280 EMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALA 339
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M + G P+V TY LI+ + KLD A DEM + G P I
Sbjct: 340 KAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIV 399
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL + ++ ++ L E M + C+P+ TY ML+ F R+ +W E+
Sbjct: 400 TYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEM 459
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G +Y +I LF +G+ E+A
Sbjct: 460 DKRGCHRAVDTYETMIDGLFDSGRTEDA 487
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 176/368 (47%), Gaps = 22/368 (5%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S Y +I + + +EM P ++T T+L + YC + D+ RA+
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL---KAYCQIGDLDRAL 79
Query: 124 NAF-----YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
+ F + F + + L+ LC+ + + +A L+ KD P + +N
Sbjct: 80 SHFRGKMWCSPTAFTYCI-------LIHGLCQCQRIDEAYQLLDEMIQKDCHP-DAAVYN 131
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + G A V M +R DV++++ +I + L + +L ++MK
Sbjct: 132 CLIAGLCKM-GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D YNA+++ L K +++ L++ M E G P+ +YN+++ LC++ K +E
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEE 250
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + ++M+++ P + TY++ +D + +E LLE M C PT TY LI
Sbjct: 251 AGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIG 310
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
FSR + + ++V ++ + G PD +Y L+ L GKLEEAH+ M EK P
Sbjct: 311 GFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Query: 414 EPKTDELL 421
+ T +L
Sbjct: 371 DVVTYSIL 378
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 50/385 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +IA L K+ K D A ++ M P ++T +L++ C + + A
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIV---GCCQTNALDEARKLME 186
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK-------- 173
K + LL+ LC+ +++ L+ D F +NT
Sbjct: 187 KMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESG 246
Query: 174 ----------------------SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
++N +++G+C + EAER+ +M R V+++
Sbjct: 247 KYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV-SKMDEAERLLEDMVGRRCAPTVITY 305
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I +S+A L R+ + M + GI D YN ++ L K +++A L++ M E
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
K AP+VVTY+ L+ LCK K+D+AR + ML+RG P + T++ +D + G +E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+LE M+++ C P TY LI + + + + F + G PD++SY++++
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLE 479
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
L GK+EEA Q M++ KQ P
Sbjct: 480 GLCSTGKVEEA-QEVMDLMTKQGCP 503
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 179/356 (50%), Gaps = 24/356 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ KV K D A L+++M G P+++T TL+ R + D R + +
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + + LL LC+ +++A L+ KD P + +++I++NG C +
Sbjct: 330 ---KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP-DVVTYSILVNGLCKL 385
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL---HKVLRLFDQMKRMGIECD 242
G +A + M +RG ++V+F+ +I + KA + HKVL L MK + D
Sbjct: 386 -GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL---MKEVSCTPD 441
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y+ +I K ++DA +++ G++P+ +Y+S+++ LC K++EA++ D
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMD 495
Query: 303 EMLQRGISPTIRTYH----AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
M ++G PT Y D+ R G+E +L+ M + GC+P TY +LI +
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVER-GDEALKMLQVMSERGCEPNLYTYSILINGLCKT 554
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ + V + + E G PD ++YT+LI K++ A+Q + M++ P+
Sbjct: 555 KRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 169/367 (46%), Gaps = 20/367 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G T Y+T++A L + K++ A ++++M + GP +VT +L+ +C V
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM---DGFCKVS 281
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK---- 173
+ A + A + + L+ R + DA +M +D+F
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVM---EDMFKAGISPDLV 338
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L+G C G EA + M ++ DVV++S +++ K + L +
Sbjct: 339 TYNCLLDGLCKA-GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + + +N +I K V + +++ M+E P+VVTY++LI CKA +
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ +A GISP +Y + L+ + TG EE +++ M K GC PT+ Y +
Sbjct: 458 MQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + K+ +SE G P+ +Y+ LI+ L ++E+A M EK
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571
Query: 411 LLPEPKT 417
+P+ T
Sbjct: 572 CVPDVAT 578
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 12/298 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A Y ++ L K+ K D A L++ M P+LVT T+ I +C V
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM---IDGFCKAGKVDE 425
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
K + + L+ C+ +QDA ++ + D S++ +L G
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPD-----KASYSSMLEG 480
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C+ G EA+ V M+++G ++ II + L++ M G E
Sbjct: 481 LCST-GKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y+ +I+ L K + V+DAI+++ M EKG P+V TY SLI CK K+D A Q F
Sbjct: 540 NLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCF 599
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
M G P Y+ + ++G E+ +++ M + GC P TY L++ +
Sbjct: 600 KTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 7/258 (2%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N+ ++ ++ G+ + G+S+ + EM R DV++ + I+ Y + +L + L
Sbjct: 22 PSNS-TYGALITGF-SRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRAL 79
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
F +M Y +IH L + + + +A L+ M +K P+ YN LI L
Sbjct: 80 SHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTN 345
CK K+D AR ML+R P + TY + + +T +E L+E M++ G P
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
Y L+ + Q V K+ E+ E G PD SY ++ L +GK EEA + +
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257
Query: 406 MKEKQLLPEPKTDELLQD 423
M EK+ P+ T L D
Sbjct: 258 MIEKKCGPDVVTYNSLMD 275
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++TMI K K D +++ M+ P +VT TL I YC + R +AF
Sbjct: 410 FNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL---IDGYCKAN---RMQDAFA 463
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
+ + +L LC V++A+ +M K P + + +I+ G C++
Sbjct: 464 I---LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV- 519
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
EA ++ MS+RG ++ ++S +I+ K + + + + D M G D Y
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I K + A K+M + G P+ + YN LI C++ +++A + ML+
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639
Query: 307 RGISPTIRTYHAFLDIIRT 325
+G +P TY + + + T
Sbjct: 640 KGCNPDAATYFSLMRSLTT 658
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 178/371 (47%), Gaps = 23/371 (6%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRR 112
AGK + H+ Y +I + + D +A + + +G V T L++
Sbjct: 85 AGKVTPTVHT---YAILIGCCCRAGRLDLGFAALGNVVKKGFR-----VDAITFTPLLKG 136
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKD--- 166
CA A++ +R I D + LL LC Q+A L+ D
Sbjct: 137 LCADKRTSDAMD--IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG 194
Query: 167 -VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + S+N +LNG+ G S +A + EM RGI DVV++S II+ KA+ +
Sbjct: 195 GGSPPDVVSYNTVLNGFFKE-GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K + + + M + G+ D YN+++H K+AI +K M GV PNVVTY+SL+
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM 313
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQ 342
LCK + EAR+ FD M +RG+ P I TY L T E+ LL+ M + G Q
Sbjct: 314 NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + + +LI +++ + V++++ ++G P+ Y +I L +G +++A Y
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 433
Query: 403 YMEMKEKQLLP 413
+ +M ++ L P
Sbjct: 434 FEQMIDEGLTP 444
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 151/323 (46%), Gaps = 11/323 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + + ++ LC+ +V DA E ++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI-- 438
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N + +++G C +AE + +EM RGIC + + F+ II + K
Sbjct: 439 DEGLTP-NIIVYTSLIHGLCTC-DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D YN +I + +A L+ SM GV P++VTY +
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
LI C+ ++D+A F EM+ G+SP I TY+ L + R L S+ K G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
Q TY +++ + +++ + + ++ +I AL G+++EA
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ L+P+ +T L+ +
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAE 699
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 49/368 (13%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+L + D +A + ++ + + +++ALC+
Sbjct: 193 RGGGSPPDVVSYNTVL---NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P + ++N IL+G+C N++
Sbjct: 250 QAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G S EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI+ D V+N +I A AK V A+ + M + G+ PNVV Y ++I LCK+ +D
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVFGLLESMRKMGCQPTNDTYI 349
+A F++M+ G++P I Y + + + T EE+ +LE + + C T +
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL--ILEMLDRGICLNTI-FFN 485
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I + + K+++ + G PD +Y LI L GK++EA + M
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545
Query: 410 QLLPEPKT 417
+ P+ T
Sbjct: 546 GVKPDIVT 553
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V +++ +I C +A L + + G D + ++ L + DA+ + +
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD-I 322
+ M E G P+V +YN+L+K LC + EA + M G P + +Y+ L+
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ + + M G P TY +I + + +V N + +NG PD
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H +G+ +EA +M+ + P T L ++
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 262 AISLMKSMEEKG---VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A+S M G V P V TY LI C+A +LD A ++++G T+
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 319 FLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L + RT + + +L M ++GC P +Y L+K + ++ + ++++
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 375 ---GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G+ PD SY +++ F G ++A+ Y EM ++ +LP+ T
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVT 238
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I C + A + I + L++ CR + DA
Sbjct: 514 PDIITYNTL---IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P N ++NIIL G + ++ A+ +++ +++ G ++ +++ I+
Sbjct: 571 LALFKEMVSSGVSP-NIITYNIILQGLFHTRRTA-AAKELYVSITKSGTQLELSTYNIIL 628
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K + +A L + G+
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G S R ++ + DI R G
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748
Query: 329 VF 330
+F
Sbjct: 749 LF 750
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 185/383 (48%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ ++ + ++ + T +L +M PS V TL I+I +C ++ V
Sbjct: 73 SVVDFAKILTSIANMKHYSTVLSLSKQMDSLGI-PSDV--YTLAIVINSFCHLNRVDFGF 129
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ LC + +A HL +K V F N ++ +++
Sbjct: 130 SVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLF--DKMVGEGFQPNGVTYGTLIH 187
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G+SR A R+ M Q+ +V++++ II C K R +++ L +F +M GI
Sbjct: 188 GLCKV-GNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGIS 246
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ YN++IH L K K +LM M + + PNVV + +L+ LCK + A
Sbjct: 247 PNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV 306
Query: 301 FDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M+QRG+ P + TY A +D +R+ +E + ++M + GC P +Y LI + +
Sbjct: 307 VDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCK 366
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ + P+ +Y LIH L G+L +A + EM +P+ T
Sbjct: 367 IQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ + +++ +A LKA
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKA 449
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 167/359 (46%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ + A + EM P++ T +++ + ++ V +N
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMV 276
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K V F L+ ALC+ V A ++ + V P + ++ +++G C +
Sbjct: 277 DSKIMPNVV---IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP-DVVTYTALMDGHC-L 331
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA++V+ M ++G +V+S+S +I+ Y K + + K + LF++M + + +
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH L ++DAI+L M G P++VTY L+ LCK R LD+A +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 306 QRGISPTIRTYHAFLD-IIRTGE-EVFG-LLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++P I++Y+ +D + R GE E G L S+ G P TY ++I
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K++ E++ +G PD +Y + N + A Q EM + + T L+
Sbjct: 512 EATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLI 570
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 170/399 (42%), Gaps = 39/399 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
G+ T + T+I L K A L D+M G P+ VT TL+
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA 198
Query: 108 -----ILIRRYCAVH---------------DVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
++++ C + V A+N F + + + ++
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC++ + LM + + P N F +++ C G A V M QRG+
Sbjct: 259 LCKFSEWKHVATLMNEMVDSKIMP-NVVIFTTLVDALCK-EGMVTIAHDVVDVMIQRGVE 316
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
DVV+++ ++ + + + ++FD M R G + Y+ +I+ K + + A+ L
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
+ M ++ + PN+VTYN+LI LC +L +A F EM+ G P + TY LD +
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R ++ +L+++ P +Y ++I R + +++ +S G PD +
Sbjct: 437 TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWT 496
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
YT +I+ L L G L EA + + EM P+ T L+
Sbjct: 497 YTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 9/250 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y T+I K+++ D A L +EM E P++VT TL I C V +
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL---IHGLCHVGRL 405
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNI 177
AI F+ + ++ LL LC+ +++ A ++ ++ P + +S+NI
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP-DIQSYNI 464
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C + G A ++ +S +G+ DV +++ +I+ L + +LF +M
Sbjct: 465 VIDGMCRV-GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTD 523
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D YN + + AI L++ M +G + + T +LI + LD++
Sbjct: 524 GCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTI-TLIVEMLSDDGLDQS 582
Query: 298 -RQAFDEMLQ 306
+Q E +Q
Sbjct: 583 VKQILHEFVQ 592
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 120/295 (40%), Gaps = 46/295 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ T++ L K A ++D M RG E P +VT L+ +C ++ A
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVE--PDVVTYTALM---DGHCLRSEMDEADKV 341
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F R A + + L++ C+ + + A +L C +++ P N ++N +++G C
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVP-NIVTYNTLIHGLC 400
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR-------------- 229
++ G R+A ++ EM G D+V++ ++ K R+L + +
Sbjct: 401 HV-GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Query: 230 ---------------------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
LF + G+ D Y +I+ L L+ +A L +
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
M G +P+ TYN + + + + A Q EML RG S T ++++
Sbjct: 520 MNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIM 350
+DEA +F+ ML P++ + L I + V L + M +G T +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I F + F V +I + G+ PD +++T LI L + GK+ EA + +M +
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 411 LLPEPKT 417
P T
Sbjct: 175 FQPNGVT 181
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 200/429 (46%), Gaps = 33/429 (7%)
Query: 29 VSSELVSEVL---SWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
VSS +V V+ VR+ + FF WA + HS Y MI + GKVR+FD
Sbjct: 105 VSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDL 164
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF-----YAYKRFKFAVGI 138
AW LID M+ T + +T IL+RRY A++AF Y K K A
Sbjct: 165 AWQLIDLMK---TRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIA--- 218
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F ++S+L + + +A+ KD F + + +++GWC G+ EAERV+ E
Sbjct: 219 --FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRA-GNISEAERVFGE 275
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M GI +V ++S +I ++ + + +F +M +G + + +N ++ K
Sbjct: 276 MKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 335
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ + + M+ G P+ +TYN LI+ C+ L+EA + + +++G + +++
Sbjct: 336 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNP 394
Query: 319 FLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
I +V + M+ + C+P TY +L++ F+ + V K+ E+ EN
Sbjct: 395 IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENE 454
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEM-KEKQLLPE-PKTDELLQDWSYNKQFVER 433
P+ ++Y LI G A+ ++ EM +EK L P P + +LQ R
Sbjct: 455 IEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQL--------R 506
Query: 434 QIASLKAHQ 442
+ LK H+
Sbjct: 507 KAGQLKKHE 515
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + Y +I L + + A + EM P+ +T L+ R +
Sbjct: 277 KMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLM---RVHVKA 333
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ + + KR + L+ + CR N+++A ++ K N SFN
Sbjct: 334 GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFN 393
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I G + +G A R++ +M + V+++ ++ ++ ++ VL+L +M
Sbjct: 394 PIF-GCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDE 452
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLD 295
IE + Y +I +A S K M EEK + P++ Y +++ L KA +L
Sbjct: 453 NEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLK 512
Query: 296 EARQAFDEMLQRG 308
+ + ++M+ RG
Sbjct: 513 KHEELVEKMVNRG 525
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 184/383 (48%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST +++ ++ + K++ T +L +M P++ TL ILI +C ++ VG A
Sbjct: 60 STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI---YTLHILINSFCHLNRVGFAF 116
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ + + +A HL +K + F + ++ ++N
Sbjct: 117 SVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF--DKMIGEGFRPDVVTYGTLIN 174
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q+ +V +++ II K R + + LF +M GI
Sbjct: 175 GLCKV-GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN++IHAL K +L+ M + + P+VV++N+++ LCK K+ EA
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D+M+QRG+ P + TY A +D ++ +E + ++M GC P +Y LI + +
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ PD +Y+ LIH L +L++A + EM +P T
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ +++ +A LKA
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKA 436
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 10/358 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ A+ L EM P + T +L+ + C V +N
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A ++ + V P N ++ +++G C +
Sbjct: 264 DSKIMPDVVS---FNTVVDALCKEGKVTEAHDVVDKMIQRGVEP-NVVTYTALMDGHC-L 318
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ EA +V+ M +G +V+S++ +I+ Y K + + K + LF +M R + D
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ +IH L ++DAI+L M PN+VTY L+ LCK R L EA +
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ P I+ + +D + R G E L ++ G QP TY ++I R
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
K++ E+ ENG + Y + N + A Q EM + + T L
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 556
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 156/356 (43%), Gaps = 12/356 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV A L+ M P++ T+ I C V
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI---IDSLCKDRQV 217
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFN 176
A N F + I + L+ ALC +K+V + M +K + P + SFN
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK-IMP-DVVSFN 275
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G EA V +M QRG+ +VV+++ ++ + + + +++FD M
Sbjct: 276 TVVDALCKE-GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + YN +I+ K + + A+ L M + + P+ VTY++LI LC +L +
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A F EM+ P + TY LD + R E LL+++ P + I
Sbjct: 395 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
R + +++ +S G PD +Y+ +I+ L G L+EA + + EM E
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 510
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 12/361 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T + T+I + K A L D+M G P +VT TL I C V +
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTL---INGLCKVGNT 182
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI + + + + ++ +LC+ + V +A +L K + P + ++N
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP-DIFTYNS 241
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ CN+ + + EM I DVVSF+ ++ K + + + D+M +
Sbjct: 242 LIHALCNLC-EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + Y A++ + +A+ + +M KG PNV++YN+LI CK +++D+A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
F EM ++ + P TY H + R ++ L M P TY +L+
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERL-QDAIALFHEMVACSQIPNLVTYRILLD 419
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R + I + PD I + G+LE A + + K L P
Sbjct: 420 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 479
Query: 414 E 414
+
Sbjct: 480 D 480
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F++M RM +N ++ ++AK + +SL M+ G+ PN+ T + LI C
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 291 AR-----------------------------------KLDEARQAFDEMLQRGISPTIRT 315
K+ EA FD+M+ G P + T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 316 YHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y ++ + + G LL SM + CQP Y +I + RQ F +++E+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G PD +Y +LIHAL + + EM + +++P+
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 137/312 (43%), Gaps = 50/312 (16%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
++T++ L K K A ++D+M RG E P++VT L+ +C + ++ A+
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVE--PNVVTYTALM---DGHCLLSEMDEAVK 327
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
F + + L++ C+ + + A +L C +++ P +T +++ +++G
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP-DTVTYSTLIHGL 386
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C++ ++A ++ EM ++V++ ++ K R L + + L ++ ++ D
Sbjct: 387 CHV-ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF- 301
+V N I + + ++ A L ++ KG+ P+V TY+ +I LC+ LDEA + F
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505
Query: 302 ----------------------------------DEMLQRGISPTIRTYHAFLDIIRTGE 327
EM+ RG S T F+ ++
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD- 564
Query: 328 EVFGLLESMRKM 339
GL +S++++
Sbjct: 565 ---GLDQSLKQI 573
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T+I K+++ D A L EM E P VT TL I C V + AI F
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL---IHGLCHVERLQDAIALF 399
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCN 184
+ + ++ LL LC+ + + +A L+ ++ P + + NI ++G C
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP-DIQVNNIAIDGMCR 458
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G A ++ +S +G+ DV ++S +I+ + L + +LF +M G +
Sbjct: 459 A-GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 517
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+YN + + AI L++ M +G + + T +K L +Q E
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREF 577
Query: 305 LQ 306
+Q
Sbjct: 578 VQ 579
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH- 317
+ AIS M P+ V +N L+ + K + +M GI P I T H
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 318 ---AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+F + R G F +L + K+G QP T+ LI+ + G +++++
Sbjct: 102 LINSFCHLNRVG-FAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +Y LI+ L G A + M +K P
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 199
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 183/368 (49%), Gaps = 12/368 (3%)
Query: 60 GYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G A + Y+ ++ A+ G+ + + A +++ +MRG P+ VT TL + +C +
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKE-ALSVLRDMRGAGCDPNAVTYNTL---VAAFCRAGE 207
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V RA + + F +++ +C+ ++DA + + + P + S+N
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP-DGVSYN 266
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+C + G S EA V+ EM+++GI DVV+F+ +I KA NL + + L +M+
Sbjct: 267 TLVGGYCKV-GCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE 325
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ + + A+I K + DA+ ++ M + + P+VV YN+LI C ++DE
Sbjct: 326 RGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDE 385
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIK 353
AR+ EM +G+ P + TY L + G+ F L + M + G P TY LI+
Sbjct: 386 ARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIR 445
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ G+ ++ + G PD +YT+LI G +E A + EM + +LP
Sbjct: 446 VLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505
Query: 414 EPKTDELL 421
+ T +L
Sbjct: 506 DVVTYSVL 513
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 178/382 (46%), Gaps = 11/382 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GYA S Y+ ++ L +A D M P++ T IL+R C
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYN---ILVRALCGRGHR 173
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A++ + + L++A CR V AE L M + P N +FN
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKP-NLVTFNS 232
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C G +A +V+ EM + G+ D VS++ ++ Y K H+ L +F +M R
Sbjct: 233 VVNGICKA-GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK 291
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D + ++IH + K ++ A+ L++ M E+G+ N +T+ +LI CK LD+A
Sbjct: 292 GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
A EM Q I P++ Y+A ++ ++ +E L+ M G +P TY ++
Sbjct: 352 LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + F++ ++ ENG PD +Y++LI L +L +AH + M L P+
Sbjct: 412 YCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPD 471
Query: 415 PKTDELLQDWSYNKQFVERQIA 436
T L D + VER ++
Sbjct: 472 EVTYTSLIDGHCKEGNVERALS 493
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 176/445 (39%), Gaps = 91/445 (20%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--------- 107
+ +G + Y+T++A + + D A L+D MR G P+LVT +++
Sbjct: 184 RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRM 243
Query: 108 -----------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
L+ YC V A++ F R + F L
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
Query: 145 LSALCRYKNVQDAEHLM---------------------FCNKDVF--------------- 168
+ +C+ N++ A L+ FC K
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Query: 169 -PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + +N ++NG+C ++G EA + EM +G+ DVV++S I+S Y K + H
Sbjct: 364 QP-SVVCYNALINGYC-MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+L QM G+ D Y+++I L + + + DA L K+M G+ P+ VTY SLI
Sbjct: 422 FQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
CK ++ A DEM++ G+ P + TY ++ + RT +E LL + P
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART-KEAQRLLFKLYHEEPVP 540
Query: 344 TNDTY---------------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
N Y + L+K F KV+ I + D S Y+ LIH
Sbjct: 541 ANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIH 600
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
G + +A ++ +M + P
Sbjct: 601 GHCREGNVMKALSFHKQMLQCGFAP 625
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 14/282 (4%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G V++++ ++ S A +L R FD M G+ + YN ++ AL K+A
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
+S+++ M G PN VTYN+L+ C+A ++D A + D M + G+ P + T+++ ++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
I + G E+ + + M K G P +Y L+ + + V+ E++ G PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
++T+LIH + G LE A EM+E+ L T L D K F++ + +++
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 440 AH-----QP-----QSGQNTRVISKKSDQDREFLQQPETRRV 471
QP + N + + D+ RE +++ E + V
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGV 398
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 125/332 (37%), Gaps = 60/332 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I V + D A L+ EM P +VT T+L YC D A
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTIL---SAYCKNGDTHSAFQLNQ 426
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--SFNIILNGWCNI 185
+ L+ LC K + DA H++F N ++ +++G C
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCEEKRLGDA-HVLFKNMISLGLQPDEVTYTSLIDGHCKE 485
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA------------------------ 221
G+ A + EM + G+ DVV++S +I+ SK+
Sbjct: 486 -GNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIK 544
Query: 222 --------RN--LHKVLRLFDQ--MKRMGIECDR--------------KVYNAVIHALAK 255
RN L VL L MK + E D+ VY+ +IH +
Sbjct: 545 YDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCR 604
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
V A+S K M + G APN + SLI+ L + + EA Q ++L
Sbjct: 605 EGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEA 664
Query: 316 YHAFLDI-IRTG--EEVFGLLESMRKMGCQPT 344
A +D+ ++ G + V +L M + G P+
Sbjct: 665 SKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 9/375 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + + G A + Y+ ++ L + + A ++ +MRG P+ VT TL+
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
R + R ++ K + F +++ LC+ ++ A + + + P
Sbjct: 199 RAGELDGAERVVSLMREEGNAK--PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ S+N +L+G+C + G E+ V+ EM+QRG+ DVV+F+ +I KA NL + +
Sbjct: 257 -DVVSYNTLLSGYCKV-GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L QM+ G+ + + A+I K + DA+ ++ M + G+ P+VV YN+LI C
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K ++D AR+ EM + + P + TY + + G + F L + M K G P
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY LI+ ++ + +++ + + G PD +YT LI G +E+A + EM
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 407 KEKQLLPEPKTDELL 421
K +LP+ T +L
Sbjct: 495 IRKGVLPDVVTYSVL 509
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 12/383 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GYA S Y+ ++ L +A + M P++ T IL+R CA +
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYN---ILVRALCARGRL 168
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH---LMFCNKDVFPFNTKSFN 176
A+ + A + L++A CR + AE LM + P N +FN
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP-NLVTFN 227
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++NG C G A +V+ EM + G+ DVVS++ ++S Y K LH+ L +F +M +
Sbjct: 228 SMVNGLCKA-GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D + ++IHA K ++ A++L+ M E+G+ N VT+ +LI CK LD+
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIK 353
A A +EM + GI P++ Y+A ++ + G L+ M +P TY +I
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + F++ ++ + G PD +Y++LI L +L +A + + M + + P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 414 EPKTDELLQDWSYNKQFVERQIA 436
+ T L D + VE+ ++
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALS 489
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 164/401 (40%), Gaps = 60/401 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++M+ L K + + A + DEM P +V+ TLL YC V + ++ F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL---SGYCKVGCLHESLAVFS 282
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---------------------FCNKD 166
+ + F L+ A C+ N++ A L+ FC K
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
Query: 167 VF----------------PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
P + +N ++NG+C + G A + EM + + DVV+
Sbjct: 343 FLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKL-GRMDLARELIREMEAKRVKPDVVT 400
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S IIS Y K NL +L +M + G+ D Y+++I L + + + DA L ++M
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+ GV P+ TY +LI CK +++A DEM+++G+ P + TY ++ + +
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Query: 328 EVFGLLESMRKMGCQPTNDTY---------------IMLIKKFSRWRQFGNVFKVWNEIS 372
E LL + P N Y + L+K F KV+ +
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ D S Y+ LIH G + +A ++ +M P
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 17/284 (5%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKD 261
G V +++ ++ S A +L R M R G+ + YN ++ AL A+GRL ++
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRL-EE 170
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFL 320
A+ ++ M G APN VTYN+L+ C+A +LD A + M + G P + T+++ +
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + + G E + + M + G P +Y L+ + + V++E+++ G
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
PD ++T+LIHA G LE+A +M+E+ L T L D K F++ + +
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 438 LK-----AHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRV 471
++ QP +I+ + D RE +++ E +RV
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 145/370 (39%), Gaps = 68/370 (18%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G S Y+ +I K+ + D A LI EM P +VT T+ I YC V
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI---ISGYCKV 411
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
++ A + + L+ LC K + DA L + D F +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA---RNLHKV 227
T +++G C G+ +A + EM ++G+ DVV++S +I+ SK+ + H++
Sbjct: 472 TT-----LIDGHCKE-GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 228 L-RLFDQ--------------------------------MKRMGIECDR----------- 243
L +L+ + MK + E D+
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 244 ---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
VY+ +IH +G V+ A+S K M G +PN + SL++ L + + EA A
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRT-GEEVFGLLESMRKMGCQPTND--TYIMLIKKFSR 357
++L A +D+ R G + F + P+ + Y+M I F
Sbjct: 646 IQDLLTCCPLADAEASKALIDLNRKEGMDYFQAQGEIWYSESSPSVEYWNYMMTICHFGV 705
Query: 358 WRQFGNVFKV 367
W + ++ ++
Sbjct: 706 WSTYFSMLRL 715
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 187/400 (46%), Gaps = 18/400 (4%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
FF WA + HS Y MI + GKVR+FD AW LID M+ T + +T
Sbjct: 1161 TLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMK---TRNVEIPVETFT 1217
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
IL+RRY A++AF + + F ++S+L + + +A+ KD
Sbjct: 1218 ILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR 1277
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + +++GWC G+ EAERV+ EM GI +V ++S +I ++ + +
Sbjct: 1278 FEPDVVVYTSLVHGWCRA-GNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRA 1336
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F +M +G + + +N ++ K + + + M+ G P+ +TYN LI+
Sbjct: 1337 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 1396
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPT 344
C+ L+EA + + +++G + +++ I +V + M+ + C+P
Sbjct: 1397 HCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 1455
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +L++ F+ + V K+ E+ EN P+ ++Y LI G A+ ++
Sbjct: 1456 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 1515
Query: 405 EM-KEKQLLPE-PKTDELLQDWSYNKQFVERQIASLKAHQ 442
EM +EK L P P + +LQ R+ LK H+
Sbjct: 1516 EMIEEKCLRPSLPVYEMVLQQL--------RKAGQLKKHE 1547
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + Y +I L + + A + EM P+ +T L+ R +
Sbjct: 1309 KMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLM---RVHVKA 1365
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ + + KR + L+ + CR N+++A ++ K N SFN
Sbjct: 1366 GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFN 1425
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I G + +G A R++ +M + V+++ ++ ++ ++ VL+L +M
Sbjct: 1426 PIF-GCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDE 1484
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLD 295
IE + Y +I +A S K M EEK + P++ Y +++ L KA +L
Sbjct: 1485 NEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLK 1544
Query: 296 EARQAFDEMLQRG 308
+ + ++M+ RG
Sbjct: 1545 KHEELVEKMVNRG 1557
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 9/375 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + + G A + Y+ ++ L + + A ++ +MRG P+ VT TL+
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
R + R ++ K + F +++ LC+ ++ A + + + P
Sbjct: 199 RAGELDGAERVVSLMREEGNAK--PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ S+N +L+G+C + G E+ V+ EM+QRG+ DVV+F+ +I KA NL + +
Sbjct: 257 -DVVSYNTLLSGYCKV-GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L QM+ G+ + + A+I K + DA+ ++ M + G+ P+VV YN+LI C
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K ++D AR+ EM + + P + TY + + G + F L + M K G P
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY LI+ ++ + +++ + + G PD +YT LI G +E+A + EM
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 407 KEKQLLPEPKTDELL 421
K +LP+ T +L
Sbjct: 495 IRKGVLPDVVTYSVL 509
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 12/383 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GYA S Y+ ++ L +A + M P++ T IL+R CA +
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYN---ILVRALCARGRL 168
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH---LMFCNKDVFPFNTKSFN 176
A+ + A + L++A CR + AE LM + P N +FN
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKP-NLVTFN 227
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++NG C G A +V+ EM + G+ DVVS++ ++S Y K LH+ L +F +M +
Sbjct: 228 SMVNGLCKA-GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D + ++IHA K ++ A++L+ M E+G+ N VT+ +LI CK LD+
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIK 353
A A +EM + GI P++ Y+A ++ + G L+ M +P TY +I
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + F++ ++ + G PD +Y++LI L +L +A + + M + + P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466
Query: 414 EPKTDELLQDWSYNKQFVERQIA 436
+ T L D + VE+ ++
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALS 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 165/401 (41%), Gaps = 60/401 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++M+ L K + + A + DEM P +V+ TLL YC V + ++ F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL---SGYCKVGCLHESLAVFS 282
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---------------------FCNKD 166
+ + F L+ A C+ N++ A L+ FC K
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342
Query: 167 VFP---------------FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+ +N ++NG+C + G A + EM + + DVV++
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL-GRMDLARELIREMEAKRVKPDVVTY 401
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S IIS Y K NL +L +M + G+ D Y+++I L + + + DA L ++M +
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGE 327
GV P+ TY +LI CK +++A DEM+++G+ P + TY ++ + RT +
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART-K 520
Query: 328 EVFGLLESMRKMGCQPTNDTY---------------IMLIKKFSRWRQFGNVFKVWNEIS 372
E LL + P N Y + L+K F KV+ +
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ D S Y+ LIH G + +A ++ +M P
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 17/284 (5%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKD 261
G V +++ ++ S A +L R M R G+ + YN ++ AL A+GRL ++
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRL-EE 170
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFL 320
A+ ++ M G APN VTYN+L+ C+A +LD A + M + G P + T+++ +
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + + G E + + M + G P +Y L+ + + V++E+++ G
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
PD ++T+LIHA G LE+A +M+E+ L T L D K F++ + +
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 438 LK-----AHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRV 471
++ QP +I+ + D RE +++ E +RV
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 65/340 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G S Y+ +I K+ + D A LI EM P +VT T+ I YC V
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI---ISGYCKV 411
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
++ A + + L+ LC K + DA L + D F +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA---RNLHKV 227
T +++G C G+ +A + EM ++G+ DVV++S +I+ SK+ + H++
Sbjct: 472 TT-----LIDGHCKE-GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 228 L-RLFDQ--------------------------------MKRMGIECDR----------- 243
L +L+ + MK + E D+
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 244 ---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
VY+ +IH +G V+ A+S K M G +PN + SL++ L + + EA A
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
++L A +D+ R V L++ + M
Sbjct: 646 IQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMA 685
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 186/403 (46%), Gaps = 16/403 (3%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVR---NDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
S M + + I +S+ L+ VLS R D A + A + G A S T I
Sbjct: 55 SAMESALSTSSILLSAPLLDLVLSRFRFAHGDPLRALSLLSLAVDRCGVAPSPFTLDTAI 114
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+LG+ R+F W L+ P VT +T ++++ R + V + +F R
Sbjct: 115 YVLGRARRFTHMWDLVHSYH--RLCPDAVTARTAMVVLGRVAKICSVRETVASFRRLLRL 172
Query: 133 KFAV-GIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
G E F LL LC+ K++ DA ++ +K F N ++FNI+L+GW +
Sbjct: 173 FRGREGTESADLFNALLRTLCQEKSMSDARNVFHAHKYEFQVNRQTFNILLSGW----KT 228
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
S +AE + EM + GI D+V+++ +I C K R++ K +L D+M+ I D Y +
Sbjct: 229 SEDAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTS 288
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L A L+K M E G P+V YN+ I+ A++L +A DEM +G
Sbjct: 289 LIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKG 348
Query: 309 ISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY+ F ++ L E MR C P + + +++ R +
Sbjct: 349 LMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKVMQAL 408
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++W+++ NG G L L GKLEEA + + +M E
Sbjct: 409 ELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVE 451
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
++NA++ L + + + DA ++ + + + N T+N L L + ++A F EM
Sbjct: 184 LFNALLRTLCQEKSMSDARNVFHAHKYE-FQVNRQTFNIL---LSGWKTSEDAEAFFAEM 239
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ GI P + TY++ +D R E+ + LL+ MR+ P TY LI Q
Sbjct: 240 RELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQP 299
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL- 420
+ E+ E G PD +Y A I + +L +A EM K L+P T L
Sbjct: 300 DKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNLF 359
Query: 421 --LQDWSYN 427
W+Y+
Sbjct: 360 FRFYYWAYD 368
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL + + + AF FF WA +Q GY+H Y+ +I IL K
Sbjct: 99 LDALGAELTTPLVADVLHRLLYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYK 158
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ G V + LL ++R Y H A R +
Sbjct: 159 SRQFGVLCNVLDHMK--RHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE 216
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++ + GWC ++A +V
Sbjct: 217 TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRA-RDPKKAMKVLE 275
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + ++ I + A + + LF+ M+ G+ K Y+ +I ALA
Sbjct: 276 EMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALA 335
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M G P+V TY LI+ +C +LD A + DEM + G P I
Sbjct: 336 KADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIV 395
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL++ +R ++ L E M + C+P+ TY ML+ F + +W E+
Sbjct: 396 TYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEM 455
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G +Y +I+ LF G+ E A
Sbjct: 456 DKRGCQRAIDTYEIMIYGLFDCGETEYA 483
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C DV ++ ++ G C ++G A RV EM + G D+V+++C ++ R
Sbjct: 355 CMPDV-----TTYKDLIEGMC-LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLR 408
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N L L ++M E YN ++ + A+ + M+++G + TY
Sbjct: 409 NADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYE 468
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRK 338
+I L + + A DE++ R + + + + A L + + L E MRK
Sbjct: 469 IMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHMRK 527
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 179/367 (48%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ G P +V T+ I C V
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTI---IDGMCKDKHV 349
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + + L+S C ++DA L +K++ P + +F+I
Sbjct: 350 NDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP-DVYTFSI 408
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G+C G+ +EA+ V M ++ I DVV++S ++ Y ++K +F+ M
Sbjct: 409 LVDGFCKD-GNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR 467
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + + YN +I+ K ++V +A+ L K M K + P+V+TY+SLI LCK+ ++ A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKK 354
+ DEM RG P I TY++ LD + V LL ++ G +P +TY +L+K
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + KV+ ++ G D +YT +I G +EA +M+E +P+
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647
Query: 415 PKTDELL 421
KT E++
Sbjct: 648 AKTYEII 654
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T + + G+C + G +A ++ G D VS+ +I+ K L L
Sbjct: 262 DTITLTTFIKGFC-LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ ++ D +YN +I + K + V DA L K + P+V TYN+LI C
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
KL +A F++M + I P + T+ +D + G +E +L M K +P T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ + + ++N +S G + SY +I+ ++EA + + EM
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 408 EKQLLPEPKTDELLQD 423
KQ+ P+ T L D
Sbjct: 501 HKQIFPDVITYSSLID 516
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT +L+ YC V++V +A + F ++ + +++ C+ K V +A
Sbjct: 436 PDVVTYSSLM---DGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L +K +FP + +++ +++G C G A + EM RG D+++++ I+
Sbjct: 493 MKLFKEMHHKQIFP-DVITYSSLIDGLCKS-GRISYALELVDEMHYRGQQPDIITYNSIL 550
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECD--------------------RKV---------- 245
K ++ K + L ++K GI D RKV
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Query: 246 -----YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
Y +I L +A++L+ MEE G P+ TY +I L + + D A +
Sbjct: 611 LDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKL 670
Query: 301 FDEMLQRGI 309
EM+ RG+
Sbjct: 671 LREMIMRGL 679
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 183/369 (49%), Gaps = 13/369 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL G+A + ++ ++ +L + FD AW + + ++ ++ + I+I
Sbjct: 111 FLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS----KVVLNAYSFGIMIT 166
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD---VF 168
C R + F + + + L+ C+ +V A++L FC D +
Sbjct: 167 GCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNL-FCKMDRLGLV 225
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N ++++++NG+ G RE +++ M++ GI + +++C+IS Y + K
Sbjct: 226 P-NQHTYSVLMNGFFKQ-GLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAF 283
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++F +M+ GI C YN +I L +G+ +A+ L+ + + G++PN+VTYN LI
Sbjct: 284 KVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGF 343
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTN 345
C K+D A + F+++ G+SPT+ TY+ + E + G L+ +++M +
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSK 403
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +LI F+R ++ + + ++G PD +Y+ LIH +NG ++EA + +
Sbjct: 404 VTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463
Query: 406 MKEKQLLPE 414
+ E L P
Sbjct: 464 LGEMHLQPN 472
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 131/307 (42%), Gaps = 34/307 (11%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDV 167
LI YC V +A F + A G+ + L+ LCR K +A L+ NK
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++NI++NG+C++ G A R++ ++ G+ +V+++ +I+ YSK NL
Sbjct: 329 LSPNIVTYNILINGFCDV-GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L +M+ I + Y +I A A+ A + ME+ G+ P+V TY+ LI
Sbjct: 388 LDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDT 347
C + EA + F +S+ +M QP +
Sbjct: 448 XCVNGNMKEASKPF--------------------------------KSLGEMHLQPNSVI 475
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +I + + ++ NE+ +G P+ +S+ + + L + K +EA +M
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMI 535
Query: 408 EKQLLPE 414
L P
Sbjct: 536 NSGLKPS 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 137/302 (45%), Gaps = 6/302 (1%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA-GKQSGYAHSTREYHTMIAIL 75
+M + GI ++ + ++S ND F ++A ++ G A Y+ +I L
Sbjct: 249 QMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ +KF A L+ ++ P++VT ILI +C V + A+ F K +
Sbjct: 309 CRGKKFGEAVKLVHKVNKVGLSPNIVTYN---ILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SFNIILNGWCNIIGSSREAER 194
+ + L++ + +N+ A L+ ++ +K ++ I+++ + + + + E
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ M + G+ DV ++S +I N+ + + F + M ++ + +YN +IH
Sbjct: 426 HSL-MEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYC 484
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K A+ L+ M G+ PNV ++ S + LC+ K EA +M+ G+ P++
Sbjct: 485 KEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Query: 315 TY 316
Y
Sbjct: 545 LY 546
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
L+ +EE G++PNVV Y +LI CK + A+ F +M + G+ P TY ++
Sbjct: 180 LLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFF 239
Query: 324 RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G E F + E+M + G P Y LI ++ FKV+ E+ E G
Sbjct: 240 KQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVM 299
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+Y LI L K EA + ++ + L P T +L
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 86/204 (42%), Gaps = 37/204 (18%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y+A+++A A++ + M +G AP T+N+L+ L ++ D+A F+ +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 305 LQR----------------------------------GISPTIRTYHAFLD-IIRTGEEV 329
+ G+SP + Y +D + G+ +
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210
Query: 330 FG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L M ++G P TY +L+ F + F+++ ++ +G P+ +Y LI
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270
Query: 388 HALFLNGKLEEAHQYYMEMKEKQL 411
+G +++A + + EM+EK +
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGI 294
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 19/394 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
ND + A + F +Q+ + E++ ++ L K + + T L +M P+LV
Sbjct: 40 NNDVDDAVSLFNRLLQQNPTPPNI-EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
ILI +C + + A + + + L+ LC + D ++
Sbjct: 99 NCN---ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV 155
Query: 162 FCNKDVFPFNTK-----------SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
KD K +F I+++G+C G +EA+ V M +GI VV+
Sbjct: 156 GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKE-GRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ ++ Y + ++K +F+ M ++G+ D + Y+ +I+ K +++ +A+ L+K M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV- 329
K + PNVVTY+SLI LCK+ K+ A + DEM RG P I TY + LD + +V
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334
Query: 330 --FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
LL M+ G QP TY +LIK + + + KV+ ++ G+ + +YT +I
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G +EA +M++ +P KT E++
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII 428
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 13/246 (5%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ + Q+ + F+ I+ K+++ H VL L +M+ GI+ + N +I
Sbjct: 45 DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK----------ARKLDEARQA 300
++ + + A S++ + + G PN +T N+LIK LC KL +A
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F++M+ I+P + T+ +D + G +E +L M G +P TY L+ +
Sbjct: 165 FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFL 224
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Q ++N +++ G PD SY+ LI+ ++EA + EM KQ++P T
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284
Query: 418 DELLQD 423
L D
Sbjct: 285 YSSLID 290
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT +L+ Y V V +A + F + + I+ + L++ C+ K + +A
Sbjct: 210 PGVVTYNSLM---DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ +K + P N +++ +++G C G A ++ EM RG ++V++S I+
Sbjct: 267 MELLKEMHHKQIIP-NVVTYSSLIDGLCKS-GKISYALKLVDEMHDRGQPPNIVTYSSIL 324
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + + L QMK GI+ + Y +I L + ++DA + + + KG
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
NV TY +I+ C DEA +M G P +TY +
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 31/419 (7%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+ +++ GI+ L+ V + + + FLWA + + + + ++ L K
Sbjct: 111 LHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRPAFRPGPKLFDAVVNALAK 170
Query: 78 VRKFDTAWALI-----DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
R+FD AW L+ + LV+ T I+IRRY RA + A + +
Sbjct: 171 AREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMIRRY------ARAGMSKLAIRTY 224
Query: 133 KFAV---GIED-------FQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNII 178
+FA I D + L+ +LC+ +V++A K++ P + + +NI+
Sbjct: 225 EFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEYFLWKKELDLSWVP-SIRVYNIM 283
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
LNGW + ++ ER+W EM + + VV++ ++ Y + R + K L + M + G
Sbjct: 284 LNGWFRL-RKLKQGERLWAEMKE-NMRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEG 341
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I + VYN +I ALA+ K+A+ +++ + P TYNSL+K CKA L A
Sbjct: 342 IAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGAS 401
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ M+ RG P+ TY+ F R EE L + + G P TY +L+K
Sbjct: 402 KILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKML 461
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ +V E+ NG D ++ T L+H L +LEEA + +M + ++P+
Sbjct: 462 CEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQ 520
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 15/276 (5%)
Query: 48 AFTFFLWAGKQS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A +FLW + + S R Y+ M+ ++RK L EM+ P++VT TL
Sbjct: 259 ASEYFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMKEN-MRPTVVTYGTL 317
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCN 164
+ YC + V +A+ + A + ++ AL ++A ++ F
Sbjct: 318 ---VEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHV 374
Query: 165 KDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
++ P ++ ++N ++ G+C +++G+S+ + M RG +++ +S+
Sbjct: 375 LEIGPTDS-TYNSLVKGFCKAGDLVGASK----ILKMMISRGFLPSATTYNYFFRYFSRC 429
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + + L+ ++ + G DR Y+ ++ L + + A+ + K M G ++ T
Sbjct: 430 RKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATS 489
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
L+ LCK R+L+EA F++M++RGI P T+
Sbjct: 490 TMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQ 525
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 108/262 (41%), Gaps = 25/262 (9%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
LWA + + Y T++ ++R+ + A ++ +M P+ + ++
Sbjct: 299 LWAEMKENMRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPII----- 353
Query: 113 YCAVHDVGRAINAFYAYKRFK-FAVGIED--FQGLLSALCRYKNVQDAEHL--MFCNKDV 167
A+ + GR A +RF +G D + L+ C+ ++ A + M ++
Sbjct: 354 -DALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASKILKMMISRGF 412
Query: 168 FPFNTKSFNIILNGW--CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P T ++N + C I E ++ ++ Q G D +++ ++ + L
Sbjct: 413 LPSAT-TYNYFFRYFSRCRKI---EEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEEKLD 468
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+++ +M+ G + D ++H L K R +++A + M +G+ P +T+ +
Sbjct: 469 LAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQRM- 527
Query: 286 KPLCKARKLDEARQAFDEMLQR 307
K D +Q EM Q+
Sbjct: 528 -------KADLKKQGMTEMAQK 542
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 181/400 (45%), Gaps = 74/400 (18%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++ECG+++S +LV ++L ++ AF FF WAGK+ G+ H +R Y+ M+ +LG+
Sbjct: 83 MEAVLDECGVRLSHDLVVDMLQRFKH-AXPAFRFFCWAGKRPGFDHDSRTYNCMMCVLGR 141
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F+T A+++EM GE G L+T +T + I+ + + +A F K+++F VG
Sbjct: 142 TRQFETMVAMLEEM--GEMG--LLTMETFSVAIKTFAEANQRKKAAGIFDLMKKYEFKVG 197
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ LL +L K ++A+ + +RVW
Sbjct: 198 VDVINFLLDSLSAAKLGKEAQAVF------------------------------EKRVWN 227
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM RG D+V+ +N ++ L K +
Sbjct: 228 EMIDRGFKPDIVA-----------------------------------HNVMLEGLLKCK 252
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
DA L + M+ K +PNV +Y +I+ CK + + E + DEM+ R P Y
Sbjct: 253 -KSDAXKLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDRECQPDAALYT 311
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + V+ LL+ MRK GC P TY LIK + + + +++ ++S++
Sbjct: 312 CLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDAVRIYKKMSQS 371
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P +Y ++ + F+ E H + M +K P+
Sbjct: 372 GIKPTIHTYNMIMRSYFVTKNYEIGHAIWDXMHQKGCCPD 411
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 26/317 (8%)
Query: 116 VHDVGRAINAFYAYKRFKFAV----GIEDFQGLL-SALCRYKNVQDAEHLMFC---NKDV 167
V V + I+ +A R AV G+ L+ L R+K+ A FC +
Sbjct: 66 VERVCKVIDELFALDRNMEAVLDECGVRLSHDLVVDMLQRFKHAXPAFRF-FCWAGKRPG 124
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL 224
F +++++N ++ C ++G +R+ E + EM + G+ + +FS I +++A
Sbjct: 125 FDHDSRTYNCMM---C-VLGRTRQFETMVAMLEEMGEMGL-LTMETFSVAIKTFAEANQR 179
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK-----SMEEKGVAPNVV 279
K +FD MK+ + V N ++ +L+ +L K+A ++ + M ++G P++V
Sbjct: 180 KKAAGIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWNEMIDRGFKPDIV 239
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESM 336
+N +++ L K +K D A + F+ M + SP +R+Y + + EV ++ M
Sbjct: 240 AHNVMLEGLLKCKKSD-AXKLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEM 298
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
CQP Y LI F ++ V+ + E+ + G PD +Y ALI
Sbjct: 299 VDRECQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMP 358
Query: 397 EEAHQYYMEMKEKQLLP 413
++A + Y +M + + P
Sbjct: 359 DDAVRIYKKMSQSGIKP 375
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 177/367 (48%), Gaps = 9/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y+ ++ L + + A ++ +MRG P+ VT TL+ R +
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
R ++ K + F +++ LC+ ++ A + + + P + S+N
Sbjct: 65 ERVVSLMREEGNAK--PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNT 121
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G+C + G E+ V+ EM+QRG+ DVV+F+ +I KA NL + + L QM+
Sbjct: 122 LLSGYCKV-GCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + + A+I K + DA+ ++ M + G+ P+VV YN+LI CK ++D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R+ EM + + P + TY + + G + F L + M K G P TY LI+
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ + +++ + + G PD +YT LI G +E+A + EM K +LP+
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 415 PKTDELL 421
T +L
Sbjct: 361 VVTYSVL 367
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 164/335 (48%), Gaps = 8/335 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH---LMFCN 164
IL+R CA + A+ + A + L++A CR + AE LM
Sbjct: 15 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 74
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ P N +FN ++NG C G A +V+ EM + G+ DVVS++ ++S Y K L
Sbjct: 75 GNAKP-NLVTFNSMVNGLCKA-GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 132
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
H+ L +F +M + G+ D + ++IHA K ++ A++L+ M E+G+ N VT+ +L
Sbjct: 133 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 192
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGC 341
I CK LD+A A +EM + GI P++ Y+A ++ + G L+ M
Sbjct: 193 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY +I + + + F++ ++ + G PD +Y++LI L +L +A +
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+ M + + P+ T L D + VE+ ++
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 347
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 165/401 (41%), Gaps = 60/401 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++M+ L K + + A + DEM P +V+ TLL YC V + ++ F
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL---SGYCKVGCLHESLAVFS 140
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---------------------FCNKD 166
+ + F L+ A C+ N++ A L+ FC K
Sbjct: 141 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 200
Query: 167 VFP---------------FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+ +N ++NG+C + G A + EM + + DVV++
Sbjct: 201 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL-GRMDLARELIREMEAKRVKPDVVTY 259
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S IIS Y K NL +L +M + G+ D Y+++I L + + + DA L ++M +
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGE 327
GV P+ TY +LI CK +++A DEM+++G+ P + TY ++ + RT +
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART-K 378
Query: 328 EVFGLLESMRKMGCQPTNDTY---------------IMLIKKFSRWRQFGNVFKVWNEIS 372
E LL + P N Y + L+K F KV+ +
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ D S Y+ LIH G + +A ++ +M P
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 479
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 43/284 (15%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G+ +V +++ ++ L + + + M+ G + YN ++ A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 259 VKDAISLMKSMEEKGVA-PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ A ++ M E+G A PN+VT+NS++ LCKA +++ AR+ FDEM++ G++P + +Y+
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
LL K+GC V++E+++ G
Sbjct: 121 T-------------LLSGYCKVGC-------------------LHESLAVFSEMTQRGLV 148
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
PD ++T+LIHA G LE+A +M+E+ L T L D K F++ + +
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 438 LK-----AHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRV 471
++ QP +I+ + D RE +++ E +RV
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 65/339 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G S Y+ +I K+ + D A LI EM P +VT T+ I YC V
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI---ISGYCKV 269
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
++ A + + L+ LC K + DA L + D F +
Sbjct: 270 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 329
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA---RNLHKV 227
T +++G C G+ +A + EM ++G+ DVV++S +I+ SK+ + H++
Sbjct: 330 TT-----LIDGHCKE-GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Query: 228 L-RLFDQ--------------------------------MKRMGIECDR----------- 243
L +L+ + MK + E D+
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443
Query: 244 ---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
VY+ +IH +G V+ A+S K M G +PN + SL++ L + + EA A
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 503
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
++L A +D+ R V L++ + M
Sbjct: 504 IQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGM 542
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 160/329 (48%), Gaps = 22/329 (6%)
Query: 109 LIRRYCAVHDVGRAINAFY-AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF----- 162
L++ C VG A++ +G+ + LL LC + ++A L+
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184
Query: 163 ----CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C+ DV S+NI++NG+ N G +A +++EM G+ DVV+++ II
Sbjct: 185 QDSSCSPDVV-----SYNIVINGFFNE-GQVDKAYSLFLEM---GVSPDVVTYNTIIDGL 235
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
KA+ + + +F QM G++ + YN +I L K + V A + + M +KGV P+
Sbjct: 236 CKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLES 335
VTYN++I LCKA+ +D A F +M+ RG+ P TY+ +D + + + G+ +
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M G +P N TY ++I + + V+ ++ + G P+ +Y LIH G+
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
EE Q EM L P+ T LL D+
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 56 GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA 115
G+ S + Y+ +I + D A++L EM P +VT T+ I C
Sbjct: 184 GQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTI---IDGLCK 237
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
+V RA + F + ++ LC+ + V AE + +K V P N
Sbjct: 238 AQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNV- 296
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N I++G C R AE V+ +M RG+ D V+++ II KA+ + K +F Q
Sbjct: 297 TYNTIIDGLCKAQAVDR-AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G++ D Y +I L K + V A + + M +KGV PN TYN LI +
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+E Q EM + P + TY LD + + G+ E L +SM + G +P+ Y +
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ + + + + N + NG P+ + +I A ++E +++MK++
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535
Query: 411 LLPEPKTDELLQD 423
L P T L D
Sbjct: 536 LSPNVVTYGTLID 548
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 169/369 (45%), Gaps = 10/369 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y M+ GK L++ M P+ T++ + + +V
Sbjct: 465 GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEV 524
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNI 177
++ F K+ + + + L+ ALC+ V DA + N+ V P N FN
Sbjct: 525 ---MHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP-NNVVFNS 580
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G C + + E +++EM +GI D+V F+ ++ K + + RL D M M
Sbjct: 581 LVYGLCTV-DKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM 639
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G++ D YN +I + +A+ L+ M G+ PN+V+YN+L+ CKA ++D A
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F EML++G++P + TY+ L+ + R+G E L +M K + TY +++
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + F FK++ + D ++ +I LF G+ E+A + + L+P
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819
Query: 415 PKTDELLQD 423
T L+ +
Sbjct: 820 VVTYRLIAE 828
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM- 234
N +L G C+ + +M + G VVS++ ++ R + L M
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV 182
Query: 235 --KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ D YN VI+ V A SL M GV+P+VVTYN++I LCKA+
Sbjct: 183 DGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQ 239
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYI 349
++D A F +M+++G+ P TY+ +D + +EV G+ + M G +P+N TY
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I + + V+ ++ + G PD +Y +I L +++A + +M +K
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359
Query: 410 QLLPEPKTDELLQDWSYNKQFVER 433
+ P+ T ++ D Q V+R
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDR 383
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 147/364 (40%), Gaps = 49/364 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ G + + Y T+I L K+ + D A ++M P+ V
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVV-------------- 577
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKS 174
F L+ LC + E L N+ + P +
Sbjct: 578 ------------------------FNSLVYGLCTVDKWEKVEELFLEMLNQGIRP-DIVF 612
Query: 175 FNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
FN +L CN+ R EA R+ M G+ DV+S++ +I + A + + ++L D
Sbjct: 613 FNTVL---CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD 669
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G++ + YN ++H K + +A L + M KGV P V TYN+++ L ++
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYI 349
+ EAR+ + M++ +I TY LD +E F + +S+ M Q T+
Sbjct: 730 RFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFN 789
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++I + + + ++ I NG P +Y + L G LEE + M++
Sbjct: 790 IMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKS 849
Query: 410 QLLP 413
P
Sbjct: 850 GTAP 853
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 132/322 (40%), Gaps = 19/322 (5%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WE FL Q G ++T++ L K + A LID M P +++
Sbjct: 591 WEKVEELFLEMLNQ-GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
TL I +C + A+ I + LL C+ + +A L
Sbjct: 650 TL---IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
K V P +++N ILNG G EA +++ M + + + ++S I+ + K
Sbjct: 707 LRKGVTP-GVETYNTILNGLFRS-GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNN 764
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ ++F + M ++ D +N +I L KG +DA+ L ++ G+ P+VVTY
Sbjct: 765 CFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYR 824
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEEVFGLLES 335
+ + L + L+E F M + G +P +A + +I R G + L E
Sbjct: 825 LIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884
Query: 336 MRKMGCQPTNDTYIMLIKKFSR 357
+ T+ MLI FSR
Sbjct: 885 NFSLEASTTS----MLISLFSR 902
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV---KDAIS----LMKSMEEKGVAP 276
LH L+LFD++ + N ++ +++ + K A+S +++ K VAP
Sbjct: 24 LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK-VAP 82
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTI--RTYHAFLDIIRTGEEVFGL 332
+ TY+ +I C+ +L+ AF +L+ G + + + D R GE + L
Sbjct: 83 DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVL 142
Query: 333 LESMRKMGCQPTNDTYIMLIKKFS---RWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
L M ++GC+ +Y L+K R + + + + ++ PD SY +I+
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
F G++++A+ ++EM + P+ T + D Q V+R
Sbjct: 203 FFNEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDR 243
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 180/383 (46%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST +++ ++ + K +++ T ++L ++M P + TL ILI +C ++ G A
Sbjct: 66 STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV---YTLNILINSFCHLNRPGFAF 122
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ LC + DA HL +K + F N ++ ++N
Sbjct: 123 SVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLF--DKMIGEGFQPNVVTYGTLIN 180
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q DVV ++ II K R + + LF +M GI
Sbjct: 181 GLCKV-GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 239
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D Y ++IH+L K +L+ M + P+VV +++++ LCK K+ EA
Sbjct: 240 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 299
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M+ RG+ P + TY+A +D + +E + ++M G P +Y LI + +
Sbjct: 300 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 359
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ + P+ +Y L+H L G+L++A + EM +P+ T
Sbjct: 360 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ K ++ +A LK
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKT 442
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 160/362 (44%), Gaps = 16/362 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L +M G P + T +L+ + C V +N
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ + +A + M + V P N ++N +++G C +
Sbjct: 270 NSKIMPDVV---IFSTVVDALCKEGKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHC-L 324
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M G +V+S++ +I+ Y K + + K LF++M + + +
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN ++H L ++DAI+L M G P++ TY L+ LCK LDEA +
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444
Query: 306 QRGISPTIRTYHAFLD-IIRTGE-----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+ P I+ Y +D + R GE ++F L S G +P TY ++I R
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS---KGLRPNVRTYTIMINGLCRRG 501
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
K++ E+ NG PD +Y + L N + A Q EM + + T
Sbjct: 502 LLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTT 561
Query: 420 LL 421
LL
Sbjct: 562 LL 563
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 19/411 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAIL 75
+ N+++ GI ++ +++ + F F + A + G T + T+I L
Sbjct: 88 SLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL 147
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K A L D+M G P++VT T LI C V + AI + ++
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGT---LINGLCKVGNTNAAIRLLRSMEQGNCQ 204
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ + ++ +LC+ + V +A +L + D+F + + +++ CN+
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS-----LIHSLCNLC-EW 258
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+ + +M I DVV FS ++ K + + + D M G+E + YNA+
Sbjct: 259 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ + +A+ + +M G APNV++YN+LI CK +++D+A F+EM Q+ +
Sbjct: 319 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378
Query: 310 SPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P TY+ + + G ++ L M G P TY +L+ +
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ I + PD YT +I + G+LE A + + K L P +T
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 489
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 7/251 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+GYA + Y+T+I K+++ D A L +EM E P+ VT TL+ C V
Sbjct: 340 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM---HGLCHVG 396
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ AI F+ + ++ LL LC+ ++ +A L+ ++ P + + +
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP-DIQIY 455
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I+++G C G A ++ +S +G+ +V +++ +I+ + L + +LF +M
Sbjct: 456 TIVIDGMCRA-GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D YN + L + + AI L++ M +G + +V T L++ LC +
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQ 574
Query: 296 EARQAFDEMLQ 306
+Q E +Q
Sbjct: 575 SVKQILSEFVQ 585
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ T++ L K K A ++D M RG E P++VT L+ +C ++ A+
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGVE--PNVVTYNALM---DGHCLQSEMDEAVKV 334
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F +A + + L++ C+ + + A +L C K++ P NT ++N +++G C
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYNTLMHGLC 393
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL------------- 230
++ G ++A ++ EM G D+ ++ ++ K +L + + L
Sbjct: 394 HV-GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452
Query: 231 ----------------------FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
F + G+ + + Y +I+ L + L+ +A L
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
M+ G +P+ TYN++ + L + ++ A Q EML RG S + T ++++
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 41/214 (19%)
Query: 218 YSKARN---LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+SK+ N L L F++M M +N ++ ++AK + SL M+ G+
Sbjct: 39 HSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGI 98
Query: 275 APNVVTYN-----------------------------------SLIKPLCKARKLDEARQ 299
P+V T N +LI+ LC K+ +A
Sbjct: 99 PPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALH 158
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFS 356
FD+M+ G P + TY ++ + + G LL SM + CQP Y +I
Sbjct: 159 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 218
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ RQ F +++++ G PD +YT+LIH+L
Sbjct: 219 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 179/369 (48%), Gaps = 14/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G P++V T+ I C V V
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI---IDSMCKVKLV 241
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SF 175
A + F + + + L+S C ++DA L NK + N K +F
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF--NKMILE-NIKPDVYTF 298
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++N +C G +E + V+ M ++GI + V+++ ++ Y + ++K +F+ M
Sbjct: 299 NILVNAFCKD-GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ D + Y+ +I+ K + +A++L K M K + P+VVTY+SLI L K+ ++
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
A Q D+M RG+ P I TY++ LD + +V LL + G QP TY +LI
Sbjct: 418 YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K + + + KV+ ++ G D +YT +I + G EA +M++ +
Sbjct: 478 KGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 413 PEPKTDELL 421
P+ KT E++
Sbjct: 538 PDAKTYEII 546
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 185/413 (44%), Gaps = 34/413 (8%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
RN AF F K G ++ YHT++ + K+ E RG P+LV
Sbjct: 79 RNTTPPAFEF----NKILGSLVKSKHYHTVLYLSQKM-----------EFRG--IKPNLV 121
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
ILI +C + + A + F + + F L LC +Q A +
Sbjct: 122 NCN---ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA--FL 176
Query: 162 FCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
F +K V F F+ S+ +++G C + G +R A + + + +VV ++ II
Sbjct: 177 FHDKVVALGFHFDQISYGTLIHGLCKV-GETRAALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K + +++ LF +M GI D Y+A+I +KDAI L M + + P+V
Sbjct: 236 CKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDV 295
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
T+N L+ CK K+ E + FD M+++GI P TY++ +D +++ + + +
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G P +Y ++I F + ++F ++ E+ PD +Y++LI L +G+
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL-----KAHQP 443
+ A Q +M ++ + P T + D V++ IA L K QP
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 172/349 (49%), Gaps = 10/349 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I + KV+ + A+ L EM P +VT L I +C + + AI+ F
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL---ISGFCILGKLKDAIDLFN 284
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ F L++A C+ +++ + + M + + P N ++N +++G+C +
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP-NFVTYNSLMDGYC-L 342
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A+ ++ M+Q G+ D+ S+S +I+ + K + + + LF +M R I D
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+++I L+K + A+ L+ M ++GV PN+ TYNS++ LCK ++D+A +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G P I TY + + ++G E+ + E + G Y ++I+ F F
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ +++ +NG PD +Y +I +LF + + A + EM + L
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 108/234 (46%), Gaps = 3/234 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ + +R F+ I+ K+++ H VL L +M+ GI+ + N +I
Sbjct: 68 DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + L+ A S+ + + G P+ +T+ +L K LC ++ +A D+++ G
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187
Query: 311 PTIRTYHAFL-DIIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+Y + + + GE LL+ + QP Y +I + + F +
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++E+ G PD +Y+ALI + GKL++A + +M + + P+ T +L
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---------- 107
Q G + Y MI K++KFD A L EM P +VT +L+
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
++ +HD G N I + +L ALC+ V A L+ KD
Sbjct: 418 YALQLVDQMHDRGVPPN-------------ICTYNSILDALCKTHQVDKAIALLTKFKDK 464
Query: 168 -FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
F + +++I++ G C G +A +V+ ++ +G DV +++ +I + ++
Sbjct: 465 GFQPDISTYSILIKGLCQ-SGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE 523
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
L L +M+ G D K Y +I +L K A L++ M +G+ N
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 54/365 (14%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T ILI C + A + F V F LL LC K
Sbjct: 86 EVTPNLCTYG---ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCN----------------------- 184
DA ++ C +VF S+NI+L G C+
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 185 -------II------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+I G +A + EM RGI +VV++S II+ KA+ + K + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M + G+ + + YN+++H K+AI +K M GV P+VVTYNSL+ LCK
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+ EAR+ FD M +RG+ P I TY L T E+ GLL+ M + G P + +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI +++ + V++++ + G PD +Y +I L +G++E+A +Y+ +M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
Query: 409 KQLLP 413
++L P
Sbjct: 438 ERLSP 442
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 15/325 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
ILI Y V +A+ F ++ + ++ LC+ V+DA ++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N +N +++ C I +A+ + +EM RGIC D + F+ II + K +
Sbjct: 439 RLSPGNI-VYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +LFD M R+G++ D Y+ +I + +A L+ SM G+ P+ VTYN+LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTG---EEVFGLLESMRK 338
CK ++++A F EM G+SP I TY+ L + RT E G+ ES
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--- 613
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G Q TY +++ + +++ + + ++ +I AL G+ +E
Sbjct: 614 -GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + + L+P+ +T L+ +
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAE 697
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 160/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K D A + +MR P VT T++ ++ + V D A+ F
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED---AMRYFE 433
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ + G + L+ +LC + A+ L+ D +T FN I++ C
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE- 492
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ D++++S +I Y A + + +L M +G++ D Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++DA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + +E + +++ Q T+ ++I + +
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ +S NG PD +Y+ + L G LEE ++ M+E
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI---IAALCKAQAMDKAMEVLT 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 317 NGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 300 AFDEMLQRGISPTIRTYHAF-----------------LDIIRTG---EEVF--------- 330
F++M+ +SP Y++ L+++ G + +F
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 331 ---------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
L + M ++G +P TY LI + + K+ + G PD
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y LI+ ++E+A + EM+ + P+
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY + + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A L+ M P VT TL I YC + + A+ F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL---INGYCKISRMEDALVLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWC--N 184
+ + I + +L L + + A+ L + + ++NIIL+G C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + EA R++ + + + +F+ +I K + LF + G+ D +
Sbjct: 634 L---TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ + L + L+++ L SMEE G N NS+++ L + + A +
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 305 LQRGISPTIRTYHAFLDIIRTGE 327
++ S T FLD++ G+
Sbjct: 751 DEKHFSLEASTASLFLDLLSGGK 773
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I YC + A + + L++ C+ ++DA
Sbjct: 512 PDIITYSTL---IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P + ++NIIL G ++ A+ +++ +++ G ++ +++ I+
Sbjct: 569 LVLFREMESSGVSP-DIITYNIILQGLFQTRRTA-AAKELYVGITESGTQLELSTYNIIL 626
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K +A L ++ G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G + R ++ + DI R G
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746
Query: 329 VF 330
+F
Sbjct: 747 LF 748
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 54/365 (14%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T ILI C + A + F V F LL LC K
Sbjct: 86 EVTPNLCTYG---ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCN----------------------- 184
DA ++ C +VF S+NI+L G C+
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 185 -------II------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+I G +A + EM RGI +VV++S II+ KA+ + K + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M + G+ + + YN+++H K+AI +K M GV P+VVTYNSL+ LCK
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+ EAR+ FD M +RG+ P I TY L T E+ GLL+ M + G P + +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI +++ + V++++ + G PD +Y +I L +G++E+A +Y+ +M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
Query: 409 KQLLP 413
++L P
Sbjct: 438 ERLSP 442
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 15/325 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
ILI Y V +A+ F ++ + ++ LC+ V+DA ++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N +N +++ C I +A+ + +EM RGIC D + F+ II + K +
Sbjct: 439 RLSPGNI-VYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +LFD M R+G++ D Y+ +I + +A L+ SM G+ P+ VTYN+LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTG---EEVFGLLESMRK 338
CK ++++A F EM G+SP I TY+ L + RT E G+ ES
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--- 613
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G Q TY +++ + +++ + + ++ +I AL G+ +E
Sbjct: 614 -GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + + L+P+ +T L+ +
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAE 697
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 160/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K D A + +MR P VT T++ ++ + V D A+ F
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED---AMRYFE 433
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ + G + L+ +LC + A+ L+ D +T FN I++ C
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE- 492
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ D++++S +I Y A + + +L M +G++ D Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++DA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + +E + +++ Q T+ ++I + +
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ +S NG PD +Y+ + L G LEE ++ M+E
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI---IAALCKAQAMDKAMEVLT 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 317 NGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 300 AFDEMLQRGISPTIRTYHAF-----------------LDIIRTG---EEVF--------- 330
F++M+ +SP Y++ L+++ G + +F
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 331 ---------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
L + M ++G +P TY LI + + K+ + G PD
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y LI+ ++E+A + EM+ + P+
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY + + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A L+ M P VT TL I YC + + A+ F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL---INGYCKISRMEDALVLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWC--N 184
+ + I + +L L + + A+ L + + ++NIIL+G C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + EA R++ + + + +F+ +I K + LF + G+ D +
Sbjct: 634 L---TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ + L + L+++ L SMEE G N NS+++ L + + A +
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 305 LQRGISPTIRTYHAFLDIIRTGE 327
++ S T FLD++ G+
Sbjct: 751 DEKHFSLEASTASLFLDLLSGGK 773
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I YC + A + + L++ C+ ++DA
Sbjct: 512 PDIITYSTL---IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P + ++NIIL G ++ A+ +++ +++ G ++ +++ I+
Sbjct: 569 LVLFREMESSGVSP-DIITYNIILQGLFQTRRTA-AAKELYVGITESGTQLELSTYNIIL 626
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K +A L ++ G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G + R ++ + DI R G
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746
Query: 329 VF 330
+F
Sbjct: 747 LF 748
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 146/276 (52%), Gaps = 7/276 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL LC Q+A L+ D P + S+ ++NG+ G +A + EM
Sbjct: 168 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE-GDLDKAYGTYHEML 226
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RGI +VV++S II+ KA+ + K + + M + G+ + + YN+++H K
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+ P I TY L
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 321 DIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
T E+ GLL+ M + G P + + +LI +++ + V++++ + G
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PD +Y +I L +G++E+A +Y+ +M +++L P
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 19/334 (5%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T ILI C + A + F V F LL LC K
Sbjct: 86 EVTPNLCTYG---ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY- 206
DA ++ C +VF S+NI+L G C+ S E + M G C
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVVS++ +I+ + K +L K + +M GI + Y+++I AL K + + A+ ++
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
SM + GV PN TYNS++ C + + EA +M G+ P + TY++ +D + +
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G E + +SM K G +P TY L++ ++ + + + + NG P+ +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ LI A GK+++A + +M+++ L P+ T
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY + + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 19/262 (7%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 201 SYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI---IAALCKAQAMDKAMEVL 257
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNII 178
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R G
Sbjct: 316 KNGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I + V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 299 QAFDEMLQRGISPTIRTYHAFL 320
+ F++M+ +SP Y++ +
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLI 451
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 7/236 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA L K + D A ++ M P+ T ++ + YC+ AI
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI---VHGYCSSGQPKEAIGFLK 293
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + L+ LC+ +A + + + P ++ +L G+
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP-EITTYGTLLQGYATK 352
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI + FS +I Y+K + + + +F +M++ G+ D
Sbjct: 353 -GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y VI L K V+DA+ + M ++ ++P + YNSLI LC K D+A+ F
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF 467
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 54/365 (14%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T ILI C + A + F V F LL LC K
Sbjct: 86 EVTPNLCTYG---ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCN----------------------- 184
DA ++ C +VF S+NI+L G C+
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 185 -------II------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+I G +A + EM RGI +VV++S II+ KA+ + K + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M + G+ + + YN+++H K+AI +K M GV P+VVTYNSL+ LCK
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+ EAR+ FD M +RG+ P I TY L T E+ GLL+ M + G P + +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI +++ + V++++ + G PD +Y +I L +G++E+A +Y+ +M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
Query: 409 KQLLP 413
++L P
Sbjct: 438 ERLSP 442
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 19/327 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI-- 436
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++ C I +A+ + +EM RGIC D + F+ II + K
Sbjct: 437 DERLSPGNI-VYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D Y+ +I + +A L+ SM G+ P+ VTYN+
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTG---EEVFGLLESM 336
LI CK ++++A F EM G+SP I TY+ L + RT E G+ ES
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES- 613
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G Q TY +++ + +++ + + ++ +I AL G+
Sbjct: 614 ---GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQD 423
+EA + + L+P+ +T L+ +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE 697
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 160/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K D A + +MR P VT T++ ++ + V D A+ F
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED---AMRYFE 433
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ + G + L+ +LC + A+ L+ D +T FN I++ C
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE- 492
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ D++++S +I Y A + + +L M +G++ D Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++DA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + +E + +++ Q T+ ++I + +
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ +S NG PD +Y+ + L G LEE ++ M+E
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 158/361 (43%), Gaps = 22/361 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI---IAALCKAQAMDKAMEVLT 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 317 NGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 300 AFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F++M+ +SP Y++ L I ++ L+ M G + +I
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + K+++ + G PD +Y+ LI L GK++EA + M + P+
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 417 T 417
T
Sbjct: 551 T 551
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY + + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I YC + A + + L++ C+ ++DA
Sbjct: 512 PDIITYSTL---IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P + ++NIIL G ++ A+ +++ +++ G ++ +++ I+
Sbjct: 569 LVLFREMESSGVSP-DIITYNIILQGLFQTRRTA-AAKELYVGITESGTQLELSTYNIIL 626
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K +A L ++ G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G + R ++ + DI R G
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746
Query: 329 VF 330
+F
Sbjct: 747 LF 748
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A L+ M P VT TL I YC + + A+ F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL---INGYCKISRMEDALVLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWC--N 184
+ + I + +L L + + A+ L + + ++NIIL+G C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + EA R++ + + + +F+ +I K + LF + G+ D +
Sbjct: 634 L---TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ + L + L+++ L SMEE G N NS+++ L + + A +
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 305 LQRGISPTIRTYHAFLDIIRTGE 327
++ S T FLD++ G+
Sbjct: 751 DEKHFSLEASTASLFLDLLSGGK 773
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 174/381 (45%), Gaps = 8/381 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ ++ + K++ + T +L +M P++ TL ILI +C ++ VG A
Sbjct: 55 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV---YTLNILINSFCHLNRVGFAF 111
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGW 182
+ + F L+ LC + +A HL D F N ++ ++NG
Sbjct: 112 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 171
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C + G++ A R+ M Q DVV ++ II K R + + LF QM GI D
Sbjct: 172 CKV-GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +++HAL K +L+ M + P+VV +++++ LCK K+ EA + D
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290
Query: 303 EMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+QRG+ P + TY +D + +E + + M + G P +Y LI + +
Sbjct: 291 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 350
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++ E+ PD +Y L+H L G+L++A + EM + +P+ T
Sbjct: 351 KIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 410
Query: 420 LLQDWSYNKQFVERQIASLKA 440
+L D +E +A LKA
Sbjct: 411 ILLDSLCKNCHLEEAMALLKA 431
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L +M G P + T +L+ + C V +N
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A + M + V P + ++ +++G C +
Sbjct: 259 NSKILPDVV---IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP-DVVTYTTLMDGHC-L 313
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M ++G DV+S++ +I+ Y K + K + LF++M R D K
Sbjct: 314 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 373
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN ++H L ++DAI+L M +G P++VTY+ L+ LCK L+EA +
Sbjct: 374 YNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIE 433
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++P I+ Y+ +D + R G E L ++ G P+ TY ++I +
Sbjct: 434 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 493
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K++ E+ N PD +Y + N + A Q EM + + T LL
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLL 552
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 46/295 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ T++ L K K A ++D M RG E P +VT TL+ +C ++ A+
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGVE--PDVVTYTTLM---DGHCLQSEMDEAVKV 323
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F R FA + + L++ C+ + A +L C K+ P +TK++N +++G C
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYNTLMHGLC 382
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK---------------ARNLHKVL 228
++ G ++A ++ EM RG D+V++S ++ K A NL+ +
Sbjct: 383 HV-GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441
Query: 229 RLF----DQMKRMG-IECDRKV---------------YNAVIHALAKGRLVKDAISLMKS 268
+++ D M R G +E R + YN +IH L K L+ +A L
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
M+ +P+ TYN++ + + + A Q +EML RG S + T ++++
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
+ DA+S + P++V + L+ + K + +M G+ P + T
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++F + R G F +L + K+G QP T+ LI+ + G +++++ +
Sbjct: 97 LINSFCHLNRVG-FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P+ +Y LI+ L G A + M++ P+
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 195
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 186/382 (48%), Gaps = 13/382 (3%)
Query: 60 GYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G A + Y+ ++ A+ G+ + + A +++ +MRG GP++VT TL+ R V
Sbjct: 185 GVAPNVYTYNILVRALCGRGHRKE-ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 243
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
R + + + F +++ +C+ ++DA + + + P + S+N
Sbjct: 244 AERLVGMM---REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP-DGVSYN 299
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+C G S EA V+ EM+Q+GI DVV+F+ +I KA NL + + L QM+
Sbjct: 300 TLVGGYCKA-GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE 358
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ + + A+I K + DA+ ++ M++ + P+VV YN+LI C ++DE
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIK 353
AR+ EM +G+ P + TY + F L + M + G P TY LI+
Sbjct: 419 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 478
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + ++ + + G PD +YT+LI G +E A + +M + +LP
Sbjct: 479 VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538
Query: 414 EPKT-DELLQDWSYNKQFVERQ 434
+ T L+ S + + +E Q
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQ 560
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 177/382 (46%), Gaps = 11/382 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY S Y+ ++ L +A D M P++ T IL+R C
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYN---ILVRALCGRGHR 206
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A++ + + + L++A R V AE L M + P N +FN
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKP-NLVTFNS 265
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C G +A +V+ EM + G+ D VS++ ++ Y KA H+ L +F +M +
Sbjct: 266 MVNGMCKA-GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK 324
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D + ++IH + K ++ A++L++ M E+G+ N VT+ +LI CK LD+A
Sbjct: 325 GIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
A M Q I P++ Y+A ++ ++ +E LL M G +P TY +I
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + F++ ++ E G PD +Y++LI L +L +AH + M + L P+
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPD 504
Query: 415 PKTDELLQDWSYNKQFVERQIA 436
T L D + VE ++
Sbjct: 505 EFTYTSLIDGHCKEGNVESALS 526
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 173/441 (39%), Gaps = 79/441 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + +++M+ + K K + A + DEM P V+ TL + YC
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTL---VGGYCKA 308
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--------------- 161
A++ F + + F L+ +C+ N++ A L+
Sbjct: 309 GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTF 368
Query: 162 ------FCNKDVF----------------PFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
FC K P + +N ++NG+C ++G EA + EM
Sbjct: 369 TALIDGFCKKGFLDDALLAVRGMKQCRIKP-SVVCYNALINGYC-MVGRMDEARELLHEM 426
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+G+ DVV++S IIS Y K + H L QM G+ D Y+++I L + +
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
DA L K+M + G+ P+ TY SLI CK ++ A D+M++ G+ P + TY
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546
Query: 320 LDIIRTGEEVFGLLESMRKMGCQ------------PTNDTY---------------IMLI 352
++ GL +S R M Q P N Y + L+
Sbjct: 547 IN---------GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALL 597
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K F KV+ + + D S Y+ LIH G + +A ++ +M +
Sbjct: 598 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFA 657
Query: 413 P-EPKTDELLQDWSYNKQFVE 432
P T L++ N VE
Sbjct: 658 PNSTSTISLIRGLFENGMVVE 678
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 142/310 (45%), Gaps = 14/310 (4%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+ F+ ++ + ++ + A G V++++ ++ S A +L R FD
Sbjct: 121 RPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLALSDA-SLTSARRFFD 179
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G+ + YN ++ AL K+A+S+++ M G PNVVTYN+L+ +A
Sbjct: 180 SMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAG 239
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
++D A + M + G+ P + T+++ ++ + + G E+ + + M + G P +Y
Sbjct: 240 EVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYN 299
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ + + V+ E+++ G PD ++T+LIH + G LE A +M+E+
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER 359
Query: 410 QLLPEPKTDELLQDWSYNKQFVERQIASLKAHQP----------QSGQNTRVISKKSDQD 459
L T L D K F++ + +++ + + N + + D+
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEA 419
Query: 460 REFLQQPETR 469
RE L + E +
Sbjct: 420 RELLHEMEAK 429
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 130/346 (37%), Gaps = 66/346 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ S Y+ +I V + D A L+ EM P +VT T++ + C
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
H +AF ++ + D + L+ LC K + DA H++F N
Sbjct: 452 H------SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA-HVLFKNMIKLGLQPD 504
Query: 174 SFNI--ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR--------- 222
F +++G C G+ A + +M + G+ DVV++S +I+ SK+
Sbjct: 505 EFTYTSLIDGHCKE-GNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Query: 223 -------------------------NLHKVLRLFDQ--MKRMGIECDR------------ 243
L VL L MK + E D+
Sbjct: 564 FKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 623
Query: 244 --KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
VY+ +IH + V A+S K M + G APN + SLI+ L + + EA Q
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Query: 302 DEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPT 344
++L A +D+ + G + V +L M K G P+
Sbjct: 684 QQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 146/276 (52%), Gaps = 7/276 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL LC Q+A L+ D P + S+ ++NG+ G +A + EM
Sbjct: 168 LLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE-GDLDKAYGTYHEML 226
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RGI +VV++S II+ KA+ + K + + M + G+ + + YN+++H K
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+ P I TY L
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 321 DIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
T E+ GLL+ M + G P + + +LI +++ + V++++ + G
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PD +Y +I L +G++E+A +Y+ +M +++L P
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 19/334 (5%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T IL+ C + A + F V F +L LC K
Sbjct: 86 EVTPNLCTYG---ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY- 206
DA ++ C +VF S+NI+L G C+ S E + M G C
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPP 197
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVVS++ +I+ + K +L K + +M GI + Y+++I AL K + + A+ ++
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
SM + GV PN TYNS++ C + + EA +M G+ P + TY++ +D + +
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G E + +SM K G +P TY L++ ++ + + + + NG P+ +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ LI A GK+++A + +M+++ L P+ T
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 19/327 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI-- 436
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++ C I +A+ + +EM RGIC D + F+ II + K
Sbjct: 437 DERLSPGNI-VYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D Y+ +I + +A L+ SM G+ P+ VTYN+
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTG---EEVFGLLESM 336
LI CK ++++A F EM G+SP I TY+ L + RT E G+ ES
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES- 613
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G Q TY +++ + +++ + + ++ +I AL G+
Sbjct: 614 ---GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQD 423
+EA + + L+P+ +T L+ +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE 697
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 160/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K D A + +MR P VT T++ ++ + V D A+ F
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED---AMRYFE 433
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ + G + L+ +LC + A+ L+ D +T FN I++ C
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE- 492
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ D++++S +I Y A + + +L M +G++ D Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++DA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + +E + +++ Q T+ ++I + +
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ +S NG PD +Y+ + L G LEE ++ M+E
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI---IAALCKAQAMDKAMEVLT 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 317 NGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 300 AFDEMLQRGISPTIRTYHAF-----------------LDIIRTG---EEVF--------- 330
F++M+ +SP Y++ L+++ G + +F
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 331 ---------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
L + M ++G +P TY LI + + K+ + G PD
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y LI+ ++E+A + EM+ + P+
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY + + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY L+
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILMG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I YC + A + + L++ C+ ++DA
Sbjct: 512 PDIITYSTL---IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P + ++NIIL G + A+ +++ +++ G ++ +++ I+
Sbjct: 569 LVLFREMESSGVSP-DIITYNIILQGLFQT-RRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K +A L ++ G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G + R ++ + DI R G
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746
Query: 329 VF 330
+F
Sbjct: 747 LF 748
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A L+ M P VT TL I YC + + A+ F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL---INGYCKISRMEDALVLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWC--N 184
+ + I + +L L + + A+ L + + ++NIIL+G C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + EA R++ + + + +F+ +I K + LF + G+ D +
Sbjct: 634 L---TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ + L + L+++ L SMEE G N NS+++ L + + A +
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 305 LQRGISPTIRTYHAFLDIIRTGE 327
++ S T FLD++ G+
Sbjct: 751 DEKHFSLEASTASLFLDLLSGGK 773
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 9/358 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
D A L D+M P++VT TL I YC + + + +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTL---IDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 141 FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ +++ LCR +++ ++ N+ + + ++N ++ G+C G+ +A + EM
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE-GNFHQALVMHAEM 336
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G+ V++++ +I KA N+++ + DQM+ G+ + + Y ++ ++ +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+A +++ M + G +P+VVTYN+LI C K+++A ++M ++G+SP + +Y
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 320 LDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L +V L R+M G +P TY LI+ F R+ ++ E+ G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
PD +YTALI+A + G LE+A Q + EM EK +LP+ T +L + NKQ R+
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN-GLNKQSRTRE 573
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 172/383 (44%), Gaps = 25/383 (6%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
+F L + GY+ Y+T+I K F A + EM PS++T +L
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL--- 351
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVF 168
I C ++ RA+ + + L+ + + +A ++ N + F
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ ++N ++NG C + G +A V +M ++G+ DVVS+S ++S + ++ ++ + L
Sbjct: 412 SPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R+ +M GI+ D Y+++I + R K+A L + M G+ P+ TY +LI
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPT 344
C L++A Q +EM+++G+ P + TY ++ + RT E LL+ + P+
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PS 589
Query: 345 NDTY---------------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ TY + LIK F +V+ + + PD ++Y +IH
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 390 LFLNGKLEEAHQYYMEMKEKQLL 412
G + +A+ Y EM + L
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFL 672
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 169/399 (42%), Gaps = 54/399 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-------------------- 107
Y+T+I K+RK D + L+ M P+L++ ++
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
LI+ YC + +A+ R + + L+ ++C+ N+
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
A + + + P N +++ +++G+ G EA RV EM+ G VV+++
Sbjct: 363 RAMEFLDQMRVRGLCP-NERTYTTLVDGFSQK-GYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I+ + + + + + MK G+ D Y+ V+ + V +A+ + + M EKG
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVF 330
+ P+ +TY+SLI+ C+ R+ EA ++EML+ G+ P TY A ++ + E+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 331 GLLESMRKMGCQPTNDTYIMLI---KKFSRWRQFGNVF------------KVWNEISENG 375
L M + G P TY +LI K SR R+ + ++ + EN
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + S +LI + G + EA Q + M K P+
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 12/285 (4%)
Query: 151 YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+K++Q+ L + VF KS++ + ++I +A + G V+S
Sbjct: 120 FKSLQETYDLCYSTSSVFDLVVKSYSRL-----SLID---KALSIVHLAQAHGFMPGVLS 171
Query: 211 FSCIISCYSKA-RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++ ++ ++ RN+ +F +M + + YN +I + A++L M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-- 326
E KG PNVVTYN+LI CK RK+D+ + M +G+ P + +Y+ ++ + R G
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+EV +L M + G TY LIK + + F + E+ +G P +YT+L
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
IH++ G + A ++ +M+ + L P +T L D K ++
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 69/306 (22%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G++ S Y+ +I K + A A++++M+ P +V+ T+L +C +D
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL---SGFCRSYD 465
Query: 119 VGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDA----EHLMFCNKDVFPF 170
V A+ KR GI+ + L+ C + ++A E ++ + P
Sbjct: 466 VDEALRV----KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML---RVGLPP 518
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK---- 226
+ ++ ++N +C + G +A ++ EM ++G+ DVV++S +I+ +K +
Sbjct: 519 DEFTYTALINAYC-MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 227 VLRLFDQ--------------------------------MKRMGIECDR----------- 243
+L+LF + MK M E D+
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 244 ---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN +IH + ++ A +L K M + G + VT +L+K L K K++E
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 301 FDEMLQ 306
+L+
Sbjct: 698 IVHVLR 703
>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
Length = 527
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 190/443 (42%), Gaps = 18/443 (4%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ + + I V+ +++ +VL++ EA FF WA KQ YH ++
Sbjct: 86 KAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPRDVGSYHVIVKA 145
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LG+ + F ++DEMR L+ L I+I + V +AI F
Sbjct: 146 LGRRKFFVFMMQVLDEMRLNGIKADLLM---LSIVIDSFVNAGHVSKAIQLFGNLDDLGL 202
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
E LLS LCR +V A + K FN ++N+++ GW + G E E+
Sbjct: 203 CRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWSKL-GRVNEIEK 261
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V EM G D + + + +A + + + +F MK E D +YNA+I
Sbjct: 262 VMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMK----EKDTAIYNAMIFNFI 317
Query: 255 KGRLVKDAISLMK---SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ D MK M PN+ TY+ +I + RK+ +A FDEML++G+ P
Sbjct: 318 S---IGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEMLRQGVVP 374
Query: 312 TIRTYHAFL-DIIRTGEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
T +F+ + G ++ + RK+ C+ + + Y +L+ + S++ + G++ VW
Sbjct: 375 PTGTITSFIKQLCSYGPPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKCGSLLSVW 434
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
E+ E G D Y +I L+ G+LE A E K P L +
Sbjct: 435 QEMQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGFCPSRLVYSKLSNKLLAS 494
Query: 429 QFVERQI-ASLKAHQPQSGQNTR 450
ER LK +S +N R
Sbjct: 495 NLTERAYRLFLKIKHARSLKNAR 517
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 178/383 (46%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST ++ ++ + K++ + T +L +M P + TL ILI +C + +G A
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV---YTLNILINSFCHLRRLGYAF 205
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ LC + +A HL +K + F + ++ ++N
Sbjct: 206 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF--DKTIGEGFQPDVVTYGTLMN 263
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q+ +V++++ II K R + + LF +M GI
Sbjct: 264 GLCKV-GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 322
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN++IHAL K +L+ M + PNVV +++++ LCK + A
Sbjct: 323 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 382
Query: 301 FDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M++RG+ P + TY A +D +R+ +E + ++M GC P +Y +LI + +
Sbjct: 383 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 442
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + ++S G D +Y LIH L G+L+ A + EM +P+ T
Sbjct: 443 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ + + LKA
Sbjct: 503 YRILLDYLCKNHHLAEAMVLLKA 525
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 10/355 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T++ L KV A L+ M P+++ T+ I C V
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI---IDSLCKDRQV 306
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A N F + I + L+ ALC + L+ N + P N F+
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP-NVVVFST 365
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G A V M +RG+ DVV+++ ++ + + + +++FD M
Sbjct: 366 VVDALCKE-GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + YN +I+ + + + A+ L++ M +G+ + VTYN+LI LC +L A
Sbjct: 425 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 484
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKK 354
F EM+ G P + TY LD + E LL+++ Y + I
Sbjct: 485 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 544
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
R + +++ +S G PD +Y +IH L G L+EA++ + +M E
Sbjct: 545 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 599
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 158/372 (42%), Gaps = 14/372 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ A+ L EM P + T +L+ + C V +N
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 352
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ + A + M + V P + ++ +++G C +
Sbjct: 353 NSKIMPNVV---VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP-DVVTYTALMDGHC-L 407
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M +G +V S++ +I+ Y + + + K + L +QM G+ D
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH L ++ AI+L M G P++VTY L+ LCK L EA +
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527
Query: 306 QRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ I Y+ +D + R GE L ++ G QP TY ++I +
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD 587
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD---- 418
K++ ++ ENG D Y +I + + A Q EM + + T
Sbjct: 588 EANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIV 647
Query: 419 ELLQDWSYNKQF 430
E+L D ++ F
Sbjct: 648 EMLSDDGLDQSF 659
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 38/228 (16%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV----- 278
L L F++M M + ++ ++AK + +SL M+ G+ P+V
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 279 ------------------------------VTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
T+N+LI+ LC K+ EA FD+ + G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 309 ISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P + TY ++ + + G LL SM + C+P Y +I + RQ F
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++E+ G PD +Y +LIHAL + + EM +++P
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 358
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 178/383 (46%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST ++ ++ + K++ + T +L +M P + TL ILI +C + +G A
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV---YTLNILINSFCHLRRLGYAF 167
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ LC + +A HL +K + F + ++ ++N
Sbjct: 168 SVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF--DKTIGEGFQPDVVTYGTLMN 225
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q+ +V++++ II K R + + LF +M GI
Sbjct: 226 GLCKV-GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 284
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN++IHAL K +L+ M + PNVV +++++ LCK + A
Sbjct: 285 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 344
Query: 301 FDEMLQRGISPTIRTYHAFLD--IIRT-GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M++RG+ P + TY A +D +R+ +E + ++M GC P +Y +LI + +
Sbjct: 345 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + ++S G D +Y LIH L G+L+ A + EM +P+ T
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ + + LKA
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKA 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 13/275 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ A+ L EM P + T +L+ + C V +N
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ + A + M + V P + ++ +++G C +
Sbjct: 315 NSKIMPNVV---VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP-DVVTYTALMDGHC-L 369
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M +G +V S++ +I+ Y + + + K + L +QM G+ D
Sbjct: 370 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 429
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH L ++ AI+L M G P++VTY L+ LCK L EA +
Sbjct: 430 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 489
Query: 306 QRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRKM 339
+ I Y+ +D + R GE LE+ R +
Sbjct: 490 GSNLDADILVYNIAIDGMCRAGE-----LEAARDL 519
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 38/229 (16%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV----- 278
L L F++M M + ++ ++AK + +SL M+ G+ P+V
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 279 ------------------------------VTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
T+N+LI+ LC K+ EA FD+ + G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 309 ISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P + TY ++ + + G LL SM + C+P Y +I + RQ F
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++E+ G PD +Y +LIHAL + + EM +++P
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 182/383 (47%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ ++ + K++ + T +L +M P++ TL ILI +C + +G A
Sbjct: 58 SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI---YTLNILINSFCHLQRLGFAF 114
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + I F L+ LC + + HL +K + F N ++ ++N
Sbjct: 115 SVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLF--DKMIGEGFQPNVVTYGTLIN 172
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + GS+ A R+ M Q DVV ++ II K R + + LF +M GI
Sbjct: 173 GLCKV-GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 231
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN++IHAL K +L+ M + PNVV +++++ LCK K+ EA
Sbjct: 232 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 291
Query: 301 FDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M++RG+ P + TY+A +D +R+ +E + ++M G P +Y LI + +
Sbjct: 292 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 351
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ P+ +Y+ L+H L G+L++A + EM + +P+ +
Sbjct: 352 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ + ++ IA LKA
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKA 434
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L EM PS+ T +L+ + C V +N
Sbjct: 202 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A + M + V P N ++N +++G C +
Sbjct: 262 NSKIMPNVV---IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP-NVVTYNALMDGHC-L 316
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M +G DVVS+S +I+ Y K + + K + LF++M R + +
Sbjct: 317 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 376
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ ++H L ++DAI+L M +G P+ V+Y L+ LCK R+LDEA +
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ P I+ Y +D + R G E L ++ G P TY ++I +
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K++ E+ G P+ +Y + N + Q EM + + T +L
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVL 555
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 39/399 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
G+ + ++T+I L K L D+M G P++VT TL+
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183
Query: 108 --------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+I C V +A N F + I + L+ A
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 243
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC + L+ N + P N F+ +++ C G EA V M +RG+
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKIMP-NVVIFSTVVDALCK-EGKVMEAHDVVDMMIKRGVE 301
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+VV+++ ++ + + + +++FD M G D Y+ +I+ K + ++ A+ L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
+ M K + PN VTY++L+ LC +L +A F EM+ RG P +Y LD +
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R +E LL+++ P Y ++I R + +++ +S G P+ +
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
YT +I+ L G L EA + + EMK K P T L+
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ T++ L K K A ++D M RG E P++VT L+ +C ++ A+
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVE--PNVVTYNALM---DGHCLRSEMDEAVKV 326
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F FA + + L++ C+ + ++ A +L C K++ P NT +++ +++G C
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYSTLMHGLC 385
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
++ G ++A ++ EM RG D VS+ ++ K R L + + L ++ ++ D
Sbjct: 386 HV-GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444
Query: 244 KVYNAVI-----------------------------------HALAKGRLVKDAISLMKS 268
++Y VI + L + L+ +A L
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
M+ KG +PN TYN + + + + Q EML RG S + T ++++
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+A Y T+I K+++ + A L +EM E P+ VT TL+ C V
Sbjct: 334 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM---HGLC---HV 387
Query: 120 GRAINAFYAYKRFKFAVGIEDFQG---LLSALCRYKNVQDAEHLMFC--NKDVFPFNTKS 174
GR +A + I DF LL LC+ + + +A L+ ++ P + +
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP-DIQI 446
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I+++G C G A ++ +S +G+ +V +++ +I+ + L + +LF +M
Sbjct: 447 YTIVIDGMCRA-GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
KR G + YN + + I L++ M +G + +V T L++ L
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 565
Query: 295 DEARQAFDEMLQ 306
+Q E LQ
Sbjct: 566 QSVKQILSEFLQ 577
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
+ DA+S M P++ + L+ + K + +M GI P I T
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++F + R G F +L + K+G QP T+ LI+ + G V +++++
Sbjct: 100 LINSFCHLQRLG-FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE-----PKTDELLQDWSYNKQ 429
G P+ +Y LI+ L G A + M++ P+ D L +D +
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218
Query: 430 F 430
F
Sbjct: 219 F 219
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 172/377 (45%), Gaps = 15/377 (3%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
+D +AA FF WA KQ G+ H+ Y+ + L + R+ D ++ P++ T
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFT 61
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-- 160
++I+ C D+ +A + + ++ ALC+ +N A
Sbjct: 62 YA---VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR 118
Query: 161 -MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
M C K+V ++ I+++G C EA + +M ++G + +++ +I+ +
Sbjct: 119 SMECEKNVI-----TWTIMIDGLCK-ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFC 172
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K +H+ L +MK G+ + Y+ VIH + V A L + M E G PN+V
Sbjct: 173 KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV 232
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESM 336
TYN+L+ LC+ +DEA + DEM +RG+ P +Y + + +TG + + E
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
C P Y LI + + K++ ++ EN PD ++TAL+ L +L
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352
Query: 397 EEAHQYYMEMKEKQLLP 413
+EA Q M+++ P
Sbjct: 353 QEAQQVLETMEDRNCTP 369
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 31/439 (7%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWV--------RNDWEAAFTFFLWAGKQSGYAHS 64
H + RN + S E V++W N A T+F K+ G +
Sbjct: 102 HALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKM-KKKGTVPN 160
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
Y+ +I KV K A+ L+ EM+ P++VT T+ +H R
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV---------IHGFCRQTK 211
Query: 125 AFYAYKRFKFAV------GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
AYK F+ V + + LLS LCR + +A L+ + + P + S++
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQP-DKFSYD 270
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C G A +V+ + S DVV++S +I+ KA L + +LF++M+
Sbjct: 271 TLMAGLCKT-GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE 329
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
E D + A++ L KG +++A ++++ME++ PNV+TY+SLI LCK ++ +
Sbjct: 330 NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 389
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A++ F M+ RGI P + TY++ + + + L+E M GC P TY LI
Sbjct: 390 AQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID 449
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + +++ ++ PD +Y+ LI +++ A + +M ++ +LP
Sbjct: 450 GLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 509
Query: 414 EPKTDELLQDWSYNKQFVE 432
+ T L + N V+
Sbjct: 510 DVVTFSTLVEGYCNAGLVD 528
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 161/389 (41%), Gaps = 50/389 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT-----------------KQTLLILI 110
Y T+IA L K + D A L ++MR P +VT +Q L +
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 111 RRYCAVHDV------------GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNV 154
R C + + G+ +A +KR GIE + L+ C V
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM-IVRGIEPNVVTYNSLIHGFCMTNGV 422
Query: 155 QDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
A LM C D+ +NT +++G C G + EA R++ +M + DV
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNT-----LIDGLCKT-GRAPEANRLFGDMKAKFCNPDV 476
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++SC+I + K + LFD M + + D ++ ++ LV DA L++
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE 327
M +P+V TY SL+ CK ++ EAR+ M +RG P + TY A +D R G+
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 328 EV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYT 384
+ LLE M G QP TY LI F K+ + + N D +Y
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ L G++ A + +K+ P
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPP 685
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 20/358 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+++I D+A L++EM P ++T TL+ +
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID------GLCKT 454
Query: 120 GRA--INAFYAYKRFKFA-VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
GRA N + + KF + + L+ C+ + + A L + V P + +
Sbjct: 455 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVT 513
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+ ++ G+CN G +AER+ EM DV +++ ++ + K + + R+ +M
Sbjct: 514 FSTLVEGYCNA-GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + + Y A+I A + A L++ M GV PNV+TY SLI C L
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 632
Query: 295 DEARQAFDEMLQR--GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+EAR+ E L+R + Y +D + RTG LLE++++ G P +D Y+
Sbjct: 633 EEARKIL-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 691
Query: 350 MLIKKFSRWRQFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
LI+ + ++ G +V E++ + P+ +Y A+I L G+ EEA+ E+
Sbjct: 692 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 164/382 (42%), Gaps = 32/382 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y+T+++ L + D A+ L+DEMR P + TL+ + C
Sbjct: 224 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL---CKTG 280
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+ A+ F + + L++ LC+ + +A L C DV
Sbjct: 281 KIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV--- 337
Query: 172 TKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+F +++G C G +EA++V M R +V+++S +I K + +
Sbjct: 338 --TFTALMDGLCK--GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F +M GIE + YN++IH V A+ LM+ M G P+++TYN+LI LCK
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 453
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL---------DIIRTGEEVFGLLESMRKMGC 341
+ EA + F +M + +P + TY + D+ RT L + M K
Sbjct: 454 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART------LFDDMLKQAV 507
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P T+ L++ + + ++ E+ + PD +YT+L+ G++ EA +
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567
Query: 402 YYMEMKEKQLLPEPKTDELLQD 423
M ++ P T L D
Sbjct: 568 VLKRMAKRGCQPNVVTYTALID 589
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK---FAVGI 138
D A L++EM + P + T +L + +C V GR + A KR +
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSL---VDGFCKV---GRMVEARRVLKRMAKRGCQPNV 581
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ L+ A CR A L+ V P N ++ ++ G+C G EA ++
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP-NVITYRSLIGGFCGT-GDLEEARKIL 639
Query: 197 MEMSQRGIC-YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ + C D+ ++ ++ + + L L + +K+ G +Y A+I L +
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 699
Query: 256 GRLVKDAISLMKSME-EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
G+ + A+ +++ M + PN Y ++I+ L + + +EA DE+L
Sbjct: 700 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 182/383 (47%), Gaps = 12/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ ++ + K++ + T +L +M P++ TL ILI +C + +G A
Sbjct: 67 SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI---YTLNILINSFCHLQRLGFAF 123
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + I F L+ LC + + HL +K + F N ++ ++N
Sbjct: 124 SVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLF--DKMIGEGFQPNVVTYGTLIN 181
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + GS+ A R+ M Q DVV ++ II K R + + LF +M GI
Sbjct: 182 GLCKV-GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 240
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN++IHAL K +L+ M + PNVV +++++ LCK K+ EA
Sbjct: 241 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 300
Query: 301 FDEMLQRGISPTIRTYHAFLD--IIRT-GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M++RG+ P + TY+A +D +R+ +E + ++M G P +Y LI + +
Sbjct: 301 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 360
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ P+ +Y+ L+H L G+L++A + EM + +P+ +
Sbjct: 361 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ + ++ IA LKA
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKA 443
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L EM PS+ T +L+ + C V +N
Sbjct: 211 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A + M + V P N ++N +++G C +
Sbjct: 271 NSKIMPNVV---IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP-NVVTYNALMDGHC-L 325
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M +G DVVS+S +I+ Y K + + K + LF++M R + +
Sbjct: 326 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 385
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ ++H L ++DAI+L M +G P+ V+Y L+ LCK R+LDEA +
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ P I+ Y +D + R G E L ++ G P TY ++I +
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K++ E+ G P+ +Y + N + Q EM + + T +L
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVL 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 167/399 (41%), Gaps = 39/399 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
G+ + ++T+I L K L D+M G P++VT TL+
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192
Query: 108 --------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+I C V +A N F + I + L+ A
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 252
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC + L+ N + P N F+ +++ C G EA V M +RG+
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKIMP-NVVIFSTVVDALCK-EGKVMEAHDVVDMMIKRGVE 310
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+VV+++ ++ + + + +++FD M G D Y+ +I+ K + ++ A+ L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
+ M K + PN VTY++L+ LC +L +A F EM+ RG P +Y LD +
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R +E LL+++ P Y ++I R + +++ +S G P+ +
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
YT +I+ L G L EA + + EMK K P T L+
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ T++ L K K A ++D M RG E P++VT L+ +C ++ A+
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVE--PNVVTYNALM---DGHCLRSEMDEAVKV 335
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F FA + + L++ C+ + ++ A +L C K++ P NT +++ +++G C
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYSTLMHGLC 394
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
++ G ++A ++ EM RG D VS+ ++ K R L + + L ++ ++ D
Sbjct: 395 HV-GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453
Query: 244 KVYNAVI-----------------------------------HALAKGRLVKDAISLMKS 268
++Y VI + L + L+ +A L
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
M+ KG +PN TYN + + + + Q EML RG S + T ++++
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+A Y T+I K+++ + A L +EM E P+ VT TL+ C V
Sbjct: 343 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM---HGLC---HV 396
Query: 120 GRAINAFYAYKRFKFAVGIEDFQG---LLSALCRYKNVQDAEHLMFC--NKDVFPFNTKS 174
GR +A + I DF LL LC+ + + +A L+ ++ P + +
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP-DIQI 455
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I+++G C G A ++ +S +G+ +V +++ +I+ + L + +LF +M
Sbjct: 456 YTIVIDGMCRA-GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
KR G + YN + + I L++ M +G + +V T L++ L
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 574
Query: 295 DEARQAFDEMLQ 306
+Q E LQ
Sbjct: 575 QSVKQILSEFLQ 586
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
+ DA+S M P++ + L+ + K + +M GI P I T
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++F + R G F +L + K+G QP T+ LI+ + G V +++++
Sbjct: 109 LINSFCHLQRLG-FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE-----PKTDELLQDWSYNKQ 429
G P+ +Y LI+ L G A + M++ P+ D L +D +
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227
Query: 430 F 430
F
Sbjct: 228 F 228
>gi|356506754|ref|XP_003522141.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 258
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 26/279 (9%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
K +N+ILNGWC ++G+S +A+RVW ++ D+ +++ I +K
Sbjct: 2 KMWNVILNGWC-VLGNSHKAKRVWRDIVASPCKPDIFTYATFIKALTK------------ 48
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
G + D + N +I AL + + +A+ + M E+G PNV TYN LIK +C +
Sbjct: 49 -----GGKPDVVICNCIIDALCFKKRIPEALKIFCDMSERGCEPNVATYNFLIKYMCNIQ 103
Query: 293 KLDEARQAFDEMLQRGIS--PTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
++++ + DEM ++ S P TY L ++ +V +LE M + GC D Y M
Sbjct: 104 RMEKVYELVDEMERKKGSCLPNAVTYCYLLKSLKESGKVCRVLERMERNGCGMNGDVYNM 163
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ + +W V K W E+ NG GP+R SYT +IH F G++++A +Y EM K
Sbjct: 164 VLSLYMKWDDGDGVRKTWEEMERNGWGPNRRSYTIMIHENFEKGRVKDAVRYLEEMISKG 223
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNT 449
++ EP+TD+L+ S N + R K H+ G T
Sbjct: 224 MVLEPRTDKLVS--SMNIRLKGRT----KKHEDVEGGRT 256
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 166/365 (45%), Gaps = 54/365 (14%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E P+L T ILI C + A + F V F LL LC K
Sbjct: 86 EVTPNLCTYG---ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 142
Query: 155 QDAEHLMF-------CNKDVFPFNTKSFNIILNGWCN----------------------- 184
DA ++ C +VF S+NI+L G C+
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVF-----SYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 185 -------II------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+I G +A + EM RGI +VV+++ II+ KA+ + K + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVL 257
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M + G+ + + YN+++H K+AI +K M GV P+VVTYNSL+ LCK
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+ EAR+ FD M +RG+ P I TY L T E+ GLL+ M + G P + +
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI +++ + V++++ + G PD +Y +I L +G++E+A +Y+ +M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437
Query: 409 KQLLP 413
++L P
Sbjct: 438 ERLSP 442
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 19/327 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI-- 436
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++ C I +A+ + +EM RGIC D + F+ II + K
Sbjct: 437 DERLSPGNI-VYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ + Y+ +I + +A L+ SM G+ P+ VTYN+
Sbjct: 495 VIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTG---EEVFGLLESM 336
LI CK ++++A F EM G+SP I TY+ L + RT E G+ ES
Sbjct: 555 LINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES- 613
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G Q TY +++ + +++ + + ++ +I AL G+
Sbjct: 614 ---GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQD 423
+EA + + L+P+ +T L+ +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE 697
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 160/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K D A + +MR P VT T++ ++ + V D A+ F
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED---AMRYFE 433
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ + G + L+ +LC + A+ L+ D +T FN I++ C
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE- 492
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ +++++S +I Y A + + +L M +G++ D Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++DA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + +E + +++ Q T+ ++I + +
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ +S NG PD +Y+ + L G LEE ++ M+E
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A+ EM P++VT ++ I C + +A+
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSI---IAALCKAQAMDKAMEVLT 258
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + + ++ C + Q E + F K DV +N+ +
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYC--SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 317 NGRCT------EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ +I A AK V A+ + M ++G+ P+ VTY ++I LCK+ ++++A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 300 AFDEMLQRGISPTIRTYHAF-----------------LDIIRTG---EEVF--------- 330
F++M+ +SP Y++ L+++ G + +F
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 331 ---------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
L + M ++G +P TY LI + + K+ + G PD
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y LI+ ++E+A + EM+ + P+
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--CYSK--ARNLHKVLRLFDQ 233
IL G C G + ++G D ++F+ ++ C K + + VLR +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR---R 152
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKA 291
M ++G + YN ++ L ++A+ L++ M + G P+VV+Y ++I K
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
LD+A + EML RGI P + TY++ + + + ++ +L SM K G P TY
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ + Q ++ +G PD +Y +L+ L NG+ EA + + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 409 KQLLPEPKT-DELLQDWSYNKQFVE 432
+ L PE T LLQ ++ VE
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVE 357
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V PN+ TY LI
Sbjct: 41 VFDELLRRGRGASIYGLNCALADVARHSPAA-AVSRYNRMARAGADEVTPNLCTYGILIG 99
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAH 400
P +Y +L+K + ++ + ++G PD SYT +I+ F G L++A+
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 401 QYYMEMKEKQLLPEPKT 417
Y EM ++ +LP T
Sbjct: 220 GTYHEMLDRGILPNVVT 236
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P+++T TL I YC + A + + L++ C+ ++DA
Sbjct: 512 PNIITYSTL---IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P + ++NIIL G ++ A+ +++ +++ G ++ +++ I+
Sbjct: 569 LVLFREMESSGVSP-DIITYNIILQGLFQTRRTA-AAKELYVGITESGTQLELSTYNIIL 626
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K +A L ++ G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G + R ++ + DI R G
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746
Query: 329 VF 330
+F
Sbjct: 747 LF 748
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 9/263 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D A L+ M P VT TL I YC + + A+ F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL---INGYCKISRMEDALVLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWC--N 184
+ + I + +L L + + A+ L + + ++NIIL+G C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + EA R++ + + + +F+ +I K + LF + G+ D +
Sbjct: 634 L---TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ + L + L+++ L SMEE G N NS+++ L + + A +
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 305 LQRGISPTIRTYHAFLDIIRTGE 327
++ S T FLD++ G+
Sbjct: 751 DEKHFSLEASTASLFLDLLSGGK 773
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 177/367 (48%), Gaps = 16/367 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G S + ++ K + + + IDEM P T +L + C +
Sbjct: 275 AGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSL---VNGLCRIGH 331
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V A+ + F I + L+ LC+ V++A ++ +D P NT ++N
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSP-NTVTYN 390
Query: 177 IILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+++ C N + + E RV ++ +GI DV +F+ +I N + LF++M
Sbjct: 391 TLISTLCKENQVEEATELARV---LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447
Query: 235 KRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
K G D YN +I +L ++GRL ++A+SL+K ME G + NVVTYN+LI CK ++
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRL-EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA + FDEM +GIS + TY+ +D + R EE L++ M G +P TY
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ F R + ++ NG PD +Y LI L G++E A + ++ K
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 411 LLPEPKT 417
++ P+T
Sbjct: 627 MVLAPQT 633
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 181/406 (44%), Gaps = 50/406 (12%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F+ G+ +++++ L ++ A ++D M P + T +L+ +
Sbjct: 303 FIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGL- 361
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
C + +V A+ F+ + L+S LC+ V++A L + +K + P
Sbjct: 362 --CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 419
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +FN ++ G C + + R A ++ EM +G D +++ +I L + L
Sbjct: 420 -DVCTFNSLIQGLC-LTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 230 LFDQMKRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +M+ G C R V YN +I K + +++A + ME +G++ NVVTYN+LI
Sbjct: 478 LLKEMESSG--CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPT 344
LCK R+++EA Q D+ML G+ P TY++ L R G+ + ++++M GC+P
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595
Query: 345 NDTYIMLI-----------------------------------KKFSRWRQFGNVFKVWN 369
+ TY LI K R ++ +++
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655
Query: 370 EISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMKEKQLLPE 414
E+ E G+ PD +Y + L G + EA + +EM +K LP+
Sbjct: 656 EMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 178/407 (43%), Gaps = 46/407 (11%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
++D ++ WA KQ + S+ Y ++ LGK F + ++ EM+ TG +
Sbjct: 82 QSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMK--HTGCE-I 138
Query: 102 TKQTLLILIRRYC---------AVHDV-----GRAINAF-YAYKRFKFAVG--------- 137
+ T LILI Y AV D+ G ++AF Y + G
Sbjct: 139 RRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIV 198
Query: 138 ------------IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ F L+ ALCR ++ A +M + + P + K+F ++ G+
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSP-DEKTFTTLMQGFI 257
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G+ A R+ +M G V+ + ++ Y K + +VL D+M G DR
Sbjct: 258 EE-GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDR 316
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N++++ L + VK A+ ++ M ++G P++ TYNSLI LCK +++EA + ++
Sbjct: 317 FTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQ 376
Query: 304 MLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M+ R SP TY+ + + EE L + G P T+ LI+
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNN 436
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+++ E+ G PD +Y LI +L G+LEEA EM+
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 53/338 (15%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R E A + L + SG + + Y+T+I K ++ + A + DEM ++V
Sbjct: 469 RGRLEEALSL-LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T L+ LC+ + V++A LM
Sbjct: 528 TYNT--------------------------------------LIDGLCKNRRVEEAAQLM 549
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ + P + ++N +L +C G ++A + M+ G D V++ +I S
Sbjct: 550 DQMLMEGLKP-DKFTYNSLLTYFCR-AGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA + RL ++ G+ + YN VI AL + + +A+ L + M EKG P+ V
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667
Query: 280 TYNSLIKPLCK-ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESM-- 336
TY + + LC + EA EM +G P + +FL ++ G + +++
Sbjct: 668 TYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLP---DFSSFL-MLAEGLCALSMEDTLIK 723
Query: 337 ---RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
R M +D+ + +I F + R+F + I
Sbjct: 724 LVNRVMKQANFSDSEVSMIMGFLKIRKFQDALATLGRI 761
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 174/354 (49%), Gaps = 9/354 (2%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A Y T+I+ K+ + + A + DEM GE PS
Sbjct: 160 RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSA 219
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V L I YC V + A+ + A+ + + L+ AL DA +
Sbjct: 220 VMYNAL---IGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAV 276
Query: 161 MF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ K+ F + ++NI++NG+C G+ ++A V+ EMSQ+G+ V+++ +I +S
Sbjct: 277 LEEMQKNGFSPDVFTYNILINGYCKE-GNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
+ + + RLF+ + GI D +YNA+I++ G ++ A +M ME+K + P+ +
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDM 395
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESM 336
TYN+L++ C +LDEAR DEM +RGI P + +Y+ + ++ L + M
Sbjct: 396 TYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
G PT TY LI+ + RQ + + E+ G PD S+Y +LI L
Sbjct: 456 MDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 143/317 (45%), Gaps = 13/317 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
T I++R CA RA+ R + +++ C VQ A +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRPNAVT----YNTVIAGFCARGRVQAALEVMREM 173
Query: 165 KD---VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSK 220
++ + P + ++ +++GWC I G +A +V+ EM +G + V ++ +I Y
Sbjct: 174 RERGGIAP-DKYTYATLISGWCKI-GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
L L+ + M + GI YN ++HAL DA ++++ M++ G +P+V T
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMR 337
YN LI CK +A + F+EM Q+G+ T TY + + + R G+ E L
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K G +P Y LI +++ E+ + PD +Y L+ L G+L+
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411
Query: 398 EAHQYYMEMKEKQLLPE 414
EA EM ++ + P+
Sbjct: 412 EARTLIDEMTKRGIQPD 428
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G A + Y+ ++ L + A+A+++EM+ P + T ILI YC
Sbjct: 247 QRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN---ILINGYCKEG 303
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
+ +A+ F + + L+ R VQ+ + L + K + P + +
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP-DVVMY 362
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N C G A + EM ++ I D ++++ ++ + L + L D+M
Sbjct: 363 NALINSHCTG-GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ GI+ D YN +I + +KDA+ + M +KG P ++TYN+LI+ LCK R+ D
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD 481
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM+ +GI+P TY + ++ + T +E
Sbjct: 482 DAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 18/326 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK-RFKFAVGIEDFQGLLSALCRYKNVQD 156
P+ VT T+ I +CA V A+ + R A + L+S C+ ++D
Sbjct: 145 PNAVTYNTV---IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMED 201
Query: 157 AEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
A + M +V P + +N ++ G+C++ G A + +M QRGI V +++
Sbjct: 202 AVKVFDEMLTKGEVAP-SAVMYNALIGGYCDV-GKLDVALQYREDMVQRGIAMTVATYNL 259
Query: 214 IISCY---SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ ++A + + VL ++M++ G D YN +I+ K K A+ + + M
Sbjct: 260 LMHALFMDARASDAYAVL---EEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+KGV VTY SLI + ++ E + F+ +++GI P + Y+A ++ TG E
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ ++ M K P + TY L++ F + + +E+++ G PD SY LI
Sbjct: 377 RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI 436
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G +++A + EM +K P
Sbjct: 437 SGYSMKGDIKDALRVRDEMMDKGFNP 462
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 19/319 (5%)
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI--ILNGWCNIIGSSREAERVWMEMSQRG 203
+AL +K+ A+ + C V P + S ++ +L + R++ ++
Sbjct: 22 AALALFKSALSADRAL-CPLSVLPHLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLS 80
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI-HALAKGRLVKDA 262
+ V S ++S A LF + R+ + +N ++ H A G+ V+ A
Sbjct: 81 VPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVR-A 135
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLD 321
+ L++ M PN VTYN++I C ++ A + EM +RG I+P TY +
Sbjct: 136 LELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLIS 191
Query: 322 ----IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
I R + V E + K P+ Y LI + + + ++ + G
Sbjct: 192 GWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIA 251
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
++Y L+HALF++ + +A+ EM++ P+ T +L + Y K+ E++
Sbjct: 252 MTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN-GYCKEGNEKKALE 310
Query: 438 LKAHQPQSGQNTRVISKKS 456
+ Q G ++ S
Sbjct: 311 VFEEMSQKGVRATAVTYTS 329
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 190/423 (44%), Gaps = 29/423 (6%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHST 65
LRE S +R K I ++L+ ++ WV WE + G +
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE-----IYGEVVRGGIELNV 257
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ M+ L K RKF+ + +M G +VT TL I YC V A
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTL---INAYCREGLVEEAFQL 314
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
++ G+ + +L LC+ A+ ++ + P N ++N +L C
Sbjct: 315 LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP-NAATYNTLLVEIC 373
Query: 184 ---NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
NI+ EA+ ++ EMS+RG+ D+VSFS +I ++ +L++ L F +M+R GI
Sbjct: 374 RRDNIL----EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +Y +I + + DA+ + M +G +VVTYN+ + LCK + +A
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 301 FDEMLQRGISPTIRTYHAFLDIIR------TGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F+EM++RG+ P ++ F +IR ++ L E+M + +P TY LI
Sbjct: 490 FNEMVERGMVP---DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + + G ++W+++ PD SY +++ +G L EA +M EK + P
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606
Query: 415 PKT 417
T
Sbjct: 607 LVT 609
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 182/403 (45%), Gaps = 53/403 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T++ + + A + DEM P LV+ +L+ ++ R ++
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MF---CNKDVFPFN 171
+A+ F +R + L+ CR + DA + M C DV +N
Sbjct: 415 ---QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T LNG C +A+ ++ EM +RG+ D +F+ +I Y K N+ K L LF
Sbjct: 472 T-----FLNGLCKK-KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 232 DQMKRMGIECDRKVYNAVIHALAK----GR------------------------------ 257
+ M R ++ D+ YN +I K GR
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 258 -LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
L+ +A++L M EKG+ PN+VT N+LIK C++ + +A + +M+ GI P +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 317 HAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ +D ++ E+ F L+ M K G Q TY +++ F + +V ++ E
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
G PD ++Y++LI+ ++EA +++ EM ++ L+P+ +
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 177/445 (39%), Gaps = 61/445 (13%)
Query: 36 EVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG 94
+VL R D F L + + HS+ M+ L + R+ A A I M
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 95 ETGPSLVTKQTLL--------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
+ ++L+ +L+R Y + AF +R +V I
Sbjct: 165 SGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINA 224
Query: 141 FQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM-- 197
LL L R V A E + N + NI++N C R+ E V
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC----KDRKFENVMFFL 280
Query: 198 -EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M +G+ D+V+++ +I+ Y + + + +L + G+E YNA+++ L K
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
A ++ M + G+ PN TYN+L+ +C+ + EA++ FDEM +RG+ P + ++
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 317 HAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSR---------------- 357
+ + ++ ++ L R+M G P N Y +LI F R
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 358 -------------------WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+ F + ++NE+ E G PD ++T LI +G +++
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M L P+ T L D
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLID 545
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 179/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LVS+V+ +R + + AF FF WA +Q Y H Y+ +I L K
Sbjct: 96 LDALGAELTTPLVSDVMHRLRYEEKLAFRFFAWASQQDNYEHDQAAYNEVIDTLSGTRYK 155
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ T V + LL ++R Y H A R +
Sbjct: 156 ARQFGVLCDVLDHMKRHRTRS--VPVEDLLAILRAYTEKHLTNLRKLAKKRRVRMRTPPE 213
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N +++NI+ GWC ++A +V
Sbjct: 214 TDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRA-RDPKKAMKVLE 272
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM + ++ I + A + + LF+ M+ G K Y+ +I AL
Sbjct: 273 EMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIVALV 332
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + D L+ M + G P+V T+ LI+ +C K+D A +EM + G P I
Sbjct: 333 KADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFPPDIV 392
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL++ ++ ++ L E M + C+P+ TY ML+ F + R+ +W E+
Sbjct: 393 TYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWLEM 452
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G +Y +I LF G+ E+A
Sbjct: 453 DKRGCRRAVDTYEIMIDGLFDCGRTEDA 480
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ +F ++ G C ++ A V EM + G D+V+++C + + L+L
Sbjct: 355 DVSTFKDLIEGMC-LVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALKL 413
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M E YN ++ + R A+ + M+++G V TY +I L
Sbjct: 414 CERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDTYEIMIDGLFD 473
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRK 338
+ ++A DE++ + + + + A L + + L E MRK
Sbjct: 474 CGRTEDATNLLDEVINHDMKLSYKKFDAIMLQLSAVGNLGAIHRLSEHMRK 524
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 17/358 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A + Y T+I+ KV + D A + DEM GE P
Sbjct: 527 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 586
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDA 157
V L I YC D G+ A R A+ + + L+ AL +A
Sbjct: 587 VMYNAL---IGGYC---DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 640
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ K + P + ++NI++NG C G+ ++A ++ MS+RG+ VV+++ +I
Sbjct: 641 YELVEEMGGKGLAP-DVFTYNILINGHCKE-GNVKKALEIFENMSRRGVRATVVTYTALI 698
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
SK + + +LFD+ R GI D +YNA+I++ + + A +M ME+K +A
Sbjct: 699 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL-- 333
P+ VTYN+L++ LC ++DEAR+ DEM +RGI P + TY+ + +V L
Sbjct: 759 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 818
Query: 334 -ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M G PT TY LI+ + Q + + E+ ENG PD S+Y +LI L
Sbjct: 819 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y+ ++ L + A+ L++EM G P + T ILI +C
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN---ILINGHCKEG 670
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A+ F R + + L+ AL + VQ+ + L + + P + +
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP-DLVLY 729
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N + G+ A + EM ++ I D V+++ ++ + + +L D+M
Sbjct: 730 NALINSH-STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 788
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI+ D YN +I + VKDA+ + M KG P ++TYN+LI+ LCK + D
Sbjct: 789 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 848
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM++ GI+P TY + ++ + T +E
Sbjct: 849 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T S + +L+ S A ++ +M + + +F+ ++ A +
Sbjct: 448 LPISTASLHPLLSAL-----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA 502
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIK 286
L L QM R + YN VI V+ A+ +M+ M E+G +APN TY ++I
Sbjct: 503 LELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 558
Query: 287 PLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
CK ++DEA + FDEML +G + P Y+A
Sbjct: 559 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA--------------------------- 591
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
LI + + + + E G ++Y L+HALF++G+ EA++ E
Sbjct: 592 -----LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 646
Query: 406 MKEKQLLPE 414
M K L P+
Sbjct: 647 MGGKGLAPD 655
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 17/358 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A + Y T+I+ KV + D A + DEM GE P
Sbjct: 532 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 591
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDA 157
V L I YC D G+ A R A+ + + L+ AL +A
Sbjct: 592 VMYNAL---IGGYC---DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 645
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ K + P + ++NI++NG C G+ ++A ++ MS+RG+ VV+++ +I
Sbjct: 646 YELVEEMGGKGLAP-DVFTYNILINGHCKE-GNVKKALEIFENMSRRGVRATVVTYTALI 703
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
SK + + +LFD+ R GI D +YNA+I++ + + A +M ME+K +A
Sbjct: 704 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL-- 333
P+ VTYN+L++ LC ++DEAR+ DEM +RGI P + TY+ + +V L
Sbjct: 764 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 823
Query: 334 -ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M G PT TY LI+ + Q + + E+ ENG PD S+Y +LI L
Sbjct: 824 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y+ ++ L + A+ L++EM G P + T ILI +C
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN---ILINGHCKEG 675
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A+ F R + + L+ AL + VQ+ + L + + P + +
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP-DLVLY 734
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N + G+ A + EM ++ I D V+++ ++ + + +L D+M
Sbjct: 735 NALINSH-STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 793
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI+ D YN +I + VKDA+ + M KG P ++TYN+LI+ LCK + D
Sbjct: 794 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 853
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM++ GI+P TY + ++ + T +E
Sbjct: 854 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T S + +L+ S A ++ +M + + +F+ ++ A +
Sbjct: 453 LPISTASLHPLLSAL-----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA 507
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIK 286
L L QM R + YN VI V+ A+ +M+ M E+G +APN TY ++I
Sbjct: 508 LELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 563
Query: 287 PLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
CK ++DEA + FDEML +G + P Y+A
Sbjct: 564 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA--------------------------- 596
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
LI + + + + E G ++Y L+HALF++G+ EA++ E
Sbjct: 597 -----LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 651
Query: 406 MKEKQLLPE 414
M K L P+
Sbjct: 652 MGGKGLAPD 660
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ M+ K +FD A +I EM P +VT +LI DV AI +
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHN---VLIDARFRAGDVDAAIALVDS 217
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD---VFPFNTKSFNIILNGWCNI 185
GI F +L LC+++ A+ + F D V P + +SFNI++ G+C +
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV-FRAMDQCSVAP-DVRSFNILIGGFCRV 275
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA + + EM QRG+ DVVSFSC+I +S + +MK +G+ D +
Sbjct: 276 -GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI + + +A+ + M G P+VVTYN+L+ LCK +L +A + +EM
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+RG++P + T+ + R G E+ L +++ +P Y LI R
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++W+++ P+ +Y+ LI + G++EEA + EM K LP T
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMT 509
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 166/365 (45%), Gaps = 10/365 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + +I + K D A A + EM+G P V ++I +C
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT---MVIGGFCRA 345
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A+ + + LL+ LC+ + DAE L+ + V P + +
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP-DLCT 404
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F +++G+C G+ +A +++ + + + DVV+++ +I + +L K L+D M
Sbjct: 405 FTTLIHGYCRD-GNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
I + Y+ +I + + V++A + M KG PN++TYNS+IK C++ +
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIML 351
+ +Q +M+Q I P + T++ + E + F + M K QP TY M+
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I FS +V+ ++ +G PDR +Y +LI+ G +EA Q + EM +
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGF 643
Query: 412 LPEPK 416
P+ K
Sbjct: 644 APDDK 648
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 44/272 (16%)
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
GW ++ + EA R+ + Y + + ++ Y K+ K + +M++ +
Sbjct: 136 GWPHL---AEEAYRLVLSSDSEVNAY---TLNIMVHSYCKSLEFDKADTVISEMEKRCVF 189
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +N +I A + V AI+L+ SM KG+ P +VT+NS++K LCK R+ D+A++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 301 F-----------------------------------DEMLQRGISPTIRTYHAFLDIIRT 325
F EM QRG++P + ++ + + T
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309
Query: 326 ---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ L M+ +G P Y M+I F R +V +E+ G PD +
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y L++ L +L +A + EMKE+ + P+
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 181/383 (47%), Gaps = 13/383 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST +++ ++ + K +++ T ++L ++M P + TL ILI +C ++ +G A
Sbjct: 68 STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV---YTLNILINSFCHLNRLGFAF 124
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ LC + DA HL +K + F N ++ ++N
Sbjct: 125 SVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLF--DKMIGEGFQPNVVTYGTLIN 182
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q DVV ++ II K R + + LF +M GI
Sbjct: 183 GLCKV-GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 241
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D Y ++IH+L K +L+ M + P+VV +++++ LCK K+ EA
Sbjct: 242 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 301
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D M+ RG+ P + TY+A +D + +E + ++M G P +Y LI + +
Sbjct: 302 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 361
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ E+ + P+ +Y L+H + G+L++A + EM +P+ T
Sbjct: 362 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHV-GRLQDAIALFHEMVAHGQIPDLAT 420
Query: 418 DELLQDWSYNKQFVERQIASLKA 440
+L D+ K ++ +A LK
Sbjct: 421 YRILLDYLCKKSHLDEAMALLKT 443
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 17/362 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L +M G P + T +L+ + C V +N
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ + +A + M + V P N ++N +++G C +
Sbjct: 272 NSKIMPDVV---IFSTVVDALCKEGKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHC-L 326
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M G +V+S++ +I+ Y K + + K LF++M + + +
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN ++H GRL +DAI+L M G P++ TY L+ LCK LDEA +
Sbjct: 387 YNTLMHXCHVGRL-QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 306 QRGISPTIRTYHAFLD-IIRTGE-----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+ P I+ Y +D + R GE ++F L S G +P TY ++I R
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK---GLRPNVRTYTIMINGLCRRG 502
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
K++ E+ NG PD +Y + L N + A Q EM + + T
Sbjct: 503 LLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTT 562
Query: 420 LL 421
LL
Sbjct: 563 LL 564
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 17/366 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T + T+I L K A L D+M G P++VT T LI C V +
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT---LINGLCKVGNT 190
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTK 173
AI + ++ + + ++ +LC+ + V +A +L + D+F + +
Sbjct: 191 NAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS- 249
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+++ CN+ + + +M I DVV FS ++ K + + + D
Sbjct: 250 ----LIHSLCNLC-EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 304
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+E + YNA++ + +A+ + +M G APNV++YN+LI CK ++
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+D+A F+EM Q+ + P TY+ + G ++ L M G P TY +L
Sbjct: 365 MDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 424
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + + I + PD YT +I + G+LE A + + K L
Sbjct: 425 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 484
Query: 412 LPEPKT 417
P +T
Sbjct: 485 RPNVRT 490
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 14/377 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I L KV + A L+ M G P +V ++ I C V
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI---IDSLCKDRQV 225
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGL---LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
A N F + I + L L LC +K+V + M N + P + F+
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI-NSKIMP-DVVIFS 283
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G EA V M RG+ +VV+++ ++ + + + +++FD M
Sbjct: 284 TVVDALCKE-GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + YN +I+ K + + A L + M +K + PN VTYN+L+ C +L +
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQD 401
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A F EM+ G P + TY LD + +E LL+++ P Y ++I
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + +++ +S G P+ +YT +I+ L G L+EA++ +MEM P
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 521
Query: 414 EPKT-DELLQDWSYNKQ 429
+ T + + Q NK+
Sbjct: 522 DGCTYNTITQGLLQNKE 538
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+GYA + Y+T+I K+++ D A L +EM E P+ VT TL+ C V
Sbjct: 342 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM----HXCHVG 397
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ AI F+ + ++ LL LC+ ++ +A L+ ++ P + + +
Sbjct: 398 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP-DIQIY 456
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I+++G C G A ++ +S +G+ +V +++ +I+ + L + +LF +M
Sbjct: 457 TIVIDGMCRA-GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D YN + L + + AI L++ M +G + +V T L++ LC +
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQ 575
Query: 296 EARQAFDEMLQ 306
+Q E +Q
Sbjct: 576 SVKQILSEFVQ 586
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 41/214 (19%)
Query: 218 YSKARN---LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+SK+ N L L F++M M +N ++ ++AK + SL M+ G+
Sbjct: 41 HSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGI 100
Query: 275 APNVVTYN-----------------------------------SLIKPLCKARKLDEARQ 299
P+V T N +LI+ LC K+ +A
Sbjct: 101 PPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALH 160
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFS 356
FD+M+ G P + TY ++ + + G LL SM + CQP Y +I
Sbjct: 161 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 220
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ RQ F +++++ G PD +YT+LIH+L
Sbjct: 221 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 254
>gi|242084014|ref|XP_002442432.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
gi|241943125|gb|EES16270.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
Length = 535
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 18/398 (4%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWE----AAFTFFLWAGKQSGYAHSTREYHT 70
R+ + + GI + L +VL+ V N + A TFF WA S S +
Sbjct: 81 RTALHQALSSTGIGAAMALSPDVLANVVNAGDLSGAATVTFFDWAVTNSKPPPSVHTCNI 140
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + FD + MR P L T L I+I A V RA+ +
Sbjct: 141 VIRALGRKKFFDFLDDALQIMRRNNIFPDLTT---LEIIIDSLVAARHVSRAVEVL-STD 196
Query: 131 RFKFAVGI-----EDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCN 184
+F F +G E F L+ LCR +V A L+ K++ + +N ++ GW
Sbjct: 197 QFGFGIGKACHKKEAFTVLIRCLCRRSHVGLASSLLQAARKELLGLDCNVYNDVMGGWAR 256
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
GS + + VW +M + G+ + VS +I +A LR F+ M
Sbjct: 257 F-GSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRAGQTEDALREFENMVHERYGPTTM 315
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA+I + I K M EK PN+ TY+ ++K K R++ +A Q FD+M
Sbjct: 316 AYNALIFNFISVGDLDSCIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDM 375
Query: 305 LQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
L +G+ P +F++ + T G L+ + RK GC + Y +L+++ +++ +
Sbjct: 376 LVQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKS 435
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G V +W E+ E G PD+ Y +++ L GK++ A
Sbjct: 436 GIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAA 473
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 154 VQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI---CYDVVS 210
+ DA +M N ++FP + + II++ SR E + + GI C+ +
Sbjct: 154 LDDALQIMRRN-NIFP-DLTTLEIIIDSLVAARHVSRAVEVLSTDQFGFGIGKACHKKEA 211
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKR--MGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
F+ +I C + ++ L ++ +G++C+ VYN V+ A+ V +
Sbjct: 212 FTVLIRCLCRRSHVGLASSLLQAARKELLGLDCN--VYNDVMGGWARFGSVDKLQEVWTK 269
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M+E G+ PN V++ LI+ L +A + ++A + F+ M+ PT Y+A + + I G+
Sbjct: 270 MQEDGLVPNEVSHCHLIEGLGRAGQTEDALREFENMVHERYGPTTMAYNALIFNFISVGD 329
Query: 328 --EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ M + C P DTY ++K F + R+ + ++++++ G P+ T+
Sbjct: 330 LDSCIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDMLVQGVLPNTGMITS 389
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I+ L G A Y + ++ + K +LL
Sbjct: 390 FINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLL 425
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 102/250 (40%), Gaps = 7/250 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + + +I LG+ + + A + M GP+ + L I + +V
Sbjct: 271 QEDGLVPNEVSHCHLIEGLGRAGQTEDALREFENMVHERYGPTTMAYNAL---IFNFISV 327
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ I + I+ + ++ A + + V DA + + V P NT
Sbjct: 328 GDLDSCIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDMLVQGVLP-NTGM 386
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N C G A ++ + + G + ++ ++ +K VL ++++M
Sbjct: 387 ITSFINPLCTF-GPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEM 445
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + D+++Y +++ L V A+S+++ G V Y+ L L + K+
Sbjct: 446 QECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKV 505
Query: 295 DEARQAFDEM 304
+ A F ++
Sbjct: 506 ETAYNLFKKV 515
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 17/358 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A + Y T+I+ KV + D A + DEM GE P
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 217
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDA 157
V L I YC D G+ A R A+ + + L+ AL +A
Sbjct: 218 VMYNAL---IGGYC---DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 271
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ K + P + ++NI++NG C G+ ++A ++ MS+RG+ VV+++ +I
Sbjct: 272 YELVEEMGGKGLAP-DVFTYNILINGHCKE-GNVKKALEIFENMSRRGVRATVVTYTALI 329
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
SK + + +LFD+ R GI D +YNA+I++ + + A +M ME+K +A
Sbjct: 330 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL-- 333
P+ VTYN+L++ LC ++DEAR+ DEM +RGI P + TY+ + +V L
Sbjct: 390 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 449
Query: 334 -ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M G PT TY LI+ + Q + + E+ ENG PD S+Y +LI L
Sbjct: 450 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y+ ++ L + A+ L++EM G P + T ILI +C
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN---ILINGHCKEG 301
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A+ F R + + L+ AL + VQ+ + L + + P + +
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP-DLVLY 360
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N + G+ A + EM ++ I D V+++ ++ + + +L D+M
Sbjct: 361 NALINSH-STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 419
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI+ D YN +I + VKDA+ + M KG P ++TYN+LI+ LCK + D
Sbjct: 420 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 479
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM++ GI+P TY + ++ + T +E
Sbjct: 480 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 45/250 (18%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T S + +L+ S A ++ +M + + +F+ ++ A +
Sbjct: 79 LPISTASLHPLLSAL-----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA 133
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLI 285
L L QM R + YN VI ++GR V+ A+ +M+ M E+G +APN TY ++I
Sbjct: 134 LELLRQMPR----PNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAPNQYTYGTVI 188
Query: 286 KPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPT 344
CK ++DEA + FDEML +G + P Y+A
Sbjct: 189 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA-------------------------- 222
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
LI + + + + E G ++Y L+HALF++G+ EA++
Sbjct: 223 ------LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276
Query: 405 EMKEKQLLPE 414
EM K L P+
Sbjct: 277 EMGGKGLAPD 286
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 181/388 (46%), Gaps = 18/388 (4%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
+ A TFF Y MI +L K F A L+DEMR V+ Q
Sbjct: 119 FPEALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIP---VSSQ 175
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIED---FQGLLSALCRYKNVQDAEHL 160
+L +IRRY G + A ++R + + G+ D LL AL + + +A+ L
Sbjct: 176 VILAIIRRYV---RAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQAL 232
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
K VFP + + +++ WC G +AE+V+ EM Q GI +V +++ +I +
Sbjct: 233 FDSYKSVFPPDVVLYTTLVHAWCRA-GCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYR 291
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + + L QM G + +NA++ A K + + + M + G P+++T
Sbjct: 292 AGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIIT 351
Query: 281 YNSLIKPLCKA--RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR-TG--EEVFGLLES 335
YN L++ C LD A + +M+ +G P T++ L ++ TG E L E
Sbjct: 352 YNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYER 411
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M+++ C+P TY +L+K F++ + V ++ ++ G P+ ++Y ALI + G
Sbjct: 412 MQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGN 471
Query: 396 LEEAHQYYMEM-KEKQLLP-EPKTDELL 421
AH EM +EK L P +P D +L
Sbjct: 472 WRRAHATLREMVEEKSLKPTKPVYDMVL 499
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D FN ++L G+ A R++ M + +VV+++ ++ ++K +
Sbjct: 382 CIPDCHTFNPM-LKLVLG-----TGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEK 435
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTY 281
++ VLR+ M G+E + Y A+I + +G + +L + +EEK + P Y
Sbjct: 436 SMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVY 495
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG 308
+ ++ L KA +L + + + M RG
Sbjct: 496 DMVLMLLRKAGQLRKHEELVELMADRG 522
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
Y ++I L K AR DEM +R I + + A + +R G E L M
Sbjct: 142 YAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRME 201
Query: 338 KMGCQ-PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ G P L+ S+ R G +++ ++ PD YT L+HA G L
Sbjct: 202 EYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSY-KSVFPPDVVLYTTLVHAWCRAGCL 260
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
++A Q + EM++ ++P T + D Y V R
Sbjct: 261 DKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPR 297
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 17/358 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A + Y T+I+ KV + D A + DEM GE P
Sbjct: 85 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 144
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDA 157
V L I YC D G+ A R A+ + + L+ AL +A
Sbjct: 145 VMYNAL---IGGYC---DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ K + P + ++NI++NG C G+ ++A ++ MS+RG+ VV+++ +I
Sbjct: 199 YELVEEMGGKGLAP-DVFTYNILINGHCKE-GNVKKALEIFENMSRRGVRATVVTYTSLI 256
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
SK + + +LFD+ R GI D +YNA+I++ + + A +M ME+K +A
Sbjct: 257 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL-- 333
P+ VTYN+L++ LC ++DEAR+ DEM +RGI P + TY+ + +V L
Sbjct: 317 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 376
Query: 334 -ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M G PT TY LI+ + Q + + E+ ENG PD S+Y +LI L
Sbjct: 377 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y+ ++ L + A+ L++EM G P + T ILI +C
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN---ILINGHCKEG 228
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A+ F R + + L+ AL + VQ+ + L + + P + +
Sbjct: 229 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP-DLVLY 287
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N + G+ A + EM ++ I D V+++ ++ + + +L D+M
Sbjct: 288 NALINSH-STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 346
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ GI+ D YN +I + VKDA+ + M KG P ++TYN+LI+ LCK + D
Sbjct: 347 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 406
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM++ GI+P TY + ++ + T +E
Sbjct: 407 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T S + +L+ S A ++ +M + + +F+ ++ A +
Sbjct: 6 LPISTASLHPLLSAL-----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA 60
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIK 286
L L QM R + YN VI V+ A+ +M+ M E+G +APN TY ++I
Sbjct: 61 LELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 116
Query: 287 PLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
CK ++DEA + FDEML +G + P Y+A
Sbjct: 117 GWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA--------------------------- 149
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
LI + + + + E G ++Y L+HALF++G+ EA++ E
Sbjct: 150 -----LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 204
Query: 406 MKEKQLLPE 414
M K L P+
Sbjct: 205 MGGKGLAPD 213
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 14/401 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA TF KQ ST +++ ++ + K + T +L +M P + T
Sbjct: 53 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV---YT 107
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L I+I C ++ V A +A + F L+ LC + +A HL +K
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF--DK 165
Query: 166 DV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ F N ++ ++NG C + G++ A R+ M Q +VV FS +I K R
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKV-GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR 224
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + +F +M GI + YN++IH L K K +LM M + + P+V T N
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRTGEEV-FGLLESMRKM 339
+++ LCK + EA D M+ RG+ P + TY+A +D +R +V + ++M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
C +Y LI + + + ++ E+S P+ +Y LIH L G+L++A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ EM + +P+ T L D+ + +++ +A LKA
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T+I L K R+ A+ + EM P++VT +L+ + + C V +N
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K + ++ ALC+ V +A + M ++ V P N ++N +++G C +
Sbjct: 273 DSKIMP---DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP-NVVTYNALMDGHC-L 327
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
A +V+ M + +V+S++ +I+ Y K +++ K + LF++M R + +
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH L ++DAISL M +G P++VTY +L LCK R LD+A +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 306 QRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
P I+ Y LD + R GE + L ++ G QP TY ++I +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+++E+++NG P+ +Y + N + + EM + + T LL
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%)
Query: 69 HTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+T++ L K A ++D M RG E P++VT L+ +C ++V A+ F
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNALM---DGHCLRNEVDVAVKVF 338
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ C+ ++V A +L +++ P NT ++N +++G C+
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP-NTVTYNTLIHGLCH 397
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G ++A ++ EM RG D+V++ + K R+L K + L ++ + D +
Sbjct: 398 V-GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y ++ + + ++DA L ++ KG+ PNV TYN +I LCK L EA + F EM
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFS 356
+ G SP TY+ +R E + LLE M G T +L+ S
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 13/353 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI L K + D A L++EM P++ + T+L +C + V A+
Sbjct: 47 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL---HGFCKANRVENALWLLE 103
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + +++ LC+ V +A +M + P N ++ +++G+C
Sbjct: 104 QMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP-NVITYGTLVDGFCR- 161
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G A + +M++RG + ++++ I+ R L L+LF +M+ G C V
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG-SCPPDV 220
Query: 246 --YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ ++ +L K V DA L+++M KG +PNVVTY+SL+ LCKA KLDEA
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280
Query: 304 MLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M + G SP I TY+ +D + G +E + LLE M GCQP TY +L+ F + +
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + E G P+ +Y +L+ ++E A Q M +K +P
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 17/374 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y +++ L K K D A AL+ M P++VT T+ I +C + +
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI---IDGHCKLGRI 306
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + LL A C+ +DA L+ K P N ++N
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNS 365
Query: 178 ILNGWCNIIGSSREAER---VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+L+ +C E ER + M Q+G +VVS++ +I+ KA +H+ + L +QM
Sbjct: 366 LLDMFCK----KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
D +N +I A+ K V A L ++E G PN+VTYNSL+ LCK+R+
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 481
Query: 295 DEARQAFDEMLQR-GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIM 350
D+A EM ++ G SP I TY+ +D + + V + L M G P + TY +
Sbjct: 482 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 541
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I +WR V + +NG P +Y LI G L++A + + K
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 601
Query: 411 LLPEPKTDELLQDW 424
P+ T + DW
Sbjct: 602 SYPDVVTFSIFIDW 615
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 15/376 (3%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
T L +SG + + Y+T+I K+ + D A+ L++EM G P++VT +L
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT---VL 331
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDV 167
+ +C AI + + + LL C+ V+ A L+ K
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLH 225
P N S+N ++ G C +++ E V + +M D+V+F+ II K +
Sbjct: 392 VP-NVVSYNTVIAGLCK---ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 447
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSL 284
LF+ ++ G + YN+++H L K R A L++ M K G +P+++TYN++
Sbjct: 448 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
I LCK++++D A + F +ML G++P TY + + R +E +LE M K G
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY LI F + ++ + G+ PD +++ I L G+L +A +
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627
Query: 402 YYMEMKEKQLLPEPKT 417
M L+P+ T
Sbjct: 628 LLETMLRAGLVPDTVT 643
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 172/374 (45%), Gaps = 26/374 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSLVTKQTLLILIRRYCAV 116
+ GY + Y+ ++ L RK D+A L EM G P + T T++ + + V
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
D R + A + + + + LL LC+ + +A L+ C+ ++ +
Sbjct: 237 DDACRLVEAMVSK---GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT I++G C +G EA + EM G +VV+++ ++ + K + L
Sbjct: 294 NT-----IIDGHCK-LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M G + YN+++ K V+ A L+ SM +KG PNVV+YN++I LCK
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPT 344
A K+ E ++ML P I T++ +D + E+F L++ + GC P
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ---ESGCTPN 464
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY L+ + R+F + E++ + G PD +Y +I L + +++ A++ +
Sbjct: 465 LVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLF 524
Query: 404 MEMKEKQLLPEPKT 417
++M L P+ T
Sbjct: 525 LQMLSDGLAPDDVT 538
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 17/369 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+G+A + Y+T++ K + + A L+++M P +V+ T+ I C +
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV---INGLCKLD 128
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A + + + L+ CR ++ A L+ + P N ++
Sbjct: 129 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP-NAITY 187
Query: 176 NIILNGWCNIIGSSRE---AERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLF 231
N I++G C S R+ A +++ EM + G C DV ++S I+ K+ + RL
Sbjct: 188 NNIMHGLC----SGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 243
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ M G + Y++++H L K + +A +L++ M G +PN+VTYN++I CK
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 303
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
++DEA +EM+ G P + TY LD + G E+ GL+E M + G P TY
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L+ F + + ++ + + + G P+ SY +I L K+ E +M
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Query: 409 KQLLPEPKT 417
+P+ T
Sbjct: 424 NNCVPDIVT 432
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 10/246 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
IL G C+ G +A + EMS+ C D V+++ +I+ SK+ L +RL ++M
Sbjct: 16 ILRGLCDA-GQCSDAVLHFREMSK--TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 72
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + YN V+H K V++A+ L++ M +G P+VV+Y ++I LCK ++DE
Sbjct: 73 NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDE 132
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRKM---GCQPTNDTYIMLI 352
A + D+M+QRG P + TY +D R G ++ G +E +RKM G +P TY ++
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVG-DLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 353 KKFSRWRQFGNVFKVWNEISENGN-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
R+ + +++ E+ E+G+ PD +Y+ ++ +L +GK+++A + M K
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251
Query: 412 LPEPKT 417
P T
Sbjct: 252 SPNVVT 257
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 21/319 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T+IA L K K L+++M P +VT T+ I C +
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI---IDAMCKTY 444
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-------FCNKDVFPF 170
V A F + + + L+ LC+ + AE+L+ C+ D+ +
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT +++G C R A +++++M G+ D V++S +IS K R + + +
Sbjct: 505 NT-----VIDGLCKSKRVDR-AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 558
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M + G + Y +I K + A+ +++ + KG P+VVT++ I L K
Sbjct: 559 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYH----AFLDIIRTGEEVFGLLESMRKMGCQPTND 346
+L +A + + ML+ G+ P TY+ F D RT E+ L E MR+ GC+P N
Sbjct: 619 RGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT-EDAVDLFEVMRQCGCEPDNA 677
Query: 347 TYIMLIKKFSRWRQFGNVF 365
TY L+ + + ++
Sbjct: 678 TYTTLVGHLVDKKSYKDLL 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 6/234 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSLVTKQTLLILIRRYCA 115
++SG + Y++++ L K R+FD A L+ EM R P ++T T +I C
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT---VIDGLCK 513
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKS 174
V RA F A + ++S+LC+++ + +A +++ K+ F +
Sbjct: 514 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 573
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++G+C G+ +A + + +G DVV+FS I SK L + L + M
Sbjct: 574 YGTLIDGFCK-TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R G+ D YN ++ +DA+ L + M + G P+ TY +L+ L
Sbjct: 633 LRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+T+I L K ++ D A+ L +M P VT I+I C
Sbjct: 493 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS---IVISSLCKW 549
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A N + F G + L+ C+ N+ A ++ +K +P + +
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP-DVVT 608
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+I ++ W + G R+A + M + G+ D V+++ ++ + A + LF+ M
Sbjct: 609 FSIFID-WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKSMEEKGVAPN 277
++ G E D Y ++ L + KD ++ + KSM + G N
Sbjct: 668 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 41/194 (21%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R G++ V+ +++ L DA+ + M K P+ VTYN++I L K+ +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDR 59
Query: 294 LDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
LD+A + +EM+ G +P + +Y H F R E LLE M GC
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV-ENALWLLEQMVMRGCP------- 111
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
PD SYT +I+ L +++EA + +M ++
Sbjct: 112 ----------------------------PDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143
Query: 410 QLLPEPKTDELLQD 423
P T L D
Sbjct: 144 GCQPNVITYGTLVD 157
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 190/423 (44%), Gaps = 29/423 (6%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHST 65
LRE S +R K I ++L+ ++ WV WE + G +
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWE-----IYGEVVRGGIELNV 257
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ M+ L K RKF+ + +M G +VT TL I YC V A
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTL---INAYCREGLVEEAFQL 314
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
++ G+ + +L LC+ A+ ++ + P N ++N +L C
Sbjct: 315 LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP-NAATYNTLLVEIC 373
Query: 184 ---NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
NI+ EA+ ++ EMS+RG+ D+VSFS +I ++ +L++ L F +M+R GI
Sbjct: 374 RRDNIL----EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +Y +I + + DA+ + M +G +VVTYN+ + LCK + +A
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 301 FDEMLQRGISPTIRTYHAFLDIIR------TGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F+EM++RG+ P ++ F +IR ++ L E+M + +P TY LI
Sbjct: 490 FNEMVERGMVP---DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + + G ++W+++ PD SY +++ +G L EA +M EK + P
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606
Query: 415 PKT 417
T
Sbjct: 607 LVT 609
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 182/403 (45%), Gaps = 53/403 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T++ + + A + DEM P LV+ +L+ ++ R ++
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MF---CNKDVFPFN 171
+A+ F +R + L+ CR + DA + M C DV +N
Sbjct: 415 ---QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T LNG C +A+ ++ EM +RG+ D +F+ +I Y K N+ K L LF
Sbjct: 472 T-----FLNGLCKK-KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 232 DQMKRMGIECDRKVYNAVIHALAK----GR------------------------------ 257
+ M R ++ D+ YN +I K GR
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 258 -LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
L+ +A++L M EKG+ PN+VT N+LIK C++ + +A + +M+ GI P +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 317 HAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ +D ++ E+ F L+ M K G Q TY +++ F + +V ++ E
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
G PD ++Y++LI+ ++EA +++ EM ++ L+P+ +
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 177/445 (39%), Gaps = 61/445 (13%)
Query: 36 EVLSWVRNDWEAAFTFF-LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG 94
+VL R D F L + + HS+ M+ L + R+ A A I M
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 95 ETGPSLVTKQTLL--------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
+ ++L+ +L+R Y + AF +R +V I
Sbjct: 165 SGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINA 224
Query: 141 FQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM-- 197
LL L R V A E + N + NI++N C R+ E V
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC----KDRKFENVMFFL 280
Query: 198 -EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M +G+ D+V+++ +I+ Y + + + +L + G+E YNA+++ L K
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
A ++ M + G+ PN TYN+L+ +C+ + EA++ FDEM +RG+ P + ++
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 317 HAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSR---------------- 357
+ + ++ ++ L R+M G P N Y +LI F R
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 358 -------------------WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+ F + ++NE+ E G PD ++T LI +G +++
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M L P+ T L D
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLID 545
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 14/401 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA TF KQ ST +++ ++ + K + T +L +M P + T
Sbjct: 53 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV---YT 107
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L I+I C ++ V A +A + F L+ LC + +A HL +K
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF--DK 165
Query: 166 DV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ F N ++ ++NG C + G++ A R+ M Q +VV FS +I K R
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKV-GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR 224
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + +F +M GI + YN++IH L K K +LM M + + P+V T N
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRTGEEV-FGLLESMRKM 339
+++ LCK + EA D M+ RG+ P + TY+A +D +R +V + ++M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
C +Y LI + + + ++ E+S P+ +Y LIH L G+L++A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ EM + +P+ T L D+ + +++ +A LKA
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T+I L K R+ A+ + EM P++VT +L+ + + C V +N
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K + ++ ALC+ V +A + M ++ V P N ++N +++G C +
Sbjct: 273 DSKIMP---DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP-NVVTYNALMDGHC-L 327
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
A +V+ M + +V+S++ +I+ Y K +++ K + LF++M R + +
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH L ++DAISL M +G P++VTY +L LCK R LD+A +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 306 QRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
P I+ Y LD + R GE + L ++ G QP TY ++I +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+++E+++NG P+ +Y + N + + EM + + T LL
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%)
Query: 69 HTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+T++ L K A ++D M RG E P++VT L+ +C ++V A+ F
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNALM---DGHCLRNEVDVAVKVF 338
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ C+ ++V A +L +++ P NT ++N +++G C+
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP-NTVTYNTLIHGLCH 397
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G ++A ++ EM RG D+V++ + K R+L K + L ++ + D +
Sbjct: 398 V-GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y ++ + + ++DA L ++ KG+ PNV TYN +I LCK L EA + F EM
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFS 356
+ G SP TY+ +R E + LLE M G T +L+ S
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 45/400 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY + ++T+I L + + A AL+D M P LVT I++ C
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG---IVVNGLCKRG 235
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A++ ++ K G+ + ++ ALC YKNV DA +L NK + P N ++
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTY 294
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++ CN G +A R+ +M +R I +VV+FS +I + K L + +L+D+M
Sbjct: 295 NSLIRCLCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D Y+++I+ + +A + + M K PNVVTYN+LIK CKA+++D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 296 EARQAFDEMLQR-----------------------------------GISPTIRTYHAFL 320
E + F EM QR G+ P I TY L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + G E + E +++ +P TY ++I+ + + + + ++ +S G
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YT ++ G EEA + EMKE+ LP+ T
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 57/425 (13%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ +++ + K+ KFD +L ++M+ +L T ILI +C + A+
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS---ILINCFCRRSQLSLAL 136
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C + DA L M D F FNT
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT----- 191
Query: 178 ILNGWCNIIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G + +R +E V + M +G D+V++ +++ K ++ L L +M+
Sbjct: 192 LIHG---LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC------ 289
+ IE +YN +I AL + V DA++L M+ KG+ PNVVTYNSLI+ LC
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 290 -----------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
K KL EA + +DEM++R I P I TY + +
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 321 D---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + +E + E M C P TY LIK F + ++ +++ E+S+ G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIAS 437
+ +YT LIH F + + A + +M +LP+ T +L D N VE +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 438 LKAHQ 442
+ Q
Sbjct: 489 FEYLQ 493
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DA++L M + P++V ++ L+ + K K D ++M GIS + TY
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ +L M K+G +P T L+ F + + + ++ E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++ LIH LF + + EA M K P+ T
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 206/486 (42%), Gaps = 69/486 (14%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A L + ++ S+M ++ G++++++LV E+L + + + AF FF+WAG Q
Sbjct: 236 ADKLYKAIANNANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDC 295
Query: 61 YAHSTREYHTMIAILG----KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
Y+H R Y+ MI IL KV++F ++D M+ + V + LL+++R+Y
Sbjct: 296 YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKS--VPVEVLLMILRKYTEK 353
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
H ++ F K+ + E L KN ++
Sbjct: 354 HLA--HLHKFAKKKKIRVKTQPEINALNLLLDALCKNPSRGMRVL--------------- 396
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
E + M + Y+ I + KA + + LF+ M+
Sbjct: 397 ---------------EEMIEMGHTPDSFTYNTA-----IDSFCKAGMVTEATELFEFMRT 436
Query: 237 MGIECDR---KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
G K Y +I AL + ++ L+K M GV P+V TY +I+ +C A K
Sbjct: 437 KGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGK 496
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA + +EM +G P I TY+ FLD++ + EE GL M + GC P+ T+ M
Sbjct: 497 VEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNM 556
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + F+ W+E+ + G D +Y +I LF K+E+A E+ K
Sbjct: 557 LISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKG 616
Query: 411 L-LPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETR 469
+ LP K D L S I L+A I K S+ R+F R
Sbjct: 617 IKLPYRKFDCFLMQLS--------MIGDLQA-----------IHKLSEHMRKFYNPAMAR 657
Query: 470 RVVRHQ 475
R +Q
Sbjct: 658 RFALNQ 663
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L KV + A L+ + G P++V T+ I C V V A + +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI---IDSMCKVKLVNEAFDLYS 220
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+S C + DA L ++++ P + +F+I+++G+C
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINP-DVYTFSILVDGFCKE 279
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +EA+ V M ++GI DVV++ ++ Y + ++K +F+ M + G+ + +
Sbjct: 280 -GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ K + V +A++L K M K + P+VVTYNSLI LCK+ K+ A + DEM
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398
Query: 306 QRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG+ TY++ LD + +V LL M+ G QP TY +LI + +
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++ ++ G +YT +I N ++A +M++ +P KT E++
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 128/288 (44%), Gaps = 39/288 (13%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FNI++N + + G + + V+ + ++G + ++ + +I +H+ L D+
Sbjct: 93 TFNILINCFSQL-GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDK 151
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ +G ++ Y +I+ L K A+ L++ ++ K V PNVV YN++I +CK +
Sbjct: 152 VVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGL------------------ 332
++EA + EM+ +GISP + TY A + I+ + GL
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271
Query: 333 -----------------LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L M K G +P TY L+ + +Q ++N +++ G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ SY +I+ K++EA + EM K ++P+ T L D
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 175/381 (45%), Gaps = 8/381 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ ++ + K++ + T +L +M P++ T L ILI +C ++ VG A
Sbjct: 64 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT---LNILINSFCHLNRVGFAF 120
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGW 182
+ + F L+ LC + +A HL D F N ++ ++NG
Sbjct: 121 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 180
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C + G++ A R+ M Q DVV ++ II K R + + LF QM GI D
Sbjct: 181 CKV-GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +++HAL K +L+ M + P+VV +++++ LCK K+ EA + D
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299
Query: 303 EMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+QRG+ P + TY +D + +E + + M + G P +Y LI + +
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 359
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++ E+ PD +Y L++ L G+L++A + EM + +P+ T
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419
Query: 420 LLQDWSYNKQFVERQIASLKA 440
+L D + +E +A LKA
Sbjct: 420 ILLDSLCKNRHLEEAMALLKA 440
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 156/363 (42%), Gaps = 10/363 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I L KV A L+ M G P +V ++ I C V
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI---IDSLCKDRQV 221
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A N F + I + L+ ALC + L+ N + P + F+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP-DVVIFST 280
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G EA + M QRG+ DVV+++ ++ + + + +++FD M R
Sbjct: 281 VVDALCKE-GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 339
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D Y +I+ K + A+ L + M K P+ TYN+L+ LC +L +A
Sbjct: 340 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F EM+ RG P + TY LD + R EE LL+++ P Y ++I
Sbjct: 400 IALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDG 459
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + +++ +S G P +Y +IH L G L EA++ +MEM P+
Sbjct: 460 MCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 519
Query: 415 PKT 417
T
Sbjct: 520 GCT 522
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 10/344 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I L K R+ A+ L +M G P + T +L+ + C V +N
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 267
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A + M + V P + ++ +++G C +
Sbjct: 268 NSKILPDVV---IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP-DVVTYTTLMDGHC-L 322
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V+ M ++G DV+S++ +I+ Y K + K + LF++M R D K
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 382
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +++ L ++DAI+L M +G P++VTY+ L+ LCK R L+EA +
Sbjct: 383 YNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIE 442
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++P I+ Y+ +D + R G E L ++ G P+ TY ++I +
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 502
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
K++ E+ N PD +Y + N + A Q EM
Sbjct: 503 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 18/373 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + T+I L K A L D+M P++VT TL I C V +
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL---INGLCKVGNT 186
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI + ++ + + ++ +LC+ + V +A +L + + P + ++
Sbjct: 187 SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-DIFTYTS 245
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ CN+ + + +M I DVV FS ++ K + + + D M +
Sbjct: 246 LVHALCNLC-EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E D Y ++ + +A+ + M KG AP+V++Y +LI CK K+D+A
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 364
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F+EM ++ P +TY+ + + G ++ L M G P TY +L+
Sbjct: 365 MYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 424
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ R + I + PD Y +I + G+LE A + + K L P
Sbjct: 425 LCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPS 484
Query: 415 PKTDELLQDWSYN 427
W+YN
Sbjct: 485 V--------WTYN 489
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 42/280 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L K K A ++D M P +VT TL+ +C ++ A+ F
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLM---DGHCLQSEMDEAVKVFD 334
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
R FA + + L++ C+ + A +L C K+ P +TK++N ++ G C++
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYNTLMYGLCHV 393
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF-------------- 231
G ++A ++ EM RG D+V++S ++ K R+L + + L
Sbjct: 394 -GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452
Query: 232 -----DQMKRMG-IECDRKV---------------YNAVIHALAKGRLVKDAISLMKSME 270
D M R G +E R + YN +IH L K L+ +A L M+
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 512
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+P+ TYN++ + + + A Q +EML RG S
Sbjct: 513 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
+ DA+S + P++V + L+ + K + +M G+ P + T
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++F + R G F +L + K+G QP T+ LI+ + G +++++ +
Sbjct: 106 LINSFCHLNRVG-FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P+ +Y LI+ L G A + M++ P+
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 204
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G P++V T+ I C V
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTI---IDGMCKDKHV 213
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + + L+S ++DA L +++ P + +FNI
Sbjct: 214 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKP-DVYTFNI 272
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G+C G +E + V+ M ++GI +VV++ ++ Y + ++K + M +
Sbjct: 273 LVDGFCKD-GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D + YN +I K + V +A++L K M K + P+VVTYNSLI LCK K+ A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKK 354
+ DEM RG+ P I TY + LD + +V LL ++ G +P TY +LI
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++ ++ G ++YT +IH G +EA +MK+ +P+
Sbjct: 452 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511
Query: 415 PKTDELL 421
T E++
Sbjct: 512 AVTYEII 518
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 10/329 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I + K + + A+ L EM P++VT L I + V + AI+ F
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL---ISGFFTVGQLKDAIDLFN 256
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ C+ +++ + + M + + P N ++ +++G+C +
Sbjct: 257 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP-NVVTYCSLMDGYC-L 314
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A+ + MSQRG+ D+ S++ +I + K + + + + LF +M I D
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++I L K + A+ L+ M ++GV P+++TY+S++ LCK ++D+A ++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+GI P + TY +D + G E+ + E + G T +TY ++I F F
Sbjct: 435 DQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFD 494
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALF 391
+ +++ +N PD +Y +I +LF
Sbjct: 495 EALALLSKMKDNSCIPDAVTYEIIIRSLF 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT +F ++ G C + G +A + G D V + +I K L L
Sbjct: 126 NTITFTTLIKGLC-LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ ++ + +Y+ +I + K + V DA L M KG++PNVVTY++LI
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPT 344
+L +A F++M+ I P + T++ +D ++ G+ VF + M K G +P
Sbjct: 245 VGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAM---MMKQGIKPN 301
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY L+ + ++ + +S+ G PD SY LI K++EA +
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361
Query: 405 EMKEKQLLPEPKTDELLQD 423
EM K ++P+ T L D
Sbjct: 362 EMHHKHIIPDVVTYNSLID 380
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 46/271 (16%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
GK+++ T +A++ M+ G P++VT +L+ YC V +V +A + Y +
Sbjct: 281 GKMKEGKTVFAMM--MKQG-IKPNVVTYCSLM---DGYCLVKEVNKAKSILYTMSQRGVN 334
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
I+ + L+ C+ K V +A +L +K + P + ++N +++G C + G A
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVTYNSLIDGLCKL-GKISYAL 392
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ EM RG+ D++++S I+ K + K + L ++K GI + Y +I L
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Query: 254 AKGRLVKDA-----------------------------------ISLMKSMEEKGVAPNV 278
KG ++DA ++L+ M++ P+
Sbjct: 453 CKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDA 512
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
VTY +I+ L + D+A + EM+ RG+
Sbjct: 513 VTYEIIIRSLFDKDENDKAEK-LREMITRGL 542
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 19/234 (8%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+ +S I + + ++ LF ++ R +N ++ +L K + +SL +
Sbjct: 42 IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101
Query: 269 MEEKGVAP----------------NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
ME +G+ P N +T+ +LIK LC ++ +A D ++ G
Sbjct: 102 MEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLD 161
Query: 313 IRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
Y + + E L+ +R++ QP Y +I + + + F +++
Sbjct: 162 QVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 221
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
E+ G P+ +Y+ALI F G+L++A + +M + + P+ T +L D
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 176/370 (47%), Gaps = 19/370 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKV-RKFDTAWALIDEMRGGETGPSLVTKQ 104
+ A FF WAG+Q GY H Y+ ++ IL K F T D + G P+LVT +
Sbjct: 8 DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG-CSPNLVTFK 66
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
ILIR C RA+ A F A + F L+ L + N A L F N
Sbjct: 67 ---ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL-FEN 122
Query: 165 KD---VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG--ICYDVVSFSCIISCYS 219
+ V P ++N +++G C G+ +A + EM ++G D+V+++ +I+ +
Sbjct: 123 MESSRVKP-EIVTYNTVISGLCK-SGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
+A + + ++MK GI D N ++ + K V++A+ ++ M+ G P+V+
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESM 336
TYNS+I LC A K+ EA + M SP + T++ LD + G +LE M
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ P TY +L+ R Q F + EI G PD +YT+L+ L +G++
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357
Query: 397 EEAHQYYMEM 406
EEAH+ EM
Sbjct: 358 EEAHKLVKEM 367
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 14/420 (3%)
Query: 19 RNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAILGK 77
R K++ GI + ++S + D + + G K +G Y+++I L
Sbjct: 192 REKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCV 251
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
K A ++ M P LVT TLL +C + RA+ R
Sbjct: 252 AGKVVEAAEILKTM---SCSPDLVTFNTLL---DGFCKAGMLPRALEVLEEMCRENILPD 305
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + L++ LCR VQ A +L+ + P + ++ +++G C G EA ++
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKS-GEIEEAHKL 363
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EMS RG VV +S ++S Y +A N+HK + +M + + YN V+ L K
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ A+SL+ + +G P+VVTYN+LI LCKA ++ EA DEM RG P T
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Query: 316 YHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ + + R G ++ + L+ M + P Y LI + + + V + +
Sbjct: 484 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMR 543
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G D +Y LI ++ G++ EA Y EM + LP+ T + L++ + + E
Sbjct: 544 GQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +F I++ G C G + A + + + DV F+ +I K N + ++L
Sbjct: 61 NLVTFKILIRGNCKA-GQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPL 288
F+ M+ ++ + YN VI L K ++ A L++ M KG AP++VTYN+LI
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
+A ++ EA ++M GI+P + T + + I + G EE +L+ M+ G P
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +I G V + + PD ++ L+ G L A + E
Sbjct: 240 ITYNSIIHALCVA---GKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 406 MKEKQLLPEPKTDELL 421
M + +LP+ T +L
Sbjct: 297 MCRENILPDVITYTIL 312
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q G +DV S++ ++ K+ + + +++ + G + + +I K
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A+ +++++E VAP+V +N LI L K D+A + F+ M + P I TY+ +
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTND--TYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ ++G E+ LLE M + G + D TY LI F R + ++ G
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD + L+ + +G +EEA + MK +P+ T
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 8/277 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC Q+A L+ D P + S+ ++NG+ G S +A + EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE-GDSDKAYSTYHEM 222
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RGI DVV+++ II+ KA+ + K + + + M + G+ D YN+++H
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+AI +K M GV P+VVTY+ L+ LCK + EAR+ FD M +RG+ P I TY
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 320 LDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L T E+ GLL+ M + G P + + +LI +++ + V++++ + G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ +Y A+I L +G++E+A Y+ +M ++ L P
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 40/320 (12%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI-- 433
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++G C R AE + +EM RGIC + + F+ II + K
Sbjct: 434 DEGLSPGNI-VYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LF+ M R+G++ + YN +I+ + +A+ L+ M G+ PN VTY++
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
LI CK ++++A F EM G+SP I TY+ L GL ++ R +
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ---------GLFQTRRTAAAK- 601
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+++ I+E+G + S+Y ++H L N ++A Q +
Sbjct: 602 ----------------------ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 404 MEMKEKQLLPEPKTDELLQD 423
+ L E +T ++ D
Sbjct: 640 QNLCLMDLKLEARTFNIMID 659
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 169/400 (42%), Gaps = 78/400 (19%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+ I + D +A + ++ + + +++ALC+
Sbjct: 188 RGGGSPPDVVSYTTV---INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P + ++N IL+G+C +++
Sbjct: 245 QAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI D V++ +I A AK V A+ + M ++G+ PN VTY ++I LCK+ +++
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVF------------------- 330
+A F++M+ G+SP Y++ + + T EE+
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 331 -------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L E M ++G +P TY LI + + K+ + + G
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y+ LI+ ++E+A + EM+ + P+ T
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 10/381 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y +I IL K + + A ++M P + +L I C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL---IHGLCTC 454
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ RA + F ++ + C+ V ++E L + V P N +
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP-NVIT 513
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++NG+C + G EA ++ M G+ + V++S +I+ Y K + L LF +M
Sbjct: 514 YNTLINGYC-LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ D YN ++ L + R A L + E G + TYN ++ LCK +
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
D+A Q F + + RT++ +D +++ G +E L + G P TY ++
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + +++ + +NG D ++ L G++ A Y + EK
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752
Query: 412 LPEPKTDELLQDWSYNKQFVE 432
E T L D ++ E
Sbjct: 753 SLEASTASLFIDLLSGGKYQE 773
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL- 265
D+ ++ +I C +A L + + G D + ++ L + DA+ +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD- 321
++ M E G PNV +YN L+K LC + EA + M G P + +Y ++
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 322 IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G+ + + M G P TY +I + + +V N + +NG PD
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H +G+ +EA + +M+ + P+ T LL D+
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V P++ TY LI
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C+A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN---GNGPDRSSYTALIHALFLNGKLEEA 399
P +Y +L+K + ++ + ++++ G+ PD SYT +I+ F G ++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ Y EM ++ +LP+ T
Sbjct: 216 YSTYHEMLDRGILPDVVT 233
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 21/334 (6%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E+ ++ + LV VL + N A FF YAH + + I I G++R +
Sbjct: 58 LEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDY 117
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
T W L+D MR GP+ +T I+ RY + RAI F++ + F
Sbjct: 118 KTLWTLVDRMRTRRLGPN---PKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSF 174
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
+L LC+ K V+ A++ +F K F G +EA +++M +
Sbjct: 175 NTILDVLCKSKRVEMADNKLF----------KVFRGFFRA-----GQLKEAWEFFLQMKK 219
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
R DVV+++ ++ + A + K R+F++M G+ YNA I L K V++
Sbjct: 220 RKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVEN 279
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
AIS+ + M KG PN TYN +I+ LC ++++A + M P ++ Y+ +
Sbjct: 280 AISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIR 339
Query: 322 IIRTGEEVFGLLESMRKMG---CQPTNDTYIMLI 352
EE+ L KMG C P DTY +LI
Sbjct: 340 YFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILI 373
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 16/210 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF I + R+ + L D+M+ + + K + + AI + SM
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE-- 327
E G ++ ++N+++ LCK+++++ A + + F R G+
Sbjct: 163 HEHGCVQDLNSFNTILDVLCKSKRVEMADN--------------KLFKVFRGFFRAGQLK 208
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + M+K C+ TY ++ F + +V+NE+ G P ++Y A I
Sbjct: 209 EAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFI 268
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L +E A + EM K +P T
Sbjct: 269 QVLCKKDNVENAISVFEEMLRKGYMPNSTT 298
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 14/379 (3%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAIL-----GKVRKFDTAWALIDEMRGGETGPSLVT 102
A T A + G+A + Y+ ++ L R +D A + +M P++ T
Sbjct: 151 ALTLLHLANRH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
++IR + D+ + + ++ + + + L+ A C+ K V++A L+
Sbjct: 210 YN---VIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLR 266
Query: 163 CNK-DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
N S+N ++NG C G E + EM +G+ D V+++ +++ + K
Sbjct: 267 AMAVGGVAANLISYNSVINGLCGK-GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
NLH+ L L +M G+ + Y +I+ + K + A+ + M +G+ PN TY
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRK 338
+LI C+ ++EA + EM+ G SP++ TY+A + + +E G+L M +
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P +Y +I F R R+ G F++ E+ E G PD +Y++LI L L KL E
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505
Query: 399 AHQYYMEMKEKQLLPEPKT 417
A + EM + L P+ T
Sbjct: 506 AFDLFREMMRRGLPPDEVT 524
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 177/369 (47%), Gaps = 10/369 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + + Y+ +I + + + +M P++VT TL I C
Sbjct: 200 RNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL---IDASCKKK 256
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A+ A A + + +++ LC + + L+ K + P + ++
Sbjct: 257 KVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP-DEVTY 315
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++NG+C G+ + + EM +G+ +VV+++ +I+C KA NL + + +FDQM+
Sbjct: 316 NTLVNGFCKE-GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ + + Y +I + L+ +A ++ M G +P+VVTYN+L+ C ++
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
EA M++RG+ P + +Y + R + F + E M + G P TY LI
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++ F ++ E+ G PD +YT+LI+A ++G+L +A + + EM ++ L
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554
Query: 413 PEPKTDELL 421
P+ T +L
Sbjct: 555 PDNVTYSVL 563
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ K L+ EM G P++VT TL I C ++ RA+ F
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTL---INCMCKAGNLSRAVEIFD 371
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--SFNIILNGWCNI 185
+ + L+ C+ K + + + + V F+ ++N +++G+C
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQ-KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC-F 429
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G +EA + M +RG+ DVVS+S +I+ + + R L K ++ ++M G+ D
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+++I L + + +A L + M +G+ P+ VTY SLI C +L +A + DEM+
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549
Query: 306 QRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLI--------- 352
QRG P TY ++ + RT LL+ + P + TY LI
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV-PDDVTYNTLIENCSNNEFK 608
Query: 353 ------KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
K F +V+ + + + P+ + Y +IH G + +A+ YME+
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Query: 407 K 407
+
Sbjct: 669 E 669
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK-----ARKLDEARQ 299
V++ V+ +L++ V A++L+ G AP V++YN+++ L + R D+A +
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F +M++ G+SP + TY+ + ++ G E+ G + M K G P TY LI
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ + ++ G + SY ++I+ L G++ E + EM+ K L+P+
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313
Query: 417 T 417
T
Sbjct: 314 T 314
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 20/270 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G T Y ++I L +K A+ L EM P VT +L I YC
Sbjct: 480 EKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSL---INAYCVDG 536
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFN 171
++ +A+ + F + L++ L + + A+ L+ D +N
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596
Query: 172 T----------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
T KS ++ G+C + G EA+RV+ M QR + ++ +I +S+
Sbjct: 597 TLIENCSNNEFKSVEGLVKGFC-MKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
N+HK L+ +++ C A++ ALA+ + + L++++ +
Sbjct: 656 GNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVA 715
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L++ K +D EM + G+ P
Sbjct: 716 KVLVEVNFKEGNMDAVLNVLTEMAKDGLLP 745
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 9/385 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS + + Y+ +I D A D M P++VT TL I YC +
Sbjct: 198 QSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTL---IDGYCKLR 254
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFN 176
+ + + + +++ LCR +++ ++ NK + + ++N
Sbjct: 255 KIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYN 314
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+C G+ +A + EM + G+ V++++ +I KA N+++ DQM+
Sbjct: 315 TLIKGYCKE-GNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + + Y ++ ++ + +A ++K M + G +P+VVTYN+LI C A K+ +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVD 433
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIK 353
A ++M ++G++P + +Y L +V L RKM G +P TY LI+
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQ 493
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F R+ +++E+ G PD +YTALI+A + G L++A Q + EM EK +LP
Sbjct: 494 GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP 553
Query: 414 EPKTDELLQDWSYNKQFVERQIASL 438
+ T +L + NKQ R+ L
Sbjct: 554 DVVTYSVLIN-GLNKQARTREAKRL 577
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 175/439 (39%), Gaps = 90/439 (20%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
+ E S +L +N+ E F WA + + R + IL + + + TA L +
Sbjct: 47 TPEAASNLLLKSQNNQELILKFLTWANPHQFF--TLRCKCITLHILTRFKLYKTAQTLAE 104
Query: 90 EMRG---GETGPSLV-------------TKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
++ + SLV T ++++ Y + + +A++ + +
Sbjct: 105 DVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHG 164
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F G+ + +L A R K NI AE
Sbjct: 165 FMPGVLSYNAVLDATIRSKR----------------------NISF------------AE 190
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
V+ EM Q + +V +++ +I + A NL LR FD+M++ G + YN +I
Sbjct: 191 NVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGY 250
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNV----------------------------------- 278
K R + D L++SM KG+ PN+
Sbjct: 251 CKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE 310
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLES 335
VTYN+LIK CK +A EML+ G+SP++ TY + + + + G L+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
MR G P TY L+ FS+ ++V E+ +NG P +Y ALI+ + GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430
Query: 396 LEEAHQYYMEMKEKQLLPE 414
+ +A +MKEK L P+
Sbjct: 431 MVDAIAVLEDMKEKGLTPD 449
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 25/384 (6%)
Query: 49 FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI 108
+F L + GY+ Y+T+I K F A + EM PS++T +L
Sbjct: 294 ISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSL-- 351
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV- 167
I C ++ RA + + L+ + + +A ++ D
Sbjct: 352 -IHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + ++N ++NG C I G +A V +M ++G+ DVVS+S ++S + ++ ++ +
Sbjct: 411 FSPSVVTYNALINGHC-IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEA 469
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
LR+ +M GI+ D Y+++I + R K+A L M G+ P+ TY +LI
Sbjct: 470 LRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINA 529
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
C L +A Q +EM+++G+ P + TY ++ + RT E LL+ + P
Sbjct: 530 YCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV-P 588
Query: 344 TNDTY---------------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
++ TY + LIK F +V+ + E + PD ++Y +IH
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIH 648
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLL 412
G + +A+ Y EM + L
Sbjct: 649 GHCRGGDIRKAYSLYKEMVKSGFL 672
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 179/423 (42%), Gaps = 55/423 (13%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+ + A FF K+ G + Y+T+I K+RK D + L+ M P+L++
Sbjct: 220 NLDVALRFFDRMEKK-GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278
Query: 104 QTLL--------------------------------ILIRRYCAVHDVGRAINAFYAYKR 131
++ LI+ YC + +A+ R
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
+ + + L+ ++C+ N+ A + + + P N +++ +++G+ G
Sbjct: 339 HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCP-NERTYTTLVDGFSQK-GYM 396
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
EA RV EM G VV+++ +I+ + A + + + + MK G+ D Y+ V
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ + V +A+ + + M KG+ P+ +TY+SLI+ C+ R+ EA FDEML+ G+
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGL 516
Query: 310 SPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLI---KKFSRWRQFGN 363
P TY A ++ + ++ L M + G P TY +LI K +R R+
Sbjct: 517 PPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKR 576
Query: 364 VF------------KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ ++ + EN + + S +LI + G + EA Q + M EK
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNH 636
Query: 412 LPE 414
P+
Sbjct: 637 KPD 639
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 63/303 (20%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G++ S Y+ +I K A A++++M+ P +V+ T+L +C +D
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL---SGFCRSYD 465
Query: 119 VGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTK 173
V A+ KR A GI+ + L+ C + ++A L V P +
Sbjct: 466 VDEALRV----KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF 521
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK-ARNLHK---VLR 229
++ ++N +C + G ++A ++ EM ++G+ DVV++S +I+ +K AR +L+
Sbjct: 522 TYTALINAYC-MEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 230 LFDQ--------------------------------MKRMGIECDR-------------- 243
LF + MK M E D+
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDG 640
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN +IH +G ++ A SL K M + G + VT +L+K L K K++E
Sbjct: 641 TAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIAN 700
Query: 304 MLQ 306
+L+
Sbjct: 701 VLR 703
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 32/434 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY + Y+ ++ + + + A ++ M P + T+ I +C
Sbjct: 363 ERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTI---ISGFCKAG 419
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
+ A + R + L+ ALC+ + A+ L M D P + ++
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP-DVVAY 478
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQM 234
+I+++ C EAE W+++ + CY DVV+++ ++ K+R ++ LFD+M
Sbjct: 479 SILIHALCKA-KRLPEAES-WLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ D Y+ VIH+ K + A +++ M+E P+VVTY++LI LCKA +
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
D+A F EML G +P + TY+ +D I E+ +LE MRK C P + TY L
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCL 656
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + ++V E+ + G PDR +Y L+ AL LE Q EM+
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME---- 712
Query: 412 LPEPKTDELLQDWSYNKQFVERQI-------ASLKAHQPQSGQNTRVISKKSDQDREFLQ 464
T+E W+ N + R + ++ TRV+ K DQ +F
Sbjct: 713 ----ATEE--GQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSK-DQQGQFSP 765
Query: 465 QPETRRV--VRHQG 476
+P RV V QG
Sbjct: 766 RPHQYRVTAVATQG 779
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 182/423 (43%), Gaps = 47/423 (11%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
K+++ +V +VL VRN +AA FF WA Q GY H T + ++ L ++++ A +
Sbjct: 808 KLTTTVVGKVLQGVRN-GDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQV 866
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
P++ T ILI C D+G A R + ++
Sbjct: 867 YRNKLC--CSPNMF---TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKG 921
Query: 148 LCRYKNVQDAEHLM-------FCNKDVFPF------------------------------ 170
LC + + A L C DVF +
Sbjct: 922 LCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSP 981
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +++ +L+G C G EA + M++ G ++V+++ II + K + + L
Sbjct: 982 NVVTYSSLLHGLCK-AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 1040
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G + + Y ++ A K +DAI L++ M EKG PN+ TYNSL+ CK
Sbjct: 1041 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 1100
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDT 347
+++ A Q M+Q+G P + +Y+ + + +V LLE M C P T
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ +I + + ++++N I E+G P+ +Y +L+H L + + ++A EM
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 408 EKQ 410
KQ
Sbjct: 1221 RKQ 1223
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 17/374 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y +++ L K K D A AL+ M P++VT T+ I +C + +
Sbjct: 978 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI---IDGHCKLGRI 1034
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + LL A C+ +DA L+ K P N ++N
Sbjct: 1035 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNS 1093
Query: 178 ILNGWCNIIGSSREAER---VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+L+ +C E ER + M Q+G +VVS++ +I+ KA +H+ + L +QM
Sbjct: 1094 LLDMFCK----KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
D +N +I A+ K V A L ++E G PN+VTYNSL+ LCK+R+
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 1209
Query: 295 DEARQAFDEMLQR-GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIM 350
D+A EM ++ G SP I TY+ +D + + V + L M G P + TY +
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I +WR V + +NG P +Y LI G L++A + + K
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329
Query: 411 LLPEPKTDELLQDW 424
P+ T + DW
Sbjct: 1330 SYPDVVTFSIFIDW 1343
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 11/374 (2%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
T L +SG + + Y+T+I K+ + D A+ L++EM G P++VT +L
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT---VL 1059
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDV 167
+ +C AI + + + LL C+ V+ A L+ K
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N S+N ++ G C E + +M D+V+F+ II K +
Sbjct: 1120 VP-NVVSYNTVIAGLCKAT-KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLIK 286
LF+ ++ G + YN+++H L K R A L++ M K G +P+++TYN++I
Sbjct: 1178 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID 1237
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LCK++++D A + F +ML G++P TY + + R +E +LE M K G P
Sbjct: 1238 GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 1297
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LI F + ++ + G+ PD +++ I L G+L +A +
Sbjct: 1298 GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELL 1357
Query: 404 MEMKEKQLLPEPKT 417
M L+P+ T
Sbjct: 1358 ETMLRAGLVPDTVT 1371
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 45/401 (11%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+R ++E ++S E+V +VL + D AA FF WA + GY H + ++ +L K
Sbjct: 80 LRVALDEYRGQLSPEIVGKVLQRLI-DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVK 138
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
++ A L G+ G VT TL+ R G+ + A+ +
Sbjct: 139 AHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIR------AGKILPAYELFDEM----- 187
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
N+ + IL G C+ G +A +
Sbjct: 188 --------------------------NRKGLKAHAGVHKSILRGLCD-AGQCSDAVLHFR 220
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EMS + D V+++ +I+ SK+ L +RL ++M G + YN V+H K
Sbjct: 221 EMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V++A+ L++ M +G P+VV+Y ++I LCK ++DEA + D+M+QRG P + TY
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339
Query: 318 AFLD-IIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+D R G ++ G +E +RKM G +P TY ++ F R +V + +
Sbjct: 340 TLVDGFCRVG-DLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G PD +Y+ +I GKL EAH +M + P+
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 18/349 (5%)
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ-----DAEHLMF---CNKDVF 168
H + R +N+ +A++ + A +E F G L+ K +Q DA F +++ +
Sbjct: 783 HKIVRILNSRFAWEYAETA--LERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGY 840
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+T + N +L ++ R + + + ++ ++ +F+ +I +A ++
Sbjct: 841 NHDTYTCNCLLQA---LLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAY 897
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIKP 287
L +M R G+ + ++N VI L R + A+ L K MEE G P+V TY++++
Sbjct: 898 ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPT 344
L K+ K+D+A + ++M+ +G SP + TY + L + + G +E LL+ M + GC P
Sbjct: 958 LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +I + + + + E+ + G P+ +YT L+ A GK E+A
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
M EK +P T L D K VER L + Q G V+S
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERA-CQLLSSMIQKGCVPNVVS 1125
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 144/319 (45%), Gaps = 21/319 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T+IA L K K L+++M P +VT T+ I C +
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI---IDAMCKTY 1172
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-------FCNKDVFPF 170
V A F + + + L+ LC+ + AE+L+ C+ D+ +
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT +++G C R A +++++M G+ D V++S +IS K R + + +
Sbjct: 1233 NT-----VIDGLCKSKRVDR-AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNV 1286
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M + G + Y +I K + A+ +++ + KG P+VVT++ I L K
Sbjct: 1287 LELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 1346
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYH----AFLDIIRTGEEVFGLLESMRKMGCQPTND 346
+L +A + + ML+ G+ P TY+ F D T E+ L E MR+ GC+P N
Sbjct: 1347 RGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT-EDAVDLFEVMRQCGCEPDNA 1405
Query: 347 TYIMLIKKFSRWRQFGNVF 365
TY L+ + + ++
Sbjct: 1406 TYTTLVGHLVDKKSYKDLL 1424
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 6/234 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSLVTKQTLLILIRRYCA 115
++SG + Y++++ L K R+FD A L+ EM R P ++T T +I C
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT---VIDGLCK 1241
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKS 174
V RA F A + ++S+LC+++ + +A +++ K+ F +
Sbjct: 1242 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 1301
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++G+C G+ +A + + +G DVV+FS I SK L + L + M
Sbjct: 1302 YGTLIDGFCK-TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R G+ D YN ++ L +DA+ L + M + G P+ TY +L+ L
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 152/376 (40%), Gaps = 32/376 (8%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+T+I L K ++ D A+ L +M P VT I+I C
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS---IVISSLCKW 1277
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A N + F G + L+ C+ N+ A ++ +K +P + +
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP-DVVT 1336
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+I ++ W + G R+A + M + G+ D V+++ ++ + A + LF+ M
Sbjct: 1337 FSIFID-WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKSMEEKG----------------VAPN 277
++ G E D Y ++ L + KD ++ + KSM + G V +
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEAD 1455
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLE 334
V +++ K +AR+ F+ M QR + + A L + + E+ FGL
Sbjct: 1456 VRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWR 1511
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLN 393
M G +P T++ L+ + IS + G P ++ +I L
Sbjct: 1512 VMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRL 1571
Query: 394 GKLEEAHQYYMEMKEK 409
G + EA + M K
Sbjct: 1572 GLVNEAEDLMLGMPCK 1587
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 18/349 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ LGK + A + D M P++ T L+ R+ V + A+ F
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK---VGQLDMALGLFA 194
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNG 181
KR F + + LL ALC V A L C+ D + ++T ++NG
Sbjct: 195 EMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST-----LVNG 249
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
G EA +V+ EM RG+ D+V+++ +++ +KA N+ +V +L +M R G
Sbjct: 250 LGKS-GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +N ++ AL K A + M E G P++++YN LI + +ARQ
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM++ G P +TY++ + + T +E F +LE M GC+P TY L+ +
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKR 428
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ +++ ++ + G PD SY I L + +L+EA + +MK
Sbjct: 429 GENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMK 477
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 9/255 (3%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ V F TK +I++N G AE V+ ++ Q+G D +++ +I + ++
Sbjct: 61 CSPTVHAF-TKLIDILVNS-----GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSG 114
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L + +F +MK G E D Y +++AL K V++A S +M E+G+ PN+ TYN
Sbjct: 115 QLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYN 174
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKM 339
L+ K +LD A F EM +RG P++ TY+ LD + + V L M
Sbjct: 175 LLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD 234
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
GC P + TY L+ + + KV+ E+ + G D +Y +L+ L G ++
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 400 HQYYMEMKEKQLLPE 414
+ EM K P+
Sbjct: 295 WKLMKEMSRKGFHPD 309
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 160/351 (45%), Gaps = 8/351 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I G+ + D+A + EM+ + P + T L+ V A + F
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD---EYTYGFLVNALGKAGRVQEARSFFD 159
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
A I + L+ A + + A L + F + ++NI+L+ C+
Sbjct: 160 AMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA- 218
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G A +++ +M+ G D ++S +++ K+ + + ++F +M G+ D Y
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N+++ LAK + LMK M KG P+ ++N+++ L KA K D AR+ F M++
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G P + +Y+ +D R G+ + +LE M + G P TY LI + Q
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F V E+ G PD +Y L+ L G+ + A + + +MK+K + P+
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 13/288 (4%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L++AL + VQ+A + + P N ++N++++ + + G A ++ EM +
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTP-NIPTYNLLMDAFRKV-GQLDMALGLFAEMKR 198
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
RG VV+++ ++ A + +LF +M G D Y+ +++ L K V++
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEE 258
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A + + M ++GVA ++V YNSL+ L KA +D + EM ++G P +++ +D
Sbjct: 259 AHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMD 318
Query: 322 II------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ EVF M + GC+P +Y +LI ++R+ ++ E+ E G
Sbjct: 319 ALGKANKPDAAREVFA---RMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ +Y +LIH L +G+++EA EM+ P+ T L D
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 3/256 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +EA + M +RG+ ++ +++ ++ + K L L LF +MKR G + Y
Sbjct: 149 GRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY 208
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL V A L M G +P+ TY++L+ L K+ +++EA + F EM+
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268
Query: 307 RGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG++ + Y++ L + + V+ L++ M + G P ++ ++ + +
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDA 328
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+V+ + E+G PD SY LI + G +A Q EM E +PE KT L
Sbjct: 329 AREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388
Query: 424 WSYNKQFVERQIASLK 439
W V+ A L+
Sbjct: 389 WLATDGQVDEAFAVLE 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 42/271 (15%)
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++L W G E + EM G + +I+ Y + LF+Q +
Sbjct: 3 VVLASW----GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAES 58
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ +I L + A + K + +KG + YN LI+ ++ +LD
Sbjct: 59 FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118
Query: 297 ARQA-----------------------------------FDEMLQRGISPTIRTYHAFLD 321
A + FD ML+RG++P I TY+ +D
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178
Query: 322 IIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R ++ GL M++ G QP+ TY +L+ + G K++++++ +G P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
D +Y+ L++ L +G++EEAH+ + EM ++
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDR 269
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI- 322
+L+K M +G T LI + K +A F++ SPT+ + +DI
Sbjct: 16 TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ +G E + + + + GCQ Y +LI+ F R Q + +++ E+ G+ PD
Sbjct: 76 VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y L++AL G+++EA ++ M E+ L P T LL D
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 7/234 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A Y++++A L K D W L+ EM P + T++ + + D
Sbjct: 270 GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK-ANKPDA 328
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
R + A K + + L+ + R+ + A ++ P TK++N
Sbjct: 329 AREVFARMVESGCK--PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP-ETKTYNS 385
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ W G EA V EM G DVV+++ ++ K + RLF QMK
Sbjct: 386 LIH-WLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDK 444
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
G+E D Y I LA + +A+ L K M+ G + Y LI+ +A
Sbjct: 445 GVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRA 498
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 170/379 (44%), Gaps = 18/379 (4%)
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
AI+ + +DT +L +M P++ T L ILI + + V A + +
Sbjct: 106 AIVKMGQYYDTVISLTKQMELAGLSPNIYT---LSILINCFSHLQRVDLAFSVLAKIIKL 162
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNII 186
I F L++ LC+ A L C DV+ + T I+NG C I
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT-----IINGLCKI- 216
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + A + +M + G +VV++S II + K R +++ L +F MK GI D Y
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++I L K+A +L+ M + P++VT+N L+ +CK K+ EA+ M +
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336
Query: 307 RGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G+ P + TY + + EV L ++M GC+P +Y +LI + + ++
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++NE+ G P+ SY LIH L G L EA + M LP T +L D
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456
Query: 424 WSYNKQFVERQIASLKAHQ 442
+ + + +A Q
Sbjct: 457 GFCKQGYFGKAFRLFRAMQ 475
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 167/366 (45%), Gaps = 18/366 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + T+I L KV KF A L D+M P + T T +I C + +
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT---IINGLCKIGET 219
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK------DVFPFNTK 173
A + + + ++ + + + V +A + K D+F +N+
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS- 278
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ G CN +EA + EM I D+V+F+ ++ K + + +
Sbjct: 279 ----LIQGLCN-FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M MG+E D Y+++++ + V +A L +M KG P+V +YN LI CK ++
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+DEA+Q F+EM+ +G++P +Y+ + + + G E L ++M G P TY +
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ F + FG F+++ + + P+ Y LI A+ +G L +A + + E+ K
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 411 LLPEPK 416
L P +
Sbjct: 514 LQPNAQ 519
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 193/461 (41%), Gaps = 51/461 (11%)
Query: 3 TLVDILREFSH-KRSEMR----NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK 57
TL ++ FSH +R ++ KI + G++ + + +++W+ + A L+
Sbjct: 135 TLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM 194
Query: 58 QS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+I L K+ + A L+ +M P++VT T++ R+
Sbjct: 195 VARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD--- 251
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A++ F K + I + L+ LC + ++A L+ + ++ P + +
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP-DIVT 310
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI-------------------- 214
FN++++ C G EA+ V M++ G+ DVV++S +
Sbjct: 311 FNVLVDTICKE-GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Query: 215 ---------------ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
I+ Y K + + + +LF++M G+ + YN +IH L + +
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A +L K+M G PN+ TY+ L+ CK +A + F M P + Y+
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489
Query: 320 LD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+D + ++G + L + G QP Y +I + + + + E+G
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 549
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD SY +I + A Q EM++K + + T
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 585
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 14/356 (3%)
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H T ++ ++++L + FD AW + +E + ++ + I+I+ C D+ +
Sbjct: 165 HVTNTFNNLLSLLIRSNCFDIAWWVFNEFKR----KVVMDAYSFGIMIKGRCEAGDLMKG 220
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILN 180
+ F F++ + + L+ C+ +V+ A+ L FC D N S +++N
Sbjct: 221 FRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKL-FCTMDRLGLVANHHSCGVLMN 279
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G+ G RE ++ M GI + +++C+IS Y AR + K L +F +M+ GI
Sbjct: 280 GFFKQ-GLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIA 338
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN L +G+ +A+ ++ + + G++PN+VTYN LI C K+D A +
Sbjct: 339 YGVITYNX--GGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRL 396
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSR 357
F+++ G+SPT+ TY+ + E + G L+ +++M P+ TY +LI F+R
Sbjct: 397 FNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTYXILIDAFAR 456
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + + ++G D ++ LIH L +NG ++EA + + E L P
Sbjct: 457 LNYTKKTCEMHSLMEKSGLVSD-VXHSVLIHGLCMNGNMKEASKLLKSLGELHLEP 511
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 8/265 (3%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
SF I++ G C G + R+ + + G +VV ++ +I K+ ++ +LF
Sbjct: 203 SFGIMIKGRCEA-GDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCT 261
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R+G+ + +++ K L ++ + ++M+ G+ PN YN +I C AR
Sbjct: 262 MDRLGLVANHHSCGVLMNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARM 321
Query: 294 LDEARQAFDEMLQRGISPTIRTYH--AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+D+A F EM ++GI+ + TY+ + GE V ++ + K+G P TY +L
Sbjct: 322 VDKALNVFAEMREKGIAYGVITYNXGGLCRGKKFGEAV-KIVHQVNKVGLSPNIVTYNIL 380
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I F + +++N++ NG P +Y LI L A EM+E+ +
Sbjct: 381 INGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 440
Query: 412 LPEPKTDELLQD----WSYNKQFVE 432
P T +L D +Y K+ E
Sbjct: 441 PPSKVTYXILIDAFARLNYTKKTCE 465
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDV 167
+I YC V +A+N F + A G+ + LCR K +A ++ NK
Sbjct: 312 VISEYCNARMVDKALNVFAEMREKGIAYGVITYN--XGGLCRGKKFGEAVKIVHQVNKVG 369
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++NI++NG+C++ G A R++ ++ G+ +V+++ +I+ YSK NL
Sbjct: 370 LSPNIVTYNILINGFCDV-GKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGA 428
Query: 228 LRLFDQMKRMGIECDRKVY----------------------------------NAVIHAL 253
L L +M+ I + Y + +IH L
Sbjct: 429 LDLVKEMEERCIPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGLVSDVXHSVLIHGL 488
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+K+A L+KS+ E + PN V YN++I CK A + F+EM+ + P +
Sbjct: 489 CMNGNMKEASKLLKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNV 548
Query: 314 RTYHAFLDII 323
++ + + ++
Sbjct: 549 ASFCSTIGLL 558
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G A+ Y+ L + +KF A ++ ++ P++VT ILI +C V
Sbjct: 333 REKGIAYGVITYNX--GGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYN---ILINGFCDV 387
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSF 175
+ A+ F K + + + L++ + +N+ A L+ + P + ++
Sbjct: 388 GKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTY 447
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I+++ + + + + E + M + G+ DV S +I N+ + +L +
Sbjct: 448 XILIDAFARLNYTKKTCEMHSL-MEKSGLVSDV-XHSVLIHGLCMNGNMKEASKLLKSLG 505
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ +E + +YN +IH K A+ L M + PNV ++ S I LC+ K
Sbjct: 506 ELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFCSTIGLLCRDEKWQ 565
Query: 296 EARQAFDEMLQ 306
EA + L
Sbjct: 566 EAELLLGQFLS 576
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 144/277 (51%), Gaps = 8/277 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC Q+A L+ D P + S+ ++NG+ G S +A + EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE-GDSDKAYSTYHEM 222
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RGI DVV+++ II+ KA+ + K + + + M + G+ D YN+++H
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+AI +K M GV P+VVTY+ L+ LCK + EAR+ FD M +RG+ P I TY
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 320 LDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L T E+ GLL+ M + G P + + +LI ++ + V++++ + G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ +Y A+I L +G++E+A Y+ +M ++ L P
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 40/320 (12%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V +A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI-- 433
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++G C R AE + +EM RGIC + + F+ II + K
Sbjct: 434 DEGLSPGNI-VYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LF+ M R+G++ + YN +I+ + +A+ L+ M G+ PN VTY++
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
LI CK ++++A F EM G+SP I TY+ L GL ++ R +
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ---------GLFQTRRTAAAK- 601
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+++ I+E+G + S+Y ++H L N ++A Q +
Sbjct: 602 ----------------------ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 404 MEMKEKQLLPEPKTDELLQD 423
+ L E +T ++ D
Sbjct: 640 QNLCLMDLKLEARTFNIMID 659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 168/400 (42%), Gaps = 78/400 (19%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+ I + D +A + ++ + + +++ALC+
Sbjct: 188 RGGGSPPDVVSYTTV---INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P + ++N IL+G+C +++
Sbjct: 245 QAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI D V++ +I A A V A+ + M ++G+ PN VTY ++I LCK+ +++
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVF------------------- 330
+A F++M+ G+SP Y++ + + T EE+
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 331 -------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L E M ++G +P TY LI + + K+ + + G
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y+ LI+ ++E+A + EM+ + P+ T
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 10/381 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y +I IL K + + A ++M P + +L I C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL---IHGLCTC 454
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ RA + F ++ + C+ V ++E L + V P N +
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP-NVIT 513
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++NG+C + G EA ++ M G+ + V++S +I+ Y K + L LF +M
Sbjct: 514 YNTLINGYC-LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ D YN ++ L + R A L + E G + TYN ++ LCK +
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
D+A Q F + + RT++ +D +++ G +E L + G P TY ++
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + +++ + +NG D ++ L G++ A Y + EK
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752
Query: 412 LPEPKTDELLQDWSYNKQFVE 432
E T L D ++ E
Sbjct: 753 SLEASTASLFIDLLSGGKYQE 773
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL- 265
D+ ++ +I C +A L + + G D + ++ L + DA+ +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD- 321
++ M E G PNV +YN L+K LC + EA + M G P + +Y ++
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 322 IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G+ + + M G P TY +I + + +V N + +NG PD
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H +G+ +EA + +M+ + P+ T LL D+
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSLIK 286
+FD++ R G N + +A+ A+S M G V P++ TY LI
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQ 342
C+A +LD A ++++G + L + RT + + +L M ++GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN---GNGPDRSSYTALIHALFLNGKLEEA 399
P +Y +L+K + ++ + ++++ G+ PD SYT +I+ F G ++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ Y EM ++ +LP+ T
Sbjct: 216 YSTYHEMLDRGILPDVVT 233
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 13/382 (3%)
Query: 60 GYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G A + Y+ +I A+ G+ + + A +++ +MRG GP++VT TL+ R V
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKE-ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 203
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
R + + F +++ +C+ ++DA + + + P + S+N
Sbjct: 204 AERLVGMML---DGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP-DGVSYN 259
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+C G S EA V+ EM+Q+GI DVV+F+ +I KA NL + L QM+
Sbjct: 260 TLVGGYCKA-GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ + + A+I K + DA+ ++ M + + P+VV YN+LI C ++DE
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDE 378
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIK 353
AR+ EM +G+ P + TY + F L + M + G P TY LI+
Sbjct: 379 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + ++ + + G PD +YT+LI G +E A + +M + +LP
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498
Query: 414 EPKT-DELLQDWSYNKQFVERQ 434
+ T L+ S + + +E Q
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQ 520
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 11/382 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY S Y+ ++ L +A D M P++ T ILIR C
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYN---ILIRALCGRGHR 166
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A++ + + + L++A R V AE L M + + P N +FN
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKP-NLVTFNS 225
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C G +A +V+ EM + G+ D VS++ ++ Y KA H+ L +F +M +
Sbjct: 226 MVNGMCKA-GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK 284
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D + ++IH + K ++ A++L++ M E+G+ N VT+ +LI CK LD+A
Sbjct: 285 GIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 344
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
A M Q I P++ Y+A ++ ++ +E LL M G +P TY +I
Sbjct: 345 LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + F++ ++ E G PD +Y++LI L +L +AH + M + L P+
Sbjct: 405 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPD 464
Query: 415 PKTDELLQDWSYNKQFVERQIA 436
T L D + VER ++
Sbjct: 465 EFTYTSLIDGHCKEGNVERALS 486
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 171/430 (39%), Gaps = 79/430 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++M+ + K K + A + DEM P V+ TL + YC A++ F
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTL---VGGYCKAGCSHEALSVFA 279
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---------------------FCNKD 166
+ + F L+ +C+ N++ A L+ FC K
Sbjct: 280 EMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339
Query: 167 VF----------------PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
P + +N ++NG+C ++G EA + EM +G+ DVV+
Sbjct: 340 FLDDALLAVRGMRQCRIKP-SVVCYNALINGYC-MVGRMDEARELLHEMEAKGLKPDVVT 397
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S IIS Y K + H L QM G+ D Y+++I L + + + DA L K+M
Sbjct: 398 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI 457
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+ G+ P+ TY SLI CK ++ A D+M++ G+ P + TY ++
Sbjct: 458 KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN--------- 508
Query: 331 GLLESMRKMGCQ------------PTNDTY---------------IMLIKKFSRWRQFGN 363
GL +S R M Q P N Y + L+K F
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP-EPKTDELLQ 422
KV+ + + D S Y+ LIH G + +A ++ +M ++ P T L++
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628
Query: 423 DWSYNKQFVE 432
N VE
Sbjct: 629 GLFENGMVVE 638
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G V++++ ++ S A +L R FD M G+ + YN +I AL K+A
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
+S+++ M G PNVVTYN+L+ +A ++D A + ML G+ P + T+++ ++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ + G E+ + + M + G P +Y L+ + + V+ E+++ G PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
++T+LIH + G LE A +M+E+ L T L D K F++ + +++
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 440 AH-----QP-----QSGQNTRVISKKSDQDREFLQQPETR 469
+P + N + + D+ RE L + E +
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 128/335 (38%), Gaps = 66/335 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I V + D A L+ EM P +VT T++ + C H +AF
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH------SAFE 416
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI--ILNGW 182
++ + D + L+ LC K + DA H++F N F +++G
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA-HVLFKNMIKLGLQPDEFTYTSLIDGH 475
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR-------------------- 222
C G+ A + +M + G+ DVV++S +I+ SK+
Sbjct: 476 CKE-GNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPA 534
Query: 223 --------------NLHKVLRLFDQ--MKRMGIECDR--------------KVYNAVIHA 252
L VL L MK + E D+ VY+ +IH
Sbjct: 535 NTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 594
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
+ V A+S K M ++G APN + SLI+ L + + EA Q ++L
Sbjct: 595 HCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLAD 654
Query: 313 IRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPT 344
A +D+ + G + V +L M K G P+
Sbjct: 655 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 174/362 (48%), Gaps = 25/362 (6%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A + Y T+I+ KV + D A + DEM GE P
Sbjct: 198 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEA 257
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDA 157
V L I YC D G+ A R A+ + + L+ AL +A
Sbjct: 258 VMYNAL---IGGYC---DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 311
Query: 158 EHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
L+ DVF ++NI++NG C G+ ++A ++ MS+RG+ VV++
Sbjct: 312 YELVEEMGGKGLALDVF-----TYNILINGHCKE-GNVKKALEIFENMSRRGVRATVVTY 365
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I SK + + +LFD+ R GI D +YNA+I++ + + A +M ME+
Sbjct: 366 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 425
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG 331
K +AP+ VTYN+L++ LC ++DEAR+ DEM +RGI P + TY+ + +V
Sbjct: 426 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485
Query: 332 LL---ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L M G PT TY LI+ + Q + + E+ ENG PD S+Y +LI
Sbjct: 486 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 545
Query: 389 AL 390
L
Sbjct: 546 GL 547
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y+ ++ L + A+ L++EM G + T ILI +C
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN---ILINGHCKEG 341
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V +A+ F R + + L+ AL + VQ+ + L + + P + +
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP-DLVLY 400
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N + G+ A + EM ++ I D V+++ ++ + + +L D+M
Sbjct: 401 NALINSH-STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ GI+ D YN +I + VKDA+ + M KG P ++TYN+LI+ LCK + D
Sbjct: 460 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 519
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM++ GI+P TY + ++ + T +E
Sbjct: 520 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 45/247 (18%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T S + +L+ S A ++ +M + + +F+ ++ A +
Sbjct: 119 LPISTASLHPLLSAL-----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARA 173
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLI 285
L L QM R + YN VI ++GR V+ A+ +M+ M E+G +APN TY ++I
Sbjct: 174 LELLRQMPR----PNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAPNQYTYGTVI 228
Query: 286 KPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPT 344
CK ++DEA + FDEML +G + P Y+A
Sbjct: 229 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA-------------------------- 262
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
LI + + + + E G ++Y L+HALF++G+ EA++
Sbjct: 263 ------LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316
Query: 405 EMKEKQL 411
EM K L
Sbjct: 317 EMGGKGL 323
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 5/324 (1%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E G T T IL+ D+ + K A + + +++A CR NV
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253
Query: 155 QDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
+ A + C + N +++ +++NG+C I G AE + +M RG+ ++ + F+
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKI-GQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + + L++ M++MGIE D YN + L + + +A +L+ M EKG
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVF 330
V PN VTY +LI CK + EAR+ F EM +G P++ TY+ +D I+ G E
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ M K G P TY L+ + K++ E+ G P+ +YTALI L
Sbjct: 433 RFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGL 492
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPE 414
G+ EEA Q Y +M + L P+
Sbjct: 493 AKEGRSEEAFQLYDDMLKAGLTPD 516
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + R Y +I K+ + + A L+ +M+G G + + T+ I YC
Sbjct: 266 NGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM---IDGYCRQGM 322
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V A+ A ++ + + + L LCR + +A+ L+ K V P N ++
Sbjct: 323 VDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP-NYVTYT 381
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G EA R++ EM+ +G VV+++ ++ Y K ++ + R +M++
Sbjct: 382 TLISIHCKE-GDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEK 440
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y +++H V A+ L + M+ +G PNVV Y +LI L K + +E
Sbjct: 441 KGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEE 500
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D+ML+ G++P Y A + + T
Sbjct: 501 AFQLYDDMLKAGLTPDDSLYSALVGSLHT 529
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 4/247 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ I+++ + G + E V EM + + DV ++ +I+ Y +A N+ + +FD+
Sbjct: 204 TYTILVDSL-STAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDE 262
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
GIE + + Y +I+ K ++ A L+ M+ +GV N + +N++I C+
Sbjct: 263 CVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGM 322
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+D A + M + GI + TY+ L + E LL M + G P TY
Sbjct: 323 VDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTT 382
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + +++ E++ G P +Y ++ G + EA ++ EM++K
Sbjct: 383 LISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442
Query: 411 LLPEPKT 417
L+P+ T
Sbjct: 443 LVPDVYT 449
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 42/304 (13%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C V P + +++++G+C G +A + EM + G+ + + ++ ++ CY + +
Sbjct: 126 CPGSVSPL---AASVVVDGFCKS-GRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRK 181
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ +V L + M+ GIE Y ++ +L+ + +++ M+ K VA +V Y
Sbjct: 182 DDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM 339
++I C+A + A + FDE + GI P RTY ++ + G E LL M+
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR 301
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKV---------------WNEIS------------ 372
G + +I + R N KV +N ++
Sbjct: 302 GVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEA 361
Query: 373 --------ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
E G P+ +YT LI G + EA + + EM K +P T ++ D
Sbjct: 362 KTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDG 421
Query: 425 SYNK 428
K
Sbjct: 422 YIKK 425
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVT---YNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
G+L A L +++ G P V+ + ++ CK+ ++D+AR DEM + G+
Sbjct: 110 GQLADAAAILTRAL---GSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLN 166
Query: 313 IRTYHAFLDI-IRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
Y++ LD +R ++ V LLE M G + T TY +L+ S V V +
Sbjct: 167 ALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVD 226
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ D YTA+I+A G + A + + E + P +T
Sbjct: 227 EMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERT 274
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 189/411 (45%), Gaps = 50/411 (12%)
Query: 48 AFTFFLWAGKQSGYAH-STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
+ FF WA + Y H S Y+ MI + GKVR+FD AW LID M+ S+ +T
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISI---ETF 189
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFC 163
ILIRRY G A A + + R + + D F ++S L R + +A+
Sbjct: 190 TILIRRYVR---AGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC------ 217
KD F + + ++ GWC G EAE+V+ EM GI +V ++S +I
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCR-AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 218 -----------------------------YSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ KA KVL++++QMK++G E D YN
Sbjct: 306 ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNF 365
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I A + +++A+ ++ +M +K N T+N++ + + K R ++ A + + +M++
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P TY+ + + ++ + V + + M +P +TY +L+ F + N +
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 366 KVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
K++ E + E P S Y ++ L G+L++ + +M +K L+ P
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++F I++ + G + EA + M G D ++FS +IS S+ R + FD
Sbjct: 187 ETFTILIRRYVRA-GLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFD 245
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+K E D VY ++ + + +A + K M+ G+ PNV TY+ +I LC+
Sbjct: 246 SLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYI 349
++ A F +ML G +P T++ + + ++ G E+V + M+K+GC+P TY
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI+ R N KV N + + + S++ + + + AH+ Y +M E
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 410 QLLPEPKTDELL 421
+ P T +L
Sbjct: 425 KCEPNTVTYNIL 436
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I K R L D MK +E + + +I + L +A+ ME+ G
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVF 330
P+ + ++ +I L + R+ EA+ FD + R P + Y + R GE E
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ + M+ G +P TY ++I R Q V+ ++ ++G P+ ++ L+
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL------KAHQPQ 444
G+ E+ Q Y +MK+ P+ T L + + +E + L K
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 445 SGQNT--RVISKKSD 457
S NT R I KK D
Sbjct: 396 STFNTIFRYIEKKRD 410
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 184/388 (47%), Gaps = 16/388 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ +++ +L+ + + A ++ +S ++ + Y+ M+ + + +F+ ++D
Sbjct: 175 NARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLD 234
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R I + L+SA
Sbjct: 235 LMRERGCEPDLVSFNTL-INARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACS 293
Query: 150 RYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + +C D++ +N I + G C G S +AE+++ E+ +G
Sbjct: 294 RESNLEEAVKVFDDMEAHYCQPDLWTYNAM---ISVYGRC---GFSGKAEQLFKELESKG 347
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+++ ++ +++ N+ KV + ++M +MG D YN +IH K A+
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L + M+ G P+ +TY LI L KA K+ EA EML G+ PT+RTY A +
Sbjct: 408 QLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGY 467
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
R G+ E + MR+ G +P Y +++ F R+ + ++ E+ +G PD
Sbjct: 468 ARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDP 527
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ Y A++ L K+E+ + +M+E
Sbjct: 528 TVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 161/386 (41%), Gaps = 49/386 (12%)
Query: 37 VLSWV-RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
V+ WV + +W+ A F W + Y+ + R T++A+LGK + A
Sbjct: 147 VVKWVGQENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEALA----------- 195
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
+ I IR V + + NA G+ + R+ VQ
Sbjct: 196 ----------VEIFIRAESTVDNTVQVYNAM---------------MGVYARTGRFNKVQ 230
Query: 156 DAEHLM---FCNKDVFPFNTKSFNIILNGWCNIIG-SSREAERVWMEMSQRGICYDVVSF 211
LM C D+ FNT ++N + A + E+ + G+ D++++
Sbjct: 231 GMLDLMRERGCEPDLVSFNT-----LINARLKAGAMTPNVAIELLNEVRRSGLRPDIITY 285
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +IS S+ NL + +++FD M+ + D YNA+I + A L K +E
Sbjct: 286 NTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELES 345
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEE-- 328
KG P+ VTYNSL+ + +D+ ++ +EM+Q G TY+ + + + G+
Sbjct: 346 KGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGL 405
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L M+ G P TY +LI + + V +E+ G P +Y+ALI
Sbjct: 406 ALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALIC 465
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPE 414
G+ EA + + M+ + P+
Sbjct: 466 GYARAGQRLEAEETFDCMRRSGIRPD 491
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+L A R N+ +A+ + K F T I+ G R+ E + EM + G
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAG 905
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D+ ++ ++ Y+ + K ++++ ++K G++ D YN +I + ++
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGC 965
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
SLM M G+ P + TY SLI K + + +A + F+E+L +G YH + I
Sbjct: 966 SLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIY 1025
Query: 324 RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
R + LL M+ G +PT T +L+ + Q KV + E G
Sbjct: 1026 RNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLST 1085
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y+++I A N Q +EMK++ L P+
Sbjct: 1086 LPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPD 1119
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISLMKS 268
++ ++ Y++ +KV + D M+ G E D +N +I+A L G + + AI L+
Sbjct: 213 YNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNE 272
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG- 326
+ G+ P+++TYN+LI + L+EA + FD+M P + TY+A + + R G
Sbjct: 273 VRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGF 332
Query: 327 ----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E++F LES G P TY L+ F+R V ++ NE+ + G D +
Sbjct: 333 SGKAEQLFKELESK---GYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMT 389
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y +IH G+ A Q Y +MK P+ T +L D
Sbjct: 390 YNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLID 430
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G E V E+ G S I+ +++ N+ + +++ MK G
Sbjct: 817 VDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMH 876
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y +I L KG+ V+D +++ MEE G P++ +NS+++ + Q + +
Sbjct: 877 LYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRI 936
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G+ P TY+ + + EE L+ MR++G +P DTY LI F + +
Sbjct: 937 KEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLV 996
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ +++ E+ G+ DRS Y ++ +G +A + MK+ + P T LL
Sbjct: 997 VDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLL 1056
Query: 422 Q---DWSYNKQFVERQIASLK 439
S Q E+ + +LK
Sbjct: 1057 MVSYGSSGQPQEAEKVLTNLK 1077
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 41/255 (16%)
Query: 203 GICYDVVSFS-CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G+ +D +S +I Y K + K L +++ DRKV+NA+I A A +
Sbjct: 729 GMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQ 788
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPL--------------------------------- 288
A ++ +M G +P V + N L++ L
Sbjct: 789 ARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILD 848
Query: 289 --CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQP 343
+ + EA++ + M G PT+ Y + ++ G+ +V ++ M + G +P
Sbjct: 849 AFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRP 908
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ +++ ++ F +++ I E+G PD +Y LI + + EE
Sbjct: 909 DLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLM 968
Query: 404 MEMKEKQLLPEPKTD 418
EM+ L EPK D
Sbjct: 969 HEMRRIGL--EPKLD 981
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 136/332 (40%), Gaps = 23/332 (6%)
Query: 21 KIEECGIKVSSE---LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+I++ G ++S L+ + + V N EA + K +GY + Y MI +L K
Sbjct: 830 EIQDMGFQISKSSILLILDAFARVSNIAEAKKIY--QGMKAAGYFPTMHLYRIMIGLLCK 887
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
++ A++ EM P L ++L R Y + D + + + K
Sbjct: 888 GKRVRDVEAMVTEMEEAGFRPDLSIWNSML---RLYTGIDDFRKTVQIYQRIKEDGLQPD 944
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS------SRE 191
+ + L+ CR ++ LM + + L+ + ++I + +
Sbjct: 945 EDTYNTLIVMYCRDHRPEEGCSLMHEMRRI------GLEPKLDTYKSLIAAFGKQQLVVD 998
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE ++ E+ +G D + ++ Y + N K +L MK G+E + ++
Sbjct: 999 AEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMV 1058
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ ++A ++ +++E G++ + + Y+S+I K + Q EM + G+ P
Sbjct: 1059 SYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEP 1118
Query: 312 TIRTYHAFLDIIRTGE---EVFGLLESMRKMG 340
R + F+ E + LL++++ G
Sbjct: 1119 DHRIWTCFIRAASLSEHTHDAILLLQALQDSG 1150
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 15/210 (7%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNAVIHALAKGRLVKDAISLM 266
V S + C KA+ L L+ ++ + +Y ++I + +A +
Sbjct: 630 VAEASIVTLC--KAKQLDAALKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIF 687
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--------PTIRTYHA 318
M GV P+ Y S++ CK + A D G+ I TY
Sbjct: 688 SDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGK 747
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L + + E + G ++R+ + LI+ ++ + V+N + +G P
Sbjct: 748 -LKLWQKAESLVG---NLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSP 803
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
S L+ AL ++G+LEE + E+++
Sbjct: 804 TVDSINGLLQALIVDGRLEELYVVTQEIQD 833
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 172/379 (45%), Gaps = 55/379 (14%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKV-RKFDTAWALIDEMRGGETGPSLVTKQ 104
+ A FF WAG+Q GY H Y+ ++ IL K +F T D + G P+LVT +
Sbjct: 8 DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG-CSPNLVTFK 66
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
ILIR C RA+ A F A + F L+ L + N A L
Sbjct: 67 ---ILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM 123
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG--ICYDVVSFSCIIS 216
N D+F +NT +++G C G+ +A + EM +RG D+V+++ +I+
Sbjct: 124 ESSRVNPDIFTYNT-----VISGLCK-SGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177
Query: 217 C-YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K ++ + L + D MK G D YN++IHAL V +A ++K+M +
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CS 234
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES 335
P++VT+N+L+ CKA L A + +EM + I P D+I
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP---------DVI------------ 273
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
TY +L+ R Q F + EI G PD +YT+L+ L +G+
Sbjct: 274 -----------TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 322
Query: 396 LEEAHQYYMEMKEKQLLPE 414
+EEAH+ EM +++L E
Sbjct: 323 IEEAHKLVKEMSAREILAE 341
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 162/361 (44%), Gaps = 56/361 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+T+I+ L K + A L++EM RGG++ P +VT TL INA
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTL----------------INA 178
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-NTKSFNIILNGWCN 184
+C+ +V++A ++ K P + ++N I++ C
Sbjct: 179 ---------------------GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALC- 216
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G EA + MS D+V+F+ ++ + KA L + L + ++M R I D
Sbjct: 217 VAGRVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 273
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE-------- 296
Y +++ L + V+ A L++ + +G P+V+ Y SL+ LCK+ +++E
Sbjct: 274 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 333
Query: 297 -ARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
AR+ EM+ + P + TY+ L +I+ G + L+ + G P TY LI
Sbjct: 334 SAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLI 393
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + +E++ G P+ + +++ L G++++A +EM K+
Sbjct: 394 DGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 453
Query: 413 P 413
P
Sbjct: 454 P 454
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+D + + S+N +L+ G +V+ ++ G ++V+F +I KA
Sbjct: 20 QDGYKHDVHSYNHLLDILVKS-GHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ L + + D ++N +IH L K A+ L ++ME V P++ TYN++
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 285 IKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD--IIRTG--EEVFGLLESMRK 338
I LCK+ L++AR+ +EM++RG +P I TY+ ++ I + G EE +L+ M+
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P TY +I G V + + PD ++ L+ G L
Sbjct: 199 AGPAPDVITYNSIIHALCVA---GRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPR 255
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A + EM + +LP+ T +L
Sbjct: 256 ALEVLEEMCRENILPDVITYTIL 278
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 134/324 (41%), Gaps = 26/324 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ K A +++EM P ++T IL+ C V V A
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT---ILVNGLCRVGQVQVAFYLLE 296
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------------MFCNKDVFPFNTKSF 175
R + + + L+ LC+ +++A L M V P T +
Sbjct: 297 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT--Y 354
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+L G GS +A + ++ RG DVV+++ +I KA + + L D+M
Sbjct: 355 NIVLGGLIKD-GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G + +V+ L + V DA SL+ M K APNVV Y SLI LCK+ ++D
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A D M +G++ Y + +I G E + + M G P T
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTS---- 529
Query: 353 KKFSRWRQFGNVFKVWNEISENGN 376
K +VF+ W + EN +
Sbjct: 530 KTLEEAAMSNSVFE-WTNLEENAS 552
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L +V + A L+ + G P++V T+ I C V
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTI---IDSMCKDKLV 214
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + + + L+S C ++ A L + ++ P N +F+I
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP-NVYTFSI 273
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G+C G REA+ V M ++ + DVV+++ ++ Y + ++K LF+ M +
Sbjct: 274 LIDGFCKE-GKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR 332
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y+ +I+ K ++V +A+ L + M K + PNVVTYNSL+ LCK+ + A
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKK 354
+ DEM RG I TY++ LD I V LL +++ G QP TY +LI
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + KV+ ++ G P+ +YT+LI+ G +E +MK+ +P
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512
Query: 415 PKTDELL 421
T E+L
Sbjct: 513 AITYEIL 519
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 176/350 (50%), Gaps = 10/350 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I + K + + A+ L EM P +VT +L I +C V + A++ F
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL---ISGFCVVGKLKYAVDLFN 257
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ C+ V++A++++ K+V + ++N +++G+C +
Sbjct: 258 RMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV-KLDVVTYNSLMDGYC-L 315
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A+ ++ M+QRG+ DV S+S +I+ + K + + + ++LF++M I +
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN+++ L K A+ L+ M ++G N++TYNS++ +CK +D+A ++
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++GI P I TY ++ + + G ++ + E + G P TY LI F F
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFD 495
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ +++ +NG P+ +Y LIH+LF + ++A + EM + LL
Sbjct: 496 EGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 39/286 (13%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++N + + G + + V+ ++ ++G D V+F+ +I +HK L D++
Sbjct: 97 NLLMNCFSQL-GHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVV 155
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G + D+ Y +I+ L + K A+ L++ ++ K V PNVV Y+++I +CK + ++
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVN 215
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
+A + EM+ + ISP + TY + + ++ + L M P T+ +LI
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 353 KKF---SRWRQFGNVFKV--------------------------------WNEISENGNG 377
F + R+ NV V +N +++ G
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD SY+ +I+ ++EA + + EM KQ+ P T L D
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+ F I+ KA+ L L QM+ GI+ D N +++ ++ +K + S+
Sbjct: 59 IEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAK 118
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE 327
+ +KG P+ VT+ LIK LC ++ +A D+++ +G +Y ++ + R GE
Sbjct: 119 ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGE 178
Query: 328 E--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL + +P Y +I + + + F ++ E+ PD +Y++
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI + GKL+ A + M + P T +L D
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 10/255 (3%)
Query: 185 IIGSSREAER--VWMEMSQR----GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
I+GS +A++ + +SQ+ GI D ++ + +++C+S+ ++ +F ++ + G
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D + +I L V A+ + +G + V+Y +LI LC+ + A
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
Q + + + P + Y +D + + + F L M P TY LI F
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ ++N + + P+ +++ LI GK+ EA M +K + +
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 416 KT-DELLQDWSYNKQ 429
T + L+ + KQ
Sbjct: 304 VTYNSLMDGYCLVKQ 318
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 12/355 (3%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ M+ K +FD A +I EM P +VT +LI DV AI +
Sbjct: 161 NIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHN---VLIDARFRAGDVDAAIALVDS 217
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD---VFPFNTKSFNIILNGWCNI 185
GI + +L LC+++ A+ + F D V P + +SFNI++ G+C +
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV-FRTMDQCSVAP-DVRSFNILIGGFCRV 275
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +EA + + EM R + DVVSFSC+I +S+ + +MK +G+ D +
Sbjct: 276 -GEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI + + +A+ + M G P+VVTYN+L+ LCK +L +A + +EM
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+RG++P + T+ + R G E L +++ + +P TY LI R
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++W+++ P+ +Y+ LI + G++E+A + EM +K LP +T
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRT 509
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 65/409 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q A R ++ +I +V + A EM+ P +V+ L+ L R +
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314
Query: 118 DVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA-----EHLMF-CNKDV 167
G AY R +G+ + ++ CR ++ +A E + F C DV
Sbjct: 315 HAG-------AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDV 367
Query: 168 FPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+NT +LNG C R +AE++ EM +RG+ D+ +F+ +I Y + N
Sbjct: 368 VTYNT-----LLNGLCK---QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALA-KGRL-------------------------- 258
L+LFD + R + D YN++I + KG L
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
Query: 259 --------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
V+DA + M +KG PN+ TYNS+IK C++ + + +Q +M Q +
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539
Query: 311 PTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + T++ + E + F + M K +P TY M+I FS + +V
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + ++G PDR +Y +LI+ G ++A Q + EM + P+ K
Sbjct: 600 FKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 148/361 (40%), Gaps = 44/361 (12%)
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY---KNVQDAEHL 160
Q +LIR Y A AF + V LL+ L R Q+A L
Sbjct: 88 QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRL 147
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ + N + NI+++ +C + A+ V EM +R + DVV+ + +I +
Sbjct: 148 VLSSDS--EVNAYTLNIMVHSYCKTL-EFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A ++ + L D M G++ YN+V+ L K R A + ++M++ VAP+V +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE------------ 327
+N LI C+ ++ EA + + EM R ++P + ++ + + R GE
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 328 -------------------------EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
E + + M GC P TY L+ + +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ K+ NE+ E G PD ++T LIH G E A Q + + ++L P+ T L
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 423 D 423
D
Sbjct: 445 D 445
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 187/416 (44%), Gaps = 53/416 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K++KFD +L ++M+ +L T ILI +C + A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN---ILINCFCRRSQISLAL 65
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F T +
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + M QRG ++V++ +++ K ++ L ++M+
Sbjct: 126 FLHN------KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
IE D ++N +I +L K R V DA++L K ME KG+ PNVVTY+SLI LC + +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE------------------EVFG------- 331
Q +M+++ I+P + T++A +D ++ G+ ++F
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 332 ------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ E M C P DTY LIK F + ++ + +++ E+S G D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+YT LI LF +G + A + + +M + P+ T +L D N +E+ +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 172/419 (41%), Gaps = 49/419 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y ++ L K D A+ L+++M + +V T+ I C
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 199
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A+N F + + + L+S LC Y DA L+ K + P N +F
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 258
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++ + G EAE++ +M +R I D+ +++ +I+ + L K ++F+ M
Sbjct: 259 NALIDAFVKE-GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D YN +I K + V+D L + M +G+ + VTY +LI+ L D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-----EVFG----------------LL 333
A++ F +M+ G+ P I TY LD + G+ EVF ++
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 334 ESMRKMG----------------CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
E M K G +P TY +I R + + ++ E+G
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQFVE 432
PD +Y LI A +G + + EM+ + + + T +L D +K F++
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 556
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 163/356 (45%), Gaps = 39/356 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D M P+LVT +++ C
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRG 164
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A N + K + F ++ +LC+Y++V DA +L K + P N ++
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP-NVVTY 223
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ C+ G +A ++ +M ++ I ++V+F+ +I + K + +L D M
Sbjct: 224 SSLISCLCSY-GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D YN++I+ + A + + M K P++ TYN+LIK CK+++++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + F EM RG+ G+ V TY LI+
Sbjct: 343 DGTELFREMSHRGL---------------VGDTV-----------------TYTTLIQGL 370
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
N KV+ ++ +G PD +Y+ L+ L NGKLE+A + + M++ ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGL 332
P++ +N L+ + K +K D ++M + GIS + TY+ ++ ++ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L M K+G +P+ T L+ + ++ + + +++ E G PD ++T LIH LFL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT 417
+ K EA M ++ P T
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVT 152
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 17/367 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SGY YH +I L K+ K D + ++ EM PS+ Q L+R
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSM---QAYSSLVRALAKAR 129
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFN 176
V A + F R F L+ LC+ V+DA E K N +N
Sbjct: 130 RVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++L+G C+ G +A ++ EM DVV+++ ++ KAR + + +LF+ M+
Sbjct: 190 VLLHGLCSS-GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + ++ +IH L + ++ A+ + SM E G PN TY +LI LC+A K+ +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM--------GCQPTNDTY 348
AR+ F++M Q I P Y++ + G G ++ K+ G QPT T+
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLI----AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI F + + G ++ E+ G D +Y LI L KL+EA + Y +M+E
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424
Query: 409 KQLLPEP 415
K+ L +P
Sbjct: 425 KKFLLDP 431
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 11/281 (3%)
Query: 141 FQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
F G++ R N++ A +H++ + + + S++I+++G I G E+ ++
Sbjct: 48 FNGVMQGFARSNNMEKAREVYQHMV---ESGYKPDNVSYHILIHGLAKI-GKLDESLKIL 103
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM RG + ++S ++ +KAR + LFD+M R G DR ++ +I L +
Sbjct: 104 SEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQA 163
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
VKDA K M + G PNV YN L+ LC + +L++A F EM SP + TY
Sbjct: 164 GKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTY 223
Query: 317 HAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ LD + R EE L E+MR G P T+ LI R + +V+ + E
Sbjct: 224 NTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 283
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P++ +YT LI L K+ +A + + +M + + P+
Sbjct: 284 AGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 9/258 (3%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
CN DVF +FN ++ G+ + +A V+ M + G D VS+ +I +K
Sbjct: 41 CNPDVF-----AFNGVMQGFARS-NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 94
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L + L++ +M G + Y++++ ALAK R V A SL M G P+ + +
Sbjct: 95 KLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFY 154
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKM 339
LI LC+A K+ +A + F +M + G P + Y+ L + +G E+ L M+
Sbjct: 155 ELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH 214
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
C P TY L+ + R+ K++ + G P+ +++ LIH L G+LE+A
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKA 274
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ + M E P T
Sbjct: 275 LEVFGSMLEAGCKPNKYT 292
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E+ +V EM G DV +F+ ++ ++++ N+ K ++ M G + D Y+ +I
Sbjct: 28 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 87
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H LAK + +++ ++ M +G P++ Y+SL++ L KAR++D A FDEM++ G
Sbjct: 88 HGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH 147
Query: 311 PT-IRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + Y L + + G ++ + M K GCQP Y +L+ Q +
Sbjct: 148 PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ E+ + PD +Y L+ A+ ++EE + + M+ +P
Sbjct: 208 FAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP 253
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + I +V ++S II K + ++ ++M G D +N V+ A+
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++ A + + M E G P+ V+Y+ LI L K KLDE+ + EM+ RG +P+++ Y +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 319 FLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + R + L + M + G P + LI + + + + + ++ ++G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
P+ Y L+H L +G+LE+A+ + EMK P+ T L D + VE
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ + K R+ + L + MR P+++T TL I C ++ +A+ F
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL---IHGLCRTGELEKALEVFG 279
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
+ + L+S LCR + V A L + P + ++N ++ G+C
Sbjct: 280 SMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR- 338
Query: 187 GSSREAERVWMEMSQ-RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS EAE+++ EMS G+ +V+F+ +I + K L + L +M G+ D
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I L++ + +A+ + K M EK + V+ S + LCK +D+A F+
Sbjct: 399 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 458
Query: 306 QRGISPTIRTY 316
+ G P T+
Sbjct: 459 KSGAVPNPETF 469
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 12/401 (2%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S +R ++E+ + +VS VL ++ D + A FF+WAG + G+ HST + + L
Sbjct: 78 SNIRERLEQWRGTLQPAVVSRVLQRLK-DPQTAIVFFVWAGDR-GFKHSTFTRNCFLQTL 135
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ D A+ + M P T ++I+ C ++ + +A K F
Sbjct: 136 LENGSSDRIPAMFERMLDAGYAPDSYTYH---LVIKSLCQMNQIDKAFTMLDKAKVRGFK 192
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + L A C+ ++DA + +++ + ++N I++G C A
Sbjct: 193 PEVSVYTILTRAFCKTGRLKDALEIF---RNIPSPDAIAYNAIIHGHCRK-NDCDGALEF 248
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM++R + DV +++ +I KA K + +M G+ D +N+++ L K
Sbjct: 249 LKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCK 308
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ A SL+ M E+ P+ TYN+LI LCK + +D A+ DE + G P + T
Sbjct: 309 AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVT 368
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y D + + G +E F L++ M GC P TY LI + + +++ +
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+G PD +YT ++ L G+L++A + M ++ P
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 178/386 (46%), Gaps = 25/386 (6%)
Query: 29 VSSELVSEVLSWV--------RNDWEAAFTFFL-WAGKQSGYAHSTREYHTMIAILGKVR 79
VSS V +V+++ R + AF +GK G + Y+T+I L K
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK--GCTPNLVTYNTLIDGLCKAS 415
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K + A+ L++ + P +VT I++ C + +A+ + +
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYT---IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+ LCR V +A H+ +KD + ++ ++NG+C SSR E +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA-DALAYVSLVNGYCK---SSRTKEAQKV 528
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
RG Y + ++ ++ Y K L ++ +F+ M G + K YN V+ L K
Sbjct: 529 VDGIRGTPY-IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 587
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A ++SM G P+VV+YN +I L KA K EARQ D+M+Q GI P TY+
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 647
Query: 318 AFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ E + G+L++M K G P N TY LI S+ + G+ +++ +E+ N
Sbjct: 648 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 707
Query: 375 GNGPDR-SSYTALIHALFLNGKLEEA 399
G ++Y +I L G L++A
Sbjct: 708 GCVVSACTTYNTIIDRLCKEGCLKQA 733
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 182/428 (42%), Gaps = 46/428 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ND + A F L + A Y+ +I L K K D A ++ EM P V
Sbjct: 239 KNDCDGALEF-LKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T +++ C RA + + L+S LC+ +NV A+ L+
Sbjct: 298 TFNSIM---DGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F + P + +++I+ +G C G EA + EMS +G ++V+++ +I
Sbjct: 355 DEFVSSGFVP-DVVTYSILADGLCKR-GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC 412
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNV 278
KA K L + + G D Y ++ L K GRL K A+ +++ M ++G P+V
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK-ALKMVEGMLKRGCTPSV 471
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQR------------------------------G 308
+TY +L++ LC+ ++DEA F EM+ + G
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 531
Query: 309 I--SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
I +P I Y+A +D + G +E+ + E M GC P TY +++ + +
Sbjct: 532 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQ 422
F + G PD SY +I LF K +EA Q +M + + P+ T + L+
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651
Query: 423 DWSYNKQF 430
+ ++F
Sbjct: 652 QFCKEERF 659
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 156/362 (43%), Gaps = 50/362 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + +G Y+ +I L K K A ++D+M P VT TL+
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA--- 651
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
F +RF AVGI KN+ A V P N
Sbjct: 652 -------------QFCKEERFDDAVGI------------LKNMIKA--------GVDPDN 678
Query: 172 TKSFNIILNGW--CNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVL 228
++N +++G N +G + E + EM + G + +++ II K L + L
Sbjct: 679 V-TYNTLISGLSQTNRLGDAYE---LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 734
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D M G+E + YN I L K + +A SL+ M+ + V+Y ++I L
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGL 791
Query: 289 CKARKLDEARQAFDEMLQ-RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
CKA +LD A + EM+ +G+ T T++ +D + +E LL M + GC P+
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY M+I + + +++++E++ G SYT LI+ L G+ +EA Q
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911
Query: 405 EM 406
EM
Sbjct: 912 EM 913
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 13/291 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q+G Y+T++A K +FD A ++ M P VT TL+ + + +
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ---TN 692
Query: 118 DVGRAINAFYAYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
+G A + R V + ++ LC+ ++ A LM NT ++
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI ++ C G EA + EM D VS++ +I KA L + +L +M
Sbjct: 753 NIFIDRLCKE-GRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMV 808
Query: 236 RM-GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ +N +I A K + + +A++L+ M ++G +P+V+TYN +I LCK K+
Sbjct: 809 AVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKV 868
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
D+A + FDEM RGI + +Y + + G+E +LE M C+
Sbjct: 869 DKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 11/243 (4%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
VW RG + + +C + + + ++ +F++M G D Y+ VI +L
Sbjct: 114 VWA--GDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLC 171
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI-SPTI 313
+ + A +++ + +G P V Y L + CK +L +A + F R I SP
Sbjct: 172 QMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----RNIPSPDA 226
Query: 314 RTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
Y+A + + G LE +++M P TY +LI + + ++ +E
Sbjct: 227 IAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQF 430
+ + G PD ++ +++ L GK E AH M E+ P T L +Q
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 431 VER 433
V+R
Sbjct: 347 VDR 349
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 192/429 (44%), Gaps = 38/429 (8%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFL-WAGKQS 59
A T++ ILR E + GI + ++ + ++A WAG+
Sbjct: 22 ASTVLSILR------GEDPASLPAAGIDPCPAVFQQLRPSLPTVPDSALPALARWAGEA- 74
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
T +++L F AW L+ + T P L L+RRY +
Sbjct: 75 ----------TAVSLLASRGLFAAAWRLL--LAPSPTPPPLAA---FAPLVRRYARLGRA 119
Query: 120 GRAINAFYAYKRF--KFAVG--IEDFQGLLS----ALCRYKNVQDAEHLM---FCNKDVF 168
A+ AF +R ++ G I LL+ ALC+ + + A L +
Sbjct: 120 PAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDS 179
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + +++NI+L+GW G + ++W EM G+ VV++ +I R + +
Sbjct: 180 PPDERAYNILLHGWSRA-GRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAI 238
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D+M+ GIE + N +++ALA+ +DA +++ GVAPN+ T+NSL+
Sbjct: 239 ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGY 298
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTN 345
CK L A M +RGISPT RTY+ F +V + KM G P
Sbjct: 299 CKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQ 358
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY++L+K SR + V ++ E+ +G PD ++ T LIH L + EEA + +
Sbjct: 359 LTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFED 418
Query: 406 MKEKQLLPE 414
M ++ ++P+
Sbjct: 419 MFKRGIVPQ 427
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 13/294 (4%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
F W ++ R Y+ ++ + + D L EMR P++VT TL I
Sbjct: 169 FERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTL---I 225
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVF 168
C +AI + + ++ AL + QDA ++ F V
Sbjct: 226 EGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVA 285
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N +FN ++ G+C G A V M++RGI +++ ++K ++ +
Sbjct: 286 P-NISTFNSLVMGYCKH-GDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGM 343
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ +M G D+ Y ++ L++ ++ + +++ M G P++ T LI L
Sbjct: 344 NFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLL 403
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAF------LDIIRTGEEVFGLLESM 336
C+ + +EA F++M +RGI P TY L ++R +++ L+ S+
Sbjct: 404 CRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKLTNLMRSV 457
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 197/405 (48%), Gaps = 12/405 (2%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFF--LWAGKQSGYAHSTREYHTMIAILGK 77
+K+ G+ VS + + L+ + N ++ T F + G +T Y+ ++ +L +
Sbjct: 205 DKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQ 264
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+ K A +L+ +M P +V+ +++ YC V +G+ + +R
Sbjct: 265 LGKVKEAHSLLIQMEFRGNVPDVVSYS---VIVDGYCQVEQLGKVLKLMEELQRKGLKPN 321
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ ++S LC+ V +AE ++ N+ +FP N + +++G+ S E ++
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV-VYTTLISGFGKSGNVSVEY-KL 379
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM ++ I D V+++ +I +A + + +LF +M G++ D Y A+I K
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+K+A SL M EKG+ PNVVTY +L+ LCK ++D A + EM ++G+ P + T
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+A ++ + + G E+ L+E M G P TY ++ + + + ++ +
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ G P ++ L++ ++G LE+ + M +K ++P T
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 164/367 (44%), Gaps = 16/367 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I+ GK + L DEM+ + P VT ++ I C V A F
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM---IHGLCQAGKVVEARKLFS 416
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNI 185
+ L+ C+ +++A H K + P N ++ +++G C
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTALVDGLCKC 475
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A + EMS++G+ +V +++ +I+ K N+ + ++L ++M G D
Sbjct: 476 -GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ A K + A L++ M +KG+ P +VT+N L+ C + L++ + ML
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594
Query: 306 QRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+GI P T+++ + + +R E++ + M G P +TY +LIK + R
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIY---KGMHAQGVVPDTNTYNILIKGHCKAR 651
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ + E+ E G +SY +LI + K EEA + + EM+ + E + +
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYD 711
Query: 420 LLQDWSY 426
+ D +Y
Sbjct: 712 IFVDVNY 718
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y ++ L K + D A L+ EM P++ T L I C V
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL---INGLCKVG 511
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ +A+ F + ++ A C+ + A L+ +K + P +F
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP-TIVTF 570
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C + G + ER+ M +GI + +F+ ++ Y N+ + ++ M
Sbjct: 571 NVLMNGFC-MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L K M EKG + +YNSLIK K +K +
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F+EM G Y F+D+
Sbjct: 690 EARKLFEEMRTHGFIAEKEIYDIFVDV 716
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 53/416 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K++KFD +L ++M+ E L T ILI +C + A+
Sbjct: 46 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN---ILINCFCRRSQISLAL 102
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F T +
Sbjct: 103 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 162
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + M QRG ++V++ +++ K + L L ++M+
Sbjct: 163 FLHN------KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 216
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
IE D ++N +I +L K R V DA++L K ME KG+ PNVVTY+SLI LC + +A
Sbjct: 217 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 276
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE------------------EVFG------- 331
Q +M+++ I+P + T++A +D ++ G+ ++F
Sbjct: 277 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 336
Query: 332 ------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ E M C P TY LIK F + ++ + +++ E+S G D
Sbjct: 337 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+YT LI LF +G + A + + +M + P+ T +L D N +E+ +
Sbjct: 397 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 189/417 (45%), Gaps = 22/417 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D M P+LVT +++ C
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRG 201
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D A+N + K + F ++ +LC+Y++V DA +L K + P N ++
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP-NVVTY 260
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ C+ G +A ++ +M ++ I ++V+F+ +I + K + +L+D M
Sbjct: 261 SSLISCLCSY-GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D YN++++ + A + + M K P+VVTYN+LIK CK+++++
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYI 349
+ + F EM RG+ TY + + ++VF + M G P TY
Sbjct: 380 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF---KQMVSDGVPPDIMTYS 436
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+L+ + +V++ + ++ D YT +I + GK+++ + + K
Sbjct: 437 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 496
Query: 410 QLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ-----PQSGQ-NTRVISKKSDQDR 460
+ P T + +K+ ++ A LK + P SG NT + + D D+
Sbjct: 497 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 172/419 (41%), Gaps = 49/419 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y ++ L K D A L+++M + +V T+ I C
Sbjct: 180 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 236
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A+N F + + + L+S LC Y DA L+ K + P N +F
Sbjct: 237 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 295
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++ + G EAE+++ +M +R I D+ +++ +++ + L K ++F+ M
Sbjct: 296 NALIDAFVKE-GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 354
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D YN +I K + V+D L + M +G+ + VTY +LI+ L D
Sbjct: 355 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 414
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-----EVFG----------------LL 333
A++ F +M+ G+ P I TY LD + G+ EVF ++
Sbjct: 415 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 474
Query: 334 ESMRKMG----------------CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
E M K G +P TY +I R + + ++ E+G
Sbjct: 475 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 534
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQFVE 432
P+ +Y LI A +G + + EM+ + + + T +L D +K F++
Sbjct: 535 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 593
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DAI L M + P++V +N L+ + K +K D ++M + I + TY+
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ LL M K+G +P+ T L+ + ++ + + +++ E G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA M ++ P T
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 189
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 12/356 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
++ +I L K A L +EM RG E P++++ T+ I C + A++
Sbjct: 166 FNALINGLCNEGKIKEAVELFNEMVKRGHE--PNVISYTTV---INGLCKTGNTSMAVDV 220
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCN 184
F ++ + + ++ +LC+ + V DA E L + P N ++N I++G+CN
Sbjct: 221 FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G EA R++ EM R + + V+F+ ++ K + + +F+ M G+E D
Sbjct: 281 L-GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS 339
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA++ RL+ +A + + M KG AP +YN LI CK+R++DEA+ EM
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM 399
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ ++P TY + + + G +E L + M G P TY++L+ F +
Sbjct: 400 YHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHL 459
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+ + E P+ YT LI +F+ GKLE A + + ++ P+ +T
Sbjct: 460 DEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRT 515
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 9/292 (3%)
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGS 188
F+ + L++ LCR +V + + MF + P + +FN ++NG CN G
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF-KLGIHP-DAITFNALINGLCNE-GK 178
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+EA ++ EM +RG +V+S++ +I+ K N + +F +M++ G + + Y+
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I +L K RLV DA+ + M E+G+ PNV TYNS++ C +L+EA + F EM+ R
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 309 ISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P T+ +D + + G E + E+M + G +P TY L+ + R
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
KV+ + G P SY LI+ + +++EA EM K L P+ T
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVT 410
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F + ++K + V+ L +QM + + N +I+ L + V ++S++
Sbjct: 93 VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLG 152
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M + G+ P+ +T+N+LI LC K+ EA + F+EM++RG P + +Y ++ + +TG
Sbjct: 153 KMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTG 212
Query: 327 EEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ + M + GC+P TY +I + R + + +E+ E G P+ +Y
Sbjct: 213 NTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYN 272
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++H G+L EA + + EM + ++P T +L D
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 149/327 (45%), Gaps = 14/327 (4%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G + Y++++ + + + A L EM G + P+ VT IL+
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT---FTILVD 311
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
C V A F I + L+ C + + +A+ + + K P
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371
Query: 170 FNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
S+NI++NG+C S R EA+ + EM + + D V++S ++ + +
Sbjct: 372 -GAHSYNILINGYCK---SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF +M G + Y ++ K + +A+ L+KSM+EK + PN+V Y LI+
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPT 344
+ A KL+ A++ F ++ G P IRTY + +++ G +E + L M G P
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ +Y ++I+ F + + ++ +E+
Sbjct: 548 SCSYNVMIQGFLQNQDSSTAIRLIDEM 574
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 42/285 (14%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
L + N+ + F + G G AHS Y+ +I K R+ D A +L+ EM
Sbjct: 350 LQRLMNEAKKVFEIMIRKGCAPG-AHS---YNILINGYCKSRRMDEAKSLLAEMYHKALN 405
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P VT TL+ + C + A+N F +C Y
Sbjct: 406 PDTVTYSTLM---QGLCQLGRPKEALNLF-------------------KEMCSY-----G 438
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
H P N ++ I+L+G+C G EA ++ M ++ + ++V ++ +I
Sbjct: 439 PH---------P-NLVTYVILLDGFCKH-GHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
A L LF ++ G D + Y +I L K L +A L + ME+ G PN
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+YN +I+ + + A + DEM+ + S + T+ LD+
Sbjct: 548 SCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 53/416 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K++KFD +L ++M+ E L T ILI +C + A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN---ILINCFCRRSQISLAL 140
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F T +
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + M QRG ++V++ +++ K + L L ++M+
Sbjct: 201 FLHN------KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
IE D ++N +I +L K R V DA++L K ME KG+ PNVVTY+SLI LC + +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE------------------EVFG------- 331
Q +M+++ I+P + T++A +D ++ G+ ++F
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 332 ------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ E M C P TY LIK F + ++ + +++ E+S G D
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+YT LI LF +G + A + + +M + P+ T +L D N +E+ +
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 189/417 (45%), Gaps = 22/417 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D M P+LVT +++ C
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRG 239
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D A+N + K + F ++ +LC+Y++V DA +L K + P N ++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP-NVVTY 298
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ C+ G +A ++ +M ++ I ++V+F+ +I + K + +L+D M
Sbjct: 299 SSLISCLCSY-GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D YN++++ + A + + M K P+VVTYN+LIK CK+++++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYI 349
+ + F EM RG+ TY + + ++VF + M G P TY
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF---KQMVSDGVPPDIMTYS 474
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+L+ + +V++ + ++ D YT +I + GK+++ + + K
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 410 QLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ-----PQSGQ-NTRVISKKSDQDR 460
+ P T + +K+ ++ A LK + P SG NT + + D D+
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 172/419 (41%), Gaps = 49/419 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y ++ L K D A L+++M + +V T+ I C
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 274
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A+N F + + + L+S LC Y DA L+ K + P N +F
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 333
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++ + G EAE+++ +M +R I D+ +++ +++ + L K ++F+ M
Sbjct: 334 NALIDAFVKE-GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D YN +I K + V+D L + M +G+ + VTY +LI+ L D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-----EVFG----------------LL 333
A++ F +M+ G+ P I TY LD + G+ EVF ++
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 334 ESMRKMG----------------CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
E M K G +P TY +I R + + ++ E+G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQFVE 432
P+ +Y LI A +G + + EM+ + + + T +L D +K F++
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 631
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DAI L M + P++V +N L+ + K +K D ++M + I + TY+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ LL M K+G +P+ T L+ + ++ + + +++ E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA M ++ P T
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 45/395 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+GY +T ++T+I L K A ALID M P LVT +++ C D
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG---VVVNGLCKRGD 850
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A N ++ K G+ + ++ LC+YK++ DA +L K + P N +++
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP-NVVTYS 909
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G +A R+ +M +R I DV +FS +I + K L + +L+D+M +
Sbjct: 910 SLISCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 968
Query: 237 MGIE---------------------------------C--DRKVYNAVIHALAKGRLVKD 261
I+ C D YN +I K + V++
Sbjct: 969 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 1028
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ + + M ++G+ N VTYN LI+ L +A D A++ F EM+ G+ P I TY+ LD
Sbjct: 1029 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 1088
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G E+ + E +++ +PT TY ++I+ + + + + ++ +S G P
Sbjct: 1089 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 1148
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
D +Y +I G EEA + EMKE LP
Sbjct: 1149 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 1183
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 200/465 (43%), Gaps = 62/465 (13%)
Query: 1 AKTLVDILREFSHKRS-EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS 59
K + +LR FS K S + R K+ G+ SEL + A F K
Sbjct: 644 CKKALSLLRAFSGKTSYDYREKLSRNGL---SEL----------KLDDAVALFGEMVKSR 690
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
+ S E+ +++ + K+ KFD +L ++M+ + T ILI +C +
Sbjct: 691 PFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN---HYTYSILINCFCRRSQL 746
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFN 176
A+ + + I LL+ C K + +A L MF + NT +FN
Sbjct: 747 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG--YQPNTVTFN 804
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G + + EA + M +G D+V++ +++ K + L ++M++
Sbjct: 805 TLIHGLF-LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 863
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC------- 289
+E +YN +I L K + + DA++L K ME KG+ PNVVTY+SLI LC
Sbjct: 864 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 923
Query: 290 ----------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
K KL EA + +DEM++R I P+I TY + ++
Sbjct: 924 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 983
Query: 322 ---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +E + E M C P TY LIK F ++++ +V+ E+S+ G
Sbjct: 984 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +Y LI LF G + A + + EM + P T L D
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 1088
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 13/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY +++ + + A +L+D+M P +V + I C V
Sbjct: 253 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI---IDSLCKTKRV 309
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F +R + + L++ LC DA L+ K + P N +++
Sbjct: 310 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP-NVITYSA 368
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+ + G EA+ ++ EM + I D+V++S +I+ + + ++FD M
Sbjct: 369 LLDAFVKN-GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D YN +I+ K + V+D + L + M ++G+ N VTYN+LI+ +A +D+A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ F +M GISP I TY+ L + G E+ + E M+K TY +I+
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++ +S G PD +YT ++ L G L E Y +MK++ L+
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM-- 605
Query: 415 PKTDELLQD 423
K D L D
Sbjct: 606 -KNDCTLSD 613
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 151/313 (48%), Gaps = 16/313 (5%)
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYK------NVQDAEHLMFCNKDVFPFNTKSF 175
AI+ F + + I DF LLSA+ + K ++ ++ D++ +F
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY-----TF 226
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++N +C S A + +M + G D V+ +++ + + + + L D+M
Sbjct: 227 NIVINCFCCCFQVSL-ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G + D YNA+I +L K + V DA K +E KG+ PNVVTY +L+ LC + +
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
+A + +M+++ I+P + TY A LD ++ G+ E L E M +M P TY LI
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++++ + G D SY LI+ ++E+ + + EM ++ L+
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465
Query: 413 PEPKT-DELLQDW 424
T + L+Q +
Sbjct: 466 SNTVTYNTLIQGF 478
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K A L DEM PS+VT +L I +C +HD
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFC-MHD-----RLDE 993
Query: 128 AYKRFKFAVG------IEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILN 180
A + F+F V + + L+ C+YK V++ E ++ NT ++NI++
Sbjct: 994 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G G A+ ++ EM G+ ++++++ ++ K L K + +F+ ++R +E
Sbjct: 1054 GLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN +I + K V+D L ++ KGV P+VV YN++I C+ +EA
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172
Query: 301 FDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMG 340
F EM + G P Y+ + +R G E L++ MR G
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 253 LAKGRL----VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
L+K RL + DAI L M + P++V +N L+ + K +K D +M G
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218
Query: 309 ISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
I + T++ ++ +V +L M K+G +P T L+ F R + +
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +++ E G PD +Y A+I +L ++ +A ++ E++ K + P T
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 42/249 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y+ +I L + D A + EM P+++T TLL C
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL---DGLCKNG 1094
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ +A+ F +R K I + ++ +C+ V+D
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED--------------------- 1133
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
GW ++ +S +G+ DVV+++ +IS + + + + LF +MK
Sbjct: 1134 ---GW-----------DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + YN +I A + + + L+K M G A + T L+ + +LD
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD-- 1236
Query: 298 RQAFDEMLQ 306
++F +ML
Sbjct: 1237 -KSFLDMLS 1244
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 177/367 (48%), Gaps = 14/367 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMR-GGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
S E+ + + K++++ T L ++M G T T +L ILI C ++ V A
Sbjct: 92 SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTH----TVYSLNILINCLCRLNHVDFA 147
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIIL 179
++ + + + F L++ +C ++ A L N+ V + S+N ++
Sbjct: 148 VSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY--NEMVRSGHEPDVISYNTLI 205
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG CN G++ A V+ +M Q G +VV+++ II K R ++ + +M GI
Sbjct: 206 NGLCNS-GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D YN+++H L + +A L K ME+ G P+VVTYN +I L K R +++A
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
EM+ +GI P + TY L + G+ E L + M + GC+P Y +I
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ R + + +E+ + G P+ +Y+ ++H G+L+EA Q + EM + ++P
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444
Query: 417 TDELLQD 423
T +L D
Sbjct: 445 TFSILVD 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 185/409 (45%), Gaps = 48/409 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T+I + K A L +EM P +++ TL I C + A++ F
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTL---INGLCNSGNTNMAVHVFK 222
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCN 184
++ + + ++ +LC+ + V DA + F ++ V P + ++N I++G C
Sbjct: 223 KMEQNGCKPNVVTYNTIIDSLCKDRLVNDA--MDFLSEMVGRGIPPDAITYNSIVHGLC- 279
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR---------------------- 222
+G EA R++ M Q G DVV+++ II K R
Sbjct: 280 CLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVV 339
Query: 223 -------------NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
L++ +RLF +M++ G + D YN +I +L K RLV DA+ + M
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-- 326
++G+ PN VTY++++ C +LDEA Q F EM+ R + P T+ +D + + G
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E + E+M + G +P TY L+ + + KV+ + G PD SY L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQ 434
I+ + ++++A +M K+L P T + +++ Y + ++ Q
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 170/369 (46%), Gaps = 8/369 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q+G + Y+T+I L K R + A + EM G P +T ++ + C +
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI---VHGLCCL 281
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
+ A F ++ + + ++ +L + + V DA + D P + ++
Sbjct: 282 GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
IL+G C +G EA R++ +M Q+G DVV+++ II K R ++ + +M
Sbjct: 342 TTILHGLC-YLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI + Y+ ++H + +A L K M + V PN +T++ L+ LC+ +
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVS 460
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLI 352
EAR F+ M ++G+ P I TY+A ++ +R E + E M GC P +Y +LI
Sbjct: 461 EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ R+ + ++S P+ +Y ++ L G+L +A + + +M +L
Sbjct: 521 NGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGML 580
Query: 413 PEPKTDELL 421
P T +L
Sbjct: 581 PTLMTYSIL 589
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 8/365 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q+G Y+ +I L K R + A + EM P +VT T+L C +
Sbjct: 295 EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTIL---HGLCYL 351
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSF 175
+ AI F ++ + + ++ +LC+ + V DA + D P N ++
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ IL+G+CN+ G EA +++ EM R + + ++FS ++ + + + +F+ M
Sbjct: 412 STILHGFCNL-GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E + YNA+++ + +A + + M KG AP++ +YN LI C +R++D
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLI 352
+A+ +M + ++P TY+ + + + E +KM G PT TY +L+
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILL 590
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ K++ + E PD YT LI +F+ GKLE A + ++ +
Sbjct: 591 NGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQ 650
Query: 413 PEPKT 417
P +T
Sbjct: 651 PPGRT 655
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+V F + +K + V+ L +QM G+ N +I+ L + V A+S+
Sbjct: 93 IVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWG 152
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M + G+ P+V+T+ +LI +C K+ A + ++EM++ G P + +Y+ ++ + +G
Sbjct: 153 KMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSG 212
Query: 327 EEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ + M + GC+P TY +I + R + +E+ G PD +Y
Sbjct: 213 NTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYN 272
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+++H L G+L EA + + M++ P+ T ++ D Y + V
Sbjct: 273 SIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 171/365 (46%), Gaps = 23/365 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + ++ ++ + F+ W +E + ++ + I+I+ C ++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI----KVVLDVYSFGIVIKGCCEAGEI 179
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
++ + + F F+ + + L+ C+ ++ A KD+F F F ++
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA-------KDLF-FEMGKFGLVA 231
Query: 180 NGWCNII--------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
N W + G ++ ++ +M + G+ ++ +++C+++ K ++F
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M+ G+ C+ YN +I L + +A +M M+ G+ PN++TYN+LI C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTY 348
RKL +A ++ RG+SP++ TY+ + + G +++ M + G +P+ TY
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI F+R ++ + + E G PD +Y+ LIH + G++ EA + + M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471
Query: 409 KQLLP 413
K+ P
Sbjct: 472 KKFEP 476
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 5/301 (1%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC 183
F+ + K + + F ++ C ++ + L+ ++ F N + +++G C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +A+ ++ EM + G+ + +++ +I K + ++++M+ G+ +
Sbjct: 210 KK-GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN V++ L K KDA + M E+GV+ N+VTYN+LI LC+ K +EA + D+
Sbjct: 269 HTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 304 MLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M GI+P + TY+ +D +R + L ++ G P+ TY +L+ F +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD 388
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
KV E+ E G P + +YT LI + +E+A Q M+E L P+ T +
Sbjct: 389 TSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSV 448
Query: 421 L 421
L
Sbjct: 449 L 449
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 164/343 (47%), Gaps = 45/343 (13%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAIL 75
EM K++E G+ + + V++ + D F ++ ++ G + + Y+T+I L
Sbjct: 254 EMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ K + A ++D+M+ P+L+T TL I +C V +G+A++ K
Sbjct: 314 CREMKANEANEVMDQMKSDGINPNLITYNTL---IDGFCGVRKLGKALSLCRDLKS---- 366
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+GL +L Y NI+++G+C G + A +V
Sbjct: 367 ------RGLSPSLVTY------------------------NILVSGFCKK-GDTSGAGKV 395
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA- 254
EM +RGI V+++ +I ++++ N+ K ++L M+ +G+ D Y+ +IH
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
KGR+ +A L KSM EK PN V YN+++ CK A + F EM ++ + P +
Sbjct: 456 KGRM-NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+Y ++++ R +E GL+E M G P+ D+ + LI +
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS-DSILNLISR 556
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D + VI + ++ + L+ + E G +PNVV Y +LI CK ++++A+ F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
EM + G+ TY + + + G ++ F + E M++ G P TY ++ + +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + FKV++E+ E G + +Y LI L K EA++ +MK + P T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341
Query: 419 ELLQD 423
L D
Sbjct: 342 NTLID 346
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 18/263 (6%)
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
F N F + SFN WC + S+ + DV SF +I +A
Sbjct: 132 FNNLLTFVVGSSSFN---QWWC------------FFNESKIKVVLDVYSFGIVIKGCCEA 176
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ K L +++ G + +Y +I K ++ A L M + G+ N TY
Sbjct: 177 GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTY 236
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
LI L K + + +++M + G+ P + TY+ ++ + + G ++ F + + MR+
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRE 296
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G TY LI R + +V +++ +G P+ +Y LI KL +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A ++K + L P T +L
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNIL 379
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 182/412 (44%), Gaps = 45/412 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R D ++AF F + G + Y +I L R+ D A L +M+ E P
Sbjct: 266 RKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP--- 321
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T +T +LI+ C A+N + I + L+ +LC + A L+
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 162 ---------------------FCNK-------DVFPF--------NTKSFNIILNGWCNI 185
+C + DV NT+++N ++ G+C
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A V +M +R + DVV+++ +I ++ N RL M G+ D+
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++I +L K + V++A L S+E+KGV PNVV Y +LI CKA K+DEA ++ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ P T++A + + G +E L E M K+G QPT T +LI + + F
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++ +G PD +YT I G+L +A +M+E + P+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 167/362 (46%), Gaps = 25/362 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ M+ K+ + A + ++ P T +L I YC D+ A F
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL---IMGYCQRKDLDSAFKVFN 277
Query: 128 -----AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILN 180
+R + A + L+ LC + + +A L KD FP +++ +++
Sbjct: 278 EMPLKGCRRNEVA-----YTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIK 331
Query: 181 GWCNIIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
C GS R++E + + EM + GI ++ +++ +I K L QM G
Sbjct: 332 SLC---GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YNA+I+ K +++DA+ +++ ME + ++PN TYN LIK CK+ + +A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
++ML+R + P + TY++ +D R+G + + LL M G P TY +I
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ ++ +++ + + G P+ YTALI GK++EAH +M K LP
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 416 KT 417
T
Sbjct: 568 LT 569
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 36/421 (8%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
HK +++ + +S VS + S + D + A F W + Y HS Y +++
Sbjct: 76 HKSPSLKSMVS----AISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLL 130
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL-----IRRYCAVHDVGRAINAFY 127
+L + G G +V K LL++ + V D+ R +N
Sbjct: 131 TLL---------------INNGYVG--VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDE 173
Query: 128 AYK-RFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWCNI 185
++ ++K +G + LL++L R+ V + + + M +D N ++N ++NG+C +
Sbjct: 174 RFELKYKLIIGC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ EA + ++ + G+ D +++ +I Y + ++L ++F++M G +
Sbjct: 232 -GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +IH L R + +A+ L M++ P V TY LIK LC + + EA EM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ GI P I TY +D + + E+ LL M + G P TY LI + +
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ V + P+ +Y LI + + +A +M E+++LP+ T L
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 423 D 423
D
Sbjct: 470 D 470
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 176/448 (39%), Gaps = 101/448 (22%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G + Y +I L KF+ A L+ +M P+++T L I YC
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL---INGYCKR 406
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A++ + K + + L+ C+ NV A ++ + V P + +
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP-DVVT 464
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +++G C G+ A R+ M+ RG+ D +++ +I K++ + + LFD +
Sbjct: 465 YNSLIDGQCRS-GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 235 KRMGIECDRKVY-----------------------------------NAVIHAL-AKG-- 256
++ G+ + +Y NA+IH L A G
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 257 ---------------------------RLVKD-----AISLMKSMEEKGVAPNVVTYNSL 284
RL+KD A S + M G P+ TY +
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMG 340
I+ C+ +L +A +M + G+SP + TY + + D+ +T F +L+ MR G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN-FAFDVLKRMRDTG 702
Query: 341 CQPTNDTYIMLIKKF------------------SRWRQFGNVFKVWNEISENGNGPDRSS 382
C+P+ T++ LIK S +F V ++ ++ E+ P+ S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQ 410
Y LI + G L A + + M+ +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNE 790
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 125/320 (39%), Gaps = 37/320 (11%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D++ A++ F SG Y T I + + A ++ +MR P L T
Sbjct: 617 DFDHAYSRF-QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR------YKNVQDA 157
+L I+ Y D+G+ AF KR + G E Q +L + Y + +
Sbjct: 676 SSL---IKGY---GDLGQTNFAFDVLKRMR-DTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
E + ++ F+T + +M + + + S+ +I
Sbjct: 729 EPELCAMSNMMEFDT-------------------VVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 218 YSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ NL ++FD M+R GI V+NA++ K + +A ++ M G P
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLL 333
+ + LI L K + + F +LQ G + +D + + G E + L
Sbjct: 830 QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Query: 334 ESMRKMGCQPTNDTYIMLIK 353
M K GC+ ++ TY +LI+
Sbjct: 890 NVMEKNGCKFSSQTYSLLIE 909
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME-EKGVAPNVVTYNSLI 285
V+ L ++M + + K Y +I + + ++ A + M+ +G++P+ + +N+L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQ 342
CK +K +EA + D+M+ G P + + + + + GE+ G + +++ + G
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ ++I + ++++N + +NG +Y+ LI
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM + +VT L +I
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMV--RSPICVVTPMELSQVI 166
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R +G+AI FY K K + + ++ L +Y+ V + + M
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T +++ +++ +C + G A R+ EM + G+ ++ IIS + K N+H
Sbjct: 227 QP-DTVTYSALISAFCKL-GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ M D Y +I L K + +A M+ +G P+ V N++I
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE----EVFGLLESMRKMGCQP 343
L KA +LD+ + F+EM P + TY+ + + + EVF E M+ G P
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 404 MEMKE 408
E+KE
Sbjct: 465 QELKE 469
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 168/377 (44%), Gaps = 16/377 (4%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ P T + ++I + + +V A++
Sbjct: 230 TVTYSALISAFCKLGRQDSAIRLLNEMKENGMQP---TAKIYTMIISLFFKLDNVHGALS 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
F + + + L+ L + + +A H ++ K +++N N
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFY---HEMQREGCKPDTVVMNNMIN 343
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQMKRMGI 239
+G + + +++ EM +VV+++ II SK+R + +V F++MK GI
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSR-VSEVFSWFERMKGSGI 402
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++ D A +
Sbjct: 403 SPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 462
Query: 300 AFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F E+ + S + R Y + + + G ++ L + M K+GC P Y L+ +
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLA 522
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
R ++ E+G PD +SY +++ L G A + MK + P+
Sbjct: 523 RACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAV 582
Query: 417 T-DELLQDWSYNKQFVE 432
+ + +L S+ F E
Sbjct: 583 SYNTVLSALSHAGMFEE 599
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 145/348 (41%), Gaps = 49/348 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G T + MI LGK + D L +EM P++VT T++ +
Sbjct: 327 QREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL-----F 381
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
R F ++R K GI PF +++
Sbjct: 382 ESKSRVSEVFSWFERMK-GSGISPS---------------------------PF---TYS 410
Query: 177 IILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I+++G+C + E+ M EM ++G ++ +I KA+ LF +
Sbjct: 411 ILIDGFCK----TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K +VY +I L K + DAI+L M + G PNV YN+L+ L +A
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACM 526
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
LDEA +M + G P I +Y+ L+ + +TG +L +M+ +P +Y
Sbjct: 527 LDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
++ S F ++ E++ G D +Y++++ A+ GK+++
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI---GKVDQ 631
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC + S +I A+ + K + +F Q+K + + YN++I L
Sbjct: 148 EMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHE 207
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A + +EM + G+ PT +
Sbjct: 208 GQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + + V G L E MR M C+P TY LI+ + + + ++E+
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +I+ L G+L++ + + EM +P
Sbjct: 328 REGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIP 368
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-YNAVIHALAKGRLV 259
+R +D ++ +I C ++ ++ +M R I + + VI L +++
Sbjct: 116 KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMI 175
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHA 318
AI++ ++ + P YNS+I L + ++ + ++EM G P TY A
Sbjct: 176 GKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSA 235
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + G + LL M++ G QPT Y M+I F + ++ E+
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +YT LI L G+++EA+ +Y EM+ + P+
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPD 334
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 45/395 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+GY +T ++T+I L K A ALID M P LVT +++ C D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG---VVVNGLCKRGD 236
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A N ++ K G+ + ++ LC+YK++ DA +L K + P N +++
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP-NVVTYS 295
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G +A R+ +M +R I DV +FS +I + K L + +L+D+M +
Sbjct: 296 SLISCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 237 MGIE---------------------------------C--DRKVYNAVIHALAKGRLVKD 261
I+ C D YN +I K + V++
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ + + M ++G+ N VTYN LI+ L +A D A++ F EM+ G+ P I TY+ LD
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G E+ + E +++ +PT TY ++I+ + + + + ++ +S G P
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
D +Y +I G EEA + EMKE LP
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 177/401 (44%), Gaps = 47/401 (11%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ +++ + K+ KFD +L ++M+ P T ILI +C + A+
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI-PH--NHYTYSILINCFCRRSQLPLAL 136
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILN 180
+ + I LL+ C K + +A L MF + NT +FN +++
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG--YQPNTVTFNTLIH 194
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G + + EA + M +G D+V++ +++ K + L ++M++ +E
Sbjct: 195 GLF-LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC----------- 289
+YN +I L K + + DA++L K ME KG+ PNVVTY+SLI LC
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 290 ------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFLD---I 322
K KL EA + +DEM++R I P+I TY + ++ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+E + E M C P TY LIK F ++++ +V+ E+S+ G + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y LI LF G + A + + EM + P T L D
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K A L DEM PS+VT +L I +C +HD
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFC-MHD-----RLDE 379
Query: 128 AYKRFKFAVG------IEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILN 180
A + F+F V + + L+ C+YK V++ E ++ NT ++NI++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G G A+ ++ EM G+ ++++++ ++ K L K + +F+ ++R +E
Sbjct: 440 GLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN +I + K V+D L ++ KGV P+VV YN++I C+ +EA
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 301 FDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMG 340
F EM + G P Y+ + +R G E L++ MR G
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DA++L M + P+++ ++ L+ + K K D ++M GI TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ +L M K+G +P T L+ + ++ + +++ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ ++ LIH LFL+ K EA M K P+ T
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 42/249 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y+ +I L + D A + EM P+++T TLL C
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL---DGLCKNG 480
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ +A+ F +R K I + ++ +C+ V+D
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED--------------------- 519
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
GW ++ +S +G+ DVV+++ +IS + + + + LF +MK
Sbjct: 520 ---GW-----------DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + YN +I A + + + L+K M G A + T L+ + +LD
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD-- 622
Query: 298 RQAFDEMLQ 306
++F +ML
Sbjct: 623 -KSFLDMLS 630
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 44/340 (12%)
Query: 144 LLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L++ LCR +V A + MF + P +FN ++NG CN G +EA ++ EM
Sbjct: 129 LINCLCRLNHVDFAVSILGKMF-KLGIHP-TASTFNALINGLCNE-GKIKEAVELFNEMV 185
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+RG +V+S++ II+ K N + +F +M++ G + D YN +I +L K RLV
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245
Query: 261 DAISLMKSMEEKGVAPNVVTYNS-----------------------------------LI 285
DA+ + M ++G+ PNV TYN L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQ 342
LCK + EAR F+ M ++G+ P I TY+A +D + R E + E M + GC
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P +Y +LI F + R+ + E+ PD +Y+ L+ L G+ +EA
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
+ EM LLP T +L D ++ + LK+ Q
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 12/364 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVH 117
G + ++ +I L K A L +EM RG E P++++ T+ I C
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE--PNVISYNTI---INGLCKTG 207
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFN 176
+ A++ F ++ + + ++ +LC+ + V DA + D P N ++N
Sbjct: 208 NTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYN 267
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G+C I+G EA R++ EM R + D V+ + ++ K + + +F+ M
Sbjct: 268 CMVHGFC-ILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+E + YNA++ RL+ +A + + M +G AP V +YN LI CK+R++DE
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A+ EM + ++P TY + + + G +E + + M G P TY +L+
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F + K+ + E P+ +T LI +F+ GKLE A + + ++ + P
Sbjct: 447 GFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506
Query: 414 EPKT 417
+T
Sbjct: 507 TIRT 510
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V F + ++K + V+ L +QM G+ + N +I+ L + V A+S++
Sbjct: 88 VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILG 147
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M + G+ P T+N+LI LC K+ EA + F+EM++RG P + +Y+ ++ + +TG
Sbjct: 148 KMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTG 207
Query: 327 EEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ + M + GC+P TY +I + R + + +E+ + G P+ +Y
Sbjct: 208 NTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYN 267
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++H + G+L EA + + EM + ++P+ T +L D
Sbjct: 268 CMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M G+ ++V S + +I+C + ++ + + +M ++GI +NA+I+ L
Sbjct: 113 QMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEG 172
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K+A+ L M +G PNV++YN++I LCK A F +M Q G P + TY+
Sbjct: 173 KIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + R + L M G P TY ++ F Q +++ E+
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD + T L+ L G + EA + M EK + P T L D
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMD 341
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL G + Y+ M+ + + + A L EM G + P VT L IL+
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT---LTILVD 306
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
C V A F I + L+ C + + +A+ + + + P
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366
Query: 170 FNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
S+NI++NG+C S R EA+ + EM + + D V++S ++ + +
Sbjct: 367 -GVHSYNILINGFCK---SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +F +M G+ + Y+ ++ K + +A+ L+KSM+EK + PN+V + LI+
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEG 482
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPT 344
+ A KL+ A++ F ++ GI PTIRTY + +++ G +E + L M G P
Sbjct: 483 MFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ +Y ++I+ F + + ++ +E+ + S++ L+
Sbjct: 543 SCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 19/237 (8%)
Query: 103 KQTLLILIRRYCA--VHDVGRAINAFYAYKRFKFAVGI-------------EDFQGLLSA 147
K+ I+IR+ CA VH IN F +R A + + L+
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC++ ++A ++ C+ + P N +++I+L+G+C G EA ++ M ++ +
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLP-NLVTYSILLDGFCKH-GHLDEALKLLKSMQEKKLE 470
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++V + +I A L LF ++ GI + Y +I L K L +A L
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ ME+ G PN +YN +I+ + + A + DEM+ + S + T+ LD+
Sbjct: 531 FRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDL 587
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I L KV + A L+ + G P++V T+ I C V V
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI---IDSMCKVKLV 228
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF----PFNTKSF 175
A + + + + + L+S C ++DA L NK +F P N +F
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF--NKMIFENINP-NVYTF 285
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+++G+C +EA+ V M ++GI DV +++ ++ Y + ++K +F+ +
Sbjct: 286 NILVDGFCKE-RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ + Y+ +IH K + V +A++L K M + P+VVTYNSLI LCK K+
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
A + DEM RG+ TY++ LD + +V LL M+ G QP TY L+
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + V+ ++ G D + YTA+I +G +E+ +M+E +
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524
Query: 413 PEPKTDELL 421
P T E++
Sbjct: 525 PNAVTYEII 533
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + ++ G C + G +A + ++ G + VS+ +I+ K L+L
Sbjct: 141 NVITLTTLIKGLC-LKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ ++ + +YN +I ++ K +LV +A L M KG++P+VVTYN+LI C
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
K+ +A F++M+ I+P + T++ +D R +E +L M K G +P T
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ ++ ++ ++N IS+ G P+ SY+ +IH K++EA + EM
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379
Query: 408 EKQLLPEPKTDELLQD 423
++P+ T L D
Sbjct: 380 CNNIIPDVVTYNSLID 395
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 21/305 (6%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAH------------STREYHTMIAILGKV 78
SE+VS+ +S + A + F GK + ++ ++ K
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R+ A ++ M P + T +L+ RYC V +V +A + F + I
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLM---DRYCLVKEVNKAKHIFNTISQRGVNPNI 352
Query: 139 EDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ ++ C+ K V +A +L M CN ++ P + ++N +++G C + G A ++
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCN-NIIP-DVVTYNSLIDGLCKL-GKISYALKL 409
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM RG+ +D ++++ I+ K + K + L +MK GI+ D Y ++ L K
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
++DA + + + KG +V Y ++I+ C DE+ +M + G P T
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVT 529
Query: 316 YHAFL 320
Y +
Sbjct: 530 YEIII 534
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 187/411 (45%), Gaps = 80/411 (19%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H R T I ++ + + A AL+D G + G Y A+
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAG--------------AYTAL--- 178
Query: 120 GRAINAFYAYKRFKFAVGIEDFQ-----GLLSALCRYKNV-----------QDAEHLMFC 163
++AF RF+ AV + F+ G+ A+ Y V ++ L+
Sbjct: 179 ---VSAFSRAGRFRDAVAV--FRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 164 NKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K+ V P + ++N +++ C +EA +V+ EM G D V+F+ ++ Y KA
Sbjct: 234 MKEHGVAP-DRYTYNTLIS-CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKA 291
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + + +M+R+G YN++I + K L++ A++L + ME KG+ P+VVTY
Sbjct: 292 RRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTY 351
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------DIIRT 325
+LI L +A K+D A +DEM++ G P + TY+A + D +R+
Sbjct: 352 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRS 411
Query: 326 G----------------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
EV G+ + M+K G P DTY+ LI +SR F
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 471
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ + E G PD S+Y A++ AL G+ E+A + + EM+E+ P+
Sbjct: 472 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 180/451 (39%), Gaps = 79/451 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--------- 107
K SG+ +++++ + GK R+ D A +I EM PS+VT +L+
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329
Query: 108 ---ILIRRYCAVHDVGRAINAFYAY-----KRFKFAVGIEDF-----QGLLSALCRYKNV 154
+ +++ V + + + + K I ++ G LC Y
Sbjct: 330 EQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY--- 386
Query: 155 QDAEHLMFCNKDVFP--------FNTKSFNIILNGWCNII------GSSREAERVWMEMS 200
+A M + FP + F + W ++ G E V+ EM
Sbjct: 387 -NALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 445
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G + ++ +IS YS+ ++++ +M GI D YNAV+ ALA+G +
Sbjct: 446 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------------------- 295
A L MEE+ P+ +Y+SL+ A++LD
Sbjct: 506 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Query: 296 ----------EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
EA +AF E+ Q+ S I +A + I R +V +L M++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ TY L+ +SR + EI +G PDR SY +I+A G+++EA +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685
Query: 403 YMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ EMK L P+ T + ++ + N F E
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 147/344 (42%), Gaps = 25/344 (7%)
Query: 30 SSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
S+ V ++++W +N ++ + K++GY Y ++I+ + FD
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + M P + T +L + R GR A + + D
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARG------GRWEQAEKLFAEMEERDCKPDEY 524
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN------IILNGWCNIIGSSREAERVW 196
S L Y N + + + + D++ + N +++N N + EAE+ +
Sbjct: 525 SYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA---EAEKAF 581
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+E+ Q+ D+ + ++S Y K R + KV ++ MK I YN+++H ++
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +++ ++ GV P+ +YN++I + ++ EA + F EM G+ P + TY
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 317 HAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ F+ + EE L+ M GC+P TY +++ + R
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 43/248 (17%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
E+ G+ + + I ++A L + L D D Y A++ A ++
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP----GPDAGAYTALVSAFSRAG 186
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSL-------------------------IKP----- 287
+DA+++ + M + GV P +VTYN + + P
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 288 -----LCKARKL-DEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRK 338
C+ R L EA Q FDEM G P T+++ LD+ R +E +++ M +
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+GC P+ TY LI + + + E+ G PD +YT LI L GK++
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDA 366
Query: 399 AHQYYMEM 406
A Y EM
Sbjct: 367 AIVEYDEM 374
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ D AL D++ P +TL+++ + V+++ A AF
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK---VNNLAEAEKAFL 582
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
++ + ++ I ++S + + V+ E ++ K+ + ++N +++ + +
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL- 641
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + E + E+ G+ D S++ +I Y + + + RLF +MK G++ D Y
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
N + + + ++AI L++ M +G PN TYNS+++ C+ KL +A+
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ +V I +A+ + +A +L+ + P+ Y +L+ +A + +A
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDA 191
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
F M+ G+ P I TY H + + +EV L+ SM++ G P TY LI
Sbjct: 192 VAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLIS 251
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + +V++E+ +G PD+ ++ +L+ + +EA + EM+ P
Sbjct: 252 CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPP 311
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T L SY K + Q +LK G V++
Sbjct: 312 SVVTYNSLIS-SYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 149/286 (52%), Gaps = 10/286 (3%)
Query: 137 GIED---FQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
GI D + LL+ LC Q+A H+M + P + S++ ++NG+ G
Sbjct: 47 GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKE-GDLD 105
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+ + EM + I +VV+++ II+ KA+ + K + + M + G+ D YN+++
Sbjct: 106 KTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 165
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+
Sbjct: 166 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 225
Query: 311 PTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY L T E+ GLL+ M + G P + + +L+ +++ + V
Sbjct: 226 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 285
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++++ + G P+ +Y A+I L +G++E+A Y+ +M ++ L P
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 130/256 (50%), Gaps = 9/256 (3%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNL 224
DVF S+NI+LNG C+ S E + + G C DVVS+S +I+ + K +L
Sbjct: 50 DVF-----SYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K +++M I + YN++I AL K + V A+ ++ +M + GV P+ +TYNS+
Sbjct: 105 DKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 164
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
+ C + + EA +M G+ P + TY++ +D + + G E + +SM K G
Sbjct: 165 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 224
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY L++ ++ + + + + NG P+ ++ L+ A K+EEA
Sbjct: 225 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 284
Query: 402 YYMEMKEKQLLPEPKT 417
+ +M+++ L P T
Sbjct: 285 VFSKMRQQGLNPNAVT 300
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 166/364 (45%), Gaps = 28/364 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D ++ +EM P++VT ++ I C V +A+
Sbjct: 91 YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSI---IAALCKAQTVDKAMEVLT 147
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + ++ C + Q E ++F K DV +N+ +
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFC--SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ ++ ++ ++ Y+ L ++ L D M R GI
Sbjct: 206 NGRCT------EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 259
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ ++ A AK V++A+ + M ++G+ PN VTY ++I LCK+ ++++A
Sbjct: 260 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 319
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRT------GEEVFGLLESMRKMGCQPTNDTYIMLIK 353
F++M+ G+SP Y++ + + T EE+ +LE + + C T + +I
Sbjct: 320 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL--ILEMLDRGICLNTI-FFNSIID 376
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + K+++ + G PD +Y+ LI L GK++EA + M + P
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Query: 414 EPKT 417
+ T
Sbjct: 437 DCVT 440
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 11/313 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
IL+ Y V A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI-- 325
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N +N +++G C R AE + +EM RGIC + + F+ II + K
Sbjct: 326 DEGLSPGNI-VYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D Y+ +I + +A L+ SM G+ P+ VTY++
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
LI CK ++ +A F EM G+SP I TY+ L + R L + K G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
Q TY +++ + + + +++ + + ++ +I AL G+ +EA
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563
Query: 401 QYYMEMKEKQLLP 413
++ L+P
Sbjct: 564 DLFVAFSSNGLVP 576
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 159/345 (46%), Gaps = 8/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++ K K + A + +MR P+ VT ++ ++ + V D A+ F
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED---AMLYFE 322
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
+ G + L+ LC + AE L+ D NT FN I++ C
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE- 381
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E+E+++ M + G+ D++++S +I Y A + + +L M +G++ D Y
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ +I+ K +KDA+ L + ME GV+P+++TYN +++ L + R+ A++ + + +
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITK 501
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G + TY+ L + + ++ + +++ M + T+ ++I + +
Sbjct: 502 SGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++ S NG P+ +Y + + G LEE Q ++ M++
Sbjct: 562 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKP 287
+FD++ R GI D YN +++ L ++A+ L+ M + G P+VV+Y+++I
Sbjct: 39 VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
K LD+ ++EML + ISP + TY++ + + +T ++ +L +M K G P
Sbjct: 98 FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY ++ F Q ++ +G PD +Y +L+ L NG+ EA + +
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Query: 405 EMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
M ++ L PE T LLQ ++ VE
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVE 246
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 17/354 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLI--LIRRYCA 115
G + Y+++I L K++ A LI EM RG + T+ +I +C
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-------ICLNTIFFNSIIDSHCK 380
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKS 174
V + F R I + L+ C + +A L+ V + +
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ ++NG+C I ++A ++ EM G+ D+++++ I+ + R L+ +
Sbjct: 441 YSTLINGYCKI-SRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + + YN ++H L K +L DA+ + +++ + T+N +I L K +
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
DEA+ F G+ P TY +II G EE+ L SM GC + +
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+++ + + + I E + S+ + I L GK +E H++ E
Sbjct: 620 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFLPE 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG--CQPTNDTYI 349
++AR FDE+L+RGI P + +Y+ L+ + +E LL M G C P +Y
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I F + + +NE+ + P+ +Y ++I AL +++A + M +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 410 QLLPEPKT 417
++P+ T
Sbjct: 153 GVMPDCMT 160
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 165/351 (47%), Gaps = 8/351 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ + R D L+ EM P T T IL+ D+ + +
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEP---TVGTYTILVDGLSRAGDISKVEAVYD 242
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
KR A + + +++A CR NV+ A + C N +++ ++NG+C I
Sbjct: 243 EMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKI- 301
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G AE + +M RG+ ++ + F+ +I Y + + K L + M++MGIE D Y
Sbjct: 302 GQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTY 361
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N + L + ++DA L+ M EKGVAPN V+Y +LI K + EAR+ F +M
Sbjct: 362 NTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG 421
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P++ TY+ +D I+ G E + M K G P TY L+ +
Sbjct: 422 KGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDV 481
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ E+ G P+ +YTAL+ L G+ EEA Q Y +M L P+
Sbjct: 482 ALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPD 532
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 13/289 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFP-----FNTKSFNIILNGWCNIIGSSREAERVWME 198
++ C+ +V DA L+ D P N +N +L+ + A + E
Sbjct: 154 VVDGFCKSGSVDDAHGLL----DELPRHGVGLNACCYNSLLDSYTRQRNDDAVAG-LLKE 208
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG+ V +++ ++ S+A ++ KV ++D+MKR + D Y+AVI+A +G
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+ A + GV PN TY +LI CK +++ A +M RG+ ++
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D R G E+ + M KMG + TY L R + + K+ + ++E G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
P+ SYT LI G + EA + + +M+ K P T ++ D
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 437
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + R Y +I K+ + + A L+ +M+ G + + T+ I YC V
Sbjct: 283 GVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM---IDGYCRHGMV 339
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A+ ++ + I + L LCR ++DA+ L+ K V P N S+
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP-NYVSYTT 398
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ G EA R++ +M +G VV+++ +I Y K ++ + R +M++
Sbjct: 399 LISIHAKE-GDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK 457
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y ++H V A+ L + M+ +G PNVV Y +L+ L K + +EA
Sbjct: 458 GLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEA 517
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRT 325
Q +D+ML G++P Y + + T
Sbjct: 518 FQLYDDMLAAGLTPDDTLYSVLVGSLHT 545
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
G+L A L K++ + ++ + ++ CK+ +D+A DE+ + G+
Sbjct: 126 GQLPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC 185
Query: 316 YHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y++ LD R + V GLL+ M G +PT TY +L+ SR V V++E+
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D Y+A+I+A G + A + + E + P +T
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERT 290
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 192/429 (44%), Gaps = 38/429 (8%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFL-WAGKQS 59
A T++ ILR E + GI + ++ + ++A WAG+
Sbjct: 22 ASTVLSILR------GEDPASLPAAGIDPCPAVFQQLRPSLPTVPDSALPALARWAGEA- 74
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
T +++L F AW L+ + T P L L+RRY +
Sbjct: 75 ----------TAVSLLTSRGLFAAAWRLL--LAPSPTPPPLAA---FAPLVRRYARLGRA 119
Query: 120 GRAINAFYAYKRF--KFAVG--IEDFQGLLS----ALCRYKNVQDAEHLM---FCNKDVF 168
A+ AF +R ++ G I LL+ ALC+ + + A L +
Sbjct: 120 PAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDS 179
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + +++NI+L+GW G + ++W EM G+ VV++ +I R + +
Sbjct: 180 PPDERAYNILLHGWSRA-GRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAI 238
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D+M+ GIE + N +++ALA+ +DA +++ GVAPN+ T+NSL+
Sbjct: 239 ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGY 298
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTN 345
CK L A M +RGISPT RTY+ F +V + KM G P
Sbjct: 299 CKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQ 358
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY++L+K SR + V ++ E+ +G PD ++ T LIH L + EEA + +
Sbjct: 359 LTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFED 418
Query: 406 MKEKQLLPE 414
M ++ ++P+
Sbjct: 419 MFKRGIVPQ 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 7/272 (2%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
F W ++ R Y+ ++ + + D L EMR P++VT TL I
Sbjct: 169 FERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTL---I 225
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVF 168
C +AI + + ++ AL + QDA ++ F V
Sbjct: 226 EGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVA 285
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N +FN ++ G+C G A V M++RGI +++ ++K ++ +
Sbjct: 286 P-NISTFNSLVMGYCKH-GDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGM 343
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ +M G D+ Y ++ L++ ++ + +++ M G P++ T LI L
Sbjct: 344 NFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLL 403
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
C+ + +EA F++M +RGI P TY +
Sbjct: 404 CRRHQFEEACAEFEDMFKRGIVPQYITYQKLM 435
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 185/373 (49%), Gaps = 15/373 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ L KV K + A +I++M+ P+++T TL I YC + +G+ A
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTL---IDGYCKMGRIGKMYKADA 214
Query: 128 AYKRFKFAVGI----EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
K A GI + L+ C+ +NV A + + + P N ++NI++NG
Sbjct: 215 ILKEM-VAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP-NVVTYNILING 272
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C+ G EA + +M + +VV+ + +I+ + K + +++ + LF+ M++ G++
Sbjct: 273 LCSD-GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y +I A K ++DA +L M ++G+ P V TYN LI LC+ + AR
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM+ + +S + TY+ +D + + GE + LL+ M + G P++ TY L+ + R
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
V + G + ++ LI L G+LE+A+ EM E+ L+P T
Sbjct: 452 GNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511
Query: 419 ELLQDWSYNKQFV 431
E++++ K FV
Sbjct: 512 EIIKEEMMEKGFV 524
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 186/440 (42%), Gaps = 28/440 (6%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE-------- 95
D E +F W+ K+ +HS ++ L +K+ + +D+ E
Sbjct: 11 DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI 70
Query: 96 ------TGPSLVTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
+G S L +L+ + + R AF + F + + LLS L
Sbjct: 71 FHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGL 130
Query: 149 CRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
+ D E + M K N SFNI++NG C +G A V +M G+
Sbjct: 131 VKESENGDMEFVYREMIKRK--IELNVISFNIVVNGLCK-VGKLNRAGDVIEDMKVWGVS 187
Query: 206 YDVVSFSCIISCYSKARNLHKVLR---LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
+V++++ +I Y K + K+ + + +M GI + YN +I K V A
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + M+ +G+ PNVVTYN LI LC K+DEA D+M+ + P + T++ ++
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307
Query: 323 I---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+T E L M K G P TY LI + + + + F ++N + + G P+
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPE 367
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
S+Y LI L G ++ A EM K+L + T +L D S K+ R+ L
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID-SLCKKGESRKAVKLL 426
Query: 440 AHQPQSGQNTRVISKKSDQD 459
+ G N ++ + D
Sbjct: 427 DEMFEKGLNPSHVTYNTLMD 446
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 9/328 (2%)
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKSFNIILNGWCNI--IGS 188
K + + F +++ LC+ + A ++ K V P N ++N +++G+C + IG
Sbjct: 150 KIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP-NVITYNTLIDGYCKMGRIGK 208
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+A+ + EM +GIC + V+++ +I + K N+ +R+F +M+R G+ + YN
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I+ L V +A++L M + PNVVT+N LI CK + ++EA F++M ++G
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328
Query: 309 ISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY +D + G E+ F L M G P TY LI R
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+ NE+ D +Y LI +L G+ +A + EM EK L P T L D
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD-G 447
Query: 426 YNKQFVERQIASLKAHQPQSGQNTRVIS 453
Y ++ R ++ + G+ V++
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVT 475
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+ +I L K D A AL D+M + P++VT +LI +C
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN---VLINGFCKN 311
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
V AIN F ++ + L+ A C+ ++DA L M ++ +FP +
Sbjct: 312 KTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP-EVST 370
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C G + A + EM + + DVV+++ +I K K ++L D+M
Sbjct: 371 YNCLIAGLCRK-GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+ YN ++ + ++ A+ + ME KG NVVT+N LIK C +L
Sbjct: 430 FEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRL 489
Query: 295 DEARQAFDEMLQRGISPTIRTYH 317
++A +EML+RG+ P TY
Sbjct: 490 EDANGLLNEMLERGLVPNRTTYE 512
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 181/397 (45%), Gaps = 45/397 (11%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y +T ++T+I L K A ALID M P L T T+ + C D+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV---VNGLCKRGDID 237
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNII 178
A++ ++ K + + ++ ALC YKNV DA +L NK + P N ++N +
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSL 296
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ CN G +A R+ +M +R I +VV+FS +I + K L + +L+D+M +
Sbjct: 297 IRCLCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I+ D Y+++I+ + +A + + M K PNVVTYN+LIK CKA++++E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 299 QAFDEMLQR-----------------------------------GISPTIRTYHAFLD-I 322
+ F EM QR G+ P I TY LD +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G E+ + E ++K +P TY ++I+ + + + + ++ +S G P+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT +I G EEA + EMKE LP T
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 180/407 (44%), Gaps = 47/407 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS S E++ +++ + K+ KFD +L + M+ L + ILI +C
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN---ILINCFCRRS 129
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKS 174
+ A+ + + I LL+ C K + +A L MF + + NT +
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME--YQPNTVT 187
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN +++G + + EA + M RG D+ ++ +++ K ++ L L +M
Sbjct: 188 FNTLIHGLF-LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC----- 289
++ IE D +Y +I AL + V DA++L M+ KG+ PNVVTYNSLI+ LC
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 290 ------------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K KL EA + +DEM++R I P I TY +
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 320 LD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
++ + +E + E M C P TY LIK F + ++ +++ E+S+ G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +Y LI LF G + A + + +M + P+ T +L D
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 142/334 (42%), Gaps = 49/334 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L ++ A L+ +M + P++VT L+ A G+ + A
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID------AFVKEGKLVEAEK 346
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGW 182
Y I + L++ C + + +A+H+ + +KD FP N ++N ++ G+
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGF 405
Query: 183 C----------------------NII------------GSSREAERVWMEMSQRGICYDV 208
C N + G A++++ +M G+ D+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++S ++ K L K L +F+ +++ +E D YN +I + K V+D L S
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE 327
+ KGV PNV+ Y ++I C+ +EA F EM + G P TY+ + +R G+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 328 EVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+ L++ MR G T M+I R
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM Q +V F+ ++S +K V+ L ++M+ + I D YN +I
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + + A++++ M + G P++VT +SL+ C +++ EA D+M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 311 PTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P T++ L + E L++ M GCQP TY ++ + +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + D YT +I AL + +A + EM K + P T
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 181/397 (45%), Gaps = 45/397 (11%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y +T ++T+I L K A ALID M P L T T+ + C D+
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV---VNGLCKRGDID 221
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNII 178
A++ ++ K + + ++ ALC YKNV DA +L NK + P N ++N +
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSL 280
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ CN G +A R+ +M +R I +VV+FS +I + K L + +L+D+M +
Sbjct: 281 IRCLCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I+ D Y+++I+ + +A + + M K PNVVTYN+LIK CKA++++E
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399
Query: 299 QAFDEMLQR-----------------------------------GISPTIRTYHAFLD-I 322
+ F EM QR G+ P I TY LD +
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G E+ + E ++K +P TY ++I+ + + + + ++ +S G P+
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT +I G EEA + EMKE LP T
Sbjct: 520 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 180/407 (44%), Gaps = 47/407 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS S E++ +++ + K+ KFD +L + M+ L + ILI +C
Sbjct: 57 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN---ILINCFCRRS 113
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKS 174
+ A+ + + I LL+ C K + +A L MF + + NT +
Sbjct: 114 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME--YQPNTVT 171
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN +++G + + EA + M RG D+ ++ +++ K ++ L L +M
Sbjct: 172 FNTLIHGLF-LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC----- 289
++ IE D +Y +I AL + V DA++L M+ KG+ PNVVTYNSLI+ LC
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290
Query: 290 ------------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K KL EA + +DEM++R I P I TY +
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350
Query: 320 LD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
++ + +E + E M C P TY LIK F + ++ +++ E+S+ G
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +Y LI LF G + A + + +M + P+ T +L D
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 49/342 (14%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+++I L ++ A L+ +M + P++VT L+ A
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID------AFVKE 322
Query: 120 GRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
G+ + A Y I + L++ C + + +A+H+ + +KD FP N +
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVT 381
Query: 175 FNIILNGWC----------------------NII------------GSSREAERVWMEMS 200
+N ++ G+C N + G A++++ +M
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
G+ D++++S ++ K L K L +F+ +++ +E D YN +I + K V+
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
D L S+ KGV PNV+ Y ++I C+ +EA F EM + G P TY+ +
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Query: 321 DI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+R G++ L++ MR G T M+I R
Sbjct: 562 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM Q +V F+ ++S +K V+ L ++M+ + I D YN +I
Sbjct: 47 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 106
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + + A++++ M + G P++VT +SL+ C +++ EA D+M
Sbjct: 107 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 166
Query: 311 PTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P T++ L + E L++ M GCQP TY ++ + +
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + D YT +I AL + +A + EM K + P T
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 188/401 (46%), Gaps = 23/401 (5%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
N A T+F K+ G + Y+ +I KV K A+ L+ EM+ P++VT
Sbjct: 21 NRLPEATTYFAKM-KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 79
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV------GIEDFQGLLSALCRYKNVQD 156
T+ +H R AYK F+ V + + LLS LCR + +
Sbjct: 80 YSTV---------IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 157 AEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
A L+ + + P + S++ ++ G C G A +V+ + S DVV++S +
Sbjct: 131 AYELLDEMRERGLQP-DKFSYDTLMAGLCKT-GKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I+ K L + +LF++M+ E D + A++ L KG +++A ++++ME++
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFG 331
PNV+TY+SLI LCK ++ +A++ F M+ RGI P + TY++ + + +
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L+E M GC P TY LI + + +++ ++ PD +Y+ LI
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFC 368
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+++ A + +M ++ +LP+ T L + N V+
Sbjct: 369 KLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 161/389 (41%), Gaps = 50/389 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT-----------------KQTLLILI 110
Y T+IA L K + D A L ++MR P +VT +Q L +
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 111 RRYCAVHDV------------GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNV 154
R C + + G+ +A +KR GIE + L+ C V
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM-IVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 155 QDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
A LM C D+ +NT +++G C G + EA R++ +M + DV
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNT-----LIDGLCKT-GRAPEANRLFGDMKAKFCNPDV 357
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++SC+I + K + LFD M + + D ++ ++ LV DA L++
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE 327
M +P+V TY SL+ CK ++ EAR+ M +RG P + TY A +D R G+
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 328 EV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYT 384
+ LLE M G QP TY LI F K+ + + N D +Y
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ L G++ A + +K+ P
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPP 566
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 20/358 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+++I D+A L++EM P ++T TL+ +
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID------GLCKT 335
Query: 120 GRA--INAFYAYKRFKFA-VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
GRA N + + KF + + L+ C+ + + A L + V P + +
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVT 394
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+ ++ G+CN G +AER+ EM DV +++ ++ + K + + R+ +M
Sbjct: 395 FSTLVEGYCNA-GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + + Y A+I A + A L++ M GV PNV+TY SLI C L
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 513
Query: 295 DEARQAFDEMLQR--GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+EAR+ E L+R + Y +D + RTG LLE++++ G P +D Y+
Sbjct: 514 EEARKML-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 572
Query: 350 MLIKKFSRWRQFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
LI+ + ++ G +V E++ + P+ +Y A+I L G+ EEA+ E+
Sbjct: 573 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 164/382 (42%), Gaps = 32/382 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y+T+++ L + D A+ L+DEMR P + TL+ + C
Sbjct: 105 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL---CKTG 161
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+ A+ F + + L++ LC+ + +A L C DV
Sbjct: 162 KIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV--- 218
Query: 172 TKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+F +++G C G +EA++V M R +V+++S +I K + +
Sbjct: 219 --TFTALMDGLCK--GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F +M GIE + YN++IH V A+ LM+ M G P+++TYN+LI LCK
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 334
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL---------DIIRTGEEVFGLLESMRKMGC 341
+ EA + F +M + +P + TY + D+ RT L + M K
Sbjct: 335 TGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART------LFDDMLKQAV 388
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P T+ L++ + + ++ E+ + PD +YT+L+ G++ EA +
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448
Query: 402 YYMEMKEKQLLPEPKTDELLQD 423
M ++ P T L D
Sbjct: 449 VLKRMAKRGCQPNVVTYTALID 470
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 9/256 (3%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M C K+V ++ I+++G C EA + +M ++G + +++ +I+ + K
Sbjct: 1 MECEKNVI-----TWTIMIDGLCKA-NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 54
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+H+ L +MK G+ + Y+ VIH + V A L + M E G PN+VT
Sbjct: 55 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 114
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMR 337
YN+L+ LC+ +DEA + DEM +RG+ P +Y + + +TG + + E
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
C P Y LI + + K++ ++ EN PD ++TAL+ L +L+
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 398 EAHQYYMEMKEKQLLP 413
EA Q M+++ P
Sbjct: 235 EAQQVLETMEDRNCTP 250
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK---FAVGI 138
D A L++EM + P + T +L + +C V GR + A KR +
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSL---VDGFCKV---GRMVEARRVLKRMAKRGCQPNV 462
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ L+ A CR A L+ V P N ++ ++ G+C G EA ++
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP-NVITYRSLIGGFCGT-GDLEEARKML 520
Query: 197 MEMSQRGIC-YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ + C D+ ++ ++ + + L L + +K+ G +Y A+I L +
Sbjct: 521 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 580
Query: 256 GRLVKDAISLMKSME-EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
G+ + A+ +++ M + PN Y ++I+ L + + +EA DE+L
Sbjct: 581 GKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 177/390 (45%), Gaps = 46/390 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG----------------------E 95
++GY Y +I+ L KV FD A+ L+ MR E
Sbjct: 38 EAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVE 97
Query: 96 TGPSLVTKQ---------TLLILIRRYCAVHDVGRAINAF--YAYKRFKFAVGIEDFQGL 144
L+ K T ++ R C + A+ A + K I +F +
Sbjct: 98 EARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF--V 155
Query: 145 LSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI--IGSSREAERVWMEMS 200
LS LC+ + V++A L + + P N ++N ++NG C I ++ E ++ EM+
Sbjct: 156 LSGLCQEEKVEEARLLFEKMVKQRINP-NVVTYNTLINGLCKAWRIETAYE---LFKEMA 211
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+G VS++ +I + K ++L +FD+M R + Y +I L+K V+
Sbjct: 212 GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 271
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A ++ M +KGV PNV TY+ LI CK R++DEA + ++M+ +GI+PT+ TY+ L
Sbjct: 272 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 331
Query: 321 DIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + E+ F L M + C PT TY L++ +Q +++ E+ G
Sbjct: 332 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 391
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y L L GK+ EA + +MK
Sbjct: 392 PDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ + I+++ C + G+ EA ++ M + +++S II+ K + +
Sbjct: 41 YTLRASGYGILISCLCKV-GNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA 99
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L ++M R D Y ++ L K + + DA++ ++ M +G+ P+ YN ++
Sbjct: 100 RELIEKMARYAPP-DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSG 158
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
LC+ K++EAR F++M+++ I+P + TY+ ++ + E + L + M G PT
Sbjct: 159 LCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT 218
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y LI F + + V++++ + P+ +YT LI L +GK++ A +
Sbjct: 219 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278
Query: 405 EMKEKQLLPEPKTDELLQD 423
M +K + P T L D
Sbjct: 279 GMVKKGVTPNVATYSCLID 297
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 5/237 (2%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M+ R + +F+ + ++KA L +V ++ M G Y +I L K
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A L+ +M K + Y+++I LCK +++EAR+ ++M R P TY
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + +T ++ +E M G +P Y ++ + + ++ ++ +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP-EPKTDELLQDWSYNKQFV 431
P+ +Y LI+ L ++E A++ + EM K +P E + L+ + K V
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 177/369 (47%), Gaps = 10/369 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + + + ++ +L K +F+ W + +EM PS++T TL I C D+
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTL---IDGCCRQGDL 198
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLMFCNKDVFPFNTKSFNI 177
RA F + + + L+ LC +++AE H V+P N ++N
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYP-NVYTYNT 257
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G+C + ++++A R++ +M G+ DVV+F +I K + LF M +
Sbjct: 258 LMDGYCKL-ANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKF 316
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + VYN++I A K V +A++L +E V+P+V TY+ LI+ LC + +EA
Sbjct: 317 SVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEA 376
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F++M + GI TY++ +D + G ++ + M + G +P T+ LI
Sbjct: 377 GNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + R +++E+ PD +YTA+I G ++EA + Y +M + + P
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496
Query: 415 PKTDELLQD 423
T L D
Sbjct: 497 CYTISCLLD 505
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 166/373 (44%), Gaps = 23/373 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y +I L K + A ++ MR P++ T TL+ YC + +
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM---DGYCKLANA 268
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNI 177
+A+ + + F L+ LC++ ++ A +L F N F N +N
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL-FVNMIKFSVTPNIAVYNS 327
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ +C + G EA +++E+ + + DV ++S +I + +F++M +
Sbjct: 328 LIDAYCKV-GDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI + YN++I K + A+ + M E GV PNV+T+++LI CK R L A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ EM+ + +SP + TY A +D + +E L M G P T L+
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDG 506
Query: 355 FSRWRQFGNVFKVWNE----------ISENGNGP---DRSSYTALIHALFLNGKLEEAHQ 401
+ + + +++ E + G+ P + +YTALIH L +G+ +A +
Sbjct: 507 LCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVK 566
Query: 402 YYMEMKEKQLLPE 414
+ +M+ L P+
Sbjct: 567 LFSDMRRYGLQPD 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 160/359 (44%), Gaps = 31/359 (8%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A ++ G + Y+T++ K+ A L +M G P +VT ILI C
Sbjct: 242 AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT---FGILIDGLC 298
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVF 168
++ A N F +F I + L+ A C+ +V +A L + DVF
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF 358
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+++I++ G C++ + EA ++ +M++ GI + V+++ +I K + K L
Sbjct: 359 -----TYSILIRGLCSV-SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ QM G+E + ++ +I K R ++ A+ + M K ++P+VVTY ++I
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE-------------S 335
CK + EA + + +ML GI+P T LD + ++ LE +
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 532
Query: 336 MRKMGCQP--TNDT-YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ G +P TN Y LI + QF K+++++ G PD Y ++ LF
Sbjct: 533 VDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 111/295 (37%), Gaps = 59/295 (20%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I KV A AL E+ E P + T ILIR C+V A N F
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYS---ILIRGLCSVSRTEEAGNIFE 381
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWC 183
+ + L+ C+ + A L C++ V P N +F+ +++G+C
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKA--LEICSQMTENGVEP-NVITFSTLIDGYC 438
Query: 184 NI----------------------------------IGSSREAERVWMEMSQRGICYDVV 209
I GS +EA +++ +M GI +
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498
Query: 210 SFSCIISCYSKARNLHKVLRLFD-----QMKRMGIEC--------DRKVYNAVIHALAKG 256
+ SC++ K + L LF Q R ++ + Y A+IH L +
Sbjct: 499 TISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQD 558
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
A+ L M G+ P+ V Y +++ L + + + A +ML+ G+ P
Sbjct: 559 GQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHA--DMLKFGVIP 611
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 193 ERVWMEMSQRGICYDVVSFSCI-----ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ V + + G VVS S + I+ R+ K L F+ I+ +Y+
Sbjct: 7 KSVLVRIGLNGTMLQVVSLSSLTPDSLITTVLNCRSPWKALEFFNAAPEKNIQ----LYS 62
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGV------------------------APNVVTYNS 283
A+IH L +L+ A L+ + + V PNV Y
Sbjct: 63 AIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGE 120
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMG 340
LI LCK ++EA + ++ G + TI+ + L + ++TG E ++ + E M G
Sbjct: 121 LIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNG 177
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+ T+ LI R ++++E+ G P YT LI L + K+EEA
Sbjct: 178 LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAE 237
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
+ M+E + P T L D Y K +Q +L+ +Q G+
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMD-GYCKLANAKQ--ALRLYQDMLGE 281
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 11/366 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY+ Y+T++ KV + D A + D P +VT L I +C
Sbjct: 38 KAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNAL---INGFCKAD 94
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ A + + L++ LC+ V +A L+ +K P N +++
Sbjct: 95 KLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIV-DKGFSP-NVITYST 152
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C + EA +++ + ++G +V +++ +I K +++ LF + +
Sbjct: 153 LISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 212
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E D Y I L K V+DA+ ++K M+EKG P+VV++N++I LCK +++DEA
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
M +G SP +++ + R G ++ + M K G +PT TY +L+
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332
Query: 355 FSRWRQFGNV---FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ RQ G + +++ + E G PD +Y+ALI L GKL++A + M+ K
Sbjct: 333 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 392
Query: 412 LPEPKT 417
+P T
Sbjct: 393 IPNVYT 398
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 130/248 (52%), Gaps = 8/248 (3%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N +L+G CN G +A+ ++ M + G DVV+++ ++ + K L + L++
Sbjct: 9 NRITYNALLSGLCNG-GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD + G D YNA+I+ K + +A +++ M + + P+VVTYNSL+ LCK
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDI----IRTGEEVFGLLESMRKMGCQPTND 346
++DEAR ++ +G SP + TY + +R E L S+ K G +P
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +LI + + F++++ + ++G PD +YT I L G++E+A +M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244
Query: 407 KEKQLLPE 414
EK +P+
Sbjct: 245 DEKGCVPD 252
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 136/298 (45%), Gaps = 18/298 (6%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S L+S + +R EA F KQ GY Y+ +I L K + + A+ L
Sbjct: 151 STLISGLCRELRGVSEA-LKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF---QGLLSA 147
+ P +T + I C GR +A K + D +++
Sbjct: 209 LVKHGLEPDAITYT---VFIDGLCKA---GRVEDALLMLKDMDEKGCVPDVVSHNAVING 262
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ K V +AE L+ K P N SFN ++ G C G ++A + EM +RG+
Sbjct: 263 LCKEKRVDEAEVLLSGMEAKGCSP-NAISFNTLICGQCRA-GKWKKAMTTFKEMLKRGVK 320
Query: 206 YDVVSFSCIISCYSKARN---LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
VV+++ ++ KAR + + + LFD M G D Y+A+I L K + DA
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
L+ +ME KG PNV TYNSLI LC K+DEA + F M+++G P TY +
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 161/392 (41%), Gaps = 55/392 (14%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
+ + A F A K+ G+ Y+ +I K K D A ++ M P +VT
Sbjct: 59 GELDEALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLM 161
+L + C GR A F+ + + L+S LCR + V +A L
Sbjct: 118 YNSL---VNGLCKN---GRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171
Query: 162 FCN-KDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCY 218
K + ++NI+++G ++ R EA ++ + + G+ D ++++ I
Sbjct: 172 GSVLKQGYEPEVPTYNILIDG---LLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 228
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
KA + L + M G D +NAVI+ L K + V +A L+ ME KG +PN
Sbjct: 229 CKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 288
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----------------- 321
+++N+LI C+A K +A F EML+RG+ PT+ TY+ +D
Sbjct: 289 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 348
Query: 322 ---IIRTG---------------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+I G ++ LL +M GC P TY LI
Sbjct: 349 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ +++ + E G PD +Y +I A
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 17/413 (4%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHST 65
LRE S +R + I + L+ ++ WV W+ F +SG +
Sbjct: 170 LREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV-----KSGNIVNV 224
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ M+ L K K D + EM LVT TL + YC V A
Sbjct: 225 YTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTL---VNAYCRRGLVSEAFGL 281
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
G+ + L++ LC+ + + A+ ++ + P N +FN +L C
Sbjct: 282 VDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP-NAATFNPMLVESC 340
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
EAERV+ EM QRG+ D++SFS I+ +S+ L + L F++MK +G+ D
Sbjct: 341 RK-EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDT 399
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+Y +I+ + V A+ + M E+G +VVTYN+L+ LC+ + LD+A + F E
Sbjct: 400 VIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE 459
Query: 304 MLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M++RG+ P T + + G + L E+M +P TY L+ F + +
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++W ++ P S++ LI+ G + EA + + EMKEK + P
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 173/377 (45%), Gaps = 12/377 (3%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WEA F Q G + +++ + + + A A ++M+G P V
Sbjct: 346 WEAERVFNEML--QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
ILI YC DV A+ + + + LL+ LCR K + DA+ L
Sbjct: 404 ---ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ VFP + + +++G+C G+ +A ++ M+ R + DVV+++ ++ + K
Sbjct: 461 VERGVFP-DFYTLTTLIHGYCKD-GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ K L+ M I ++ +I+ LV +A L M+EKG+ P +VT N
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKM 339
++IK +A L +A + M+ G+ P TY+ ++ E F L+ +M +
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P TY ++ FSR + V +++ + G PD+S+YT+LI+ ++EA
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698
Query: 400 HQYYMEMKEKQLLPEPK 416
+ + EM ++ +P+ K
Sbjct: 699 FRVHDEMLQRGFVPDDK 715
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 146/358 (40%), Gaps = 46/358 (12%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
+LIR Y + AF ++ F V I LL A+ + V A E +
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
V N + NI++N C G EM ++G+ D+V+++ +++ Y +
Sbjct: 219 GNIV---NVYTLNIMVNALCKD-GKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + L D M G++ YNA+I+ L K + A ++ M G+ PN T+N
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMG 340
++ C+ + EA + F+EMLQRG+ P + ++ + + + R GE E M+ +G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG------------NG----------- 377
P Y +LI + R K+ NE+ E G NG
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 378 ------------PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD + T LIH +G + +A + M + L P+ T L D
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 38/245 (15%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F +I Y +AR L + F +++ G NA++ A+ K V A + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG 326
+ G NV T N ++ LCK KLD EM ++G+ + TY+ ++ R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF------------------GNVF- 365
E FGL++ M G +P TY LI + + F
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 366 ----------------KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+V+NE+ + G PD S+++++ NG+L A Y+ +MK
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 410 QLLPE 414
L+P+
Sbjct: 394 GLVPD 398
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 180/425 (42%), Gaps = 61/425 (14%)
Query: 47 AAFTFFLWAGKQSGYAHSTRE---------YHTMIAILGKVRKFDTAWALIDEMRGGETG 97
A + AG+ RE Y ++I L K K D A+ L+DEMR
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P + + IR C G A+ F K I F L+ AL + V++A
Sbjct: 63 PGVAVHNGV---IRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 158 EHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+ M + P N ++ ++NG C R E + + M++ G C +V+++S +
Sbjct: 120 FQIFESMHTSSQCLP-NVVTYTTVINGLCKDGKLDRAIELLDL-MNETGCCPNVITYSVL 177
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+ KA K L +M R G + D +YN +++ L K R + +A+ L++ M G
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------------- 320
P VVTYNSL++ C+++++D A + M +RG P + Y+ +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 321 ------------DIIRTGEEVFGL------------------LESMRKMGCQPTNDTYIM 350
D+I + GL LE M++ GC P TY +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I+ R R+ + + ++ PD SS++ +I +L + L+ A++ + M E++
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 411 LLPEP 415
P P
Sbjct: 418 CKPNP 422
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 13/295 (4%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ LC+ + A L+ +D P N ++ G C G +A + +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKA-GRFGDALGYFKTV 91
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKGR 257
+ D+++F+ ++ K+ + + ++F+ M +C V Y VI+ L K
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS-QCLPNVVTYTTVINGLCKDG 150
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ AI L+ M E G PNV+TY+ L++ LCKA + D+ EM +RG P + Y+
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+ + R +E L++ M + GC PT TY L++ F R +Q F++ +SE
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDW 424
G PD +Y +I L + +L++A +M + +P+ T D L +DW
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y ++ L K + D + L+ EM P ++ TLL C
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL---NGLCKSR 220
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+ A+ R + + L+ CR K V A L+ C DV +N
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280
Query: 172 TKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKAR------N 223
T ++ G C +R +A+ + +M DV+++S II K
Sbjct: 281 T-----VIAGLCR---DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L + + MK+ G + Y VI L + R + A++L++ M + V P++ +++
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE------VFGLL-ESM 336
+I LCK+ LD A + F M +R P Y A +D + G E VF L+ ES
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
R P TY ++ + ++ + PD +SY ALI L +
Sbjct: 453 R-----PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 397 EEAHQYYMEMKEK 409
EEA++ + ++ K
Sbjct: 508 EEAYELFQAVEAK 520
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 16/278 (5%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++ +I KA L + L D+M+ GI V+N VI L K DA+ K++
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-LQRGISPTIRTYHAFLD-IIRTG- 326
P+++T+N L+ L K+ +++EA Q F+ M P + TY ++ + + G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ LL+ M + GC P TY +L++ + + F + E++ G PD Y
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER-----QIASLK 439
L++ L + +L+EA + M P T + L++ + +KQ V+R Q+ S +
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ-VDRAFRLIQVMSER 270
Query: 440 AHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRVV 472
P VI+ + D + L+Q R V
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 17/232 (7%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ L + A+ L + EE+ V PN TY SLI LCKA KLD+A + DEM
Sbjct: 2 NCALNLLVRAGQHGQAVQLFR--EERCV-PNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 307 RGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RGI P + ++ + + + G + G +++ C P T+ +L+ + +
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 364 VFKVWNEISENGNG-PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----- 417
F+++ + + P+ +YT +I+ L +GKL+ A + M E P T
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 418 DELLQDWSYNKQFVERQIASLKAHQP-----QSGQNTRVISKKSDQDREFLQ 464
+ L + +K F Q + + QP + N S++ D+ E +Q
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 125/272 (45%), Gaps = 14/272 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR---RYC 114
+ G Y+T+IA L + + D A AL+ +M P ++T T++ + R
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
A + A K+ + ++ LCR + Q A L+ + +V P +
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DL 387
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
SF++++ C A +++ MS+R + V+++ +I SK + K +R+F+
Sbjct: 388 SSFSMVIGSLCKS-HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 233 QMK---RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
M R G+ YN+V+ L +++A+ +++ M K P+ +Y +LI+ LC
Sbjct: 447 LMVESFRPGV----ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ ++EA + F + +G + + Y+ ++
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 13/356 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L + D A AL+ M + +L+R CA +A+
Sbjct: 80 YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + + L+ LC V A LM C + P N ++ +L G+C
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP-NVVVYSSLLQGYCKS 198
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + +V++EMS++GI DVV ++ +I K K + D M R G+E +
Sbjct: 199 -GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ + K VK+AI ++K M EKGVAP+VVTYN+LIK L ++DEA +EM+
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 306 QRG---ISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
RG + P + T+++ + DI R + F + M + GC TY +LI R
Sbjct: 318 -RGKNIVKPNVVTFNSVIQGLCDIGRM-RQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ ++ +E++ G PD +Y+ LI +++ A M+++ + PE
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 24/416 (5%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K E+ ++ E GI+ + + S +L WE F+ ++ G Y +
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK-GIEPDVVMYTGL 226
Query: 72 IAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
I L KV K A ++D M RG E P++VT +LI C V AI
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLE--PNVVTYN---VLINCMCKEGSVKEAIGVLKKM 281
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNII 186
A + + L+ L + +A L M K++ N +FN ++ G C+I
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI- 340
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G R+A +V M + G ++V+++ +I + + K + L D+M +G+E D Y
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ +I K V A L+ +M ++G+ P + Y L+ +C+ ++ AR F+EM
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-D 459
Query: 307 RGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ Y + ++T +E LL+S+ G P TY ++I F++
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKE---LLKSIVDEGLTPDAVTYSIVINMFAKSGD 516
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
V +++ +G PD + + +LI G++ + + EM K + + K
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ AL RL A+ L++SM GV +VVTY +LI+ LC A ++D+A + EM
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ GI P + Y + LL+ K G RW G VF
Sbjct: 178 ESGIEPNVVVYSS-------------LLQGYCKSG----------------RWEDVGKVF 208
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
E+SE G PD YT LI +L GK ++AH M + L P T +L +
Sbjct: 209 V---EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265
Query: 426 YNKQFVERQIASLK 439
+ V+ I LK
Sbjct: 266 CKEGSVKEAIGVLK 279
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 49/320 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE--TGPSLVTKQTLLILIRRYCA 115
+ G A Y+T+I L V + D A L++EM G+ P++VT ++ I+ C
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV---IQGLC- 338
Query: 116 VHDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
D+GR AF + V + + L+ L R V+ A LM + + P
Sbjct: 339 --DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP- 395
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI--------------C----------- 205
++ +++I++ G+C + R AE + M RGI C
Sbjct: 396 DSFTYSILIKGFCKMWQVDR-AEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454
Query: 206 ---------YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
DVV++S +I KA +L L + G+ D Y+ VI+ AK
Sbjct: 455 FNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A ++K M G P+V ++SLI+ ++++ + EM+ + I+ +
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKII 574
Query: 317 HAFLDIIRTGEEVFGLLESM 336
+ E LL+S+
Sbjct: 575 STLSTSLVASNEGKALLQSL 594
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 80/411 (19%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H R T I ++ + + A AL+D G + G Y A+
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGA--------------YTAL--- 178
Query: 120 GRAINAFYAYKRFKFAVGIEDFQ-----GLLSALCRYKNV-----------QDAEHLMFC 163
++AF RF+ AV + F+ G+ A+ Y V ++ L+
Sbjct: 179 ---VSAFSRAGRFRDAVAV--FRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 164 NKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K+ V P + ++N +++ C +EA +V+ EM G D V+F+ ++ Y KA
Sbjct: 234 MKEHGVAP-DRYTYNTLIS-CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKA 291
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + + +M+R+G YN++I + K L++ A++L + ME KG+ P+VVTY
Sbjct: 292 RRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTY 351
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL--------------------- 320
+LI L +A K+D A +DEM++ G P + TY+A +
Sbjct: 352 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 411
Query: 321 -----DIIR------------TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
DI+ EV G+ + M+K G P DTY+ LI +SR F
Sbjct: 412 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 471
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ + E G PD S+Y A++ AL G+ E+A + + EM+E+ P+
Sbjct: 472 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 180/451 (39%), Gaps = 79/451 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI------LI 110
K SG+ +++++ + GK R+ D A +I EM PS+VT +L+ L+
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329
Query: 111 RRYCAVH----------DVGRAINAFYAYKRF-KFAVGIEDF-----QGLLSALCRYKNV 154
+ A+ DV R K I ++ G LC Y
Sbjct: 330 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY--- 386
Query: 155 QDAEHLMFCNKDVFP--------FNTKSFNIILNGWCNII------GSSREAERVWMEMS 200
+A M + FP F + F + W ++ G E V+ EM
Sbjct: 387 -NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 445
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G + ++ +IS YS+ ++++ +M GI D YNAV+ ALA+G +
Sbjct: 446 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------------------- 295
A L MEE+ P+ +Y+SL+ A++LD
Sbjct: 506 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Query: 296 ----------EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
EA +AF E+ Q+ S I +A + I R +V +L M++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ TY L+ +SR + EI +G PDR SY +I+A G+++EA +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685
Query: 403 YMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ EMK L P+ T + ++ + N F E
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 716
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 147/344 (42%), Gaps = 25/344 (7%)
Query: 30 SSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
S+ V ++++W +N ++ + K++GY Y ++I+ + FD
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + M P + T +L + R GR A + + D
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARG------GRWEQAEKLFAEMEERDCKPDEY 524
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN------IILNGWCNIIGSSREAERVW 196
S L Y N + + + + D++ + N +++N N + EAE+ +
Sbjct: 525 SYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA---EAEKAF 581
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+E+ Q+ D+ + ++S Y K R + KV ++ MK I YN+++H ++
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +++ ++ GV P+ +YN++I + ++ EA + F EM G+ P + TY
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 317 HAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ F+ + EE L+ M GC+P TY +++ + R
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 43/248 (17%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
E+ G+ + + I ++A L + L D D Y A++ A ++
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP----GPDAGAYTALVSAFSRAG 186
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSL-------------------------IKP----- 287
+DA+++ + M + GV P +VTYN + + P
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 288 -----LCKARKL-DEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRK 338
C+ R L EA Q FDEM G P T+++ LD+ R +E +++ M +
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+GC P+ TY LI + + + E+ G PD +YT LI L GK++
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 366
Query: 399 AHQYYMEM 406
A Y EM
Sbjct: 367 AIVEYDEM 374
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ D AL D++ P +TL+++ + V+++ A AF
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK---VNNLAEAEKAFL 582
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
++ + ++ I ++S + + V+ E ++ K+ + ++N +++ + +
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL- 641
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + E + E+ G+ D S++ +I Y + + + RLF +MK G++ D Y
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
N + + + ++AI L++ M +G PN TYNS+++ C+ KL +A+
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 169/391 (43%), Gaps = 19/391 (4%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
V+ +V V S + W+ + + K+ G A Y+T+I+ + + A +
Sbjct: 208 VTYNVVLHVYSKMAVPWKEVVEL-VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVF 266
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
DEM+ P VT +LL + + HD AI +R + + L+S+
Sbjct: 267 DEMKASGFEPDKVTFNSLLDVYGK-ARRHD--EAIEVIQEMERVGCPPSVVTYNSLISSY 323
Query: 149 CRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+ ++ A L K + P + ++ +++G + G A + EM + G
Sbjct: 324 VKDGLLEQAVALKQEMEVKGMKP-DVVTYTTLISGL-DRAGKIDAAIVEYDEMVRNGCKP 381
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++ +++ +I + +++ +FD+ + G D +N ++ + L + +
Sbjct: 382 NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVF 441
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
K M++ G P TY SLI + D A Q + M++ GI P + TY+A L + G
Sbjct: 442 KEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARG 501
Query: 327 ---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E+ L M + C+P +Y L+ ++ ++ + + ++I P +
Sbjct: 502 GRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEP----H 557
Query: 384 TALIHALFL-NGK---LEEAHQYYMEMKEKQ 410
L+ L L N K L EA + ++E+++K+
Sbjct: 558 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ +V I +A+ + +A +L+ + P+ Y +L+ +A + +A
Sbjct: 136 GVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDA 191
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
F M+ G+ P I TY H + + +EV L+ SM++ G P TY LI
Sbjct: 192 VAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLIS 251
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + +V++E+ +G PD+ ++ +L+ + +EA + EM+ P
Sbjct: 252 CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPP 311
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T L SY K + Q +LK G V++
Sbjct: 312 SVVTYNSLIS-SYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 19/376 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+G + EY+ +I K + D A L +EM PS+ T +LL +C
Sbjct: 36 DNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLL---NAFCKET 92
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPF 170
+ A+ F F + + ++S LC+ V +A ++F C+
Sbjct: 93 KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSA----- 147
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT ++N ++NG C R A ++ EM+ +G D ++++ I+S + + + +
Sbjct: 148 NTVAYNALINGLCKDENIER-AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQF 206
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD M G D YN ++ AL K +A+ L K + KG P+ VTYNS++ L +
Sbjct: 207 FDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDT 347
+DEA + F +M+ G +P TY L + ++ +LE M K+G P T
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ + ++++ + +NG PD SY+ +++ L K+ +A + M
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386
Query: 408 EKQLLPEPKTDELLQD 423
E++L+P+ T +L D
Sbjct: 387 ERKLVPDVVTFNILMD 402
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +F ++L +C G R+ +++ +M GI D + ++ +I Y+K + + RL
Sbjct: 7 NRYTFRVVLKSFCKQ-GKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+++M +G+E YN++++A K +K+A+ L K+M EKG P+VVTY+++I LCK
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 291 ARKLDEARQA-FDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTND 346
K+ EA + F +M++RG S Y+A ++ + E + + LLE M G P N
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++ R + + ++ + G PD +Y L+ AL+ GK +EA + + ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 407 KEKQLLPEPKT 417
K +P+ T
Sbjct: 246 IAKGYMPDTVT 256
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 165/361 (45%), Gaps = 11/361 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y++++ K K A L M P +VT T+ I C V
Sbjct: 73 GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI---ISGLCKTGKV 129
Query: 120 GRAINA-FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A+ F+ + + L++ LC+ +N++ A L+ +K P N ++N
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI-TYN 188
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
IL+G C + G EA++ + M RG DVV+++ ++ K + ++LF +
Sbjct: 189 TILSGLCRM-GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D YN+++ LA+ + +A + K M G APN TY+ ++ C+A+K+D+
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + +EM + G P + TY+ LD + +T ++ L +M GC P +Y +++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + +++ + E PD ++ L+ L GKL+EA +M P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Query: 414 E 414
+
Sbjct: 428 D 428
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 14/325 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + +T Y+ +I L K + A+ L++EM P +T T+L C +
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTIL---SGLCRMG 198
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTK 173
V A F + ++ + + GLL AL + +A L KDV + +T
Sbjct: 199 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF---KDVIAKGYMPDTV 255
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N IL G + EAE ++ +M G + ++S ++S + +A+ + ++ ++
Sbjct: 256 TYNSILLGLARK-SNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M ++G D YN ++ L K LV A L +M + G AP++V+Y+ ++ LCK K
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ +AR FD M++R + P + T++ +D + + G +E LL+ M GC P Y
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 351 LIKKFSRWRQFGNVFKVWNEISENG 375
L+ + + ++ + E G
Sbjct: 435 LMNGLRKQGRHIQADRLTQAMKEKG 459
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFG 331
+PN T+ ++K CK KL + + F++ML GISP Y+ +D + G +E
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L E M +G +P+ TY L+ F + + +++ ++E G PD +Y+ +I L
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 392 LNGKLEEA 399
GK+ EA
Sbjct: 125 KTGKVTEA 132
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
C P T+ +++K F + + + +K++ ++ +NG PD Y LI G+++EA+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 401 QYYMEMKEKQLLP 413
+ Y EM L P
Sbjct: 64 RLYEEMVSVGLEP 76
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM + +VT L +I
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMV--RSPICVVTPMELSQVI 166
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R +G+AI FY K K + + ++ L +Y+ V + + M
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P +T +++ +++ +C + G A R+ EM + G+ ++ IIS + K N+H
Sbjct: 227 HP-DTVTYSALISAFCKL-GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ M D Y +I L K + +A M+ + P+ V N++I
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINF 344
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE----EVFGLLESMRKMGCQP 343
L KA +LD+ + F+EM P + TY+ + + + EVF E M+ G P
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 404 MEMKE 408
E+KE
Sbjct: 465 QELKE 469
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 172/383 (44%), Gaps = 17/383 (4%)
Query: 60 GYAHS-TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G+ H T Y +I+ K+ + D+A L++EM+ P T + ++I + + +
Sbjct: 224 GHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQP---TAKIYTMIISLFFKLDN 280
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
V A++ F + + + L+ L + + +A H ++ + K ++
Sbjct: 281 VHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFY---HEMQREDCKPDTVV 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N N +G + + +++ EM +VV+++ II SK+R + +V F++
Sbjct: 338 MNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSR-VSEVFSWFER 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK GI Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++
Sbjct: 397 MKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
D A + F E+ + S + R Y + + + G ++ L + M K+GC P Y
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNA 516
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ +R ++ E+G PD +SY +++ L G A + MK
Sbjct: 517 LMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576
Query: 411 LLPEPKT-DELLQDWSYNKQFVE 432
+ P+ + + +L S+ F E
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEE 599
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 178/398 (44%), Gaps = 39/398 (9%)
Query: 20 NKIEECGIKVSSELVSEVLS--WVRNDWEAAFTFFLWAGKQSGYAHSTRE---YHTMIAI 74
N+++E G++ ++++ + ++S + ++ A + F ++ Y + + Y +I
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF----EEMRYMYCRPDVFTYTELIRG 309
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
LGK + D A+ EM+ + P V ++ + + GR + ++
Sbjct: 310 LGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGK------AGRLDDGLKLFEEMGV 363
Query: 135 AVGIED---FQGLLSALCRYKN-VQDA----EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ I + + ++ AL K+ V + E + PF +++I+++G+C
Sbjct: 364 SHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPF---TYSILIDGFCK-- 418
Query: 187 GSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ E+ M EM ++G ++ +I KA+ LF ++K
Sbjct: 419 --TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+VY +I L K + DAI+L M + G PNV YN+L+ L +A LDEA +
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M + G P I +Y+ L+ + +TG +L +M+ +P +Y ++ S
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
F ++ E++ G D +Y++++ A+ GK+++
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEAI---GKVDQ 631
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC + S +I A+ + K + +F Q+K + + YN++I L
Sbjct: 148 EMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHE 207
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A + +EM + G+ PT +
Sbjct: 208 GQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + + V G L E MR M C+P TY LI+ + + + ++E+
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PD +I+ L G+L++ + + EM +P
Sbjct: 328 REDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIP 368
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-YNAVIHALAKGRLV 259
+R +D ++ +I C ++ ++ +M R I + + VI L +++
Sbjct: 116 KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMI 175
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHA 318
AI++ ++ + P YNS+I L + ++ + ++EM G P TY A
Sbjct: 176 GKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSA 235
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + G + LL M++ G QPT Y M+I F + ++ E+
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +YT LI L G+++EA+ +Y EM+ + P+
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPD 334
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 80/411 (19%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H R T I ++ + + A AL+D G + G Y A+
Sbjct: 118 GVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGA--------------YTAL--- 160
Query: 120 GRAINAFYAYKRFKFAVGIEDFQ-----GLLSALCRYKNV-----------QDAEHLMFC 163
++AF RF+ AV + F+ G+ A+ Y V ++ L+
Sbjct: 161 ---VSAFSRAGRFRDAVAV--FRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 164 NKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K+ V P + ++N +++ C +EA +V+ EM G D V+F+ ++ Y KA
Sbjct: 216 MKEHGVAP-DRYTYNTLIS-CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKA 273
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + + +M+R+G YN++I + K L++ A++L + ME KG+ P+VVTY
Sbjct: 274 RRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTY 333
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL--------------------- 320
+LI L +A K+D A +DEM++ G P + TY+A +
Sbjct: 334 TTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRS 393
Query: 321 -----DIIR------------TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
DI+ EV G+ + M+K G P DTY+ LI +SR F
Sbjct: 394 AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL 453
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ + E G PD S+Y A++ AL G+ E+A + + EM+E+ P+
Sbjct: 454 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 504
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 180/451 (39%), Gaps = 79/451 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI------LI 110
K SG+ +++++ + GK R+ D A +I EM PS+VT +L+ L+
Sbjct: 252 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 311
Query: 111 RRYCAVH----------DVGRAINAFYAYKRF-KFAVGIEDF-----QGLLSALCRYKNV 154
+ A+ DV R K I ++ G LC Y
Sbjct: 312 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY--- 368
Query: 155 QDAEHLMFCNKDVFP--------FNTKSFNIILNGWCNII------GSSREAERVWMEMS 200
+A M + FP F + F + W ++ G E V+ EM
Sbjct: 369 -NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 427
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G + ++ +IS YS+ ++++ +M GI D YNAV+ ALA+G +
Sbjct: 428 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 487
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------------------- 295
A L MEE+ P+ +Y+SL+ A++LD
Sbjct: 488 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 547
Query: 296 ----------EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
EA +AF E+ Q+ S I +A + I R +V +L M++
Sbjct: 548 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 607
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ TY L+ +SR + EI +G PDR SY +I+A G+++EA +
Sbjct: 608 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 667
Query: 403 YMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ EMK L P+ T + ++ + N F E
Sbjct: 668 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEE 698
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 147/344 (42%), Gaps = 25/344 (7%)
Query: 30 SSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
S+ V ++++W +N ++ + K++GY Y ++I+ + FD
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + M P + T +L + R GR A + + D
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALAR------GGRWEQAEKLFAEMEERDCKPDEY 506
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN------IILNGWCNIIGSSREAERVW 196
S L Y N + + + + D++ + N +++N N + EAE+ +
Sbjct: 507 SYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA---EAEKAF 563
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+E+ Q+ D+ + ++S Y K R + KV ++ MK I YN+++H ++
Sbjct: 564 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 623
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +++ ++ GV P+ +YN++I + ++ EA + F EM G+ P + TY
Sbjct: 624 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 683
Query: 317 HAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ F+ + EE L+ M GC+P TY +++ + R
Sbjct: 684 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 43/248 (17%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
E+ G+ + + I ++A L + L D D Y A++ A ++
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP----GPDAGAYTALVSAFSRAG 168
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSL-------------------------IKP----- 287
+DA+++ + M + GV P +VTYN + + P
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 228
Query: 288 -----LCKARKL-DEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRK 338
C+ R L EA Q FDEM G P T+++ LD+ R +E +++ M +
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+GC P+ TY LI + + + E+ G PD +YT LI L GK++
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 348
Query: 399 AHQYYMEM 406
A Y EM
Sbjct: 349 AIVEYDEM 356
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ D AL D++ P +TL+++ + V+++ A AF
Sbjct: 508 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSK---VNNLAEAEKAFL 564
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNII 186
++ + ++ I ++S + + V+ E ++ K+ + ++N +++ + +
Sbjct: 565 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL- 623
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + E + E+ G+ D S++ +I Y + + + RLF +MK G++ D Y
Sbjct: 624 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 683
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
N + + + ++AI L++ M +G PN TYNS+++ C+ KL +A+
Sbjct: 684 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ +V I +A+ + +A +L+ + P+ Y +L+ +A + +A
Sbjct: 118 GVLHHPRVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDA 173
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
F M+ G+ P I TY H + + +EV L+ SM++ G P TY LI
Sbjct: 174 VAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLIS 233
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + +V++E+ +G PD+ ++ +L+ + +EA + EM+ P
Sbjct: 234 CCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPP 293
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T L SY K + Q +LK G V++
Sbjct: 294 SVVTYNSLIS-SYVKDGLLEQAVALKQEMEVKGMKPDVVT 332
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 178/365 (48%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y+ ++ L ++ K A L+ M P +V+ T+ I YC V
Sbjct: 103 QLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI---IDGYCHVG 159
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ + + + + + ++ LC+ V + E ++ + VFP + +
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP-DHVIY 218
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G+C + G+++ A +++ EM R I D ++FS +I S + + + +LF++M
Sbjct: 219 TTLIDGFCKL-GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G E D Y A+I K +K A L M + G+ PNVVTY +L LCK+ +LD
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
A + EM ++G+ I TY+ ++ + + G + L+E M++ G P TY L+
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + ++ E+ + G P ++ L++ L ++GKLE+ + M EK ++
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 413 PEPKT 417
P T
Sbjct: 458 PNAAT 462
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 173/380 (45%), Gaps = 24/380 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA-- 125
Y T+I K+ A+ L EM E P + L+ C + G+ + A
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALI------CGLSGSGKVVEADK 271
Query: 126 -FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGW 182
F + F + L+ C+ ++ A H + P N ++ + +G
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP-NVVTYTALADGL 330
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G A + EM ++G+ ++ +++ I++ KA N+ + ++L ++MK G+ D
Sbjct: 331 CKS-GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389
Query: 243 RKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y ++ A K G +VK A L++ M ++G+ P VVT+N L+ LC + KL++ +
Sbjct: 390 TITYTTLMDAYYKTGEMVK-ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448
Query: 302 DEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
ML++GI P TY++ + + +R E++ M G P ++TY +LIK
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY---RGMCAQGVVPDSNTYNILIKGH 505
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ R + + E+ E SSY ALI F KL EA Q + EM+ + L+
Sbjct: 506 CKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASA 565
Query: 416 KTDELLQDWSYNKQFVERQI 435
+ L D +Y + +E +
Sbjct: 566 EIYNLFVDMNYEEGNMETTL 585
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 39/256 (15%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT+S+NI++N + G REA + M M +G DVVS++ II Y L KV
Sbjct: 109 NTESYNILMNSLFRL-GKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV--- 164
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ L+K M+ KG+ PN+ TY+S+I LCK
Sbjct: 165 --------------------------------VQLVKEMQLKGLKPNLYTYSSIILLLCK 192
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+ K+ E + EM++RG+ P Y +D + G + + L M P +
Sbjct: 193 SGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIA 252
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ LI S + K++NE+ + G PD +YTALI G++++A + +M
Sbjct: 253 FSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312
Query: 408 EKQLLPEPKTDELLQD 423
+ L P T L D
Sbjct: 313 QIGLTPNVVTYTALAD 328
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 48/270 (17%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+T++ L K A L++EM+ P +T TL+ A +
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMD------AYY 401
Query: 118 DVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
G + A + + F L++ LC ++D E L+ K + P N
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP-NA 460
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N I+ +C I + R + ++ M +G+ D +++ +I + KARN+
Sbjct: 461 ATYNSIMKQYC-IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM-------- 511
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
K+A L K M EK +YN+LIK K +
Sbjct: 512 ---------------------------KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
KL EARQ F+EM + G+ + Y+ F+D+
Sbjct: 545 KLLEARQLFEEMRREGLVASAEIYNLFVDM 574
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 33/150 (22%)
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
L+ + ++ G P+V ++ + L +A L+EAR+ FD++L G++ + + + +L +
Sbjct: 28 LIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLS 85
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ ++ G M++K FS + Q G WN SY
Sbjct: 86 SKRDMLG------------------MVLKVFSEFPQLG---VCWN----------TESYN 114
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
L+++LF GK+ EAH M M+ K +P+
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 177/352 (50%), Gaps = 14/352 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + + A+ L EM P +T TL I +C + G+ + AF
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL---IYGFCLL---GQLMGAFS 206
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWC 183
G+ + L++ALC+ NV++A++L+ K+ +++ +++G+C
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
++G + A++++ M Q G+ +V S++ +I+ K + + + + L +M + D
Sbjct: 267 -LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++I L K + A++LM M +G +VVTY SL+ LCK + LD+A F +
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +RGI PT+ TY A +D + G + L + + GC TY ++I +
Sbjct: 386 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 445
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
F + +++ +NG P+ ++ +I +LF + ++A + EM K LL
Sbjct: 446 FDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 176/398 (44%), Gaps = 47/398 (11%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E++ ++ L K++++ TA +L +M + VT L ILI +C + + + +
Sbjct: 12 EFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVT---LNILINCFCHLGQMAFSFSVL 68
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ + H F +K V F + S+ +LNG C
Sbjct: 69 GKILKLGYQPDTITLNTLMKGLCLKGEVKKSLH--FHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 184 NIIGSSR-----------------------------------EAERVWMEMSQRGICYDV 208
I G +R EA ++ EM RGI D
Sbjct: 127 KI-GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
++++ +I + L L D+M I +YN +I+AL K VK+A +L+
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAV 245
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RT 325
M ++G+ P VVTY++L+ C ++ A+Q F M+Q G++P + +Y+ ++ + +
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E LL M P TY LI + + + + NE+ G D +YT+
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L+ AL N L++A +M+MKE+ + P T L D
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T++ L K+ + A L+ + T P++V T+ I C V
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTI---IDGLCKDKLV 166
Query: 120 GRAINAFYAY-KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A + + R F I + L+ C + A L+ K++ P +N
Sbjct: 167 NEAYDLYSEMDARGIFPDAIT-YTTLIYGFCLLGQLMGAFSLLDEMILKNINP-GVYIYN 224
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++N C G+ +EA+ + M++ GI VV++S ++ Y + ++F M +
Sbjct: 225 ILINALCKE-GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
MG+ + YN +I+ L K + V +A++L++ M K + P+ VTYNSLI LCK+ ++
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A +EM RG + TY + LD + + ++ L M++ G QPT TY LI
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + N +++ + G D +YT +I L G +EA +M++ +P
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463
Query: 414 EPKTDELL 421
T E++
Sbjct: 464 NAVTFEII 471
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++ F+ I+ +K + + L QM+ GI + N +I+ + + S++
Sbjct: 10 IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G P+ +T N+L+K LC ++ ++ D+++ +G +Y L+ + + G
Sbjct: 70 KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129
Query: 327 EE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL + +P Y +I + + + +++E+ G PD +YT
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
LI+ L G+L A EM K + P
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINP 218
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 165/361 (45%), Gaps = 19/361 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I LGK R+ A+ L +E R P++VT T+ I C GR NA
Sbjct: 33 YGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM---IDGLCKC---GRIENALT 86
Query: 128 AYK----RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
Y F F + + L+ LCR V L+ + P N ++N ++N
Sbjct: 87 LYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAP-NAVTYNTLVNA 145
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--GI 239
G S+EA + +M+ G ++++F II K + R+ D+M + G+
Sbjct: 146 LLGQ-GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGL 204
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D +N+V+ L K + + DA ++ K E+G PNVVTY++LI L K K+DEA Q
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 264
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+M++ G TY +D +++ G E+ +L MR GC P TY LI F
Sbjct: 265 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 324
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ + E+ E G P +YT L H L +G+ +EA + M + P
Sbjct: 325 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 384
Query: 417 T 417
T
Sbjct: 385 T 385
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 23/389 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A T + G+ + Y T+I L + + D L++EM G P+ VT T
Sbjct: 82 ENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNT 141
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHL- 160
L+ A+ GR+ AF ++ A G F ++ LC+ ++ A +
Sbjct: 142 LVN------ALLGQGRSKEAFSLLEQMA-ANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194
Query: 161 --MFCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIIS 216
MF + + +FN +L+G C R +A V+ +RG +VV++S +I
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCK---EQRILDAHNVFKRALERGCRPNVVTYSTLID 251
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
SK + + L+L +M +G + Y+ V+ L K ++DA+ +++ M + G P
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 311
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLL 333
+ VTYN+LI K ++L EA EML+ G P++ TY + R+G +E +L
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG-NGPDRSSYTALIHALFL 392
+ M GC P TY ++ + + + +++ + P +Y+ALI L
Sbjct: 372 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
GK++EA+++ M +P+ T +L
Sbjct: 432 AGKIDEAYEFLERMIRAGRIPDVVTFSIL 460
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 179/400 (44%), Gaps = 46/400 (11%)
Query: 60 GYAHSTREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G A + Y+T++ A+LG+ R + A++L+++M P L+T ++ + + +
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKE-AFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPF- 170
R ++ + + + + F +L LC+ + + DA H +F C +V +
Sbjct: 190 AFRVVDEMFMIES-GLSPDVITFNSVLDGLCKEQRILDA-HNVFKRALERGCRPNVVTYS 247
Query: 171 -----------------------------NTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
NT +++ +++G + G +A V +M
Sbjct: 248 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV-GRMEDAVVVLRQMRD 306
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D V+++ +I + K + L + + L +M G Y + H L + +
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ-RGISPTIRTYHAFL 320
A+ ++ M +G APN +TY+S++ LCKA ++ EA F++M + ++P + Y A +
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 426
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + + G +E + LE M + G P T+ +LI + +++ ++E G
Sbjct: 427 DGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV 486
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y L+ L +++EA + +M+ L P+ T
Sbjct: 487 PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 157/343 (45%), Gaps = 18/343 (5%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
+I C V +AI F + + L+ L + + V++A L
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKA 221
C+ V +NT +++G C G A ++ +M+ G VV++S +I +
Sbjct: 61 CHPTVVTYNT-----MIDGLCKC-GRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRD 114
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ K +L ++M G + YN +++AL K+A SL++ M G P ++T+
Sbjct: 115 HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITF 174
Query: 282 NSLIKPLCKARKLDEARQAFDEM--LQRGISPTIRTYHAFLDIIRTGEEVF---GLLESM 336
+IK LCK +++ A + DEM ++ G+SP + T+++ LD + + + + +
Sbjct: 175 GLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 234
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ GC+P TY LI S+ + ++ ++ E G + +Y+ ++ L G++
Sbjct: 235 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 294
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
E+A +M++ LP+ T L D + +Q + + L+
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T Y T++ L KV + + A ++ +MR P VT TL
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL------------- 319
Query: 120 GRAINAFYAYKRFKFAVG-------------IEDFQGLLSALCRYKNVQDAEHLM--FCN 164
I+ F+ +R + AVG + + L LCR +A ++
Sbjct: 320 ---IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD-VVSFSCIISCYSKARN 223
+ P N +++ I++G C G EA + +M++ + V+++S +I KA
Sbjct: 377 RGCAP-NAITYSSIVDGLCKA-GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + ++M R G D ++ +I+ L + + L + M E+G P++VTY +
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISP---TIRTY-HAFLDIIR 324
L+ LC+A ++DEA F +M G+SP T RT H L++ R
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 32/262 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G Y+T+I K ++ A L+ EM PS+VT TL
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL---------C 355
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQG-------------LLSALCRYKNVQDAEHLM-- 161
H + R+ RF AV I D+ ++ LC+ V +A
Sbjct: 356 HGLCRS-------GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+V + +++ +++G C G EA M + G DVV+FS +I+ A
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKA-GKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ L LF M G D Y ++ L + V +A L + M G++P+ T
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527
Query: 282 NSLIKPLCKARKLDEARQAFDE 303
++I L + + ++A++ DE
Sbjct: 528 RTMIHGLLEVNRDEDAKRIQDE 549
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 10/359 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+T + M+ K +FD A+I EM P +VT +++ R + A+
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT-HNVMVDARFRAGDAEAAMAL 152
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNG 181
K K GI + +L LCR + D +F D F + +SF I++ G
Sbjct: 153 VDSMVSKGLK--PGIVTYNSVLKGLCR-SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C + G EA +++ EM RGI D+VSFSC+I +++ + + +M+ G+
Sbjct: 210 FCRV-GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +Y VI + L+ DA+ + M G P+VVTYN+L+ LCK R+L +A
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM +RG+ P + T+ + I ++ L ++M +P TY LI R
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+W+++ P+ +Y+ LI + G++E+A + EM K +LP T
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 167/368 (45%), Gaps = 26/368 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A R + +I +V + + A + EMR P LV+ L+ L R
Sbjct: 195 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR------ 248
Query: 120 GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA----EHLMFCNKDVFPFN 171
G+ +A AY R G+ + ++ CR + DA + ++ C P +
Sbjct: 249 GKMDHAM-AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG--CLP-D 304
Query: 172 TKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++N +LNG C R +AE + EM +RG+ D+ +F+ +I Y L K L+
Sbjct: 305 VVTYNTLLNGLCK---ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD M + D YN +I + + + A L M + + PN VTY+ LI C
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTND 346
+ ++++A DEM+ +GI P I TY++ + R+G G L+ M P
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY LI + + + + FK+ N + + PD +Y LI+ ++G ++EA + +M
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541
Query: 407 KEKQLLPE 414
K + P+
Sbjct: 542 CAKGIEPD 549
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 43/307 (14%)
Query: 156 DAEHLMFC-NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
DA L+F N +V NT + NI+++ +C + + + V EM +R + DVV+ + +
Sbjct: 81 DAYRLVFSSNSEV---NTYTLNIMVHNYCKALEFDK-VDAVISEMEKRCVFPDVVTHNVM 136
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+ +A + + L D M G++ YN+V+ L + + A + K M++ GV
Sbjct: 137 VDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGV 196
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE------ 327
AP+V ++ LI C+ +++EA + + EM RGI P + ++ + + R G+
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256
Query: 328 -----EVFGLL--------------------------ESMRKMGCQPTNDTYIMLIKKFS 356
FGL+ + M GC P TY L+
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 316
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ R+ + + NE+ E G PD ++T LIH + GKL++A Q + M ++L P+
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 376
Query: 417 TDELLQD 423
T L D
Sbjct: 377 TYNTLID 383
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 10/278 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K R+ A L++EMR P L T TL I YC + +A+ F
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL---IHGYCIEGKLDKALQLFD 364
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ I + L+ +CR ++ A L ++++FP N +++I+++ C
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHCEK 423
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +A EM +GI ++++++ II Y ++ N+ K + +M + D
Sbjct: 424 -GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 482
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH K + DA L+ ME++ V P+VVTYN LI + EA F++M
Sbjct: 483 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 542
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMG 340
+GI P TY + ++ T +E F L + M + G
Sbjct: 543 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L G C G +A V+ EM G+ DV SF+ +I + + + + L+++ +
Sbjct: 167 TYNSVLKGLCRS-GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 225
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ D ++ +I A+ + A++ ++ M G+ P+ V Y +I C+A
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
+ +A + DEM+ G P + TY+ L+ + R + GLL MR+ G P T+
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + ++++ + PD +Y LI + G L++A+ + +M ++
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 411 LLPEPKTDELLQDWSYNKQFVE 432
+ P T +L D K VE
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVE 427
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ + A+ +DEM P+++T ++ I+ YC +V + K + +
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSI---IKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 140 DFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ + + DA L+ K+ + ++N+++NG+ ++ G+ +EA ++ +
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF-SVHGNVQEAGWIFEK 540
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
M +GI D ++ +I+ + A N + +L D+M + G E
Sbjct: 541 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 175/362 (48%), Gaps = 21/362 (5%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ ++ LG+ R+F L+ EM+ + P++V T ILI C V A+ F
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVV---TFGILINHLCKFRRVDEALEVFEK 365
Query: 129 Y-----KRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILN 180
F + + L+ LC+ ++ L M P NT ++N +++
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMP-NTVTYNCLID 424
Query: 181 GWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C ++I ++RE ++ +M++ G+ +VV+ + ++ K ++ + F++M+ G
Sbjct: 425 GYCKASMIEAARE---LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ + Y A+I A ++ A+ L M E G +P+ + Y +LI L +A KLD A
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+M + G SP I +++ ++ R +E + +L+ M G +P TY LI F
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
S+ F ++ ++ + G P +Y ALIHA LNG L+EA + + +M +P P
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP-P 660
Query: 416 KT 417
T
Sbjct: 661 NT 662
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 167/406 (41%), Gaps = 56/406 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETG-----PSLVTKQTLLILIRRYCAVHDVGRA 122
+ +I L K R+ D A + ++M GGE+ P ++T TL I C V GR
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTL---IDGLCKV---GRQ 396
Query: 123 INAFYAYKRFK----FAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+R + + L+ C+ ++ A L NKD P N + N
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C G A + EM +G+ + V+++ +I + N+ K + LFD+M
Sbjct: 457 LVDGMCKH-GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D VY +I L++ + A ++ M+E G +P++V++N LI C+ KLDEA
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ EM GI P TY+ + +TG+ L++ M K G PT TY LI
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 355 FSRWRQFGNVFKVWNEISEN------------------------------------GNGP 378
+ K++ ++S G P
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+ +++ A+ L L +A + M E P+ T E+L +W
Sbjct: 696 NTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEW 741
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 10/303 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EAA F K G + +T++ + K + + A +EM+G + VT
Sbjct: 433 EAARELFDQMNKD-GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L IR +C V+++ +A+ F + + L+S L + + A ++ K
Sbjct: 492 L---IRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 166 DV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ F + SFN+++NG+C EA + EM GI D V+++ +IS +SK +
Sbjct: 549 EAGFSPDIVSFNVLINGFCRK-NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNS 283
RL +M + G+ Y A+IHA + +A+ + + M V PN V YN
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMG 340
LI LC+ ++D A D+M +G+ P T++A ++ + F L++ M +
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA 727
Query: 341 CQP 343
C P
Sbjct: 728 CNP 730
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 28/386 (7%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKV-RKFDTAWALIDEMRGGETG--PSLVTKQ 104
A FF W S S T+ A+ R+ ++ L+D + ++ P V
Sbjct: 103 ALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAA 162
Query: 105 TLLI-LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--- 160
TLLI R V + N +R I L+ L R V DA HL
Sbjct: 163 TLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNI-----LIDVLFRKGRVDDALHLLDE 217
Query: 161 MFCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVW---MEMSQRGICYDVVSFSCII 215
M K FP N+ + +I+ + + +G + + E + + ++ + + + + +I
Sbjct: 218 MLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLI 277
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
S ++ + + + ++G + NA++ AL + R K +L+ M+E +
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG------ISPTIRTYHAFLD-IIRTG-- 326
PNVVT+ LI LCK R++DEA + F++M G + P + TY+ +D + + G
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 327 EEVFGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
EE GL+E MR C P TY LI + + +++++++++G P+ +
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQL 411
L+ + +G++ A +++ EM+ K L
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGL 482
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 207/416 (49%), Gaps = 23/416 (5%)
Query: 30 SSELVSEVLSW--VRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
++ ++ ++L W V+N + + A F AG G+ S + M+ L K + +
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAG-DYGFRLSALSCNPMLVSLVKEGRIGVVES 215
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
+ EM G ++VT ++I C V +A + K + F+ + + ++
Sbjct: 216 VYKEMIRRRIGVNVVTFD---VVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 147 ALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQ 201
C+ + A+ L+ K + P N +FNI+++G+C N+ A++V+ EM +
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHP-NEITFNILIDGFCRDENVTA----AKKVFEEMQR 327
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+G+ +VV+++ +I+ L + L L D+M MG++ + YNA+I+ K +++K+
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A ++ + ++G+APNV+T+N+LI KA ++D+A ML G+ P + TY+ +
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 321 DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS---ENG 375
R G +E L + M G + TY +L+ + + ++ +E++ + G
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKG 507
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
+ +Y LI GKLEEA++ EM EK L+P T ++L+D K F+
Sbjct: 508 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 21/291 (7%)
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F +E F LL L KN L+ D F N N + +++GS
Sbjct: 99 KEFGAIHNVEQFCRLLHLLANAKNYNKIRALL----DSFAKNAHYSNSTIFHSLSVLGSW 154
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A + ++M ++ Y K + L FD+ G N +
Sbjct: 155 GCANSIIVDM--------------LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPM 200
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ +L K + S+ K M + + NVVT++ +I LCK K +A ++M G
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGF 260
Query: 310 SPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SP++ TY+ +D ++F LL+ M P T+ +LI F R K
Sbjct: 261 SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKK 320
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
V+ E+ G P+ +Y +LI+ L NGKL+EA +M L P T
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 207/442 (46%), Gaps = 42/442 (9%)
Query: 33 LVSEVLSW--VRNDWEAAFTFFLW--AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ +LS+ + + E +FF W + S HS + T++ L RKF A +L+
Sbjct: 53 IIISILSYKPLHSQPETLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLL 112
Query: 89 DE---------------MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
+R T P + +L + +G I F KR +
Sbjct: 113 LNFISSDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYV--ISKQPHLGHQI--FNKMKRLR 168
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF---------PFNTKSFNIILNGWCN 184
F + LL+AL R ++ H + +++VF P N +FNI+++G+C+
Sbjct: 169 FRPNLLTCNTLLNALVR----SNSSHSLVFSREVFQDAVKLGVQP-NVNTFNILIHGYCS 223
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
++ EA R+ +M + G C D V+++ +++ K L +V L QMK G+ +R
Sbjct: 224 D-NNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRN 282
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++H K + +K+A +++ M KG+ P+V TYN++++ LC K+DEA + D+M
Sbjct: 283 TYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKM 342
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ P + TY+ +D R + F L+E M+ G + T+ ++IK F +
Sbjct: 343 ESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKI 402
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DEL 420
V ++ E+G PD +Y +I+ GK+ EA++ EM K L + T + L
Sbjct: 403 DEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTL 462
Query: 421 LQDWSYNKQFVERQIASLKAHQ 442
L KQ + ++KA +
Sbjct: 463 LHTMCLEKQLDDAYTLTMKARK 484
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 40/357 (11%)
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
T ILI YC+ ++ A+ + + +L+ALC+ + L+
Sbjct: 212 NTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQ 271
Query: 164 --NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ-------------RGIC--- 205
N +FP N ++NI+++G+C + AE + + + RG+C
Sbjct: 272 MKNSGLFP-NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 206 ------------------YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
DVV+++ +I + R +L ++MK G++ + +N
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHN 390
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + +A ++M M E G +P+ TYN++I CKA K+ EA + DEM ++
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ T + L + + ++ + L RK G TY LI + + Q
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+W E+ E G +Y +I L L+GK ++A E+ EK L+P+ T ++
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNII 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 167/389 (42%), Gaps = 29/389 (7%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
L W++ EAA L GK G Y+TM+ L K D A L D+M +
Sbjct: 294 LKWLK---EAAEVIELMTGK--GMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLV 348
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKN 153
P +VT TL+ C H A AF + K A G+++ ++ C
Sbjct: 349 PDVVTYNTLI----DGCFEHRGSDA--AFKLVEEMK-ARGVKENGVTHNIMIKWFCTEGK 401
Query: 154 VQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ +A ++M + F + ++N ++NG+C G EA ++ EM ++G+ D + +
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKA-GKMAEAYKMMDEMGRKGLKLDTFTLN 460
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ + L L + ++ G D Y +I K A+ L + M+E
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG------ 326
G+ ++TYN++I+ LC + K D+A +E+L++G+ P T +II G
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS----NIIIHGYCWEGA 576
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E+ F M + +P T +L++ R ++N G D +Y
Sbjct: 577 VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNI 636
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+I + +LE+A EM+ K L P+
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPD 665
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 182/461 (39%), Gaps = 80/461 (17%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L K SG + Y+ ++ K++ A +I+ M G P + T T+ +R
Sbjct: 268 LLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTM---VR 324
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPF 170
C + A+ + FK + + L+ ++ A L+ K
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKE 384
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + NI++ +C G EA V ++M + G D +++ +I+ Y KA + + ++
Sbjct: 385 NGVTHNIMIKWFCTE-GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM 443
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-MKS--------------------- 268
D+M R G++ D N ++H + + + DA +L MK+
Sbjct: 444 MDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFK 503
Query: 269 -------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
M+E G+ ++TYN++I+ LC + K D+A +E+L++G+ P T
Sbjct: 504 DEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDEST 563
Query: 316 YHAFL--------------------------DIIRTGEEVFGLL-ESMRKMGCQPTND-- 346
+ + DI + GL E M + G N
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623
Query: 347 ---------TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
TY ++I F + R+ + F + E+ PDR +Y A++ L G+ E
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
EA + ++ EK + KT + + + QI+SL
Sbjct: 684 EAEKLALKFAEKG--QQVKTQDTSPELGTSDMMYSEQISSL 722
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 134/328 (40%), Gaps = 37/328 (11%)
Query: 17 EMRNKIEECGIKVSSELVSEVLS--WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
+M +++ G+K+ + ++ +L + + A+T + A K+ GY Y T+I
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR-GYILDEVTYGTLIMG 500
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K + D A L +EM+ +++T T+ IR C +A++
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTI---IRGLCLSGKTDQAVDKLNELLEKGL 557
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIILNGWC--N 184
++ C V+ A F NK D+F + NI+L G C
Sbjct: 558 VPDESTSNIIIHGYCWEGAVEKA--FQFHNKMVEHSLKPDIF-----TCNILLRGLCREG 610
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
++ W+ +G D V+++ IIS + K R L L +M+ +E DR
Sbjct: 611 MLEKGLTLFNTWI---SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRY 667
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKG-------VAPNVVT----YNSLIKPLCKARK 293
YNA++ L K ++A L EKG +P + T Y+ I LC K
Sbjct: 668 TYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGK 727
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD 321
+A + F + Q+G+S TY +D
Sbjct: 728 YKDAMKLFQQAEQKGVSLNKYTYIKLMD 755
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 144/353 (40%), Gaps = 27/353 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG++ Y+TMI K K A+ ++DEM G G L T TL L+ C
Sbjct: 414 ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM--GRKGLKLDTF-TLNTLLHTMCLEK 470
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SFN 176
+ A ++ + + + L+ + + A L K+ T ++N
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ G C + G + +A E+ ++G+ D + + II Y + K + ++M
Sbjct: 531 TIIRGLC-LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVE 589
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D N ++ L + +++ ++L + KG + VTYN +I CK R+L++
Sbjct: 590 HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLED 649
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ--------PTNDT- 347
A EM + + P TY+A I TG G E K+ + T DT
Sbjct: 650 AFDLMTEMEGKNLEPDRYTYNA----IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTS 705
Query: 348 ---------YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
Y I ++ + K++ + + G ++ +Y L+ L
Sbjct: 706 PELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLL 758
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 179/372 (48%), Gaps = 13/372 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I L KV K + A +I++M+ +++T TL I YC + +G+ A
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTL---IDGYCKMGKIGKMYKADA 222
Query: 128 AYKRFKFAVGI----EDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGW 182
K + A GI F L+ C+ KNV A + N+ N ++N ++NG
Sbjct: 223 ILKEMR-ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
CN G EA + +M + ++++ + +++ + K + + + LFD M + GI +
Sbjct: 282 CNN-GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN +I A K ++DA +L + M KGV P+V TYN LI LC+ L+ AR
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM + + + TY+ +D + GE + LL+ M + G +P+ TY +I + +
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ +++ + G + ++Y LI KLE+A+ EM EK L+P T E
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520
Query: 420 LLQDWSYNKQFV 431
++ + K FV
Sbjct: 521 IVTEEMMEKGFV 532
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 164/341 (48%), Gaps = 16/341 (4%)
Query: 119 VGRAINAFYAYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFN 171
VG + + YK R + + F +++ LC+ + A ++ +D+ N
Sbjct: 141 VGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII---EDMKVRGVSAN 197
Query: 172 TKSFNIILNGWCNI--IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++N +++G+C + IG +A+ + EM GIC + V+F+ +I + K +N+ ++
Sbjct: 198 VITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMK 257
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +M R G++ + YN++I+ L V +A +L M + PN++T+N+L+ C
Sbjct: 258 VFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFC 317
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTND 346
K + + +A + FD+M ++GI+P + TY+ +D E+ F L M G P
Sbjct: 318 KNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVS 377
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY LI R + +E+ D +Y LI +L G++++A + EM
Sbjct: 378 TYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEM 437
Query: 407 KEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
K L P T + D Y K+ R +L++ + G+
Sbjct: 438 CRKGLKPSQLTYNTMID-GYCKEGNLRAALNLRSQMEKVGR 477
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 8/276 (2%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+ AA F +Q G + Y+++I L K + A AL D+M P+++T
Sbjct: 251 NVSAAMKVFAEMNRQ-GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--M 161
LL +C V +A F + + + L+ A C+ +N++DA L +
Sbjct: 310 NALL---NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRI 366
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K V P + ++N ++ G C G A + EM + + D+++++ +I
Sbjct: 367 MLGKGVCP-DVSTYNCLIAGLCRK-GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ K LRL D+M R G++ + YN +I K ++ A++L ME+ G NV TY
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATY 484
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
N LIK CK KL++A +EML++G+ P TY
Sbjct: 485 NVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 48/312 (15%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ S N +++G + G + E V+ EM +R I ++SF+ +I+ K L+K
Sbjct: 124 LKLSVTSCNPLMSGLVKV-GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAK----GRL------------------------- 258
+ + MK G+ + YN +I K G++
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 259 ---------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
V A+ + M +GV PNVVTYNSLI LC K++EA D+M+ +
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 310 SPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P I T++A L+ +++ E+F + M K G P TY +LI + + +
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELF---DDMPKQGITPNVTTYNILIDAYCKDENMED 359
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
F ++ + G PD S+Y LI L G LE A EM K L + T +L D
Sbjct: 360 AFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILID 419
Query: 424 WSYNKQFVERQI 435
NK +++ +
Sbjct: 420 SLCNKGEMKKAL 431
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
S++E ++ + +S C + + ++ Y+K F + G++ N
Sbjct: 73 STQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCN 132
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++ L K + D + K M + + P ++++N +I LCK KL++A ++M R
Sbjct: 133 PLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVR 192
Query: 308 GISPTIRTYHAFLD----IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
G+S + TY+ +D + + G+ + +L+ MR G P T+ +LI F + +
Sbjct: 193 GVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNV 252
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DEL 420
KV+ E++ G P+ +Y +LI+ L NGK+ EA +M L P T + L
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNAL 312
Query: 421 LQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
L + NK +Q L P+ G V +
Sbjct: 313 LNGFCKNKMV--KQAGELFDDMPKQGITPNVTT 343
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 10/359 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+T + M+ K +FD A+I EM P +VT +++ R + A+
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT-HNVMVDARFRAGDAEAAMAL 213
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNG 181
K K GI + +L LCR + D +F D F + +SF I++ G
Sbjct: 214 VDSMVSKGLK--PGIVTYNSVLKGLCR-SGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C + G EA +++ EM RGI D+VSFSC+I +++ + + +M+ G+
Sbjct: 271 FCRV-GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +Y VI + L+ DA+ + M G P+VVTYN+L+ LCK R+L +A
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM +RG+ P + T+ + I ++ L ++M +P TY LI R
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+W+++ P+ +Y+ LI + G++E+A + EM K +LP T
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 167/368 (45%), Gaps = 26/368 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A R + +I +V + + A + EMR P LV+ L+ L R
Sbjct: 256 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR------ 309
Query: 120 GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA----EHLMFCNKDVFPFN 171
G+ +A AY R G+ + ++ CR + DA + ++ C P +
Sbjct: 310 GKMDHAM-AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG--CLP-D 365
Query: 172 TKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++N +LNG C R +AE + EM +RG+ D+ +F+ +I Y L K L+
Sbjct: 366 VVTYNTLLNGLCK---ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD M + D YN +I + + + A L M + + PN VTY+ LI C
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTND 346
+ ++++A DEM+ +GI P I TY++ + R+G G L+ M P
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY LI + + + + FK+ N + + PD +Y LI+ ++G ++EA + +M
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602
Query: 407 KEKQLLPE 414
K + P+
Sbjct: 603 CAKGIEPD 610
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 43/307 (14%)
Query: 156 DAEHLMFC-NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
DA L+F N +V NT + NI+++ +C + + + V EM +R + DVV+ + +
Sbjct: 142 DAYRLVFSSNSEV---NTYTLNIMVHNYCKALEFDK-VDAVISEMEKRCVFPDVVTHNVM 197
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+ +A + + L D M G++ YN+V+ L + + A + K M++ GV
Sbjct: 198 VDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGV 257
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE------ 327
AP+V ++ LI C+ +++EA + + EM RGI P + ++ + + R G+
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317
Query: 328 -----EVFGLL--------------------------ESMRKMGCQPTNDTYIMLIKKFS 356
FGL+ + M GC P TY L+
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 377
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ R+ + + NE+ E G PD ++T LIH + GKL++A Q + M ++L P+
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 437
Query: 417 TDELLQD 423
T L D
Sbjct: 438 TYNTLID 444
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 10/283 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K R+ A L++EMR P L T TL I YC + +A+ F
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL---IHGYCIEGKLDKALQLFD 425
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ I + L+ +CR ++ A L ++++FP N +++I+++ C
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHCEK 484
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +A EM +GI ++++++ II Y ++ N+ K + +M + D
Sbjct: 485 -GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 543
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH K + DA L+ ME++ V P+VVTYN LI + EA F++M
Sbjct: 544 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 603
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTN 345
+GI P TY + ++ T +E F L + M + G P +
Sbjct: 604 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L G C G +A V+ EM G+ DV SF+ +I + + + + L+++ +
Sbjct: 228 TYNSVLKGLCRS-GMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 286
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ D ++ +I A+ + A++ ++ M G+ P+ V Y +I C+A
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
+ +A + DEM+ G P + TY+ L+ + R + GLL MR+ G P T+
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + ++++ + PD +Y LI + G L++A+ + +M ++
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 411 LLPEPKTDELLQDWSYNKQFVE 432
+ P T +L D K VE
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVE 488
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ + A+ +DEM P+++T ++ I+ YC +V + K + +
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSI---IKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542
Query: 140 DFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ + + DA L+ K+ + ++N+++NG+ ++ G+ +EA ++ +
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF-SVHGNVQEAGWIFEK 601
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
M +GI D ++ +I+ + A N + +L D+M + G D K
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 154/317 (48%), Gaps = 19/317 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
I+I+ C ++ ++ + + F F+ + + L+ C+ ++ A KD+
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA-------KDL 220
Query: 168 FPFNTKSFNIILNGWCNII--------GSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F F F ++ N W + G ++ ++ +M + G+ ++ +++C+++ +
Sbjct: 221 F-FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHC 279
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K +LFD+M+ G+ C+ YN +I L + +A +M M+ G+ PN++
Sbjct: 280 KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLI 339
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESM 336
TYN+LI C KL +A ++ RG+SP++ TY+ + + G +++ M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ G +P+ TY +LI F+R ++ + + E G PD +Y+ LIH + G++
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459
Query: 397 EEAHQYYMEMKEKQLLP 413
EA + + M K+L P
Sbjct: 460 NEASRLFKLMVAKKLEP 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 164/362 (45%), Gaps = 11/362 (3%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
+R Y MI + + D++ + +EM P LL + + + R
Sbjct: 94 SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR--- 150
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC 183
F+ + K + + F ++ C ++ + L+ ++ F N + +++G C
Sbjct: 151 -FFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +A+ ++ EM + G+ + +++ +I K + ++++M+ G+ +
Sbjct: 210 KR-GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNL 268
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN V++ K KDA L M E+GV+ N+VTYN+LI LC+ K +EA + D+
Sbjct: 269 YTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328
Query: 304 MLQRGISPTIRTYHAFLD----IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M GI+P + TY+ +D + + G+ L ++ G P+ TY +L+ F +
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGK-ALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
KV E+ E G P + +YT LI +E+A Q M+E L P+ T
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYS 447
Query: 420 LL 421
+L
Sbjct: 448 VL 449
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 43/342 (12%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAIL 75
EM K++E G+ + + V++ D F L+ ++ G + + Y+T+I L
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGL 313
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ K + A ++D+M+ P+L+T TL I +C V +G+A++ K
Sbjct: 314 CREMKANEANKVMDQMKSDGINPNLITYNTL---IDGFCGVGKLGKALSLCRDLKS---- 366
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+GL +L Y NI+++G+C G + A +V
Sbjct: 367 ------RGLSPSLVTY------------------------NILVSGFCKK-GDTSGAGKV 395
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM +RGI ++++ +I +++ N+ K ++L M+ +G+ D Y+ +IH
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A L K M K + PN V YN+++ CK A + F EM ++ + P + +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 316 YHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
Y ++++ R +E GL+E M G P+ D+ + LI +
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS-DSILNLISR 556
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +G F+ +++ + + ++ R F++ K + ++ D + VI +
Sbjct: 119 EMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK-IKVDLDVYSFGIVIKGCCEAG 177
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++ + L+ + E G +PNVV Y +LI CK ++++A+ F EM + G+ TY
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + G ++ F + E M++ G P TY ++ + + + + FK+++E+ E
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G + +Y LI L K EA++ +MK + P T L D
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLID 346
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E ++Y +I+A + + + +IS M +KG P +N+L+ + + ++ +
Sbjct: 91 ETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR 150
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTG------EEVFGLLESMRKMGCQPTNDTYIMLIK 353
F+E I + Y +F +I+ E+ F LL +R+ G P Y LI
Sbjct: 151 FFNE---SKIKVDLDVY-SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLID 206
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ++ E+ + G + +YT LIH LF NG ++ + Y +M+E + P
Sbjct: 207 GCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFP 266
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 174/370 (47%), Gaps = 27/370 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV--HDVG-RAIN 124
Y+T+I+ L + K D A+ + M P ++ TL I +C VG + +N
Sbjct: 10 YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTL---IHGFCKAGQPQVGHKLLN 66
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
A KRF+ V + + ++ C+ ++ K + S+ ++ G +
Sbjct: 67 Q--ALKRFRPDVFL--YTSVIHGYCKAGDLDTGYFRAVTPKA--SLDVISYTTVIKGLAD 120
Query: 185 IIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
S R EA ++ E+ G +VV+++ +I KA + L+ F++M
Sbjct: 121 ---SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
R Y VI L K +++ DA + + M +KG P+ +TY +LI KA K+DEAR+ D
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 303 EMLQRGISPTIRTY----HAF--LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
ML +G PT TY H F LD+I +EV + MR+ GC+P + L+ +
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV---IAQMRERGCEPGLFIFTSLLSYYL 294
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++V E++ G PD YT+LI LF G++ EA + M EK P+
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354
Query: 417 T-DELLQDWS 425
T ++Q++S
Sbjct: 355 TYGTIIQNFS 364
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 82/387 (21%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L ++ D A L +E++ P++V Y AV D
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVA----------YTAVID--------G 152
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
K + G+++F+ + + C P T ++ ++++G C
Sbjct: 153 LLKAGRIEDGLKNFEEMSGSSC------------------VPTRT-TYTVVIDGLCKA-Q 192
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+A +V+ +M Q+G D ++++ +I +SKA + + +L D M G E Y
Sbjct: 193 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 252
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+++H K ++ +A ++ M E+G P + + SL+ + +EA Q EM R
Sbjct: 253 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 312
Query: 308 GISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G +P + Y + +D++ TG E + +SM + GC P TY +I+ FS+ GNV
Sbjct: 313 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK---IGNV 369
Query: 365 --------------------------------------FKVWNEISENGNGPDRSSYTAL 386
F V++ + +G P+ ++ L
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
+H LF +GK + A + EM EK+ +P
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVP 456
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 160/375 (42%), Gaps = 19/375 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G T Y T+I K K D A L+D M P+ VT ++ + +C +
Sbjct: 206 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI---VHGFCKLD 262
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFN 171
+ A + G+ F LLS ++A ++ C DV +
Sbjct: 263 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY- 321
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T +++ + G EA V+ M ++G D +++ II +SK N+ +
Sbjct: 322 TSLIDLLFS-----TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 376
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ M + G+ D YN+++ K V A + M G+ PN VT+N L+ L K
Sbjct: 377 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 436
Query: 292 RKLDEARQAFDEMLQRG-ISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDT 347
K D A F EML++ + PT+ +Y +D + + G E F + M G P T
Sbjct: 437 GKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHT 496
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI ++ + K+ ++ + G PD +Y+ALI L + ++ A + EM
Sbjct: 497 YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556
Query: 408 EKQLLPEPKTDELLQ 422
++ P T ++L+
Sbjct: 557 KRGCAPNEVTYKVLR 571
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 158/366 (43%), Gaps = 9/366 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + + Y +I L K + + +EM G P T+ T ++I C
Sbjct: 135 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP---TRTTYTVVIDGLCKA 191
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SF 175
+ A F + + L+ + + +A L+ P T ++
Sbjct: 192 QMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 251
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++G+C + EA+ V +M +RG + F+ ++S Y + ++ +M
Sbjct: 252 GSIVHGFCKL-DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D +Y ++I L V +A + SM EKG AP+ +TY ++I+ K ++
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A + + M + G+ P Y++ +D + ++ FG+ + M G +P T+ +L+
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430
Query: 353 KKFSRWRQFGNVFKVWNEISENGN-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + F ++ E+ E P SYT LI L G++ EA + EM ++ +
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490
Query: 412 LPEPKT 417
+PE T
Sbjct: 491 IPECHT 496
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG-------RLVK 260
+VS++ +IS + + + + F+ M G E D + +IH K +L+
Sbjct: 7 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 261 DAI-----------SLMKSMEEKG---------VAP----NVVTYNSLIKPLCKARKLDE 296
A+ S++ + G V P +V++Y ++IK L ++++DE
Sbjct: 67 QALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDE 126
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + F+E+ G SP + Y A +D +++ G GL E M C PT TY ++I
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVID 186
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + KV+ ++ + G PD +YT LI K++EA + M K P
Sbjct: 187 GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG--P 244
Query: 414 EP 415
EP
Sbjct: 245 EP 246
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 15/317 (4%)
Query: 5 VDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS 64
+D++ E ++MR + E G+ + + L+S LS R E A+ L G A
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR--AEEAYQV-LTEMTARGCAPD 317
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
Y ++I +L + A + D M P +T T++ + V G +
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377
Query: 125 AFYAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
K VG + F L+ + + V A + + P N +FN++++
Sbjct: 378 LMA-----KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP-NAVTFNVLMH 431
Query: 181 GWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G G + A ++ EM ++ + +VS++ +I KA + + F +M GI
Sbjct: 432 GLFKD-GKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y ++I++LAK + +A L++ M + GV P+V Y++LI L + +D A
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550
Query: 300 AFDEMLQRGISPTIRTY 316
F EM++RG +P TY
Sbjct: 551 VFQEMMKRGCAPNEVTY 567
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A Y T+I K+ + A +++ M GP +L+ Y +
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM---DGYVKLE 402
Query: 118 DVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
R AF Y R A GI+ F L+ L + A L K+ P
Sbjct: 403 ---RVDQAFGVYDRM-VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+ I+++G G EA + EM RGI + +++ +I +KA + + +L
Sbjct: 459 LVSYTILIDGLGKA-GRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 517
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL---IKPL 288
+ M ++G+ D + Y+A+I L +V A + + M ++G APN VTY L +
Sbjct: 518 EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAA 577
Query: 289 CKARKLDEARQAFDE 303
+A L+ +Q F +
Sbjct: 578 GRALDLEAVKQHFSQ 592
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
MG E YN VI LA + +A SM + G P+V+ + +LI CKA +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 297 ARQAFDEMLQRGISPTIRTY-----------------------HAFLDIIRTGEEVFG-- 331
+ ++ L+R P + Y A LD+I + G
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119
Query: 332 ----------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
L E ++ GC P Y +I + + + K + E+S + P R+
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+YT +I L L +A + + +M +K +P+ T L D
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 221
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 14/353 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI +L K F A L+DEMR ++ Q +L LIRRY A + F
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVP---ISAQLILALIRRYVRAEMPSEASDLFR 203
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ ++ G D LL AL + + +A+ + K VF + + +++ WC
Sbjct: 204 RME--EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCR 261
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EAERV+ EM Q G+ +V +++ +I +A + + L QM G +
Sbjct: 262 S-GRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTA 320
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA--RKLDEARQAFD 302
+NA++ A K + + + M + G P+++TYN L++ C LD A +
Sbjct: 321 TFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLT 380
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+ +G P T++ L ++ V L E M+++ C+P TY +L++ F+ +
Sbjct: 381 RMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEK 440
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
V ++ ++ G P+ ++Y ALI A G + AH EM E++ L
Sbjct: 441 SMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKAL 493
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D FN ++L ++G+ A +++ M + +VV+++ ++ ++ +
Sbjct: 387 CIPDCHTFNPM-LKLVL-----VLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEK 440
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTY 281
++ VLR+ M G+E + Y A+I A +G + ++L + +EEK + P Y
Sbjct: 441 SMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVY 500
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG 308
+ ++ L KA +L + + M+ RG
Sbjct: 501 DMVLALLRKAGQLRRHEELVEMMVDRG 527
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 5/157 (3%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMR 337
Y ++I L K AR DEM +R + + + A + E E L M
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 206
Query: 338 KMGC-QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ G P T L+ S+ R +++ ++ PD YT L+HA +G+L
Sbjct: 207 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSY-KSVFTPDVVLYTTLVHAWCRSGRL 265
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
EA + + EM++ + P T + D Y V R
Sbjct: 266 NEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPR 302
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 11/382 (2%)
Query: 67 EYHTMIAILGKVRKF-DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+++ +++ + K+R + D +L +M P TL +LI + + V +
Sbjct: 123 QFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPD---TYTLHMLINCFFQLQRVDLGFSV 179
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ + I F L++ LC+ A L + P + ++ I+NG C
Sbjct: 180 LAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQP-DVHTYTTIINGLC 238
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G + A ++ +M + G DVV++S II K R +++ L +F MK GI +
Sbjct: 239 KI-GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++I L ++A +++ M + PN+VT++ LI CK + EAR
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M + G+ P + TY + ++ EV L + M GC+P +Y +LI + + ++
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
G +++NE+ G PD SY LI L G+L EAH + M LP+ T +
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 421 LQDWSYNKQFVERQIASLKAHQ 442
L D + ++ + +A Q
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQ 499
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 178/375 (47%), Gaps = 22/375 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAVH 117
GY Y T+I L K+ + A L +M GE G P +VT T+ I C
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKM--GEAGCQPDVVTYSTI---IDSLCKDR 276
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A++ F K + I + L+ LC + ++A ++ + ++ P N +F
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP-NIVTF 335
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++++N +C G+ EA V M++ G+ +VV++S +++ YS + + +LFD M
Sbjct: 336 SLLINIFCKE-GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G + D YN +I+ K + + +A L M +G+ P++V+YN+LI LC+ +L
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA F ML G P + TY LD + G + F L +M+ +P Y +LI
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ R K+++E+ G P+ YT +I+ L G L+EA + + M+E
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 574
Query: 413 PEPKTDELLQDWSYN 427
P ++SYN
Sbjct: 575 P--------NEFSYN 581
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 170/359 (47%), Gaps = 10/359 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + ++T+I L KV KF A L D+M P + T T+ I C + +
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTI---INGLCKIGET 243
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + + ++ +LC+ + V +A + K + P N ++N
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP-NIFTYNS 302
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G CN REA + EM I ++V+FS +I+ + K N+ + + M M
Sbjct: 303 LIQGLCNF-SRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM 361
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + Y+++++ + V +A L M KG P+V +YN LI CKA+++ EA
Sbjct: 362 GVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+Q F+EM+ +G++P I +Y+ +D + + G E L ++M G P TY +L+
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F + F+++ + P+ Y LI A+ + L+EA + + E+ + L P
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 540
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 153/330 (46%), Gaps = 22/330 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + + Y+++I L ++ A A+++EM P++VT +LI +C
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT---FSLLINIFCKE 345
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+V A + + L++ V +A L C DVF
Sbjct: 346 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVF-- 403
Query: 171 NTKSFNIILNGWCNI--IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
S+NI++NG+C IG EA++++ EM +G+ D+VS++ +I + L +
Sbjct: 404 ---SYNILINGYCKAKRIG---EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
LF M G D Y+ ++ K + A L ++M+ + PN+V YN LI +
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
CK+R L EAR+ F E+ +G+ P ++ Y ++ + + G +E +M + GC P
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+Y ++I+ F + + ++ E+ E G
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCN 164
ILI YC +G A F I + L+ LC+ +++A L M N
Sbjct: 407 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 466
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
++ T ++I+L+G+C G +A R++ M + ++V ++ +I K+RNL
Sbjct: 467 GNLPDLCT--YSILLDGFCKQ-GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +LF ++ G++ + ++Y +I+ L K L+ +A+ ++MEE G PN +YN +
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVI 583
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
I+ + + A Q EM ++G + T
Sbjct: 584 IRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 31/379 (8%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST +++ ++ + K++ T +L +M P++ TL ILI +C ++ VG A
Sbjct: 60 STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI---YTLHILINSFCHLNRVGFAF 116
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + F L+ +C + +A HL +K + F + ++ ++N
Sbjct: 117 SVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF--DKMIGEGFRPDVVTYGTLIN 174
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G++ A R+ M Q+ +V +++ II K R + + LF +M GI
Sbjct: 175 GLCKV-GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN++IHAL K +L+ M + + P+VV++N+++ LCK K+ EA
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
D+M+QRG+ P + TY A +D ++ +E + ++M GC P +Y LI + +
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Query: 358 -------------------WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+ KV++ + G P+ SY LI+ ++++
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413
Query: 399 AHQYYMEMKEKQLLPEPKT 417
A + EM ++L+P+ T
Sbjct: 414 AMYLFGEMCRQELIPDTVT 432
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 169/403 (41%), Gaps = 60/403 (14%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T + T+I + K A L D+M G P +VT T LI C V +
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGT---LINGLCKVGNT 182
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
AI LL ++ + KN C +VF +NT I+
Sbjct: 183 SAAIR-------------------LLGSMVQ-KN---------CQPNVFAYNT-----II 208
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+ C EA ++ EM +GI D+ +++ +I V L ++M I
Sbjct: 209 DSLCK-DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D +N V+ AL K V +A ++ M ++GV PNVVTY +L+ C ++DEA +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 300 AFDEMLQRGISPTIRTYHAFLD----IIRTG------------------EEVFGLLESMR 337
FD M+ +G P + +Y+ ++ I R +E + ++M
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC P +Y LI + + ++ ++ E+ PD +Y+ LIH L +L+
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 447
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+A + EM +P T +L D+ +++ +A LKA
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 490
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 160/366 (43%), Gaps = 29/366 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ A+ L EM P + T +L+ + C V +N
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K V F ++ ALC+ V +A ++ + V P N ++ +++G C +
Sbjct: 264 DSKIMPDVVS---FNTVVDALCKEGKVTEAHDVVDKMIQRGVEP-NVVTYTALMDGHC-L 318
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR-------------------NLHK 226
+ EA +V+ M +G +V+S++ +I+ Y K + N+ +
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+++FD M G + YN +I+ K + + A+ L M + + P+ VTY++LI
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 438
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LC +L +A F EM+ P + TY LD + R E LL+++ P
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 498
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ I R + +++ +S G PD +Y+ +I+ L G L+EA + +
Sbjct: 499 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 558
Query: 404 MEMKEK 409
EM E
Sbjct: 559 REMDEN 564
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV------------ 278
F++M RM +N ++ ++AK + +SL M+ G+ PN+
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 279 -----------------------VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
T+ +LI+ +C K+ EA FD+M+ G P + T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y ++ + + G LL SM + CQP Y +I + RQ F +++E+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G PD +Y +LIHAL + + EM + +++P+
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 24/273 (8%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
D A + D M P++++ TL I YC + + +A+ F R +
Sbjct: 375 NMDEAVKVFDTMVCKGCMPNVISYNTL---INGYCKIQRIDKAMYLFGEMCRQELIPDTV 431
Query: 140 DFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR---EA 192
+ L+ LC + +QDA ++ C++ P N ++ I+L+ C +R EA
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQ--IP-NLVTYRILLDYLC----KNRYLAEA 484
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + + D+ + I +A L LF + G++ D Y+ +I+
Sbjct: 485 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 544
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L + L+ +A L + M+E G N YN++ + + + A Q EM+ RG S
Sbjct: 545 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 604
Query: 313 IRTYHAFLDIIRTGEEVFGLLESMRKM---GCQ 342
T F+ ++ GL +S++++ GC+
Sbjct: 605 ASTMTLFVKMLSDD----GLDQSLKQILRNGCK 633
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH- 317
+ AIS M P+ V +N L+ + K + +M GI P I T H
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 318 ---AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+F + R G F +L + K+G QP T+ LI+ + G +++++
Sbjct: 102 LINSFCHLNRVG-FAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +Y LI+ L G A + M +K P
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 199
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 46/246 (18%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y T+I L V + A AL EM P+LVT
Sbjct: 430 TVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT---------------------- 467
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGW 182
++ LL LC+ + + +A L+ ++ P + + NI ++G
Sbjct: 468 ----------------YRILLDYLCKNRYLAEAMALLKAIEGSNLDP-DIQVNNIAIDGM 510
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G A ++ +S +G+ DV ++S +I+ + L + +LF +M G +
Sbjct: 511 CR-AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 569
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+YN + + AI L++ M +G + + T +K L D Q+
Sbjct: 570 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD----DGLDQSLK 625
Query: 303 EMLQRG 308
++L+ G
Sbjct: 626 QILRNG 631
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 10/370 (2%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
FF WAG Q Y H T Y+ ++ +L K + D + ++M G P+ T LL
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLL-- 59
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDV 167
R C A + F + + + L++ LCR + V +A L+ +
Sbjct: 60 -RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++ +L+G C +G +EA ++ M RG D V ++ +I +SK ++ +
Sbjct: 119 QP-NVVTYGSLLSGLCK-MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RLF++M G YN+++ ++ SL K M +G PN+ T+N+L+
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPT 344
CK + EA + F EM G P + +Y+ + + G+ E LL M + G P
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y +LI +S+ + K++ EI ++G PD SY+ +I L GK+ A +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 405 EMKEKQLLPE 414
+M P+
Sbjct: 357 DMIANGSAPD 366
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 162/376 (43%), Gaps = 48/376 (12%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
+E A + F Q G + + Y +IA L + +K D A L++EM G P++VT
Sbjct: 68 FEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 105 TLL--------------------------------ILIRRYCAVHDVGRAINAFYAYKRF 132
+LL +LI + D+G A F
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186
Query: 133 KFAVGIEDFQGLLSALCR---YKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNII 186
+ + LLS R + VQ M C ++F FN +L+G+C +
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN-----LLDGFCKM- 240
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA R+++EM G DVVS++ ++ H+ RL +M R G+ D Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I +K + AI L + + G+ P+ +Y+++I LC+A K+ A F +M+
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G +P + + GE E L ++M K C P Y +L+ K + ++ +
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420
Query: 364 VFKVWNEISENGNGPD 379
V ++++E++E G PD
Sbjct: 421 VCEIFHELTERGFSPD 436
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 5/292 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT ++ +L C EA V+ M+ +G +V S+S +I+ + + + + L
Sbjct: 51 NTYTYGYLLRSLCQA-QRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G + + Y +++ L K +K+A+ L M +G P+ V YN LI K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ EA + F+EML++G PT+ TY++ L R GE V L + M + GC P T
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ L+ F + +++ E+ G PD SY L+ + GK EA + EM
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQD 459
+ P+ + +L D Y+K L P+SG S + D
Sbjct: 290 RSGVGPDIVSYNILID-GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K A+ L +EM P++ T +LL R + GR + F
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK---GEFGRVQSLFK 216
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
R I F LL C+ ++ +A L + + P + S+N ++ G C+
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK- 275
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+R+ EM + G+ D+VS++ +I YSK+ L ++LF ++ + G+E D Y
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT-------------------------- 280
+ +I L + V A + K M G AP+
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Query: 281 ---------YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
YN L+ LCKA++ D+ + F E+ +RG SP + L+ +R ++
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ +S++ ++ +K+ V ++ M G + Y ++ +L + + ++A S+
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+ M +G +PNV +Y+ LI LC+ +K+DEA + +EM+ G P + TY + L + +
Sbjct: 75 FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G +E L M GC P Y +LI FS+ G ++++ E+ E G P +
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
Y +L+ G+ + +M + +P T + LL + VE
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 182/400 (45%), Gaps = 13/400 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y T+I L K + A L+ EM P+LV L I C V
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSAL---IDGLCKDGFV 211
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ + + L+ C Q+ L+ ++V P + +FNI
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP-DDYTFNI 270
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G EA+ V MS+RG D+V+++ ++ Y N+H+ LF++M +
Sbjct: 271 LIDALCKE-GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E D YN +I K ++V +A+ L K + K + P + +YNSLI LC + ++
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ DEM P + TY+ +D + + G E G+L M K G +P TY ++
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 355 FSRWRQFGNVFK-VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R NV K ++N + ++G PD +Y LI+ ++EA + EM+ K L+P
Sbjct: 450 YC-LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ + L D N + + L SGQ+ VI+
Sbjct: 509 DIASYNSLIDGLCNLGRIP-HVQELLDEMCDSGQSPDVIT 547
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKD 166
+LI YC V A+ F I + L+ LC + + L+ +
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
P + ++NI+++ C G EA V + M ++G+ ++V+++ ++ Y N++
Sbjct: 400 AQPPDVVTYNILIDALCKE-GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F++M + G+E D YN +I+ K +V +AI L K M K + P++ +YNSLI
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTY------------------------------ 316
LC ++ ++ DEM G SP + TY
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578
Query: 317 ----HAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
HA +D + GE++ ++++ + GC P TY +LI + FG + +
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
++ +N PD ++ +I L + ++A + EM + L+
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +FN I+NG+C I G +A + +G +D ++ +I+ SK + L L
Sbjct: 124 NLVTFNTIINGFC-INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M++ ++ + +Y+A+I L K V DA+ L + E+G+ + VTYNSLI C
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ E Q +M++ + P T++ +D + + G E G+L M K G +P T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L++ + +++N + + G PD +Y LI ++EA + E+
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 408 EKQLLP 413
K L+P
Sbjct: 363 NKNLVP 368
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 38/329 (11%)
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
CR++NV DA VFP S L G +G A ++ ++ +GI +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 209 VSFSCIISCYSKARN-----------------------------------LHKVLRLFDQ 233
+F+ +I+CY + + K L
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G D+ Y +I+ L+K +K A+ L++ ME+ V PN+V Y++LI LCK
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ +A ++ +RGI TY++ +D G +EV LL M + P + T+ +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + V +S+ G PD +Y AL+ + EA + + M ++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLK 439
L P+ +L D + V+ + K
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K + A ++ M P++VT ++ YC ++V A + F
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM---DGYCLRNNVNVAKDIFN 464
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ I ++ L++ C+ + V +A L +K++ P + S+N +++G CN+
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP-DIASYNSLIDGLCNL 523
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + + EM G DV++++ ++ + K + K + LF Q+ GI D
Sbjct: 524 -GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+A++ L KG +K A +K + G +PNV TY LI LCK EA +M
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Query: 306 QRGISPTIRTYHAFLDII 323
P T+ + ++
Sbjct: 642 DNDRPPDAITFEIIIGVL 659
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H + R V DA++ M P ++ L+ + + A F ++ +GIS
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 311 PTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P+I T+ ++ F LL ++ K G QP T+ +I F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G D+ +Y LI+ L NG+++ A EM++ + P
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 176/373 (47%), Gaps = 13/373 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+A F F G+ G + ++ ++ +L K F+ AW + +E +G + +
Sbjct: 113 QALFYFNQMIGR--GLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVK----LDVYS 166
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--C 163
I+I+ C V + + + + + + L+ C+ +++ + L +
Sbjct: 167 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 226
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
DV N ++ +++NG+ + G ++ ++ +M GI +V +++ +I
Sbjct: 227 ELDVVA-NQYTYTVLINGFFKM-GLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGK 284
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L+ LFD+M+ G+ C+ YN +I L + R V +A LM M+ G++PN+++YN+
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---G 340
LI C LD+A F++M G SP++ TY+ + + G+ + +R+M G
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+ TY +L+ R F++++ + + G D Y LIH L + G ++EA
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464
Query: 401 QYYMEMKEKQLLP 413
+ + + E L P
Sbjct: 465 KLFKSLDEMHLKP 477
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 10/302 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + Y++MI K + A+ L DEMR ++VT TL I C
Sbjct: 261 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL---IGGLCQE 317
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV--FPFNTKS 174
V A KR + + + L+ C N+ A L K P + +
Sbjct: 318 RRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP-SLAT 376
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI++ G+ S+ + V EM RG+ V+++ ++ ++ N+ K +++ M
Sbjct: 377 YNILIAGFSEAKNSAGVTDMVR-EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ G+ D +Y +IH L +K+A L KS++E + PN V YN++I CK
Sbjct: 436 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 495
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
A + EM + G+ P + +Y++ + I+ E E LL+ M ++G +P+ + M+
Sbjct: 496 YRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Query: 352 IK 353
K
Sbjct: 556 SK 557
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 33/285 (11%)
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
G F LL L + + A + K + SF I++ G C + G + V
Sbjct: 129 GSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEV-GYLDKGFEVL 187
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M + G+ +VV ++ +I K ++ + +LF +M + + ++ Y +I+ K
Sbjct: 188 GQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKM 247
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
L KD I L + M+ G+ PNV TYNS+I C KL+ A + FDE
Sbjct: 248 GLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDE------------- 294
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
MR+ G TY LI + R+ ++ + +G
Sbjct: 295 -------------------MRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 335
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P+ SY LI G L++A + +MK P T +L
Sbjct: 336 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNIL 380
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL-------------------- 284
++ A+I+A + +L + A+ M +G+ P T+N+L
Sbjct: 97 IHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET 156
Query: 285 --------------IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIR 324
IK C+ LD+ + +M + G+SP + Y +D I
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
G+++F M ++ TY +LI F + + +++ ++ G P+ +Y
Sbjct: 217 RGKQLF---YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEK 409
++I +GKL A + + EM+E+
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRER 298
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ +V+ +L + + A ++A +S + + Y+ M+ + + +F L+D
Sbjct: 214 NARMVATILGVLGKANQEALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLD 273
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R + A+ +R I + L+SA
Sbjct: 274 LMRERGCVPDLVSFNTL-INARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACS 332
Query: 150 RYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + C D++ +N I + G C +R+AE ++ E+ +G
Sbjct: 333 RESNLEEAVAVFSDMESHRCQPDLWTYNAM---ISVYGRC---ARARKAEELFKELESKG 386
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+++ ++ +S+ N KV + ++M + G D YN +IH K A+
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
+ + M+ G P+ VTY LI L KA K++EA EML G+ PT+ TY A +
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAY 506
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G EE MR+ G +P Y +++ F R+ + +++E+ G PD
Sbjct: 507 AKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDN 566
Query: 381 SSYTALIHAL 390
Y ++HAL
Sbjct: 567 GLYEVMMHAL 576
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 169/400 (42%), Gaps = 47/400 (11%)
Query: 22 IEECGIKVSSELVSEVLSWV-RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRK 80
+EE ++++ V+ WV + +W+ A + + YA + R T++ +LGK +
Sbjct: 171 LEERRVQMTPTDFCFVVKWVGQQNWQRALELYECLNLRHWYAPNARMVATILGVLGKANQ 230
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
A + I R +V D + NA
Sbjct: 231 EALA---------------------VEIFARAESSVGDTVQVYNAM-------------- 255
Query: 141 FQGLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
G+ + R+ V++ LM C D+ FNT + +G A ++
Sbjct: 256 -MGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAME----PNLALQLLN 310
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
E+ + GI D+++++ +IS S+ NL + + +F M+ + D YNA+I +
Sbjct: 311 EVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCA 370
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ A L K +E KG P+ VTYNSL+ + ++ R +EM++RG TY+
Sbjct: 371 RARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYN 430
Query: 318 AFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + G ++ + M+ G P TY +LI + + V +E+ +
Sbjct: 431 TIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDA 490
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P +Y+ALI A GK EEA + + M+ + P+
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPD 530
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD--AISL 265
V ++ ++ Y++ KV L D M+ G D +N +I+A K ++ A+ L
Sbjct: 249 VQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQL 308
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI--- 322
+ + G+ P+++TYN+LI + L+EA F +M P + TY+A + +
Sbjct: 309 LNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGR 368
Query: 323 ---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
R EE+F LES G P TY L+ FSR V + E+ + G G D
Sbjct: 369 CARARKAEELFKELESK---GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y +IH G+ ++A Q Y +MK P+ T +L D
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLID 469
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V E+ G+ S + +++A NL +V ++++ MK G VY ++ L
Sbjct: 866 VIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLC 925
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + V+D +++ MEE G P++ NS++K + ++ + P
Sbjct: 926 KCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEE 985
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ + + R EE F L+ MR +G +P DTY LI F++ R + +++ E+
Sbjct: 986 TYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEEL 1045
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
NG DR+ Y ++ +G +A MKE + P T LL
Sbjct: 1046 RSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLL---------- 1095
Query: 432 ERQIASLKAHQPQSGQNT 449
++ K+ QP+ +N
Sbjct: 1096 --MVSYGKSGQPEEAENV 1111
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
R+ E + EM + G D+ + I+ Y + + ++ +++ ++ D + YN +
Sbjct: 931 RDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTL 990
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I + R ++ SLM M G+ P + TY SLI K R ++A + F+E+ G
Sbjct: 991 IIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGY 1050
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
YH + RT + LL M++ G +PT T +L+ + + Q
Sbjct: 1051 KLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAEN 1110
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V + G D Y+++I A G + + EMKE + P+
Sbjct: 1111 VLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPD 1158
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 151/362 (41%), Gaps = 59/362 (16%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRG-GETGP--SLVTKQTLLILIRRYCAVHDVGRAINA 125
+I IL K +K D A ++E R GE G S ++L+ + C +++ +
Sbjct: 671 EALIIILCKAKKLDAA---LEEYRSKGELGQFRSCTMYESLI----QECIQNELFDVASQ 723
Query: 126 FYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
++ RF G+E +QG++S CR + A HL+ ++ + IIL+
Sbjct: 724 IFSDMRFN---GVESSECLYQGMVSVYCRMDLPETAHHLL--------YHAEKNGIILDN 772
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
D+ + I+ Y K + K L +++ +
Sbjct: 773 -------------------------DISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKM 807
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DRKV+NA+IHA A + A ++ +M G +P V + N L++ L R+L+E
Sbjct: 808 DRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVI 867
Query: 302 DEMLQRGI----SPTIRTYHAFLDIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKF 355
E+ G+ S + T AF + G EV + M+ G PT Y ++++
Sbjct: 868 QELQDMGLKISKSSILLTLEAF---AQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLL 924
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ ++ +V + E+ E G PD +++ + Y ++++ L P+
Sbjct: 925 CKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDE 984
Query: 416 KT 417
+T
Sbjct: 985 ET 986
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 130/332 (39%), Gaps = 23/332 (6%)
Query: 21 KIEECGIKVSSE---LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
++++ G+K+S L E + N +E + K +GY + Y M+ +L K
Sbjct: 869 ELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYN--GMKAAGYFPTMHVYRIMLRLLCK 926
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
++ ++ EM P L ++L L Y + D + +
Sbjct: 927 CKRVRDVETMLCEMEEAGFQPDLQICNSILKL---YLGIEDFKSMGIIYQKIQDASLKPD 983
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS------SRE 191
E + L+ CR + ++ LM NK + L+ + ++I + +
Sbjct: 984 EETYNTLIIMYCRDRRPEEGFSLM--NK----MRSLGLEPKLDTYRSLITAFNKQRMYEQ 1037
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE ++ E+ G D + ++ Y + + K L MK GIE + ++
Sbjct: 1038 AEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMV 1097
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ K ++A +++K++ GV + + Y+S+I K + EM + GI P
Sbjct: 1098 SYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEP 1157
Query: 312 TIRTYHAFLDIIRTGE---EVFGLLESMRKMG 340
R + F+ E E LL +++ G
Sbjct: 1158 DHRIWTCFIRAATLSEGTNEAIVLLNALQDAG 1189
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 42/232 (18%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y+T+I + GK + D A + +M+ P VT L+ + + V +
Sbjct: 421 GFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEA 480
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
++ G++ SAL C Y
Sbjct: 481 ANVMSEM-------LDAGVKPTLHTYSALICAYAKA------------------------ 509
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G EAE + M + GI D +++S ++ + + + K + L+ +M R G
Sbjct: 510 --------GKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREG 561
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEE-KGVAPNVVTYNSLIKPLC 289
D +Y ++HAL + + +++ MEE G+ P V++ + L+K C
Sbjct: 562 FTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVIS-SVLVKGGC 612
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 20/433 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D+M P LVT T ++ C
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT---VVNGLCKRG 237
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A++ ++ K + + ++ LC+YK++ DA +L NK + P + ++
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP-DVFTY 296
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ CN G +A R+ +M +R I +VV+FS +I + K L + +L+D+M
Sbjct: 297 SSLISCLCN-YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D Y+++I+ + +A + + M K PNVVTY++LIK CKA++++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 296 EARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
E + F EM QRG+ TY H F R + + + M +G P TY +L
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + + V+ + + PD +Y +I + GK+E+ + + + K +
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 412 LPEPKTDELLQDWSYNKQFVERQIASLKAHQ-----PQSGQ-NTRVISKKSDQDREFLQQ 465
P + K E + LK + P SG NT + ++ D DRE
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE--AS 592
Query: 466 PETRRVVRHQGFS 478
E + +R GF+
Sbjct: 593 AELIKEMRSCGFA 605
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 172/404 (42%), Gaps = 53/404 (13%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K+ KF+ +L ++M+ L T I I +C + A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS---IFINCFCRRSQLSLAL 138
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F F T +
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + +M QRG D+V++ +++ K ++ L L +M++
Sbjct: 199 FLHN------KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC-------- 289
IE D +YN +I L K + + DA++L M+ KG+ P+V TY+SLI LC
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 290 ---------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
K KL EA + +DEM++R I P I TY + ++
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 322 --IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ +E + E M C P TY LIK F + ++ +++ E+S+ G +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+YT LIH F + A + +M + P T +L D
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA+ L M + P++V +N L+ + K K + ++M GIS + TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F++ ++ +L M K+G +P T L+ + ++ + + +++ E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA +M ++ P+ T
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 9/240 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K ++ + L EM + VT TL I + D A F
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL---IHGFFQARDCDNAQMVFK 457
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
I + LL LC+ + A + + + + ++NI++ G C
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA- 516
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + ++ +S +G+ +V++++ +IS + + + + L +MK G + Y
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I A + + + L+K M G A + T L+ + +LD ++F +ML
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD---KSFLDMLS 632
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 168/383 (43%), Gaps = 26/383 (6%)
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
AI+ + +D +L +M P++ TL I + +C + V + +
Sbjct: 101 AIVKMGQYYDVVISLSKQMELVGLSPNI---YTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNII 186
I F L++ LC+ A L C DV+ +NT I+NG C I
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT-----IINGLCKI- 211
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + A + +M + G ++V++S +I + R +++ L +F MK GI D Y
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I L K K+A +L+ M + P++VT+N L+ CK K+ EA M +
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 307 RGISPTIRTYHAFL-------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
G+ P + TY + + D++ E L M GC+P +Y +LI + + +
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVV----EARKLFHVMITKGCKPNIFSYNILINGYCKAK 387
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ +++NE+ G P+ SY LIH GKL EA + M LP+ T
Sbjct: 388 RIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYS 447
Query: 420 LLQDWSYNKQFVERQIASLKAHQ 442
+L D + ++ + +A Q
Sbjct: 448 ILLDGFCKQGYLGKAFRLFRAMQ 470
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 169/366 (46%), Gaps = 24/366 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + T+I L KV +F A L D+M P + T T+ I C + +
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTI---INGLCKIGET 214
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK------DVFPFNTK 173
A + + + L+ +LCR + V +A + K D+F + +
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS- 273
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ G C +EA + EM+ I D+V+F+ ++ + K + + L +
Sbjct: 274 ----LIQGLCKF-SRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT 328
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M MG+E + Y+++++ + V +A L M KG PN+ +YN LI CKA++
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388
Query: 294 LDEARQAFDEMLQRGISPTIRTY----HAFLDI--IRTGEEVFGLLESMRKMGCQPTNDT 347
+DEA Q F+EM+ +G++P +Y H F + +R +++F +M G P T
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF---RNMCTNGNLPDLFT 445
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ F + G F+++ + P+ YT L+HA+ +G ++A + + E+
Sbjct: 446 YSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELF 505
Query: 408 EKQLLP 413
+ L P
Sbjct: 506 VQGLQP 511
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 10/352 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K+ + A L+ +M P++VT TL I C V A++ F
Sbjct: 201 YNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL---IDSLCRDRLVNEALDIFS 257
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + I + L+ LC++ ++A L+ + ++ P + +FN++++ +C
Sbjct: 258 YMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP-DIVTFNVLVDTFCKE 316
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA V M++ G+ +VV++S ++ YS ++ + +LF M G + +
Sbjct: 317 -GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ K + + +A+ L M +G+ PN V+YN+LI C+ KL EA+ F M
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G P + TY LD + G + F L +M+ +P Y +L+ +
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ K+++E+ G P YT +I+ L G L+EA + + M+ P+
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 208 VVSFSCIISCYSKARNLHKV-LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++ F+ ++S K + V + L QM+ +G+ + + ++ + + V S++
Sbjct: 92 IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
+ + G+ P +VT+ +LI LCK + +A + FD+M+ +G P + TY+ ++ + +
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211
Query: 326 GEEVF--GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
GE GLL+ M + GCQP TY LI R R +++ + G PD +Y
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQP 443
T+LI L + +EA EM ++P+ T +L D + V + LK
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT-MT 330
Query: 444 QSGQNTRVISKKS 456
+ G V++ S
Sbjct: 331 EMGVEPNVVTYSS 343
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 162/368 (44%), Gaps = 25/368 (6%)
Query: 21 KIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKV 78
K+EE G + + S ++ + D A F + K G + Y ++I L K
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-KAKGISPDIFTYTSLIQGLCKF 281
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
++ A AL++EM P +VT +L+ +C V A+ +
Sbjct: 282 SRWKEASALLNEMTSLNIMPDIVTFN---VLVDTFCKEGKVSEALGVLKTMTEMGVEPNV 338
Query: 139 EDFQGLLSALCRYKNVQDAE---HLMF---CNKDVFPFNTKSFNIILNGWCNIIGSSR-- 190
+ L+ + +V +A H+M C ++F S+NI++NG+C + R
Sbjct: 339 VTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF-----SYNILINGYCK---AKRID 390
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA +++ EM +G+ + VS++ +I + + L + LF M G D Y+ ++
Sbjct: 391 EAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILL 450
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
K + A L ++M+ + PN+V Y L+ +CK+ +AR+ F E+ +G+
Sbjct: 451 DGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQ 510
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P ++ Y ++ + + G +E +M GC P +Y ++I+ + + +
Sbjct: 511 PHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLL 570
Query: 368 WNEISENG 375
E+ + G
Sbjct: 571 VGEMRDRG 578
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 182/400 (45%), Gaps = 13/400 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y T+I L K + A L+ EM P+LV L I C V
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSAL---IDGLCKDGFV 211
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ + + L+ C Q+ L+ ++V P + +FNI
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP-DDYTFNI 270
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G EA+ V MS+RG D+V+++ ++ Y N+H+ LF++M +
Sbjct: 271 LIDALCKE-GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E D YN +I K ++V +A+ L K + K + P + +YNSLI LC + ++
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ DEM P + TY+ +D + + G E G+L M K G +P TY ++
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 355 FSRWRQFGNVFK-VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R NV K ++N + ++G PD +Y LI+ ++EA + EM+ K L+P
Sbjct: 450 YC-LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ + L D N + + L SGQ+ VI+
Sbjct: 509 DIASYNSLIDGLCNLGRIP-HVQELLDEMCDSGQSPDVIT 547
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 176/418 (42%), Gaps = 77/418 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I L K + A ++ M P +VT L+ YC+ +V A F
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM---EGYCSRENVHEARELFN 324
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN- 184
+ + ++ L+ C+ K V +A L CNK++ P S+N +++G CN
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP-TIASYNSLIDGLCNS 383
Query: 185 ------------IIGSSR---------------------EAERVWMEMSQRGICYDVVSF 211
+ GS++ EA V + M ++G+ ++V++
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ ++ Y N++ +F++M + G+E D YN +I+ K +V +AI L K M
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY--------------- 316
K + P++ +YNSLI LC ++ ++ DEM G SP + TY
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK 563
Query: 317 -------------------HAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKK 354
HA +D + GE++ ++++ + GC P TY +LI
Sbjct: 564 AISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA 623
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ FG + +++ +N PD ++ +I L + ++A + EM + L+
Sbjct: 624 LCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +FN I+NG+C I G +A + +G +D ++ +I+ SK + L L
Sbjct: 124 NLVTFNTIINGFC-INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M++ ++ + +Y+A+I L K V DA+ L + E+G+ + VTYNSLI C
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ E Q +M++ + P T++ +D + + G E G+L M K G +P T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L++ + +++N + + G PD +Y LI ++EA + E+
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 408 EKQLLP 413
K L+P
Sbjct: 363 NKNLVP 368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 38/329 (11%)
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
CR++NV DA VFP S L G +G A ++ ++ +GI +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 209 VSFSCIISCYSKARN-----------------------------------LHKVLRLFDQ 233
+F+ +I+CY + + K L
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G D+ Y +I+ L+K +K A+ L++ ME+ V PN+V Y++LI LCK
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ +A ++ +RGI TY++ +D G +EV LL M + P + T+ +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + V +S+ G PD +Y AL+ + EA + + M ++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLK 439
L P+ +L D + V+ + K
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H + R V DA++ M P ++ L+ + + A F ++ +GIS
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 311 PTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P+I T+ ++ F LL ++ K G QP T+ +I F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G D+ +Y LI+ L NG+++ A EM++ + P
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 8/332 (2%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
++ EM G P T T IL+ D+ + + F KR A + + +++
Sbjct: 190 VLKEMESGGVEP---TVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVIN 246
Query: 147 ALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
A CR NV+ A + C + N +++ ++NG+C I G AE + +M RG+
Sbjct: 247 AYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKI-GQIEAAEMLLTDMQLRGVG 305
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++ + F+ +I Y + + K L + M+RMGI+ D YN + L + ++DA L
Sbjct: 306 HNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+ M E GV N V+Y +LI K + EAR+ F +M +G P++ TY+ +D I+
Sbjct: 366 LHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIK 425
Query: 325 TGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+G E + M K G P TY L+ + +++ E+ + G P+ +
Sbjct: 426 SGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
YTALI L G+ EEA Q+Y M L P+
Sbjct: 486 YTALISGLAKEGRSEEAFQFYDNMLAAGLTPD 517
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 5/321 (1%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN-VQD 156
P +T + +++ +C + A R + + LL R KN +
Sbjct: 128 PGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE L ++ I+++G + G + E V+ E+ ++ + DV +S +I+
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGL-STAGDISKVESVFDEIKRKNVAGDVYFYSAVIN 246
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
Y +A N+ + +FD+ GIE + + Y A+I+ K ++ A L+ M+ +GV
Sbjct: 247 AYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGH 306
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLL 333
N + +N++I C+ +D+A + M + GI + TY+ L + E+ LL
Sbjct: 307 NQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLL 366
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M + G + +Y LI S+ +++ ++ G+ P +Y +I +
Sbjct: 367 HIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKS 426
Query: 394 GKLEEAHQYYMEMKEKQLLPE 414
G + EA ++ EM++K L+P+
Sbjct: 427 GSIREAERFKKEMEKKGLVPD 447
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 141 FQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
F ++ CR+ V A + M DV+ +NT + G C + +A++
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNT-----LACGLCRV-NRMEDAKK 364
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ M++ G+ + VS++ +IS +SK ++ + RLF M+ G YN +I
Sbjct: 365 LLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYI 424
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++A K ME+KG+ P+V TY +L+ C K+D A + F+EM QRG P +
Sbjct: 425 KSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVV 484
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
Y A + + + G EE F ++M G P + Y ML+
Sbjct: 485 AYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 5/268 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + R Y +I K+ + + A L+ +M+ G + + T+ I YC
Sbjct: 267 NGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM---IDGYCRHGM 323
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNI 177
V +A+ +R + + + L LCR ++DA+ L+ ++ N S+
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ + G EA R++ +M +G VV+++ +I Y K+ ++ + R +M++
Sbjct: 384 LIS-IHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKK 442
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y A++H V A+ L + M+++G PNVV Y +LI L K + +EA
Sbjct: 443 GLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRT 325
Q +D ML G++P Y + + T
Sbjct: 503 FQFYDNMLAAGLTPDDTLYSMLVGSLHT 530
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 13/289 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFP-----FNTKSFNIILNGWCNIIGSSREAERVWME 198
++ C+ + DA L+ D P N +N +L+ + +R AE V E
Sbjct: 139 VVDGFCKAGRMDDARRLL----DEMPRHGVKLNACCYNPLLDTYTRQKNDARVAE-VLKE 193
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ V +++ ++ S A ++ KV +FD++KR + D Y+AVI+A +
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+ A + G+ PN TY +LI CK +++ A +M RG+ ++
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D R G ++ + M +MG Q TY L R + + K+ + ++ENG
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+ SYT LI G + EA + + +M+ K P T ++ D
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 422
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
G L+ A L K++ ++ + ++ CKA ++D+AR+ DEM + G+
Sbjct: 111 GHLLPAAELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACC 170
Query: 316 YHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ LD + V +L+ M G +PT TY +L+ S V V++EI
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D Y+A+I+A G + A + + E + P +T
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERT 275
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 176/369 (47%), Gaps = 10/369 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I L KV KF A ++++M+ PS++T T+ I YC + +A
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI---IDGYCKAGKMFKADALLK 288
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ CR +NV A+ + + + P N ++N ++NG C+
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP-NVVTYNSLINGLCSN 347
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA + +MS G+ +VV+++ +I+ + K + L + + D + + G+ +
Sbjct: 348 -GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N +I A K + DA L M + GV PNV TYN LI C+ + EAR+ EM
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 306 QRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G+ + TY+ +D + + GE + LL+ M ++G P++ TY LI + R
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
V + + G + +Y LI GKLEEA++ EM EK L+P T ++L+
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586
Query: 423 DWSYNKQFV 431
D K F+
Sbjct: 587 DEMMEKGFI 595
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNII 186
R + V + F +++ LC+ Q A ++ +D+ F + ++N I++G+C
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVV---EDMKAWGFSPSVITYNTIIDGYCKA- 277
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +A+ + EM + I + ++F+ +I + + N+ ++F++M+R G++ + Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++I+ L + +A+ L M G+ PNVVTYN+LI CK + L EAR+ D++ +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397
Query: 307 RGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG++P + T++ +D + G ++ F L M G P TY LI F R
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K+ E+ NG D +Y L+ AL G+ +A + EM E L P T L D
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517
Query: 424 WSY 426
+
Sbjct: 518 GYF 520
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 11/270 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I L K D A L D+M G P++VT L I +C
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL---INGFCKK 382
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ A + A + F L+ A + + DA L M + V P N +
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP-NVST 441
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G+C G+ +EA ++ EM G+ D+V+++ ++ K K +RL D+M
Sbjct: 442 YNCLIVGFCRE-GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+G+ YNA+I + A+++ ME+KG N+VTYN LIK C KL
Sbjct: 501 FEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKL 560
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+EA + +EML++G+ P TY DI+R
Sbjct: 561 EEANRLLNEMLEKGLIPNRTTY----DILR 586
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 162/373 (43%), Gaps = 26/373 (6%)
Query: 49 FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI 108
+F W K+ G H+ ++ ++ +L + ++ AL+D + +L +
Sbjct: 91 LCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSV 150
Query: 109 LIRRYCAVHDVGRAINAFYAY-KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
L CA + + +AY K + + +E F R + + CN +
Sbjct: 151 LGSWGCANSIIVDML--VWAYVKNGEMDLALEGFD-------RAGDYGFRLSALSCNPML 201
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+++ G ++ E V+ EM +R I +VV+F +I+ K K
Sbjct: 202 V-------SLVKEGRIGVV------ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ + MK G YN +I K + A +L+K M K + PN +T+N LI
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
C+ + A++ F+EM ++G+ P + TY++ ++ + + +E GL + M MG +P
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI F + + ++ ++I + G P+ ++ LI A G++++A
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428
Query: 405 EMKEKQLLPEPKT 417
M + + P T
Sbjct: 429 MMLDTGVCPNVST 441
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 163/358 (45%), Gaps = 18/358 (5%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG KFD A +L D +R SL+ + +++ V RA + + +
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SFNIILN-------GW 182
F V + + L++A K +DA + K+V T ++N ILN W
Sbjct: 172 ADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPW 231
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
II + +M G+ D+ +++ +ISC + L LF+++K G D
Sbjct: 232 AKIIA-------LVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPD 284
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YNA++ K R K+A+ ++K ME P+VVTYNSL+ + L++A
Sbjct: 285 AVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKR 344
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M+ +GI P + TY L + G+E + E MRK+GC+P T+ LIK +
Sbjct: 345 KMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRG 404
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+F + KV+ EI PD ++ L+ NG E + EMK + PE T
Sbjct: 405 KFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDT 462
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 136/310 (43%), Gaps = 36/310 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR---- 112
K+S +A ++T+I+ G+ FD A A M P L T +L + R
Sbjct: 452 KRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLW 511
Query: 113 ------YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
+ D G N + LL A Y N ++ E + ++
Sbjct: 512 EQSEKVLAEMKDGGCKPNEV-------------TYSSLLHA---YANGREVERMNALAEE 555
Query: 167 VFPFNTKSFNIILNGWCNIIGSSR-----EAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
++ K+ ++L ++ +S+ E ER ++E +RGI DV + + ++S Y +
Sbjct: 556 IYSGTIKTHAVLLKTL--VLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRK 613
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + K + + M G+ YN++++ ++ + + + + +KG+ P+V++Y
Sbjct: 614 KMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISY 673
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRK 338
N +I C+ +DEA++ +EM P + TY+ F+ E ++ M K
Sbjct: 674 NIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIK 733
Query: 339 MGCQPTNDTY 348
GC+P ++TY
Sbjct: 734 QGCKPNHNTY 743
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 42/369 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I + G KF+ + E++ + P +VT TLL + + +V F
Sbjct: 393 FNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVS---GVFE 449
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
KR +FA + F L+SA G C G
Sbjct: 450 EMKRSRFAPERDTFNTLISAY--------------------------------GRC---G 474
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
S +A + M + G+ D+ +++ +++ ++ + ++ +MK G + + Y+
Sbjct: 475 SFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYS 534
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+++HA A GR V+ +L + + + + V +L+ K L E +AF E +R
Sbjct: 535 SLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKR 594
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GISP + T +A L I + + +L M + G + +Y L+ +SR F
Sbjct: 595 GISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKS 654
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQD 423
+++ EI + G PD SY +I+A N ++EA + EMK +P+ T + +
Sbjct: 655 EQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAA 714
Query: 424 WSYNKQFVE 432
++ + FVE
Sbjct: 715 YAADSMFVE 723
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 25/316 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y+ ++A L + ++ + ++ EM+ G P+ VT +LL +
Sbjct: 488 EAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL-------HAY 540
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA------EHLMFCNKDVFPFN 171
GR + A ++ I+ LL L + D L F + + P
Sbjct: 541 ANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDV 600
Query: 172 TKSFNIILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
T S N +I G + +A + M + G+ + S++ ++ YS+ N HK
Sbjct: 601 TTS-----NAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSE 655
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++F ++ GIE D YN VI+A + ++ +A +++ M+ P+VVTYN+ I
Sbjct: 656 QIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAY 715
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTN 345
EA M+++G P TY++ +D ++ +E ++++ + Q +
Sbjct: 716 AADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLDPQISE 775
Query: 346 DTYIMLIKKFS-RWRQ 360
D L+++ + +W Q
Sbjct: 776 DEKSRLLERIAKKWSQ 791
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 164/401 (40%), Gaps = 51/401 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G+ Y+ ++ + GK R+ A ++ +M PS+VT +L+ R +
Sbjct: 277 KVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLL 336
Query: 117 HDVGRAINAFYAYKRFKFAVGIE-DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-- 173
D KR GI+ D + L + N E M +++ K
Sbjct: 337 EDA-------LVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPN 389
Query: 174 --SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+FN ++ + + G E +V+ E+ D+V+++ +++ + + +V +F
Sbjct: 390 ICTFNALIKMYGDR-GKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVF 448
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++MKR +R +N +I A + A++ K M E GV+P++ TYN+++ L +
Sbjct: 449 EEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARG 508
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG----------EEVFG--------LL 333
+++ + EM G P TY + L G EE++ LL
Sbjct: 509 GLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLL 568
Query: 334 ESM--------------------RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+++ RK G P T ++ + R + ++ N + E
Sbjct: 569 KTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYE 628
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+G +SY +L++ ++ Q + E+ +K + P+
Sbjct: 629 SGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPD 669
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 175/372 (47%), Gaps = 14/372 (3%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G H+ + MI + RK A++++ P+ +T TL I +C
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTL---INGFCLEGR 154
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSF 175
V A+ K+ + L++ LC V +A L+ ++ V N ++
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA--LVLIDRMVKYGCEANEITY 212
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+LN C G++ A ++ +M +R I VV +S +I K NL L LF++M+
Sbjct: 213 GPVLNRMCKS-GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI+ D Y+++I L D +++ M + + PNVVT+++LI K KL
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIML 351
EA++ ++EM+ RGI+P TY + +D R G E +L+ M GC+P TY +L
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG-EANQMLDLMVSKGCEPNIVTYSIL 390
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + ++ N +++ EIS G D +Y L+ +GKL A + + EM + +
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450
Query: 412 LPEPKTDELLQD 423
P T +L D
Sbjct: 451 PPSVVTYGILLD 462
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 167/370 (45%), Gaps = 23/370 (6%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C ++ A++ F + + + ++ LC D ++ +
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
++ P N +F+ +++ + G EA+ ++ EM RGI D +++S +I + K L
Sbjct: 309 NIIP-NVVTFSALIDVFVKE-GKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ ++ D M G E + Y+ +I++ K + V + + L + KG+ + VTYN+L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
+ C++ KL+ A++ F EM+ RG+ P++ TY LD + GE + + E M+K
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
Y ++I + + + ++ +S G PD +Y +I L G L EA
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREF 462
+ +MKE P D +YN ++AH SG + V + + R F
Sbjct: 547 FRKMKEDGCAP--------SDCTYN--------ILIRAHLGGSGVISSVELIEEMKMRGF 590
Query: 463 LQQPETRRVV 472
T ++V
Sbjct: 591 AADASTIKMV 600
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 15/348 (4%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRND--WE-AAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
N++E GIK S ++ + ND W+ A G+ + + +I +
Sbjct: 268 NEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN--IIPNVVTFSALIDVFV 325
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K K A L +EM P +T +L I +C + +G A
Sbjct: 326 KEGKLLEAKELYNEMVARGIAPDTITYSSL---IDGFCKENRLGEANQMLDLMVSKGCEP 382
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
I + L+++ C+ K V + L FC + +T ++N ++ G+C G A+
Sbjct: 383 NIVTYSILINSYCKAKRVDNGMRL-FCEISSKGLVADTVTYNTLVQGFCQS-GKLNVAKE 440
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ EM RG+ VV++ ++ L K L +F++M++ + +YN +IH +
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMC 500
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V DA SL S+ KGV P+V+TYN +I LCK L EA F +M + G +P+
Sbjct: 501 NASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDC 560
Query: 315 TYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
TY+ + G V L+E M+ G T M++ S R
Sbjct: 561 TYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM GI +++ + + +I+C+ + R L + + + G E + ++ +I+
Sbjct: 94 EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A++L+ M E PNVVT N+LI LC ++ EA D M++ G TY
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213
Query: 318 AFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+ + ++G L M + + + Y ++I + + ++NE+
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G D +Y+++I L +G+ ++ + EM + ++P T L D
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID 322
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG +I EA ++ M Q ++ FS + S ++ + VL +M GI
Sbjct: 43 NGIVDI--KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGI 100
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E + N +I+ + R + A S++ + G PN +T+++LI C ++ EA
Sbjct: 101 EHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVA 160
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
D M++ P + T + ++ + G E L++ M K GC+ TY ++ +
Sbjct: 161 LVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMC 220
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ ++ ++ E Y+ +I +L +G L++A + EM+ K +
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGI 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G T Y+T++ + K + A L EM PS+VT IL+ C ++
Sbjct: 414 GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYG---ILLDGLCDNGEL 470
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFN 176
+A+ F ++ + +GI + ++ +C V DA L FC+ K V P + ++N
Sbjct: 471 QKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL-FCSLSVKGVKP-DVLTYN 528
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ G C GS EA+ ++ +M + G +++ +I + + + L ++MK
Sbjct: 529 VMIGGLCKK-GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKM 587
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLM 266
G D V+ L+ GRL K + ++
Sbjct: 588 RGFAADASTIKMVVVMLSDGRLDKTFLDML 617
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 14/353 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI +L K F A L+DEMR ++ Q +L LIRRY A + F
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVP---ISAQLILALIRRYVRAEMPSEASDLFR 204
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ ++ G D LL AL + + +A+ + K VF + + +++ WC
Sbjct: 205 RME--EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCR 262
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EAERV+ EM Q G+ +V +++ +I +A + + L QM G +
Sbjct: 263 S-GRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTA 321
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA--RKLDEARQAFD 302
+NA++ A K + + + M + G P+++TYN L++ C LD A +
Sbjct: 322 TFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLT 381
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+ +G P T++ L ++ V L E M+++ C+P TY +L++ F+ +
Sbjct: 382 RMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEK 441
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
V ++ ++ G P+ ++Y ALI A G + AH EM E++ L
Sbjct: 442 SMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKAL 494
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D FN ++L ++G+ A +++ M + +VV+++ ++ ++ +
Sbjct: 388 CIPDCHTFNPM-LKLVL-----VLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEK 441
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTY 281
++ VLR+ M G+E + Y A+I A +G + ++L + +EEK + P Y
Sbjct: 442 SMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVY 501
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG 308
+ ++ L KA +L + + M+ RG
Sbjct: 502 DMVLALLRKAGQLRRHEELVEMMVDRG 528
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMR 337
Y ++I L K AR DEM +R + + + A + E E L M
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 207
Query: 338 KMGC-QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ G P T L+ S+ R +++ ++ PD YT L+HA +G+L
Sbjct: 208 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSY-KSVFTPDVVLYTTLVHAWCRSGRL 266
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+EA + + EM++ + P T + D Y V R
Sbjct: 267 DEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPR 303
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 172/365 (47%), Gaps = 10/365 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L K+ + A ++ ++ G +V I+I C V
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYN---IIINSLCKDKAV 215
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + F L+ C +++A L K++ P + +F+I
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP-DVYTFSI 274
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G+ A+ + M ++G+ DVV++S ++ Y ++K +F M R+
Sbjct: 275 LVDALCKD-GNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL 333
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ YN +I+ L K ++V +A+SL K M KG+AP+ VTYNSLI LCK ++ A
Sbjct: 334 GVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYA 393
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKK 354
Q DEM GI I TY++ +D++ + L++ ++ G QP+ TY +LI
Sbjct: 394 WQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + N V+ ++ G + +Y +I+ L G EA +M+ ++P+
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513
Query: 415 PKTDE 419
T E
Sbjct: 514 AVTYE 518
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 174/385 (45%), Gaps = 17/385 (4%)
Query: 74 ILGKVRK-----FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
ILG + K + TA +L ++ P++VT IL+ YC + ++ A + F
Sbjct: 63 ILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFN---ILVNCYCHLGEMTFAFSIFAK 119
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNI 185
+ + F L++ +C +++A H F + + F + S+ ++NG C
Sbjct: 120 ILKLGYHPTTITFNTLINGICLNGKLKEALH--FHDHVIALGFHLDQVSYRTLINGLCK- 176
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
IG +R A ++ ++ + + DVV ++ II+ K + + +L+ +M I D
Sbjct: 177 IGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT 236
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N++I +K+A L M K + P+V T++ L+ LCK + A+ M+
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296
Query: 306 QRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G+ P + TY + +D ++ + + +M ++G P +Y ++I + +
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVD 356
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
++ E+ G PD +Y +LI L G++ A Q EM + + T L
Sbjct: 357 EALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Query: 423 DWSYNKQFVERQIASLKAHQPQSGQ 447
D +++ IA +K + Q Q
Sbjct: 417 DVLCKNHHIDKAIALVKKIKDQGIQ 441
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 154/332 (46%), Gaps = 15/332 (4%)
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN----KDVFPFNTK 173
DV +++F+ R + I +F +L ++ + N + + K + P
Sbjct: 37 DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITP-TIV 95
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FNI++N +C++ G A ++ ++ + G ++F+ +I+ L + L D
Sbjct: 96 TFNILVNCYCHL-GEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ +G D+ Y +I+ L K + A+ ++K +E K V +VV YN +I LCK +
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+ +A Q + EM+ + ISP + T+++ + ++ +E FGL M P T+ +
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI 274
Query: 351 LIKKFSRWRQFGNVFKVWNEIS---ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
L+ + GN+ + N ++ + G PD +Y++L+ L ++ +A + M
Sbjct: 275 LVDALCKD---GNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
+ P + ++ + + V+ ++ K
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFK 363
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT +L+ YC V++V +A + F R A + +++ L + K V +A
Sbjct: 302 PDVVTYSSLM---DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEA 358
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L C K + P +T ++N +++G C + G A ++ EM GI D+++++ +I
Sbjct: 359 LSLFKEMCCKGIAP-DTVTYNSLIDGLCKL-GRISYAWQLVDEMHNNGIPADILTYNSLI 416
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K ++ K + L ++K GI+ YN +I L KG +K+A + + + KG +
Sbjct: 417 DVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYS 476
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
N TYN +I LCK +EA +M GI P TY +
Sbjct: 477 VNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETII 521
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A T Y+++I L K+ + AW L+DEM ++T + LI C H +
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS---LIDVLCKNHHI 425
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+AI K + + L+ LC R KN QD + + N ++N
Sbjct: 426 DKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG--YSVNAWTYN 483
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
I++NG C G EAE + +M GI D V++ II
Sbjct: 484 IMINGLCK-EGLFNEAEVLLSKMENNGIIPDAVTYETII 521
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 180/425 (42%), Gaps = 61/425 (14%)
Query: 47 AAFTFFLWAGKQSGYAHSTRE---------YHTMIAILGKVRKFDTAWALIDEMRGGETG 97
A + AG+ RE Y ++I L K K D A+ L+DEMR
Sbjct: 3 CALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIP 62
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P + + I+ C G A+ F K I F L+ AL + V++A
Sbjct: 63 PGVAVHNGV---IKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 158 EHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+ M + P N ++ ++NG C R E + + M++ G C +V+++S +
Sbjct: 120 FQIFESMHTSSQCLP-NVVTYTTVINGLCKDGKLDRAIELLDL-MNETGCCPNVITYSVL 177
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+ KA K L +M R G + D +YN +++ L K R + +A+ L++ M G
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------------- 320
P VVTYNSL++ C+++++D A + M +RG P + Y+ +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 321 ------------DIIRTGEEVFGL------------------LESMRKMGCQPTNDTYIM 350
D+I + GL LE M++ GC P TY +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I+ R R+ + + ++ PD SS++ +I +L + L+ A++ + M E++
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 411 LLPEP 415
P P
Sbjct: 418 CKPNP 422
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 13/295 (4%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ LC+ + A L+ +D P N ++ G C G +A + +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKA-GRFGDALGYFKTV 91
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKGR 257
+ D+++F+ ++ K+ + + ++F+ M +C V Y VI+ L K
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS-QCLPNVVTYTTVINGLCKDG 150
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ AI L+ M E G PNV+TY+ L++ LCKA + D+ EM +RG P + Y+
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+ + R +E L++ M + GC PT TY L++ F R +Q F++ +SE
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDW 424
G PD +Y +I L + +L++A +M + +P+ T D L +DW
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y ++ L K + D + L+ EM P ++ TLL C
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL---NGLCKSR 220
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+ A+ R + + L+ CR K V A L+ C DV +N
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280
Query: 172 TKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKAR------N 223
T ++ G C +R +A+ + +M DV+++S II K
Sbjct: 281 T-----VIAGLCR---DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L + + MK+ G + Y VI L + R + A++L++ M + V P++ +++
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE------VFGLL-ESM 336
+I LCK+ LD A + F M +R P Y A +D + G E VF L+ ES
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
R P TY ++ + ++ + PD +SY ALI L +
Sbjct: 453 R-----PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 397 EEAHQYYMEMKEK 409
EEA++ + ++ K
Sbjct: 508 EEAYELFQAVEAK 520
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 16/278 (5%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++ +I KA L + L D+M+ GI V+N VI L K DA+ K++
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-LQRGISPTIRTYHAFLD-IIRTG- 326
P+++T+N L+ L K+ +++EA Q F+ M P + TY ++ + + G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ LL+ M + GC P TY +L++ + + F + E++ G PD Y
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER-----QIASLK 439
L++ L + +L+EA + M P T + L++ + +KQ V+R Q+ S +
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ-VDRAFRLIQVMSER 270
Query: 440 AHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRVV 472
P VI+ + D + L+Q R V
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 17/232 (7%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ L + A+ L + EE+ V PN TY SLI LCKA KLD+A + DEM
Sbjct: 2 NCALNLLVRAGQHGQAVQLFR--EERCV-PNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 307 RGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RGI P + ++ + + + G + G +++ C P T+ +L+ + +
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 364 VFKVWNEISENGNG-PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----- 417
F+++ + + P+ +YT +I+ L +GKL+ A + M E P T
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 418 DELLQDWSYNKQFVERQIASLKAHQP-----QSGQNTRVISKKSDQDREFLQ 464
+ L + +K F Q + + QP + N S++ D+ E +Q
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 125/272 (45%), Gaps = 14/272 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR---RYC 114
+ G Y+T+IA L + + D A AL+ +M P ++T T++ + R
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
A + A K+ + ++ LCR + Q A L+ + +V P +
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP-DL 387
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
SF++++ C A +++ MS+R + V+++ +I SK + K +R+F+
Sbjct: 388 SSFSMVIGSLCKS-HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 233 QMK---RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
M R G+ YN+V+ L +++A+ +++ M K P+ +Y +LI+ LC
Sbjct: 447 LMVESFRPGV----ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLC 502
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ ++EA + F + +G + + Y+ ++
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 13/356 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L + D A AL+ M + +L+R CA +A+
Sbjct: 80 YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + + L+ LC V A LM C + P N ++ +L G+C
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP-NVVVYSSLLQGYCKS 198
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + +V++EMS++GI DVV ++ +I K K + D M R G+E +
Sbjct: 199 -GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ + K VK+AI ++K M EKGVAP+VVTYN+LIK L ++DEA +EM+
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 306 QRG---ISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
RG + P + T+++ + DI R + F + M + GC TY +LI R
Sbjct: 318 -RGKNIVKPNVVTFNSVIQGLCDIGRM-RQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ ++ +E++ G PD +Y+ LI +++ A M+++ + PE
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 24/416 (5%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K E+ ++ E GI+ + + S +L WE F+ ++ G Y +
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK-GIEPDVVMYTGL 226
Query: 72 IAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
I L KV K A ++D M RG E P++VT +LI C V AI
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLE--PNVVTYN---VLINCMCKEGSVKEAIGVLKKM 281
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNII 186
A + + L+ L + +A L M K++ N +FN ++ G C+I
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI- 340
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G R+A +V M + G ++V+++ +I + + K + L D+M +G+E D Y
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ +I K V A L+ +M ++G+ P + Y L+ +C+ ++ AR F+EM
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-D 459
Query: 307 RGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ Y + ++T +E LL+S+ G P TY ++I F++
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKE---LLKSIVDEGLTPDAVTYSIVINMFAKSGD 516
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
V +++ +G PD + + +LI G++ + + EM K + + K
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ AL RL A+ L++SM GV +VVTY +LI+ LC A ++D+A + EM
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ GI P + Y + LL+ K G RW G VF
Sbjct: 178 ESGIEPNVVVYSS-------------LLQGYCKSG----------------RWEDVGKVF 208
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
E+SE G PD YT LI +L GK ++AH M + L P T +L +
Sbjct: 209 V---EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265
Query: 426 YNKQFVERQIASLK 439
+ V+ I LK
Sbjct: 266 CKEGSVKEAIGVLK 279
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 49/320 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE--TGPSLVTKQTLLILIRRYCA 115
+ G A Y+T+I L V + D A L++EM G+ P++VT ++ I+ C
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV---IQGLC- 338
Query: 116 VHDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
D+GR AF + V + + L+ L R V+ A LM + + P
Sbjct: 339 --DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP- 395
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI--------------C----------- 205
++ +++I++ G+C + R AE + M RGI C
Sbjct: 396 DSFTYSILIKGFCKMWQVDR-AEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454
Query: 206 ---------YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
DVV++S +I KA +L L + G+ D Y+ VI+ AK
Sbjct: 455 FNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A ++K M G P+V ++SLI+ ++++ + EM+ + I+ +
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKII 574
Query: 317 HAFLDIIRTGEEVFGLLESM 336
+ E LL+S+
Sbjct: 575 STLSTSLVASNEGKALLQSL 594
>gi|293336637|ref|NP_001167760.1| hypothetical protein [Zea mays]
gi|223943823|gb|ACN25995.1| unknown [Zea mays]
gi|414877894|tpg|DAA55025.1| TPA: hypothetical protein ZEAMMB73_945476 [Zea mays]
Length = 536
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 18/398 (4%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRN----DWEAAFTFFLWAGKQSGYAHSTREYHT 70
R+ + + GI + L EVL+ V N A T+F WA S S +
Sbjct: 82 RNVLHQALSSTGIGATMALSPEVLANVVNTSNLSGAATVTYFDWAVTNSKPPPSVHTCNI 141
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + FD + MR P L T L I++ A V RA+ +
Sbjct: 142 VIRALGRKKFFDYLDDALQIMRRNNIFPDLTT---LEIIMDSLVAARHVSRAVEVI-STD 197
Query: 131 RFKFAVGI-----EDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCN 184
+F F +G + F L+ LCR +V A L+ K++F ++ +N ++ GW
Sbjct: 198 QFGFGIGKTCHRKDAFTILIRCLCRRSHVGLASSLLQAARKELFGLDSNVYNDVMGGWAR 257
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
GS + + VW +M + G+ + VS +I + L+ F+ M
Sbjct: 258 F-GSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRVGQTEDALKAFEYMVHERYGPTTM 316
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I + I K M +K +PN+ TY+ +IK + R++ +A Q FD+M
Sbjct: 317 AYNVLIFNFIHIGDLDSCIKYYKDMLDKNCSPNIETYSKMIKAFLRGRRVADALQMFDDM 376
Query: 305 LQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
L +G+ P +F++ + T G L+ + RK GC + Y +L+++ +++ +
Sbjct: 377 LIQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKS 436
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G V +W E+ E G PD+ Y +++ L GK++ A
Sbjct: 437 GIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAA 474
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 8/277 (2%)
Query: 151 YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI---CYD 207
+ + DA +M N ++FP + + II++ SR E + + GI C+
Sbjct: 152 FDYLDDALQIMRRN-NIFP-DLTTLEIIMDSLVAARHVSRAVEVISTDQFGFGIGKTCHR 209
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+F+ +I C + ++ L ++ D VYN V+ A+ V +
Sbjct: 210 KDAFTILIRCLCRRSHVGLASSLLQAARKELFGLDSNVYNDVMGGWARFGSVDKLQEVWT 269
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG 326
M+E G+ PN V++ LI+ L + + ++A +AF+ M+ PT Y+ + + I G
Sbjct: 270 KMQEDGLVPNEVSHCHLIEGLGRVGQTEDALKAFEYMVHERYGPTTMAYNVLIFNFIHIG 329
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ + M C P +TY +IK F R R+ + ++++++ G P+ T
Sbjct: 330 DLDSCIKYYKDMLDKNCSPNIETYSKMIKAFLRGRRVADALQMFDDMLIQGVLPNTGMIT 389
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ I+ L G A Y + ++ + K +LL
Sbjct: 390 SFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLL 426
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + + +I LG+V + + A + M GP+ + +LI + +
Sbjct: 272 QEDGLVPNEVSHCHLIEGLGRVGQTEDALKAFEYMVHERYGPTTMAYN---VLIFNFIHI 328
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ I + + IE + ++ A R + V DA + + V P NT
Sbjct: 329 GDLDSCIKYYKDMLDKNCSPNIETYSKMIKAFLRGRRVADALQMFDDMLIQGVLP-NTGM 387
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N C G A ++ + + G + ++ ++ +K VL ++++M
Sbjct: 388 ITSFINPLCTF-GPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEM 446
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + D+++Y +++ L V A+S+++ G V Y+ L L + K+
Sbjct: 447 QECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKV 506
Query: 295 DEARQAFDEM 304
+ A F ++
Sbjct: 507 ETAYNLFKKV 516
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 12/298 (4%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILN 180
AF + R + + I F ++S LCR ++ A + KD+ + ++N +++
Sbjct: 178 AFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA---KDIKAWGLAPSVATYNSLID 234
Query: 181 GWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C G+ + + EM + GI V+F +I+ Y K N +R+F++MK+ G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I YN++I L V++ + LM+ ME+ G++PN +T+ ++K CK + +A
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
D M +R + P + Y+ +D+ R E+ + E+M K G P TY LI F
Sbjct: 355 DWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SR + + + +E+ E G D +Y LI AL G++ +A + EM E L P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 183/426 (42%), Gaps = 47/426 (11%)
Query: 48 AFTFFLWAGKQSG-YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A+ FL AG+ + ST + ++A L ++ D A P + T T+
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
I C + + +A + K + A + + L+ C+ + H+ K+
Sbjct: 198 ---ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254
Query: 167 VFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ +F +++NG+C ++ A RV+ EM Q+GI VV+++ +IS
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKN-SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 223 NLHKVLRLFDQMKRMG-----------------------------------IECDRKVYN 247
+ + ++L ++M+ +G +E D +YN
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + ++DA+++ ++M +KG++PNV TYN LI ++ A DEM ++
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GI + TY+ + + EV LL+ M ++G +P + TY +I+ F +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+++ + + + +Y I GK++EA+ EM +K L+P T E +++
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 425 SYNKQF 430
K +
Sbjct: 554 MMEKGY 559
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 12/298 (4%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILN 180
AF + R + + I F ++S LCR ++ A + KD+ + ++N +++
Sbjct: 178 AFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA---KDIKAWGLAPSVATYNSLID 234
Query: 181 GWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C G+ + + EM + GI V+F +I+ Y K N +R+F++MK+ G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I YN++I L V++ + LM+ ME+ G++PN +T+ ++K CK + +A
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
D M +R + P + Y+ +D+ R E+ + E+M K G P TY LI F
Sbjct: 355 DWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SR + + + +E+ E G D +Y LI AL G++ +A + EM E L P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 183/426 (42%), Gaps = 47/426 (11%)
Query: 48 AFTFFLWAGKQSG-YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A+ FL AG+ + ST + ++A L ++ D A P + T T+
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
I C + + +A + K + A + + L+ C+ + H+ K+
Sbjct: 198 ---ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254
Query: 167 VFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ +F +++NG+C ++ A RV+ EM Q+GI VV+++ +IS
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKN-SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 223 NLHKVLRLFDQMKRMG-----------------------------------IECDRKVYN 247
+ + ++L ++M+ +G +E D +YN
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + ++DA+++ ++M +KG++PNV TYN LI ++ A DEM ++
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GI + TY+ + + EV LL+ M ++G +P + TY +I+ F +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+++ + + + +Y I GK++EA+ EM +K L+P T E +++
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 425 SYNKQF 430
K +
Sbjct: 554 MMEKGY 559
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +H+ Y+ MI L + + A A++ +M GPS+VT +LL +C + +
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL---NGFCHGNRI 151
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
A+ + F L+ L ++ +A L+ C D+
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV----- 206
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++NG C G A + +M + I DVV +S +I K R++ L LF +
Sbjct: 207 TYGAVINGLCKR-GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M GI D Y+++I L DA L+ M E+ + PNVVT+NSLI K K
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDT 347
L EA + FDEM+QR I P I TY++ + D + +++F L+ S C P T
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD---CLPDVVT 382
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI F + ++ + +++ ++S G + +YT LIH F + A + +M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 408 EKQLLPEPKTDELLQD 423
+ P T L D
Sbjct: 443 SDGVHPNIMTYNTLLD 458
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 184/400 (46%), Gaps = 45/400 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T++ L + K A AL++ M P LVT +I C
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA---VINGLCKRG 219
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+N ++ K + + ++ +LC+Y++V DA +L NK + P + ++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTY 278
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ CN G +A R+ +M +R I +VV+F+ +I ++K L + +LFD+M
Sbjct: 279 SSLISCLCN-YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL- 294
+ I+ + YN++I+ + +A + M K P+VVTYN+LI CKA+K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 295 ----------------------------------DEARQAFDEMLQRGISPTIRTYHAFL 320
D A+ F +M+ G+ P I TY+ L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + + G E+ + E ++K +P TY ++ + + + + + ++ +S G
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y +I G EEA+ +++MKE LP+ T
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 172/374 (45%), Gaps = 14/374 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K R D A L EM P + T +L+ + Y D R ++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + F L+ A + + +AE L + + P N ++N ++NG+C +
Sbjct: 303 ERK---INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-NIVTYNSLINGFC-M 357
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA++++ M + DVV+++ +I+ + KA+ + + LF M R G+ +
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +IH + +A + K M GV PN++TYN+L+ LCK KL++A F+ +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ + P I TY+ + + + G E+ + L S+ G +P Y +I F +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----D 418
+ ++ ++ E+G PD +Y LI A +G + + EM+ + + T
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Query: 419 ELLQDWSYNKQFVE 432
++L D +K F+E
Sbjct: 598 DMLHDGRLDKGFLE 611
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 39/283 (13%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA ++ EM + +V FS ++S +K + V+ ++M+ +G+ + YN +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L + + A++++ M + G P++VT NSL+ C ++ EA D+M++ G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT-------------------- 347
P T+ + + E L+E M GCQP T
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 348 ---------------YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
Y +I ++R + ++ E+ G PD +Y++LI L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQ 434
G+ +A + +M E+++ P T + L+ ++ + +E +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 17/287 (5%)
Query: 137 GIED---FQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
GI D + LL+ LC Q+A H+M + P + S++ ++NG+ +
Sbjct: 47 GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------FK 100
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E + M + QR I +VV+++ II+ KA+ + K + + M + G+ D YN+++
Sbjct: 101 EGDLDKM-LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 311 PTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY L T E+ GLL+ M + G P + + +L+ +++ + V
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++++ + G P+ +Y +I L +G++E+A Y+ +M ++ L P+
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNL 224
DVF S+NI+LNG C+ S E + + G C DVVS+S +I+ + K +L
Sbjct: 50 DVF-----SYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K+L DQ I + YN++I AL K + V A+ ++ +M + GV P+ +TYNS+
Sbjct: 105 DKML---DQR----ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGC 341
+ C + + EA +M G+ P + TY++ +D + + G E + +SM K G
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY L++ ++ + + + + NG P+ ++ L+ A K+EEA
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 402 YYMEMKEKQLLPEPKT 417
+ +M+++ L P T
Sbjct: 278 VFSKMRQQGLNPNAVT 293
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+D+M P++VT ++ I C V +A+ + + ++
Sbjct: 104 LDKMLDQRISPNVVTYNSI---IAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 148 LCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
C + Q E ++F K DV +N+ + NG C EA +++ M
Sbjct: 161 FC--SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT------EARKIFDSM 212
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++RG+ D+ ++ ++ Y+ L ++ L D M R GI + V++ ++ A AK V
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A+ + M ++G+ PN VTY ++I LCK+ ++++A F++M+ G+ P Y++
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Query: 320 L 320
+
Sbjct: 333 I 333
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 18/285 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++IA L K + D A ++ M P +T ++ + +C+ AI
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI---VHGFCSSGQPKEAIVFLK 175
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+ LC+ +A + + + P + ++ +L G+
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP-DITTYGTLLQGYATK 234
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI + FS ++ Y+K + + + +F +M++ G+ +
Sbjct: 235 -GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI L K V+DA+ + M ++G+ P+ + YNSLI LC K ++A + F EML
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 306 QRGISPTIRTYHAFLD-------IIRTGEEVFGLLESMRKMGCQP 343
RGI + +++ +D +I +G+ L + M ++G +P
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGK----LFDLMVRIGVKP 394
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKP 287
+FD++ R GI D YN +++ L ++A+ L+ M + G P+VV+Y+++I
Sbjct: 39 VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
K LD+ ML + ISP + TY++ + + +T ++ +L +M K G P
Sbjct: 98 FFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY ++ F Q ++ +G PD +Y +L+ L NG+ EA + +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210
Query: 405 EMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
M ++ L P+ T LLQ ++ VE
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVE 239
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA V+ +M Q+G+ + V++ +I K+ + + F+QM G+ D VYN++I
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H+L + A L M ++G+ + + +NS+I CK ++ E+ + FD M++ G+
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVK 393
Query: 311 PTIRT 315
P I T
Sbjct: 394 PDIIT 398
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 173/359 (48%), Gaps = 9/359 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G+ + ++ ++ + F+ W+ +E + ++ + ILI+ C +
Sbjct: 123 NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS----KVVLDVYSFGILIKGCCEAGE 178
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+ ++ + F F+ + + L+ C+ ++ A+ L F K N +++ +
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG G ++ ++ +M + G+ ++ +++C+++ K ++FD+M+
Sbjct: 239 LINGLFKN-GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ C+ YN +I L + + +A ++ M+ G+ PN++TYN+LI C KL +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKK 354
++ RG+SP++ TY+ + R G+ +++ M + G +P+ TY +LI
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F+R ++ + E G PD +Y+ LIH + G++ EA + + M EK P
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 149/302 (49%), Gaps = 7/302 (2%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWC 183
+F+ + K + + F L+ C ++ + L+ + F N + +++G C
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +A+ ++ EM + G+ + +++ +I+ K + ++++M+ G+ +
Sbjct: 210 KK-GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN V++ L K KDA + M E+GV+ N+VTYN+LI LC+ KL+EA + D+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 304 MLQRGISPTIRTYHAFLD----IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M GI+P + TY+ +D + + G+ L ++ G P+ TY +L+ F R
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGK-ALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
K+ E+ E G P + +YT LI + +E+A Q + M+E L+P+ T
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 420 LL 421
+L
Sbjct: 448 VL 449
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 73 AILGKVR-KFDTAWALIDEMRGGETGPSLVTKQTLL-ILIRRYCAVHDVGRAINAFYAYK 130
I GK+ +F T+ +L+ + ET TK L ++I Y + +I+ F
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSK---TKFRLYEVIINSYVQSQSLNLSISYFNEMV 121
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
F G F LL+ + + NK + SF I++ G C G
Sbjct: 122 DNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEA-GEIE 180
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
++ + +E+++ G +VV ++ +I K + K LF +M ++G+ + + Y +I
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L K + K + + M+E GV PN+ TYN ++ LCK + +A Q FDEM +RG+S
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
I TY+ + + E +++ M+ G P TY LI F + G +
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
++ G P +Y L+ G A + EM+E+ + P T +L D
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 428 KQFVERQI 435
+E+ I
Sbjct: 421 SDNMEKAI 428
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 154/332 (46%), Gaps = 42/332 (12%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAIL 75
EM K++E G+ + + V++ + D F ++ ++ G + + Y+T+I L
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ K + A ++D+M+ P+L+T TL I +C V +G+A++ K
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTL---IDGFCGVGKLGKALSLCRDLKS---- 366
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+GL +L Y NI+++G+C G + A ++
Sbjct: 367 ------RGLSPSLVTY------------------------NILVSGFCRK-GDTSGAAKM 395
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM +RGI V+++ +I ++++ N+ K ++L M+ +G+ D Y+ +IH
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A L KSM EK PN V YN++I CK A + EM ++ ++P + +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 316 YHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
Y ++++ R +E L+E M G P+
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 10/278 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD-----VFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
LL LC Q+A L+ D P + S+ ++NG+ G S +A + E
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVINGFFKE-GDSDKAYSTYHE 221
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M R I DVV++S II+ K + + K + + M + G+ + YN+++H
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+ P I TY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 319 FLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L T E+ LL+ M + G P + + +LI +++ + V++++ ++G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ +Y A+I L +G +++A Y+ +M ++ L P
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 155/357 (43%), Gaps = 19/357 (5%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTK--QTLLILIRRYCAVHDVGRAINAFYAYKRF 132
L V + A A+ R G VT T ILI C + A +
Sbjct: 57 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK 116
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNI 185
F V F LL LC K DA ++ C DVF S I+L G C+
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF-----SCTILLKGLCDE 171
Query: 186 IGSSREAERVWMEMSQRG--ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S E + M RG DVVS++ +I+ + K + K + +M I D
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDV 231
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+++I AL KG+ + A+ ++ +M + GV PN +TYNS++ C + + EA +
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 304 MLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M G+ P + TY++ +D + + G E + +SM K G +P TY L++ ++
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + + + NG PD + LI A K++EA + +M++ L P T
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 170/400 (42%), Gaps = 78/400 (19%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+ I + D +A + ++ + + + + +++ALC+
Sbjct: 188 RGGGSAPDVVSYTTV---INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P N ++N IL+G+C +++
Sbjct: 245 QAMDKAMEVLTTMVKNGVMP-NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G S EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI D V+N +I A AK V +A+ + M + G+ PNVVTY ++I LCK+ +D
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 296 EARQAFDEMLQRGISPTIRTYHAF-----------------LDIIRTG---EEVF----- 330
+A F++M+ G++P I Y + L+++ G +F
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 331 -------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L + M ++G +P TY LI + + K+ + + G
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y LI+ ++++A + EM + P T
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 150/332 (45%), Gaps = 11/332 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V A+ F ++ + + ++ LC+ +V DA E ++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI-- 433
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N + +++ C I +AE + +EM RGIC + + F+ II + K
Sbjct: 434 DEGLTP-NIIVYTSLIHSLC-IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ + Y+ +I + +A L+ SM G+ P+ VTYN+
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
LI C+ ++D+A F EM+ G+SP I TY+ L + R L + K G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
Q TY +++ + +++ + + ++ +I AL G+ +EA
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
++ L+P T L+ + + +E
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 143/349 (40%), Gaps = 23/349 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLI--LIRRYCAVHDVGRAI 123
Y ++I L K+D A LI EM RG + T+ +I +C V +
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRG-------ICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIIL 179
F R + + L+ C + +A L+ +F K ++N ++
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL---SSMFSVGMKPDCVTYNTLI 553
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG+C + +A ++ EM G+ ++++++ I+ R L+ + + G
Sbjct: 554 NGYCRV-SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ + YN ++H L K L +A+ + +++ + T+N +I L K + DEA+
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F G+ P TY +II G EE+ L SM GC + ++++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELL 732
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+ + + I E + S+ + I L GK +E H++ E
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFLPE 780
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 91/224 (40%), Gaps = 7/224 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V ++ +I C +A L + + G + + ++ L + DA+ + +
Sbjct: 87 VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD-I 322
+ M E P+V + L+K LC + EA + M G +P + +Y ++
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ + + M P TY +I + + +V + +NG P+
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNC 266
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H + + +EA + +M+ + P+ T L D+
Sbjct: 267 MTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 185/381 (48%), Gaps = 19/381 (4%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTK 103
E A+ F + Q G Y ++I LGK + D A+ L ++M G P + T
Sbjct: 174 EEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLM 161
LIR + +H GR + +K D L + + C +K + + ++
Sbjct: 233 -----LIRNF-FIH--GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 284
Query: 162 FCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F + + F + +S++I+++G G +RE ++ M Q+G D +++ ++ +
Sbjct: 285 FEDIRSYGFLPDVRSYSILIHGLTKA-GQARETSNIFHAMKQQGFALDARAYNAVVDGFC 343
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K+ +HK + ++MK ++ Y A++ LAK + +A L + + KG+ NVV
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESM 336
Y+SLI K ++DEA +EM+++G++P + T+++ LD + EE+ L +SM
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
++M C P TY +LI R +++ F W ++ + G P+ +YT +I L G +
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 523
Query: 397 EEAHQYYMEMKEKQLLPEPKT 417
+A+ + K +P+ +
Sbjct: 524 TDAYSLFERFKANGGIPDAAS 544
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 145/287 (50%), Gaps = 10/287 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC+ + +AE L M + V P ++N ++ G+ + G +A ++
Sbjct: 21 YTSMIWVLCKAGRLGEAEELFAQMEAERSV-PC-AYAYNTMIMGYGSA-GRFEDAYKLLE 77
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+ +RG VVSF+ I++C K R + + L LF+ MK+ E + YN +I L G
Sbjct: 78 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGG 136
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V++A ++ ME + PN++T N ++ LCKARKL+EA + F+ QRG +P TY
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ +D + + G +E + L E M G Y LI+ F + + K++ E+
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G PD + + +F G++E+ + +++ LP+ ++ +L
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 15/368 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G Y +MI +L K + A L +M + P T+++
Sbjct: 10 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM------GY 63
Query: 117 HDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT 172
GR +A+ +R + + F +L+ L + + V +A L KD P N+
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NS 122
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++NII++ C + G EA R+ EM + ++++ + ++ KAR L + ++F+
Sbjct: 123 STYNIIIDMLC-LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ G D Y ++I L K V +A L + M + G N V Y SLI+
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYI 349
+ ++ + F E+++RG P + + ++D + + GE G + E +R G P +Y
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI ++ Q +++ + + G D +Y A++ +GK+ +A++ EMKEK
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361
Query: 410 QLLPEPKT 417
+ P T
Sbjct: 362 CVQPTVAT 369
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 14/221 (6%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-----YNA 248
+ + E+ +G+ D VS++ +I KA L + LF QM E +R V YN
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-----EAERSVPCAYAYNT 58
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I +DA L++ + E+G P+VV++NS++ L K RK+DEA F E++++
Sbjct: 59 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 117
Query: 309 ISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P TY+ +D++ G EE + +L+ M P T +++ + + R+ +
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
K++ S+ G PD +Y +LI L G+++EA++ + +M
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 178/409 (43%), Gaps = 51/409 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G +F+ A+ L++ +R PS+V+ ++L + + V A++ F
Sbjct: 56 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK---RKVDEALSLFE 112
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K+ + ++ LC V++A ++ + +FP N + NI+++ C
Sbjct: 113 VMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKA 170
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +++ SQRG D V++ +I K + + RLF++M G + V
Sbjct: 171 -RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 229
Query: 246 YNAVI------------HALAKG---RLVKDAISLMKS--------------------ME 270
Y ++I H + K R K ++L+ + +
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 289
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-- 327
G P+V +Y+ LI L KA + E F M Q+G + R Y+A +D ++G+
Sbjct: 290 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + +LE M++ QPT TY ++ ++ + + ++ E G + Y++LI
Sbjct: 350 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 409
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNKQFV 431
G+++EA+ EM +K L P T D L++ N+ V
Sbjct: 410 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 458
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 125/296 (42%), Gaps = 51/296 (17%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A KQ G+A R Y+ ++ K K A+ +++EM+ P++ T Y
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT----------YG 371
Query: 115 AVHD----VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
A+ D + R A+ ++ K + GIE
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAK-SKGIE------------------------------L 400
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ +++G+ + G EA + EM ++G+ +V +++ ++ KA +++ L
Sbjct: 401 NVVLYSSLIDGFGKV-GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 459
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F MK M + Y+ +I+ L + + A + M+++G+ PNVVTY ++I L K
Sbjct: 460 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 519
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF-----GLLESMRKMGC 341
+ +A F+ G P +++A ++ + G L++ ++ C
Sbjct: 520 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWLDTTMRLDC 575
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ +++ +LS + + A ++A ++ ++ + Y+ M+ + + +F L+D
Sbjct: 219 NARMLATILSVLGKANQEALAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLD 278
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R I + L+SA
Sbjct: 279 LMRSRGCEPDLVSFNTL-INARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS 337
Query: 150 RYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + C D++ +N I + G C G SREA R++ ++ +G
Sbjct: 338 RESNLEEAVKVYNDMVAHRCQPDLWTYNAM---ISVYGRC---GMSREAGRLFKDLESKG 391
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+++ ++ +++ N+ KV + + M +MG D YN +IH K A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L M+ G +P+ VTY LI L KA + EA + EML + PT+RT+ A +
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGY 511
Query: 323 IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ V + M + G +P + Y +++ R+ + G K++ E+ + PD
Sbjct: 512 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 571
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ Y ++ L + E+ H+ +M+E
Sbjct: 572 ALYEVMLRVLGKENREEDVHKVVKDMEE 599
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 163/391 (41%), Gaps = 59/391 (15%)
Query: 37 VLSWV-RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
V+ WV ++ W+ A + W + Y+ + R T++++LGK + A
Sbjct: 191 VVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALA----------- 239
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
+ I R A + + NA G+ + R+ VQ
Sbjct: 240 ----------VEIFARAEAAXGNTVQVYNAM---------------MGVYARTGRFTKVQ 274
Query: 156 DAEHLM---FCNKDVFPFNT------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+ LM C D+ FNT KS ++ N ++ E+ + GI
Sbjct: 275 ELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN----------EVRRSGIQP 324
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D+++++ +IS S+ NL + +++++ M + D YNA+I + + ++A L
Sbjct: 325 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 384
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RT 325
K +E KG P+ VTYNSL+ + +D+ ++ ++M++ G TY+ + + +
Sbjct: 385 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 444
Query: 326 GEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ F L M+ G P TY +LI + +V +E+ P ++
Sbjct: 445 GQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTF 504
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ALI GK EA + + M + P+
Sbjct: 505 SALICGYAKAGKRVEAEETFDCMLRSGIKPD 535
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISLMKS 268
++ ++ Y++ KV L D M+ G E D +N +I+A L G +V + AI L+
Sbjct: 257 YNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNE 316
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG- 326
+ G+ P+++TYN+LI + L+EA + +++M+ P + TY+A + + R G
Sbjct: 317 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 376
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E L + + G P TY L+ F+R V ++ ++ + G G D +Y
Sbjct: 377 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 436
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+IH G+ + A Q Y +MK P+ T +L D
Sbjct: 437 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLID 474
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 44/473 (9%)
Query: 26 GIKVSSELV-SEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT-MIAILGKVRKFDT 83
G++ S L S V+++ + + + + ++ G HT +I GK++ +
Sbjct: 738 GVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 797
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A +L+ +R T +V ++ LI Y A RA F R + ++ G
Sbjct: 798 AESLVGSLRQKCT---MVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNG 854
Query: 144 LLSALC-------RYKNVQDAEHLMF--------CNKDVFPFNTKSFNI----------- 177
L+ AL Y +Q+ + + F D F F +
Sbjct: 855 LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 914
Query: 178 ---------ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
I+ G R+ E + EM D+ ++ ++ Y+ + K
Sbjct: 915 YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTG 974
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+++ ++ G++ D YN +I + R ++ +SLM M G+ P + TY SLI
Sbjct: 975 QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1034
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTN 345
K + +++A + F+ +L + YH + + R + LL M++ G +PT
Sbjct: 1035 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1094
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
T +L+ +S Q KV + + G Y+++I A NG A Q ME
Sbjct: 1095 ATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLME 1154
Query: 406 MKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS-GQNTRVISKKSD 457
MK+ L P+ + + Q I LKA + R++++KSD
Sbjct: 1155 MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLLTEKSD 1207
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 14/342 (4%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG-IEDFQ 142
A L+D +R +G + + L+I++ C H +G A+ + + F G ++
Sbjct: 656 ARELLDFLREHSSGSHQLINEALIIML---CKAHQLGDALREYGKARDFGLFCGSFTMYE 712
Query: 143 GLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKS--FNIILNGWCNIIGSSREAERVWMEM 199
LL LC +N AE +F + + + ++ +C + G A + +
Sbjct: 713 SLL--LCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKM-GFPETAHYLIDQA 769
Query: 200 SQRGICYDVVSF-SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
++G+ +D VS + +I Y K + K L +++ DRKV+NA+IHA A
Sbjct: 770 EEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGC 829
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A ++ +M G +P V + N L++ L +LDE E+ G + +
Sbjct: 830 YERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITL 889
Query: 319 FLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
LD +F + + M+ G PT Y ++I ++ ++ +V + +E+
Sbjct: 890 MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAX 949
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD S + +++ G ++ Q Y ++E L P+ T
Sbjct: 950 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDT 991
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEV 329
E V YN+++ + + + ++ D M RG P + +++ ++ +++G V
Sbjct: 247 EAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMV 306
Query: 330 ----FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL +R+ G QP TY LI SR KV+N++ + PD +Y A
Sbjct: 307 TNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNA 366
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I G EA + + +++ K LP+ T
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVT 398
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 91/232 (39%), Gaps = 42/232 (18%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y+T+I + GK + D A+ L +M+ P VT
Sbjct: 426 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVT----------------- 468
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ L+ +L + +++A +M N V P ++F+
Sbjct: 469 ---------------------YTVLIDSLGKANMIKEAAEVMSEMLNAXVKP-TLRTFSA 506
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G+ G EAE + M + GI D +++S ++ + K ++L+ +M
Sbjct: 507 LICGYAKA-GKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLH 565
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ D +Y ++ L K +D ++K MEE + V + L+K C
Sbjct: 566 SFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGEC 617
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 185/381 (48%), Gaps = 19/381 (4%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTK 103
E A+ F + Q G Y ++I LGK + D A+ L ++M G P + T
Sbjct: 306 EEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLM 161
LIR + +H GR + +K D L + + C +K + + ++
Sbjct: 365 -----LIRNF-FIH--GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416
Query: 162 FCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F + + F + +S++I+++G G +RE ++ M Q+G D +++ ++ +
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKA-GQARETSNIFHAMKQQGFALDARAYNAVVDGFC 475
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K+ +HK + ++MK ++ Y A++ LAK + +A L + + KG+ NVV
Sbjct: 476 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESM 336
Y+SLI K ++DEA +EM+++G++P + T+++ LD + EE+ L +SM
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
++M C P TY +LI R +++ F W ++ + G P+ +YT +I L G +
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 655
Query: 397 EEAHQYYMEMKEKQLLPEPKT 417
+A+ + K +P+ +
Sbjct: 656 TDAYSLFERFKANGGIPDAAS 676
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 13/371 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + T++ L + + A AL+DE++G P +V + I +
Sbjct: 72 QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN---VCIDCFGKA 128
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
+V A F+ K + ++ LC+ + +AE L M + V P
Sbjct: 129 GNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PC-AY 186
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N ++ G+ + G +A ++ + +RG VVSF+ I++C K R + + L LF+
Sbjct: 187 AYNTMIMGYGSA-GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 245
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ E + YN +I L G V++A ++ ME + PN++T N ++ LCKARK
Sbjct: 246 MKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
L+EA + F+ QRG +P TY + +D + + G +E + L E M G Y
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI+ F + + KV+ E+ G PD + + +F G++E+ + +++
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424
Query: 411 LLPEPKTDELL 421
LP+ ++ +L
Sbjct: 425 FLPDVRSYSIL 435
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 164/359 (45%), Gaps = 25/359 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY + + A L + R+ D A + MR + P+ +LI
Sbjct: 5 GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAF---SAYTVLIGALAEARRP 61
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
RA+ + + VG+ F L+ AL R V DA L+ D + +I+L
Sbjct: 62 ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV----DEVKGSCLEPDIVL 117
Query: 180 NGWC----NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
C G+ A + + E+ +G+ D VS++ +I KA L + LF QM
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM- 176
Query: 236 RMGIECDRKV-----YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
E +R V YN +I +DA L++ + E+G P+VV++NS++ L K
Sbjct: 177 ----EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDT 347
RK+DEA F E++++ P TY+ +D++ G EE + +L+ M P T
Sbjct: 233 KRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+++ + + R+ +K++ S+ G PD +Y +LI L G+++EA++ + +M
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 350
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 15/368 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G Y +MI +L K + A L +M + P T+++
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM------GY 195
Query: 117 HDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT 172
GR +A+ +R + + F +L+ L + + V +A L KD P N+
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NS 254
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++NII++ C + G EA R+ EM + ++++ + ++ KAR L + ++F+
Sbjct: 255 STYNIIIDMLC-LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ G D Y ++I L K V +A L + M + G N V Y SLI+
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYI 349
+ ++ + F E+++RG P + + ++D + + GE G + E +R G P +Y
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI ++ Q +++ + + G D +Y A++ +GK+ +A++ EMKEK
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493
Query: 410 QLLPEPKT 417
+ P T
Sbjct: 494 CVQPTVAT 501
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 175 FNIILNGWCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
F + + +IG+ EA R + +M + G V F+ ++ ++ + L
Sbjct: 41 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 100
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D++K +E D +YN I K V A ++ +G+ P+ V+Y S+I L
Sbjct: 101 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVL 160
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMRKMGCQP 343
CKA +L EA + F +M P Y+ I+ G E+ + LLE +R+ GC P
Sbjct: 161 CKAGRLGEAEELFAQMEAERSVPCAYAYNTM--IMGYGSAGRFEDAYKLLERLRERGCIP 218
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ ++ ++ + R+ ++ E+ + P+ S+Y +I L L G++EEA++
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM+ L P T ++ D
Sbjct: 278 DEMEHASLFPNLLTVNIMVD 297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 178/409 (43%), Gaps = 51/409 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G +F+ A+ L++ +R PS+V+ ++L + + V A++ F
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK---RKVDEALSLFE 244
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K+ + ++ LC V++A ++ + +FP N + NI+++ C
Sbjct: 245 VMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKA 302
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +++ SQRG D V++ +I K + + RLF++M G + V
Sbjct: 303 -RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361
Query: 246 YNAVI------------HALAKG---RLVKDAISLMKS--------------------ME 270
Y ++I H + K R K ++L+ + +
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-- 327
G P+V +Y+ LI L KA + E F M Q+G + R Y+A +D ++G+
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + +LE M++ QPT TY ++ ++ + + ++ E G + Y++LI
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNKQFV 431
G+++EA+ EM +K L P T D L++ N+ V
Sbjct: 542 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 590
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 46/271 (16%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A KQ G+A R Y+ ++ K K A+ +++EM+ P++ T Y
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT----------YG 503
Query: 115 AVHD----VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
A+ D + R A+ ++ K + GIE
Sbjct: 504 AIVDGLAKIDRLDEAYMLFEEAK-SKGIE------------------------------L 532
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ +++G+ +G EA + EM ++G+ +V +++ ++ KA +++ L
Sbjct: 533 NVVLYSSLIDGF-GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 591
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F MK M + Y+ +I+ L + + A + M+++G+ PNVVTY ++I L K
Sbjct: 592 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ +A F+ G P +++A ++
Sbjct: 652 VGNITDAYSLFERFKANGGIPDAASFNALIE 682
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 179/370 (48%), Gaps = 8/370 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+SG S ++ ++ L ++A + + M G+ GP +V+ T+ I+ YC
Sbjct: 217 KESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM---IKGYCKA 273
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSF 175
+ +A+ F ++ + L+ A N HL + ++
Sbjct: 274 GNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAY 333
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++++ G C G + E V+ M+++G +V ++ +I Y K N+++ + LF++MK
Sbjct: 334 SLVIGGLCKD-GRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMK 392
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G E D Y +++ L K + +A+ + ++ VA N + Y+SLI L KA ++D
Sbjct: 393 GEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA + F+EM++RG Y+A +D + ++G EE L + M K GC T TY +LI
Sbjct: 453 EAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILI 512
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + K+W+ + + G P +S+ AL L L+GK+ A + E+ ++
Sbjct: 513 SGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVI 572
Query: 413 PEPKTDELLQ 422
PE ++++
Sbjct: 573 PETAFEDMIN 582
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 184 NIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+++ S + +RV + E ++G V + + +I + + ++L ++ +MK GIE
Sbjct: 163 DVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIE 222
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+N +++ L ++ A + + ME + P+VV+YN++IK CKA +A +
Sbjct: 223 PSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEK 282
Query: 301 FDEMLQRGISPTIRTY--------------------------------HAFLDII----R 324
F +M +R + P TY HA+ +I +
Sbjct: 283 FTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCK 342
Query: 325 TGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G V G + E+M K GC+ Y LI + + ++ + G PD +
Sbjct: 343 DGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVT 402
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQL 411
Y +++ L +G+L+EA +Y+ K+ ++
Sbjct: 403 YGVIVNGLCKSGRLDEAVEYFEFCKDNEV 431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 40/253 (15%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDV 167
LI Y +V AIN F K F + +++ LC+ + +A E+ FC +
Sbjct: 371 LIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE 430
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ +++G G EAE+ + EM +RG D ++ +I +K+ + +
Sbjct: 431 VAVNAMFYSSLIDGLGKA-GRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEA 489
Query: 228 LRLFDQMKRMGIECDRKVYN--AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL- 284
L LF +M++ G CD+ VY +I L K ++A+ L M +KG+ P ++ +L
Sbjct: 490 LVLFKRMEKEG--CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALS 547
Query: 285 ---------------------------------IKPLCKARKLDEARQAFDEMLQRGISP 311
I LCKA + ++A + D ++ RG
Sbjct: 548 VGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREV 607
Query: 312 TIRTYHAFLDIIR 324
R ++ +R
Sbjct: 608 PGRVRTILINALR 620
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
W Q+ + + + +I S + + +V +F + K G N++I +
Sbjct: 143 WWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGA 202
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+V++ + + + M+E G+ P++ T+N L+ L + ++ A + F+ M I P + +
Sbjct: 203 LGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVS 262
Query: 316 YHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ + + G ++ M K +P TY+ LI+ F + ++ E+
Sbjct: 263 YNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME 322
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
E G +Y+ +I L +G+ E + M +K
Sbjct: 323 ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKK 359
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 17/287 (5%)
Query: 137 GIED---FQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
GI D + LL+ LC Q+A H+M + P + S++ ++NG+ +
Sbjct: 47 GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------FK 100
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E + M + QR I +VV+++ II+ KA+ + K + + M + G+ D YN+++
Sbjct: 101 EGDLDKM-LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 311 PTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY L T E+ GLL+ M + G P + + +L+ +++ + V
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++++ + G P+ +Y +I L +G++E+A Y+ +M ++ L P+
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNL 224
DVF S+NI+LNG C+ S E + + G C DVVS+S +I+ + K +L
Sbjct: 50 DVF-----SYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K+L DQ I + YN++I AL K + V A+ ++ +M + GV P+ +TYNS+
Sbjct: 105 DKML---DQR----ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGC 341
+ C + + EA +M G+ P + TY++ +D + + G E + +SM K G
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY L++ ++ + + + + NG P+ ++ L+ A K+EEA
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277
Query: 402 YYMEMKEKQLLPEPKT 417
+ +M+++ L P T
Sbjct: 278 VFSKMRQQGLNPNAVT 293
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 157/350 (44%), Gaps = 28/350 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++IA L K + D A ++ M P +T ++ + +C+ AI
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI---VHGFCSSGQPKEAIVFLK 175
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+ LC+ +A + + + P + ++ +L G+
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP-DITTYGTLLQGYATK 234
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI + FS ++ Y+K + + + +F +M++ G+ +
Sbjct: 235 -GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI L K V+DA+ + M ++G+ P+ + YNSLI LC K ++A + F EML
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 306 QRGISPTIRTYHAFLD-------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
RGI + +++ +D +I +G+ L + M ++G +P I R
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGK----LFDLMVRIGVKPD-------IITLGRN 402
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ ++F + S NG P+ +Y + + G LEE Q ++ M++
Sbjct: 403 DEAKDLFVAF---SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 449
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKP 287
+FD++ R GI D YN +++ L ++A+ L+ M + G P+VV+Y+++I
Sbjct: 39 VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
K LD+ ML + ISP + TY++ + + +T ++ +L +M K G P
Sbjct: 98 FFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY ++ F Q ++ +G PD +Y +L+ L NG+ EA + +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210
Query: 405 EMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
M ++ L P+ T LLQ ++ VE
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVE 239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
IL+ Y V A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI-- 318
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P ++ +N +++ C I +AE +++EM RGIC + F+ II + K
Sbjct: 319 DEGLRP-DSIVYNSLIHSLC-IFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ D I L + KD L + G+ PN TY
Sbjct: 377 VIESGKLFDLMVRIGVKPD-------IITLGRNDEAKD---LFVAFSSNGLVPNYWTYRL 426
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + + L+E Q F M G +
Sbjct: 427 MAENIIGQGLLEELDQLFLSMEDNGCT 453
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 194/459 (42%), Gaps = 82/459 (17%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRK------------- 80
VS++L +R D + A FF WAG Q G+ H+T Y ++ ++ + R
Sbjct: 73 VSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIM 132
Query: 81 -------------FDTAWA-----------------------LIDE-------MRGGETG 97
FD W+ L++E MR T
Sbjct: 133 NSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTL 192
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG------IEDFQGLLSALCRY 151
P + LL H + ++ N K F +G + + ++ LC+
Sbjct: 193 PKARSCNFLL---------HRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKE 243
Query: 152 KNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+++++ L +++ + ++N +++G+ + GS E ++ EM G D+++
Sbjct: 244 GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV-GSLEEVASLFNEMKDVGCVPDIIT 302
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +I+CY K + + F +MK G++ + Y+ +I A K +++ AI L+ M
Sbjct: 303 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR 362
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--- 326
G+ PN TY SLI CKA L EA + ++MLQ G+ I TY A LD + + G
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EEVF SM K G P Y L+ + + + + K+ +++E PD Y
Sbjct: 423 EAEEVF---RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 479
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++I KLEE EMK + + P + D
Sbjct: 480 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 12/364 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I GKV + +L +EM+ P ++T L I YC
Sbjct: 257 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL---INCYCKF 313
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKS 174
+ RA F K + + L+ A C+ +Q A L+ + + P N +
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLP-NEFT 372
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++ C G+ EA ++ +M Q G+ ++V+++ ++ KA + + +F M
Sbjct: 373 YTSLIDANCK-AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ GI +++VY A++H K ++DA+ ++K M E + P+++ Y S+I C RKL
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491
Query: 295 DEARQAFDEMLQRGIS--PTIRT--YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+E + +EM RGIS P I T A+ ++ + + M+ +G + T TY +
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKS-SDALNFFQEMQDVGVEATIVTYCV 550
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + G P+ + YT+LI L N +E A + + EM+ +
Sbjct: 551 LIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG 610
Query: 411 LLPE 414
+ P+
Sbjct: 611 MTPD 614
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 159/359 (44%), Gaps = 16/359 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G + Y ++I K AW L+++M ++VT LL +
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD------GL 415
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLMFCNKDVFPFNTKSF 175
GR I A + R GI Q + +AL Y + E M K + N K
Sbjct: 416 CKAGRMIEAEEVF-RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP- 473
Query: 176 NIILNG---WCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++IL G W + E ++ +E M RGI + V + II Y KA L F
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 533
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M+ +G+E Y +I L + +V+ A+ M G+ PNV Y SLI LC
Sbjct: 534 QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXN 593
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
++ A++ FDEM RG++P I + A +D ++ G +E L+ M ++ + Y
Sbjct: 594 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
L+ FS+ + K +NE+ E G P+ L+ + G+L+EA + EM+
Sbjct: 654 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 712
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 173/391 (44%), Gaps = 44/391 (11%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A +FF WAG+Q+G+ H Y+ ++ +L + + +A+ +EM P+ +
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFN--- 158
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC------------------ 149
ILIR + A+ F KR + + F L+ LC
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 150 ------------------RYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ K V++A + K FP + ++N +++G G ++
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK-AGHAQ 277
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA +V M + V++ +++ KA L + LF M G + +Y ++I
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H AK +K+A SL M E G P+V+T+ +I LCK+ ++A ++F+EM++ G
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397
Query: 311 PTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY L I F +++ M GC P + TYI L+ F + + ++
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+E+ + + P+ Y++L++ L G +E+
Sbjct: 458 LDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 163/384 (42%), Gaps = 49/384 (12%)
Query: 60 GYAHSTREYHT-MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G+ R HT M+ L K ++ A + +M P + T++ + + +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLL-SALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
+ ++ A K V E G+L ++LC+ ++ AE L F N+ +
Sbjct: 279 ALKVLDNMLA----KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G+ G +EA ++ EM + G DV++ + +I K+ N + + F++M R
Sbjct: 335 SLIHGFAKS-GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + + Y +I L+K V +A +MK M G P+ VTY L+ CK +LDE
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD----------------------------------- 321
A Q DE+ + SP ++ Y + ++
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513
Query: 322 --IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ--FGNVFKVWNEISENG 375
+ +TG +E + + M GC+P TY +LI R R+ F + +++ + G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573
Query: 376 NGPDRSSYTALIHALFLNGKLEEA 399
PD +YT L L G+++ A
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRA 597
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 24/355 (6%)
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K+ + D A L+DE+ + P+L Q L+ C V + ++ + ++ K A
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNL---QLYSSLVNGLCDGGSVEKTLDDLF--EQSKAAA 501
Query: 137 GIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
D ++ LC+ + +A + ++ P + ++NI++NG C SRE
Sbjct: 502 ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP-DATTYNILINGLCR----SRE 556
Query: 192 --AERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
ER + ++ + G D V+++ + K + + +++ ++ G D Y
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
A+ L V A+SL + M +G AP+ Y +I L K +KL++A + FDEM+
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG 676
Query: 307 RGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFG 362
+G PT+ TY A + + G +E F ESM G + Y LI F + +
Sbjct: 677 KGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVD 736
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K++ ++ GN P + +L L +GK E+A + EM P T
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 4/230 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + GI + SF+ +I +++ R + F+ MKR + D + ++ L K
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203
Query: 258 LVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ + A + M G V P+ + ++++ L KA+++ EAR+ F +M + G P Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263
Query: 317 HAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ +D + + G +E +L++M C PT TY +L+ + +++ ++
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+G P+ YT+LIH +G+++EA + EM E P+ T ++ D
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 147/369 (39%), Gaps = 50/369 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY + MI L K F+ A +EM G P++VT T++ + + V
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFN 176
+ R + A+ F +V + LL C+ + +A L+ +K N + ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSV---TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474
Query: 177 IILNGWCN------IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++NG C+ + E + E G+C ++ C K L + R+
Sbjct: 475 SLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC------KTGRLDEACRI 528
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGR--LVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
F +M G + D YN +I+ L + R V+ A +L+ +E+ G P+ VTY L L
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL 588
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
CK ++D A + +E RG + + Y A
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTA------------------------------ 618
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L Q ++ E+ G PD ++Y +I+ L KLE+A +++ EM
Sbjct: 619 --LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG 676
Query: 409 KQLLPEPKT 417
K P T
Sbjct: 677 KGQKPTVAT 685
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 155/402 (38%), Gaps = 50/402 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G+ Y+TMI L K A ++D M P+ VT IL+ C
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG---ILVNSLCKA 308
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--------------- 161
+ RA F F + L+ + +++A L
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368
Query: 162 ------FCNKDVFPFNTKSFNIILNGWC--NI------------IGSSREAERVWMEMSQ 201
C F KSF ++ G C N+ IG A R+ M
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG----R 257
G D V++ C++ + K L + +L D++ + + ++Y+++++ L G +
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ D K+ E + P + S+I LCK +LDEA + F M+ G P TY+
Sbjct: 489 TLDDLFEQSKAAAET-LDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 318 AFLD-IIRTGEE----VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
++ + R+ E F LL + K+G P TY L + + K+ E S
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G D +YTAL L G+++ A + EM + P+
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 10/255 (3%)
Query: 144 LLSALCRYKN--VQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L++ LCR + V+ A L+ K + + ++ + G C I G A ++ E S
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI-GEVDRAVKMLEEAS 605
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RG DVV+++ + + + + + LF +M R G D Y +I+ L K + ++
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLE 665
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTY--- 316
DA M KG P V TY +L++ LC A +DEA F+ ML RG + ++ Y
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDAL 725
Query: 317 -HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
H F ++ + L E M G PT T L R + ++ E++ G
Sbjct: 726 IHGFCKALKV-DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Query: 376 NGPDRSSYTALIHAL 390
+ P +++TA++ L
Sbjct: 785 SPPHAATFTAILDGL 799
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 68 YHTMIAILGKVR--KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+ +I L + R + + A+AL+ ++ P VT L I + C + +V RA+
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL---CKIGEVDRAVKM 600
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ + + L + LC V A L + P + ++ I+NG
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP-DAAAYCCIINGLI 659
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECD 242
+ +A + + EM +G V +++ ++ A N+ + F+ M G +
Sbjct: 660 KV-KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+Y+A+IH K V A+ L + M +G P VT SL L ++ K ++A++
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
EM G P T+ A LD +R +E LL+
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 94/203 (46%), Gaps = 4/203 (1%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ G + D YN +++ L + ++ + M + G+APN ++N LI+ + R+
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT-YIM 350
D+A F+ M ++ P + T+ +D + + G E+ F + M MG P + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+++ + ++ +V+ ++ + G PD +Y +I L G +EA + M K
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 411 LLPEPKTDELLQDWSYNKQFVER 433
+P T +L + +ER
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLER 313
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 10/278 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD-----VFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
LL LC Q+A L+ D P + S+ ++NG+ G S +A + E
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAP-DVVSYTTVINGFFKE-GDSDKAYSTYHE 221
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M R I DVV++S II+ K + + K + + M + G+ + YN+++H
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+ P I TY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 319 FLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L T E+ LL+ M + G P + + +LI +++ + V++++ ++G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ +Y A+I L +G +++A Y+ +M ++ L P
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 155/357 (43%), Gaps = 19/357 (5%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTK--QTLLILIRRYCAVHDVGRAINAFYAYKRF 132
L V + A A+ R G VT T ILI C + A +
Sbjct: 57 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKK 116
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNI 185
F V F LL LC K DA ++ C DVF S I+L G C+
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF-----SCTILLKGLCDE 171
Query: 186 IGSSREAERVWMEMSQRG--ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S E + M RG DVVS++ +I+ + K + K + +M I D
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDV 231
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+++I AL KG+ + A+ ++ +M + GV PN +TYNS++ C + + EA +
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 304 MLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M G+ P + TY++ +D + + G E + +SM K G +P TY L++ ++
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + + + NG PD + LI A K++EA + +M++ L P T
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 149/323 (46%), Gaps = 11/323 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
ILI Y V A+ F ++ + + ++ LC+ +V DA E ++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI-- 433
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P N + +++ C I +AE + +EM RGIC + + F+ II + K
Sbjct: 434 DEGLTP-NIIVYTSLIHSLC-IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +LFD M R+G++ + Y+ +I + +A L+ SM G+ P+ VTYN+
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
LI C+ ++D+A F EM+ G+SP I TY+ L + R L + K G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
Q TY +++ + +++ + + ++ +I AL G+ +EA
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ + L+P+ +T L+ +
Sbjct: 672 DLFAALSANGLVPDVRTYSLMAE 694
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 170/399 (42%), Gaps = 84/399 (21%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+ I + D +A + ++ + + + + +++ALC+
Sbjct: 188 RGGGSAPDVVSYTTV---INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P N ++N IL+G+C +++
Sbjct: 245 QAMDKAMEVLTTMVKNGVMP-NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G S EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI D V+N +I A AK V +A+ + M + G+ PNVVTY ++I LCK+ +D
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 296 EARQAFDEMLQRGISPTIRTYHAF-----------------LDIIRTG------------ 326
+A F++M+ G++P I Y + L+++ G
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 327 ------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
E++F L M ++G +P TY LI + + K+ + +
Sbjct: 484 HSHCKEGRVIESEKLFDL---MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +Y LI+ ++++A + EM + P
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 22/242 (9%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKN 153
P+++T TL I YC + A + F+VG++ + L++ CR
Sbjct: 509 PNVITYSTL---IDGYCLAGKMDEATKLLSSM----FSVGMKPDCVTYNTLINGYCRVSR 561
Query: 154 VQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+ DA L + V P N ++NIIL G + ++ A+ +++ +++ G ++ ++
Sbjct: 562 MDDALALFKEMVSSGVSP-NIITYNIILQGLFHTRRTA-AAKELYVGITKSGTQLELSTY 619
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ I+ K + LR+F + ++ + + +N +I AL K +A L ++
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIR 324
G+ P+V TY+ + + L + L+E F M + G + R ++ + DI R
Sbjct: 680 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 739
Query: 325 TG 326
G
Sbjct: 740 AG 741
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 91/224 (40%), Gaps = 7/224 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V ++ +I C +A L + + G + + ++ L + DA+ + +
Sbjct: 87 VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD-I 322
+ M E P+V + L+K LC + EA + M G +P + +Y ++
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ + + M P TY +I + + +V + +NG P+
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNC 266
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H + + +EA + +M+ + P+ T L D+
Sbjct: 267 MTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
TL I+I +C A + + + F L++ LC V +A L+
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
P N ++N I+NG C G + A + +M +R + DV ++S II +
Sbjct: 162 VENGCQP-NVVTYNSIVNGICKS-GDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + LF +M+ GI+ YN+++ L K D + L+K M + + PNV+T+N
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKM 339
LI K KL EA + + EM+ +GISP TY++ +D + E +L+ M +
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
C P T+ LIK + + ++ K++ +IS+ G + +Y+ L+ +GKLE A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+ + EM +LP+ T +L D + +E+ +
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 154/345 (44%), Gaps = 10/345 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L + D A +L EM SLVT +L + C +
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSL---VGGLCKAGKWNDGVQLLK 264
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + F L+ + +Q+A L K + P NT ++N +++G+C +
Sbjct: 265 DMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP-NTITYNSLMDGYC-M 322
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA + M + D+V+F+ +I Y K + + + ++LF ++ + G+ +
Sbjct: 323 QNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ ++ + ++ A L + M GV P+V+TY L+ LC KL++A + F+++
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ ++ I Y ++ + G E+ + L S+ G +P TY ++I +
Sbjct: 443 KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 502
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ ++ E+GN P+ +Y LI A +G L + + EMK
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 8/293 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I + K K A L EM P+ +T +L+ YC + + A N
Sbjct: 278 FNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLM---DGYCMQNRLSEANNMLD 334
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
R + I F L+ C+ K V + L +K NT +++I++ G+C
Sbjct: 335 LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS- 393
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G AE ++ EM G+ DV+++ ++ L K L +F+ +++ + D +Y
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + KG V+DA +L S+ KGV PNV+TY +I LCK L EA +M +
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFS 356
G P TY+ + +R G+ L+E M+ G + M+I S
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 172/405 (42%), Gaps = 47/405 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL------------- 106
GY T ++T+I L K A L+ M P++VT ++
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 107 LILIRR------------YCAVHD-------VGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
L L+R+ Y + D + AI+ F + + + L+
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ D L+ ++ + P N +FN++++ + G +EA ++ EM +GI
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIP-NVITFNVLIDVFVKE-GKLQEANELYKEMITKGIS 307
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ ++++ ++ Y L + + D M R D + ++I K + V + + L
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+ + ++G+ N VTY+ L++ C++ KL+ A + F EM+ G+ P + TY LD +
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCD 427
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E+ + E ++K Y ++I+ + + + + ++ + G P+ +
Sbjct: 428 NGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 487
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I L G L EA+ +M+E P D +YN
Sbjct: 488 YTVMISGLCKKGSLSEANILLRKMEEDGNEP--------NDCTYN 524
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 17/256 (6%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+TK FN++L+ +C +M GI +++ + + +I+C+ + +
Sbjct: 77 STKQFNLVLD-FCK-------------KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ ++G E D +N +I+ L V +A+ L+ M E G PNVVTYNS++ +CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+ A +M +R + + TY +D + R G + L + M G + + T
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ + ++ + ++ +++ P+ ++ LI GKL+EA++ Y EM
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 408 EKQLLPEPKTDELLQD 423
K + P T L D
Sbjct: 303 TKGISPNTITYNSLMD 318
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 3/236 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM + +V FS S + + + VL +M+ GI + N +I
Sbjct: 48 DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + A S++ + + G P+ T+N+LI LC K+ EA M++ G
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY++ ++ I ++G+ LL M + + TY +I R +
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ G +Y +L+ L GK + Q +M ++++P T +L D
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L G L D + + G++ V Y ++ K D+A F EM++
Sbjct: 8 HLLDTGTLRTDFLCTIS-----GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPL 62
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P++ + F + + ++ +L+ +KM G T ++I F R + + V
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + G PD +++ LI+ L L K+ EA M E P T
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVT 172
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 180/391 (46%), Gaps = 22/391 (5%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ +++ +LS + + A ++A ++ ++ + Y+ M+ + + +F L+D
Sbjct: 187 NARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLD 246
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R I + L+SA
Sbjct: 247 LMRSRGCEPDLVSFNTL-INARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS 305
Query: 150 RYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + C D++ +N I + G C G SREA R++ ++ +G
Sbjct: 306 RESNLEEAVKVYNDMVAHRCQPDLWTYNAM---ISVYGRC---GMSREAGRLFKDLESKG 359
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+++ ++ +++ N+ KV + + M +MG D YN +IH K A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L M+ G +P+ VTY LI L KA + EA + EML + PT+RT+ A +
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 479
Query: 323 IRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ G EE F + M + G +P + Y +++ R+ + G K++ E+ +
Sbjct: 480 AKAGKRVEAEETF---DCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFK 536
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
PD + Y ++ L + E+ H+ +M+E
Sbjct: 537 PDHALYEVMLRVLGKENREEDVHKVVKDMEE 567
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 163/391 (41%), Gaps = 59/391 (15%)
Query: 37 VLSWV-RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
V+ WV ++ W+ A + W + Y+ + R T++++LGK + A
Sbjct: 159 VVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALA----------- 207
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
+ I R A + + NA G+ + R+ VQ
Sbjct: 208 ----------VEIFARAEAASGNTVQVYNAM---------------MGVYARTGRFTKVQ 242
Query: 156 DAEHLM---FCNKDVFPFNT------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+ LM C D+ FNT KS ++ N ++ E+ + GI
Sbjct: 243 ELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN----------EVRRSGIQP 292
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D+++++ +IS S+ NL + +++++ M + D YNA+I + + ++A L
Sbjct: 293 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 352
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RT 325
K +E KG P+ VTYNSL+ + +D+ ++ ++M++ G TY+ + + +
Sbjct: 353 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 412
Query: 326 GEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ F L M+ G P TY +LI + +V +E+ P ++
Sbjct: 413 GQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTF 472
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ALI GK EA + + M + P+
Sbjct: 473 SALICGYAKAGKRVEAEETFDCMLRSGIKPD 503
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISLMKS 268
++ ++ Y++ KV L D M+ G E D +N +I+A L G +V + AI L+
Sbjct: 225 YNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNE 284
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG- 326
+ G+ P+++TYN+LI + L+EA + +++M+ P + TY+A + + R G
Sbjct: 285 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 344
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E L + + G P TY L+ F+R V ++ ++ + G G D +Y
Sbjct: 345 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 404
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+IH G+ + A Q Y +MK P+ T +L D
Sbjct: 405 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLID 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 44/473 (9%)
Query: 26 GIKVSSELV-SEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT-MIAILGKVRKFDT 83
G++ S L S V+++ + + + + ++ G HT +I GK++ +
Sbjct: 706 GVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQK 765
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A +L+ +R T +V ++ LI Y A RA F R + ++ G
Sbjct: 766 AESLVGSLRQKCT---MVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNG 822
Query: 144 LLSALC-------RYKNVQDAEHLMF--------CNKDVFPFNTKSFNI----------- 177
L+ AL Y +Q+ + + F D F F +
Sbjct: 823 LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 882
Query: 178 ---------ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
I+ G R+ E + EM D+ ++ ++ Y+ + K
Sbjct: 883 YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTG 942
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+++ ++ G++ D YN +I + R ++ +SLM M G+ P + TY SLI
Sbjct: 943 QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1002
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTN 345
K + +++A + F+ +L + YH + + R + LL M++ G +PT
Sbjct: 1003 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1062
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
T +L+ +S Q KV + + G Y+++I A NG A Q ME
Sbjct: 1063 ATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLME 1122
Query: 406 MKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS-GQNTRVISKKSD 457
MK+ L P+ + + Q I LKA + R++++KSD
Sbjct: 1123 MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLLTEKSD 1175
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 14/342 (4%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG-IEDFQ 142
A L+D +R +G + + L+I++ C H +G A+ + + F G ++
Sbjct: 624 ARELLDFLREHSSGSHQLINEALIIML---CKAHQLGDALREYGKARDFGLFCGSFTMYE 680
Query: 143 GLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKS--FNIILNGWCNIIGSSREAERVWMEM 199
LL LC +N AE +F + + + ++ +C + G A + +
Sbjct: 681 SLL--LCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKM-GFPETAHYLIDQA 737
Query: 200 SQRGICYDVVSF-SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
++G+ +D VS + +I Y K + K L +++ DRKV+NA+IHA A
Sbjct: 738 EEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGC 797
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A ++ +M G +P V + N L++ L +LDE E+ G + +
Sbjct: 798 YERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITL 857
Query: 319 FLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
LD +F + + M+ G PT Y ++I ++ ++ +V + +E+
Sbjct: 858 MLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAR 917
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD S + +++ G ++ Q Y ++E L P+ T
Sbjct: 918 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDT 959
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEV 329
E V YN+++ + + + ++ D M RG P + +++ ++ +++G V
Sbjct: 215 EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMV 274
Query: 330 ----FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL +R+ G QP TY LI SR KV+N++ + PD +Y A
Sbjct: 275 TNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNA 334
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I G EA + + +++ K LP+ T
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVT 366
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 91/232 (39%), Gaps = 42/232 (18%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y+T+I + GK + D A+ L +M+ P VT
Sbjct: 394 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVT----------------- 436
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ L+ +L + +++A +M N V P ++F+
Sbjct: 437 ---------------------YTVLIDSLGKANMIKEAAEVMSEMLNARVKP-TLRTFSA 474
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G+ G EAE + M + GI D +++S ++ + K ++L+ +M
Sbjct: 475 LICGYAKA-GKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLH 533
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ D +Y ++ L K +D ++K MEE + V + L+K C
Sbjct: 534 SFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGEC 585
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 50/411 (12%)
Query: 48 AFTFFLWAGKQSGYAH-STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
+ FF WA + Y S Y+ MI + GKVR+FD AW LID M+ S+ +T
Sbjct: 133 SLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISI---ETF 189
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFC 163
ILIRRY G A A + + R + + D F ++S L R + +A+
Sbjct: 190 TILIRRYVR---AGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC------ 217
KD F + + ++ GWC G EAE+V+ +M GI +V ++S +I
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCR-AGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 218 -----------------------------YSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ KA KVL++++QMK++G E D YN
Sbjct: 306 ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNF 365
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I + +++A+ ++ +M +K N T+N++ + + K R ++ A + + +M++
Sbjct: 366 LIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P TY+ + + ++ + V + + M +P +TY +L+ F + N +
Sbjct: 426 CEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 366 KVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
K++ E + E P S Y ++ L G+L++ + +M +K L+ P
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVTRP 536
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++F I++ + G + EA + M G D ++FS +IS S+ R + FD
Sbjct: 187 ETFTILIRRYVRA-GLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFD 245
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+K E D VY ++ + + +A + K M+ G+ PNV TY+ +I LC+
Sbjct: 246 SLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYI 349
++ A F +ML G +P T++ + + ++ G E+V + M+K+GC+P TY
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYN 364
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI+ R N KV N + + + S++ + + + AH+ Y +M E
Sbjct: 365 FLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 410 QLLPEPKTDELL 421
+ P T +L
Sbjct: 425 KCEPNTVTYNIL 436
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I K R L D MK +E + + +I + L +A+ ME+ G
Sbjct: 157 MIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVF 330
P+ + ++ +I L + R+ EA+ FD + R P + Y + R GE E
Sbjct: 217 CVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ + M+ G +P TY ++I R Q V+ ++ ++G P+ ++ L+
Sbjct: 276 KVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL------KAHQPQ 444
G+ E+ Q Y +MK+ P+ T L + + +E + L K
Sbjct: 336 VKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 445 SGQNT--RVISKKSD 457
S NT R I KK D
Sbjct: 396 STFNTIFRYIEKKRD 410
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 8/267 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC Q+A L+ D P + S+ ++NG+ G S +A + EM
Sbjct: 172 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE-GDSDKAYSTYHEM 230
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
R I +VV++S II+ KA+ + K + + + M + G+ D YN+++H
Sbjct: 231 LDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 290
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+AI +K M GV PNVVTY SL+ LCK + EAR+ FD M +RG+ P I TY
Sbjct: 291 KEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTL 350
Query: 320 LDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L T E+ LL+ M + G QP + + +LI +++ + V++++ ++G
Sbjct: 351 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYY 403
P+ Y +I L +G +++A Y+
Sbjct: 411 NPNVVCYGTVIDVLCKSGSVDDAMLYF 437
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 155/384 (40%), Gaps = 59/384 (15%)
Query: 84 AWALIDEM-RGG--ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
A +L + M R G E P L T ILI C + A + F V
Sbjct: 76 AVSLFNRMARAGADEVTPDLCTYS---ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 132
Query: 141 FQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F LL LC K DA ++ C DVF S I+L G C+ S E
Sbjct: 133 FAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF-----SCTILLKGLCDENRSQEALE 187
Query: 194 RVWMEMSQRGICY--DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+ M RG DVVS++ +I+ + K + K + +M DR++
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM------LDRRI------ 235
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+PNVVTY+S+I LCKA+ +D+A + + M++ G+ P
Sbjct: 236 -----------------------SPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 272
Query: 312 TIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY++ L +G+ E G L+ MR G +P TY L+ + + K++
Sbjct: 273 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIF 332
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+ +++ G PD ++Y L+ G L E H M + P+ +L +Y K
Sbjct: 333 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI-CAYAK 391
Query: 429 QFVERQIASLKAHQPQSGQNTRVI 452
Q Q + + Q G N V+
Sbjct: 392 QEKVDQAMLVFSKMRQHGLNPNVV 415
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
RGG + P +V+ T+ I + D +A + ++ + + + + +++ALC+
Sbjct: 196 RGGGSPPDVVSYTTV---INGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKA 252
Query: 152 KNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NII- 186
+ + A ++ V P + ++N IL+G+C N++
Sbjct: 253 QAMDKAMEVLNTMVKNGVMP-DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 311
Query: 187 -----------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
G EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M
Sbjct: 312 YRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 371
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI+ D V+N +I A AK V A+ + M + G+ PNVV Y ++I LCK+ +D
Sbjct: 372 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 431
Query: 296 EARQAFD 302
+A F+
Sbjct: 432 DAMLYFE 438
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 17/287 (5%)
Query: 137 GIED---FQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
GI D + LL+ LC Q+A H+M + P + S++ ++NG+ +
Sbjct: 47 GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------FK 100
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E + M + QR I +VV+++ II+ KA+ + K + + M + G+ D YN+++
Sbjct: 101 EGDLDKM-LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV 158
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H K+AI +K M GV P+VVTYNSL+ LCK + EAR+ FD M +RG+
Sbjct: 159 HGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 218
Query: 311 PTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY L T E+ GLL+ M + G P + + +L+ +++ + V
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++++ + G P+ +Y +I L +G++E+A Y+ +M ++ L P+
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 39/386 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++IA L K + D A ++ M P +T ++ + +C+ AI
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI---VHGFCSSGQPKEAIVFLK 175
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+ LC+ +A + + + P + ++ +L G+
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP-DITTYGTLLQGYATK 234
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI + FS ++ Y+K + + + +F +M++ G+ +
Sbjct: 235 -GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI L K V+DA+ + M ++G+ P+ + YNSLI LC K ++A + F EML
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 306 QRGISPTIRTYHAFLD-------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR- 357
RGI + +++ +D +I +G+ L + M ++G +P T + R
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGK----LFDLMVRIGVKPDIITLGRFLGSARRD 409
Query: 358 WRQFGNVFKVWNEISENGN--------------------GPDRSSYTALIHALFLNGKLE 397
+ F N++ ++ +S G+ GP +Y ++H L N +
Sbjct: 410 YSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTD 469
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
+A + + + L E +T ++ D
Sbjct: 470 DALRMFQNLCLMDLKLEARTFNIMID 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+D+M P++VT ++ I C V +A+ + + ++
Sbjct: 104 LDKMLDQRISPNVVTYNSI---IAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 148 LCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
C + Q E ++F K DV +N+ + NG C EA +++ M
Sbjct: 161 FC--SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT------EARKIFDSM 212
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++RG+ D+ ++ ++ Y+ L ++ L D M R GI + V++ ++ A AK V
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A+ + M ++G+ PN VTY ++I LCK+ ++++A F++M+ G+ P Y++
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Query: 320 L 320
+
Sbjct: 333 I 333
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 144/356 (40%), Gaps = 32/356 (8%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
IL+ Y V A+ F ++ + ++ LC+ V+DA E ++
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI-- 318
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++ + P ++ +N +++ C I +AE +++EM RGIC + F+ II + K
Sbjct: 319 DEGLRP-DSIVYNSLIHSLC-IFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG-RLVKDAISLMKSMEEKG--------- 273
+ + +LFD M R+G++ D + + + L + + +M G
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436
Query: 274 -----------VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
P + TYN ++ LCK + D+A + F + + RT++ +D
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+++ G +E L + G P TY ++ + + +++ + +NG D
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
++ L G++ A Y + EK E T L D ++ E I
Sbjct: 557 SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHI 612
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 35/207 (16%)
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA------------------- 300
+DA + + +G+ P+V +YN L+ LC + EA +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 301 -----------FDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTND 346
D+ML + ISP + TY++ + + +T ++ +L +M K G P
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++ F Q ++ +G PD +Y +L+ L NG+ EA + + M
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 407 KEKQLLPEPKT-DELLQDWSYNKQFVE 432
++ L P+ T LLQ ++ VE
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVE 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 146/370 (39%), Gaps = 44/370 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++ K K + A + +MR P+ VT T++ ++ + GR +A
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS------GRVEDAML 312
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNGW 182
+++ G+ + L+ +LC + + AE L D +T FN I++
Sbjct: 313 YFEQM-IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH-KVLRLFDQMKRMGIEC 241
C G E+ +++ M + G+ D+++ + + +L + +F M G
Sbjct: 372 CKE-GRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTG--- 427
Query: 242 DRK-----------------------VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
D++ YN ++H L K +L DA+ + +++ +
Sbjct: 428 DKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 487
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLES 335
T+N +I L K + DEA+ F G+ P TY +II G EE+ L S
Sbjct: 488 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 547
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M GC + ++++ + + + I E + S+ + I L GK
Sbjct: 548 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGK 606
Query: 396 LEEAHQYYME 405
+E H + E
Sbjct: 607 YQEYHIFLPE 616
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 20/321 (6%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
LI C D+ RA+ FY F I + L+ L + V A LM
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ D++ ++N+++NG C + G +A + + +G D+ +F+ +I Y K R
Sbjct: 422 CSPDIW-----TYNLVVNGLCKM-GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N+ K + + D M GI D YN +++ L K R + + + K+M EKG PN++TYN
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE-----EVFGLLESM 336
LI+ CK RK+ EA + F EM RG++P I T + + GE E+F +E
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
K + + ++I F K+++++ + PD +Y +I + G +
Sbjct: 596 YKF--SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 397 EEAHQYYMEMKEKQLLPEPKT 417
+ AH + +E K L+P T
Sbjct: 654 DLAHTFLLENISKGLVPSFTT 674
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 10/381 (2%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+ V+ + +ND A F + G+ H+ Y MI LG KF+ ++ EMR
Sbjct: 10 VAAVIRY-QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR- 67
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+ S + + + ++R Y V A+N F + ++ + +++ L Y
Sbjct: 68 -KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 154 VQDAEHLMFCNKDV--FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
A + KD+ +P + + I + +C I G A R+ M +G ++ VS+
Sbjct: 127 FSQAHKVYMRMKDIGIYP-DVYTHTIRMKSFC-ITGRPTAALRLLNNMPGQGCEFNAVSY 184
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+IS + K + LFD+M + GI D +N +IH L K V+++ L + +
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--E 328
+GV PN+ T+N I+ LC+ +DEA + + ++ G++P + +Y+ + + + E
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L M G +P TY +I F + N K+ + G PD +Y++LI+
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 389 ALFLNGKLEEAHQYYMEMKEK 409
L +G + A + E EK
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEK 385
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 12/366 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ +I +L K + L ++ P+L T + + R A+
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKS 174
+ R + + + + + L+ C++ + +AE H M N V P N +
Sbjct: 269 EAARLLESIVSEG---LTPDVISYNTLICGFCKHSKLVEAECYLHKMV-NSGVEP-NEFT 323
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N I+NG+C G + A+++ + +G D ++S +I+ ++++ + +F +
Sbjct: 324 YNTIINGFCKA-GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G + +YN ++ L+K LV A+ LMK M E G +P++ TYN ++ LCK L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A ++ + +G P I T++ +D R ++ +L++M G P TY L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + R+ NV + + E G P+ +Y LI + + K+ EA + + EMK + L
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 412 LPEPKT 417
P+ T
Sbjct: 563 TPDIVT 568
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 148/362 (40%), Gaps = 61/362 (16%)
Query: 113 YCAVHDVGRAINAFY-------AYKRFK------FAVGIEDFQGLLSALCRYKNVQDAEH 159
YCAV I+ FY AY F I F L+ LC+ NVQ++E
Sbjct: 184 YCAV------ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 160 LM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L + V P N +FNI + G C G+ EA R+ + G+ DV+S++ +I
Sbjct: 238 LFSKVMKRGVCP-NLFTFNIFIQGLCRK-GAIDEAARLLESIVSEGLTPDVISYNTLICG 295
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K L + +M G+E + YN +I+ K ++++A +++ KG P+
Sbjct: 296 FCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD 355
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDE---------------------------------- 303
TY+SLI LC ++ A F E
Sbjct: 356 EFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 304 -MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M++ G SP I TY+ ++ + + G + G+L GC P T+ LI + + R
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
++ + + +G PD +Y L++ L KL+ + M EK P T
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 420 LL 421
+L
Sbjct: 536 IL 537
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 10/260 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K+ A ++++ P + T TL I YC ++ +AI
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL---IDGYCKQRNMDKAIEILD 485
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYK---NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + LL+ LC+ + NV D M K P N ++NI++ +C
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML-EKGCTP-NIITYNILIESFCK 543
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDR 243
S EA ++ EM RG+ D+V+ +I L K LF + K
Sbjct: 544 DRKVS-EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
++N +I+A + V A L M AP+ TY +I CK +D A E
Sbjct: 603 AIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662
Query: 304 MLQRGISPTIRTYHAFLDII 323
+ +G+ P+ T L+ +
Sbjct: 663 NISKGLVPSFTTCGKVLNCL 682
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+I K R D A ++D M P ++T TLL C + ++ F
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL---NGLCKARKLDNVVDTFK 520
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A I + L+ + C+ + V +A L + + P + + ++ G C+
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP-DIVTLCTLICGLCSN 579
Query: 186 IGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +A +++ + + Y F+ +I+ + + N+ +LF +M D
Sbjct: 580 -GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNY 638
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I + K + A + + KG+ P+ T ++ LC +L EA + M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698
Query: 305 LQRGISP 311
+Q GI P
Sbjct: 699 VQNGIVP 705
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 183/411 (44%), Gaps = 43/411 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R D ++AF F + G + Y +I L R+ D A L +M+ + P
Sbjct: 266 RKDLDSAFKVFKEMPLK-GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYP--- 321
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T +T +LI+ C A+N + I + L+ +LC ++ A L+
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381
Query: 162 --FCNKDVFPFNTKSFNIILNGWC------------------NIIGSSR----------- 190
K + P N ++N ++NG+C N+ ++R
Sbjct: 382 GQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440
Query: 191 ----EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+A V +M +R + DVV+++ +I ++ N RL M G+ D Y
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I +L K + V++A L S+E+K V PNVV Y +LI CKA K++EA ++ML
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS 560
Query: 307 RGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ P T++A + + T +E L E M K+ QPT T +LI + + F +
Sbjct: 561 KNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDH 620
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ + ++ +G PD +YT I G+L++A +MKE + P+
Sbjct: 621 AYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPD 671
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 25/362 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ M+ KV + A + + P T +L I YC D+ A F
Sbjct: 221 YNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL---IMGYCQRKDLDSAFKVFK 277
Query: 128 -----AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILN 180
+R + A + L+ LC + + +A L KD +P +++ +++
Sbjct: 278 EMPLKGCRRNEVA-----YTHLIHGLCVERRIDEAMDLFVKMKDDDCYP-TVRTYTVLIK 331
Query: 181 GWCNIIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
C GS R++E + + EM ++GI ++ +++ +I L K L QM G
Sbjct: 332 ALC---GSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YNA+I+ K +++DA+ +++ ME + + PN TYN LIK CK R + +A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAM 447
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
++ML+R + P + TY++ +D R+G + + LL M G P TY +I
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL 507
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ ++ +++ + + P+ YTALI GK+ EAH +M K LP
Sbjct: 508 CKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567
Query: 416 KT 417
T
Sbjct: 568 LT 569
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 187/444 (42%), Gaps = 75/444 (16%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
+S VS + S + D + A F W + Y HS Y +++ +L
Sbjct: 88 ISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLL------------- 133
Query: 89 DEMRGGETGPSLVTKQTLLIL-----IRRYCAVHDVGRAINAFYAYK-RFKFAVGIEDFQ 142
+ G G +V K LL++ + V D+ R +N +++ ++K +G +
Sbjct: 134 --INNGYVG--VVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGC--YN 187
Query: 143 GLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
LL++L R+ V + + + M +D N ++N ++NG+C + G+ EA + + +
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKV-GNVEEANQYVSMIVE 246
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G+ D +++ +I Y + ++L ++F +M G + Y +IH L R + +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDE 306
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ L M++ P V TY LIK LC + + EA EM ++GI P I TY +D
Sbjct: 307 AMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLID 366
Query: 322 -----------------IIRTG---------------------EEVFGLLESMRKMGCQP 343
++ G E+ ++E M +P
Sbjct: 367 SLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRP 426
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LIK + + R V N++ E PD +Y +LI +G + A++
Sbjct: 427 NTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 404 MEMKEKQLLPEPKTDELLQDWSYN 427
M ++ L+P+P W+Y
Sbjct: 486 SLMNDRGLVPDP--------WTYT 501
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 151/366 (41%), Gaps = 63/366 (17%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+++I + FD+A+ L+ M RG P T +I C V A +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS-----MIDSLCKSKRVEEACDL 519
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGW 182
F + ++ + + L+ C+ V +A HLM +K+ P N+ +FN +++G
Sbjct: 520 FDSLEQKDVIPNVVMYTALIDGYCKAGKVNEA-HLMLEKMLSKNCLP-NSLTFNALIHGL 577
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G +EA + +M + + V + + +I K + R F QM G + D
Sbjct: 578 CTD-GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPD 636
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y I + ++DA ++ M+E GV+P++ TY+SLIK
Sbjct: 637 AHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIK---------------- 680
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF------- 355
+ D+ RT F +L+ M GC+P+ T++ LIK
Sbjct: 681 ---------------GYGDLGRTN-SAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 356 -----------SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
S +F V ++ ++ E+G P+ SY L+ + G L A + +
Sbjct: 725 VKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFD 784
Query: 405 EMKEKQ 410
M++K+
Sbjct: 785 HMQQKE 790
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 36/305 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG Y T I + + A ++ +M+ P L T +L I+ Y D
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL---IKGY---GD 684
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCR------YKNVQDAEHLMFCNKDVFPFNT 172
+GR +AF KR G E Q +L + Y V+ E + N
Sbjct: 685 LGRTNSAFVVLKRMH-DTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV-----CVMSNM 738
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
F+I++ + +M + G+ + S+ ++ + NL ++FD
Sbjct: 739 MEFDIVV--------------ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFD 784
Query: 233 QMK-RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M+ + GI V+NA++ K +A ++ M G P + + LI L K
Sbjct: 785 HMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKK 844
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTY 348
+ + F +LQ G + +D + + G E + L M K GC ++ TY
Sbjct: 845 GEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTY 904
Query: 349 IMLIK 353
+LI+
Sbjct: 905 SLLIE 909
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLI 285
V+ L ++M G+ + K Y ++ + + ++ A + M++K G++P+ + +N+L+
Sbjct: 744 VVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQ 342
CK K +EA + D+M+ G P + + + + + GE+ G + +++ + G
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ ++I + ++++N + +NG +Y+ LI
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 170/359 (47%), Gaps = 11/359 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + ++ ++ +L K F+ AW + +E +G + + I+I+ C V +
Sbjct: 112 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVK----LDVYSFGIMIKGCCEVGYL 167
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNI 177
+ + + + + L+ C+ +++ + L + DV N ++ +
Sbjct: 168 DKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVA-NQYTYTV 226
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+ + G ++ ++ +M GI +V +++ +I L+ LFD+M+
Sbjct: 227 LINGFFKM-GLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 285
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ C+ YN +I L + R V +A LM M+ G++PN+++YN+LI C LD+A
Sbjct: 286 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 345
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKK 354
F++M G SP++ TY+ + + G+ + +R+M G P+ TY +L+
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R F++++ + + G D Y LIH L + G ++EA + + + E L P
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 464
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 39/316 (12%)
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
G F LL L + + A + K + SF I++ G C + G + V
Sbjct: 116 GSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEV-GYLDKGFEVL 174
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+M + G+ +VV ++ +I K ++ + +LF +M + + ++ Y +I+ K
Sbjct: 175 GQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKM 234
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI------- 309
L KD I L + M+ G+ PNV TYNS+I C KL+ A + FDEM +RG+
Sbjct: 235 GLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTY 294
Query: 310 ----------------------------SPTIRTYHAFLD---IIRTGEEVFGLLESMRK 338
SP + +Y+ +D I ++ L M+
Sbjct: 295 NTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS 354
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P+ TY +LI FS + V + E+ G P + +YT L+ AL + +E+
Sbjct: 355 SGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEK 414
Query: 399 AHQYYMEMKEKQLLPE 414
A Q Y M++ L+ +
Sbjct: 415 AFQIYSSMEKAGLVAD 430
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 10/302 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + Y++MI K + A+ L DEMR ++VT TL I C
Sbjct: 248 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL---IGGLCQE 304
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV--FPFNTKS 174
V A KR + + + L+ C N+ A L K P + +
Sbjct: 305 RRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP-SLAT 363
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI++ G+ S+ + V EM RG+ V+++ ++ ++ N+ K +++ M
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVR-EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ G+ D +Y +IH L +K+A L KS++E + PN V YN++I CK
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
A + EM + G+ P + +Y++ + I+ E E LL+ M ++G +P+ + M+
Sbjct: 483 YRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Query: 352 IK 353
K
Sbjct: 543 SK 544
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL-------------------- 284
++ A+I+A + +L + A+ M +G+ P T+N+L
Sbjct: 84 IHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET 143
Query: 285 --------------IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIR 324
IK C+ LD+ + +M + G+SP + Y +D I
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
G+++F M ++ TY +LI F + + +++ ++ G P+ +Y
Sbjct: 204 RGKQLF---YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEK 409
++I +GKL A + + EM+E+
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRER 285
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 75/395 (18%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++ A Y +++ + +F A A+ M G P+LVT +
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVV----------- 225
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
F+AY K +V ++ L+ ++ +D +D + +NT
Sbjct: 226 --------FHAYS--KMSVPWKEVVALVDSM-----KEDG-----IERDRYTYNT----- 260
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L C G REA +V+ EM G D V+F+ ++ Y KAR + + + +M+
Sbjct: 261 -LISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENA 319
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G YN++I A K L+++A+ L + ME +G+ P+VVTY +LI L + K+D A
Sbjct: 320 GCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAA 379
Query: 298 RQAFDEMLQRGISPTIRTYHAFL----------------DIIRTG--------------- 326
+ EM++ G SP + TY+A + D +R+
Sbjct: 380 LATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSV 439
Query: 327 -------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
EV G+ + M+K G P DTY+ LI +SR F +++ + E G PD
Sbjct: 440 FGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPD 499
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
S+Y A++ AL G+ E+A + + EM ++ P+
Sbjct: 500 ISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPD 534
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+SA R +DA + + V P ++N++ + + + +E +
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQP-ALVTYNVVFHAYSKMSVPWKEVVALVDS 245
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHK-VLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M + GI D +++ +ISC + R LH+ ++FD+MK G E D+ +N+++ K R
Sbjct: 246 MKEDGIERDRYTYNTLISC-CRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++AI ++K ME G P+VVTYNSLI K L+EA + EM RG+ P + TY
Sbjct: 305 KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 364
Query: 318 AF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
LD + + M + GC P TY LIK +F + V++++
Sbjct: 365 TLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD ++ L+ NG E + EMK+ +PE T
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDT 467
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 151/388 (38%), Gaps = 82/388 (21%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I+ L +V K D A A EM P+L T L+ L H V
Sbjct: 363 YTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKL-------HGV-------- 407
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
R KF + F L SA DV +NT NG
Sbjct: 408 ---RGKFTEMMAVFDDLRSA--------------GYVPDVVTWNTLLSVFGQNGL----- 445
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E V+ EM + G + ++ +IS YS+ + + ++ +M GI D YN
Sbjct: 446 -DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------ 295
AV+ ALA+G + A L M ++ P+ ++Y+SL+ A+KLD
Sbjct: 505 AVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAE 564
Query: 296 -----------------------EARQAFDEMLQRGISPTIRTYHAFLDI------IRTG 326
E +AF E+ +R S I +A + I ++
Sbjct: 565 RIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV 624
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EEV L M + + TY L+ +SR + EI +G PDR SY +
Sbjct: 625 EEVLSL---MMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTV 681
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPE 414
I+A G+++EA + + EMK + P+
Sbjct: 682 IYAYGRKGQMKEASRLFSEMKCSGVKPD 709
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 150/368 (40%), Gaps = 60/368 (16%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY--C 114
+ +GY ++T++++ G+ + EM+ P + T + LI Y C
Sbjct: 422 RSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPE---RDTYVSLISSYSRC 478
Query: 115 AVHDVGRAINAFYAYKRFKFA---VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
+ D A YKR A I + +LSAL R + AE L ++D P
Sbjct: 479 GLFD-----QAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKP 533
Query: 170 FNTKSFNIILNGWCNI----------------------------------IGSSREAERV 195
+ S++ +L+ + N + + E E+
Sbjct: 534 -DELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKA 592
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ E+ +R D+ + ++S Y K + + KV + M I YN+++H ++
Sbjct: 593 FQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSR 652
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ S++ ++ G+ P+ +YN++I + ++ EA + F EM G+ P I T
Sbjct: 653 LGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVT 712
Query: 316 YHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ-------FGNVF 365
Y+ F+ EE L+ + GC+P T+ +++ +SR + N+
Sbjct: 713 YNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLP 772
Query: 366 KVWNEISE 373
K++ IS+
Sbjct: 773 KIYPGISK 780
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 169/403 (41%), Gaps = 55/403 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G+ +++++ + GK RK + A ++ M PS+VT +L I Y
Sbjct: 282 KAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSL---ISAYVKD 338
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFP 169
+ A+ + + + L+S L R + DA + C+ ++
Sbjct: 339 GLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKI-DAALATYSEMVRNGCSPNLCT 397
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+N I L+G + G E V+ ++ G DVV+++ ++S + + +V
Sbjct: 398 YNAL---IKLHG---VRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSG 451
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +MK+ G +R Y ++I + ++ L A+ + K M E G+ P++ TYN+++ L
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALA 511
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTY----HAF-----LDIIRT-GEEVFG-------- 331
+ + ++A + F EM+ R P +Y HA+ LD ++T E+++
Sbjct: 512 RGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNW 571
Query: 332 --------------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ +R+ C + ++ + + + V +V + +
Sbjct: 572 LVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLM 631
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
EN ++Y +L+H G E+ E+K + P+
Sbjct: 632 MENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPD 674
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 48/345 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G Y+T+I+ + A + DEM+ P VT +LL
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLL--------- 297
Query: 117 HDV-GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 175
DV G+A ++ + A+G+ L R +N C V +N+
Sbjct: 298 -DVYGKA-------RKHEEAIGV---------LKRMENAG-------CTPSVVTYNSLIS 333
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +G EA + EM RG+ DVV+++ +IS + + L + +M
Sbjct: 334 AYVKDGLLE------EALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMV 387
Query: 236 RMGIECDRKVYNAVI--HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
R G + YNA+I H + +G+ + +++ + G P+VVT+N+L+ +
Sbjct: 388 RNGCSPNLCTYNALIKLHGV-RGKFT-EMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGL 445
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
E F EM + G P TY + + R G ++ + + M + G P TY
Sbjct: 446 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNA 505
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
++ +R ++ K++ E+ + PD SY++L+HA + N K
Sbjct: 506 VLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHA-YANAK 549
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 17/375 (4%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A +FF WAG+Q+G+ H Y+ ++ +L + + +A+ +EM P+ +
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFN--- 158
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---EHLMFCN 164
ILIR + A+ F KR + + F L+ LC+ + A H M
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 165 KDVFP---FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
V P +T +L +EA V+ +M + G D ++++ +I +KA
Sbjct: 219 GFVPPDRALHTAMVRTLLKAK-----RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKA 273
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + L++ D M Y ++++L K ++ A L + M G PN V Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
SLI K+ ++ EA FDEM++ G P + T+ +D + ++G E+ E M +
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC+P TY +I+ S+ + N F++ + +G PD +Y L+ G+L+E
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 399 AHQYYMEMKEKQLLP 413
A Q E+ + P
Sbjct: 454 AAQLLDELDKCSSSP 468
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 161/384 (41%), Gaps = 49/384 (12%)
Query: 60 GYAHSTREYHT-MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G+ R HT M+ L K ++ A + +M P + T++ + + +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLL-SALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
+ ++ A K V E G+L ++LC+ ++ AE L F N+ +
Sbjct: 279 ALKVLDNMLA----KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYT 334
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G+ G +EA ++ EM + G DV++ + +I K+ N + + F++M R
Sbjct: 335 SLIHGFAKS-GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + + Y +I L+K V +A +MK M G P+ VTY L+ CK +LDE
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 297 ARQAFDEMLQRGISPTIRTYHAF------------------------------------- 319
A Q DE+ + SP ++ Y +
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSII 513
Query: 320 LDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ--FGNVFKVWNEISENG 375
+ + +TG +E + + M GC+P TY +LI R R+ F + +++ G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG 573
Query: 376 NGPDRSSYTALIHALFLNGKLEEA 399
PD +YT L L G+++ A
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRA 597
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 28/357 (7%)
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K+ + D A L+DE+ + P+L Q L++ C V ++ + +
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNL---QLYSSLVKGLCDGGSVENTLDDLFEQSK----A 499
Query: 137 GIEDFQ-----GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
E+ ++ LC+ + +A + ++ P + ++NI++NG C S
Sbjct: 500 AAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKP-DATTYNILINGLCR----S 554
Query: 190 RE--AERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
RE ER + ++ G D V+++ + K + + +++ ++ G D
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y A+ L V A+SL + M +G AP+ Y +I L K +KL++A + FDEM
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEM 674
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQ 360
+ +G PT+ TY A + + G +E F E M G + Y LI F + +
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALK 734
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K++ ++ GN P + +L L +GK E+A + EM P T
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 4/230 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + GI + SF+ +I +++ R + F+ MKR + D + ++ L K
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203
Query: 258 LVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ + A + M G V P+ + ++++ L KA+++ EAR+ F +M + G P Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263
Query: 317 HAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ +D + + G +E +L++M C PT TY +L+ + +++ ++
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+G P+ YT+LIH +G+++EA + EM E P+ T ++ D
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 7/222 (3%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ + G C I G A ++ E S RG DVV+++ + + + + + LF +
Sbjct: 580 TYTPLCIGLCKI-GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQE 638
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R G D Y +I+ L KG+ ++DA M KG P V TY +L++ LC A
Sbjct: 639 MVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGN 698
Query: 294 LDEARQAFDEMLQRG-ISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
+DEA F+ ML RG + ++ Y H F ++ + L E M G PT T
Sbjct: 699 VDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKV-DAALKLFEDMISRGNVPTAVTS 757
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L R + ++ E++ G+ P +++TA++ L
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 145/369 (39%), Gaps = 50/369 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY + MI L K F+ A +EM G P++VT T++ + + V
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFN 176
+ R + A+ F +V + LL C+ + +A L+ +K N + ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSV---TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474
Query: 177 IILNGWC------NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++ G C N + E + E G+C ++ C K L + R+
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC------KTGRLDEACRI 528
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGR--LVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
F +M G + D YN +I+ L + R V+ A +L+ +E G P+ VTY L L
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGL 588
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
CK ++D A + +E RG + + Y A
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTA------------------------------ 618
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L Q ++ E+ G PD ++Y +I+ L KLE+A +++ EM
Sbjct: 619 --LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIG 676
Query: 409 KQLLPEPKT 417
K P T
Sbjct: 677 KGQKPTVAT 685
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 154/400 (38%), Gaps = 46/400 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G+ Y+TMI L K A ++D M P+ VT IL+ C
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG---ILVNSLCKA 308
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--------------- 161
+ RA F F + L+ + +++A L
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368
Query: 162 ------FCNKDVFPFNTKSFNIILNGWC--NI------------IGSSREAERVWMEMSQ 201
C F KSF ++ G C N+ IG A R+ M
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D V++ C++ + K L + +L D++ + + ++Y++++ L G V++
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488
Query: 262 AISLMKSMEEKGVAPNVVT--YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ + + K A N+ S+I LCK +LDEA + F M+ G P TY+
Sbjct: 489 TLDDLFE-QSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL 547
Query: 320 LD-IIRTGEE----VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ + R+ E F LL + +G P TY L + + K+ E S
Sbjct: 548 INGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G D +YTAL L G+++ A + EM + P+
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 12/273 (4%)
Query: 68 YHTMIAILGKVR--KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+ +I L + R + + A+AL+ ++ P VT L I + C + +V RA+
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGL---CKIGEVDRAVKM 600
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ + + L + LC V A L + P + ++ I+NG
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP-DAAAYCCIINGL- 658
Query: 184 NIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IEC 241
I G E A + + EM +G V +++ ++ A N+ + F+ M G +
Sbjct: 659 -IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+Y+A+IH K V A+ L + M +G P VT SL L ++ K ++A++
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
EM G P T+ A LD +R +E LL+
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 94/203 (46%), Gaps = 4/203 (1%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
++ G + D YN +++ L + ++ + M + G+APN ++N LI+ + R+
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT-YIM 350
D+A F+ M ++ P + T+ +D + + G E+ F + M MG P + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+++ + ++ +V+ ++ + G PD +Y +I L G +EA + M K
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 411 LLPEPKTDELLQDWSYNKQFVER 433
+P T +L + +ER
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLER 313
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 172/366 (46%), Gaps = 10/366 (2%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
L G + G + + T+I LGKV KF A L D+M P T T+ I
Sbjct: 33 LAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTI---ING 89
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
C + + A F + + + + L+ +LC+Y+ V +A + KD+ P
Sbjct: 90 LCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISP- 148
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++ ++ G CN +EA + EM+ I +VV+F+ ++ + K + +
Sbjct: 149 TIFTYTSLIQGLCNF-SRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGV 207
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M MG+E D YN++++ + V +A L M KG P+V +Y+ LI CK
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDT 347
A+++DEA+Q F+EM+ +G +P +Y+ + + + G E L ++M G P T
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ F + G F+++ + P+ Y L++A+ +G L++A + + E+
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF 387
Query: 408 EKQLLP 413
L P
Sbjct: 388 VIGLQP 393
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 15/347 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
TL ILI +C + V + + I F L++ L + A L
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C D + + T I+NG C I G + A ++ +M + G +VV++S +I
Sbjct: 72 VARGCQPDDYTYTT-----IINGLCKI-GETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K R +++ L +F MK I Y ++I L K+A +L+ M + PNV
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLES 335
VT+N L+ CK K+ A M + G+ P + TY++ + EV L +
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M GC+P +Y +LI + + ++ +++NE+ G+ P+ SY LIH L G+
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
L EA + M LP T +L D + ++ + +A Q
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ 352
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 47/285 (16%)
Query: 171 NTKSFNIILNGWCNI----IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
NT + NI++N +C + +G S A+ + + G+ +V+F+ +I+ K +
Sbjct: 9 NTCTLNILINCFCQLQRVDLGFSVLAKGI-----KLGLQPTIVTFTTLINGLGKVGKFAQ 63
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ LFD M G + D Y +I+ L K A L K MEE G NVVTY++LI
Sbjct: 64 AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTY------------------------------ 316
LCK R+++EA F M + ISPTI TY
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183
Query: 317 -----HAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ +D +V G+L++M +MG +P TY L+ +S W + K++
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + G PD SY+ LI+ +++EA Q + EM + P
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTP 288
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 150/363 (41%), Gaps = 53/363 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G + Y T+I L K R+ + A + M+ + P++ T +L I+ C
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL---IQGLCNF 163
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
A + F L+ C+ V AE + M DV +
Sbjct: 164 SRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTY 223
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N+ + + W ++ EA +++ M +G DV S+S +I+ Y KA+ + + +L
Sbjct: 224 NSLMYGYSM--WTEVV----EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277
Query: 231 FDQMKRMGIECDRKVYNAVIHALAK-GRL------------------------------- 258
F++M G + YN +IH L + GRL
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337
Query: 259 ---VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ A L ++M+ + PN+V YN L+ +CK+ L +AR+ F E+ G+ P ++
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y ++ + + G +E +M GC P +Y ++I+ F + + + E+
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Query: 373 ENG 375
+ G
Sbjct: 458 DRG 460
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 10/241 (4%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ + + + +I+C+ + + + + + ++G++ + +I+ L K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A+ L M +G P+ TY ++I LCK + A F +M + G + TY
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 319 FLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK---KFSRWRQFGNVFKVWNEIS 372
+ + R E + M+ PT TY LI+ FSRW++ + NE++
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKE---ASALLNEMT 177
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFV 431
P+ ++ L+ GK+ A M E + P+ T + L+ +S + V
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237
Query: 432 E 432
E
Sbjct: 238 E 238
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 172/361 (47%), Gaps = 22/361 (6%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y T+I L KV + A L+ + G P++V T+ I C V V A + +
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTI---IDSMCKVKLVNEAFDLY 201
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGW 182
+ + + L+S ++DA L NK + N K +FNI+++G+
Sbjct: 202 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF--NKMILE-NIKPDVYTFNILVDGF 258
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G +E + V+ M ++GI +VV++ ++ Y + ++K +F+ M + G+ D
Sbjct: 259 CKD-GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD 317
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ YN +I+ K + V +A++L K M K + PNVVTY SLI LCK+ K+ A + D
Sbjct: 318 TQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVD 377
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTND-----------TYIML 351
EM RG+ P I TY + LD + +V + + K+ Q D Y ++
Sbjct: 378 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVM 437
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I+ F F + +++ +NG PD +Y +I +LF + + A + EM + L
Sbjct: 438 IQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Query: 412 L 412
L
Sbjct: 498 L 498
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 177/410 (43%), Gaps = 28/410 (6%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
++ ++ND + F Q E+ ++ L K+ + TA +L +M
Sbjct: 33 ITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIA 92
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
+LVT L ILI + + + + F + + + L+ LC
Sbjct: 93 SNLVT---LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCL------- 142
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
S+ ++NG C + G +R A ++ + + + +VV ++ II
Sbjct: 143 --------------KVSYGTLINGLCKV-GQARAALQLLRRVDGKLVQPNVVMYNTIIDS 187
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
K + +++ L+ +M GI D Y+A+I +KDAI L M + + P+
Sbjct: 188 MCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPD 247
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLE 334
V T+N L+ CK K+ E + F M+++GI P + TY + +D +++ + +
Sbjct: 248 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFN 307
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
+M + G P +Y ++I F + ++ ++ ++ P+ +YT+LI L +G
Sbjct: 308 TMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
K+ A + EM ++ + P+ T + D V++ IA L + Q
Sbjct: 368 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 14/363 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
++ E + LG +KFD A D + S++ + I+I V A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAA 193
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLM---FCNKDVFPFNTKSFNI 177
N F + F++ + + L+SA RY+ + M C + ++N+
Sbjct: 194 NLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLI-----TYNV 248
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
ILN + + + + +M GI D +++ +I+C + + ++F++MK
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA 308
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D+ YNA++ K K+A+ ++ ME G +P++VTYNSLI + LDEA
Sbjct: 309 GFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ ++M ++G P + TY L R G E + E MR GC+P T+ IK
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKM 428
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ +F ++ K+++EI+ G PD ++ L+ NG E + EMK +PE
Sbjct: 429 YGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 415 PKT 417
+T
Sbjct: 489 RET 491
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 199/473 (42%), Gaps = 87/473 (18%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G++H Y+ ++ + GK + A +++EM PS+VT +L+ R +
Sbjct: 306 KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGML 365
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---------------- 160
+ N A K K V + LLS R V+ A ++
Sbjct: 366 DEAMELKNQM-AEKGTKPDVFT--YTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTF 422
Query: 161 -----MFCNKDVFPFNTKSFNII--------LNGWCNII------GSSREAERVWMEMSQ 201
M+ N+ F K F+ I + W ++ G E V+ EM +
Sbjct: 423 NAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G + +F+ +IS YS+ + + + ++ +M G+ D YN V+ ALA+G + +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 262 AISLMKSMEEKGVAPNVVTYNSL------------------------IKP---------- 287
+ ++ ME+ PN +TY SL I+P
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 288 LC-KARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMG 340
+C K L EA +AF E+ +RG SP I T ++ + I + EV L+ M++ G
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEV---LDYMKERG 659
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+ TY L+ SR FG ++ EI G PD SY +I+A N ++ +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 401 QYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIASLK---AHQPQSGQNT 449
+ + EM++ ++P+ T + + ++ + F E I ++ H + QNT
Sbjct: 720 RIFSEMRDSGIVPDVITYNTFIGSYAADSMF-EEAIGVVRYMIKHGCRPNQNT 771
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 162/375 (43%), Gaps = 49/375 (13%)
Query: 4 LVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSW-------VRNDWEAAFTFFLWAG 56
VD+++ F ++I CG L ++++W +N ++ +
Sbjct: 435 FVDMMKIF--------DEINVCG------LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR---- 112
K++G+ ++T+I+ + F+ A + M P L T T+L + R
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 113 -----YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR--YKNVQDAEHLMFCNK 165
A + GR Y A GL+ +L Y V + ++
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL--- 597
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
K+ +++ C+++ EAER + E+ +RG D+ + + ++S Y + + +
Sbjct: 598 -------KTL-VLVCSKCDLL---PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVG 646
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K + D MK G YN++++ ++ + +++ + KG+ P++++YN++I
Sbjct: 647 KANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQ 342
C+ ++ +A + F EM GI P + TY+ F+ EE G++ M K GC+
Sbjct: 707 YAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 343 PTNDTYIMLIKKFSR 357
P +TY ++ + +
Sbjct: 767 PNQNTYNSIVDGYCK 781
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV-GRAINAF 126
Y +++ ++ +L +E+ G P V +TL+++ C+ D+ A AF
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV----CSKCDLLPEAERAF 617
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFN--IILNGWC 183
K F+ I ++S R + V A E L + + F + ++N + ++
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G S E R E+ +GI D++S++ +I Y + + R+F +M+ GI D
Sbjct: 678 ADFGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDV 734
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN I + A + ++AI +++ M + G PN TYNS++ CK + DEA+ ++
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Query: 304 MLQRGISP 311
+ R + P
Sbjct: 795 L--RNLDP 800
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 12/394 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV EV+ FF WA K+ Y H T Y +I L V ++
Sbjct: 77 LEVLMLKVDHWLVREVMK-TDVGVNVKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQY 135
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W +I EM +VT L +IR + +A+ FY K K + +
Sbjct: 136 GEMWKMIQEMVRNPV--CVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAY 193
Query: 142 QGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
++ L +Y+ V + + M FP +T +++ +++ +C + G A R+ E
Sbjct: 194 NSMIIMLMHEGQYEKVHELYNEMSNEGHCFP-DTVTYSALISAFCKL-GRQDSAIRLLNE 251
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ ++ +I+ + K N+H L LF++M+ D Y +I L K
Sbjct: 252 MKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGR 311
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A + M +G P+ V N++I L KA +LD+A + F+EM P++ TY+
Sbjct: 312 FDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNT 371
Query: 319 FLDIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + E+ E M+ G P+ TY +LI F + + + E+ E
Sbjct: 372 IIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEK 431
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
G P ++Y +LI AL + + AH+ + E+KE
Sbjct: 432 GFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE 465
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 29/365 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ P T + +LI + +++V A+
Sbjct: 226 TVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQP---TAKIYTMLIALFFKLNNVHGALG 282
Query: 125 AF----YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNI 177
F + Y R E +GL A R+ + H M C D +
Sbjct: 283 LFEEMRHQYCRPDVFTYTELIRGLGKA-GRFDEAYNFFHEMRREGCRPD---------TV 332
Query: 178 ILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFD 232
++N N +G + +A +++ EM VV+++ II SK+R + ++ F+
Sbjct: 333 VINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSR-ISEISSWFE 391
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+MK GI Y+ +I K + A+ L++ M+EKG P Y SLI L KA+
Sbjct: 392 RMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 451
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYI 349
+ D A + F E+ + S + R Y + + + G ++ L + M K+GC P Y
Sbjct: 452 RYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYN 511
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ +R + E+G PD +SY +++ L G A + MK+
Sbjct: 512 ALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 571
Query: 410 QLLPE 414
+ P+
Sbjct: 572 AIKPD 576
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 152/361 (42%), Gaps = 21/361 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + + Y +IA+ K+ A L +EMR P + T L IR
Sbjct: 253 KDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTEL---IRGLGKA 309
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
A N F+ +R +++ L + + DA L + C V +
Sbjct: 310 GRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTY 369
Query: 171 NTKSFNIILNGWCNIIGSSREAE-RVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVL 228
NT I+ SR +E W E M GI ++S +I + K K +
Sbjct: 370 NT-----IIKALFE--SKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAM 422
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L ++M G Y ++I AL K + A L + ++E + + Y +IK L
Sbjct: 423 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHL 482
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
KA +LD+A FDEM + G +P + Y+A + + R G +E + M++ GC P
Sbjct: 483 GKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDI 542
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
++Y +++ ++ ++ + + ++ PD SY ++ A+ G EEA + E
Sbjct: 543 NSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKE 602
Query: 406 M 406
M
Sbjct: 603 M 603
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 15/331 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I LGK +FD A+ EMR P V ++ + + + D A+ F
Sbjct: 299 YTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDD---AVKLFE 355
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-----EHLMFCNKDVFPFNTKSFNIILNGW 182
+ + + ++ AL K+ E + PF +++I+++G+
Sbjct: 356 EMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPF---TYSILIDGF 412
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C + +A + EM ++G ++ +I KA+ LF ++K
Sbjct: 413 CKT-NRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+VY +I L K + DA++L M + G PNV YN+L+ L +A LDEA
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M + G P I +Y+ L+ + +TG +L +M++ +P +Y ++ S
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
F K+ E++ G D +Y++++ A+
Sbjct: 592 LFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + +C + S II A+ + K + +F Q+K + + YN++I L
Sbjct: 144 EMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHE 203
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A + +EM G+ PT +
Sbjct: 204 GQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKI 263
Query: 316 YHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + + GL E MR C+P TY LI+ + +F + ++E+
Sbjct: 264 YTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMR 323
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD +I+ L G+L++A + + EM Q +P T
Sbjct: 324 REGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVT 368
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-YNAVIHALAKGRLV 259
+R +D ++ +I C ++ ++ +M R + + + +I L +++
Sbjct: 112 KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMI 171
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHA 318
A+++ ++ + P YNS+I L + ++ + ++EM G P TY A
Sbjct: 172 SKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSA 231
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + G + LL M+ G QPT Y MLI F + ++ E+
Sbjct: 232 LISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY 291
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +YT LI L G+ +EA+ ++ EM+ + P+
Sbjct: 292 CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD 330
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI---RRY 113
K SG + S Y +I K + + A L++EM P +L+ + +RY
Sbjct: 394 KGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 453
Query: 114 CAVHDVGRAI--NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
H++ + + N + R +AV I+ G L N+ D + + C +V+
Sbjct: 454 DIAHELFQELKENCGSSSARV-YAVMIKHL-GKAGRLDDAVNLFDEMNKLGCTPNVY--- 508
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N +++G G EA M + G D+ S++ I++ +K H+ + +
Sbjct: 509 --AYNALMSGLARA-GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEML 565
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
MK+ I+ D YN V+ A++ L ++A LMK M G +++TY+S+++ + K
Sbjct: 566 SNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG------EEVFGLL 333
TY +LI+ L + E + EM++ + + T DIIR + +
Sbjct: 121 TYMALIRCLEVVEQYGEMWKMIQEMVRNPV--CVVTPMELSDIIRMLGNAKMISKAVAIF 178
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFL 392
++ CQPT Y +I Q+ V +++NE+S G+ PD +Y+ALI A
Sbjct: 179 YQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCK 238
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+ + A + EMK+ + P K +L
Sbjct: 239 LGRQDSAIRLLNEMKDNGMQPTAKIYTML 267
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 20/321 (6%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
LI C D+ RA+ FY F I + L+ L + V A LM
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ D++ ++N+++NG C + G +A + + +G D+ +F+ +I Y K R
Sbjct: 422 CSPDIW-----TYNLVVNGLCKM-GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N+ K + + D M GI D YN +++ L K R + + + K+M EKG PN++TYN
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE-----EVFGLLESM 336
LI+ CK RK+ EA + F EM RG++P I T + + GE E+F +E
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
K + + ++I F K+++++ + PD +Y +I + G +
Sbjct: 596 YKF--SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 397 EEAHQYYMEMKEKQLLPEPKT 417
+ AH + +E K L+P T
Sbjct: 654 DLAHTFLLENISKGLVPSFTT 674
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 10/381 (2%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+ V+ + +ND A F + G+ H+ Y MI LG KF+ ++ EMR
Sbjct: 10 VAAVIRY-QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR- 67
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+ S + + + ++R Y V A+N F + ++ + +++ L Y
Sbjct: 68 -KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 154 VQDAEHLMFCNKDV--FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
A + KD+ +P + + I + +C I G A R+ M +G ++ VS+
Sbjct: 127 FSQAHKVYMRMKDIGIYP-DVYTHTIRMKSFC-ITGRPTAALRLLNNMPGQGCEFNAVSY 184
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+IS + K + LFD+M + GI D +N +IH L K V+++ L + +
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--E 328
+GV PN+ T+N I+ LC+ +DEA + + ++ G++P + +Y+ + + + E
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L M G +P TY +I F + N K+ + G PD +Y++LI+
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 389 ALFLNGKLEEAHQYYMEMKEK 409
L +G + A + E EK
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEK 385
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 12/366 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ +I +L K + L ++ P+L T + + R A+
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKS 174
+ R + + + + + L+ C++ + +AE H M N V P N +
Sbjct: 269 EAARLLESIVSEG---LTPDVISYNTLICGFCKHSKLVEAECYLHKMV-NSGVEP-NEFT 323
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N I+NG+C G + A+++ + +G D ++S +I+ ++++ + +F +
Sbjct: 324 YNTIINGFCKA-GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G + +YN ++ L+K LV A+ LMK M E G +P++ TYN ++ LCK L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A ++ + +G P I T++ +D R ++ +L++M G P TY L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + R+ NV + + E G P+ +Y LI + + K+ EA + + EMK + L
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 412 LPEPKT 417
P+ T
Sbjct: 563 TPDIVT 568
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 148/362 (40%), Gaps = 61/362 (16%)
Query: 113 YCAVHDVGRAINAFY-------AYKRFK------FAVGIEDFQGLLSALCRYKNVQDAEH 159
YCAV I+ FY AY F I F L+ LC+ NVQ++E
Sbjct: 184 YCAV------ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 160 LM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L + V P N +FNI + G C G+ EA R+ + G+ DV+S++ +I
Sbjct: 238 LFSKVMKRGVCP-NLFTFNIFIQGLCRK-GAIDEAARLLESIVSEGLTPDVISYNTLICG 295
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K L + +M G+E + YN +I+ K ++++A +++ KG P+
Sbjct: 296 FCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD 355
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDE---------------------------------- 303
TY+SLI LC ++ A F E
Sbjct: 356 EFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 304 -MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M++ G SP I TY+ ++ + + G + G+L GC P T+ LI + + R
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQR 475
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
++ + + +G PD +Y L++ L KL+ + M EK P T
Sbjct: 476 NMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 420 LL 421
+L
Sbjct: 536 IL 537
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K+ A ++++ P + T TL I YC ++ +AI
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL---IDGYCKQRNMDKAIEILD 485
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYK---NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + LL+ LC+ + NV D M K P N ++NI++ +C
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML-EKGCTP-NIITYNILIESFCK 543
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDR 243
S EA ++ EM RG+ D+V+ +I L K LF + K
Sbjct: 544 DRKVS-EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
++N +I+A V A L M AP+ TY +I CK +D A E
Sbjct: 603 AIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662
Query: 304 MLQRGISPTIRTYHAFLDII 323
+ +G+ P+ T L+ +
Sbjct: 663 NISKGLVPSFTTCGKVLNCL 682
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 8/247 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+I K R D A ++D M P ++T TLL C + ++ F
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL---NGLCKARKLDNVVDTFK 520
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A I + L+ + C+ + V +A L + + P + + ++ G C+
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP-DIVTLCTLICGLCSN 579
Query: 186 IGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +A +++ + + Y F+ +I+ + N+ +LF +M D
Sbjct: 580 -GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNY 638
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I + K + A + + KG+ P+ T ++ LC +L EA + M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698
Query: 305 LQRGISP 311
+Q GI P
Sbjct: 699 VQNGIVP 705
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 11/320 (3%)
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T IL+ D+ + F K + + +++A CR N++ A ++
Sbjct: 246 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVL 305
Query: 162 F-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
C + N +++ +++NG+C I G AE + +M +G+ + + F+ +I Y +
Sbjct: 306 DECVGNGVEPNERTYGVLINGFCKI-GQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCR 364
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ L++ M++MG+E D YN + L + + +A +L+ M E GV PN VT
Sbjct: 365 KGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVT 424
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLE 334
Y +LI CK + EAR+ F EM ++G +P++ TY+ +D IR E +
Sbjct: 425 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER---FRK 481
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K G P TY L+ + K++ E+ + G P+ +YTALI L G
Sbjct: 482 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 541
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
+ E A Q Y +M + L+P+
Sbjct: 542 RSEAAFQLYDDMLKAGLIPD 561
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + R Y +I K+ + + A L+ +M+G G + + T+ I YC
Sbjct: 311 NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM---IDGYCRKGM 367
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V A+ A ++ + I + L LCR + +A+ L+ V P N ++
Sbjct: 368 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP-NYVTYT 426
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G EA R++ EM+++G VV+++ +I Y+K ++ + R +M++
Sbjct: 427 TLISIHCKD-GDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEK 485
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D Y +++H V A+ L + M+++G PNVV Y +LI L K + +
Sbjct: 486 KGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEA 545
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D+ML+ G+ P Y A + + T
Sbjct: 546 AFQLYDDMLKAGLIPDDSLYSALVGSLHT 574
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C V P + +++++G C G +A R+ +M + G+ + + ++ ++ CY + +
Sbjct: 171 CPGSVSPL---AASVVVDGLCKS-GRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 226
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ +V + + M+ GIE Y ++ +L+ R + +L M+ V +V Y
Sbjct: 227 DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYT 286
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--------------------- 321
++I C+A + A + DE + G+ P RTY ++
Sbjct: 287 AVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 346
Query: 322 ------II---------RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
II R G ++ + +M KMG + TY L R +
Sbjct: 347 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+ + + E G P+ +YT LI +G + EA + + EM EK P T ++ D
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMID- 465
Query: 425 SYNKQFVERQ 434
Y K+ R+
Sbjct: 466 GYTKKGSIRE 475
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVT---YNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
GRL A L +++ G P V+ + ++ LCK+ ++D+AR+ D+M + G+S
Sbjct: 155 GRLADAAGLLERAL---GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLN 211
Query: 313 IRTYHAFLDI-IRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
Y++ LD +R ++ V +LE M G + T TY +L+ S R V ++N
Sbjct: 212 ALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFN 271
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ N D YTA+I+A G + A + E + P +T
Sbjct: 272 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERT 319
>gi|326513966|dbj|BAJ92133.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 182/397 (45%), Gaps = 19/397 (4%)
Query: 15 RSEMRNKIEECGIK-VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
R+ + + G+ +S E++S+V+S A WA + S + + ++
Sbjct: 86 RAALHRALSSTGLDALSPEVLSDVVSRGNLSGSATVDLLDWAICSAKLRPSVQTCNIVVR 145
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
LG+ + F + ++ MR P L T Q I++ A V +A+ + +
Sbjct: 146 ALGRRKFFTSVEPALEVMRKNGVFPDLTTLQ---IIMDTLVAARQVNKAVQML---ESDQ 199
Query: 134 FAVGIED-------FQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCNI 185
F +GIE F L+ LCR +V A L+ + F + + +N +L GW
Sbjct: 200 FGIGIEKTCHRKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARF 259
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + + W M + G+ D VS +I +A + LR+F++M + G
Sbjct: 260 -GRVDKLQHFWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMA 318
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA++ + +I K M + PN TY +I+ L K R++ +A Q FD+ML
Sbjct: 319 YNALVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDML 378
Query: 306 QRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G+ P +F++ + T G L+ + RK GC + TY +L+++ +R+ + G
Sbjct: 379 AQGVLPDTGIITSFIEPLCTFGPPHAALMIYQKSRKAGCTISLKTYKLLLERLARFGKSG 438
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
V +W E+ E+G D+ Y +++ L GK++ A
Sbjct: 439 TVLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKVDAA 475
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 151 YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM-EMSQRGI----- 204
+ +V+ A +M N VFP + + II++ ++ + + + V M E Q GI
Sbjct: 153 FTSVEPALEVMRKN-GVFP-DLTTLQIIMD---TLVAARQVNKAVQMLESDQFGIGIEKT 207
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
C+ +FS +I C + ++ L + D++VYN V+ A+ V
Sbjct: 208 CHRKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARFGRVDKLQH 267
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
M E G+ P+ V++ LI+ L +A + +EA + F++M+Q G PT Y+A + + I
Sbjct: 268 FWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMAYNALVFNFI 327
Query: 324 RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G+ + M C P +DTY +I+ + R+ + ++++++ G PD
Sbjct: 328 SVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGVLPDTG 387
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
T+ I L G A Y + ++ KT +LL
Sbjct: 388 IITSFIEPLCTFGPPHAALMIYQKSRKAGCTISLKTYKLL 427
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/229 (17%), Positives = 96/229 (41%), Gaps = 7/229 (3%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + + A + ++M GP+ + L+ + +V D+ R+I +
Sbjct: 287 LIEALGRAGQAEEALRVFEKMVQEGYGPTTMAYNALVF---NFISVGDLDRSIKYYKDMV 343
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGS 188
+ + ++ AL + + V DA + + V P +T + C G
Sbjct: 344 DNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLAQGVLP-DTGIITSFIEPLCTF-GP 401
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
A ++ + + G + ++ ++ ++ VL ++++M+ G D+++Y
Sbjct: 402 PHAALMIYQKSRKAGCTISLKTYKLLLERLARFGKSGTVLNIWEEMQESGYPSDKEIYEF 461
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+++ L V A+ +++ KG V Y+ L L + K++ A
Sbjct: 462 IVNGLCNVGKVDAAVFVVEESLRKGFCLGRVVYSKLNDRLLEMDKVETA 510
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 170/365 (46%), Gaps = 23/365 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + ++ ++ + F+ W +E + ++ + I+I+ C ++
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI----KVVLDVYSFGIVIKGCCEAGEI 179
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
++ + + F F+ + + L+ C+ ++ A KD+F F F ++
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA-------KDLF-FEMGKFGLVA 231
Query: 180 NGWCNII--------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
N W + G ++ ++ +M + G+ ++ +++C+++ K ++F
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M+ G+ C+ YN +I L + +A +M M+ + PN++TYN+LI C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTY 348
KL +A ++ RG+SP++ TY+ + R G+ +++ M + G +P+ TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI F+R ++ + + E G PD +Y+ LIH + G++ EA + + M E
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 409 KQLLP 413
K L P
Sbjct: 472 KMLEP 476
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC 183
F+ + K + + F ++ C ++ + L+ ++ F N + +++G C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +A+ ++ EM + G+ + +++ +I K + ++++M+ G+ +
Sbjct: 210 KK-GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN V++ L K KDA + M E+GV+ N+VTYN+LI LC+ K +EA + D+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328
Query: 304 MLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M I+P + TY+ +D G+ + L ++ G P+ TY +L+ F R
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
K+ E+ E G P + +YT LI + +E A Q M+E L+P+ T +
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSV 448
Query: 421 L 421
L
Sbjct: 449 L 449
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 9/369 (2%)
Query: 60 GYAHSTREYHTMIAILGKVR-KFDTAWALIDEMRGGETGPSLVTKQTLL-ILIRRYCAVH 117
G +S + + I GK++ +F T+ +L+ + ET TK L ++I Y
Sbjct: 52 GNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSK---TKSRLYEVIINAYVQSQ 108
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ +I F F G F LL+ + + +K + SF I
Sbjct: 109 SLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGI 168
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G C G ++ + +E+ + G +VV ++ +I K + K LF +M +
Sbjct: 169 VIKGCCEA-GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + Y +IH L K + K + + M+E GV PN+ TYN ++ LCK + +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ FDEM +RG+S I TY+ + + E +++ M+ P TY LI
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDG 347
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + G + ++ G P +Y L+ G A + EM+E+ + P
Sbjct: 348 FCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 415 PKTDELLQD 423
T +L D
Sbjct: 408 KVTYTILID 416
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAIL 75
EM K++E G+ + + V++ + D F ++ ++ G + + Y+T+I L
Sbjct: 254 EMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ K + A ++D+M+ P+L+T TL I +C+V +G+A++ K +
Sbjct: 314 CREMKANEANKVMDQMKSYVINPNLITYNTL---IDGFCSVGKLGKALSLCRDLKSRGLS 370
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ + L+S CR + A ++ + + P + ++ I+++ + + A
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP-SKVTYTILIDTFARS-DNMETAI 428
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ M + G+ DV ++S +I + +++ RLF M +E + +YN +I
Sbjct: 429 QLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGY 488
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
K A+ L + MEEK +APNV +Y+ LI+ LCK RKL EA ++M+ GI P+
Sbjct: 489 CKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWA--LIDEMRGGETGPSLVTKQTLLILIRRYC 114
K G + S Y+ +++ G RK DT+ A ++ EM PS K T ILI +
Sbjct: 365 KSRGLSPSLVTYNVLVS--GFCRKGDTSGAAKMVKEMEERGIKPS---KVTYTILIDTFA 419
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
++ AI + + + + L+ C + +A L K + P N
Sbjct: 420 RSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEP-NE 478
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+N ++ G+C GSS A R++ +M ++ + +V S+S +I K R L + L +
Sbjct: 479 VIYNTMILGYCKE-GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVE 537
Query: 233 QMKRMGIECDRKVYNAVIHA 252
+M GI+ + N + A
Sbjct: 538 KMIDSGIDPSDTICNLISRA 557
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ +++ +LS + + A ++A ++ ++ + Y+ M+ + + +F L+D
Sbjct: 162 NARMLATILSVLGKANQEALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLD 221
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R I + L+SA
Sbjct: 222 LMRSRGCEPDLVSFNTL-INARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS 280
Query: 150 RYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + C D++ +N I + G C G SREA R++ ++ +G
Sbjct: 281 RESNLEEAVKVYNDMVAHRCQPDLWTYNAM---ISVYGRC---GMSREAGRLFKDLESKG 334
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+++ ++ +++ N+ KV + + M +MG D YN +IH K A
Sbjct: 335 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 394
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L M+ G +P+ VTY LI L KA + EA + EML + PT+RT+ A +
Sbjct: 395 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 454
Query: 323 IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ V + M + G +P + Y +++ R+ + G K++ E+ + PD
Sbjct: 455 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDH 514
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ Y ++ L + E+ H+ +M+E
Sbjct: 515 ALYEVMLRVLGKENREEDVHKVVKDMEE 542
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISLMKS 268
++ ++ Y++ KV L D M+ G E D +N +I+A L G +V + AI L+
Sbjct: 200 YNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNE 259
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG- 326
+ G+ P+++TYN+LI + L+EA + +++M+ P + TY+A + + R G
Sbjct: 260 VRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGM 319
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E L + + G P TY L+ F+R V ++ ++ + G G D +Y
Sbjct: 320 SREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNT 379
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+IH G+ + A Q Y +MK P+ T +L D
Sbjct: 380 IIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLID 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 158/391 (40%), Gaps = 88/391 (22%)
Query: 37 VLSWV-RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
V+ WV ++ W+ A + W + Y+ + R T++++LGK + A
Sbjct: 134 VVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALA----------- 182
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
+ I R A + + NA G+ + R+ VQ
Sbjct: 183 ----------VEIFARAEAASGNTVQVYNAM---------------MGVYARTGRFTKVQ 217
Query: 156 DAEHLM---FCNKDVFPFNT------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+ LM C D+ FNT KS ++ N ++ E+ + GI
Sbjct: 218 ELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLN----------EVRRSGIQP 267
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D+++++ +IS S+ NL + +++++ M + D YNA+I + + ++A L
Sbjct: 268 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 327
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
K +E KG P+ VTYNSL+ + +D+ ++
Sbjct: 328 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE--------------------------- 360
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ E M KMG TY +I + + Q F++++++ +G PD +YT L
Sbjct: 361 -----ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 415
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
I +L ++EA + EM ++ P +T
Sbjct: 416 IDSLGKANMIKEAAEVMSEMLNARVKPTLRT 446
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 164/429 (38%), Gaps = 71/429 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y+T+I + GK + D A+ L +M+ P VT
Sbjct: 369 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVT----------------- 411
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ L+ +L + +++A +M N V P ++F+
Sbjct: 412 ---------------------YTVLIDSLGKANMIKEAAEVMSEMLNARVKP-TLRTFSA 449
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G+ G EAE + M + GI D +++S ++ + K ++L+ +M
Sbjct: 450 LICGYAKA-GKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLH 508
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC-------- 289
+ D +Y ++ L K +D ++K MEE + V + L+K C
Sbjct: 509 SFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANML 568
Query: 290 -----KARKLDEARQA------------FDEMLQRGISPTIRTYHAFLDIIRTG---EEV 329
+ +LD+ +A F+ +L + YH + + R +
Sbjct: 569 RLAISQGCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKA 628
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
LL M++ G +PT T +L+ +S Q KV + + G Y+++I A
Sbjct: 629 EKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 688
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS-GQN 448
NG A Q MEMK+ L P+ + + Q I LKA +
Sbjct: 689 YLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLP 748
Query: 449 TRVISKKSD 457
R++++KSD
Sbjct: 749 IRLLTEKSD 757
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 185/397 (46%), Gaps = 19/397 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV EVL + + FF WAGK+ + H Y +I L F
Sbjct: 53 LEVLKLKVDHRLVREVLK-IDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLF 111
Query: 82 DTAWALIDEMRGGET---GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
W +I EM T GP+ +++ +++ V +A++ FY K K
Sbjct: 112 GEMWKMIQEMVRSPTCVIGPADLSE-----VVKILGKAKMVNKALSVFYQIKSRKCKPTA 166
Query: 139 EDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ ++ L + ++ + + H M D FP +T +++++++ + + G A R+
Sbjct: 167 STYNSMILMLMQEGHHEKIHELYHEMCNEGDCFP-DTMTYSVLVSAFVKL-GRDDYAIRL 224
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G+ ++ +++ Y K+ + K L L +MK G Y +I L K
Sbjct: 225 FDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGK 283
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
V+DA S+ +M + G P+VV N+LI KA +L++A + FD+M +P + T
Sbjct: 284 SGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVT 343
Query: 316 YH----AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y+ A + E E M+ G P++ TY +LI F + + + E+
Sbjct: 344 YNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEM 403
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
E G P ++Y +LI+AL + E A++ ++E+KE
Sbjct: 404 DEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE 440
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 26/363 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +++ K+ + D A L DEM+ P+ TLL + Y D +A+
Sbjct: 202 TMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAI---YFKSGD-EKALG 257
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
K A + + L+ L + V+DA + C DV ++
Sbjct: 258 LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDV---------VL 308
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQM 234
+N NI G + +A +++ +M +VV+++ +I + + + F++M
Sbjct: 309 INNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKM 368
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K G+ Y+ +I K V+ A+ L++ M+EKG P Y SLI L KA++
Sbjct: 369 KANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 428
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+ A + F E+ + + R Y + ++ + G E L M+K+GC P Y L
Sbjct: 429 EAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNAL 488
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ R F + ENG PD +S+ +++ L G+ E+A + +M+MK+ +
Sbjct: 489 MSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLI 548
Query: 412 LPE 414
P+
Sbjct: 549 KPD 551
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 21/385 (5%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S LVS + R+D+ A F K +G + + Y T++AI K + A L+ E
Sbjct: 206 SVLVSAFVKLGRDDY--AIRLFDEM-KANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQE 261
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
M+ P++ T L+ + + V D A + F + + L++ +
Sbjct: 262 MKDKGCAPTVFTYTELIKGLGKSGRVED---AYSVFLNMLKDGCKPDVVLINNLINIFGK 318
Query: 151 YKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
++DA L + C +V +NT ++ + EA + +M G+
Sbjct: 319 AGRLEDALKLFDQMRSLKCAPNVVTYNT-----VIKALFESKAPASEAASWFEKMKANGV 373
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
++S +I + K + K L L ++M G Y ++I+AL K + + A
Sbjct: 374 TPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 433
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
L ++E + Y +IK L K + EA F+EM + G +P + Y+A + ++
Sbjct: 434 LFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLV 493
Query: 324 RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R G EE F L +M + GC P +++ +++ +R + +++ ++ ++ PD
Sbjct: 494 RAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAV 553
Query: 382 SYTALIHALFLNGKLEEAHQYYMEM 406
SY ++ +L +G EEA + EM
Sbjct: 554 SYNTILGSLSRSGMFEEAAKLMREM 578
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 183 CNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + G E ++ EM + C S ++ KA+ ++K L +F Q+K +
Sbjct: 108 CGLFG---EMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKP 164
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQA 300
YN++I L + + L M +G P+ +TY+ L+ K + D A +
Sbjct: 165 TASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRL 224
Query: 301 FDEMLQRGISPTIRTYHAFLDI-IRTGEE-VFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
FDEM G+ PT + Y L I ++G+E GL++ M+ GC PT TY LIK +
Sbjct: 225 FDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKS 284
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + V+ + ++G PD LI+ G+LE+A + + +M+ + P
Sbjct: 285 GRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAP 339
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 146/321 (45%), Gaps = 18/321 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A++ FL K G + +I I GK + + A L D+MR + P++VT T
Sbjct: 288 EDAYSVFLNMLKD-GCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNT 346
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
++ + + + A + F K + L+ C+ V+ A L+
Sbjct: 347 VIKAL--FESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLE--- 401
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYS 219
+ K F +C++I + +A+R +++E+ + ++ +I
Sbjct: 402 ---EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLG 458
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K + + LF++MK++G D YNA++ L + ++++A S +++MEE G P++
Sbjct: 459 KCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLN 518
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESM 336
++N ++ L + + ++A + F +M I P +Y+ L + R+G EE L+ M
Sbjct: 519 SHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREM 578
Query: 337 RKMGCQPTNDTYIMLIKKFSR 357
G + + TY +++ +
Sbjct: 579 GSRGFEYDHITYSSILEAVGK 599
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 7/325 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-C 163
TL ILI +C ++ +G A + + + F L+ LC + +A L
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+ F + ++ ++NG C + G++ A R M QR VV +S II K R
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKV-GNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L + L LF M GI + Y+++IH L K+AI L +M + + P+ +T+N+
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRT--GEEVFGLLESMRKM 339
L+ LCK + +A D M+Q + P + TY++ +D +R+ G+ V + ++M +
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV-NVFDTMVRK 328
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
GC P+ +Y LI + + + ++ E+S+ G PD +Y LIH L G+L +A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDW 424
+ EM +P+ T +L D+
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDY 413
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 163/375 (43%), Gaps = 10/375 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + +Q + Y T+I L K R+ A +L +M P+ T +L I
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL---IH 237
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C + AI FYA K F L+ ALC+ V A +++ D+ P
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP 297
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++N +++G C + + V+ M ++G V+S++ +I+ Y K + + K +
Sbjct: 298 -DVVTYNSLMDGHC-LRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMG 355
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF++M + G+ D YN +IH L ++DAI+L M G P++VTY L LC
Sbjct: 356 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 415
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K +L EA + + P I Y +D + R G E L + G P
Sbjct: 416 KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 475
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++I + K++ E+ ENG P+ +Y + N + A Q + EM
Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535
Query: 407 KEKQLLPEPKTDELL 421
+ + T LL
Sbjct: 536 LSRGFSIDVSTTTLL 550
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 169/402 (42%), Gaps = 45/402 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY ST + T+I L K A L D+M G P ++T T LI C V +
Sbjct: 119 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT---LINGLCKVGNT 175
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI + ++ + + ++ +LC+ + + +A L K + P N +++
Sbjct: 176 STAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP-NNFTYSS 234
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA---------------- 221
+++G C I+G +EA R++ M R I D ++F+ ++ K
Sbjct: 235 LIHGLC-ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 222 -------------------RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
+ K + +FD M R G Y +I+ K +++ A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L + M ++G+ P+ VTYN+LI LC +L +A F EM+ G P + TY D
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 323 IRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ E LL+ + P Y +++ R + +++++S G PD
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+YT +I+ L G L EA + + EM E P T L+
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLI 515
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 7/304 (2%)
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF--PFNTK 173
V+ + A++ F R + I DF LL+++ R K+ L + D F P NT
Sbjct: 32 VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSL-YKQMDSFGIPHNTY 90
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ NI++N +C+ + A V ++ + G +F+ +I + + L+LFD+
Sbjct: 91 TLNILINSFCH-LNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + D Y +I+ L K AI ++SME++ P VV Y+++I LCK R+
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
L EA F +ML +GISP TY + L I+ +E L +M P T+
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ + V + + ++ PD +Y +L+ L ++ + + M K
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 411 LLPE 414
+P
Sbjct: 330 CVPS 333
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+V FS +++ ++ ++ VL L+ QM GI + N +I++ + A S++
Sbjct: 54 IVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLG 113
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G P+ T+ +LI+ LC K+ EA Q FD+M G P + TY ++ + + G
Sbjct: 114 DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVG 173
Query: 327 EEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ L SM + C+PT Y +I + RQ +++++ G P+ +Y+
Sbjct: 174 NTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYS 233
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+LIH L + G +EA + + M ++++P+ T L D
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 140/335 (41%), Gaps = 47/335 (14%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
W+ A F +A ++T++ L K A ++D M + P +VT
Sbjct: 245 WKEAIRLF-YAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYN 303
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
+L+ +C ++G+ +N F R + + L++ C+ + + A L
Sbjct: 304 SLM---DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM 360
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF----------- 211
+ + P +T ++N +++G C++ G R+A ++ EM G D+V++
Sbjct: 361 SQQGLIP-DTVTYNTLIHGLCHV-GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 418
Query: 212 ------------------------SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
S ++ +A L LF ++ G+ D + Y
Sbjct: 419 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 478
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I+ L + L+ +A L M+E G +PN TYN + + + + A Q F EML R
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538
Query: 308 GISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
G S + T ++++ GL +S++++ C+
Sbjct: 539 GFSIDVSTTTLLVEMLSDD----GLDQSVKQILCE 569
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 19/381 (4%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM 91
+LV +V+ + D A+ F WAGKQS + H+ + ++++ K R+ + A
Sbjct: 70 DLVGKVIHRI-PDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSH 128
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
P V+ TL+ + DV +A+ F K AV + +L LC
Sbjct: 129 MKNVFEPDEVSYNTLM---NGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSG 184
Query: 152 KNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER---VWMEMSQRGICYDV 208
+ A + +F N S+ I+++G C SR+ ++ ++ +M + I DV
Sbjct: 185 GKISMAWEVFKDMSGIFSPNLISYTIMIDGLCK----SRKVDKAITLFKQMVDKAIYPDV 240
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V++ +I K R + + LF++ + G YN +I L K +++A++L
Sbjct: 241 VTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDD 300
Query: 269 M-EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M E + P++ TY++LI L + + ++A + ++EML G SP + TY+ LD + ++G
Sbjct: 301 MVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG 360
Query: 327 EEVFGLLESMRKMG----CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E + E RKMG C P TY +LI +F + + G+ K+ E+ PD +
Sbjct: 361 CEDKAM-EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVT 419
Query: 383 YTALIHALFLNGKLEEAHQYY 403
+T +I L +++EAH+ +
Sbjct: 420 FTTVIQKLCKESRIDEAHELF 440
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D VS++ +++ + KA ++ K L LF +MK GI R +N V+ L G + A +
Sbjct: 136 DEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRS-HNIVLRGLCSGGKISMAWEVF 194
Query: 267 KSMEEKGV-APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
K M G+ +PN+++Y +I LCK+RK+D+A F +M+ + I P + TY A +D +
Sbjct: 195 KDMS--GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGPDRS 381
R +E + L E R GC PT TY +I + + N ++++ + E PD
Sbjct: 253 QRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF 312
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y+ALI+ L L+ + E+A++ Y EM + P+ T L D
Sbjct: 313 TYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLD 354
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 149/328 (45%), Gaps = 29/328 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI L K RK D A L +M P +VT L + +G+
Sbjct: 208 YTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGAL---------IDGLGKQRRVKE 258
Query: 128 AYKRFKFAVG------IEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNII 178
AY F+ A + + ++ LC+ +++A L M + P + +++ +
Sbjct: 259 AYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKP-DMFTYSAL 317
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+NG N+ +A ++ EM G DVV+++ ++ K+ K + +F +M +G
Sbjct: 318 INGL-NLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG-VG 375
Query: 239 IECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
CD V Y +I K + DA+ L K ME + + P+ VT+ ++I+ LCK ++DE
Sbjct: 376 NVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDE 435
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A + F E + + P ++ L I R ++ L + M GC PT TY L+
Sbjct: 436 AHELF-ESIGKTCKPDSVLFNTMLAGYCKITRI-DDAKKLHDRMLDSGCAPTLATYTALV 493
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDR 380
F R ++ + +++E+ E G P+R
Sbjct: 494 TGFCRTGRYSDALIMYHEMIEMGFPPER 521
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 145/281 (51%), Gaps = 11/281 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEM 199
L++ LCR +V A ++ +F + +FN ++NG C I G +EA ++ EM
Sbjct: 133 LINCLCRLNHVVFAISVL---GKMFKLGIQPDAITFNTLINGRC-IEGEIKEAVGLFNEM 188
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+RG DV+S+S +I+ K+ N L+L +M+ G + + Y +I +L K LV
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
DA+ L+ M ++G+ P+VVTY++++ C L+EA F+EM+ R + P T+
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308
Query: 320 LD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+D + + G E + E+M K G +P TY L+ + Q KV + + + G
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P SY LI+ +L+EA +EM EK+L P+ T
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 14/335 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G Y T++ + + A L +EM G P+ VT IL+ C V
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVT---FTILVDGLCKEGMV 318
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F A + + L+ C + +A+ ++ +K P S+NI
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV-VHSYNI 377
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++NG+C R EA+ + +EMS++ + D V++S ++ + + L LF +M
Sbjct: 378 LINGYCK---RRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D Y+ ++ L K + +A+ L+KSM+E + P++V YN LI+ + A KL+
Sbjct: 435 SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLE 494
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
A++ F ++ GI PTIRTY + +++ G +E + L M G P + +Y ++I
Sbjct: 495 VAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ F + + ++ +E+ D S++ L+
Sbjct: 555 QGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 18/359 (5%)
Query: 68 YHTMI---AILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
++T+I I G++++ A L +EM RG + P +++ T+ I C + A
Sbjct: 165 FNTLINGRCIEGEIKE---AVGLFNEMVRRGHQ--PDVISYSTV---INGLCKSGNTSMA 216
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFNIILNG 181
+ + + + ++ +LC+ V DA L+ D P + +++ IL+G
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C++ G EA ++ EM R + + V+F+ ++ K + + +F+ M + G E
Sbjct: 277 FCSL-GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YNA++ + +A ++ M +KG AP V +YN LI CK R+LDEA+
Sbjct: 336 NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL 395
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
EM ++ ++P TY + + + G +E L + M G P TY L+ +
Sbjct: 396 VEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKH 455
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+ + E+ PD Y LI +F+ GKLE A + + ++ + P +T
Sbjct: 456 GHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRT 514
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 18/384 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y T+I L K + A L+ EM P +VT T+L +C++
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL---HGFCSL 280
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A F F L+ LC+ V +A + K P N +
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP-NAYT 339
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +++G+C + EA++V M +G V S++ +I+ Y K R L + L +M
Sbjct: 340 YNALMDGYC-LNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ D Y+ ++ L + ++A++L K M G+ P+++TY++L+ LCK L
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDT 347
DEA + M + I P I Y +I+ G + G LE +++ G QPT T
Sbjct: 459 DEALKLLKSMQESKIEPDIVLY----NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRT 514
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y ++IK + ++++ ++ ++G P+ SY +I N A + EM
Sbjct: 515 YTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Query: 408 EKQLLPEPKTDELLQDWSYNKQFV 431
K+ + T ++L D + +
Sbjct: 575 GKRFSADSSTFQMLLDLESRDEII 598
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F + +K + V+ L +QM G+ + N +I+ L + V AIS++
Sbjct: 92 VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLG 151
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M + G+ P+ +T+N+LI C ++ EA F+EM++RG P + +Y ++ + ++G
Sbjct: 152 KMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSG 211
Query: 327 EEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
LL M + GC+P Y +I + + + +E+ + G PD +Y+
Sbjct: 212 NTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYS 271
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++H G L EA + EM + ++P T +L D
Sbjct: 272 TILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M G+ ++V S + +I+C + ++ + + +M ++GI+ D +N +I+
Sbjct: 117 QMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEG 176
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K+A+ L M +G P+V++Y+++I LCK+ A Q +M ++G P + Y
Sbjct: 177 EIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYT 236
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + + LL M G P TY ++ F ++NE+
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER 433
P+ ++T L+ L G + EA + M +K P T + L+ + N Q E
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356
Query: 434 Q 434
Q
Sbjct: 357 Q 357
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 184/378 (48%), Gaps = 19/378 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTK 103
E A+ F + Q G Y ++I LGK + D A+ L ++M G P + T
Sbjct: 440 EEAYKIF-ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLM 161
LIR + +H GR + +K D L + + C +K + + ++
Sbjct: 499 -----LIRNF-FIH--GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550
Query: 162 FCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F + + F + +S++I+++G G +RE ++ M Q+G D +++ ++ +
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKA-GQARETSNIFHAMKQQGFALDARAYNAVVDGFC 609
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K+ +HK + ++MK ++ Y A++ LAK + +A L + + KG+ NVV
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESM 336
Y+SLI K ++DEA +EM+++G++P + T+++ LD + EE+ L +SM
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
++M C P TY +LI R +++ F W ++ + G P+ +YT +I L G +
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 789
Query: 397 EEAHQYYMEMKEKQLLPE 414
+A+ + K +P+
Sbjct: 790 TDAYSLFERFKANGGIPD 807
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 13/371 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + T++ L + + A AL+DE++G P +V + I +
Sbjct: 206 QEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN---VCIDCFGKA 262
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
+V A F+ K + ++ LC+ + +AE L M + V P
Sbjct: 263 GNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PC-AY 320
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N ++ G+ + G +A ++ + +RG VVSF+ I++C K R + + L LF+
Sbjct: 321 AYNTMIMGYGSA-GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 379
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ E + YN +I L G V++A ++ ME + PN++T N ++ LCKARK
Sbjct: 380 MKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
L+EA + F+ QRG +P TY + +D + + G +E + L E M G Y
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI+ F + + K++ E+ G PD + + +F G++E+ + +++
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558
Query: 411 LLPEPKTDELL 421
LP+ ++ +L
Sbjct: 559 FLPDVRSYSIL 569
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 26/382 (6%)
Query: 37 VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
VL ++ +D AA L GY + + A L + R+ D A + MR +
Sbjct: 117 VLPFLHHDL-AALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKF 175
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
P+ +LI RA+ + + VG+ F L+ AL R V D
Sbjct: 176 RPAF---SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 232
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWC-NIIGSSREAERVWM---EMSQRGICYDVVSFS 212
A L+ D + +I+L C + G + + W E+ +G+ D VS++
Sbjct: 233 ALALV----DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYT 288
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-----YNAVIHALAKGRLVKDAISLMK 267
+I KA L + LF QM E +R V YN +I +DA L++
Sbjct: 289 SMIWVLCKAGRLGEAEELFAQM-----EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 343
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG- 326
+ E+G P+VV++NS++ L K RK+DEA F E++++ P TY+ +D++ G
Sbjct: 344 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGG 402
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE + +L+ M P T +++ + + R+ +K++ S+ G PD +Y
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462
Query: 385 ALIHALFLNGKLEEAHQYYMEM 406
+LI L G+++EA++ + +M
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKM 484
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 15/368 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G Y +MI +L K + A L +M + P T+++
Sbjct: 276 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM------GY 329
Query: 117 HDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT 172
GR +A+ +R + + F +L+ L + + V +A L KD P N+
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NS 388
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++NII++ C + G EA R+ EM + ++++ + ++ KAR L + ++F+
Sbjct: 389 STYNIIIDMLC-LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ G D Y ++I L K V +A L + M + G N V Y SLI+
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYI 349
+ ++ + F E+++RG P + + ++D + + GE G + E +R G P +Y
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI ++ Q +++ + + G D +Y A++ +GK+ +A++ EMKEK
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627
Query: 410 QLLPEPKT 417
+ P T
Sbjct: 628 CVQPTVAT 635
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 175 FNIILNGWCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
F + + +IG+ EA R + +M + G V F+ ++ ++ + L
Sbjct: 175 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 234
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D++K +E D +YN I K V A ++ +G+ P+ V+Y S+I L
Sbjct: 235 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVL 294
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMRKMGCQP 343
CKA +L EA + F +M P Y+ I+ G E+ + LLE +R+ GC P
Sbjct: 295 CKAGRLGEAEELFAQMEAERSVPCAYAYNTM--IMGYGSAGRFEDAYKLLERLRERGCIP 352
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ ++ ++ + R+ ++ E+ + P+ S+Y +I L L G++EEA++
Sbjct: 353 SVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 411
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM+ L P T ++ D
Sbjct: 412 DEMEHASLFPNLLTVNIMVD 431
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 178/409 (43%), Gaps = 51/409 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G +F+ A+ L++ +R PS+V+ ++L + + V A++ F
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK---RKVDEALSLFE 378
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K+ + ++ LC V++A ++ + +FP N + NI+++ C
Sbjct: 379 VMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP-NLLTVNIMVDRLCKA 436
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +++ SQRG D V++ +I K + + RLF++M G + V
Sbjct: 437 -RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495
Query: 246 YNAVI------------HALAKG---RLVKDAISLMKS--------------------ME 270
Y ++I H + K R K ++L+ + +
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-- 327
G P+V +Y+ LI L KA + E F M Q+G + R Y+A +D ++G+
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + +LE M++ QPT TY ++ ++ + + ++ E G + Y++LI
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNKQFV 431
G+++EA+ EM +K L P T D L++ N+ V
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 724
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 140/330 (42%), Gaps = 52/330 (15%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A KQ G+A R Y+ ++ K K A+ +++EM+ P++ T Y
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT----------YG 637
Query: 115 AVHD----VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
A+ D + R A+ ++ K + GIE
Sbjct: 638 AIVDGLAKIDRLDEAYMLFEEAK-SKGIE------------------------------L 666
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ +++G+ + G EA + EM ++G+ +V +++ ++ KA +++ L
Sbjct: 667 NVVLYSSLIDGFGKV-GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 725
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F MK M + Y+ +I+ L + + A + M+++G+ PNVVTY ++I L K
Sbjct: 726 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 785
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
+ +A F+ G P +++A ++ + E + + E R GC+ +
Sbjct: 786 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKS 845
Query: 348 YIMLIKKFSR---WRQFGNVFKVWNEISEN 374
I L+ ++ Q V V EI+++
Sbjct: 846 CISLLDALNKSECLEQAAIVGAVLREIAKS 875
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 186/381 (48%), Gaps = 19/381 (4%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSL 100
N E A F A ++ G ++ Y ++I LGK K D A+ L ++M G + P +
Sbjct: 434 NQLEEAHRIFESASER-GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAE 158
T LIR + +H GR + YK G D L + + C +K + +
Sbjct: 493 YTS-----LIRNFF-MH--GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKG 544
Query: 159 HLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
+F + F F + +S++I+++G G +RE ++ MSQ+G D +++ ++
Sbjct: 545 RAIFEDMKSFGFLPDVRSYSILIHGLTKA-GQARETSNIFQAMSQQGFALDARAYNAVVD 603
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K+ + K + ++MK + Y +++ LAK + +A L + + KG+
Sbjct: 604 GLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL 663
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL--- 333
NV+ Y+SLI K ++DEA +EM+++G++P + T+++ +D + EE+ L
Sbjct: 664 NVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICF 723
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+SM++M C P TY +LI R +++ F W E+ + G P+ +YT +I L
Sbjct: 724 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKV 783
Query: 394 GKLEEAHQYYMEMKEKQLLPE 414
G + +A+ + K +P+
Sbjct: 784 GNITDAYSLFERFKTNGGIPD 804
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 19/371 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY S + T++ L + + + A AL+DE++G P +V + I + V
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYN---VCIDCFGKAGSV 262
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFN 176
A F+ K + ++ LC+ + +AE L M +DV P ++N
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDV-PC-AYAYN 320
Query: 177 IILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ G+ GS+ +A ++ + +RG VVSF+ I++C K R + + L LFD
Sbjct: 321 TMIMGY----GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDV 376
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ + + YN +I L V +A + ME G+ PN+++ N ++ LCKA +
Sbjct: 377 MKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
L+EA + F+ +RG +P TY + +D + + G ++ + L E M G Y
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI+ F + + K++ E+ G PD + + +F G++E+ + +MK
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555
Query: 411 LLPEPKTDELL 421
LP+ ++ +L
Sbjct: 556 FLPDVRSYSIL 566
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 180/398 (45%), Gaps = 21/398 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+ A T F K + ST Y+ +I +L + + A+ + DEM P+L++
Sbjct: 368 DEALTLFDVMKKDAKPNIST--YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN- 424
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLM 161
I++ R C + + A F + + L+ L + + DA E ++
Sbjct: 425 --IMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
D P S +I N + + G + +++ EM +RG D+ + + C KA
Sbjct: 483 DAGHDANPIIYTS--LIRNFFMH--GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ K +F+ MK G D + Y+ +IH L K ++ ++ ++M ++G A + Y
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAY 598
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRK 338
N+++ LCK+ K+D+A + +EM + + PT+ TY + +D I +E + L E +
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G + Y LI F + + + + E+ + G P+ ++ +L+ AL +++E
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDW-----SYNKQFV 431
A + MKE + P T +L + YNK FV
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 44/354 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G +FD A+ L++ +R PS+V+
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVS------------------------- 353
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
F +L+ L + + V +A L KD P N ++NII++ C +
Sbjct: 354 -------------FNSILTCLGKKRKVDEALTLFDVMKKDAKP-NISTYNIIIDMLC-MA 398
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA ++ EM G+ +++S + ++ KA L + R+F+ G + Y
Sbjct: 399 GRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTY 458
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I L K + DA L + M + G N + Y SLI+ + ++ + + EM++
Sbjct: 459 CSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIR 518
Query: 307 RGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG P + + ++D + + GE G + E M+ G P +Y +LI ++ Q
Sbjct: 519 RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ +S+ G D +Y A++ L +GK+++A++ EMK K + P T
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT 632
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 182/458 (39%), Gaps = 84/458 (18%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG-KVRKFDTAWALIDE 90
++V VL ++N AA FFL A S Y+ ++ L + + +
Sbjct: 76 DVVVYVLRSLKNPSLAA-PFFLLASASSSQPLPPDAYNAVLPFLSHDLAALEKVLEEMSH 134
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
+ G P+ L+ RR + D R I A + KF + L+ AL
Sbjct: 135 LGYGLPNPACAALVATLVRSRR---LEDAFRVIGAM---RHLKFRPPFSAYTVLIGALAE 188
Query: 151 YKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
+ + A L+ +DV + + F ++ G A + E+ + D+V
Sbjct: 189 ARQPERALELLRQMQDVGYEVSVPLFTTLVRALARE-GQMEPALALVDEVKGSCLEPDIV 247
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRL---------- 258
++ I C+ KA ++ + F ++K G+ D Y +++ L K GRL
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307
Query: 259 ------------------------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
DA L++ + E+G P+VV++NS++ L K RK+
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 367
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI------------IRTGEEVFGL---------- 332
DEA FD M ++ P I TY+ +D+ IR E+ GL
Sbjct: 368 DEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426
Query: 333 ----------------LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
ES + GC P + TY LI + + + ++++ ++ + G+
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ YT+LI F++G+ E+ H+ Y EM + P+
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 141/326 (43%), Gaps = 44/326 (13%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A Q G+A R Y+ ++ L K K D A+ +++EM+ P++ T +++ + +
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK-- 642
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
+ R A+ ++ K + GIE N
Sbjct: 643 ----IDRLDEAYMLFEEAK-SKGIE------------------------------LNVIL 667
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G+ + G EA + EM ++G+ +V +++ ++ K + + L F M
Sbjct: 668 YSSLIDGFGKV-GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM 726
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K M + Y+ +I+ L + + A + M+++G+ PNVVTY ++I L K +
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
+A F+ G P +++A ++ + E + + E R GC+ T I L
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISL 846
Query: 352 IKKFSR---WRQFGNVFKVWNEISEN 374
+ ++ Q V V +EI+++
Sbjct: 847 LDALNKTECLEQAAIVGAVLSEIAKS 872
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 168/374 (44%), Gaps = 23/374 (6%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF FF S + +++ L K++ + + L ++MR P T L
Sbjct: 80 AFQFFHLM-MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT---LN 135
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------M 161
IL+ C V+ VG + R + I + L+ LC + A L +
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL 195
Query: 162 FCNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQRGICYD--VVSFSCIIS 216
C + + T ++ G C NI + + + + + S GI + V+S+S II
Sbjct: 196 GCTPNAITYGT-----LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K R + LF++MK G+ Y ++IH G ++A L M +GV P
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLL 333
NVVT+N LI LCK K+ EA+ + M+QRGI P + TY++ ++ ++ L
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
SM GC+P Y +LI + + + K++N + + G PD +Y AL+ LF
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430
Query: 394 GKLEEAHQYYMEMK 407
GK+ +A + + MK
Sbjct: 431 GKVGDAKKLFGVMK 444
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 165/350 (47%), Gaps = 10/350 (2%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y +I L K R+ D A L +EM+ P++++ +L I +C A F
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL---IHGFCCGGKWEEAKRLF 300
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ F L+ LC+ V +A+ L+ + + P N ++N ++ G+C
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP-NLLTYNSLIEGFC- 358
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
++G A +++ M +G DV+ ++ +I+ Y K + + ++L++ M ++G D K
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y A++ L +G V DA L M+ G+ ++ Y + LCK L EA + F+++
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 478
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
I I ++ +D + + G E + L E + + QP TY ++I +F R Q
Sbjct: 479 KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 538
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
++ ++ +NG PD+ +Y LI F + KLE+ + M ++ +
Sbjct: 539 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 588
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF+ ++S +K ++ +V L++QM+ GI D N +++ L V + +++M +
Sbjct: 98 SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEE 328
+G P++VTY +LIK LC ++ +A F M + G +P TY + + RTG
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217
Query: 329 VFGLL--------ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
L S+ + +P +Y ++I + R+ ++ E+ G P
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
SYT+LIH GK EEA + + EM + + P T +L D
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 182/449 (40%), Gaps = 85/449 (18%)
Query: 50 TFFLWAG-KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI 108
F+L+ + SG + + ++ L V + A++ + P +VT TL
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTL-- 172
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNK 165
I+ C H + +A F ++ + L+ LCR N+ A L M +
Sbjct: 173 -IKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231
Query: 166 DVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
++ N K S++II++ C EA ++ EM +G+ V+S++ +I +
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKD-RREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCG 290
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ RLF++M G++ + +N +I L K V +A L++ M ++G+ PN++TY
Sbjct: 291 GKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 350
Query: 282 NSLIKPLC-----------------------------------KARKLDEARQAFDEMLQ 306
NSLI+ C K K++EA + ++ MLQ
Sbjct: 351 NSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 410
Query: 307 RGISPTIRTYHAFLDIIRTGEEV------FGL----------------LESMRKMGC--- 341
G P ++TY A L + G +V FG+ L + K GC
Sbjct: 411 VGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 470
Query: 342 -------------QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + + LI + + ++++ ++ + PD +Y +IH
Sbjct: 471 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G++ +A+ + +M++ P+ T
Sbjct: 531 EFCRGGQVVKANILFQKMEKNGCTPDKIT 559
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 17/279 (6%)
Query: 149 CRYKNVQDAE-----HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
C+ N+ + HLM + P + SF +L+G I S + ++ +M G
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLS--SFTHLLSGLAKIKHYS-QVFYLYNQMRLSG 126
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
I D + + +++C + + L + + R G D Y +I L + A
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR----GIS--PTIRTYH 317
L M++ G PN +TY +L+K LC+ + A + EML GI+ P + +Y
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + R +E L E M+ G PT +Y LI F ++ +++NE+
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G P+ ++ LI L GK+ EA M ++ ++P
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 345
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+++I V ++A L M P ++ +LI YC
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT---VLINGYCKTS 396
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
V A+ + + ++ + LL+ L + V DA+ L K P + +
Sbjct: 397 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 456
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I LNG C G EA ++ ++ I D+ F+C+I KA L LF+++ +
Sbjct: 457 IFLNGLCKN-GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 515
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D YN +IH +G V A L + ME+ G P+ +TY +LI+ +++KL++
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 575
Query: 297 ARQAFDEMLQRGIS 310
+ M+QR +S
Sbjct: 576 VVELLHMMVQRDVS 589
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 179/388 (46%), Gaps = 13/388 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R + + AF FF WA +Q GY H Y+ +I IL K
Sbjct: 68 LDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRYK 127
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ G V + LL ++R Y H A R +
Sbjct: 128 SRQFGVLCNVLDHMK--RHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE 185
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++ + GWC ++A +V
Sbjct: 186 TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRA-RDPKKAMKVLE 244
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + ++ I + A + + LF+ M+ G+ K Y+ +I ALA
Sbjct: 245 EMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALA 304
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M G P+V TY LI+ +C KLD A + DEM + G P I
Sbjct: 305 KADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFPPDIV 364
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ FL++ R ++ L E M + C+P+ TY M++ F + + E+
Sbjct: 365 TYNCFLNVFCSHRKADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICLEM 424
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEA 399
+ +Y +I+ LF G+ E A
Sbjct: 425 DKRRCQRAIDTYEIMIYGLFDCGETEYA 452
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ ++ ++ G C ++G A RV EM + G D+V+++C ++ + R L L
Sbjct: 327 DVTTYKDLIEGMC-LVGKLDAAYRVLDEMGRAGFPPDIVTYNCFLNVFCSHRKADDALEL 385
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M E YN ++ + A+ + M+++ + TY +I L
Sbjct: 386 CERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICLEMDKRRCQRAIDTYEIMIYGLFD 445
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRK 338
+ + A DE++ R + + + + A + D+ G + L E MRK
Sbjct: 446 CGETEYATALLDEVINRDMKLSYKKFDAIMLRLSDVGNLG-AIHRLSEHMRK 496
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 10/370 (2%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
FF WAG Q Y H T Y+ ++ +L K + D + ++M P+ T LL
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLL-- 59
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDV 167
R C A + F + + + L++ LCR + V +A L+ +
Sbjct: 60 -RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++ +L+G C + G +EA ++ M RG D V ++ +I +SK ++ +
Sbjct: 119 QP-NVVTYGSLLSGLCKM-GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RLF++M G YN+++ ++ SL K M +G PN+ T+N+L+
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPT 344
CK + EA + F EM G P + +Y+ + + G+ E LL M + G P
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y +LI +S+ + K++ EI ++G PD SY+ +I L GK+ A +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 405 EMKEKQLLPE 414
+M P+
Sbjct: 357 DMIANGSAPD 366
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 162/376 (43%), Gaps = 48/376 (12%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
+E A + F Q G + + Y +IA L + +K D A L++EM G P++VT
Sbjct: 68 FEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 105 TLL--------------------------------ILIRRYCAVHDVGRAINAFYAYKRF 132
+LL +LI + D+G A F
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186
Query: 133 KFAVGIEDFQGLLSALCR---YKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNII 186
+ + LLS R + VQ M C ++F FN +L+G+C +
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN-----LLDGFCKM- 240
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA R+++EM G DVVS++ +I H+ RL +M R G+ D Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I +K + AI L + + G+ P+ +Y+++I LC+A K+ A F +M+
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G +P + + GE E L ++M K C P Y +L+ K + ++ +
Sbjct: 361 NGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDD 420
Query: 364 VFKVWNEISENGNGPD 379
V ++++E++E G PD
Sbjct: 421 VCEIFHELTERGFSPD 436
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 5/292 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT ++ +L C EA V+ M+ +G +V S+S +I+ + + + + L
Sbjct: 51 NTYTYGYLLRSLCQA-QRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G + + Y +++ L K +K+A+ L M +G P+ V YN LI K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ EA + F+EML++G PT+ TY++ L R GE V L + M + GC P T
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ L+ F + +++ E+ G PD SY LI + GK EA + EM
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQD 459
+ P+ + +L D Y+K L P+SG S + D
Sbjct: 290 RSGVGPDIVSYNILID-GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K A+ L +EM P++ T +LL R + GR + F
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK---GEFGRVQSLFK 216
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
R I F LL C+ ++ +A L + + P + S+N ++ G C+
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK- 275
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA+R+ EM + G+ D+VS++ +I YSK+ L ++LF ++ + G+E D Y
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT-------------------------- 280
+ +I L + V A + K M G AP+
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Query: 281 ---------YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
YN L+ LCKA++ D+ + F E+ +RG SP + L+ +R ++
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ +S++ ++ +K+ V ++ M G + Y ++ +L + + ++A S+
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+ M +G +PNV +Y+ LI LC+ +K+DEA + +EM+ G P + TY + L + +
Sbjct: 75 FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G +E L M GC P Y +LI FS+ G ++++ E+ E G P +
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
Y +L+ G+ + +M + +P T + LL + VE
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 191/422 (45%), Gaps = 43/422 (10%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF----DTA 84
+S + S+V+S R+D + FF+W K S Y + + ++ ++ F D
Sbjct: 67 MSPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVI 126
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV-GRAIN------------------- 124
ALI E E + +L LI + + +V G +N
Sbjct: 127 VALIRECSRCE--------KEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 125 AFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKSFNIIL 179
A+ Y+R + F VG+ D++ +++ALC+ + AE M C K F ++ +L
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM-CKILKVGFLLDSHIVTSLL 237
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C + + R+A +V+ MS+ G C + VS+S +I + L + L DQM G
Sbjct: 238 LGFCRGL-NLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + Y +I AL L+ A +L M +G PNV TY LI LC+ K++EA
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKF 355
+M++ GI P++ TY+A ++ + G V F LL M K C+P T+ L++
Sbjct: 357 GVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R + + + +NG PD SY LI L G + A++ M L P+
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDC 476
Query: 416 KT 417
T
Sbjct: 477 LT 478
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 198/463 (42%), Gaps = 49/463 (10%)
Query: 21 KIEECGIKVSSELVSEVL-SWVRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKV 78
KI + G + S +V+ +L + R + A F ++ A ++ Y +I L +V
Sbjct: 220 KILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEV 279
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
+ + A+ L D+M GE G T+ T +LI+ C + +A N F +
Sbjct: 280 GRLEEAFGLKDQM--GEKGCQPSTR-TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNV 336
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWC----------- 183
+ L+ LCR +++A + C K +FP + ++N ++NG+C
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGV--CRKMVKDGIFP-SVITYNALINGYCKDGRVVPAFEL 393
Query: 184 -----------NI------------IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
N+ +G +A + M G+ D+VS++ +I +
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+++ +L M +E D + A+I+A K A + + M KG++ + VT
Sbjct: 454 EGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
+LI +C K +A + +++ + T + + LD++ G +E +L +
Sbjct: 514 GTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKIN 573
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K+G P+ TY L+ R F++ + +G P+ YT +I+ L G++E
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
EA + M++ + P T ++ N ++R + +++A
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 149/346 (43%), Gaps = 16/346 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G S Y+ +I K + A+ L+ M P++ T L+ + R
Sbjct: 364 KDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR----- 418
Query: 118 DVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNT 172
VG+ A + KR + I + L+ LCR ++ A L+ D+ P +
Sbjct: 419 -VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEP-DC 476
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+F I+N +C G + A M ++GI D V+ + +I L + +
Sbjct: 477 LTFTAIINAFCKQ-GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ +M + N ++ L+KG +K+ ++++ + + G+ P+VVTY +L+ L ++
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+ + + + M G P + Y ++ + + G EE LL +M+ G P + TY
Sbjct: 596 DISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
+++K + + + + E G + Y++L+ L+ K
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDA 262
+ +DV+ + I C + + K++ FD+++ + G + Y++++ +LAK L A
Sbjct: 121 VAHDVI-VALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLA 179
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-------ISPTIRT 315
+ ME G ++ Y +++ LCK + A ++L+ G ++ +
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLG 239
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ L++ R +VF L+ R+ C P + +Y +LI + F + +++ E G
Sbjct: 240 FCRGLNL-RDALKVFDLMS--REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P +YT LI AL G +++A + EM + P T +L D
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLID 344
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C +V+P+ II+NG C G EAE++ M G+ + V+++ ++ Y
Sbjct: 612 CLPNVYPYT-----IIINGLCQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALA---KG------RLVKDAISLMKSMEEKG 273
L + L M G E + ++Y++++ KG +K+ IS+++ + G
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQL--GG 723
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ + L+ LCK + DE+ +L+ G+
Sbjct: 724 STSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGV 757
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 41/386 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ STR Y ++ + RK A ++ EM P +VT + I YC
Sbjct: 103 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV---INAYCKE 159
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR +A + K L C +V+ ++N
Sbjct: 160 ---GRMSDALRVLELMK--------------------------LRGCKPNVW-----TYN 185
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+CN G +A + +M G+ D V+++ +I ++ RL M+
Sbjct: 186 ALVQGFCNE-GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D+ YNA+I+AL K A SL S+E +G+ PN VT+NSLI LCK+ K D
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + ++M+ G +P TY +F++ + + +E + M + +P+ Y ++I
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
K + R +G V + W E+ +G PD +YT + A + G+L EA MEM + +
Sbjct: 365 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424
Query: 414 EPKTDELLQDWSYNKQFVERQIASLK 439
+ L D + + ++ LK
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILK 450
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 38/430 (8%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
HK + NK+ CG+ + + ++ + E+AF L + G Y+
Sbjct: 198 HKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNA 256
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I L K + D A +L D + P+ VT +L I C G+A A+ +
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL---INGLCKS---GKADIAWKFLE 310
Query: 131 RFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ A D + + LC+ K Q+ + KDV P +T ++ I+++
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLKE 369
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
A R W EM G DVV+++ + Y L++ + +M + G+ D
Sbjct: 370 RNYGLVA-RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 428
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR------------- 292
YN ++ A A+S++K M PN TY L++ L + R
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 488
Query: 293 ----KLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPT 344
+L + FD M + P TY + L+ RT EE L+ M++
Sbjct: 489 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT-EEATSLVSLMKEDSISLN 547
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
D Y L+ F + +++ + + + + ++G P SY L+ L G+ ++A + +M
Sbjct: 548 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 607
Query: 405 EMKEKQLLPE 414
+ K P+
Sbjct: 608 NSRWKDYSPD 617
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +F+ +I Y + + LFD+M G D Y +I L + + +A+ L
Sbjct: 9 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII--- 323
M++ P++ Y +L+K LC A + +E M + G P+ R Y A +D
Sbjct: 69 GEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
R +E +L+ M + G P T +I + + + + +V + G P+ +Y
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
AL+ GK+ +A +M+ + P+ T LL
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 222
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R G D +N++I + V A L M +G A +VV+Y +LI+ LC+A +
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
+DEA + F EM Q P + Y A + + GEE +L M+++G +P+ Y
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ R R+ ++ E+ E G P + TA+I+A G++ +A + MK +
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 411 LLPEPKTDELLQDWSYN 427
P W+YN
Sbjct: 177 CKPNV--------WTYN 185
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 157/393 (39%), Gaps = 61/393 (15%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYHTMIAILGKV 78
+ +E GIK ++ + +++ + +A + FL +G T Y + I L K+
Sbjct: 275 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
+ + I EM + PS V I+I + + G + +
Sbjct: 335 KGSQEGLSFIGEMLQKDVKPSTVNYT---IVIHKLLKERNYGLVARTWGEMVSSGCNPDV 391
Query: 139 EDFQGLLSALCRYKNVQDAEH-LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ + A C + +AE+ LM +K+ +T ++N +++G +I G + A +
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI-GQTDHAVSILK 450
Query: 198 EMSQRGICYDVVSFSCII-----------------SCYSKARNLHKVLRLFDQMKRMGIE 240
+M+ + ++ ++ + KA L V LFD MK+
Sbjct: 451 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 510
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ Y++++ ++ ++A SL+ M+E ++ N Y +L+ CK+++ +A
Sbjct: 511 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 301 FDEMLQRGISPTIRTY-HAFLDIIRTGE-----EVF--------------------GLLE 334
M+Q G P + +Y H +I G+ E+F GL++
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 630
Query: 335 S------------MRKMGCQPTNDTYIMLIKKF 355
+ +M C+P++ TY ML ++
Sbjct: 631 KGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 156/319 (48%), Gaps = 15/319 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T L+ C V AI + + + + ++S LC+ V++A ++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 163 CNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+D P NT ++N +++ C N + + E RV ++ +GI DV +F+ +I
Sbjct: 357 ITRDCSP-NTVTYNTLISTLCKENQVEEATELARV---LTSKGILPDVCTFNSLIQGLCL 412
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVV 279
RN + LF++M+ G E D YN +I +L +KG+L +A++++K ME G A +V+
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL-DEALNMLKQMELSGCARSVI 471
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESM 336
TYN+LI CKA K EA + FDEM G+S TY+ +D + R E+ L++ M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P TY L+ F R + ++ NG PD +Y LI L G++
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 397 EEAHQYY--MEMKEKQLLP 413
E A + ++MK L P
Sbjct: 592 EVASKLLRSIQMKGINLTP 610
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 20/368 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q GY Y+++I+ L K+ + A ++D+M + P+ VT T LI C +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT---LISTLCKEN 379
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
V A + F L+ LC +N + A L C D F
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF--- 436
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N++++ C+ G EA + +M G V++++ +I + KA + +F
Sbjct: 437 --TYNMLIDSLCS-KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M+ G+ + YN +I L K R V+DA LM M +G P+ TYNSL+ C+
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+ +A M G P I TY + + + G E LL S++ G T Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISE-NGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEM 406
+I+ R R+ ++ E+ E N PD SY + L G + EA + +E+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 407 KEKQLLPE 414
EK +PE
Sbjct: 674 LEKGFVPE 681
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 174/405 (42%), Gaps = 16/405 (3%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG--ETGPSLV 101
D AA F A K+ ++ Y ++ LG+ FD ++++M+ E G S
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS-- 119
Query: 102 TKQTLLILIRRYCAVHDVGRAINAF-YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-- 158
T LILI Y ++ + F + +L+ L +++ E
Sbjct: 120 ---TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
H + P + +FN+++ C R A + +M G+ D +F+ ++ Y
Sbjct: 177 HAKMSVWGIKP-DVSTFNVLIKALCR-AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME-EKGVAPN 277
+ +L LR+ +QM G N ++H K V+DA++ ++ M + G P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLE 334
T+N+L+ LCKA + A + D MLQ G P + TY++ + + + GE E +L+
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M C P TY LI + Q ++ ++ G PD ++ +LI L L
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
A + + EM+ K P+ T +L D +K ++ + LK
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 12/311 (3%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
T +LI+ C H + AI + + D + + + Y D + +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGL---VPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 165 KDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYS 219
+ + F S N+I++G+C G +A EMS Q G D +F+ +++
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKE-GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA ++ + + D M + G + D YN+VI L K VK+A+ ++ M + +PN V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESM 336
TYN+LI LCK +++EA + + +GI P + T+++ + + R L E M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
R GC+P TY MLI + + ++ +G +Y LI K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 397 EEAHQYYMEMK 407
EA + + EM+
Sbjct: 487 REAEEIFDEME 497
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 156/319 (48%), Gaps = 15/319 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T L+ C V AI + + + + ++S LC+ V++A +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356
Query: 163 CNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+D P NT ++N +++ C N + + E RV ++ +GI DV +F+ +I
Sbjct: 357 ITRDCSP-NTVTYNTLISTLCKENQVEEATELARV---LTSKGILPDVCTFNSLIQGLCL 412
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVV 279
RN + LF++M+ G E D YN +I +L +KG+L +A++++K ME G A +V+
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL-DEALNMLKQMELSGCARSVI 471
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESM 336
TYN+LI CKA K+ EA + FDEM G+S TY+ +D + R E+ L++ M
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P TY L+ F R + ++ NG PD +Y LI L G++
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 397 EEAHQYY--MEMKEKQLLP 413
E A + ++MK L P
Sbjct: 592 EVASKLLRSIQMKGIALTP 610
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 20/368 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q GY Y+++I+ L K+ + A +D+M + P+ VT T LI C +
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNT---LISTLCKEN 379
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
V A + F L+ LC +N + A L C D F
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF--- 436
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N++++ C+ G EA + +M G V++++ +I + KA + + +F
Sbjct: 437 --TYNMLIDSLCS-KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M+ G+ + YN +I L K R V+DA LM M +G P+ TYNSL+ C+
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRG 553
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+ +A M G P I TY + + + G E LL S++ G T Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISE-NGNGPDRSSYTALIHALF-LNGKLEEAHQYYMEM 406
+I+ R R+ ++ E+ E N PD SY + L G + EA + +E+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 407 KEKQLLPE 414
EK +PE
Sbjct: 674 LEKGFVPE 681
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 172/405 (42%), Gaps = 16/405 (3%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPSLV 101
D AA F A K+ ++ Y ++ LG+ FD ++++M+ G E G S
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTS-- 119
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFY-AYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-- 158
LILI Y + + F + +L+ L N++ E
Sbjct: 120 ---PFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIA 176
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
H + P + +FN+++ C R A + +M G+ D +F+ I+ Y
Sbjct: 177 HAKMSVWGIKP-DVSTFNVLIKALCR-AHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGY 234
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME-EKGVAPN 277
+ +L LR+ +QM G N ++H K V+DA++ ++ M + G P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLE 334
T+N+L+ LCKA + A + D MLQ G P + TY++ + + + GE E L+
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M C P TY LI + Q ++ ++ G PD ++ +LI L L
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
A + + EM+ K P+ T +L D +K ++ + LK
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 12/311 (3%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
T +LI+ C H + AI + + F ++ Y D + +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQG---YIEEGDLDGALRIR 247
Query: 165 KDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYS 219
+ + F S N+I++G+C G +A EMS Q G D +F+ +++
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKE-GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA ++ + + D M + G + D YN+VI L K VK+A+ + M + +PN V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESM 336
TYN+LI LCK +++EA + + +GI P + T+++ + + R L E M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
R GC+P TY MLI + + ++ +G +Y LI K+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486
Query: 397 EEAHQYYMEMK 407
EA + + EM+
Sbjct: 487 REAEEIFDEME 497
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 193/459 (42%), Gaps = 82/459 (17%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRK------------- 80
VS++L +R D + A FF WAG Q G+ H+T Y ++ ++ + R
Sbjct: 132 VSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIM 191
Query: 81 -------------FDTAWA-----------------------LIDE-------MRGGETG 97
FD W+ L++E MR T
Sbjct: 192 NSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTL 251
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG------IEDFQGLLSALCRY 151
P + LL H + ++ N K F +G + + ++ LC+
Sbjct: 252 PKARSCNFLL---------HRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKE 302
Query: 152 KNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+++++ L +++ + ++N +++G+ + GS E ++ EM G D+++
Sbjct: 303 GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV-GSLEEVASLFNEMKDVGCVPDIIT 361
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +I+CY K + + F +MK G++ + Y+ +I A K +++ AI L M
Sbjct: 362 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR 421
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--- 326
G+ PN TY SLI CKA L EA + ++MLQ G+ I TY A LD + + G
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EEVF SM K G P Y L+ + + + + K+ +++E PD Y
Sbjct: 482 EAEEVF---RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 538
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++I KLEE EMK + + P + D
Sbjct: 539 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 577
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 12/364 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I GKV + +L +EM+ P ++T LI YC
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG---LINCYCKF 372
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKS 174
+ RA F K + + L+ A C+ +Q A L + + P N +
Sbjct: 373 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLP-NEFT 431
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++ C G+ EA ++ +M Q G+ ++V+++ ++ KA + + +F M
Sbjct: 432 YTSLIDANCK-AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ GI +++VY A++H K ++DA+ ++K M E + P+++ Y S+I C RKL
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 295 DEARQAFDEMLQRGIS--PTIRT--YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+E + +EM RGIS P I T A+ ++ + + + M+ +G + T TY +
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL-NFFQEMQDVGVEATIVTYCV 609
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + + G P+ + YT+LI L N +E A + + EM+ +
Sbjct: 610 LIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRG 669
Query: 411 LLPE 414
+ P+
Sbjct: 670 MTPD 673
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 164/369 (44%), Gaps = 16/369 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G + Y ++I K AW L+++M ++VT LL +
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD------GL 474
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR-YKNVQDAEHLMFCNKDVFPFNTKSF 175
GR I A + R GI Q + +AL Y + E M K + N K
Sbjct: 475 CKAGRMIEAEEVF-RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP- 532
Query: 176 NIILNG---WCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++IL G W + E ++ +E M RGI + V + II Y KA L F
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 592
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M+ +G+E Y +I L K +V+ A+ M G+ PNV Y SLI LCK
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
++ A++ FDEM RG++P I + A +D ++ G +E L+ M ++ + Y
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L+ FS+ + K +NE+ E G P+ L+ + G+L+EA + EM+
Sbjct: 713 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 772
Query: 409 KQLLPEPKT 417
L+ E T
Sbjct: 773 MGLITESAT 781
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + S++ ++NG+ G + + EM + I +VV+++ II+ KA+ + K +
Sbjct: 9 PPDVVSYSTVINGFFKE-GDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ M + G+ D YN+++H K+AI +K M GV P+VVTYNSL+ L
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTN 345
CK + EAR+ FD M +RG+ P I TY L T E+ GLL+ M + G P +
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+ +L+ +++ + V++++ + G P+ +Y +I L +G++E+A Y+ +
Sbjct: 188 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 247
Query: 406 MKEKQLLPE 414
M ++ L P+
Sbjct: 248 MIDEGLRPD 256
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVVS+S +I+ + K +L K +++M I + YN++I AL K + V A+ ++
Sbjct: 11 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
+M + GV P+ +TYNS++ C + + EA +M G+ P + TY++ +D + +
Sbjct: 71 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 130
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G E + +SM K G +P TY L++ ++ + + + + NG P+ +
Sbjct: 131 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 190
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ L+ A K+EEA + +M+++ L P T
Sbjct: 191 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 224
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 19/261 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K D ++ +EM P++VT ++ I C V +A+
Sbjct: 15 YSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSI---IAALCKAQTVDKAMEVLT 71
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFPFNTKSFNIIL 179
+ + ++ C + Q E ++F K DV +N+ +
Sbjct: 72 TMVKSGVMPDCMTYNSIVHGFC--SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C EA +++ M++RG+ D+ ++ ++ Y+ L ++ L D M R GI
Sbjct: 130 NGRCT------EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 183
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ V++ ++ A AK V++A+ + M ++G+ PN VTY ++I LCK+ ++++A
Sbjct: 184 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 243
Query: 300 AFDEMLQRGISPTIRTYHAFL 320
F++M+ G+ P Y++ +
Sbjct: 244 YFEQMIDEGLRPDSIVYNSLI 264
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 10/281 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++IA L K + D A ++ M P +T ++ + +C+ AI
Sbjct: 50 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI---VHGFCSSGQPKEAIVFLK 106
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+ LC+ +A + + + P + ++ +L G+
Sbjct: 107 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP-DITTYGTLLQGYATK 165
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI + FS ++ Y+K + + + +F +M++ G+ +
Sbjct: 166 -GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 224
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y VI L K V+DA+ + M ++G+ P+ + YNSLI LC K ++A + F EML
Sbjct: 225 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 284
Query: 306 QRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQP 343
RGI + +++ +D + G E L + M ++G +P
Sbjct: 285 DRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKP 325
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGL 332
P+VV+Y+++I K LD+ ++EML + ISP + TY++ + + +T ++ +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L +M K G P TY ++ F Q ++ +G PD +Y +L+ L
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
NG+ EA + + M ++ L P+ T LLQ ++ VE
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVE 170
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA V+ +M Q+G+ + V++ +I K+ + + F+QM G+ D VYN++I
Sbjct: 205 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 264
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H+L + A L M ++G+ + + +NS+I CK ++ E+ + FD M++ G+
Sbjct: 265 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVK 324
Query: 311 PTIRT 315
P I T
Sbjct: 325 PDIIT 329
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%), Gaps = 11/271 (4%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI--IGSSREAERVWMEM 199
+LS LC+ + V++A L + + P N ++N ++NG C I ++ E ++ EM
Sbjct: 50 VLSGLCQEEKVEEARLLFEKMVKQRINP-NVVTYNTLINGLCKAWRIETAYE---LFKEM 105
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ +G VS++ +I + K ++L +FD+M R + Y +I L+K V
Sbjct: 106 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 165
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ A ++ M +KGV PNV TY+ LI CK R++DEA + ++M+ +GI+PT+ TY+
Sbjct: 166 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 225
Query: 320 LDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L+ + E+ F L M + C PT TY L++ +Q +++ E+ G
Sbjct: 226 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 285
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y L L GK+ EA + +MK
Sbjct: 286 PPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 7/286 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ LC+ K + DA + + + P + +N +L+G C EA ++ +
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMATRGIKP-DAFIYNFVLSGLCQE-EKVEEARLLFEK 69
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++ I +VV+++ +I+ KA + LF +M G YN +I K +
Sbjct: 70 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A + M PNVVTY +LI L K+ K+ A + D M+++G++P + TY
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 319 FLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D +R +E LLE M G PT TY +L+ R + + FK++ +++
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P +Y L+ AL + +L+ AH+ Y EM K P+ T + L
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM+ RGI D ++ ++S + + + LF++M + I + YN +I+ L K
Sbjct: 34 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 93
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++ A L K M KG P V+YN+LI CK + L A+ FD+M++ P + TY
Sbjct: 94 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 153
Query: 318 AFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + +V +L+ M K G P TY LI F + R+ K+ ++
Sbjct: 154 TLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 213
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF 430
G P +Y L+++L KLE+A + + M +++ P T + LL+ ++KQ
Sbjct: 214 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 270
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++ I+ K + + L ++M GI+ D +YN V+ L + V++A L
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
+ M ++ + PNVVTYN+LI LCKA +++ A + F EM +G PT +Y+ +D
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127
Query: 327 EEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+++ + + M + C P TY LI S+ + +V + + + G P+ ++Y
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ LI +++EAH+ +M + + P T +L
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 225
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 7/239 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + +TA+ L EM G P+ V+ T LI +C D+ A + F
Sbjct: 82 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT---LIDGFCKKKDLVAAKDVFD 138
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
R + + L+ L + VQ A ++ K V P N +++ +++G+C
Sbjct: 139 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP-NVATYSCLIDGFCK- 196
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ EA ++ +M +GI VV+++ +++ +A L +LF M +
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 256
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++ AL + + A L M KG P+ +TY++L L +A K+ EA++ ++M
Sbjct: 257 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGL 332
P+ +TY +++ LCK +++D+A +EM RGI P Y+ L + EE L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
E M K P TY LI + + ++++ E++ G P SY LI
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L A + +M +P T L D
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLID 157
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 175/401 (43%), Gaps = 47/401 (11%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ ++ L K++ F TA +L +M P LVT L ILI +C + + +
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVT---LSILINCFCHLGQMAFSF 187
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
+ + + L+ LC V+ + H F +K V F N S+ +LN
Sbjct: 188 SVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLH--FHDKVVAQGFQMNQVSYGTLLN 245
Query: 181 GWCNIIGSSR-----------------------------------EAERVWMEMSQRGIC 205
G C I G +R EA + EM+ RGI
Sbjct: 246 GLCKI-GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIF 304
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
DV+++S +I + A L L ++M I D Y +I AL K +K+A +L
Sbjct: 305 PDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNL 364
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
+ M ++GV PNVVTY++L+ C ++ A+Q F M+Q ++P++ +Y+ ++ +
Sbjct: 365 LGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCK 424
Query: 326 G---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G +E LL M P TY LI + + + + E+ G D +
Sbjct: 425 GKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
YT+L+ L N L++A +M+MKE+ + P T L D
Sbjct: 485 YTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 525
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 168/352 (47%), Gaps = 14/352 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + + A+ EM P ++T TL+ C G+ + AF
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI------CGFCLAGQLMGAFS 328
Query: 128 AYKRFKFA---VGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWC 183
+ + L+ ALC+ +++A++L+ K+ N +++ +++G+C
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
++G A++++ M Q + V S++ +I+ K +++ + + L +M + +
Sbjct: 389 -LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++I L K + A+ LMK + +G +V+TY SL+ LCK + LD+A F +
Sbjct: 448 VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +RGI P TY A +D + G + L + + GC TY ++I +
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ +++ +NG PD ++ +I +LF + ++A + EM K LL
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 162/355 (45%), Gaps = 41/355 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ STR Y ++ + RK A ++ EM P +VT + I YC
Sbjct: 281 KELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV---INAYC-- 335
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR +A + K L C +V+ ++N
Sbjct: 336 -KEGRMSDALRVLELMK--------------------------LRGCKPNVW-----TYN 363
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+CN G +A + +M G+ D V+++ +I ++ RL M+
Sbjct: 364 ALVQGFCNE-GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 422
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D+ YNA+I+AL K A SL S+E +G+ PN VT+NSLI LCK+ K D
Sbjct: 423 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + ++M+ G +P TY +F++ + + +E + M + +P+ Y ++I
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 542
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
K + R +G V + W E+ +G PD +YT + A + G+L EA MEM +
Sbjct: 543 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 597
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 19/360 (5%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R + +++A L + A L M P T T +IR C D+ RA+
Sbjct: 118 RPFASLLAHLSRFALAPLALRLFAHMH--RHAPPAPTAPTYNAVIRSLCRRADLARALRY 175
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILN 180
R + F L+ CR V A L D P + S+ ++
Sbjct: 176 LSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF----DKMPLRGFAQDVVSYATLIE 231
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C G EA ++ EM Q D+ ++ ++ A + L + +MK +G
Sbjct: 232 GLCE-AGRIDEAVELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWR 286
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ Y AV+ + R K+A +++ M EKG+AP VVT ++I CK ++ +A +
Sbjct: 287 PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV 346
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ M RG P + TY+A + G+ + LL MR G P TY +LI+
Sbjct: 347 LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI 406
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ F++ + +G D+ +Y ALI+AL +G+ ++A + ++ + + P T
Sbjct: 407 DGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 466
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 38/430 (8%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
HK + NK+ CG+ + + ++ + E+AF L + G Y+
Sbjct: 376 HKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNA 434
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I L K + D A +L D + P+ VT +L I C G+A A+ +
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL---INGLC---KSGKADIAWKFLE 488
Query: 131 RFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ A D + + LC+ K Q+ + KDV P +T ++ I+++
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLKE 547
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
A R W EM G DVV+++ + Y L++ + +M + G+ D
Sbjct: 548 RNYGLVA-RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR------------- 292
YN ++ A A+S++K M PN TY L++ L + R
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 666
Query: 293 ----KLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPT 344
+L + FD M + P TY + L+ RT EE L+ M++
Sbjct: 667 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT-EEATSLVSLMKEDSISLN 725
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
D Y L+ F + +++ + + + + ++G P SY L+ L G+ ++A + +M
Sbjct: 726 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 785
Query: 405 EMKEKQLLPE 414
+ K P+
Sbjct: 786 NSRWKDYSPD 795
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+++ +I + +L + LR M R G D +N++I + V A L M
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTG 326
+G A +VV+Y +LI+ LC+A ++DEA + F EM Q P + Y A + + G
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERG 270
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EE +L M+++G +P+ Y ++ R R+ ++ E+ E G P + TA+
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
I+A G++ +A + MK + P W+YN
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKP--------NVWTYN 363
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 10/286 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT-KSFNIILNGWCNIIGSSREAERVWME 198
F LL+ L R+ A L ++ P T ++N ++ C +R A R
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLAR-ALRYLSL 178
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G D +F+ +I Y + + LFD+M G D Y +I L +
Sbjct: 179 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 238
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ +A+ L M++ P++ Y +L+K LC A + +E M + G P+ R Y A
Sbjct: 239 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 294
Query: 319 FLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D R +E +L+ M + G P T +I + + + + +V + G
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P+ +Y AL+ GK+ +A +M+ + P+ T LL
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL 400
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 157/393 (39%), Gaps = 61/393 (15%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYHTMIAILGKV 78
+ +E GIK ++ + +++ + +A + FL +G T Y + I L K+
Sbjct: 453 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 512
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
+ + I EM + PS V I+I + + G + +
Sbjct: 513 KGSQEGLSFIGEMLQKDVKPSTVNYT---IVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569
Query: 139 EDFQGLLSALCRYKNVQDAEH-LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ + A C + +AE+ LM +K+ +T ++N +++G +I G + A +
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI-GQTDHAVSILK 628
Query: 198 EMSQRGICYDVVSFSCII-----------------SCYSKARNLHKVLRLFDQMKRMGIE 240
+M+ + ++ ++ + KA L V LFD MK+
Sbjct: 629 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 688
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ Y++++ ++ ++A SL+ M+E ++ N Y +L+ CK+++ +A
Sbjct: 689 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 301 FDEMLQRGISPTIRTY-HAFLDIIRTGE-----EVF--------------------GLLE 334
M+Q G P + +Y H +I G+ E+F GL++
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 808
Query: 335 S------------MRKMGCQPTNDTYIMLIKKF 355
+ +M C+P++ TY ML ++
Sbjct: 809 KGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841
>gi|115445705|ref|NP_001046632.1| Os02g0304800 [Oryza sativa Japonica Group]
gi|113536163|dbj|BAF08546.1| Os02g0304800 [Oryza sativa Japonica Group]
Length = 617
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 178/400 (44%), Gaps = 22/400 (5%)
Query: 15 RSEMRNKIEECGI----KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
R+ + + GI +S E++S V+S A FF WA S S +
Sbjct: 86 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 145
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + F ++ MR P + TL I+I A V AI
Sbjct: 146 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLI---N 199
Query: 131 RFKFAVGI-------EDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGW 182
F +G+ E F L++ LCR +V A L+ ++ + + +N ++ GW
Sbjct: 200 TDHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGW 259
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G + E W M + G+ D VS+ +I +A + L++F++M G
Sbjct: 260 AR-FGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPT 318
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YNA+I I K M + PN+ TY +I+ + RK+ +A Q FD
Sbjct: 319 TMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFD 378
Query: 303 EMLQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWR 359
EML RGI P+ F++ + T G LL + RK GC+ + Y +L+++ + +
Sbjct: 379 EMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLERLAMFG 438
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G V ++W E+ E+G+ D+ Y +++ L GK++ A
Sbjct: 439 KSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAA 478
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EML 305
N VI AL + + ++ M + GV+P++ T +I L AR ++ A Q + +
Sbjct: 144 NIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHF 203
Query: 306 QRGISPTIRTYHAFLDIIR--TGEEVFGLLESMRKMGCQPTND-TYIMLIKKFSRWRQFG 362
G+ T + F +I GL S+ + T D M + W +FG
Sbjct: 204 GLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFG 263
Query: 363 NVFKV---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
V KV W + E+G PD+ SY LI AL + EEA Q + +M + P
Sbjct: 264 RVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCP 317
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 151/317 (47%), Gaps = 5/317 (1%)
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T IL+ A D+ + F K + + + +++A CR NV+ A +
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 162 F-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
C + N ++ ++NG+C I G AE + +M RG+ + + F+ +I Y +
Sbjct: 272 DECVGNGIEPNEHTYGALINGFCKI-GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ K L + M++MGIE D YN + L + + +A +L++ M EKGV PN V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMR 337
Y +LI C + EAR+ F EM G P++ TY+ +D I+ G E + M
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K G P +Y L+ + +++ E+ + G+ P+ +YTALI L G+ E
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 398 EAHQYYMEMKEKQLLPE 414
EA Q Y M L P+
Sbjct: 511 EAFQLYDNMLGDGLTPD 527
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 128/269 (47%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y +I K+ + + A L+ +M+ G + + T+ I YC +
Sbjct: 277 NGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM---IDGYCRKNM 333
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V +A+ ++ + + + L L R + +A++L+ K V P N S+
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP-NHVSYT 392
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G EA R++ EM+ G +V+++ ++ Y K ++ + R +M++
Sbjct: 393 TLISIHCNE-GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEK 451
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y A++H V A+ L + M+++G PN+V Y +LI L K + +E
Sbjct: 452 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEE 511
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D ML G++P Y A + + T
Sbjct: 512 AFQLYDNMLGDGLTPDDALYSALVGSLHT 540
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 152/370 (41%), Gaps = 43/370 (11%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
DTA L+ + + P VT + +++ YC V A R V
Sbjct: 123 LDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180
Query: 141 FQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE---AERVW 196
+ LL A R K+ AE L + ++ I+++G + ++R+ E V+
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDG----LSAARDITKVEAVF 236
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + + DV +S +I+ Y +A N+ + +FD+ GIE + Y A+I+ K
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A L+ M+ +GV N + +N++I C+ +D+A + M + GI + TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + C +++ +R + N+ ++ + E G
Sbjct: 357 NT--------------------LACG---------LRRANRMDEAKNLLRI---MIEKGV 384
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
P+ SYT LI G + EA + + EM P T ++ D Y K+ R+
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD-GYIKKGSIREAE 443
Query: 437 SLKAHQPQSG 446
K + G
Sbjct: 444 RFKKEMEKKG 453
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 171/367 (46%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G +V T+ I C +V
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI---IDSMCKDKNV 226
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + I + L+S C ++DA L ++++ P + +FNI
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINP-DVYTFNI 285
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ +C G +EA+ M ++GI D+V+++ ++ Y ++ + + M
Sbjct: 286 LVDAFCKE-GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + YN VI+ K ++V A+ L K M K + PNV+TYNSLI LCK+ ++ A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ D M RG P I TY + LD + ++ LL ++ G +P TY +LI
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++ ++ G ++YT +I +G +EA +MK+ +P+
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524
Query: 415 PKTDELL 421
T E++
Sbjct: 525 AITYEII 531
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 170/350 (48%), Gaps = 10/350 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I + K + + A+ L EM ++VT L I +C V + AI F
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSAL---ISGFCIVGKLKDAIGLFN 269
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH--LMFCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ A C+ V++A++ M + + P + ++N +++G+C +
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP-DIVTYNSLMDGYC-L 327
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ A+ + MS RG+ V S++ +I+ + K + + + ++LF +M I +
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVIT 387
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++I L K + A+ L+ M ++G P+++TY+S++ LCK +D+A ++
Sbjct: 388 YNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLK 447
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+GI P + TY +D + G E+ + E + G T +TY ++I+ F F
Sbjct: 448 DQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFD 507
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ +++ +N PD +Y +I +LF + ++A + EM + LL
Sbjct: 508 EALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 21/281 (7%)
Query: 162 FCNKDVFPF---------------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
FC + PF +T + N + G+C + G +A ++ G
Sbjct: 115 FCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC-LKGQIHQALNFHDKLVALGFHL 173
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D VS+ +I+ K L L ++ ++ D +Y+ +I ++ K + V DA L
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII--- 323
M + ++ N+VTY++LI C KL +A F++M I+P + T++ +D
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R E G L M K G +P TY L+ + + + N +S G S
Sbjct: 294 GRVKEAKNG-LAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y +I+ +++A + + EM KQ+ P T L D
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F I+ K+++ H VL LF +M+ GI+ + +N +I+ + L+ A S++ +
Sbjct: 73 FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+ G P+ +T N+ IK C ++ +A D+++ G +Y ++ + E
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192
Query: 331 GLLESMRKMGCQPTNDTYIM---LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
LE +R++ + +M +I + + + F +++E+ + +Y+ALI
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ GKL++A + +M + + P+ T +L D
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 96/232 (41%), Gaps = 3/232 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ +M RGI + V+F+ +I+C+ + + + ++ +MG E D N I
Sbjct: 92 LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+ A++ + G + V+Y +LI LCK + A + + + + +
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y +D + + + F L M TY LI F + + ++N++
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ PD ++ L+ A G+++EA M ++ + P+ T L D
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
YH ++ +GK + + + +EM + VT T+ I + AIN +Y
Sbjct: 107 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI---ISGLVKSKMLDEAINLYY 163
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL----MFCNKDVFPFNTKSFNIILNGWC 183
F+ + LL L + N++DAE L + C + N +NI+LNG+
Sbjct: 164 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP---NCAIYNILLNGY- 219
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G + + ++ M ++G+ D+ S++ +I L+ L F Q+ MG+E D
Sbjct: 220 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 279
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN +IH L K +++A+SL ME+KG+APN+ TYNSLI L KA K EA + ++E
Sbjct: 280 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 339
Query: 304 MLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+L +G P + TY+A + + + E F M GC+P + TY+ L
Sbjct: 340 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS--REAERVWMEMSQRG 203
LC++K A L+ F N V T S+N ++ C ++ AE ++ EM + G
Sbjct: 44 LCKHKEALAAHELVKKFENLGV-SLKTGSYNALI---CGLVDEDLIDIAEELFSEMKRLG 99
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D ++ I+ K+ + +L++ ++M G + YN +I L K +++ +AI
Sbjct: 100 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 159
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+L + +G +P TY L+ L K +++A FDEML+ G P Y+ L+
Sbjct: 160 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 219
Query: 324 RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
R E+V L ESM + G P +Y ++I + + + ++++ G PD
Sbjct: 220 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 279
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+Y LIH L +G+LEEA Y +M++K + P
Sbjct: 280 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 312
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 3/196 (1%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
LF +MKR+G + D Y+ ++ A+ K ++D + + + M KG VTYN++I L
Sbjct: 90 ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 149
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
K++ LDEA + +++ G SPT TY LD +++ G E+ L + M + GC+P
Sbjct: 150 VKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNC 209
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
Y +L+ + V +++ + E G PD SYT +I L +G+L + Y+ +
Sbjct: 210 AIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQ 269
Query: 406 MKEKQLLPEPKTDELL 421
+ + L P+ T LL
Sbjct: 270 LTDMGLEPDLITYNLL 285
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 3/186 (1%)
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K + + + G+ D + +I L K + A L+K E GV+ +YN+LI
Sbjct: 17 KSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALI 76
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQ 342
L +D A + F EM + G P TYH LD + E++ + E M G +
Sbjct: 77 CGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYK 136
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
T TY +I + + ++ ++ G P +Y L+ L +G +E+A
Sbjct: 137 STYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL 196
Query: 403 YMEMKE 408
+ EM E
Sbjct: 197 FDEMLE 202
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 250 IHALAKGRLVKD----AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+H+L +G L +D +I +++ G+ + + + +I+ LCK ++ A + +
Sbjct: 2 VHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFE 61
Query: 306 QRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
G+S +Y+A + D+I EE+F M+++GC P TY +++ +
Sbjct: 62 NLGVSLKTGSYNALICGLVDEDLIDIAEELF---SEMKRLGCDPDEFTYHLILDAMGKSM 118
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-- 417
+ ++ K+ E+ G +Y +I L + L+EA Y ++ + P P T
Sbjct: 119 RIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYG 178
Query: 418 ---DELLQDWS 425
D LL+D +
Sbjct: 179 PLLDGLLKDGN 189
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T IL+ A D+ + F K + + + +++A CR NV+ A +
Sbjct: 136 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 195
Query: 162 F-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
C + N ++ ++NG+C I G AE + +M RG+ + + F+ +I Y +
Sbjct: 196 DECVGNGIEPNEHTYGALINGFCKI-GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ K L + M++MGIE D YN + L + + +A +L++ M EKGV PN V+
Sbjct: 255 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 314
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMR 337
Y +LI C + EAR+ F EM G P++ TY+ +D I+ G E M
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K G P +Y L+ + +++ E+ + G+ P+ +YTALI L G+ E
Sbjct: 375 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 434
Query: 398 EAHQYYMEMKEKQLLPE 414
EA Q Y M L P+
Sbjct: 435 EAFQLYDNMLGDGLTPD 451
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y +I K+ + + A L+ +M+ G + + T+ I YC +
Sbjct: 201 NGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM---IDGYCRKNM 257
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V +A+ ++ + + + L L R + +A++L+ K V P N S+
Sbjct: 258 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP-NHVSYT 316
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G EA R++ EM+ G +V+++ ++ Y K ++ + R ++M++
Sbjct: 317 TLISIHCNE-GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEK 375
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y A++H V A+ L + M+++G PN+V Y +LI L K + +E
Sbjct: 376 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEE 435
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D ML G++P Y A + + T
Sbjct: 436 AFQLYDNMLGDGLTPDDALYSALVGSLHT 464
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 152/370 (41%), Gaps = 43/370 (11%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
DTA L+ + + P VT + +++ YC V A R V
Sbjct: 47 LDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 104
Query: 141 FQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE---AERVW 196
+ LL A R K+ AE L + ++ I+++G + ++R+ E V+
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDG----LSAARDITKVEAVF 160
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + + DV +S +I+ Y +A N+ + +FD+ GIE + Y A+I+ K
Sbjct: 161 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 220
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A L+ M+ +GV N + +N++I C+ +D+A + M + GI + TY
Sbjct: 221 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 280
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + C +++ +R + N+ ++ + E G
Sbjct: 281 NT--------------------LACG---------LRRANRMDEAKNLLRI---MIEKGV 308
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
P+ SYT LI G + EA + + EM P T ++ D Y K+ R+
Sbjct: 309 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD-GYIKKGSIREAE 367
Query: 437 SLKAHQPQSG 446
K + G
Sbjct: 368 RFKNEMEKKG 377
>gi|222622668|gb|EEE56800.1| hypothetical protein OsJ_06387 [Oryza sativa Japonica Group]
Length = 540
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 178/400 (44%), Gaps = 22/400 (5%)
Query: 15 RSEMRNKIEECGI----KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
R+ + + GI +S E++S V+S A FF WA S S +
Sbjct: 86 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 145
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + F ++ MR P + TL I+I A V AI
Sbjct: 146 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLI---N 199
Query: 131 RFKFAVGI-------EDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGW 182
F +G+ E F L++ LCR +V A L+ ++ + + +N ++ GW
Sbjct: 200 TDHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGW 259
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G + E W M + G+ D VS+ +I +A + L++F++M G
Sbjct: 260 AR-FGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPT 318
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YNA+I I K M + PN+ TY +I+ + RK+ +A Q FD
Sbjct: 319 TMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFD 378
Query: 303 EMLQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWR 359
EML RGI P+ F++ + T G LL + RK GC+ + Y +L+++ + +
Sbjct: 379 EMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLERLAMFG 438
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G V ++W E+ E+G+ D+ Y +++ L GK++ A
Sbjct: 439 KSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAA 478
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EML 305
N VI AL + + ++ M + GV+P++ T +I L AR ++ A Q + +
Sbjct: 144 NIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHF 203
Query: 306 QRGISPTIRTYHAFLDIIR--TGEEVFGLLESMRKMGCQPTND-TYIMLIKKFSRWRQFG 362
G+ T + F +I GL S+ + T D M + W +FG
Sbjct: 204 GLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFG 263
Query: 363 NVFKV---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
V KV W + E+G PD+ SY LI AL + EEA Q + +M + P
Sbjct: 264 RVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCP 317
>gi|218190552|gb|EEC72979.1| hypothetical protein OsI_06882 [Oryza sativa Indica Group]
Length = 541
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 178/400 (44%), Gaps = 22/400 (5%)
Query: 15 RSEMRNKIEECGI----KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
R+ + + GI +S E++S V+S A FF WA S S +
Sbjct: 87 RAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIANSKLPPSVDTCNI 146
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG+ + F ++ MR P + TL I+I A V AI
Sbjct: 147 VIRALGRRKFFAFFEPALEIMRKNGVSPDI---STLEIIIDSLIAARHVNTAIQLI---N 200
Query: 131 RFKFAVGI-------EDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGW 182
F +G+ E F L++ LCR +V A L+ ++ + + +N ++ GW
Sbjct: 201 TDHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGW 260
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G + E W M + G+ D VS+ +I +A + L++F++M G
Sbjct: 261 AR-FGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCPT 319
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YNA+I I K M + PN+ TY +I+ + RK+ +A Q FD
Sbjct: 320 TMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVADALQMFD 379
Query: 303 EMLQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWR 359
EML RGI P+ F++ + T G LL + RK GC+ + Y +L+++ + +
Sbjct: 380 EMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLLERLAMFG 439
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ G V ++W E+ E+G+ D+ Y +++ L GK++ A
Sbjct: 440 KSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAA 479
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-EML 305
N VI AL + + ++ M + GV+P++ T +I L AR ++ A Q + +
Sbjct: 145 NIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVNTAIQLINTDHF 204
Query: 306 QRGISPTIRTYHAFLDIIR--TGEEVFGLLESMRKMGCQPTND-TYIMLIKKFSRWRQFG 362
G+ T + F +I GL S+ + T D M + W +FG
Sbjct: 205 GLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHMYNEVIGGWARFG 264
Query: 363 NVFKV---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
V KV W + E+G PD+ SY LI AL + EEA Q + +M + P
Sbjct: 265 RVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMVHEGYCP 318
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 41/386 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ +TR Y ++ + + +K + A +++EM P +VT I++ YC
Sbjct: 257 KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT---CTIVVNAYCRE 313
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ A+ F + + F+G C +V+ ++N
Sbjct: 314 GRMSGAVRVFESMR----------FKG-------------------CEPNVW-----TYN 339
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ G+CN G +A + +M + G+ DVV+++ +I ++ RL M+
Sbjct: 340 AIVQGFCNA-GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEG 398
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D+ YN +I AL K V +A SL +E +G+ PN VT+N++I LCKA K D
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDV 458
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + M+ G +P TY F++ + + +E ++ M + +P+ Y ++I
Sbjct: 459 ACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R +G ++W ++ G PD +YT + A G+L+EA EMK+ + +
Sbjct: 519 RLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIV 578
Query: 414 EPKTDELLQDWSYNKQFVERQIASLK 439
+ L D + +R + LK
Sbjct: 579 DAMAYNTLIDGHTSIGQTDRAVTILK 604
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 36/326 (11%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGWCNI 185
+ Y+ A + L+ ALCR +++ A+ +L + + + +FN ++ G+C
Sbjct: 118 HMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRT 177
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF-------------- 231
A ++ +M RG D VS++ +I + +A + + L LF
Sbjct: 178 -QQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAAL 236
Query: 232 -----------------DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+MK +G + Y A++ + + ++A ++ M + G+
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---G 331
P VVT ++ C+ ++ A + F+ M +G P + TY+A + +V+
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
LL+ MR+ G +P TY +LI+ G+ F++ + NG D+ +Y LI AL
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK++EA + ++ + + P T
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVT 442
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+++ +I + +L R M R G D +N++I + + ++ A L M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
+G + + V+Y +LI+ C+A ++DEA + F EM Q + D R GEE
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGR-GEEG 249
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+L+ M+++G +PT Y L+ + R ++ K+ NE+ ++G P + T +++A
Sbjct: 250 LCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
G++ A + + M+ K EP W+YN
Sbjct: 310 YCREGRMSGAVRVFESMRFKGC--EPNV------WTYN 339
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 181/440 (41%), Gaps = 49/440 (11%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYHTM 71
+K + +++ ECG++ + ++ D F L + +G A Y+ +
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVL 411
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV--HDVG-----RAIN 124
I L K K D A +L D + P+ VT T+ I C DV I+
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV---INGLCKAGKFDVACTFLENMIS 468
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN----KDVFPFNTKSFNIILN 180
A YA + ++ IE+ LC+ K Q E L F + KDV P +T ++ I++N
Sbjct: 469 AGYAPDTYTYSPFIEN-------LCKTKGSQ--EGLFFIDEMLQKDVKP-STVNYTIVIN 518
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
N A R+W +M +G DVV+++ + Y L + + +MK+
Sbjct: 519 RLFNERNYGL-ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTI 577
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK-----------PL- 288
D YN +I A++++K M PN T+ L++ PL
Sbjct: 578 VDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLK 637
Query: 289 ----CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
K +L + + F+ M + + + RTY + L+ R +EV L+ M++
Sbjct: 638 ATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENL 697
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
D Y L+ F + R + + + + + +G P+ Y L+ L G+ + A +
Sbjct: 698 PLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKE 757
Query: 402 YYMEMKEKQLLPEPKTDELL 421
+ + K E TDE++
Sbjct: 758 IFRSSRWK----EYNTDEIV 773
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + + ++ I+ +S+ R L +V L MK + + +YNA+++ K R+
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRM 716
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA +L+ SM G PN++ Y L+ L + D A++ F + + +
Sbjct: 717 YSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKV 776
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+D IR G + ++ + +M C+P+++TY ML ++
Sbjct: 777 IIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 37/214 (17%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-KVYNAVIHALAKGRLVKDAISLMKSM 269
F +++ +S+ +LRLF M R YNA+I AL + ++ A + M
Sbjct: 96 FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
G P+ T+NSLI C+ ++L+ A F +M RG S +Y A
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAA----------- 204
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
LI+ F + +++ E+++ PD ++ AL+
Sbjct: 205 ---------------------LIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKG 239
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L G+ EE +MKE P + L D
Sbjct: 240 LCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVD 273
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T IL+ A D+ + F K + + + +++A CR NV+ A +
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 162 F-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
C + N ++ ++NG+C I G AE + +M RG+ + + F+ +I Y +
Sbjct: 272 DECVGNGIEPNEHTYGALINGFCKI-GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ K L + M++MGIE D YN + L + + +A +L++ M EKGV PN V+
Sbjct: 331 KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMR 337
Y +LI C + EAR+ F EM G P++ TY+ +D I+ G E M
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K G P +Y L+ + +++ E+ + G+ P+ +YTALI L G+ E
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 398 EAHQYYMEMKEKQLLPE 414
EA Q Y M L P+
Sbjct: 511 EAFQLYDNMLGDGLTPD 527
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y +I K+ + + A L+ +M+ G + + T+ I YC +
Sbjct: 277 NGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM---IDGYCRKNM 333
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V +A+ ++ + + + L L R + +A++L+ K V P N S+
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP-NHVSYT 392
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G EA R++ EM+ G +V+++ ++ Y K ++ + R ++M++
Sbjct: 393 TLISIHCNE-GDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEK 451
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y A++H V A+ L + M+++G PN+V Y +LI L K + +E
Sbjct: 452 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEE 511
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D ML G++P Y A + + T
Sbjct: 512 AFQLYDNMLGDGLTPDDALYSALVGSLHT 540
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 145/352 (41%), Gaps = 42/352 (11%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
DTA L+ + + P VT + +++ YC V A R V
Sbjct: 123 LDTAADLLKQ--AATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALC 180
Query: 141 FQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE---AERVW 196
+ LL A R K+ AE L + ++ I+++G + ++R+ E V+
Sbjct: 181 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDG----LSAARDITKVEAVF 236
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + + DV +S +I+ Y +A N+ + +FD+ GIE + Y A+I+ K
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A L+ M+ +GV N + +N++I C+ +D+A + M + GI + TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + C +++ +R + N+ ++ + E G
Sbjct: 357 NT--------------------LACG---------LRRANRMDEAKNLLRI---MIEKGV 384
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
P+ SYT LI G + EA + + EM P T ++ D K
Sbjct: 385 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKK 436
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 13/372 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+I L KV K + A ++D+M+ P++VT TL I YC + VG+ A
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTL---IDGYCKMGRVGKMYKADA 289
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
K K + F L+ C+ +N+ A + ++ + P ++N ++NG
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP-TVVTYNSLVNGL 348
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
CN G EA+ + EM + +V++++ +I+ Y K + L + LFD + + G+ +
Sbjct: 349 CNE-GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+N ++H K +++A L K M EKG PN TYN LI C+ K++E + +
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467
Query: 303 EMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM RG+ TY+ + + ++ L++ M G +P++ TY +L+ +
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++ + G + +Y LI GKLE+A+ EM EK L+P T E
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587
Query: 420 LLQDWSYNKQFV 431
++++ K F+
Sbjct: 588 IIKEEMMEKGFL 599
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 169/337 (50%), Gaps = 12/337 (3%)
Query: 127 YAYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNG 181
+ YK R K + + F +++ LC+ + A ++ + V+ F N ++N +++G
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD-DMKVWGFWPNVVTYNTLIDG 274
Query: 182 WCNI--IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+C + +G +A+ + EM + + + V+F+ +I + K NL L++F++M+ G+
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL 334
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ YN++++ L + +A L+ M + PNV+TYN+LI CK + L+EAR+
Sbjct: 335 KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARE 394
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
FD + ++G++P + T++ L + G EE F L + M + G P TY LI F
Sbjct: 395 LFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFC 454
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
R + V + NE+ G D +Y LI A + ++A + EM +K L P
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514
Query: 417 TDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T +L + Y + R +L+ + G+ V++
Sbjct: 515 TYNILLN-GYCMEGNLRAALNLRKQMEKEGRWANVVT 550
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 171/376 (45%), Gaps = 32/376 (8%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL-VTKQTLLIL 109
+F W+ ++ +S ++ +L + + +++D GET S+ + +L +
Sbjct: 93 YFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVC 152
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP 169
++CA + + Y + K +G+E F+ + RYK
Sbjct: 153 SGQFCANSIIADMLVLAYV-ENSKTVLGLEAFKR--AGDYRYK----------------- 192
Query: 170 FNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ S N +L+ N G E V+ EM +R I ++++F+ +I+ K L+K
Sbjct: 193 LSVLSCNPLLSALVKENEFGG---VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKA 249
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVK--DAISLMKSMEEKGVAPNVVTYNSL 284
+ D MK G + YN +I K GR+ K A +++K M E V+PN VT+N L
Sbjct: 250 GDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVL 309
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGC 341
I CK L A + F+EM +G+ PT+ TY++ ++ + G+ E LL+ M
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY LI + + + ++++ I + G P+ ++ L+H GK+EEA
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL 429
Query: 402 YYMEMKEKQLLPEPKT 417
M EK LP T
Sbjct: 430 LQKVMLEKGFLPNAST 445
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL K + K M + ++PN++T+N++I LCK KL++A D+M
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258
Query: 307 RGISPTIRTYHAFLD----IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
G P + TY+ +D + R G+ + +L+ M + P + T+ +LI F +
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
KV+ E+ G P +Y +L++ L GKL EA EM L P T
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378
Query: 421 LQDWSYNKQFVE 432
L + K+ +E
Sbjct: 379 LINGYCKKKLLE 390
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 23/408 (5%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET-GPSLVTKQTLLILIRRYCAVHDVG 120
A + R Y+ ++ L K R A+ ++ EMR G++ P LVT T+ I +C ++
Sbjct: 38 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTV---INGFCKQGEMD 94
Query: 121 RAINAFY-AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
RA R A + + ++ LCR + A ++ K V P + +F+
Sbjct: 95 RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP-DKFTFSA 153
Query: 178 ILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ GWCN EA +++ E ++ DVV+++ +I + K+ NL K +++ M+
Sbjct: 154 LITGWCNA-RKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME- 211
Query: 237 MGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G +C V Y++++H L K + A+ L + M KG PNVVTY +LI LC A K+
Sbjct: 212 -GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 270
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
D AR DEM P +Y+A LD R G EE L + M C P TY L
Sbjct: 271 DAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCL 330
Query: 352 IKKFSRWRQFGNV-FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ F + F + N + G PD +Y+ ++ + EA ++ EM +
Sbjct: 331 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 390
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKAH-----QPQSGQNTRVIS 453
+ P T L D V+ + LK +P G VI
Sbjct: 391 VAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIG 438
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 148/348 (42%), Gaps = 20/348 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ L K D A L M P++VT TL I CA H V A
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL---IHGLCAAHKVDAARLLMD 278
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ LL CR +++A+ L K P + ++ ++ G+CN
Sbjct: 279 EMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP-DRITYTCLVRGFCN- 336
Query: 186 IGSSREAERVWME--MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S E R +E + GI DVV++S +++ YS+A+ + +M + +
Sbjct: 337 -ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 395
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+++I L K V A+ ++K+M K V P+V T+NS+I LC+ +DEA +
Sbjct: 396 VTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 455
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT-------NDTYIMLIK 353
M G+ P + TY L+ RTG E + L E MRK + + + LI+
Sbjct: 456 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIR 515
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ R+ V E+ P A++ L G+ EEA +
Sbjct: 516 GLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 44/218 (20%)
Query: 239 IECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR---- 292
+EC V + +I K +K A++ + M E VAPN TYN ++ LCKAR
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK 59
Query: 293 --------------------------------KLDEARQAFDEMLQR-GISPTIRTYHAF 319
++D A + EM+ R GI+P + TY +
Sbjct: 60 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119
Query: 320 LD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+D + R G + ++ M+ G +P T+ LI + R+ K++ EI + +
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Query: 377 -GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PD +YTALI +G LE+A + M+ ++ +P
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 217
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 12/348 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY--CAVHDVGRAINA 125
Y ++I LG+ + D A+ L ++M P+ V +L IR + C + G I
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL---IRNFFKCGRKEDGHKI-- 536
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCN 184
+ R + + + + + ++ L K++ F + +S+ I+++G
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + EA ++ M ++G D +++ +I + K+ ++K +L ++MK G E
Sbjct: 597 A-GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +VI LAK + +A L + + KG+ NVV Y+SLI K ++DEA +E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+Q+G++P + T++ LD + EE+ L +SM+ + C P TY +LI + R+F
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F W E+ + G P+ +YT +I L G + EA + + KEK
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 182/384 (47%), Gaps = 14/384 (3%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D + T F ++ GYA + + T+I + + + D A +L+DEM+ P +V
Sbjct: 215 DSDCMLTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLY 273
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--- 160
+ I + V A F+ K + + ++ LC+ + +A L
Sbjct: 274 N---VCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEH 330
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M NK V P ++N ++ G+ + G +A + ++G VVS++CI+SC +
Sbjct: 331 MDQNKQV-PC-AYAYNTMIMGY-GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ + L+ F++MK+ I + YN +I L K ++ A+ + +M++ G+ PNV+T
Sbjct: 388 KGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMR 337
N ++ LCKA++LD+A F+ + + P TY + ++ + R G +E + L E M
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
P Y LI+ F + + + K++NE+ G PD + +F G++E
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 398 EAHQYYMEMKEKQLLPEPKTDELL 421
+ + E+K +P+ ++ +L
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTIL 590
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 194/440 (44%), Gaps = 51/440 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S + N++ E + + ELV VL ++ D A +F WA + + AH Y++++ ++
Sbjct: 82 SSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRWAERLTDRAHCREAYNSLLMVM 140
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ RKF+ +++EM GPS T + ++ + + A ++ KF
Sbjct: 141 ARTRKFNCLEQILEEMSIAGFGPS---NNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFR 197
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSRE 191
+ L+ AL +D++ ++ + + + N F ++ + G
Sbjct: 198 PAFSAYTNLIGAL---STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFARE-GRVDA 253
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A + EM + DVV ++ I C+ KA + + F +MK G+ D Y ++I
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIG 313
Query: 252 ALAKGRLVKDAISLMKSMEE-----------------------------------KGVAP 276
L K + +A+ L + M++ KG P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLL 333
+VV+YN ++ L + ++DEA + F+EM + I P + TY+ +D++ + G E +
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVR 432
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
++M+ G P T +++ + + ++ + ++ + PD +Y +LI L +
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492
Query: 394 GKLEEAHQYYMEMKEKQLLP 413
G+++EA++ Y +M + +P
Sbjct: 493 GRVDEAYKLYEQMLDANQIP 512
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 155/365 (42%), Gaps = 9/365 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G Y +MI +L K + + A L + M + P T+ I Y
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM---IMGYGMA 353
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSF 175
A + +R + + +LS L R V +A + KD P N ++
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTY 412
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+++ C G A V M G+ +V++ + ++ KA+ L +F+ +
Sbjct: 413 NIMIDMLCKA-GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D Y ++I L + V +A L + M + PN V Y SLI+ K + +
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLI 352
+ + ++EML+ G SP + + ++D + + GE G L + ++ +G P +Y +LI
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++++ + E G D +Y +I +GK+ +A+Q EMK K
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651
Query: 413 PEPKT 417
P T
Sbjct: 652 PTVVT 656
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 41/359 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI +L K K +TA + D M+ P+++T I++ R C + A + F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN---IMVDRLCKAQRLDDACSIFE 468
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGW-CN 184
+ L+ L R+ V +A L + + P ++I N + C
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKC- 527
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + +++ EM + G D++ + + C KA + K LF ++K +G D +
Sbjct: 528 --GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +IH L K +A L +M+E+G + YN++I CK+ K+++A Q
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ----- 640
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
LLE M+ G +PT TY +I ++ +
Sbjct: 641 ---------------------------LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ ++ E G + Y++LI G+++EA+ E+ +K L P T L D
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 136/313 (43%), Gaps = 42/313 (13%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A+ F + K+ G TR Y+T+I K K + A+ L++EM+ P++VT +++
Sbjct: 603 AYELF-YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
+ + R A+ ++ K + GIE
Sbjct: 662 D------GLAKIDRLDEAYMLFEEAK-SKGIE---------------------------- 686
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ +++G+ +G EA + E+ Q+G+ +V +++C++ KA + +
Sbjct: 687 --LNVVIYSSLIDGF-GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L F MK + + Y+ +IH L K R A + M+++G PNV TY ++I
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPT 344
L KA + EA F++ ++G Y+A ++ + + + L E R GC
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 345 NDTYIMLIKKFSR 357
T ++L+ +
Sbjct: 864 TKTCVVLLDSLHK 876
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYH 69
F+H+ E+ ++E G + + + V+ + + L K G+ + Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
++I L K+ + D A+ L +E + ++V +L+ VGR A+
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID------GFGKVGRIDEAYLIM 712
Query: 130 KRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNI 185
+ + + LL AL + + + +A KD+ N +++I+++G C I
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
++ A W EM ++G +V +++ +IS +KA N+ + LF++ K G D +
Sbjct: 773 RKFNK-AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
YNA+I L+ DA L + KG + T L+ L KA +++A
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 19/386 (4%)
Query: 67 EYHTMIAILGKVRKF-DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+++ +++ + ++R++ D +L +M P+ T L ILI +C + V +
Sbjct: 92 QFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT---LNILINCFCLMQHVDLGFSV 148
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIIL 179
+ I F L++ LC+ A L C DV+ + T I+
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTT-----II 203
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG C + G + A + +M + G DVV++S +I K R +++ L +F MK GI
Sbjct: 204 NGLCKM-GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGI 262
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y ++I L K+A +++ M + P++VT++ LI CK + EA+
Sbjct: 263 SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQG 322
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFS 356
M + G+ P + TY++ + EV L + M GC+P +Y +LI +
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++ +++NE+ G P+ SYT LIHA GKL EA + + +M LP+
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442
Query: 417 TDELLQDWSYNKQFVERQIASLKAHQ 442
T +L + + ++ + +A Q
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQ 468
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 16/363 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + T+I L K +F A L D+M P + T T+ I C + +
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTI---INGLCKMGET 212
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + L+ +LC+ + V +A + K + P S+
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISP-TVVSYTS 271
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G C+ +EA + EM+ I D+V+FS +I + K N+ + + M M
Sbjct: 272 LIQGLCSF-SRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM 330
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + YN+++H + V +A L M +G P+V +Y+ LI C +++DEA
Sbjct: 331 GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEA 390
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDI--IRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+Q F+EM+ +G++P +Y HAF + +R E+F + M G P TY +L
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELF---KDMHTNGYLPDLCTYSVL 447
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
++ F + G F+++ + P+ YT LI ++ +G L A + + E+ L
Sbjct: 448 LEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGL 507
Query: 412 LPE 414
P+
Sbjct: 508 QPD 510
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 177/367 (48%), Gaps = 22/367 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y T+I L K+ + A LI +M GE G P +VT TL I C V A++
Sbjct: 199 YTTIINGLCKMGETAAAAGLIKKM--GEVGCQPDVVTYSTL---IDSLCKDRLVNEALDI 253
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F K + + + L+ LC + ++A ++ + ++ P + +F+++++ +C
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP-DIVTFSLLIDIFC 312
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G+ EA+ V M++ G+ +V++++ ++ YS + + +LFD M G + D
Sbjct: 313 KE-GNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDV 371
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ +I+ + + +A L M +G+ PN V+Y +LI C+ KL EAR+ F +
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKD 431
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M G P + TY L+ + G + F L +M+ +P Y +LI +
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ K+++E+ +G PD YT +I+ L G L+EA + + +M+E P
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPP------- 544
Query: 421 LQDWSYN 427
++SYN
Sbjct: 545 -NEFSYN 550
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 148/318 (46%), Gaps = 45/318 (14%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSREAE 193
I F LLSA+ R + DA ++ +K + NT + NI++N +C ++
Sbjct: 90 IIQFNKLLSAIVRMRQYYDA--VISLSKQMELAGLSPNTCTLNILINCFC-LMQHVDLGF 146
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
V ++ + G+ +++F+ +I+ KA + L LFD M G + D Y +I+ L
Sbjct: 147 SVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGL 206
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K A L+K M E G P+VVTY++LI LCK R ++EA F M +GISPT+
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266
Query: 314 RTYHAFL--------------------------DII----------RTGE--EVFGLLES 335
+Y + + DI+ + G E G+L++
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT 326
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M +MG +P TY L+ +S + K+++ + G PD SY+ LI+ + +
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386
Query: 396 LEEAHQYYMEMKEKQLLP 413
++EA Q + EM + L P
Sbjct: 387 IDEAKQLFNEMIHQGLTP 404
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 18/335 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + + Y ++I L ++ A A+++EM P +VT +LI +C
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT---FSLLIDIFCKE 314
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+V A + + L+ V +A L C DVF
Sbjct: 315 GNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF-- 372
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
S++I++NG+C ++ EA++++ EM +G+ + VS++ +I + + L + L
Sbjct: 373 ---SYSILINGYC-MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F M G D Y+ ++ K + A L ++M+ + PN+V Y LI +CK
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDT 347
+ L+ AR+ F E+ G+ P ++ Y ++ + + LE+ RKM GC P +
Sbjct: 489 SGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFS 548
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
Y ++I+ F + + ++ E+ + G D +
Sbjct: 549 YNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 10/371 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G S Y+ ++ L + ++A + + M G+ GP +VT T+ I+ YC V
Sbjct: 206 KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM---IKGYCEV 262
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKS 174
+A A + A + L+ A C + D+ ++ D
Sbjct: 263 GKTRKAFEKLKAMELRNVAPDKITYMTLIQA-CYAEGDFDSCLGLYHEMDEKGLEIPPHV 321
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+++++ G C G E V+ M +G +V ++ +I +K N+ + + LF +M
Sbjct: 322 YSLVIGGLCKD-GKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRM 380
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+ G+E D Y ++++L K + +A+ M+ KGVA N + Y+SLI L K+ ++
Sbjct: 381 KKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRV 440
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
DEA + F EM+++G P Y+A +D + + G +E L + M GC T TY +L
Sbjct: 441 DEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTIL 500
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I R + +W+ + + G P +++ AL L L+GK+ A + EM +
Sbjct: 501 ITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGV 560
Query: 412 LPEPKTDELLQ 422
+PE D+++
Sbjct: 561 IPETAFDDMIN 571
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S N ++ + N+ G E VW M + GI + S++ +++ ++ + R+F+
Sbjct: 181 SSNSLIKSFGNL-GMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEV 239
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ I D YN +I + + A +K+ME + VAP+ +TY +LI+
Sbjct: 240 MENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGD 299
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIM 350
D + EM ++G+ Y + + + G+ V G + E+M GC+ Y
Sbjct: 300 FDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTA 359
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
LI ++ G ++ + + G PD +Y ++++L +G+L+EA +Y
Sbjct: 360 LIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEY 411
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 45/259 (17%)
Query: 120 GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKS 174
G A +KR K G+E + ++++LC+ + +A E++ FC+ N
Sbjct: 368 GNMGEAMLLFKRMK-KEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMF 426
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G G EAER++ EM ++G D ++ +I +K + + L L +M
Sbjct: 427 YSSLIDGLGKS-GRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRM 485
Query: 235 KRMGIECDRKVYN--AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL-------- 284
+ G CD+ VY +I L + ++A++L M +KG+ P + +L
Sbjct: 486 EVDG--CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSG 543
Query: 285 --------------------------IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
I LCKA ++ EA + D ++ RG R
Sbjct: 544 KVARACKILDEMAPMGVIPETAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTV 603
Query: 319 FLDIIRTGEEVFGLLESMR 337
++ +R L+ MR
Sbjct: 604 LINALRKAGNADLALKLMR 622
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
Q+ + + Y + +D++ T + V + ++MG T + LIK F
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
V VW + ENG P SY L++ L + +E A + + M+ ++ P+ T
Sbjct: 197 EVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVT 251
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 182/405 (44%), Gaps = 43/405 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS S E++ +++ + K++KFD +L + M+ L + ILI +C
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN---ILINCFCRRS 129
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
+ A+ + + I LL+ C K + DA L+ ++ + +T +FN
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G + + EA + +M QRG D+V++ +++ K ++ L L +M++
Sbjct: 190 TLIHGLF-LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK 248
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC------- 289
IE D +YN +I L K + + DA +L ME KG+ P+V TYNSLI LC
Sbjct: 249 GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSD 308
Query: 290 ----------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
K KL EA + +DEM++R I P I TY + ++
Sbjct: 309 ASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 322 ---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +E + E M C P TY LIK F + ++ +++ E+S+ G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +Y LI LF G + A + + +M + P+ T +L D
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 182/403 (45%), Gaps = 57/403 (14%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T ++T+I L K A AL+D+M P LVT + + C
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAV---VNGLCKRG 234
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFP 169
D+ A++ ++ K + + ++ LC+YK++ DA L NK DVF
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALF--NKMETKGIRPDVFT 292
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+N+ +++ CN G +A R+ M +R I +VV+FS +I + K L + +
Sbjct: 293 YNS-----LISCLCNY-GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L+D+M + I+ D Y+++I+ + +A + + M K PNVVTYN+LIK C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 290 KARKLDEARQAFDEMLQR-----------------------------------GISPTIR 314
KA++++E + F EM QR G+ P I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY LD + + G E+ + E ++K +P TY ++I+ + + + + ++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
S G P+ YT +I G EEA + EMKE LP+
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 569
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 147/363 (40%), Gaps = 72/363 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA----- 122
Y+T+I L K + D A+AL ++M P + T +L+ + Y D R
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 123 --------------INAFYAYKRFKFAVGIED-------------FQGLLSALCRYKNVQ 155
I+AF + A + D + L++ C + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 156 DAEHL--MFCNKDVFPFNTKSFNIILNGWC----------------------NII----- 186
+A+H+ + +KD FP N ++N ++ G+C N +
Sbjct: 378 EAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 187 -------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G A++++ +M G+ D++++S ++ K L K L +F+ +++ +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D YN +I + K V+D L S+ KGV PNV+ Y ++I C+ +EA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 300 AFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFS 356
F EM + G P Y+ + +R G++ L++ MR G T M+I
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Query: 357 RWR 359
R
Sbjct: 617 DGR 619
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 38/271 (14%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM Q +V F+ ++S +K + V+ L ++M+ + I D YN +I
Sbjct: 63 DAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + + A++++ M + G P++VT +SL+ C ++++ +A D+M++ G
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 182
Query: 311 PTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTY----------------IML 351
P T++ L + E L++ M + GCQP TY + L
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242
Query: 352 IKK-------------------FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+KK +++ + F ++N++ G PD +Y +LI L
Sbjct: 243 LKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCN 302
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G+ +A + M E+++ P T L D
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALID 333
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 12/348 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY--CAVHDVGRAINA 125
Y ++I LG+ + D A+ L ++M P+ V +L IR + C + G I
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL---IRNFFKCGRKEDGHKI-- 536
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCN 184
+ R + + + + + ++ L K++ F + +S+ I+++G
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + EA ++ M ++G D +++ +I + K+ ++K +L ++MK G E
Sbjct: 597 A-GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +VI LAK + +A L + + KG+ NVV Y+SLI K ++DEA +E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+Q+G++P + T++ LD + EE+ L +SM+ + C P TY +LI + R+F
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F W E+ + G P+ +YT +I L G + EA + + KEK
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 182/384 (47%), Gaps = 14/384 (3%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D + T F ++ GYA + + T+I + + + D A +L+DEM+ P +V
Sbjct: 215 DSDCMLTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLY 273
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--- 160
+ I + V A F+ K + + ++ LC+ + +A L
Sbjct: 274 N---VCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEH 330
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M NK V P ++N ++ G+ + G +A + ++G VVS++CI+SC +
Sbjct: 331 MDQNKQV-PC-AYAYNTMIMGY-GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ + L+ F++MK+ I + YN +I L K ++ A+ + +M++ G+ PNV+T
Sbjct: 388 KGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMR 337
N ++ LCKA++LD+A F+ + + P TY + ++ + R G +E + L E M
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
P Y LI+ F + + + K++NE+ G PD + +F G++E
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIE 566
Query: 398 EAHQYYMEMKEKQLLPEPKTDELL 421
+ + E+K +P+ ++ +L
Sbjct: 567 KGRALFQEIKNLGFIPDARSYTIL 590
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 194/440 (44%), Gaps = 51/440 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S + N++ E + + ELV VL ++ D A +F WA + + AH Y++++ ++
Sbjct: 82 SSVENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFRWAERLTDRAHCREAYNSLLMVM 140
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ RKF+ +++EM GPS T + ++ + + A ++ KF
Sbjct: 141 ARTRKFNCLEQILEEMSIAGFGPS---NNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFR 197
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSRE 191
+ L+ AL +D++ ++ + + + N F ++ + G
Sbjct: 198 PAFSAYTNLIGAL---STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFARE-GRVDA 253
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A + EM + DVV ++ I C+ KA + + F +MK G+ D Y ++I
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIG 313
Query: 252 ALAKGRLVKDAISLMKSMEE-----------------------------------KGVAP 276
L K + +A+ L + M++ KG P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLL 333
+VV+YN ++ L + ++DEA + F+EM + I P + TY+ +D++ + G E +
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVR 432
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
++M+ G P T +++ + + ++ + ++ + PD +Y +LI L +
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492
Query: 394 GKLEEAHQYYMEMKEKQLLP 413
G+++EA++ Y +M + +P
Sbjct: 493 GRVDEAYKLYEQMLDANQIP 512
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 9/370 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F K +G Y +MI +L K + + A L + M + P T+ I
Sbjct: 292 FFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM---IM 348
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPF 170
Y A + +R + + +LS L R V +A + KD P
Sbjct: 349 GYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP- 407
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++NI+++ C G A V M G+ +V++ + ++ KA+ L +
Sbjct: 408 NLSTYNIMIDMLCKA-GKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F+ + D Y ++I L + V +A L + M + PN V Y SLI+ K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDT 347
+ ++ + ++EML+ G SP + + ++D + + GE G L + ++ +G P +
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + ++++ + E G D +Y +I +GK+ +A+Q EMK
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 408 EKQLLPEPKT 417
K P T
Sbjct: 647 TKGHEPTVVT 656
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 41/359 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI +L K K +TA + D M+ P+++T I++ R C + A + F
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN---IMVDRLCKAQRLDDACSIFE 468
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGW-CN 184
+ L+ L R+ V +A L + + P ++I N + C
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKC- 527
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + +++ EM + G D++ + + C KA + K LF ++K +G D +
Sbjct: 528 --GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +IH L K +A L +M+E+G + YN++I CK+ K+++A Q
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ----- 640
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
LLE M+ G +PT TY +I ++ +
Sbjct: 641 ---------------------------LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ ++ E G + Y++LI G+++EA+ E+ +K L P T L D
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 136/313 (43%), Gaps = 42/313 (13%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A+ F + K+ G TR Y+T+I K K + A+ L++EM+ P++VT +++
Sbjct: 603 AYELF-YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
+ + R A+ ++ K + GIE
Sbjct: 662 D------GLAKIDRLDEAYMLFEEAK-SKGIE---------------------------- 686
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ +++G+ +G EA + E+ Q+G+ +V +++C++ KA + +
Sbjct: 687 --LNVVIYSSLIDGF-GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L F MK + + Y+ +IH L K R A + M+++G PNV TY ++I
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPT 344
L KA + EA F++ ++G Y+A ++ + + + L E R GC
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 345 NDTYIMLIKKFSR 357
T ++L+ +
Sbjct: 864 TKTCVVLLDSLHK 876
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYH 69
F+H+ E+ ++E G + + + V+ + + L K G+ + Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
++I L K+ + D A+ L +E + ++V +L+ VGR A+
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID------GFGKVGRIDEAYLIM 712
Query: 130 KRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNI 185
+ + + LL AL + + + +A KD+ N +++I+++G C I
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
++ A W EM ++G +V +++ +IS +KA N+ + LF++ K G D +
Sbjct: 773 RKFNK-AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
YNA+I L+ DA L + KG + T L+ L KA +++A
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 167/365 (45%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM +VT L ++
Sbjct: 109 FFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSEVV 166
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R V +AI FY K K + + ++ L +Y V + + M
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHC 226
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP +T +++ +++ +C + G A ++ EM + G+ ++ +I+ + K ++H
Sbjct: 227 FP-DTMTYSALISAFCKL-GRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGA 284
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ D Y +I L K + +A M+ +G P+ V N++I
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
L KA +LD+A + F EM P++ TY+ + + EV E M++ G P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
++ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 404 MEMKE 408
E+KE
Sbjct: 465 QELKE 469
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 159/364 (43%), Gaps = 27/364 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ P T + +LI + + DV A++
Sbjct: 230 TMTYSALISAFCKLGRRDSATQLLNEMKENGMQP---TTKIYTMLITLFFKLDDVHGALS 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
F + + + L+ L + + +A H + C D ++
Sbjct: 287 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD---------TVV 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N N +G + +A +++ EM VV+++ II SK+R +V F++
Sbjct: 338 MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRA-SEVPSWFER 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK GI Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++
Sbjct: 397 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
D A + F E+ + S + R Y + + + G ++ + + M K+GC P Y
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 516
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ +R + E+G PD +SY +++ L G A + MK+
Sbjct: 517 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 576
Query: 411 LLPE 414
+ P+
Sbjct: 577 VRPD 580
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 164/385 (42%), Gaps = 20/385 (5%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S L+S R D + T L K++G +T+ Y +I + K+ A +L +E
Sbjct: 234 SALISAFCKLGRRD---SATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEE 290
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
MR P + T L IR + A + FY +R +++ L +
Sbjct: 291 MRHQYCRPDVFTYTEL---IRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347
Query: 151 YKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
+ DA L + C V +NT I+ + E + M + GI
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNT-----IIKALFESKSRASEVPSWFERMKESGI 402
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
++S +I + K + K + L ++M G Y ++I AL K + A
Sbjct: 403 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 462
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
L + ++E + + Y +IK L KA +LD+A FDEM + G +P + Y+A + +
Sbjct: 463 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 522
Query: 324 RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
RTG +E + M++ GC P ++Y +++ ++ ++ + + ++ PD
Sbjct: 523 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVV 582
Query: 382 SYTALIHALFLNGKLEEAHQYYMEM 406
SY ++ AL G EEA + EM
Sbjct: 583 SYNTVLGALSHAGMFEEAAKLMEEM 607
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC S ++ A+ + K + +F Q+K + + YN++I L
Sbjct: 148 EMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHE 207
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
L M +G P+ +TY++LI CK + D A Q +EM + G+ PT +
Sbjct: 208 GQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKI 267
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + ++V G L E MR C+P TY LI+ + + + + E+
Sbjct: 268 YTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +I+ L G+L++A + + EM + +P
Sbjct: 328 REGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIP 368
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 60/352 (17%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR++ + +EL+ + R D A+ FF + ++ G T + MI LG
Sbjct: 290 EMRHQYCRPDVFTYTELIRGLGKAGRID--EAYHFF-YEMQREGCRPDTVVMNNMINFLG 346
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K + D A L EM PS+VT T++ + RA ++R K +
Sbjct: 347 KAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKAL-----FESKSRASEVPSWFERMKES- 400
Query: 137 GIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
GI + L+ C+ ++ A L+ + K F +C++I + +A
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKAMMLLE------EMDEKGFPPCPAAYCSLIDALGKA 454
Query: 193 ER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+R ++ E+ + ++ +I KA L + +FD+M ++G D Y
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 514
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKG--------------------------------- 273
NA++ LA+ ++ +A+S M+ M+E G
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 574
Query: 274 --VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
V P+VV+YN+++ L A +EA + +EM G + TY + L+ I
Sbjct: 575 STVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-YNAVIHALAKGRLVKDAIS 264
+D ++ +I C ++ ++ +M R I + V+ L ++V AI+
Sbjct: 121 HDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIA 180
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLD-I 322
+ ++ + P YNS+I L + + + ++EM G P TY A +
Sbjct: 181 IFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAF 240
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G + LL M++ G QPT Y MLI F + ++ E+ PD
Sbjct: 241 CKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDV 300
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+YT LI L G+++EA+ ++ EM+ + P+
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD 334
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 3 TLVDILREFSHKRSEMRN---KIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGK 57
T++ L E + SE+ + +++E GI SS S ++ N E A L
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAM-MLLEEMD 433
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y ++I LGK +++D A L E++ G S + + ++I+
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN-CGSS--SARVYAVMIKHLGKAG 490
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ AIN F D + + C DV+ ++N
Sbjct: 491 RLDDAINMF-----------------------------DEMNKLGCAPDVY-----AYNA 516
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G G EA M + G D+ S++ I++ +K H+ + + MK+
Sbjct: 517 LMSGLART-GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 575
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ D YN V+ AL+ + ++A LM+ M G +++TY+S+++ + K
Sbjct: 576 TVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGI---SPT-IRTYHAFLDIIRTGEEVFGLLES 335
TY +LI+ L + E + EM++ I +PT + L + + +
Sbjct: 125 TYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFLNG 394
++ CQPT Y +I Q+G V +++NE+S G+ PD +Y+ALI A G
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ + A Q EMKE + P K +L
Sbjct: 245 RRDSATQLLNEMKENGMQPTTKIYTML 271
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 12/298 (4%)
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILN 180
AF + R + + I F ++S LCR ++ A + KD+ + ++N +++
Sbjct: 178 AFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA---KDIKAWGLAPSVATYNSLID 234
Query: 181 GWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G+C G+ + + EM + GI V+F +I+ Y K N +R+F++MK+ G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I YN++I L V++ + LM+ ME+ G++PN +T+ ++K CK + +A
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
D M +R + P + Y +D R E+ + E+M K G P TY LI F
Sbjct: 355 DWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SR + + + +E+ E G D +Y LI AL G++ +A + EM E L P
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 182/426 (42%), Gaps = 47/426 (11%)
Query: 48 AFTFFLWAGKQSG-YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A+ FL AG+ + ST + ++A L ++ D A P + T T+
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
I C + + +A + K + A + + L+ C+ + H+ K+
Sbjct: 198 ---ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254
Query: 167 VFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ +F +++NG+C ++ A RV+ EM Q+GI VV+++ +IS
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKN-SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 223 NLHKVLRLFDQMKRMG-----------------------------------IECDRKVYN 247
+ + ++L ++M+ +G +E D +Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYT 373
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + ++DA+++ ++M +KG++PNV TYN LI ++ A DEM ++
Sbjct: 374 ILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GI + TY+ + + EV LL+ M ++G +P + TY +I+ F +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+++ + + + +Y I GK++EA+ EM +K L+P T E +++
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 425 SYNKQF 430
K +
Sbjct: 554 MMEKGY 559
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 158/322 (49%), Gaps = 15/322 (4%)
Query: 103 KQTLL--ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
K TL+ +L+R YC + A+ FY K F IE +LS + Q A L
Sbjct: 144 KTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVL 203
Query: 161 MFCNKDVFPFNTKS----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
++F N +S FNI++N C G ++A+ M G+ +VV+++ II
Sbjct: 204 Y---AEMFRMNIRSSLYTFNIMINVLCK-EGKLKKAKEFIGHMETLGVKPNVVTYNTIIH 259
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ + +F MK G+E D YN+ I L K +++A L+ M E G+ P
Sbjct: 260 GHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVP 319
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGL 332
N VTYN+LI C LD+A DEM+ +GI ++ TY+ F+ + R G + +
Sbjct: 320 NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMG-DADNM 378
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
++ MR+ G P T+ +LI + R F + +E+ G P +YT+LI+ L
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438
Query: 393 NGKLEEAHQYYMEMKEKQLLPE 414
+++EA + +++++ LLP+
Sbjct: 439 RNRMKEADALFSKIQQEGLLPD 460
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 186/388 (47%), Gaps = 21/388 (5%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLS--WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K E +E G+K + + ++ +R ++ A F K G Y++
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIF-QTMKDKGLEPDCYTYNSF 292
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I+ L K + + A LI +M G P+ VT L I YC D+ +A YAY+
Sbjct: 293 ISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL---IDGYCNKGDLDKA----YAYRD 345
Query: 132 FKFAVGIE----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ GI + + AL + DA++++ K + P + + NI++NG+C
Sbjct: 346 EMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP-DAVTHNILINGYCRC 404
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G ++ A + EM +GI +V+++ +I K + + LF ++++ G+ D V
Sbjct: 405 -GDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+NA+I + A L+K M+ V P+ +TYN+L++ C+ K++EARQ DEM
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK 523
Query: 306 QRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+RGI P +Y+ + + G+ + F + + M G PT TY LI+ + ++
Sbjct: 524 RRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGE 583
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHAL 390
+ ++ E+ G PD S+Y ++I A+
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 43/393 (10%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ MI +L K K A I M P++VT T+ I +C RA
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTI---IHGHCLRGKFQRAR 271
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
F K + +S LC+ +++A L+ + P N ++N +++G
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVP-NAVTYNALIDG 330
Query: 182 WCN----------------------------------IIGSSREAERVWMEMSQRGICYD 207
+CN + G +A+ + EM ++G+ D
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+ + +I+ Y + + + L D+M GI+ Y ++I+ L K +K+A +L
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFS 450
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
++++G+ P+++ +N+LI C +D A Q EM + P TY+ + R G
Sbjct: 451 KIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE LL+ M++ G +P + +Y LI +S+ + F+V +E+ G P +Y
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYN 570
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
ALI L N + E A + EM K + P+ T
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPDDST 603
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 166/388 (42%), Gaps = 12/388 (3%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM 91
+L+ ++ EA F+L K+ G+ + + M+++ K+ + AW L EM
Sbjct: 150 DLLVRAYCELKKPNEALECFYLI--KEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
SL T I+I C + +A + + + ++ C
Sbjct: 208 FRMNIRSSLYTFN---IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264
Query: 152 KNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
Q A + KD + ++N ++G C G EA + +M + G+ + V+
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKE-GRLEEASGLICKMLEGGLVPNAVT 323
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSM 269
++ +I Y +L K D+M GI YN IHAL +GR+ DA +++K M
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRM-GDADNMIKEM 382
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTG 326
EKG+ P+ VT+N LI C+ A DEM+ +GI PT+ TY + + ++
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+E L +++ G P + LI F++ E+ PD +Y L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ GK+EEA Q EMK + + P+
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPD 530
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+LS C + + D L V T F++++ +C + EA + + ++G
Sbjct: 120 ILSPTCTNRTIFD--ELALARDRVDAKTTLIFDLLVRAYCEL-KKPNEALECFYLIKEKG 176
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
++ + + ++S + K L+ +M RM I +N +I+ L K +K A
Sbjct: 177 FVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAK 236
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ ME GV PNVVTYN++I C K AR F M +G+ P TY++F+ +
Sbjct: 237 EFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G EE GL+ M + G P TY LI + + +E+ G
Sbjct: 297 CKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL 356
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+Y IHALF+ G++ +A EM+EK ++P+ T +L
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 7/274 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y+ I L + A +I EMR P VT ILI YC D
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN---ILINGYCRCGDA 407
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
RA + + L+ L + +++A+ L + + P + FN
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP-DIIVFNA 466
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C G+ A ++ EM + D ++++ ++ Y + + + +L D+MKR
Sbjct: 467 LIDGHC-ANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRR 525
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI+ D YN +I +K +KDA + M G P ++TYN+LI+ LCK ++ + A
Sbjct: 526 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHA 585
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG 331
+ EM+ +GI+P TY + ++ + T +++ G
Sbjct: 586 EELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 230 LFDQMKRMGIECDRK---VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+FD++ D K +++ ++ A + + +A+ ++EKG PN+ T N ++
Sbjct: 130 IFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLS 189
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMG 340
K + A + EM + I ++ T++ ++++ + +E G +E++ G
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETL---G 246
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY +I +F ++ + + G PD +Y + I L G+LEEA
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+M E L+P T L D NK +++ A
Sbjct: 307 GLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 16/319 (5%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
LI C ++ RA+ F A + + L+ LC+ + A +M
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ D++ ++N+++NG C + G +A + + +G DV +F+ +I Y K
Sbjct: 422 CSSDIW-----TYNLVINGLCKM-GCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL 475
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ +++ ++M G+ D YN+V++ L+K +D + ++M EKG PN +TYN
Sbjct: 476 KMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYN 535
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
L + LCKA K++EA DE+L +GI+P ++ + ++ G + R+MG Q
Sbjct: 536 ILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595
Query: 343 ----PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
T TY ++I F+ K++ E+ G PD +Y +I + G +
Sbjct: 596 YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDS 655
Query: 399 AHQYYMEMKEKQLLPEPKT 417
+++ +EM EK +P T
Sbjct: 656 GYKFLLEMIEKGFIPSLTT 674
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 42/345 (12%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T I I+ C + A++ + R + + L+ LC+ NV +AE +
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
N + P + ++N +++G+C +G + AE++ +G D ++ +I+ +
Sbjct: 313 VNGGLEP-DGFTYNTLIDGYCK-MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQND 370
Query: 223 NLHKVLRLF-----------------------------------DQMKRMGIECDRKVYN 247
+ + L LF ++M G D YN
Sbjct: 371 EIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYN 430
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
VI+ L K V DA +LM KG P+V T+N+LI CK K++ Q ++M
Sbjct: 431 LVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSH 490
Query: 308 GISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G++P + TY++ L+ + E++ E+M + GC P TY +L + + +
Sbjct: 491 GVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEA 550
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ +EI G PD S+ +I NG L+ A+Q + M E+
Sbjct: 551 LDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+FP + +FN +L+ C G +E+ER+ ++ ++G+C ++ +F+ I + L
Sbjct: 212 IFP-DVSTFNKLLHTLCKK-GEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ + D + R G+ D YN +I L K V +A + + G+ P+ TYN+LI
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQP 343
CK L A + + +G P TY + ++ + +E+ L + G +P
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
T Y MLIK + ++ NE+SENG D +Y +I+ L G + +A+
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449
Query: 404 MEMKEKQLLPEPKTDELLQDWSYNKQF 430
+ K +P+ T L D Y KQ
Sbjct: 450 NDAIAKGYVPDVFTFNTLID-GYCKQL 475
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAER 194
+ F LL LC+ VQ++E L+ NK + N +FNI + G C G A
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLL--NKVLKKGMCSNLFTFNIFIQGLCRK-GMLSGAMS 272
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ + + G+ DVV+++ +I K N+ + + ++ G+E D YN +I
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYC 332
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K ++++A +++ KG P+ TY SLI LC+ ++D A F+ L +G+ PT+
Sbjct: 333 KMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y+ + + + L+ M +M GC TY ++I + + + N+
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD ++ LI K+E Q +M + P+ T
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVIT 498
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 4/270 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S+N I+N G ++A +V++ M GI DV +F+ I + + + H LRL +
Sbjct: 113 SYNAIMNILVES-GYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNN 171
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + + Y V+ + +A L M G+ P+V T+N L+ LCK +
Sbjct: 172 MVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGE 231
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ E+ + +++L++G+ + T++ F+ + R G +L+S+ + G P TY
Sbjct: 232 VQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNT 291
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + K +++ G PD +Y LI G L+ A + K
Sbjct: 292 LICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG 351
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+P+ T L + ++R +A A
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNA 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 8/257 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY ++T+I K K +T ++++M P ++T ++L + + D+
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ F + L +LC+ V +A L+ NK + P +T SF
Sbjct: 516 ---METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITP-DTVSFAT 571
Query: 178 ILNGWCNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++G+ N G + A +++ M Q + + +++ +I+ +++ +LH +LF +M
Sbjct: 572 IISGFANN-GDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGA 630
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D Y +I + M EKG P++ T+ +I LC ++ E
Sbjct: 631 GGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHE 690
Query: 297 ARQAFDEMLQRGISPTI 313
A M+ GI P +
Sbjct: 691 AVDIIHFMVHNGIVPEV 707
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++NI+ C G EA + E+ +GI D VSF+ IIS ++ +L +L
Sbjct: 530 NKITYNILTESLCKA-GKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQL 588
Query: 231 FDQMKRMG----IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
F +RMG + YN +I+A A+ + L M G AP+ TY +I
Sbjct: 589 F---RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMID 645
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTY 316
C D + EM+++G P++ T+
Sbjct: 646 GFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD--RKVYNAVIHALAKGRL 258
+ G + ++++ CII N + + + RM I+ VY + + +
Sbjct: 33 EDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAE-TRMDIDNSLLEGVYIGAMKSYGRKGK 91
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V++A+ + + M+ P+V++YN+++ L ++ +A + F M GI P + T+
Sbjct: 92 VQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151
Query: 319 FL-DIIRT--GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ RT LL +M GCQ Y ++ F ++++N++ G
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQ 401
PD S++ L+H L G+++E+ +
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESER 237
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/242 (16%), Positives = 95/242 (39%), Gaps = 41/242 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ + L K K + A L+DE+ P V+ T++
Sbjct: 524 EKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII------SGFA 577
Query: 118 DVGRAINAFYAYKR----FKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDV 167
+ G A+ ++R +K + + +++A ++ E L C D
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ ++ ++++G+C I G++ + +EM ++G + +F +I+C +H+
Sbjct: 638 Y-----TYRVMIDGFC-ITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEA 691
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +IH + +V + ++ + ++K VA + L+K
Sbjct: 692 VD-------------------IIHFMVHNGIVPEVVNSISEADKKVVAAPKIVVEDLLKR 732
Query: 288 LC 289
C
Sbjct: 733 SC 734
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 175/374 (46%), Gaps = 18/374 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG + Y T+I L K+ + A L +M P++VT ILI C
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN---ILIDSLCKDKL 250
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V A++ F K + + I + L+ LC ++ ++A L+ + ++ P N +FN
Sbjct: 251 VNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP-NIFTFN 309
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++++ C G EA+ V+ M++ G+ DVV++S ++ YS + + +LFD M
Sbjct: 310 VLVDAICKE-GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D YN +I K + + +A L M +G+ P+ V YN+LI LC+ +L E
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A+ F M G P + TY LD + G + F L M+ +P Y +LI
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILID 488
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + K+++E+ G P+ YT +I+ L G L+EA + + M+ P
Sbjct: 489 AMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPP 548
Query: 414 EPKTDELLQDWSYN 427
+ ++SYN
Sbjct: 549 D--------EFSYN 554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FN ++NG C + G +A + + G V +++ II+ K LF +
Sbjct: 167 TFNTLINGLCKV-GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ G + + YN +I +L K +LV +A+ + M+ K ++P++ TYNSLI+ LC R+
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKM----------- 339
EA +EM I P I T++ +D I + G+ E G+ ++M +M
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 340 ------------------------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
GC+P +Y +LIK + + ++ +++NE+ G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD +Y LIH L G+L EA + M LP+ T +L D
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLD 453
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 5/263 (1%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A V+ +M + G+ D V+F+ +I+ K + + FD + G + Y +I+
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L K A L K MEE G PNVVTYN LI LCK + ++EA F M + ISP
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 312 TIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
I TY++ + + R +E LL M + P T+ +L+ + + V+
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYN 427
++E G PD +Y++L++ L ++ EA + + M K P+ + + L++ +
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 428 KQFVE-RQIASLKAHQPQSGQNT 449
K+ E +Q+ + HQ + N
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNV 411
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M G+ D+ + S +I C+S + + +F +M ++G++ D +N +I+ L K
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
A+ E G P V TY ++I LCK + A F +M + G P + TY+
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + + E + M+ P TY LI+ +R++ + NE++
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
P+ ++ L+ A+ GK+ EA + M E + P+ T L+ +S + VE
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 208 VVSFSCIISCYSKARNLH-KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++ F+ ++S K + V+ L QM+ G+ D + +I + + V A S+
Sbjct: 94 IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
M + G+ P+ VT+N+LI LCK K +A + FD+ G PT+ TY ++ + +
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213
Query: 326 GEEV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
GE GL + M + GCQP TY +LI + + +++ + PD +Y
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+LI L + +EA EM ++P T +L D
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF- 126
Y+++I L R++ A AL++EM P++ T +L+ C V A F
Sbjct: 273 YNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN---VLVDAICKEGKVSEAQGVFK 329
Query: 127 -------------YAYKRFKFAVGIE---------------------DFQGLLSALCRYK 152
Y+ + +++ +E + L+ C+ K
Sbjct: 330 TMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAK 389
Query: 153 NVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+ +A+ L ++ + P N ++N +++G C + G REA+ ++ M G D+ +
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNV-NYNTLIHGLCQL-GRLREAQDLFKNMHSNGNLPDLFT 447
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S ++ + K L K RLF M+ ++ D +YN +I A+ K +KDA L +
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELF 507
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+G+ PNV Y ++I LCK LDEA +AF M G P +Y+ +
Sbjct: 508 VQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCN 164
ILI+ YC + A F ++ L+ LC+ +++A+ L M N
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
++ T ++++L+G+C G +A R++ M + D+ ++ +I K NL
Sbjct: 440 GNLPDLFT--YSMLLDGFCKE-GYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+LF ++ G+ + ++Y +I+ L K L+ +A+ ++ME G P+ +YN +
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556
Query: 285 IKPLCKARKLDEARQAFDEMLQRG 308
I+ + + A Q EM RG
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRG 580
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 168/369 (45%), Gaps = 9/369 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
++ E + LG +KFD A D + S++ + I+I V A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
N F + F++ + + L+SA RY+ + M +D ++N+ILN
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM--EEDGCKPTLITYNVILN 251
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ + + + +M GI D +++ +I+C + + ++F++MK G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D+ YNA++ K K+A+ ++ M G +P++VTYNSLI + LDEA +
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 301 FDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
++M ++G P + TY L R G E + E MR GC+P T+ IK +
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+F + K+++EI+ G PD ++ L+ NG E + EMK +PE +T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 418 -DELLQDWS 425
+ L+ +S
Sbjct: 492 FNTLISAYS 500
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 193/447 (43%), Gaps = 74/447 (16%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G++ S Y+++I+ + D A L ++M T P + T TLL R
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER------ 396
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
G+ +A ++ + A G +C + +A M+ N+ F K F+ I
Sbjct: 397 AGKVESAMSIFEEMRNA-------GCKPNICTF----NAFIKMYGNRGKFTEMMKIFDEI 445
Query: 179 --------LNGWCNII------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ W ++ G E V+ EM + G + +F+ +IS YS+ +
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + ++ +M G+ D YN V+ ALA+G + + + ++ ME+ PN +TY SL
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 285 ------------------------IKP----------LC-KARKLDEARQAFDEMLQRGI 309
I+P +C K L EA +AF E+ +RG
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 310 SPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SP I T ++ + I + V G+L+ M++ G P+ TY L+ SR FG +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWS 425
+ EI G PD SY +I+A N ++ +A + + EM+ ++P+ T + + ++
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 426 YNKQFVERQIASLK---AHQPQSGQNT 449
+ F E I ++ H + QNT
Sbjct: 746 ADSMF-EEAIGVVRYMIKHGCRPNQNT 771
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 156/359 (43%), Gaps = 41/359 (11%)
Query: 20 NKIEECGIKVSSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMI 72
++I CG L ++++W +N ++ + K++G+ ++T+I
Sbjct: 443 DEINVCG------LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR---------YCAVHDVGRAI 123
+ + F+ A + M P L T T+L + R A + GR
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCR--YKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
Y A GL+ +L Y V + ++ K+ +++
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL----------KTL-VLVCS 605
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C+++ EAER + E+ +RG D+ + + ++S Y + + + K + D MK G
Sbjct: 606 KCDLL---PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
YN++++ ++ + +++ + KG+ P++++YN++I C+ ++ +A + F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
EM GI P + TY+ F+ EE G++ M K GC+P +TY ++ + +
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 162/409 (39%), Gaps = 22/409 (5%)
Query: 21 KIEECGIK---VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
K+EE G K ++ ++ V + W T + K G A Y+T+I +
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNK-ITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
A + +EM+ VT LL + Y H A+ F+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV---YGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
I + L+SA R + +A L DVF + T +L+G+ G
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT-----LLSGF-ERAGKVES 402
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A ++ EM G ++ +F+ I Y +++++FD++ G+ D +N ++
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ + + + K M+ G P T+N+LI + ++A + ML G++P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 312 TIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ TY+ L + G E+ +L M C+P TY L+ ++ ++ G + +
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ P L+ L EA + + E+KE+ P+ T
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 167/367 (45%), Gaps = 12/367 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G+++ Y+ ++ + GK + A +++EM PS+VT +L+ R +
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ N A K K V + LLS R V+ A + N P N +
Sbjct: 366 DEAMELKNQM-AEKGTKPDVFT--YTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICT 421
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN + + N G E +++ E++ G+ D+V+++ +++ + + +V +F +M
Sbjct: 422 FNAFIKMYGNR-GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
KR G +R+ +N +I A ++ + A+++ + M + GV P++ TYN+++ L +
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+++ + EM P TY + L G+E+ GL+ S+ + + +L+K
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 355 F----SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
S+ + ++E+ E G PD ++ +++ + +A+ MKE+
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 411 LLPEPKT 417
P T
Sbjct: 660 FTPSMAT 666
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV-GRAINAF 126
Y +++ ++ +L +E+ G P V +TL+++ C+ D+ A AF
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV----CSKCDLLPEAERAF 617
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN--IILNGWC 183
K F+ I ++S R + V A ++ + + F + ++N + ++
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G S E R E+ +GI D++S++ +I Y + + R+F +M+ GI D
Sbjct: 678 ADFGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN I + A + ++AI +++ M + G PN TYNS++ CK + DEA+ ++
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Query: 304 MLQRGISP 311
+ R + P
Sbjct: 795 L--RNLDP 800
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 197/445 (44%), Gaps = 46/445 (10%)
Query: 20 NKIEECGIKVSS-ELVSEVLSWVRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+KI + G+ + + S +L + RN + +AA FL + G + Y +I +
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFL-SMPNKGCLRNEVSYTNLIHGFCE 286
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+ D A L +M P T +T ++I C + A+N F
Sbjct: 287 ARRVDEALKLFSQMHEDNCWP---TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN----------- 184
+ + L+ +LC N DA+ ++ K + P + ++N +++G+C
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP-SVVTYNALIDGYCKKGLSASALEIL 402
Query: 185 ------------------IIGSSR-----EAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
I+G R +A + +M +R + +VV+++ +I K
Sbjct: 403 SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKE 462
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+L +L M G+ D Y+ I L K LV++A SL +S++EKG+ N V Y
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRK 338
++LI CK K+ + R D+ML G P TY++ +D + +E L++ M K
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+P DTY +LI + +F +++++ G+ PD YTA IHA +G+L++
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A +M K ++P+ L D
Sbjct: 643 AEVLICKMNAKGIMPDTMLYTLFID 667
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 190/434 (43%), Gaps = 66/434 (15%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL---GKVRKFDTAWALIDEMRGGETGPSL 100
D + A FF W G++ G+ H+ + + +M+ IL G +R + + MR +
Sbjct: 89 DPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLR-------IAENMRILMIKSTD 141
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-- 158
++ L +L + + R ++AF KF + + + LL L R+ + + +
Sbjct: 142 SSENALFVLE----MLRSMNRRVDAF------KFKLTLRCYNMLLMLLSRFLMIDEMKSV 191
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCN-----------------------------IIGSS 189
+L + V P N + N ++NG+C I+G
Sbjct: 192 YLEMLDDMVTP-NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYC 250
Query: 190 RE-----AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
R A +++ M +G + VS++ +I + +AR + + L+LF QM +
Sbjct: 251 RNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVR 310
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I AL + +A+++ K M EK PNV TY LI LC+ D+A++ + M
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM 370
Query: 305 LQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
L++G+ P++ TY+A +D + + E+ L+ES C P TY LI F R
Sbjct: 371 LEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN---CSPNARTYNELILGFCRG 427
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + +++ E P+ +Y LIH G L A++ M E L+P+ T
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTY 487
Query: 419 ELLQDWSYNKQFVE 432
+ D + VE
Sbjct: 488 SVFIDTLCKRGLVE 501
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 165/415 (39%), Gaps = 50/415 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ R Y+ ++ +L + D ++ EM P++ T T+ + YC + +V A
Sbjct: 168 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTM---VNGYCKLGNVVEA- 223
Query: 124 NAFYAYKRFKFAVGIEDFQ--GLLSALCRYKNVQDAEHLMFC---NKDVFPFNTKSFNII 178
Y K + + ++ F L+ CR KNV DA + +F NK N S+ +
Sbjct: 224 -ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNV-DAANAIFLSMPNKGCLR-NEVSYTNL 280
Query: 179 LNGWCNI----------------------------------IGSSREAERVWMEMSQRGI 204
++G+C +G EA ++ EM+++
Sbjct: 281 IHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHC 340
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
+V +++ +I + N ++ + M G+ YNA+I K L A+
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
++ ME +PN TYN LI C+ + + +A +ML+R + P + TY+ +
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQC 460
Query: 324 RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G+ + LL M + G P TY + I + ++ + E G +
Sbjct: 461 KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQI 435
Y+ LI GK+ + +M +P T + L+ + K F E ++
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 24/352 (6%)
Query: 72 IAILGKVRKFD--TAWALIDEMRGGETGPSLVTKQ-TLLILIRRYCAVHDVGRAINAFYA 128
I I G+ ++ D +A+ L+ M E+G LV + T + I C V A + F +
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMN--ESG--LVPDEWTYSVFIDTLCKRGLVEEARSLFES 509
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNII 186
K + L+ C+ V D L+ + P N+ ++N +++G+C
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP-NSITYNSLIDGYCKE- 567
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+ +EA + M +R I +++ +I K + +FDQM G D +Y
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
A IHA +KDA L+ M KG+ P+ + Y I + +D A M +
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687
Query: 307 RGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR-WRQFGN 363
G P+ TY + + +EV E +ND FS WR+
Sbjct: 688 VGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASND--------FSNCWRRVDY 739
Query: 364 VFK--VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F ++ +++E+G P+ ++Y I L G LE AH+ + MKEK P
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 46/300 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + Y T+I KV K L+D+M P+ +T +L I YC
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL---IDGYCKE 567
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFP 169
+ A + + + L+ L + + D H MF + DVF
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK-DDEFDQAHDMFDQMLSTGSHPDVFI 626
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++ +C+ G ++AE + +M+ +GI D + ++ I Y + ++
Sbjct: 627 YTA-----FIHAYCSH-GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAK-----------------GRLVKD----------- 261
+ +M +G E Y+ +I L+ G D
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740
Query: 262 -AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+ L M E G APN TY I LCK L+ A + FD M ++G SP Y++ L
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 152/408 (37%), Gaps = 83/408 (20%)
Query: 22 IEECGIKVSSELVSEVL-SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRK 80
++E GIK + + S ++ + + + F L +G ++ Y+++I K +
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F A L+D M + P+ T ILI + +A + F +
Sbjct: 570 FKEARLLVDIMIKRDIEPA---ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626
Query: 141 FQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ + A C + ++DAE ++ C K + P +T + + ++ + GS A +
Sbjct: 627 YTAFIHAYCSHGRLKDAE-VLICKMNAKGIMP-DTMLYTLFIDAY-GRFGSIDGAFGILK 683
Query: 198 EMSQRGICYDVVSFSCIISCYSKAR-----------------------------NLHKVL 228
M + G ++SC+I S A+ + L
Sbjct: 684 RMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTL 743
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
LF +M G + Y I L K ++ A L M+EKG +PN YNSL+
Sbjct: 744 DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCS 803
Query: 289 CKARKLDEARQAFDEMLQRGISPTI--------------------RTYHAFLD------- 321
C+ EA + D M++ P + R + +FL
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDE 863
Query: 322 ---------IIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+++ G ++FG++E+ GCQ TY MLI+ F
Sbjct: 864 MVWKVLIDGLLKKGLSDKCSDLFGIMET---QGCQIHPKTYSMLIEGF 908
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 20/361 (5%)
Query: 4 LVDILREF-SHKRS----EMRNKIEECGIKVSSELVSEVL-SWVRNDWEAAFTFFLWAGK 57
L I+R F HK + E+ K E G+ + + + ++ V D K
Sbjct: 734 LSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMK 793
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G YH ++ +GK + + + +EM + VT T+ I
Sbjct: 794 RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI---ISGLVKSK 850
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL----MFCNKDVFPFNTK 173
+ AIN +Y F+ + LL L + N++DAE L + C + N
Sbjct: 851 MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP---NCA 907
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+NI+LNG+ I G + + ++ M ++G+ D+ S++ +I L+ L F Q
Sbjct: 908 IYNILLNGY-RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQ 966
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ MG+E D YN +IH L K +++A+SL ME+KG+APN+ TYNSLI L KA K
Sbjct: 967 LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGK 1026
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
EA + ++E+L +G P + TY+A + + + E F M GC+P + TY+
Sbjct: 1027 AAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQ 1086
Query: 351 L 351
L
Sbjct: 1087 L 1087
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 149 CRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS--REAERVWMEMSQRGI 204
C++K A L+ F N V T S+N ++ C ++ AE ++ EM + G
Sbjct: 742 CKHKEALAAHELVKKFENLGV-SLKTGSYNALI---CGLVDEDLIDIAEELFSEMKRLGC 797
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D ++ I+ K+ + +L++ ++M G + YN +I L K +++ +AI+
Sbjct: 798 DPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 857
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
L + +G +P TY L+ L K +++A FDEML+ G P Y+ L+ R
Sbjct: 858 LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917
Query: 325 TG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
E+V L ESM + G P +Y ++I + + + ++++ G PD
Sbjct: 918 IAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 977
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+Y LIH L +G+LEEA Y +M++K + P
Sbjct: 978 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF +MKR+G + D Y+ ++ A+ K ++D + + + M KG VTYN++I L
Sbjct: 788 LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K++ LDEA + +++ G SPT TY LD +++ G E+ L + M + GC+P
Sbjct: 848 KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +L+ + V +++ + E G PD SYT +I L +G+L + Y+ ++
Sbjct: 908 IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967
Query: 407 KEKQLLPEPKTDELL 421
+ L P+ T LL
Sbjct: 968 TDMGLEPDLITYNLL 982
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 167/399 (41%), Gaps = 57/399 (14%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++CG S VSE+ W A K GY + Y + L +V +
Sbjct: 318 LDKCGDSGDSRSVSEI-------WNAL--------KADGYNDNVVSYTAAVDALCQVGRV 362
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D A + DEM+ P + +L I+ F RF A+ + +
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSL----------------ISGFLKADRFNRALELFNH 406
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
+ H++F N ++ KS G S +A + + M
Sbjct: 407 MNI-----HGPTPNGYTHVLFIN-----YHGKS------------GESLKALKRYELMKS 444
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+GI DVV+ + ++ +K L R+F ++K MGI D Y +I +K +
Sbjct: 445 KGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADE 504
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ + M E AP+V+ NSLI L KA + +EA + F E+ + + PT TY+ L
Sbjct: 505 AMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLA 564
Query: 321 DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G +EV LLE M P TY ++ + + + ++ NG P
Sbjct: 565 GLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMP 624
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D SSY +++ L G+L+EA + +MK K L P+ T
Sbjct: 625 DLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYAT 662
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 167/397 (42%), Gaps = 49/397 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y I +LG+ + + A+ ++ +M P +VT +LI+ C D
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT---VLIQILC---DA 289
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM----FCNKDVFPFNTKSF 175
GR +A + + K + D ++ L + + D+ + D + N S+
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSY 349
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM- 234
++ C + G EA V+ EM Q+GI S++ +IS + KA ++ L LF+ M
Sbjct: 350 TAAVDALCQV-GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408
Query: 235 ----------------------------------KRMGIECDRKVYNAVIHALAKGRLVK 260
K GI D NAV++ LAK +
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A + ++ G++P+ +TY +IK KA DEA + F EM++ +P + ++ +
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Query: 321 DIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D++ G E + + +++M +PT+ TY L+ R + V ++ ++ N
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP 588
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P+ +Y ++ L NG++ A M +P+
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 165/398 (41%), Gaps = 78/398 (19%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
+ +V + S D E A FL +Q H+T + M+ ++ + + D
Sbjct: 66 AGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFD 125
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
L+ +Q + + +C V AVG+E GL SA
Sbjct: 126 ----------LMQRQIIKANVGTFCTVFG----------------AVGVEG--GLRSAPV 157
Query: 150 RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
+++A ++ + + +N + ++ +G+ REA V+ M+ G+ V
Sbjct: 158 ALPVMKEAGIVL----NAYTYNGLIYFLVKSGF------DREAMDVYKAMAADGVVPTVR 207
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++S ++ + K R+ V+ L +M+ G+ + Y I L + +++A +++ M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
EE+G P+VVT LI+ LC A +L +A+ F
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVF---------------------------- 299
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
M+ +P TYI L+ K +V ++WN + +G + SYTA + A
Sbjct: 300 ----WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
L G+++EA + EMK+K ++P Q +SYN
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIP--------QQYSYN 385
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 155/429 (36%), Gaps = 84/429 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y MI K D A + EM P ++ +L+ ++
Sbjct: 478 KAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML------ 531
Query: 117 HDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT 172
+ GR A FY K + LL+ L R V++ L+ N + FP N
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNI 591
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N +L+ C G A + M+ G D+ S++ ++ K L + +F
Sbjct: 592 ITYNTVLDCLCKN-GEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFC 650
Query: 233 QMK------------------RMGI-------------ECDRKVYNAVIHALAKGRLVKD 261
QMK R G+ + D KV + +H+L +G L +D
Sbjct: 651 QMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710
Query: 262 ---------------------------------------AISLMKSMEEKGVAPNVVTYN 282
A L+K E GV+ +YN
Sbjct: 711 GTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYN 770
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKM 339
+LI L +D A + F EM + G P TYH LD + E++ + E M
Sbjct: 771 ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G + T TY +I + + ++ ++ G P +Y L+ L +G +E+A
Sbjct: 831 GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890
Query: 400 HQYYMEMKE 408
+ EM E
Sbjct: 891 EALFDEMLE 899
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 162/377 (42%), Gaps = 39/377 (10%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+++I +L K + + AW + E++ P+ T TLL + R V +V + +
Sbjct: 525 NSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-- 582
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGW 182
F I + +L LC+ V A +++ C D+ +NT + ++ G
Sbjct: 583 -NSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEG- 640
Query: 183 CNIIGSSREAERVWMEMSQRGI-CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
R E WM + + D + I+ + ++ + + L ++ ++
Sbjct: 641 -------RLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALH---TVREYILQP 690
Query: 242 DRKVYNAVIHALAKGRLVKD----AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D KV + +H+L +G L +D +I +++ G+ + + + +I+ CK ++ A
Sbjct: 691 DSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAA 750
Query: 298 RQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ + G+S +Y+A + D+I EE+F M+++GC P TY ++
Sbjct: 751 HELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF---SEMKRLGCDPDEFTYHLI 807
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + + ++ K+ E+ G +Y +I L + L+EA Y ++ +
Sbjct: 808 LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867
Query: 412 LPEPKT-----DELLQD 423
P P T D LL+D
Sbjct: 868 SPTPCTYGPLLDGLLKD 884
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 143/373 (38%), Gaps = 47/373 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + R Y ++ GK R +T L+ EM P++ + I IR +
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYT---ICIR---VLGQA 254
Query: 120 GRAINAFYAYKRFKFAVGIEDFQG---LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR A+ ++ + D L+ LC + DA+ + + K +
Sbjct: 255 GRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTY 314
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I L C G SR +W + G +VVS
Sbjct: 315 ITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS-------------------------- 348
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
Y A + AL + V +A+ + M++KG+ P +YNSLI KA + +
Sbjct: 349 ---------YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + F+ M G +P T+ F++ ++GE + L E M+ G P ++
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLY 459
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + G +V++E+ G PD +YT +I +EA + + EM E + P
Sbjct: 460 GLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP 519
Query: 414 EPKTDELLQDWSY 426
+ L D Y
Sbjct: 520 DVLAMNSLIDMLY 532
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
YH ++ +GK + + + +EM + VT T+ I + AIN +Y
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI---ISGLVKSKMLDEAINLYY 860
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL----MFCNKDVFPFNTKSFNIILNGWC 183
F+ + LL L + N++DAE L + C + N +NI+LNG+
Sbjct: 861 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEP---NCAIYNILLNGY- 916
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G + + ++ M ++G+ D+ S++ +I L+ L F Q+ MG+E D
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN +IH L K +++A+SL ME+KG+APN+ TYNSLI L KA K EA + ++E
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Query: 304 MLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+L +G P + TY+A + + + E F M GC+P + TY+ L
Sbjct: 1037 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS--REAERVWMEMSQRG 203
LC++K A L+ F N V T S+N ++ C ++ AE ++ EM + G
Sbjct: 741 LCKHKEALAAHELVKKFENLGV-SLKTGSYNALI---CGLVDEDLIDIAEELFSEMKRLG 796
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D ++ I+ K+ + +L++ ++M G + YN +I L K +++ +AI
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+L + +G +P TY L+ L K +++A FDEML+ G P Y+ L+
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 324 RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
R E+V L ESM + G P +Y ++I + + + ++++ G PD
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+Y LIH L +G+LEEA Y +M++K + P
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF +MKR+G + D Y+ ++ A+ K ++D + + + M KG VTYN++I L
Sbjct: 788 LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K++ LDEA + +++ G SPT TY LD +++ G E+ L + M + GC+P
Sbjct: 848 KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +L+ + V +++ + E G PD SYT +I L +G+L + Y+ ++
Sbjct: 908 IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967
Query: 407 KEKQLLPEPKTDELL 421
+ L P+ T LL
Sbjct: 968 TDMGLEPDLITYNLL 982
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 166/399 (41%), Gaps = 57/399 (14%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+++CG S VSE+ W A K GY + Y + L +V +
Sbjct: 318 LDKCGDSGDSRSVSEI-------WNAL--------KADGYNDNVVSYTAAVDALCQVGRV 362
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D A + DEM+ P + +L I+ F RF A+ + +
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSL----------------ISGFLKADRFNRALELFNH 406
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
+ H++F N ++ KS G S +A + + M
Sbjct: 407 MNI-----HGPTPNGYTHVLFIN-----YHGKS------------GESLKALKRYELMKS 444
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+GI DVV+ + ++ +K L R+F ++K MGI D Y +I +K +
Sbjct: 445 KGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADE 504
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ + M E AP+V+ NSLI L KA + +EA + F E+ + + PT TY+ L
Sbjct: 505 AMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLA 564
Query: 321 DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G +EV LLE M P TY ++ + + + ++ NG P
Sbjct: 565 GLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMP 624
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D SSY +++ L +L+EA + +MK K L P+ T
Sbjct: 625 DLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYAT 662
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 167/397 (42%), Gaps = 49/397 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y I +LG+ + + A+ ++ +M P +VT +LI+ C D
Sbjct: 236 GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT---VLIQILC---DA 289
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM----FCNKDVFPFNTKSF 175
GR +A + + K + D ++ L + + D+ + D + N S+
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSY 349
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM- 234
++ C + G EA V+ EM Q+GI S++ +IS + KA ++ L LF+ M
Sbjct: 350 TAAVDALCQV-GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408
Query: 235 ----------------------------------KRMGIECDRKVYNAVIHALAKGRLVK 260
K GI D NAV++ LAK +
Sbjct: 409 IHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A + ++ G++P+ +TY +IK KA DEA + F EM++ +P + ++ +
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Query: 321 DIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D++ G E + + +++M +PT+ TY L+ R + V ++ ++ N
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFP 588
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P+ +Y ++ L NG++ A M +P+
Sbjct: 589 PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 165/398 (41%), Gaps = 78/398 (19%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
+ +V + S D E A FL +Q H+T + M+ ++ + + D
Sbjct: 66 AGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFD 125
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
L+ +Q + + +C V AVG+E GL SA
Sbjct: 126 ----------LMQRQIIKANVGTFCTVFG----------------AVGVEG--GLRSAPV 157
Query: 150 RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
+++A ++ + + +N + ++ +G+ REA V+ M+ G+ V
Sbjct: 158 ALPVMKEAGIVL----NAYTYNGLIYFLVKSGF------DREAMDVYKAMAADGVVPTVR 207
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++S ++ + K R+ V+ L +M+ G+ + Y I L + +++A +++ M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
EE+G P+VVT LI+ LC A +L +A+ F
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVF---------------------------- 299
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
M+ +P TYI L+ K +V ++WN + +G + SYTA + A
Sbjct: 300 ----WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDA 355
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
L G+++EA + EMK+K ++P Q +SYN
Sbjct: 356 LCQVGRVDEALDVFDEMKQKGIIP--------QQYSYN 385
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 155/429 (36%), Gaps = 84/429 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y MI K D A + EM P ++ +L+ ++
Sbjct: 478 KAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML------ 531
Query: 117 HDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNT 172
+ GR A FY K + LL+ L R V++ L+ N + FP N
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNI 591
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N +L+ C G A + M+ G D+ S++ ++ K L + +F
Sbjct: 592 ITYNTVLDCLCKN-GEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFC 650
Query: 233 QMK------------------RMGI-------------ECDRKVYNAVIHALAKGRLVKD 261
QMK R G+ + D KV + +H+L +G L +D
Sbjct: 651 QMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710
Query: 262 ---------------------------------------AISLMKSMEEKGVAPNVVTYN 282
A L+K E GV+ +YN
Sbjct: 711 GTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYN 770
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKM 339
+LI L +D A + F EM + G P TYH LD + E++ + E M
Sbjct: 771 ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G + T TY +I + + ++ ++ G P +Y L+ L +G +E+A
Sbjct: 831 GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890
Query: 400 HQYYMEMKE 408
+ EM E
Sbjct: 891 EALFDEMLE 899
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 164/377 (43%), Gaps = 39/377 (10%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+++I +L K + + AW + E++ P+ T TLL + R V +V + +
Sbjct: 525 NSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-- 582
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGW 182
F I + +L LC+ V A +++ C D+ S+N ++ G
Sbjct: 583 -NSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL-----SSYNTVMYG- 635
Query: 183 CNIIGSSREAERVWMEMSQRGI-CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
++ R E WM + + D + I+ + ++ + + L ++ ++
Sbjct: 636 --LVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALH---TVREYILQP 690
Query: 242 DRKVYNAVIHALAKGRLVKD----AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
D KV + +H+L +G L +D +I +++ G+ + + + +I+ LCK ++ A
Sbjct: 691 DSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAA 750
Query: 298 RQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ + G+S +Y+A + D+I EE+F M+++GC P TY ++
Sbjct: 751 HELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF---SEMKRLGCDPDEFTYHLI 807
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + + ++ K+ E+ G +Y +I L + L+EA Y ++ +
Sbjct: 808 LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867
Query: 412 LPEPKT-----DELLQD 423
P P T D LL+D
Sbjct: 868 SPTPCTYGPLLDGLLKD 884
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 143/373 (38%), Gaps = 47/373 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + R Y ++ GK R +T L+ EM P++ + I IR +
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYT---ICIR---VLGQA 254
Query: 120 GRAINAFYAYKRFKFAVGIEDFQG---LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR A+ ++ + D L+ LC + DA+ + + K +
Sbjct: 255 GRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTY 314
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I L C G SR +W + G +VVS
Sbjct: 315 ITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS-------------------------- 348
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
Y A + AL + V +A+ + M++KG+ P +YNSLI KA + +
Sbjct: 349 ---------YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + F+ M G +P T+ F++ ++GE + L E M+ G P ++
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLY 459
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + G +V++E+ G PD +YT +I +EA + + EM E + P
Sbjct: 460 GLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP 519
Query: 414 EPKTDELLQDWSY 426
+ L D Y
Sbjct: 520 DVLAMNSLIDMLY 532
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 4/275 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ ++ I+NG C I G + A ++ +M + G DVV++S II K R +++ L +
Sbjct: 9 DVHTYTTIINGLCKI-GETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F MK GI + YN++I L ++A +++ M + PN+VT++ LI CK
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDT 347
+ EAR M + G+ P + TY + ++ EVF L + M GC+P +
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFS 187
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + ++ G +++NE+ G PD SY LI L G+L EAH + M
Sbjct: 188 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 247
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
LP+ T +L D + ++ + +A Q
Sbjct: 248 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 282
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 45/370 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAVH 117
GY Y T+I L K+ + A L +M GE G P +VT T+ I C
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKM--GEAGCQPDVVTYSTI---IDSLCKDR 59
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
V A++ F K A GI + ++F +N+
Sbjct: 60 RVNEALDIFSYMK----AKGI-------------------------SPNIFTYNS----- 85
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G CN REA + EM I ++V+FS +I+ + K N+ + + M M
Sbjct: 86 LIQGLCNF-SRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM 144
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + Y+++++ + V +A L M KG P+V +YN LI CKA+++ EA
Sbjct: 145 GVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 204
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+Q F+EM+ +G++P I +Y+ +D + + G E L ++M G P TY +L+
Sbjct: 205 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 264
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + F+++ + P+ Y LI A+ + L+EA + + E+ + L P
Sbjct: 265 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324
Query: 415 PKTDELLQDW 424
K +L + W
Sbjct: 325 MKHWKLFEIW 334
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 19/271 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + + Y+++I L ++ A A+++EM P++V T +LI +C
Sbjct: 72 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV---TFSLLINIFCKE 128
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+V A + + L++ V +A L C DVF
Sbjct: 129 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF-- 186
Query: 171 NTKSFNIILNGWCNI--IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
S+NI++NG+C IG EA++++ EM +G+ D+VS++ +I + L +
Sbjct: 187 ---SYNILINGYCKAKRIG---EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
LF M G D Y+ ++ K + A L ++M+ + PN+V YN LI +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
CK+R L EAR+ F E+ +G+ P ++ + F
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 178/398 (44%), Gaps = 47/398 (11%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E++ ++ L K++ + TA +L +M+ P L T L ILI +C + + +
Sbjct: 12 EFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFT---LNILINCFCHLGQMTFSFTVL 68
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ + H F +K V F + S+ +LNG C
Sbjct: 69 GKILKLGYQPNTITLNTLMKGLCLKGEVKKSLH--FHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 184 NIIGSSR-----------------------------------EAERVWMEMSQRGICYDV 208
I G +R EA ++ EM RGI +V
Sbjct: 127 KI-GETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV 185
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++S +I + A L + L ++M I + Y ++ AL K VK+A +L+
Sbjct: 186 ITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV 245
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RT 325
M ++GV PNVV+YN+L+ C ++ A+Q F M+Q+G++P + +Y+ +D + +
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E LL + P TY LI F + + + + E+ G D +YT+
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L+ AL N L++A +M+MKE+ + P T L D
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 171/349 (48%), Gaps = 8/349 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + + A+ L EM P+++T TL I +C + A
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL---IYGFCLAGQLMEAFGLLN 209
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
+ + L+ ALC+ V++A++L+ K+ N S+N +++G+C +I
Sbjct: 210 EMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC-LI 268
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + A++++ M Q+G+ +V S++ +I K++ + + + L ++ + + Y
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+++I K + A+ L+K M +G +VVTY SL+ LCK + LD+A F +M +
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388
Query: 307 RGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RGI P TY A +D + G + L + + GC+ TY ++I +
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDE 448
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ +++ ENG PD ++ +I +LF + ++A + EM K LL
Sbjct: 449 ALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 166/367 (45%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T++ L K+ + +A L+ + T P++V T+ I C V
Sbjct: 110 GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTI---IDGLCKDKLV 166
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + L+ C + +A L+ K++ P N ++ I
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINP-NVYTYTI 225
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EA+ + M++ G+ +VVS++ ++ Y + ++F M +
Sbjct: 226 LMDALCKE-GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + YN +I L K + V +A++L++ + K + PN VTY+SLI CK ++ A
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
EM RG + TY + LD + + ++ L M++ G QP TY LI
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + N K++ + G + +Y +I L G L+EA +M+E +P+
Sbjct: 405 LCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464
Query: 415 PKTDELL 421
T E++
Sbjct: 465 AVTFEII 471
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 4/255 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++ F+ I+ K ++ + LF QM+ GIE D N +I+ + + +++
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G PN +T N+L+K LC ++ ++ D+++ +G +Y L+ + + G
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL + +P Y +I + + + +++E+ G P+ +Y+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
LI+ L G+L EA EM K + P T +L D + K+ ++ +L A +
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD-ALCKEGKVKEAKNLLAVMTK 248
Query: 445 SGQNTRVISKKSDQD 459
G V+S + D
Sbjct: 249 EGVKPNVVSYNTLMD 263
>gi|449446161|ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 168/402 (41%), Gaps = 56/402 (13%)
Query: 22 IEECGIKVSSELVSEVLSW------VRNDWEAA---FTFFLWAGKQSGYAHSTREYHTMI 72
++E +KVS LV EVL V N + A + FF+W+G+ Y H+ YH ++
Sbjct: 99 LDELQLKVSGVLVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIM 158
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAFYAY 129
I + +F W ++DEM E G VT +T +ILI C + G R + F
Sbjct: 159 KIFAECEEFKAMWRVLDEMT--EKGYP-VTARTFMILI---CTCGEAGLAKRVVERFIKS 212
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F F + +L L K + L GW
Sbjct: 213 KTFNFRPYKHSYNAILHGLVIVKQYK-----------------------LIGW------- 242
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
V+ +M D+++++ ++ K L + RL D+M R G D YN +
Sbjct: 243 -----VYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNIL 297
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
++ L KG A++L+ M E G PNV+ + +LI L +A LD + FDE+ G
Sbjct: 298 LYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGC 357
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + Y + E+ + M G P TY +I+ F +F +
Sbjct: 358 IPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYS 417
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ +E+ G P+ Y+ L+ L GKL EAH+ +M E
Sbjct: 418 MLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVE 459
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
RV EM+++G +F +I +A +V+ F + K + YNA++H L
Sbjct: 172 RVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGL 231
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ K + M +P+++TYN L+ CK KLD+ + DEM ++G SP
Sbjct: 232 VIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDF 291
Query: 314 RTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY+ L ++ G++ LL MR++G P + LI SR ++E
Sbjct: 292 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDE 351
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ NG PD YT +I + G+ E+A ++ EM K LP T
Sbjct: 352 LGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFT 398
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 8/249 (3%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y HS Y+ ++ L V+++ + D+M + P ++T LL + +
Sbjct: 220 YKHS---YNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFH 276
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIIL 179
R ++ R F+ + LL L + A +L+ ++V F N F ++
Sbjct: 277 RLLDEM---ARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLI 333
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG G+ + + E+ G DVV ++ +I+ +++A K FD+M G
Sbjct: 334 NGLSRA-GNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQ 392
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ YN++I K+A S++ ME +G PN + Y++L+ L A KL EA +
Sbjct: 393 LPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHK 452
Query: 300 AFDEMLQRG 308
+M++ G
Sbjct: 453 VIKQMVENG 461
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESM 336
V +Y+ ++K + + + DEM ++G T RT F+ +I T E GL + +
Sbjct: 150 TVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTART---FMILICTCGEA-GLAKRV 205
Query: 337 -------RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ +P +Y ++ +Q+ + V++++ + + PD +Y L+ +
Sbjct: 206 VERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFS 265
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
GKL++ H+ EM K P+ T +L
Sbjct: 266 SCKLGKLDQFHRLLDEMARKGFSPDFHTYNIL 297
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE L K+ N ++ ++++G+ NI G EA+R++ EM ++GI DV ++ IIS
Sbjct: 284 AEILTLMEKEGVACNVVTYTLLIHGFSNI-GKIEEAQRLFEEMREKGIEADVYVYTSIIS 342
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
C ++ N+ + L LFD+M G+ Y A+IH + K ++ A L+ M+ KG+
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLL 333
N V +N+LI C++ +DEA + M ++G+ + Y++ L + +E GLL
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
SM + G P ++ LI + + F +V+ E+ E GN P+ +Y LI
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 522
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKT 417
G ++EAH+ E++ + L+P+ T
Sbjct: 523 GNMKEAHKLKDELENRGLIPDVYT 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 7/315 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T +LI + + + A F + + + ++S CR NV+ A L
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+K + P + ++ +++G C G A+ + EM +GI + V F+ +I Y ++
Sbjct: 361 TDKGLIP-SAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 418
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + LRL M++ G+E D YN++ L K +A L+ SM E+GV+PN +++
Sbjct: 419 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM 339
+LI CK EA++ F EM ++G P I TY+ +D + G +E L + +
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P T LI + K+++E+ + G P+ +YTA+I L +G+ EEA
Sbjct: 539 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598
Query: 400 HQYYMEMKEKQLLPE 414
+ Y EMKE L P+
Sbjct: 599 FKLYDEMKETGLTPD 613
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 14/328 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR K E + V + ++S + + + A F + G S Y +I +
Sbjct: 324 EMREKGIEADVYVYTSIIS--CNCRSGNVKRALVLFDEMTDK-GLIPSAHTYGALIHGVC 380
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K + + A L++EM+G + V TL I YC V A+ ++
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTL---IDGYCESGMVDEALRLQVVMEKKGLES 437
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ + + S LC+ +A+ L+F + V P NT SF +++ +C G+ EA+R
Sbjct: 438 DVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP-NTMSFTTLIDIYCKE-GNFVEAKR 495
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ EM ++G ++++++ +I YSK N+ + +L D+++ G+ D ++IH
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 555
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V A+ L M ++G+ PNVVTY ++I L K + +EA + +DEM + G++P
Sbjct: 556 IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 615
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
Y + + + + +E SM+ G Q
Sbjct: 616 VYSSLVGSLHSADESI----SMQIQGSQ 639
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 150/379 (39%), Gaps = 43/379 (11%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
+L R Y G A+ AF ++ F + L AL R V N
Sbjct: 164 LLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL 223
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DV S I+L+G C G ++ E++ +G+ +VV+++ I Y K +L
Sbjct: 224 DV-EVTVYSLTIVLDGLCKR-GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
V + M++ G+ C+ Y +IH + +++A L + M EKG+ +V Y S+I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
C++ + A FDEM +G+ P+ TY A + + + G E L+ M+ G
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKV---------------WNEIS--------------- 372
+ LI + ++ +N I+
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461
Query: 373 -----ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
E G P+ S+T LI G EA + + EM+EK +P T +L D Y+
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID-GYS 520
Query: 428 KQFVERQIASLKAHQPQSG 446
K+ ++ LK G
Sbjct: 521 KRGNMKEAHKLKDELENRG 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F + Y+ + + L F+ M++ G D + + AL +G V + + M
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
V V + ++ LCK ++ R+ DE+ +G+ + TY+AF++ ++
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 331 G---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
G +L M K G TY +LI FS + +++ E+ E G D YT++I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+G ++ A + EM +K L+P T
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHT 371
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 184/378 (48%), Gaps = 11/378 (2%)
Query: 51 FFLWAG-KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
++W G K++G S Y+ ++ L ++A +++ M G+ GP +VT T+
Sbjct: 152 LWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTM--- 208
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDV 167
I+ YC V +A F + A + L+ A C + D ++ +++
Sbjct: 209 IKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQA-CYAEGDFDLCLSLYHEMDENG 267
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
++++++ G C G E V+ +M Q+G +V ++ +I +K N+ +
Sbjct: 268 LEIPPHAYSLVIGGLCKE-GKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEA 326
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ LF++MK+ G+E D Y V++ + K + +A+ ++ GVA N + Y+SLI
Sbjct: 327 MLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDG 386
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
L KA ++ EA + F+EM+++G P Y+A +D + + G +E + M GC T
Sbjct: 387 LGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQT 446
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY ++I R + K+W+ + + G P +++ AL L L+GK+ A +
Sbjct: 447 VYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLD 506
Query: 405 EMKEKQLLPEPKTDELLQ 422
E+ ++PE +++L
Sbjct: 507 ELAPMGVIPETAFEDMLN 524
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 178/391 (45%), Gaps = 14/391 (3%)
Query: 27 IKVSSELVSEVLSW--VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
IK+S VS VL ++ + A FF WAGKQ Y H+ + Y + I +L D
Sbjct: 57 IKLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNV 116
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
++ + RG L+ LI+ + ++ V + + K + + L
Sbjct: 117 KSVFCKFRGMGF---LMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFL 173
Query: 145 LSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ L ++ AE ++ N + P + ++N ++ G+C +G +++A + +M R
Sbjct: 174 LNGLVNSVFIESAERVLEVMENGKIGP-DVVTYNTMIKGYCQ-VGKTQKAFEKFRDMELR 231
Query: 203 GICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+ D +++ +I +CY++ + L L+ +M G+E Y+ VI L K +
Sbjct: 232 NVAPDKITYMTLIQACYAEG-DFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVE 290
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
++ + M +KG NV Y +LI K + EA F+ M + G+ P + TY ++
Sbjct: 291 GYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVN 350
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ ++G +E LE R G Y LI + + K++ E+ + G P
Sbjct: 351 CMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPP 410
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
D Y ALI AL GK +EA ++ M+++
Sbjct: 411 DSYCYNALIDALAKCGKTDEALAFFKRMEDE 441
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 47/306 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCA 115
++G Y +I L K K +A+ ++M +G + ++ T LI
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTA-----LIDSNAK 319
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKS 174
++G A+ F K+ + + +++ +C+ + +A E+L FC + N
Sbjct: 320 CGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAML 379
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G G EAE+++ EM ++G D ++ +I +K + L F +M
Sbjct: 380 YSSLIDGL-GKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438
Query: 235 KRMGIECDRKVYN--AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL-------- 284
+ G CD+ VY +I+ L + ++A+ + M +KG+ P + +L
Sbjct: 439 EDEG--CDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSG 496
Query: 285 --------------------------IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ LCKA ++ EA + D + RG R
Sbjct: 497 KVARACKLLDELAPMGVIPETAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTV 556
Query: 319 FLDIIR 324
++ +R
Sbjct: 557 LINALR 562
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 8/277 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC Q+A L+ D P + S+ ++NG+ G S +A + EM
Sbjct: 172 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE-GDSDKAYSTYHEM 230
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
R I +VV++S II+ KA+ + K + + + M + G+ D Y++++H
Sbjct: 231 LGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQP 290
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+ I + M GV PNVVTY SL+ LCK + +AR+ FD M +RG+ P I TY
Sbjct: 291 KEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTL 350
Query: 320 LDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L T E+ LL+ M + G QP + + +LI +++ + V++++ ++G
Sbjct: 351 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ Y +I L +G +++A Y+ +M ++ L P
Sbjct: 411 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 447
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 9/260 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+I K D A++ EM G P++VT ++ I C
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSI---IAALCKA 252
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK---DVFPFNTK 173
+ +A+ + + +L C + Q E + NK D N
Sbjct: 253 QAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYC--SSGQPKEDIGTLNKMRSDGVEPNVV 310
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++N C G +A +++ M++RG+ D+ ++ ++ Y+ L ++ L D
Sbjct: 311 TYRSLMNYLCKN-GRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 369
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R GI+ D V+N +I A AK V A+ + M + G+ PNVV Y ++I LCK+
Sbjct: 370 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 429
Query: 294 LDEARQAFDEMLQRGISPTI 313
+D+A F++M+ G++P I
Sbjct: 430 VDDAMLYFEQMIDEGLTPNI 449
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 151/384 (39%), Gaps = 59/384 (15%)
Query: 84 AWALIDEM-RGG--ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
A +L + M R G E P L T ILI C + A + F V
Sbjct: 76 AVSLFNRMARAGADEVTPDLCTYS---ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 132
Query: 141 FQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F LL LC K DA ++ C DVF S I+L G C+ S E
Sbjct: 133 FAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF-----SCTILLKGLCDENRSQEALE 187
Query: 194 RVWMEMSQRGICY--DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+ M RG DVVS++ +I+ + K + K
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK------------------------- 222
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
A S M + ++PNVVTY+S+I LCKA+ +D+A + + M++ G+ P
Sbjct: 223 ----------AYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 272
Query: 312 TIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY + L +G+ E G L MR G +P TY L+ + + K++
Sbjct: 273 DCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIF 332
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+ +++ G PD ++Y L+ G L E H M + P+ +L +Y K
Sbjct: 333 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI-CAYAK 391
Query: 429 QFVERQIASLKAHQPQSGQNTRVI 452
Q Q + + Q G N V+
Sbjct: 392 QEKVDQAMLVFSKMRQHGLNPNVV 415
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 7/214 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA L K + D A +++ M P +T ++L YC+ I
Sbjct: 242 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSIL---HGYCSSGQPKEDIGTLN 298
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + ++ L++ LC+ A + + + P + ++ +L G+
Sbjct: 299 KMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEP-DIATYRTLLQGYATK 357
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E + M + GI D F+ +I Y+K + + + +F +M++ G+ +
Sbjct: 358 -GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
Y VI L K V DA+ + M ++G+ PN++
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 182/403 (45%), Gaps = 57/403 (14%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T ++T+I L K A ALID M P L T T ++ C
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT---VVNGLCKRG 235
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--------DVFP 169
D+ A++ ++ K + + ++ LC+YK++ DA L NK DVF
Sbjct: 236 DIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLF--NKMETKGIKPDVFT 293
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+N+ +++ CN G +A R+ +M +R I +VV+F+ +I ++K L + +
Sbjct: 294 YNS-----LISCLCN-YGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD+M + I+ + YN++I+ + +A + M K P+VVTYN+LIK C
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407
Query: 290 KARKLDEARQAFDEMLQR-----------------------------------GISPTIR 314
KA++++E + F EM QR G+ P I
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY LD + + G E+ + E ++K +P TY ++I+ + + + + ++ +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
S G P+ YT +I G EEA + EMKE LP+
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 570
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H+ Y ++ + + A A++ +M P +VT +LL YC +
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL---NGYCHGKRI 167
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
A+ + F L+ L + +A L+ C D+F + T
Sbjct: 168 SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT- 226
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NG C G A + +M + I +VV ++ II K +++ LF++
Sbjct: 227 ----VVNGLCKR-GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ D YN++I L DA L+ M E+ + PNVVT+NSLI K K
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDT 347
L EA + FDEM+QR I P I TY++ + D + +++F L+ S C P T
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS---KDCLPDVVT 398
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LIK F + ++ +++ E+S+ G + +Y LI LF G + A + + +M
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Query: 408 EKQLLPEPKTDELLQD 423
+ P+ T +L D
Sbjct: 459 SDGVPPDIITYSILLD 474
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 14/374 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + D A+ L ++M P + T +L+ + Y D R ++
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + F L+ A + + +AE L + + P N ++N ++NG+C +
Sbjct: 319 ERK---INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-NIVTYNSLINGFC-M 373
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA++++ M + DVV+++ +I + KA+ + + + LF +M + G+ +
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I L + A + K M GV P+++TY+ L+ LCK KL++A F+ +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ + P I TY+ ++ + + G E+ + L S+ G +P Y +I F R
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE--- 419
++ E+ E+G PD Y LI A +G + + EM+ + + T
Sbjct: 554 EADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613
Query: 420 -LLQDWSYNKQFVE 432
+L D K ++E
Sbjct: 614 NMLHDGRLEKSYLE 627
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI ++ ++S +++C+ + L L + +M ++G E D +++++ G+
Sbjct: 106 QMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 165
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ +A++L+ M E G P+ VT+N+LI L K EA D M+ RG P + TY
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ + + G + LL+ M K + Y +I +++ + F ++N++
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER 433
G PD +Y +LI L G+ +A + +M E+++ P T + L+ ++ + +E
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345
Query: 434 Q 434
+
Sbjct: 346 E 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 49/366 (13%)
Query: 3 TLVDILREFSHKRS--EMRNKIEECGIKVSSELVSEVLSWVRN--DWEAAFTFFLWAGKQ 58
T++D L ++ H ++ NK+E GIK + ++S + N W A + L +
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDA-SRLLSDMIE 319
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+ ++++I K K A L DEM P++VT +L I +C
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL---INGFCMHDR 376
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+ A F + + L+ C+ K V++ L ++ NT ++N
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G G A++++ +M G+ D++++S ++ K L K L +F+ +++
Sbjct: 437 LIQGLFQA-GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY---------------- 281
+E + YN +I + K V+D L S+ KGV PNV+ Y
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 282 -------------------NSLIKPLCKARKLDEARQA--FDEMLQRGISPTIRTYHAFL 320
N+LI+ + R D+A A EM G T +
Sbjct: 556 DALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613
Query: 321 DIIRTG 326
+++ G
Sbjct: 614 NMLHDG 619
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DA++L M + P+++ ++ L+ + K K D ++M GI TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L+ ++ +L M K+G +P T L+ + ++ + +++ E G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD ++ LIH LFL+ K EA M + P+
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 220
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYI 349
KLD+A F EM++ P+I + L I + V L E M+ +G + TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+L+ F R Q V ++ + G PD + ++L++ ++ EA +M E
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 410 QLLPEPKT 417
P+ T
Sbjct: 181 GYKPDTVT 188
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 192/420 (45%), Gaps = 26/420 (6%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+ M + +E+ +SSE+V++V+ R E F FF+W ++ + S ++ +I +L
Sbjct: 49 NPMEDALEKLAPFLSSEIVNDVMREQRRP-ELGFRFFIWTTRRRSF-RSWVTHNLVIDML 106
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K FDT W +++E++ + T +LI Y +A+ +F K F
Sbjct: 107 AKDDGFDTYWKILEELKNSNIQ---IPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCK 163
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCN------KDVFPFNTKSFNIILNGWCNIIGSS 189
+ + +L + VQ L+ K + N +F I+LNG C G +
Sbjct: 164 PDVFTYNSILHVM-----VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCK-NGKT 217
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+A +++ EM+Q+GI + + ++ I+S +A+ V RL + MK G D NA+
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ K + +A +L++ E++G + Y+SLI L +A++ DE ++ +M + GI
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337
Query: 310 SPTIRTYHAFLDIIRTGEEV------FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P + Y +IR EV +L M + G P Y LIK F
Sbjct: 338 EPDVVLYTI---LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ EIS+N P +YT LI + NG L+EA Q + +M+ P T L D
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 181/426 (42%), Gaps = 61/426 (14%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEA---------AFTF 51
AK ++++LR+ + R + E +++S LV EVL + A+ F
Sbjct: 84 AKRVLEVLRQ-DGPGLDARLVLGELHVRLSGLLVREVLFGILKHINCENKTRCAKLAYKF 142
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F+W +Q GY H+ YH ++ I + +F W L+DEM E G T +T ILIR
Sbjct: 143 FVWCSQQEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMV--EKGLP-ATARTFNILIR 199
Query: 112 RYCAVHDVGRA-INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
C + ++ + F K F F PF
Sbjct: 200 T-CGEAGLAKSLVERFIKSKTFNFR---------------------------------PF 225
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
S+N IL+G ++ + E V+ ++ G D+++++ ++ + L + RL
Sbjct: 226 K-HSYNAILHGLL-VLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRL 283
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D+M R G D +N ++H L KG A++L+ M E G+ P V+ + +LI L +
Sbjct: 284 LDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSR 343
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQP 343
A LD + FDEM++ G P + Y ++ TG V G +E KM P
Sbjct: 344 AGNLDACKYFFDEMIKNGCIPDVVAY----TVMITGYVVAGEIEKALKMYQYMISREQVP 399
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +I+ +F + E+ G P+ Y L L GK +AH+
Sbjct: 400 NVFTYNSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVI 459
Query: 404 MEMKEK 409
+M EK
Sbjct: 460 RQMTEK 465
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 184 NIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
NI E + +W EM ++G+ +F+ +I +A ++ F + K
Sbjct: 164 NIYAECEEFKALWRLVDEMVEKGLPATARTFNILIRTCGEAGLAKSLVERFIKSKTFNFR 223
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEK----GVAPNVVTYNSLIKPLCKARKLDE 296
+ YNA++H L LV + L++ + ++ G + +++TYN ++ + KLD+
Sbjct: 224 PFKHSYNAILHGL----LVLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQ 279
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIK 353
+ DEM + G SP T++ L ++ G++ LL MR+MG +PT + LI
Sbjct: 280 FHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLID 339
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SR ++E+ +NG PD +YT +I + G++E+A + Y M ++ +P
Sbjct: 340 GLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVP 399
Query: 414 EPKT-DELLQDWSYNKQFVE 432
T + ++Q +F E
Sbjct: 400 NVFTYNSIIQGLCMAGKFDE 419
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 14/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G P+ V ++I C V
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN---MIIDNMCKAKLV 217
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSF 175
A + + + + + L+S + A L NK ++ P N +F
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF--NKMKKENINP-NVYTF 274
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+++G+C G +A+ V M + I DVV+++ ++ Y ++K +FD M
Sbjct: 275 NILVDGFCKE-GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ + ++Y +++ K ++V +AI+L + M + + PNVVTY+SLI LCK ++
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
A + DEM RG P I TY + LD + V LL +++ G +P TY +LI
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K + + + V+ ++ G D +YT +I G ++A +M++ +
Sbjct: 454 KGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI 513
Query: 413 PEPKTDELL 421
P KT EL+
Sbjct: 514 PNAKTYELV 522
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FN ++ G C + G +A ++ +G D VS+ +I+ K + L+L +
Sbjct: 133 TFNTLIKGLC-LKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKR 191
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ ++ + +YN +I + K +LV DA L M K + P+V TYN+LI K
Sbjct: 192 VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSK 251
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
L+ A F++M + I+P + T++ +D + G+ + +L M K +P TY
Sbjct: 252 LNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNS 311
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ + + +++ ++ G + YT +++ ++EA + EM+ ++
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 411 LLPEPKTDELLQD 423
++P T L D
Sbjct: 372 IIPNVVTYSSLID 384
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 114/236 (48%), Gaps = 4/236 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FNI++N + + G + + ++ ++ ++G ++F+ +I ++H+ L D+
Sbjct: 98 TFNILINCFSQL-GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDK 156
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G D+ Y +I+ L K + A+ L+K ++ K V PN V YN +I +CKA+
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIM 350
+++A + +M+ + I P + TY+A + ++ L M+K P T+ +
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
L+ F + + + V + ++ PD +Y +L+ K+ +A + M
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F+ I+S KA++ L L QM+ GIE D +N +I+ ++ L + S+ +
Sbjct: 64 FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+KG P +T+N+LIK LC + +A D+++ +G +Y ++ + +
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 331 GLLESMRKMG---CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L+ ++++ QP Y M+I + + + F +++++ PD +Y ALI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
KL A + +MK++ + P T +L D
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 44/268 (16%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K + A ++ M + P +VT +L+ YC+++ V +A + F + ++
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLM---DGYCSINKVNKAKDIFDSMASGGVIANVQ 342
Query: 140 DFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ +++ C+ K V +A +L M C K + P N +++ +++G C + G A ++
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRK-IIP-NVVTYSSLIDGLCKL-GRIFYALKLV 399
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK- 255
EM RG ++V++S I+ K ++ K + L +K GI D Y +I L +
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459
Query: 256 GRL----------------------------------VKDAISLMKSMEEKGVAPNVVTY 281
GRL A++L+ ME+ G PN TY
Sbjct: 460 GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTY 519
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGI 309
+I L + + D A + EM+ RG+
Sbjct: 520 ELVILSLFEKDENDTAEKLLREMIVRGL 547
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE L K+ N ++ ++++G+ NI G EA+R++ EM ++GI DV ++ IIS
Sbjct: 280 AEILTLMEKEGVACNVVTYTLLIHGFSNI-GKIEEAQRLFEEMREKGIEADVYVYTSIIS 338
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
C ++ N+ + L LFD+M G+ Y A+IH + K ++ A L+ M+ KG+
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLL 333
N V +N+LI C++ +DEA + M ++G+ + Y++ L + +E GLL
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 458
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
SM + G P ++ LI + + F +V+ E+ E GN P+ +Y LI
Sbjct: 459 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 518
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKT 417
G ++EAH+ E++ + L+P+ T
Sbjct: 519 GNMKEAHKLKDELENRGLIPDVYT 542
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR K E + V + ++S + + + A F + G S Y +I +
Sbjct: 320 EMREKGIEADVYVYTSIIS--CNCRSGNVKRALVLFDEMTDK-GLIPSAHTYGALIHGVC 376
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K + + A L++EM+G + V TL I YC V A+ ++
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTL---IDGYCESGMVDEALRLQVVMEKKGLES 433
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ + + S LC+ +A+ L+F + V P NT SF +++ +C G+ EA+R
Sbjct: 434 DVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP-NTMSFTTLIDIYCKE-GNFVEAKR 491
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ EM ++G ++++++ +I YSK N+ + +L D+++ G+ D ++IH
Sbjct: 492 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 551
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V A+ L M ++G+ PNVVTY ++I L K + +EA + +DEM + G++P
Sbjct: 552 IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 611
Query: 315 TYHAFLDIIRTGE 327
Y + + + + E
Sbjct: 612 VYSSLVGSLHSAE 624
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 42/326 (12%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T +LI + + + A F + + + ++S CR NV+ A L
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+K + P + ++ +++G C G A+ + EM +GI + V F+ +I Y ++
Sbjct: 357 TDKGLIP-SAHTYGALIHGVCKA-GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 414
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + LRL M++ G+E D YN++ L K +A L+ SM E+GV+PN +++
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--------------------- 321
+LI CK EA++ F EM ++G P I TY+ +D
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534
Query: 322 ----------IIRTGEEVFG-------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
+ GE + G L + M + G P TY +I S+ +
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594
Query: 365 FKVWNEISENGNGPDRSSYTALIHAL 390
FK+++E+ E G PD + Y++L+ +L
Sbjct: 595 FKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 150/379 (39%), Gaps = 43/379 (11%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
+L R Y G A+ AF ++ F + L AL R V N
Sbjct: 160 LLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNL 219
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DV S I+L+G C G ++ E++ +G+ +VV+++ I Y K +L
Sbjct: 220 DV-EVTVYSLTIVLDGLCKR-GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
V + M++ G+ C+ Y +IH + +++A L + M EKG+ +V Y S+I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
C++ + A FDEM +G+ P+ TY A + + + G E L+ M+ G
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKV---------------WNEIS--------------- 372
+ LI + ++ +N I+
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457
Query: 373 -----ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
E G P+ S+T LI G EA + + EM+EK +P T +L D Y+
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID-GYS 516
Query: 428 KQFVERQIASLKAHQPQSG 446
K+ ++ LK G
Sbjct: 517 KRGNMKEAHKLKDELENRG 535
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F + Y+ + + L F+ M++ G D + + AL +G V + + M
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
V V + ++ LCK ++ R+ DE+ +G+ + TY+AF++ ++
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 331 G---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
G +L M K G TY +LI FS + +++ E+ E G D YT++I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+G ++ A + EM +K L+P T
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHT 367
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 155/325 (47%), Gaps = 15/325 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C A++ F + + + L+ LC D ++ +
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
++ P + +F+ +++ + G EA+ ++ EM RGI D ++++ +I + K LH
Sbjct: 339 NIIP-DVVTFSALIDVFVKE-GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ ++FD M G E D Y+ +I++ K + V D + L + + KG+ PN +TYN+L+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
C++ KL+ A++ F EM+ RG+ P++ TY LD + GE + + E M+K
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 516
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
Y ++I + + + ++ +S+ G PD +Y +I L G L EA
Sbjct: 517 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 576
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYN 427
+ +MKE P+ D++YN
Sbjct: 577 FRKMKEDGCTPD--------DFTYN 593
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 22/376 (5%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAV 116
+G H MI + +K A++++ R + G P +T TL + +C
Sbjct: 128 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLG--RAWKLGYEPDTITFSTL---VNGFCLE 182
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTK 173
V A+ K + L++ LC V +A L+ ++ V F +
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA--LVLIDRMVEYGFQPDEV 240
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +LN C G+S A ++ +M +R I VV +S +I K + L LF++
Sbjct: 241 TYGPVLNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 299
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ D Y+++I L D +++ M + + P+VVT+++LI K K
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
L EA++ ++EM+ RGI+P TY++ +D + ++F L+ S GC+P T
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS---KGCEPDIVT 416
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + ++ + +++ EIS G P+ +Y L+ +GKL A + + EM
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476
Query: 408 EKQLLPEPKTDELLQD 423
+ + P T +L D
Sbjct: 477 SRGVPPSVVTYGILLD 492
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 15/348 (4%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRND--WE-AAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
N++E GIK S ++ + ND W+ A G+ + +I +
Sbjct: 298 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN--IIPDVVTFSALIDVFV 355
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K K A L +EM P +T +L I +C + + A F
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSL---IDGFCKENCLHEANQMFDLMVSKGCEP 412
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
I + L+++ C+ K V D L +K + P NT ++N ++ G+C G A+
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQS-GKLNAAKE 470
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ EM RG+ VV++ ++ L+K L +F++M++ + +YN +IH +
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V DA SL S+ +KGV P+VVTYN +I LCK L EA F +M + G +P
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 590
Query: 315 TYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
TY+ + G + L+E M+ G + T M+I S R
Sbjct: 591 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 638
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 6/253 (2%)
Query: 177 IILNGWCNIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I N C+ + +++ + V M GI +D+ + + +I+CY + + L + +
Sbjct: 100 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 159
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++G E D ++ +++ V +A++L+ M E P++VT ++LI LC +
Sbjct: 160 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 219
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIM 350
+ EA D M++ G P TY L+ + ++G L M + + + Y +
Sbjct: 220 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + F + ++NE+ G D +Y++LI L +GK ++ + EM +
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 411 LLPEPKTDELLQD 423
++P+ T L D
Sbjct: 340 IIPDVVTFSALID 352
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T Y+T++ + K + A L EM PS+VT IL+ C ++
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG---ILLDGLCDNGEL 500
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A+ F ++ + +GI G+ +NII+
Sbjct: 501 NKALEIFEKMQKSRMTLGI----GI------------------------------YNIII 526
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G CN +A ++ +S +G+ DVV+++ +I K +L + LF +MK G
Sbjct: 527 HGMCNA-SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D YN +I A G + ++ L++ M+ G + + T +I L R+LD +
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLD---K 641
Query: 300 AFDEMLQ 306
+F +ML
Sbjct: 642 SFLDMLS 648
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 163/349 (46%), Gaps = 23/349 (6%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C A++ F + + + L+ LC D ++ +
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
++ P + +F+ +++ + G EA+ ++ EM RGI D ++++ +I + K LH
Sbjct: 310 NIIP-DVVTFSALIDVFVKE-GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ ++FD M G E D Y+ +I++ K + V D + L + + KG+ PN +TYN+L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
C++ KL+ A++ F EM+ RG+ P++ TY LD + GE + + E M+K
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
Y ++I + + + ++ +S+ G PD +Y +I L G L EA
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
+ +MKE P+ D++YN ++AH SG + V
Sbjct: 548 FRKMKEDGCTPD--------DFTYN--------ILIRAHLGGSGLISSV 580
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 22/376 (5%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAV 116
+G H MI + +K A++++ R + G P +T TL + +C
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLG--RAWKLGYEPDTITFSTL---VNGFCLE 153
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTK 173
V A+ K + L++ LC V +A L+ ++ V F +
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA--LVLIDRMVEYGFQPDEV 211
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +LN C G+S A ++ +M +R I VV +S +I K + L LF++
Sbjct: 212 TYGPVLNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ D Y+++I L D +++ M + + P+VVT+++LI K K
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
L EA++ ++EM+ RGI+P TY++ +D + ++F L+ S GC+P T
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS---KGCEPDIVT 387
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + ++ + +++ EIS G P+ +Y L+ +GKL A + + EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 408 EKQLLPEPKTDELLQD 423
+ + P T +L D
Sbjct: 448 SRGVPPSVVTYGILLD 463
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 15/348 (4%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRND--WE-AAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
N++E GIK S ++ + ND W+ A G+ + +I +
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN--IIPDVVTFSALIDVFV 326
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K K A L +EM P +T +L I +C + + A F
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSL---IDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
I + L+++ C+ K V D L +K + P NT ++N ++ G+C G A+
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNTLVLGFCQS-GKLNAAKE 441
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ EM RG+ VV++ ++ L+K L +F++M++ + +YN +IH +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V DA SL S+ +KGV P+VVTYN +I LCK L EA F +M + G +P
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 315 TYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
TY+ + G + L+E M+ G + T M+I S R
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 6/253 (2%)
Query: 177 IILNGWCNIIGSSREAERVW---MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I N C+ + +++ + V M GI +D+ + + +I+CY + + L + +
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++G E D ++ +++ V +A++L+ M E P++VT ++LI LC +
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIM 350
+ EA D M++ G P TY L+ + ++G L M + + + Y +
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + F + ++NE+ G D +Y++LI L +GK ++ + EM +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 411 LLPEPKTDELLQD 423
++P+ T L D
Sbjct: 311 IIPDVVTFSALID 323
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T Y+T++ + K + A L EM PS+VT IL+ C ++
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG---ILLDGLCDNGEL 471
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A+ F ++ + +GI G+ +NII+
Sbjct: 472 NKALEIFEKMQKSRMTLGI----GI------------------------------YNIII 497
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G CN +A ++ +S +G+ DVV+++ +I K +L + LF +MK G
Sbjct: 498 HGMCNA-SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D YN +I A G + ++ L++ M+ G + + T +I L R+LD +
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLD---K 612
Query: 300 AFDEMLQ 306
+F +ML
Sbjct: 613 SFLDMLS 619
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF FF ++ + S + S+ + + IL ++R FD AW L++E++ +T PSL+T +++
Sbjct: 95 AFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQ--QTHPSLLTLKSMS 152
Query: 108 ILIRRYCAVHDVGRAINAFYAYKR---FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
I++ R + AF ++ F G +F LL A C + +++A +
Sbjct: 153 IMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKM 212
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
F NTK+ NI+L G+ G E + EM +RG + V+++ I Y K
Sbjct: 213 HSRFSPNTKTMNILLLGFKES-GDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCF 271
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LRL ++M++ + +IH + + A L + + + P++ YN+
Sbjct: 272 GDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAF 331
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGC 341
+ L ++R++ A DEM + GI TYH F ++R+ E V L M +
Sbjct: 332 MSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNF 391
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P T +ML+K F + +Q +W + + G P + L+ L +GK++EA
Sbjct: 392 VPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEA 449
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKR---MGIECDRKVYNAVIHALAKGRLVKDAISLM 266
S S ++S +K ++ L F +M++ G E +N ++ A R +K+A S+
Sbjct: 150 SMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVF 209
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M + +PN T N L+ ++ + + EM++RG P TY+ +D
Sbjct: 210 HKMHSR-FSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAY-CK 267
Query: 327 EEVFG----LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ FG LLE M K C PT +T LI + +++NEIS PD
Sbjct: 268 KGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGV 327
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEK 409
Y A + +L + +++ A EM+E+
Sbjct: 328 YNAFMSSLIRSREVQSALMLMDEMEEE 354
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 192/414 (46%), Gaps = 21/414 (5%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ LV VL ++D A FF WA +Q Y H Y+TM+ IL K R A ++
Sbjct: 162 LNPRLVCAVLR-SQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRIL 220
Query: 89 DEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
M RG E P + ++ Y + A+ ++ + +
Sbjct: 221 RLMTRRGIERSP-----EAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIY 275
Query: 147 ALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L + ++ A L F + + P + S+N ++ G+C++ +A + EM +
Sbjct: 276 VLVKGNKLEKA--LRFLERMKVAGIEP-DIVSYNCLIKGYCDV-HRIDDALELIAEMPFK 331
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAKGRLVKD 261
G D VS+ +++ K R + +V RL + M + + D+ YN +I+AL+K D
Sbjct: 332 GCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADD 391
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ ++ EEKG + V Y++++ CK + +D+A+ +M +G +P + TY A +D
Sbjct: 392 ALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIID 451
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R G +E +L+ M K GC+P TY +L+ + ++ N E+ P
Sbjct: 452 GFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTP 511
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP-KTDELLQDWSYNKQFV 431
+ +Y+A++H L GKL EA EM EK LP P + L+Q N+ V
Sbjct: 512 NAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVV 565
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 158/373 (42%), Gaps = 12/373 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL ++ G+ Y ++ K + D A +L+ +M P +VT + I
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAI---ID 451
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-KNVQDAEHLMFCNKDVFPF 170
+C V + A + + LL+ LC K+++ E + + +
Sbjct: 452 GFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTP 511
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +++ +++G G EA + EM ++G + V + +I + +N+ +
Sbjct: 512 NAITYSAVMHGL-RREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ G + + +VI+ + + A+S+++ M P+ +TY +L L K
Sbjct: 571 LEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGK 630
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTND 346
+LDEA + +ML +GI PT TY H F R +++ LLE M + QP
Sbjct: 631 KSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRV-DDMMKLLEKM--IARQPFKT 687
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +I+K + K+ ++ + D + LI + ++G A++ +M
Sbjct: 688 VYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQM 747
Query: 407 KEKQLLPEPKTDE 419
+ L+P+ K E
Sbjct: 748 FRRNLIPDLKLCE 760
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 41/386 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ STR Y ++ RK A ++ EM P +VT + I YC
Sbjct: 139 KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV---INAYC-- 193
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR +A + K L C +V+ ++N
Sbjct: 194 -KEGRMSDALRVLELMK--------------------------LRGCKPNVW-----TYN 221
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G+CN G +A + +M G+ D V+++ +I ++ RL M+
Sbjct: 222 ALVQGFCNE-GKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 280
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D+ YNA+I+AL K A SL S+E +G+ PN VT+NSLI LCK+ K+D
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + ++M+ G +P TY +F++ + + +E + M + +P+ Y ++I
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 400
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
K + R +G V + W E+ +G PD +YT + A + G+L EA MEM + +
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460
Query: 414 EPKTDELLQDWSYNKQFVERQIASLK 439
+ L D + + ++ LK
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILK 486
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 167/427 (39%), Gaps = 32/427 (7%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVL--SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
HK + NK+ CG+ + + ++ + E+AF L + G Y+
Sbjct: 234 HKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL-LRLMEGDGLIADQYTYNA 292
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I L K + D A +L D + P+ VT +L I C V A
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL---INGLCKSGKVDIAWKFLEKMV 349
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGS 188
+ + LC+ K Q+ + KDV P +T ++ I+++
Sbjct: 350 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLKERNY 408
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
A R W EM G DVV+++ + Y L++ + +M + G+ D YN
Sbjct: 409 GLVA-RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR---------------- 292
++ A A+S++K M PN TY L++ L + R
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 527
Query: 293 -KLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDT 347
+L + FD M + P TY + L+ RT EE L+ M++ D
Sbjct: 528 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT-EEATSLVSLMKEDSISLNEDI 586
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ F + +++ + + + + ++G P SY L+ L G+ ++A + +M +
Sbjct: 587 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSR 646
Query: 408 EKQLLPE 414
K P+
Sbjct: 647 WKDYSPD 653
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+++ +I + +L LR M R G D +N++I + V A L M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTG 326
+G A +VV+Y +LI+ C+ ++DEA + F EM Q P + Y A + + G
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW-RQFGNVFKVWNEISENGNGPDRSSYTA 385
EE +L M+++G +P+ Y ++ F W R+ ++ E+ E G P + TA
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVV-DFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+I+A G++ +A + MK + P W+YN
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNV--------WTYN 221
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +F+ +I Y + + LFD+M G D Y A+I + + +A+ L
Sbjct: 45 DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELF 104
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII--- 323
M++ P++ Y +L+K LCKA + +E M + G P+ R Y A +D
Sbjct: 105 GEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWE 160
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
R +E +L+ M + G P T +I + + + + +V + G P+ +Y
Sbjct: 161 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 220
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
AL+ GK+ +A +M+ + P+ T LL
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLL 258
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 141/360 (39%), Gaps = 60/360 (16%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL +G T Y + I L K++ + I EM + PS V I+I
Sbjct: 344 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT---IVIH 400
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH-LMFCNKDVFPF 170
+ + G + + + + A C + +AE+ LM +K+
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII--------------- 215
+T ++N +++G +I G + A + +M+ + ++ ++
Sbjct: 461 DTMAYNTLMDGHASI-GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 519
Query: 216 --SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+ KA L V LFD MK+ + Y++++ ++ ++A SL+ M+E
Sbjct: 520 TPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS 579
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-HAFLDIIRTGE----- 327
++ N Y +L+ CK+++ +A M+Q G P + +Y H +I G+
Sbjct: 580 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAK 639
Query: 328 EVF--------------------GLLES------------MRKMGCQPTNDTYIMLIKKF 355
E+F GL++ + +M C+P++ TY ML ++
Sbjct: 640 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699
>gi|224144668|ref|XP_002325369.1| predicted protein [Populus trichocarpa]
gi|222862244|gb|EEE99750.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 185/407 (45%), Gaps = 45/407 (11%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
+ ++SELV VL N + FF WA +S Y+ +T EY +I L + +K+ + W
Sbjct: 36 LPITSELVFRVLRACSNSPSESLRFFNWA--RSYYSPTTIEYEELIITLVRNKKYASMWK 93
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FKFAVGIEDFQGLL 145
LI +++ V+ T+ +I Y + +A+ F R + + LL
Sbjct: 94 LIAQVKDNLGDKFSVSSDTVCSIIEEYGKHGLIDQAVEVFNKCSRSLNCQHNVCVYNSLL 153
Query: 146 SALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
ALC K A L+ K + P + +++ +++NGWC+ G REA+ EMS++G
Sbjct: 154 FALCEVKMFHGAYALVRRMIRKGIVP-DKRTYGVLVNGWCSS-GKLREAKGFLEEMSKKG 211
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V + R+L +I L ++ A
Sbjct: 212 FNPPV-----------RGRDL------------------------LIEGLLNAGYLESAK 236
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+++ M ++G+ P+V T+NS+++ +C A ++D + + + G P I +Y + +
Sbjct: 237 DMVRRMMKEGLVPDVNTFNSMVEAICNAGEVDFCVDMYHSVCKLGFCPDINSYKILIPAV 296
Query: 324 -RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G +E F LL ++ + G +P Y +IK R QF + F ++E+ G+ P+R
Sbjct: 297 SKVGRIDEAFRLLHNLIEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKVKGHPPNR 356
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I GK EA Y +EM E L+P + +++ D N
Sbjct: 357 PVYTMMITMCGRGGKHVEAANYLVEMTEIGLVPISRCFDMVTDGLKN 403
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+I EVF + R + CQ Y L+ + F + + + G PD+
Sbjct: 125 LIDQAVEVFN--KCSRSLNCQHNVCVYNSLLFALCEVKMFHGAYALVRRMIRKGIVPDKR 182
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+Y L++ +GKL EA + EM +K P + +LL + N ++E
Sbjct: 183 TYGVLVNGWCSSGKLREAKGFLEEMSKKGFNPPVRGRDLLIEGLLNAGYLE 233
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 174/374 (46%), Gaps = 22/374 (5%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ +V+ +LS + + ++A +S A + + Y+ M+ + + F+ +
Sbjct: 228 TNARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMF 287
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
+ MR P +V+ TL+ + CA G AI +F I + L+SA
Sbjct: 288 NLMRERGCEPDIVSFNTLINAKVKSCATVS-GLAIELLDEVGKFGLRPDIITYNTLISAC 346
Query: 149 CRYKNVQDA----EHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
R N+++A H+ C D++ +N I + G C G + +AE ++ ++
Sbjct: 347 SRESNLKEAIGVFSHMESNRCQPDLWTYNAM---ISVYGRC---GFALKAEHLFEKLKSN 400
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G D V+++ ++ +SK N KV + ++M +MG D YN +IH K +A
Sbjct: 401 GFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEA 460
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-D 321
+ L + M+ G P+ VTY LI L KA K++EA + EML G+ PT+ TY A +
Sbjct: 461 LRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICA 520
Query: 322 IIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ G EE F MR+ G + + Y +++ F R+ + ++ E+ E G
Sbjct: 521 YAKVGRRVEAEETFN---RMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGF 577
Query: 377 GPDRSSYTALIHAL 390
PD Y ++ AL
Sbjct: 578 TPDTGLYEVMLPAL 591
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 199 MSQRGICYDVVSFSCIISCYSK--ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M +RG D+VSF+ +I+ K A + L D++ + G+ D YN +I A ++
Sbjct: 290 MRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRE 349
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+K+AI + ME P++ TYN++I + +A F+++ G SP TY
Sbjct: 350 SNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTY 409
Query: 317 HAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
++ L E+V + E M KMG TY +I + + + +++ ++
Sbjct: 410 NSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKS 469
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+G PD +YT LI L K+EEA + EM + + P T
Sbjct: 470 SGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHT 513
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 5/225 (2%)
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK--GRLVKD 261
I V ++ ++ Y++ N KV +F+ M+ G E D +N +I+A K +
Sbjct: 260 IADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGL 319
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
AI L+ + + G+ P+++TYN+LI + L EA F M P + TY+A +
Sbjct: 320 AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMIS 379
Query: 322 II-RTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G + L E ++ G P TY L+ FS+ V + E+ + G G
Sbjct: 380 VYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGK 439
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +Y +IH +G+ +EA + Y +MK P+ T +L D
Sbjct: 440 DEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLID 484
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
R+ + EM + G D+ F+ ++ YS + ++ ++ G+ D + YN +
Sbjct: 946 RDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTL 1005
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I + ++ +SLM M+ G+ P TY S+I K + D+A + F+E+ G
Sbjct: 1006 ITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGY 1065
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
YH + + RT ++ LLE M++ G +P T +L+ + + Q +
Sbjct: 1066 KLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADR 1125
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + G D Y+++I A G + + EMKE + P+
Sbjct: 1126 ILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPD 1173
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
S ++ +++A NL +V ++++ MK G +Y +I L + + V+D ++ M
Sbjct: 896 SILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM 955
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTG 326
E G P++ +NS++K + + + G++P TY+ + +
Sbjct: 956 GEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRP 1015
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EE L+ M+ +G +P DTY +I FS+ + + +++ E+ NG DRS Y +
Sbjct: 1016 EEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLM 1075
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+ +G ++A MKE + P T LL SY K
Sbjct: 1076 MKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLM-VSYGK 1116
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 43/284 (15%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI--ISCYSKARNLHKVLRLFD 232
+ +++ +C I G A+ + + I D V+ I I Y K + + +
Sbjct: 755 YQSMVSVYCRI-GFPETAQHLLYHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAESIVE 813
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL---- 288
+++ + DRKV+NA+IHA A + A ++ +M +G +P V + N L++ L
Sbjct: 814 NLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDG 873
Query: 289 -------------------------------CKARKLDEARQAFDEMLQRGISPTIRTYH 317
+A L E ++ ++ M G PT+ Y
Sbjct: 874 RLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYR 933
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ ++ + +V +L M + G +P + ++K +S +F N+ ++ I +
Sbjct: 934 LMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDA 993
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
G PD +Y LI + + EE +MK L EPK D
Sbjct: 994 GLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGL--EPKRD 1035
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 117/295 (39%), Gaps = 22/295 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYC 114
K +GY + Y MI +L + ++ ++ EM GE G P L Q +++ Y
Sbjct: 921 KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEM--GEAGFKPDL---QIFNSVLKLYS 975
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
++ + + + A E + L++ CR ++ LM K +
Sbjct: 976 SIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSL------G 1029
Query: 175 FNIILNGWCNIIGS------SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ + ++I + +AE ++ E+ G D + ++ Y + + K
Sbjct: 1030 LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAE 1089
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L + MK GIE + + ++ + K ++A ++K++ G + + Y+S+I
Sbjct: 1090 NLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAY 1149
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMG 340
K + EM + I P R + F+ EV LL +++ +G
Sbjct: 1150 LKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVG 1204
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA +V EM G+ + ++S +I Y+K + F++M+ GI+ D Y+ ++
Sbjct: 494 EASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ +K A +L + M E G P+ Y ++ L +
Sbjct: 554 DFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVR 593
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 9/204 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
II C KA L L + +G +Y ++IH K A L M G
Sbjct: 690 IILC--KAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNG 747
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG------E 327
V P+ Y S++ C+ + A+ + I T H +DII T +
Sbjct: 748 VEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVH-IIDIIETYGKLKMWQ 806
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
++E++R+ + + LI ++ + ++N + G P S L+
Sbjct: 807 SAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLL 866
Query: 388 HALFLNGKLEEAHQYYMEMKEKQL 411
AL ++G+L E + E+++ L
Sbjct: 867 QALIVDGRLSELYVVIQELQDMDL 890
>gi|449449535|ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 187/428 (43%), Gaps = 51/428 (11%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA-GKQSGYAHST 65
+ R+F +R+ + +I ++SELV VL N +F FF WA Y +T
Sbjct: 52 VRRDFYMERTLNKLRISN----LNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTT 107
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
E+ ++ L + RK+ T W ++ +M+ T ++ +T+ +I+ Y V A+
Sbjct: 108 LEFEELVKTLARTRKYTTMWKVLLQMK---TQNLKISPETISFIIQEYGKQGLVDNAVTI 164
Query: 126 F-YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
F K +E + LL ALC K A L+ K V P + K++ ++ GW
Sbjct: 165 FNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTP-DKKTYGTLVTGW 223
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +EA+ EMSQ+G + + R+L
Sbjct: 224 CS-AGKMKEAQEFLEEMSQKGFNPPL-----------RGRDL------------------ 253
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
++ L ++ A +++ M ++G P++ T+NSLI +C + ++D F
Sbjct: 254 ------LVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFH 307
Query: 303 EMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
E+ + G+ P I TY + + G +E F LL + G P Y ++K +
Sbjct: 308 EVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRG 367
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
QF + F + ++ G+ P+R YT LI G+ +A Y MEM E L P + +
Sbjct: 368 QFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFD 427
Query: 420 LLQDWSYN 427
++ D N
Sbjct: 428 MVTDGLKN 435
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 8/163 (4%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTY----HAFLDIIRTGEEV 329
P + + L+K L + RK + +M + ISP ++ + ++ +
Sbjct: 105 PTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTI 164
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F + + + C T + Y L+ + F + + + G PD+ +Y L+
Sbjct: 165 FN--QCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTG 222
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
GK++EA ++ EM +K P + +LL + N ++E
Sbjct: 223 WCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLE 265
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 13/374 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ T L DE+ S+ + +L+R C + A FY K IE
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWCNIIGSSREAERV 195
+LS + ++ A L ++F S FNI++N C G ++A
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLY---AEMFRLRISSTVYTFNIMVNVLCKE-GKLKKAREF 249
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
M G +VVS++ II YS N+ R+ D M+ GIE D Y ++I + K
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A L M E G+ PN VTYN+LI C L+ A DEM+++GI P++ T
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369
Query: 316 Y----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y HA R G E +++ MRK G P TY +LI +SR F + NE+
Sbjct: 370 YNLLVHALFMEGRMG-EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
G P +YT+LI+ L +++EA + ++ ++ + P+ + D V
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488
Query: 432 ERQIASLKAHQPQS 445
ER LK +S
Sbjct: 489 ERAFMLLKEMDRKS 502
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 10/344 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L A + G + Y ++I+ + K + + A L D+M P+ VT TL I
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL---ID 340
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
YC D+ RA + + + + L+ AL + +A+ ++ K + P
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 400
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++NI++NG+ G++++A + EM +GI V+++ +I S+ + +
Sbjct: 401 -DAITYNILINGYSRC-GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 458
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF+++ G+ D ++NA++ V+ A L+K M+ K V P+ VT+N+L++ C
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 518
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTND 346
+ K++EAR DEM +RGI P +Y+ + R G+ + F + + M +G PT
Sbjct: 519 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 578
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY LIK + ++ ++ E+ G PD S+Y +LI +
Sbjct: 579 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 177/393 (45%), Gaps = 51/393 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ M+ +L K K A I M G P++V+ T++ + R ++A
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM- 288
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
R K GIE + L+S +C+ +++A L + P N ++N +++G
Sbjct: 289 ---RVK---GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDG 341
Query: 182 WCN----------------------------------IIGSSREAERVWMEMSQRGICYD 207
+CN + G EA+ + EM ++GI D
Sbjct: 342 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ +I+ YS+ N K L ++M GIE Y ++I+ L++ +K+A L +
Sbjct: 402 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 461
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG 326
+ ++GV+P+V+ +N+++ C ++ A EM ++ + P T++ + R G
Sbjct: 462 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE LL+ M++ G +P + +Y LI + R + F+V +E+ G P +Y
Sbjct: 522 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 581
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
ALI L N + + A + EM K + P+ T
Sbjct: 582 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 22/289 (7%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D E AF++ K+ G S Y+ ++ L + A +I EMR P +
Sbjct: 345 KGDLERAFSYRDEMVKK-GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA 157
T ILI Y G A AF + + GIE + L+ L R +++A
Sbjct: 404 TYN---ILINGYSRC---GNAKKAFDLHNEM-LSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFS 212
+ L ++ V P + FN +++G C ++ ER +M EM ++ + D V+F+
Sbjct: 457 DDLFEKILDQGVSP-DVIMFNAMVDGHC----ANGNVERAFMLLKEMDRKSVPPDEVTFN 511
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ + + + L D+MKR GI+ D YN +I + +KDA + M
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
G P ++TYN+LIK LCK ++ D A + EM+ +GISP TY + ++
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 160/353 (45%), Gaps = 17/353 (4%)
Query: 65 TREYHTMIAI---LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
T + HT AI L K +K A AL++++ P++ T LL C + +
Sbjct: 162 TIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALL---NGLCKMGRLEE 218
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNI 177
AI+ + + L+ L + K +A L K++ +T +
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF---KEMALRGLVLDTVCYTA 275
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G G +A V+ M+ +G DVV+ S +I KA + +R+F M+
Sbjct: 276 LIRGLLQA-GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + VY+A+IH L K R + A+ ++ M++ P+ +TYN LI LCK+ ++ A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R FDEML+ G P + TY+ + + G + G+ + M C P TY LI
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ RQ + + E G PD Y++L+ L +GKLE + EM+
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME 507
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN-KDVFPFNTKSFNIILNGWCNIIGSS 189
RF F + LL R K ++A +L+ F + +++N+++ G+C +
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYC-LAREP 110
Query: 190 REAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EA V EM + G+ + + + ++ K+ + + F+ G D Y A
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++ LAK + ++DA++LM+ + G P + TYN+L+ LCK +L+EA +++ G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230
Query: 309 ISPTIRTYHAFLDIIRTGEEVF--------------------------GLLE-------- 334
+P + TY + +D + + F GLL+
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290
Query: 335 ----SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+M GC P T +I + + G +++ + G P+ Y+ALIH L
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K++ A + +MK+ P+ T +L D
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILID 383
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 17/289 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G T Y +I L + K A ++ M P +VT T+ I C +
Sbjct: 265 GLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM---IDGLCKAGRI 321
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
G A+ F + + A + L+ LC+ + + A ++ FC D T
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD-----TI 376
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI+++G C G A + EM + G DV +++ ++S + KA N +FD
Sbjct: 377 TYNILIDGLCKS-GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + Y +I L K R + A + M+E+G P+ Y+SL+ LCK+ K
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMG 340
L+ FDEM + G++ + + + +E L ++RK G
Sbjct: 496 LEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 544
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y +I L K RK D A ++ +M+ P +T ILI C DV
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN---ILIDGLCKSGDV 391
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A AF F +L A C+ DV+ ++NI++
Sbjct: 392 -EAARAF--------------FDEMLEAGCK--------------PDVY-----TYNILV 417
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C G++ A V+ +MS +VV++ +IS K R L K F MK G
Sbjct: 418 SGFCKA-GNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D VY++++ L K ++ L ME GVA N T LI LCKA ++DEA
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVS 535
Query: 300 AFDEMLQRGISPTIRTYHAFLDII 323
F+ + + G+ P Y++ + +
Sbjct: 536 LFNAIRKEGM-PHPYAYNSIISTL 558
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 13/368 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ T L DE+ S+ + +L+R C + A FY K IE
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWCNIIGSSREAERV 195
+LS + ++ A L ++F S FNI++N C G ++A
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLY---AEMFRLRISSTVYTFNIMVNVLCKE-GKLKKAREF 271
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
M G +VVS++ II YS N+ R+ D M+ GIE D Y ++I + K
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A L M E G+ PN VTYN+LI C L+ A DEM+++GI P++ T
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391
Query: 316 Y----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y HA R G E +++ MRK G P TY +LI +SR F + NE+
Sbjct: 392 YNLLVHALFMEGRMG-EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
G P +YT+LI+ L +++EA + ++ ++ + P+ + D V
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510
Query: 432 ERQIASLK 439
ER LK
Sbjct: 511 ERAFMLLK 518
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 10/344 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L A + G + Y ++I+ + K + + A L D+M P+ VT TL I
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL---ID 362
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
YC D+ RA + + + + L+ AL + +A+ ++ K + P
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 422
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++NI++NG+ G++++A + EM +GI V+++ +I S+ + +
Sbjct: 423 -DAITYNILINGYSRC-GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 480
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF+++ G+ D ++NA++ V+ A L+K M+ K V P+ VT+N+L++ C
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 540
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTND 346
+ K++EAR DEM +RGI P +Y+ + R G+ + F + + M +G PT
Sbjct: 541 REGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLL 600
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY LIK + ++ ++ E+ G PD S+Y +LI +
Sbjct: 601 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 177/393 (45%), Gaps = 51/393 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ M+ +L K K A I M G P++V+ T++ + R ++A
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM- 310
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
R K GIE + L+S +C+ +++A L + P N ++N +++G
Sbjct: 311 ---RVK---GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDG 363
Query: 182 WCN----------------------------------IIGSSREAERVWMEMSQRGICYD 207
+CN + G EA+ + EM ++GI D
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 423
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ +I+ YS+ N K L ++M GIE Y ++I+ L++ +K+A L +
Sbjct: 424 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 483
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG 326
+ ++GV+P+V+ +N+++ C ++ A EM ++ + P T++ + R G
Sbjct: 484 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 543
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE LL+ M++ G +P + +Y LI + R + F+V +E+ G P +Y
Sbjct: 544 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 603
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
ALI L N + + A + EM K + P+ T
Sbjct: 604 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 22/289 (7%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D E AF++ K+ G S Y+ ++ L + A +I EMR P +
Sbjct: 367 KGDLERAFSYRDEMVKK-GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA 157
T ILI Y G A AF + + GIE + L+ L R +++A
Sbjct: 426 TYN---ILINGY---SRCGNAKKAFDLHNEM-LSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFS 212
+ L ++ V P + FN +++G C ++ ER +M EM ++ + D V+F+
Sbjct: 479 DDLFEKILDQGVSP-DVIMFNAMVDGHC----ANGNVERAFMLLKEMDRKSVPPDEVTFN 533
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ + + + L D+MKR GI+ D YN +I + +KDA + M
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
G P ++TYN+LIK LCK ++ D A + EM+ +GISP TY + ++
Sbjct: 594 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 16/358 (4%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
+R + ++I LG+ + D A++L ++M + P++V +L I+ + GR +
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL---IQNF---FKCGRKED 535
Query: 125 AFYAYKRFKFAVGIEDFQGLLSAL-CRYK--NVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
YK D L S + C +K V+ L + + P + +S++I++
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP-DVRSYSILI 594
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G G SRE +++ EM ++G+ DV++++ +I + K+ + K +L ++MK G+
Sbjct: 595 HGLVKA-GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y +V+ LAK + +A L + + GV NVV Y+SLI K ++DEA
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFS 356
+E++Q+G++P T++ LD + EE+ ++M+ + C P TY ++I
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R+F F W E+ + G P+ +YT +I L G + EA + K +P+
Sbjct: 774 MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 17/403 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A + Y+ +I +L K + + A + D M+ P+++T I+I R C +
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVN---IMIDRLCKAQKLDE 465
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
A + F + F L+ L R V DA L + D P ++I
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 180 NGW-CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
N + C G + +++ EM RG D++ + + C KA + K LF+++K G
Sbjct: 526 NFFKC---GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG 582
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ D + Y+ +IH L K ++ L M+E+G+ +V+ YN++I CK+ K+D+A
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
Q +EM +G+ PT+ TY + +D I +E + L E + +G Y LI F
Sbjct: 643 QLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGF 702
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + + + E+ + G P+ ++ L+ AL +++EA + MK + P
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762
Query: 416 KTDELLQDW-----SYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T ++ + +NK FV Q + +P + T +I+
Sbjct: 763 MTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 163/386 (42%), Gaps = 48/386 (12%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D AF +F W +++ AH Y+ + ++ + R D +++EM G ++
Sbjct: 112 DVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFG---LSN 168
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
+ L+ + H + A ++FKF + L+ AL N D
Sbjct: 169 HVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGAL-SAANRPD------- 220
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
P T ++ +M + G +V F+ ++ +++
Sbjct: 221 -----PMLT----------------------LFHQMQEIGYEANVHLFTTLVRVFAREGR 253
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ L L D+MK D +YN I K V A M+ +G+ P+ VTY +
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 284 LIKPLCKARKLDEARQAFDEM-LQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMR 337
LI LCKAR+LDEA + F+E+ L R + P + Y+ I+ G +E + LLE +
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSV-PCVYAYNTM--IMGYGSAGKFDEAYSLLERQK 370
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ GC P+ Y ++ R + ++ +E+ ++ P+ ++Y LI L G+LE
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELE 429
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
A + MKE L P T ++ D
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMID 455
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 165/405 (40%), Gaps = 62/405 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI----RR 112
K + + Y+ I GKV K D AW EM+ P VT TL+ ++ R
Sbjct: 265 KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRL 324
Query: 113 YCAVH-----DVGRAINAFYAYKRFKFAVG-IEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
AV D+ R++ YAY G F S L R K K
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR-----------KG 373
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
P + ++N IL G EA R+ EM Q ++ +++ +I KA L
Sbjct: 374 CIP-SVIAYNCILT-CLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEA 430
Query: 227 VLRLFDQMKRMGI----------------------EC-------------DRKVYNAVIH 251
L++ D MK G+ C D + + ++I
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L + V DA SL + M + PNVV Y SLI+ K + ++ + + EM+ RG SP
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Query: 312 TIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ ++++D + + GE G L E ++ G P +Y +LI + +K++
Sbjct: 551 DLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLF 610
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E+ E G D +Y +I +GK+++A+Q EMK K L P
Sbjct: 611 YEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQP 655
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 133/309 (43%), Gaps = 41/309 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+ K+ G Y+T+I K K D A+ L++EM+ P++VT +++ +
Sbjct: 609 LFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLA 668
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
+ + R A+ ++ K ++G++ N
Sbjct: 669 K------IDRLDEAYMLFEEAK-SIGVD------------------------------LN 691
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++ +++G+ + G EA + E+ Q+G+ + +++C++ KA + + F
Sbjct: 692 VVIYSSLIDGFGKV-GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
MK + + Y+ +I+ L R A + M+++G+ PN +TY ++I L KA
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+ EAR FD G P Y+A ++ + + + + + E R GC+ + T
Sbjct: 811 GNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTC 870
Query: 349 IMLIKKFSR 357
++L+ +
Sbjct: 871 VVLLDALHK 879
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y +++ L K+ + D A+ L +E + ++V +L+
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID------GF 702
Query: 117 HDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNT 172
VGR A+ + + LL AL + + + +A+ K++ N
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+++I++NG C +I +A W EM ++G+ + ++++ +I+ +KA N+ + LFD
Sbjct: 763 MTYSIMINGLC-MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD 821
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ K G D YNA+I L+ DA + + KG N T L+ L KA
Sbjct: 822 RFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKAD 881
Query: 293 KLDEA 297
L++A
Sbjct: 882 CLEQA 886
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 192/420 (45%), Gaps = 26/420 (6%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+ M + +E+ +SSE+V++V+ R E F FF+W ++ + S ++ +I +L
Sbjct: 49 NPMEDALEKLAPFLSSEIVNDVMREQRRP-ELGFRFFIWTTRRRSF-RSWVTHNLVIDML 106
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K FDT W +++E++ + T +LI Y +A+ +F K F
Sbjct: 107 AKDDGFDTYWKILEELKNSNIQ---IPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCK 163
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCN------KDVFPFNTKSFNIILNGWCNIIGSS 189
+ + +L + VQ L+ K + N +F I+LNG C G +
Sbjct: 164 PDVFTYNSILHVM-----VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCK-NGKT 217
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+A +++ EM+Q+GI + + ++ I+S +A+ V RL + MK G D NA+
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ K + +A +L++ E++G + Y+SLI L +A++ DE ++ +M + GI
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337
Query: 310 SPTIRTYHAFLDIIRTGEEV------FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P + Y +IR EV +L M + G P Y LIK F
Sbjct: 338 EPDVVLYTI---LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ EIS+N P +YT LI + NG L+EA Q + +M+ P T L D
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 25/390 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y +++ L + ++ D L++ M+ P +T LL +C +
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL---DGFCKLG 285
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKS 174
+ A +++ + +GI+ + L+ L R Y VQ+ MF K +
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF--KAGIEPDVVL 343
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I++ G+C + G A + +M+QRG+ D ++ +I + L K L ++
Sbjct: 344 YTILIRGFCEV-GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ Y +I + + L+ +A + ME G +P+++T+N+LI LCKA +L
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 295 DEARQAFDEM-----------LQRGISPTIRTYHAFLDIIRTGE-----EVFGLLESMRK 338
+EAR F +M L +G + T + R E + + LL +
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLAD 522
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P TY +LI F + + FK++ E+ G+ PD +Y LI + E+
Sbjct: 523 SGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREED 582
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
A + +M + P + L WS K
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 612
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 163/419 (38%), Gaps = 61/419 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + Y ++I L + +++D +M P +V ILIR +C V
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYT---ILIRGFCEV 354
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKS 174
V A+N + + + L+ C + A L D FP + +
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP-TSCT 413
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH--------- 225
+ I++ G C G EA +++ +M G +++F+ +I KA L
Sbjct: 414 YTILICGMCRN-GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
Query: 226 ---------------------------------------KVLRLFDQMKRMGIECDRKVY 246
K +L Q+ G+ D Y
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K + + A L + ++ KG +P+ VTY +LI + + ++A + D+M++
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK 592
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGL-LESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G +P+ Y + R G+ F L L+ +R + Q D + L ++ +
Sbjct: 593 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQ--EDETLKLAEEHFEKGELE 650
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ E++ N + + YT + L + EEA + ++ +KE Q+ P + +L
Sbjct: 651 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVML 709
>gi|449485620|ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 167/402 (41%), Gaps = 56/402 (13%)
Query: 22 IEECGIKVSSELVSEVLSW------VRNDWEAA---FTFFLWAGKQSGYAHSTREYHTMI 72
++E +KVS LV EVL V N + A + FF+W+G+ Y H+ YH ++
Sbjct: 99 LDELQLKVSGVLVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIM 158
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAFYAY 129
I + +F W ++DEM E G VT +T +ILI C + G R + F
Sbjct: 159 KIFAECEEFKAMWRVLDEMT--EKGYP-VTARTFMILI---CTCGEAGLAKRVVERFIKS 212
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F F + +L L K + L GW
Sbjct: 213 KTFNFRPYKHSYNAILHGLVIVKQYK-----------------------LIGW------- 242
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
V+ +M D+++++ ++ K L + RL D+M R G D YN +
Sbjct: 243 -----VYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNIL 297
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
++ L KG A++L+ M E G PNV+ + +LI L +A LD + FDE+ G
Sbjct: 298 LYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGC 357
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + Y + E+ + M G P TY +I+ F +F +
Sbjct: 358 IPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYS 417
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ +E+ G P+ Y+ L+ L GKL EAH+ M E
Sbjct: 418 MLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKRMVE 459
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
RV EM+++G +F +I +A +V+ F + K + YNA++H L
Sbjct: 172 RVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGL 231
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ K + M +P+++TYN L+ CK KLD+ + DEM ++G SP
Sbjct: 232 VIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDF 291
Query: 314 RTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY+ L ++ G++ LL MR++G P + LI SR ++E
Sbjct: 292 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDE 351
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ NG PD YT +I + G+ E+A ++ EM K LP T
Sbjct: 352 LGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFT 398
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
Y HS Y+ ++ L V+++ + D+M + P ++T LL + +
Sbjct: 220 YKHS---YNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFH 276
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIIL 179
R ++ R F+ + LL L + A +L+ ++V F N F ++
Sbjct: 277 RLLDEM---ARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLI 333
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG G+ + + E+ G DVV ++ +I+ +++A K FD+M G
Sbjct: 334 NGLSRA-GNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQ 392
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ YN++I K+A S++ ME +G PN + Y++L+ L A KL EA +
Sbjct: 393 LPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHK 452
Query: 300 AFDEMLQRG 308
M++ G
Sbjct: 453 VIKRMVENG 461
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESM- 336
V +Y+ ++K + + + DEM ++G T RT F+ +I T E GL + +
Sbjct: 151 VNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTART---FMILICTCGEA-GLAKRVV 206
Query: 337 ------RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ +P +Y ++ +Q+ + V++++ + + PD +Y L+ +
Sbjct: 207 ERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSS 266
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
GKL++ H+ EM K P+ T +L
Sbjct: 267 CKLGKLDQFHRLLDEMARKGFSPDFHTYNIL 297
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 167/365 (45%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM +VT L ++
Sbjct: 109 FFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSEVV 166
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R V +AI FY K K + + ++ L +Y+ V + + M
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHC 226
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP +T +++ +++ +C + G A ++ EM G+ ++ +++ + K ++H
Sbjct: 227 FP-DTMTYSALISAFCKL-GRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGA 284
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ D Y +I L K + +A M+ +G P+ + N++I
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
L KA +LD+A + F EM P++ TY+ + + EV E M++ G P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
++ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 404 MEMKE 408
E+KE
Sbjct: 465 QELKE 469
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 27/340 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ P T + +L+ + ++DV A++
Sbjct: 230 TMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQP---TTKIYTMLVALFFKLNDVHGALS 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
F + + + L+ L + + +A H + C D I+
Sbjct: 287 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD---------TIV 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N N +G + +A +++ EM VV+++ II SK+R +V F++
Sbjct: 338 MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRA-SEVPSWFER 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK GI Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++
Sbjct: 397 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
D A + F E+ + S + R Y + + + G ++ + + M K+GC P Y
Sbjct: 457 YDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 516
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L+ +R + E+G PD +SY +++ L
Sbjct: 517 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 556
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 24/321 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G +T+ Y ++A+ K+ A +L +EMR P + T L IR
Sbjct: 257 KDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTEL---IRGLGKA 313
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
+ A + FY +R +++ L + + DA L + C V +
Sbjct: 314 GRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTY 373
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT I+ + E + M + GI ++S +I + K + K + L
Sbjct: 374 NT-----IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 428
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G Y ++I AL K + A L + ++E + + Y +IK L K
Sbjct: 429 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGK 488
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A +LD+A FDEM + G +P + Y+A + + RTG +E + M++ GC P ++
Sbjct: 489 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 548
Query: 348 YIMLIKKFSR-------WRQF 361
Y +++ + WR F
Sbjct: 549 YNIILNGLQKQEDLIVQWRCF 569
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 5/225 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC S ++ A+ + K + +F Q+K + + YN++I L
Sbjct: 148 EMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHE 207
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ +TY++LI CK + D A Q +EM G+ PT +
Sbjct: 208 GQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKI 267
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + +V G L E MR C+P TY LI+ + + + + E+
Sbjct: 268 YTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD +I+ L G+L++A + + EM + +P T
Sbjct: 328 REGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGI---SPT-IRTYHAFLDIIRTGEEVFGLLES 335
TY +LI L + E + EM++ I +PT + L + + +
Sbjct: 125 TYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFLNG 394
++ CQPT Y +I Q+ V +++NE+S G+ PD +Y+ALI A G
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ + A Q EMK+ + P K +L
Sbjct: 245 RRDSAIQLLNEMKDNGMQPTTKIYTML 271
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 175/402 (43%), Gaps = 76/402 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I+ L + +F A A+ M P+LVT +L +
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVL-------------------H 219
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
Y K AV ++ L+ ++ KD P + ++N +++ C
Sbjct: 220 VYS--KIAVPWKEVLALVDSM---------------RKDGIPLDRYTYNTLIS-CCRRRA 261
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+EA +V+ EM G D V+ + ++ Y KAR + + + +M++ G YN
Sbjct: 262 LYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYN 321
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I + K L+++A L + ME KG+ P+V+TY +L+ L +A K+D A ++EML+
Sbjct: 322 SLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRN 381
Query: 308 GISPTIRTYHAFL----------------DIIRTG----------------------EEV 329
G P + TY+A + D IR+ EV
Sbjct: 382 GCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEV 441
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
G+ + M+K G P DTY+ LI +SR F +++ + E G PD S+Y A++ A
Sbjct: 442 SGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSA 501
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLP-EPKTDELLQDWSYNKQF 430
L G+ E+A + + EM+ P E LL ++ K+
Sbjct: 502 LARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKL 543
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV-KDAISL 265
D +++ +IS S+A + +F +M G+ YN V+H +K + K+ ++L
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLAL 234
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKL-DEARQAFDEMLQRGISPTIRTYHAFLDI-- 322
+ SM + G+ + TYN+LI C+ R L EA + FDEM G P T ++ LD+
Sbjct: 235 VDSMRKDGIPLDRYTYNTLIS-CCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 323 -IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R +E G+L+ M + GC P+ TY LI + + ++ E+ G PD
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 382 SYTALIHALFLNGKLEEAHQYYMEM 406
+YT L+ L GK++ A Y EM
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEM 378
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 177/453 (39%), Gaps = 83/453 (18%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G+ ++++ + GK R++D A ++ EM G PS+VT + LI Y
Sbjct: 274 RAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNS---LISSYVKD 330
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-----EHLM-FCNKDVFPF 170
+ A + + + L+S L R + A E L C ++ +
Sbjct: 331 GLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTY 390
Query: 171 N-----------------------TKSFNIILNGWCNII------GSSREAERVWMEMSQ 201
N + F + W ++ G E V+ EM +
Sbjct: 391 NALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKK 450
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G + ++ +IS YS+ + + ++ +M GI D YNAV+ ALA+G +
Sbjct: 451 SGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQ 510
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD-------------------------- 295
A L ME P+ ++Y+SL+ A+KLD
Sbjct: 511 AEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVL 570
Query: 296 ---------EARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMG 340
+ +AF E+ +R S I +A + I ++ EE+ L M++
Sbjct: 571 VNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSL---MKESS 627
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ TY L+ +SR + EI + PDR SY +I+A G+++EA
Sbjct: 628 INLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEAS 687
Query: 401 QYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ + EMK L+P+ T + ++ + N F E
Sbjct: 688 RLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEE 720
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 142/342 (41%), Gaps = 25/342 (7%)
Query: 30 SSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
S+ V +V++W +N + + K+SGY Y ++I+ + FD
Sbjct: 415 SAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 474
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + M P + T +L + R GR A + + D
Sbjct: 475 QAMEIYKRMIEAGIHPDISTYNAVLSALARG------GRWEQAEKLFAEMENLDSRPDEL 528
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN------IILNGWCNIIGSSREAERVW 196
S L Y N + + + ++D++ +S N +++N N + + E+ +
Sbjct: 529 SYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLS---DTEKAF 585
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+E+ +R D+ + +IS Y K + KV + MK I YN+++H ++
Sbjct: 586 LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL 645
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +++ ++ P+ +YN++I + ++ EA + F EM G+ P I TY
Sbjct: 646 GDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTY 705
Query: 317 HAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ F+ EE L+ M GC+P TY +++++
Sbjct: 706 NIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEY 747
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 130/301 (43%), Gaps = 14/301 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
E+ ++ E GI + VLS + WE A F Y +++
Sbjct: 478 EIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDEL-SYSSLLHA 536
Query: 75 LGKVRKFDTAWALIDEMRGG--ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
+K D +L +++ E+ LV +TL+++ + V+++ AF +R
Sbjct: 537 YANAKKLDKMKSLSEDIYAERIESHNGLV--KTLVLVNSK---VNNLSDTEKAFLELRRR 591
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSRE 191
+ ++ I ++S + V+ E ++ K+ +T ++N +++ + + G +
Sbjct: 592 RCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL-GDCEK 650
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
E + E+ D S++ +I Y + + + RLF +MK G+ D YN +
Sbjct: 651 CENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVK 710
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM--LQRGI 309
+ + ++AI L++ M G PN TYN++++ C ++ + + + L GI
Sbjct: 711 SYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPELHPGI 770
Query: 310 S 310
S
Sbjct: 771 S 771
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 184/422 (43%), Gaps = 25/422 (5%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND A F + G+ Y+T+I L K + A L +M P++VT
Sbjct: 51 NDLGAGMELFEEL-VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVT 109
Query: 103 KQTLLILIRRYCAVH--DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+LI C V D R + K I + L LC+ +A L
Sbjct: 110 YS---VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 166
Query: 161 MFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
M +D V P +T +F+ +++G C G EA V+ +M G +V++++ +++
Sbjct: 167 MRSLRDGSLRVSP-DTVTFSTLIDGLCKC-GQIDEACSVFDDMIAGGYVPNVITYNALVN 224
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
KA + + + + M G+ D Y+ ++ A K V +A+ L+ M +G P
Sbjct: 225 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 284
Query: 277 NV-----VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
NV VT+N LI CKA ++A F+EM+ + + P + T+ A +D + + G E
Sbjct: 285 NVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 344
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+L+ M +G P TY L+ + + + E+ +G PD +Y +L++
Sbjct: 345 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 404
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL-----KAHQP 443
AL + ++A Q E+K P+ T +L D + E+ I L K HQP
Sbjct: 405 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 464
Query: 444 QS 445
S
Sbjct: 465 DS 466
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 177/418 (42%), Gaps = 37/418 (8%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
D A F + G A + Y+T+I L K L +E+ P +VT
Sbjct: 15 GDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVT 74
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM- 161
TL I C D+ A + + L++ LC+ + +A L+
Sbjct: 75 YNTL---IDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 131
Query: 162 -----FCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
C DV P N ++N L+G C ++ + E R + S R + D V+FS +
Sbjct: 132 EMTRKSC--DVLP-NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VSPDTVTFSTL 187
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I K + + +FD M G + YNA+++ L K ++ A ++++SM +KGV
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 247
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTG------- 326
P+V+TY+ L+ CKA ++DEA + M RG +P + +I+ G
Sbjct: 248 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNF 307
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E+ L E M QP T+ LI + Q + + + G P+ +Y AL
Sbjct: 308 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 367
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPE--------------PKTDELLQDWSYNKQF 430
+H L +G++EEA Q+ EM +P+ +TD+ LQ S K F
Sbjct: 368 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 159/352 (45%), Gaps = 13/352 (3%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T + T+I L K + D A ++ D+M G P+++T L + C + RA
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL---VNGLCKADKMERAHA 237
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
+ + + L+ A C+ V +A L+ C +V + +FNI+
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G C G+ +A ++ EM + + DV++F +I KA + + D M +G
Sbjct: 298 IAGACKA-GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YNA++H L K +++A ++ M G P+ +TY SL+ LC+A + D+A
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
Q E+ G P TY+ +D + ++G E+ +LE M G QP + T+
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
R ++ + G PD ++ ++++ + +GKL++ E +
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 7/256 (2%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI+L C ++R E EM++ G+ +V+++ II+ K+ +L + LF+++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G D YN +I +L K +++A L M +G PNVVTY+ LI LCK ++
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 295 DEARQAFDEMLQRG--ISPTIRTYHAFLDII---RTGEEVFGLLESMR--KMGCQPTNDT 347
DEAR+ EM ++ + P I TY++FLD + E L+ S+R + P T
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ LI + Q V++++ G P+ +Y AL++ L K+E AH M
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 408 EKQLLPEPKTDELLQD 423
+K + P+ T +L D
Sbjct: 244 DKGVTPDVITYSVLVD 259
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 21/373 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVH 117
G + Y +I L KV + D A LI EM + + P+++T + L C
Sbjct: 102 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL---DGLCKQS 158
Query: 118 DVGRAINAFYAYKRFKFAVGIED--FQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNT 172
A + + V + F L+ LC+ + +A + M + N
Sbjct: 159 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG--YVPNV 216
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++NG C R A + M +G+ DV+++S ++ + KA + + L L
Sbjct: 217 ITYNALVNGLCKADKMER-AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275
Query: 233 QMKRMG-----IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
M G + D+ +N +I K + A +L + M K + P+V+T+ +LI
Sbjct: 276 GMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 335
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPT 344
LCKA +++ AR D M G+ P + TY+A + + ++G EE LE M GC P
Sbjct: 336 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY L+ R + + ++ +E+ G PD +Y L+ L+ +GK E+A
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455
Query: 405 EMKEKQLLPEPKT 417
EM K P+ T
Sbjct: 456 EMVGKGHQPDSFT 468
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 168/372 (45%), Gaps = 23/372 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGE--TGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y++ + L K A L+ +R G P VT TL I C + A +
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL---IDGLCKCGQIDEACSV 203
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F + + + L++ LC+ ++ A ++ +K V P + +++++++ +C
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTP-DVITYSVLVDAFC 262
Query: 184 NIIGSSR--EAERVWMEMSQRG-----ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+SR EA + M+ RG + D V+F+ +I+ KA N + LF++M
Sbjct: 263 K---ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 319
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D + A+I L K V+ A ++ M GV PNVVTYN+L+ LCK+ +++E
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 379
Query: 297 ARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A Q +EM+ G P TY +A RT ++ L+ ++ G P TY +L+
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRT-DDALQLVSELKSFGWDPDTVTYNILV 438
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + V E+ G+ PD ++ A L +G L + + K +L
Sbjct: 439 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML 498
Query: 413 PEPKTDELLQDW 424
P+ T + DW
Sbjct: 499 PDATTCSSILDW 510
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 161/323 (49%), Gaps = 13/323 (4%)
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
L T I I C +G A F ++ F + LLS LC + DA+
Sbjct: 46 GLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQ 105
Query: 159 HL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L M K + + ++N +L+G+C +G EA +++ +RG DVV+++ +I
Sbjct: 106 ALYERMI--KAGYSPDVVTYNTLLHGFCK-VGKLDEALKIFDGAVKRGFVPDVVTYNALI 162
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + KA L + R+ +M + D YN++++ L K V +A L+ +KG +
Sbjct: 163 NGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFS 219
Query: 276 PNVVTYNSLIKPLCK-ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFG 331
PNV+TY++LI LC+ R+L+ ARQ ++M+ G P I +Y+A + + + E
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L S+ + G +P TY +LI + + F++++ + ++G PD +YT I L
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339
Query: 392 LNGKLEEAHQYYMEMKEKQLLPE 414
G++E+A +M EK +P+
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPD 362
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 9/307 (2%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
I F +S LCR + DA+ + K F N ++N +L+G CN G +A+ ++
Sbjct: 50 ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNG-GRMSDAQALY 108
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M + G DVV+++ ++ + K L + L++FD + G D YNA+I+ K
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +A +++ M + + P+VVTYNSL+ LCK ++DEAR ++ +G SP + TY
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITY 225
Query: 317 HAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ + R E LLE M GC+P +Y LI +R + K++ +
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G P+ +Y LI L ++ EA + + + + L P+ T + D VE
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345
Query: 433 RQIASLK 439
+ LK
Sbjct: 346 DALLMLK 352
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 196/471 (41%), Gaps = 88/471 (18%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY+ Y+T++ KV K D A + D P +VT L I +C
Sbjct: 113 KAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNAL---INGFCKAD 169
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ A + + L++ LC+ V +A L+ +K P N +++
Sbjct: 170 KLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV-DKGFSP-NVITYST 227
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C + A ++ +M G D+VS++ +I ++ + + + L+LF + R
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287
Query: 238 GIECDRKVYNAVIHALAK------------------------------------GRLVKD 261
G E + YN +I L K GR V+D
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR-VED 346
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR----------------------- 298
A+ ++K M+EKG P+VV++N++I LCK +++DEA
Sbjct: 347 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 406
Query: 299 ------------QAFDEMLQRGISPTIRTYHAFLDIIRTG------EEVFGLLESMRKMG 340
F EML+RG+ PT+ TY+ +D + +E L ++M + G
Sbjct: 407 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 466
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P TY LI + + + ++ + G P+ +Y +LI L K++EA
Sbjct: 467 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEAL 526
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA----SLKAH-QPQSG 446
+ ++ M EK +P+ T + ++ V++ +A SL+A P SG
Sbjct: 527 ELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +A R ++ +G+C D+ +F+ IS +A + +FD M++ G +R Y
Sbjct: 30 GKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITY 88
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
NA++ L G + DA +L + M + G +P+VVTYN+L+ CK KLDEA + FD ++
Sbjct: 89 NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVK 148
Query: 307 RGISPTIRTYHAFL--------------------------DIIRTGEEVFGLLESMR--- 337
RG P + TY+A + D++ V GL ++ R
Sbjct: 149 RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDE 208
Query: 338 ------KMGCQPTNDTYIMLIKKFSR-WRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
G P TY LI R R+ + ++ ++ NG PD SY ALIH L
Sbjct: 209 ARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNKQF 430
+ EA + + + + PE T D LL++ N+ F
Sbjct: 269 AREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 126/305 (41%), Gaps = 47/305 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY Y+ +I L K + + A+ L + P +T + I C
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT---VFIDGLCKA- 341
Query: 118 DVGRAINAFYAYKRFKFAVGIEDF---QGLLSALCRYKNVQDAEHLMF------CNKDVF 168
GR +A K + D +++ LC+ K V +AE L+ C+ +
Sbjct: 342 --GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 399
Query: 169 PFNT------------------------------KSFNIILNGWCNII--GSSREAERVW 196
FNT ++NI+++G C G +EA ++
Sbjct: 400 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 459
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M ++G DVV++S +I KA L RL M+ G + YN++I L
Sbjct: 460 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL 519
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
V +A+ L +M EKG P+ +TY ++I LCK +D+A FD L+ G+ PT Y
Sbjct: 520 DKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMY 579
Query: 317 HAFLD 321
+ +D
Sbjct: 580 FSLID 584
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ +I L K ++ D A L+ M P+ ++ TL I C
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL---ICGQCRAG 412
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN---VQDAEHLM--FCNKDVFPFNT 172
+A+ F + + + L+ LC+ + +++A L K P +
Sbjct: 413 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP-DV 471
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+++ +++G G +A R+ M +G +V +++ +IS + + L LF
Sbjct: 472 VTYSALIDGL-GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G D Y +I AL K +V A++L E GV P Y SLI LC
Sbjct: 531 AMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVA 590
Query: 293 KLDEA 297
++DEA
Sbjct: 591 RVDEA 595
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 53 LWAGKQS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L +G ++ G + + ++T+I + K+ A EM P++VT IL+
Sbjct: 385 LLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN---ILVD 441
Query: 112 RYCAVHDVGR---AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKD 166
C GR AI F A + + L+ L + + DA L+ K
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
P N ++N +++G C + EA +++ M ++G D +++ IIS K + K
Sbjct: 502 CIP-NVYTYNSLISGLCGL-DKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDK 559
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
L LFD G+ +Y ++I L V +A+ L++
Sbjct: 560 ALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 10/371 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K+ + A L+ ++ G P +V T+ I C V A + +
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTI---IDGLCKDKLVRDAFDLYC 213
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + L+ C + A L+ K+V P N +FN +++G C
Sbjct: 214 EMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNP-NVCTFNTLVDGLCKE 272
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G REA+ + M + G+ DV +++ ++ Y + K +F+ M +MG+ CD
Sbjct: 273 -GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHS 331
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ +I L+K +++ +A+ L + M + V P+VV Y+SLI LCK+ +++ A + DEM
Sbjct: 332 YSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMH 391
Query: 306 QRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG P + TY + +D + +V LL+ ++ G Q TY +L+ + +
Sbjct: 392 DRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLT 451
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ KV+ ++ G+ D +Y+ +I+ L +EA +M++K +P+ E +
Sbjct: 452 DAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETII 511
Query: 423 DWSYNKQFVER 433
+ + K ++
Sbjct: 512 NAFFEKDMNDK 522
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 138/313 (44%), Gaps = 38/313 (12%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
TL ILI YC + + A + F + + I + L+ LC N Q E L F +
Sbjct: 86 TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCL--NGQVKESLNFHD 143
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + +GI D VS+ +I+ K
Sbjct: 144 R---------------------------------LVSQGIKLDHVSYGTLINGLCKIGQT 170
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LRL +++ D +YN +I L K +LV+DA L M EK V PNVVTY SL
Sbjct: 171 GPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSL 230
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGC 341
I C +LD+A +EM+ + ++P + T++ +D + + G+ E L+ M K G
Sbjct: 231 IYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGV 290
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY L+ + ++ G V+N +++ G D SY+ +I L L+EA
Sbjct: 291 GPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMD 350
Query: 402 YYMEMKEKQLLPE 414
+ M+ + ++P+
Sbjct: 351 LFEGMRNENVIPD 363
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
S++ TLL+ + ++ ++ AI++F R + I F +L +L + K+
Sbjct: 10 SIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVI 69
Query: 159 HLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
HL F ++ N + NI++N +C++ A V+ ++ + G D+++++ +I
Sbjct: 70 HL-FQRMELHGIQSNYITLNILINSYCHL-RQINSAFSVFAKILKLGYQPDIITYTTLIR 127
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ + L D++ GI+ D Y +I+ L K A+ L++ +E + P
Sbjct: 128 GLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRP 187
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLL 333
+VV YN++I LCK + + +A + EM ++ + P + TY + + I+ ++ FGLL
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M P T+ L+ + + + + + G GPD +Y AL+ FL
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307
Query: 394 GKLEEAHQYYMEMKE 408
+ +A + M +
Sbjct: 308 KEAGKAKNVFNIMAQ 322
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 42/276 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ L K K A +L+ M GP + T L+ Y V + G+A N F
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALM---DGYFLVKEAGKAKNVFN 318
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + ++S L + K + +A L N++V P + +++ +++G C
Sbjct: 319 IMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP-DVVAYSSLIDGLCKS 377
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A + EM RG +V++++ +I K+ + K + L ++K GI+ +
Sbjct: 378 -GRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 436
Query: 246 YNAVIHALAK-GRLVK----------------------------------DAISLMKSME 270
YN ++ L K GRL +A++L+ ME
Sbjct: 437 YNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+KG P+ + Y ++I + D+A + EM+
Sbjct: 497 DKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
NL+ + F++M RM + ++ +L K + I L + ME G+ N +T N
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKM 339
LI C R+++ A F ++L+ G P I TY + + G+ E + +
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G + + +Y LI + Q G ++ +I PD Y +I L + + +A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 400 HQYYMEMKEKQLLPEPKT 417
Y EM EK++ P T
Sbjct: 209 FDLYCEMFEKRVFPNVVT 226
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 14/343 (4%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ D A + I E P T TL + C + A+ A I
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTL---VNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERV 195
+ L+S LC+ +++A ++ ++D P N ++N I++ C N + + E R+
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSP-NAVTYNAIISSLCKENRVDEATEIARL 403
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
++ +GI DV +F+ +I + N + LF++MK G D YN +I +L
Sbjct: 404 ---LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
R +++A++L+K ME G A NVV YN+LI CK ++++EA + FDEM +G+S T
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520
Query: 316 YHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ +D + + E+ L++ M G +P TY L+ F + + ++
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+G PD +Y LI L G+++ A + ++ K ++ P
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 172/407 (42%), Gaps = 17/407 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPS 99
+ D AA F WA KQ + S+ Y ++ LGK F+ +++EM+ G E
Sbjct: 74 QTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCE---- 129
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYK-RFKFAVGIEDFQGLLSALC---RYKNVQ 155
+ LI + Y + + ++ + LL+ L + K V+
Sbjct: 130 -FDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVE 188
Query: 156 DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
A M + + +FNI++ C R A + EM G+ D +F+ I+
Sbjct: 189 SAHSSMVRRR--IRHDVSTFNILIKALCKA-HQVRPAILMMEEMPSYGLSPDETTFTTIM 245
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
Y + NL LR+ +QM G C N +I+ K + A+S ++ +G
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFR 305
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
P+ TYN+L+ LCK A + D ML G+ P I TY++ + + + G EE +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L+ M C P TY +I + + ++ ++ G PD ++ +LI L L
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
+ + A + EMK K P+ T +L D + + +E + LK
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 11/310 (3%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHL 160
T ILI+ C H V AI + + F ++ N+ A E +
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ + P + N+++NG+C G +A E G D +++ +++ K
Sbjct: 265 V---EYGCPCTDVTVNVLINGFCKQ-GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ + + D M G++ D YN++I L K +++A+ ++ M + +PN VT
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMR 337
YN++I LCK ++DEA + + +GI P + T+++ + + + L E M+
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC+P TY MLI R+ + E+ NG + Y LI N ++E
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500
Query: 398 EAHQYYMEMK 407
EA + + EM+
Sbjct: 501 EAEEIFDEME 510
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 151/338 (44%), Gaps = 29/338 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I+ L K + D A + + P + T +L I+ C + A++ F
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL---IQGLCLSSNHKSAMDLFE 437
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
K + L+ +LC + +++A +L+ C ++V +NT +++G
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT-----LIDG 492
Query: 182 WCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+C + R EAE ++ EM +G+ D V+++ +I K++ + +L DQM G+
Sbjct: 493 FCK---NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D+ YN+++ K +K A ++++M G P++VTY +LI LCKA ++ A +
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRT------GEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ +G+ + T HA+ +I+ E L M P TY ++ +
Sbjct: 610 LLRSIQMKGM---VLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYR 666
Query: 354 KFSR-WRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
G E+ E GN P+ SS+ L L
Sbjct: 667 GLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 43/261 (16%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G A + Y+T+I K ++ + A + DEM VT T
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT------------- 523
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
L+ LC+ K V+DA LM + + P + ++N
Sbjct: 524 -------------------------LIDGLCKSKRVEDAAQLMDQMIMEGLRP-DKFTYN 557
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L +C G ++A + M+ G D+V+++ +IS KA + RL ++
Sbjct: 558 SLLTHFCK-TGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK-ARKLD 295
G+ YN VI AL K +A+ L + M +K P+ +TY + + LC +
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIG 676
Query: 296 EARQAFDEMLQRGISPTIRTY 316
EA EM++RG P ++
Sbjct: 677 EAVDFTVEMIERGNIPEFSSF 697
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 189/399 (47%), Gaps = 22/399 (5%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVT 102
+E A+ F A Q G ++ Y ++I LGK D A+ L + M G P + T
Sbjct: 442 FEPAYEMFETA-SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLM 161
LIR + +H GR + +K D L + + C +K D E
Sbjct: 501 S-----LIRNF-FMH--GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK-AGDVEKGR 551
Query: 162 FCNKDV----FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+D+ F + +S++I+++G G +RE ++ M Q+G D +++ ++
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKA-GQARETSSIFHAMKQQGFALDARAYNAVVDG 610
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K+ L K + ++MK + Y ++I LAK + +A L + + KG+ N
Sbjct: 611 FCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELN 670
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---E 334
V+ Y+SLI K ++DEA +EM+++G++P + T+++ +D + EE+ L +
Sbjct: 671 VIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQ 730
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
SM++M C P TY +LI R +++ F W E+ + G P+ +YT +I L G
Sbjct: 731 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
+ +A + K P+ + + L++ S+ + +E
Sbjct: 791 NITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIE 829
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 198/430 (46%), Gaps = 21/430 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + T++ L + + + A AL+DE++G P +V + I +
Sbjct: 209 QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYN---VCIDCFGKA 265
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+V A F+ K + ++ LC+ + +AE L + P +
Sbjct: 266 GNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC-AYA 324
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G+ + G A ++ ++ +RG VVSF+ I++C K R + + L LF+ M
Sbjct: 325 YNTMIMGYGSA-GQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+ E + YN +I L V++A + ME G+ PN++T N ++ LCKA+K
Sbjct: 384 KK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKF 442
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+ A + F+ QRG +P TY + +D + + G ++ + L E+M G Y L
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I+ F + + K++ E++ G PD + + +F G +E+ + ++K
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562
Query: 412 LPEPKTDELL----------QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDRE 461
LP+ ++ +L ++ S +++Q +L A + + S K D+ E
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 462 FLQQPETRRV 471
L++ + +RV
Sbjct: 623 VLEEMKVKRV 632
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 186/478 (38%), Gaps = 90/478 (18%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V VL +RN AA FFL + S + Y+ ++ L +++EM
Sbjct: 84 VIPVLRTLRNPSLAA-PFFLASSAASPHPLPADAYNAVLPFLS--HDLAAMEKVLEEMSV 140
Query: 94 ---GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
G P+ + L+ RR + D R I A +R KF + L+ A+
Sbjct: 141 LGYGVPNPACADLVSALVRTRR---LDDAERVIAAM---RRLKFRPAFSAYTVLIGAMAE 194
Query: 151 YKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY--D 207
+ + A L+ ++V + F ++ R + + +G C D
Sbjct: 195 ARQPERALELLRQMQEVGYEVGVPLFTTLVRALAR---EGRVEGALALVDEVKGSCLEPD 251
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRL-------- 258
+V ++ I C+ KA N+ + F ++K G++ D Y ++I L K GRL
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311
Query: 259 --------------------------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++A L+ ++E+G P+VV++NS++ L K R
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371
Query: 293 KLDEARQAF----------------------------------DEMLQRGISPTIRTYHA 318
K+DEA F DEM G+ P + T +
Sbjct: 372 KVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNI 431
Query: 319 FLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + + E + + E+ + GC P + TY LI + + ++++ + + G
Sbjct: 432 MVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+ + YT+LI F++G+ E+ H+ + EM + P+ D + VE+
Sbjct: 492 HNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK 549
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 151/338 (44%), Gaps = 28/338 (8%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS---SREAER---VWM 197
L+SAL R + + DAE ++ + + F + + +IG+ +R+ ER +
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRL------KFRPAFSAYTVLIGAMAEARQPERALELLR 206
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M + G V F+ ++ ++ + L L D++K +E D +YN I K
Sbjct: 207 QMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 266
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V A ++ +G+ P+ V+Y S+I LCKA +L EA + F +M P Y+
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 318 AFLDIIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
I+ G E + LL+ +++ GC P+ ++ ++ + R+ ++ +
Sbjct: 327 TM--IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYN 427
++ P+ S+Y +I L + GK+EEA+ EM+ L P T D L + +
Sbjct: 385 KDAE-PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFE 443
Query: 428 KQFVERQIASLKAHQPQSGQNTRVI---SKKSDQDREF 462
+ + AS + P S +I KK + D +
Sbjct: 444 PAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAY 481
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR-- 112
A KQ G+A R Y+ ++ K K D A+ +++EM+ P++ T +++ + +
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 113 -----------------------YCAVHD----VGRAINAFYAYKRF---KFAVGIEDFQ 142
Y ++ D VGR A+ + + +
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWCNIIGSSREAERVWME 198
L+ AL + + + +A + C + + NT +++I++NG C + ++ A W E
Sbjct: 711 SLMDALVKAEEINEA---LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK-AFVFWQE 766
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++G+ +VV+++ +I+ +K N+ LF++ K G D +NA+I ++
Sbjct: 767 MQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANR 826
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+A + + KG NV SL+ L KA L++A
Sbjct: 827 AIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 14/362 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ MI + KV + D A+ L M P + T I+I C + + A
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN---IMISGACRANRIDDARQLLE 435
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ + ++S LC+ V +A + + N F + + + +++G C
Sbjct: 436 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF-LDVVTCSTLIDGLCK- 493
Query: 186 IGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S R +AE++ EM + G DVV+++ +I + KA L K L F +M G
Sbjct: 494 --SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ VI L K V+D L+K+M E+GV P+ + Y S+I LCK+ DEA + +
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611
Query: 304 MLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M Q G +PT+ TY+ +D + +E LLE M GC P TY + F + +
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
F+++ + G P Y+ L+ L K+++A + + E E +P+
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRT 731
Query: 421 LQ 422
LQ
Sbjct: 732 LQ 733
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 197/477 (41%), Gaps = 80/477 (16%)
Query: 21 KIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRK 80
++ E G + +V VL + +D + A FF W Q GY HS + +++ + +K
Sbjct: 89 RLCEFGGYLVPSVVGRVLQQL-DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKK 147
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLL--------------------------------I 108
A+ L R G P +T TL+
Sbjct: 148 AQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT 207
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFK--FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCN 164
+I+ C D GR +A Y+ + A + + L+ ALC+ + DA ++
Sbjct: 208 IIKGLC---DNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIE 264
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
P N ++N ++NG+C +G+ EA ++ +M + DV +++ +I Y K
Sbjct: 265 AGCAP-NVVTYNTLINGFCK-LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 322
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS---------------- 268
+L +M + G E + YN ++ +L K DA +L +
Sbjct: 323 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 382
Query: 269 -------------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
M ++G P++ TYN +I C+A ++D+ARQ + M + G
Sbjct: 383 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 442
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY++ + + +E + + E +R G T LI + R+ + K
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ NG+ PD +YT LIH +L+++ ++ EM +K +P T ++ D
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 559
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 166/372 (44%), Gaps = 12/372 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G A + Y+T+I K+ D A L ++M P + T ILI YC
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN---ILIDGYCKQE 320
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
++ + L+ +L + DA +L M +D P + +F
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF-TF 379
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N++++ +C + G A ++ M+ RG D+ +++ +IS +A + +L ++M
Sbjct: 380 NLMIDMFCKV-GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D YN+++ L K V +A + + + G +VVT ++LI LCK+R+LD
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 296 EARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A + EM + G +P + Y H F + ++ M GC PT TY ++
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQL-DKSLAFFSEMLDKGCVPTVITYSIV 557
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I K + + + + + E G PD YT++I L + +EA++ Y MK+
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617
Query: 412 LPEPKTDELLQD 423
P T +L D
Sbjct: 618 APTVVTYNVLVD 629
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 164/371 (44%), Gaps = 43/371 (11%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
YA + +E+ + +L F+ A + E GG PS+V R + D+
Sbjct: 66 YAQAAKEF---LRVLDSSEDFELASRRLCEF-GGYLVPSVVG--------RVLQQLDDLD 113
Query: 121 RAINAF------YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVF 168
+A+ F YK KF LLSA R K Q+A L C+ D
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNC-----LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSI 168
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
++T ++NG+C ++A R+ EM +RGI ++ II + L
Sbjct: 169 TYST-----LINGFCKA-RDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222
Query: 229 RLFDQMKRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ M+R C V Y ++ AL K + DA +++ M E G APNVVTYN+LI
Sbjct: 223 VHYRDMQR---NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 279
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQP 343
CK +DEA F++ML+ SP + TY+ +D E + LL+ M K GC+P
Sbjct: 280 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 339
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY L+ + ++ + F + + P ++ +I G+L+ A++ +
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 399
Query: 404 MEMKEKQLLPE 414
M ++ LP+
Sbjct: 400 QLMTDRGCLPD 410
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 38/264 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ GY T+I L K R+ D A L+ EM + P +V ILI +C
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT---ILIHGFCKA 529
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ +++ AF+ +E L +K P +++
Sbjct: 530 DQLDKSL-AFF-----------------------------SEML---DKGCVP-TVITYS 555
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+++ C R+ + M +RG+ D + ++ +I K+ + + L+ MK+
Sbjct: 556 IVIDKLCK-SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G YN ++ L K + +AI L++ ME G P+ VTYNS+ K+ + D+
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL 320
A + F M RG SPT Y L
Sbjct: 675 AFRLFQAMKSRGCSPTPFMYSLLL 698
>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 475
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 179/428 (41%), Gaps = 67/428 (15%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDW---------EAAFTF 51
A ++DILR+ + + + E ++VS LV EVL+ + + + + F
Sbjct: 82 AARVLDILRQ-DGPGFDAKAALSELDLRVSGLLVREVLAGILRNIGIDNKTRCAKLGYKF 140
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG-PSLVTKQTLLILI 110
F+W+ +Q Y H+ YH ++ I +F W L+DEM E G P+ T +T ILI
Sbjct: 141 FIWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMV--ENGFPT--TARTFNILI 196
Query: 111 RRYCAVHDVGRA---INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
C G A + F K F +
Sbjct: 197 ---CTCGGAGLARKVVERFIKSKTFNYR-------------------------------- 221
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
PF S+N IL I + E V +M G C D ++++ ++ + LH
Sbjct: 222 -PFK-HSYNAILLSLL-AIREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHF 278
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RL D+M R G D YN ++H L KG A+ L+ M+E G P+++ + +LI
Sbjct: 279 HRLLDEMGRSGFSPDFHTYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDG 338
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------G 340
L +A LD FDEM++ G P + Y ++ TG V G LE R++ G
Sbjct: 339 LSRAGNLDACNYFFDEMIKNGFVPDVVCY----TVMITGYIVAGELEKAREIFDEMIARG 394
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P TY +I+ +F + E+ G P+ Y L++ L GKL EA
Sbjct: 395 QLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTLVNNLRNAGKLSEAR 454
Query: 401 QYYMEMKE 408
+ EM E
Sbjct: 455 EVIKEMAE 462
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R+ EM + G +F+ +I A KV+ F + K + YNA++ +L
Sbjct: 175 RLLDEMVENGFPTTARTFNILICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSL 234
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
R K + + M +G P+ +TYN L+ + KL + DEM + G SP
Sbjct: 235 LAIREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDF 294
Query: 314 RTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY+ L ++ G + LL M+++G P+ + LI SR ++E
Sbjct: 295 HTYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDE 354
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +NG PD YT +I + G+LE+A + + EM + LP T
Sbjct: 355 MIKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFT 401
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 53/264 (20%)
Query: 54 WAGKQ---SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
W +Q GY T Y+ ++ ++ K L+DEM P T LL
Sbjct: 245 WVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILL--- 301
Query: 111 RRYCAVHDVGR------AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
H +G+ A+ K F I F L+ L R N+ DA
Sbjct: 302 ------HVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNL-DA------- 347
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
CN + EM + G DVV ++ +I+ Y A L
Sbjct: 348 ------------------CNYF---------FDEMIKNGFVPDVVCYTVMITGYIVAGEL 380
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K +FD+M G + YN++I L ++A ++K M +G PN + YN+L
Sbjct: 381 EKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTL 440
Query: 285 IKPLCKARKLDEARQAFDEMLQRG 308
+ L A KL EAR+ EM + G
Sbjct: 441 VNNLRNAGKLSEAREVIKEMAENG 464
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 9/358 (2%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF FF ++ + S + S+ + + IL ++R FD AW L++E++ +T PSL+T +++
Sbjct: 95 AFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQ--QTHPSLLTLKSMS 152
Query: 108 ILIRRYCAVHDVGRAINAFYAYKR---FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
I++ R + AF ++ F G +F LL A C + +++A +
Sbjct: 153 IMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKM 212
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
F NTK+ NI+L G+ G E + EM +RG + V+++ I Y K
Sbjct: 213 HSRFSPNTKTMNILLLGFKES-GDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCF 271
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LRL ++M++ + +IH + + A L + + + P++ YN+
Sbjct: 272 GDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAF 331
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGC 341
+ L ++R++ A DEM + GI TYH F ++R+ E V L M +
Sbjct: 332 MSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNF 391
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P T +ML+K F + +Q +W + + G P + L+ L +GK++EA
Sbjct: 392 VPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEA 449
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKR---MGIECDRKVYNAVIHALAKGRLVKDAISLM 266
S S ++S +K ++ L F +M++ G E +N ++ A R +K+A S+
Sbjct: 150 SMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVF 209
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M + +PN T N L+ ++ + + EM++RG P TY+ +D
Sbjct: 210 HKMHSR-FSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAY-CK 267
Query: 327 EEVFG----LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ FG LLE M K C PT +T LI + +++NEIS PD
Sbjct: 268 KGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGV 327
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEK 409
Y A + +L + +++ A EM+E+
Sbjct: 328 YNAFMSSLIRSREVQSALMLMDEMEEE 354
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 176/360 (48%), Gaps = 13/360 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QSG T ++ ++ K ++ D+ W L +EM+ P+++T ILI C
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYS---ILIDAVCKCG 173
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
V +A+ F K I + ++ L + +V A F +++ + +
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKA---FFLFEEMTSEGLVATRV 230
Query: 178 ILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ N + +G S A+ +++ EM +G+ D V+F+ ++ A + R+F +
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ +G D +YN +I L K + + +A + +EE G+ P+V T+N+L+ LCK+ ++
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
+A +M + G +P + Y+ +D +R EE LL M+ +G +P TY L
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + + +++ EIS G + +Y +++ L + G+++EA++ + MK++ +
Sbjct: 411 IDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 16/384 (4%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A+ FF W Q G S R T++ +LG R+F+ A ++ E+ ++ + +
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRY---ILQPRIFI 58
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNK 165
L R Y + + +++ A + + A+ + L+ A + Q A + +
Sbjct: 59 ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS 118
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKAR 222
+ P +T +FN+++N + ++ + VW EM + +V+++S +I K
Sbjct: 119 GLRP-DTYTFNVLMNAF----KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ K L++F MK G + Y ++I L K V A L + M +G+ V YN
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKM 339
SLI L ++ + D A + F EML +G+ P T+ + L + E + + R +
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
GC + Y +LI + ++ ++++ E+ E+G PD ++ AL+ L +G++ +A
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
+MK P+ L D
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLID 377
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 26/305 (8%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A FL K G + Y +MI LGK D A+ L +EM T LV +
Sbjct: 176 EKALKVFLDM-KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM----TSEGLVATRV 230
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFK--FAVGIE----DFQGLLSALCRYKNVQDAEH 159
+ + +H +GR+ A A K F+ + G++ F L+ L +A
Sbjct: 231 VYNSL-----IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARR 285
Query: 160 LMFCNKDV-FPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIIS 216
+ +DV + +N++++ C S R EA ++ E+ + G+ DV +F+ ++
Sbjct: 286 IFQEARDVGCALDVNLYNVLIDTLCK---SKRLDEAWEIFGELEEDGLVPDVYTFNALMD 342
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K+ +H L MKR G D VYN +I L K V++A L+ M+ G P
Sbjct: 343 GLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEP 402
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLL 333
+VVTYN+LI CK ++++A + F+E+ +G + T+ TY+ L+ + G +E + L
Sbjct: 403 DVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLF 461
Query: 334 ESMRK 338
M++
Sbjct: 462 NGMKQ 466
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 17/283 (6%)
Query: 51 FFLWAGKQSGYAHSTRE-YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
FFL+ S +TR Y+++I LG+ + D A L EM P VT +L+
Sbjct: 214 FFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVY- 272
Query: 110 IRRYCAVHDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNK 165
+ GRA A F + A+ + + L+ LC+ K + +A E +
Sbjct: 273 -----GLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE 327
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + +FN +++G C G +A + +M + G DV ++ +I K+ +
Sbjct: 328 DGLVPDVYTFNALMDGLCKS-GRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +L +M+ +G E D YN +I KG ++DA+ L + + KG A N VTYN+++
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTIL 445
Query: 286 KPLCKARKLDEARQAFDEMLQRG----ISPTIRTYHAFLDIIR 324
LC A ++DEA + F+ M Q I P TY L+ R
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGAR 488
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 185/417 (44%), Gaps = 14/417 (3%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
LW + + + + ++ L K +FDT W + +M P++VT TL I
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL---IDG 202
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
C D +A F K + + L+ LC + +AE + N + P
Sbjct: 203 CCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP- 261
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N +++G+C I ++A ++ EM G+ +VV+F +I K + +
Sbjct: 262 NLYTYNTMMDGYCKI-AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M G+ + VYN +I K + +A+SL +E+ + P+V TY+ LIK LC
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+++EA EM ++G P TY+ +D + G E+ + M + G +P T
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ LI + + + ++ E+ G PD +YTALI F +G +EA + + EM+
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQ 464
E L P T L D + I K ++G +T SK ++ DR Q
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAI---KLFLAKTGTDT-TGSKTNELDRSLYQ 553
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 214 IISCYSKARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS---- 268
I++C R ++ L LF + +R + + ++Y+A+IH L +L A LM+
Sbjct: 44 ILTC----RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQC 99
Query: 269 -------------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+E PNV + LI + ++EA + +M +
Sbjct: 100 LQNSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DV 154
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P ++ + LD +++ G + ++ + M G P TY LI R F F+
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++E+ E P YT LI L ++ EA + M+ +LP T + D
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 185/404 (45%), Gaps = 37/404 (9%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQ 104
+ F FF + Q G+ + Y + L F A +LI+ + R G+ S V
Sbjct: 100 SIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFIS 159
Query: 105 TLLILIRRYCAV---------HDVG---RAINAFYAYKRFKFAVGIEDFQGLLSALCR-- 150
+ + + C D+G AI F ++ +F V I LL + +
Sbjct: 160 LVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLN 219
Query: 151 --------YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
Y + DA FP N FNI++N +C G+ +A++V+ E+++R
Sbjct: 220 PTGTIWGFYMEILDAG---------FPLNVYVFNILMNKFCKE-GNISDAQKVFDEITKR 269
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
+ VVSF+ +I+ Y K NL + RL QM++ D Y+A+I+AL K + A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
L M ++G+ PN V + +LI + ++D ++++ +ML +G+ P I Y+ ++
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 322 IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G+ V +++ M + G +P TY LI F R ++ E+ +NG D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
R ++AL+ + G++ +A + EM + P+ T ++ D
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 15/260 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K K D A L DEM P+ V TL+ H I+
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI-------HGHSRNGEIDLMK 365
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
+ + G++ + L++ C+ ++ A +++ + + P + ++ +++G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP-DKITYTTLIDG 424
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C G A + EM Q GI D V FS ++ K + R +M R GI+
Sbjct: 425 FCRG-GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y ++ A K + L+K M+ G P+VVTYN L+ LCK ++ A
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 302 DEMLQRGISPTIRTYHAFLD 321
D ML G+ P TY+ L+
Sbjct: 544 DAMLNIGVVPDDITYNTLLE 563
>gi|356575965|ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 1 [Glycine max]
gi|356575967|ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 2 [Glycine max]
Length = 480
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 175/421 (41%), Gaps = 51/421 (12%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEA---------AFTF 51
AK ++++LR+ + R + E ++ S LV EVL + + A+ F
Sbjct: 84 AKRVLEVLRQ-DGPGLDARLVLGELHVRPSGLLVREVLFGILKNINCQNKTRCAKLAYKF 142
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F+W +Q GY H+ YH +++I + +F W L+DEM E G T +T ILIR
Sbjct: 143 FVWCSQQEGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMI--EKGLP-ATARTFNILIR 199
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
+ F K F F PF
Sbjct: 200 TCGEAGLAKNLVERFIKSKTFNFR---------------------------------PFK 226
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N IL+G ++ + E V+ +M G D+++++ ++ + L + RL
Sbjct: 227 -HSYNAILHGLL-VLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLL 284
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M R G D +N ++H L KG A++L+ M E G+ P V+ + +LI L +A
Sbjct: 285 DEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRA 344
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ---PTNDTY 348
LD + FDEM++ P + Y + E+ LE + M + P TY
Sbjct: 345 GNLDACKYFFDEMIKNECRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTY 404
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+I+ +F + E+ G P+ Y L L GK +AH+ +M E
Sbjct: 405 NSIIRGLCMAGKFDEACSMLKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTE 464
Query: 409 K 409
K
Sbjct: 465 K 465
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 3/223 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R+ EM ++G+ +F+ +I +A ++ F + K + YNA++H L
Sbjct: 177 RLVDEMIEKGLPATARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGL 236
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K + + M G +++TYN ++ + KLD+ + DEM + G SP
Sbjct: 237 LVLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDF 296
Query: 314 RTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
T++ L ++ G++ LL MR+MG +PT + LI SR ++E
Sbjct: 297 HTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDE 356
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +N PD +YT +I + G++E+A + Y +M ++ +P
Sbjct: 357 MIKNECRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVP 399
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 174/403 (43%), Gaps = 30/403 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A+N F+ + F L++ LCR + +A
Sbjct: 147 PDVVTFNTLL---HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D ++ I++G C I G + A + +M + I +VV +S II
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKI-GDTVSALDLLRKMEEISHIIPNVVIYSAII 262
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ GI D YN++I DA L++ M E+ ++
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVTYN+LI K K EA + +DEML RGI P TY + +D + E +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 383 FYL---MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
+L G L A EM L P+ T D LL N + +++ L
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A P +G Q ++ + +FL+ E + H+G
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM---IDGFCKQNRLDAAEHMFY 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+ ++
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF-YLV 443
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + EM G+C D+V+ ++ L L +F M++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 175/402 (43%), Gaps = 57/402 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L + + A AL+D M P+ +T T+ + C + D A++
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI---VDGMCKIGDTVSALDLLR 243
Query: 128 AYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + + ++ +LC+ DA++L K +FP + ++N ++ G+C+
Sbjct: 244 KMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCS 302
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE++ EM +R I DVV+++ +I+ + K + L+D+M GI +
Sbjct: 303 S-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----- 299
Y+++I K + A + M KG +PN++T+N+LI C A+++D+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 300 ---------------------------AFD---EMLQRGISPTIRTYHAFLD------II 323
A D EM+ G+ P I T LD +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 324 RTGEEVFGLLESMRK--------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+F +++ +K G +P TY +LI +F +++ E+ G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y+++I L +L+EA Q + M K P T
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%), Gaps = 13/265 (4%)
Query: 182 WCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C ++G ER ++ +M ++ I D+ SF+ +I C+ L L F ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G+ D +N ++H L V +A++L M E PNVVT+ +L+ LC+ ++
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRKM----GCQPTNDTYIM 350
EA D M++ G+ PT TY +D + + G+ V L+ +RKM P Y
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV-SALDLLRKMEEISHIIPNVVIYSA 260
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + + + ++ E+ E G PD +Y ++I +G+ +A Q EM E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 411 LLPEPKT-DELLQDWSYNKQFVERQ 434
+ P+ T + L+ + +F E +
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAE 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 42 RNDWEAA-FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+N +AA F+L A K G + + ++T+I ++ D L+ EM ETG L
Sbjct: 373 QNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT--ETG--L 426
Query: 101 VTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V T LI + V D+ A++ I LL LC ++DA
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 160 LMF-----CNKDV---FPFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
MF KD+ PFN +++NI+++G N G EAE ++ EM RGI
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE-GKFLEAEELYEEMPHRGIVP 544
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++S +I K L + ++FD M + + +I+ K V D + L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M +G+ N +TY +LI K ++ A F EM+ G+ P T L + +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 327 EEV 329
EE+
Sbjct: 665 EEL 667
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F ++ + V+ L+ +M+R I CD + +I + A+S
Sbjct: 79 VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG 138
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G+ P+VVT+N+L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QPT TY ++ + + + ++ E + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIY 258
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I +L +G+ +A + EM+EK + P+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
>gi|413953911|gb|AFW86560.1| hypothetical protein ZEAMMB73_703962 [Zea mays]
Length = 287
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 15/245 (6%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR----------LFDQMKRMGIEC 241
A++ +M GI ++V+++ +++ + +LH R L +M+ GIE
Sbjct: 2 AKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEP 61
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y+ ++H ++ + + + +SM+E+G+ P V TY S+IK L +L++
Sbjct: 62 DVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILL 121
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ-----PTNDTYIMLIKKFS 356
DEM+ G+ P+ TY+ FL R ++V LE KM P TY +L+ FS
Sbjct: 122 DEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFS 181
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + G V +W+++ E+ GPD SYT LIH + K EA Q++MEM EK LP+
Sbjct: 182 KLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKI 241
Query: 417 TDELL 421
T E L
Sbjct: 242 TFETL 246
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG--IECDRK 244
G + E + EM G+C +++C + Y +++ L L+++MK G D
Sbjct: 112 GRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIH 171
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++ +K + + M E V P++ +Y LI C ++K EA Q F EM
Sbjct: 172 TYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEM 231
Query: 305 LQRGISPTIRTYHAFL------DIIRT 325
+++G P T+ D++RT
Sbjct: 232 IEKGFLPQKITFETLYRGLIQADMLRT 258
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 19/368 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y+++I K+ A + +R G + + T LI C D+
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQI---LRDGAFKGFVPDESTYCSLINGLCQDGDI 371
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
RAIN F + L+ L + + A LM C+ D++
Sbjct: 372 DRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIW----- 426
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N+++NG C I G +A+ + ++ +G DV +F+ +I Y K L + + D+
Sbjct: 427 TYNLVINGLCKI-GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+ D YN++++ L K +D + K M EKG PN++TYN L + CKARK
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ----PTNDTYI 349
++EA +EM +G++P + + + ++ G + +++ Q T TY
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++I F+ K++N++ ENG PD +Y +I G + + + + EK
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665
Query: 410 QLLPEPKT 417
L+P T
Sbjct: 666 GLIPSLTT 673
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 156/345 (45%), Gaps = 43/345 (12%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T+ I I+ +C + AI R + + L+ LC+ V +AEH +
Sbjct: 253 TVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKM 311
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
N+ P + ++N I++G+C + G + A+++ + + +G D ++ +I+ +
Sbjct: 312 VNEGYEP-DGFTYNSIIDGYCKL-GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
++ + + +F++ G++ + + N ++ L++ L+ A+ LM M E G +P++ TYN
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429
Query: 283 SLIKPLCKAR-----------------------------------KLDEARQAFDEMLQR 307
+I LCK KLD A + D M
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489
Query: 308 GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+SP + TY++ L+ + + G E+V G + M + GC P TY +L + F + R+
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ E+ G PD ++ L+ NG L+ A+Q + + E+
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 186/464 (40%), Gaps = 79/464 (17%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+ V+ + +N +A F K+ G+ H+ Y MI LG +F+ ++ E R
Sbjct: 10 VAAVVKYQKNPLKA-LEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRM 68
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
L + + +R Y + A++ F F ++ + +++ L Y+
Sbjct: 69 NIDNGLL--EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRY 126
Query: 154 VQDAEHLMFCNKD--------VFPFNTKSF--------------NIILNG-------WCN 184
A + +D F KSF N+ G +C
Sbjct: 127 FDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCT 186
Query: 185 IIGS------SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+IG EA ++ EM GIC D+++F+ +I + ++ + RL +++ + G
Sbjct: 187 VIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG 246
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + N I + ++ +AI L+ + +G+ P+V+TYN+LI LCK K+ EA
Sbjct: 247 VSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAE 305
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-------------IIRTG--------EEVFGLL---- 333
+M+ G P TY++ +D I+R G E + L
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365
Query: 334 --------------ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
E+M K G +P L+K S+ K+ NE+SENG PD
Sbjct: 366 CQDGDIDRAINVFNEAMEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y +I+ L G + +A ++ K LP+ T L D
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ ++T+I K K D A ++D M P ++T ++L C
Sbjct: 455 GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL---NGLCKAGKY 511
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ F I + L + C+ + V++A +L+ NK + P + +F
Sbjct: 512 EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTP-DVVNFGT 570
Query: 178 ILNGWCN---IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ G+C+ + G+ + +RV Q + + +++ +I+ ++ N++ +LF++M
Sbjct: 571 LMKGFCDNGDLDGAYQLFKRVD---EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKM 627
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G D Y +I K + S + EKG+ P++ T+ ++ LC R++
Sbjct: 628 CENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRV 687
Query: 295 DEARQAFDEMLQRGISPTI 313
EA M+ +GI P +
Sbjct: 688 HEAVGIIHLMVHKGIVPEV 706
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 15/294 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWAL-IDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++G + Y+ +I L K+ A L ID + G P + T TL I YC
Sbjct: 418 ENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL-PDVFTFNTL---IDGYCKK 473
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTK 173
+ AI + + + +L+ LC+ Y++V LM K P N
Sbjct: 474 LKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM-EKGCVP-NII 531
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI+ +C EA + EM +G+ DVV+F ++ + +L +LF +
Sbjct: 532 TYNILTESFCKA-RKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590
Query: 234 M-KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ ++ YN +I+A A + A L M E G +P+ TY +I CK
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
++ +++G+ P++ T+ L+ + R E G++ M G P
Sbjct: 651 NINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y++++ L K K++ M P+++T IL +C V
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN---ILTESFCKARKV 546
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD---VFPFNTKSFN 176
A+N + + +F L+ C ++ D + +F D F ++N
Sbjct: 547 EEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDL-DGAYQLFKRVDEQYKFSHTIATYN 605
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++N + + + AE+++ +M + G D ++ +I + K N++
Sbjct: 606 IMINAFAGKLNMNM-AEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIE 664
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
G+ + V++ L R V +A+ ++ M KG+ P VV
Sbjct: 665 KGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 6/323 (1%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
I I+ + A ++ A+ F + F G+E F LL AL + ++A + +D
Sbjct: 6 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR 65
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ + +S+ ++ WCN + EA RVW EM + G+ DVV + +I + + +
Sbjct: 66 YAPDLRSYTALMLAWCNA-RNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEA 124
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+++F+ MK G + Y +I K + A+ + M++ G P+V TY L+
Sbjct: 125 VKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVG 184
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPT 344
A+++D +EM Q+G P RTY+A + ++ ++ + + M K G +PT
Sbjct: 185 YGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPT 244
Query: 345 NDTYIMLIKK-FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY M++K F R + VW E+ G PD +SYT I+ +G+ EEA +Y
Sbjct: 245 IHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYI 304
Query: 404 MEMKEKQL-LPEPKTDELLQDWS 425
EM +K + P+ ++ D+S
Sbjct: 305 EEMIQKGMKTPQIDYNKFAADFS 327
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 37/210 (17%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-- 302
+ I + A +K+A+ + + M G V ++N L+ L + EA Q FD
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 303 --------------------------------EMLQRGISPTIRTYHAFLDIIRTGE--- 327
EML+ G+ P + ++ ++ + G+
Sbjct: 63 RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRP 122
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + E M+ G P TY MLI+ + + + + E+ + G PD ++YT L+
Sbjct: 123 EAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLL 182
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ EM +K P+ +T
Sbjct: 183 VGYGNAKRMDRVTALLEEMTQKGCPPDGRT 212
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 166/365 (45%), Gaps = 41/365 (11%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
+ L K+ G+ +TR Y ++ + + +K + A +++EM P VT + +
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV---V 307
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
YC + A+ F + K L C +V+
Sbjct: 308 NAYCREGRMSGAVRVFESMK-----------------------------LKGCEPNVW-- 336
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++N ++ G+CN+ G +A + +M + G+ DVV+++ +I ++ RL
Sbjct: 337 ---TYNAMVQGFCNV-GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M+ G+ D+ YN +I AL K V +A SL +E +G+ PN VT+N++I LCK
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
K D A ++M+ G +P TY F++ + + E ++ M + +P+
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y ++I + + R +G ++W ++ G PD +YT + A G+L EA MEMK
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572
Query: 408 EKQLL 412
+ ++
Sbjct: 573 KGGII 577
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 141 FQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ ALCR +++ A+ +L + + + +FN ++ G+C A+ ++ +M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRT-QQLDVAQDLFDKM 190
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RG D VS++ +I + + + + L LF +++ + D + A++ L R
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRG 246
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++ + +++ M+E G P Y +L+ C+ +K +EA + +EM G+ P T A
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306
Query: 320 LDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
++ + G + ESM+ GC+P TY +++ F + + +++ E G
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD +Y LI ++G +E A + M+ L + T +L D
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLID 413
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 148/366 (40%), Gaps = 28/366 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ M+ V K A AL+D+MR P +VT +LIR C + A
Sbjct: 338 YNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYN---LLIRGQCIDGHIESAFRLLR 394
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ A + L+ ALC+ V +A L + + P N+ +FN ++NG C
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP-NSVTFNTVINGLCK- 452
Query: 186 IGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + ++E M G D ++S I K + + L D+M + ++
Sbjct: 453 -GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTV 511
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y VI L K R A + M G +P+VVTY + ++ C +L EA EM
Sbjct: 512 NYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEM 571
Query: 305 LQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML---------- 351
+ GI Y+ +D I + +L+ M + P + T+ +L
Sbjct: 572 KKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLA 631
Query: 352 ----IKKFSRWR--QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+K S W+ + +VF+++ + +N +Y A++ +L+E
Sbjct: 632 EDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSH 691
Query: 406 MKEKQL 411
MKE L
Sbjct: 692 MKEDDL 697
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-KVYNAVIHALAKGRLVKDAISLMKS 268
+F +++ +S+ +LRLF M G YNA+I AL + ++ A +
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----- 323
M G P+ T+NSLI C+ ++LD A+ FD+M RG S +Y A ++
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 324 -----------------------------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R GEE +L+ M+++G +P Y L+
Sbjct: 215 VDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ R ++ K+ NE+ +NG P + TA+++A G++ A + + MK K E
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC--E 332
Query: 415 PKTDELLQDWSYN 427
P W+YN
Sbjct: 333 PNV------WTYN 339
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 185/444 (41%), Gaps = 57/444 (12%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVL----SWVRNDWEAAFTFFLWAGKQSGYAHSTREY 68
+K + +++ ECG++ ++V+ L + E+AF L + +G A Y
Sbjct: 352 YKAMALLDQMRECGVE--PDVVTYNLLIRGQCIDGHIESAFRL-LRLMEGNGLAADQYTY 408
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGR 121
+ +I L K K D A +L D + P+ VT T+ I C A + +
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV---INGLCKGGKFDVACTFLEK 465
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
++A A + ++ IE+ LC+ K ++ + KDV P +T ++ I++
Sbjct: 466 MVSAGCAPDTYTYSPFIEN-------LCKTKGSREGLSFIDEMLQKDVKP-STVNYTIVI 517
Query: 180 NGWCNIIGSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ + R A R+W +M G DVV+++ + Y LH+ + +MK+
Sbjct: 518 DR----LFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKK 573
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY-----------NSLI 285
GI D YN +I A++++K M PN T+ +
Sbjct: 574 GGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAED 633
Query: 286 KPL-----CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMR 337
PL K +L + + F+ M + + + R Y A L+ R +EV L+ M+
Sbjct: 634 VPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMK 693
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ D Y L+ F + R + + + + + +G P+ SY L+ G+ +
Sbjct: 694 EDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQAD 753
Query: 398 EAHQYYMEMKEKQLLPEPKTDELL 421
A + + ++ K E TDE++
Sbjct: 754 RAKEIFRGLRWK----EYNTDEIV 773
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + + ++ I+ +S+ R L +V L MK + + +Y ++++ K R+
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRM 716
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA +L+ SM G PN+++Y L+ + D A++ F + + + +
Sbjct: 717 YPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKI 776
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+D +IR G + ++ + +M C+P+++TY ML ++ S
Sbjct: 777 IIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELS 817
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 54/345 (15%)
Query: 123 INAFYAYKRFKFAVGI---EDFQGLLSALCRYKNV-----------QDAEHLMFCNK-DV 167
++AF RF+ AV + G+ A+ Y V +D L+ K D
Sbjct: 185 VSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDG 244
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + ++N +++ C +EA +V+ EM G D V+F+ ++ Y KAR +
Sbjct: 245 IPLDRYTYNTLIS-CCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEA 303
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ + +M+ G YN++I + K L+K+A L + ME KG+ P+V+TY +LI
Sbjct: 304 IGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISG 363
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------DIIRTG----- 326
L +A K+D A +DEML+ G P + TY+A + D +R+
Sbjct: 364 LDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPD 423
Query: 327 -----------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
EV G+ + M+K G P DTY+ LI +SR F +++
Sbjct: 424 VVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYK 483
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ E G PD S+Y A++ AL G+ E+A + + EM+ P+
Sbjct: 484 RMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPD 528
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 8/283 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+SA R +DA + M N + P ++N++L+ + I ++ +
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVAN-GIQP-AIVTYNVVLHVYSKIAVPWKDVVALVD 238
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M GI D +++ +ISC + + ++FD+M+ G E D+ +N+++ K R
Sbjct: 239 SMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKAR 298
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ +AI ++K ME G P+VVTYNSLI K L EA + +EM +GI P + TY
Sbjct: 299 MHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYT 358
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + R G + G + M + GC+P TY LIK +F + V++++
Sbjct: 359 TLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSA 418
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD ++ L+ NG E + EMK+ +PE T
Sbjct: 419 GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDT 461
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV-KDAISL 265
D +++ ++S +S+A + +F +M GI+ YN V+H +K + KD ++L
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI--- 322
+ SM+ G+ + TYN+LI + EA + FDEM G P T+++ LD+
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R +E G+L+ M GC P+ TY LI + + ++ E+ G PD +
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVIT 356
Query: 383 YTALIHALFLNGKLEEAHQYYMEM 406
YT LI L GK++ A Y EM
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEM 380
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 159/404 (39%), Gaps = 77/404 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I+ L + K D A DEM P+L T L+ L H V
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKL-------HGV-------- 401
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
R KF + F L SA F DV +NT NG
Sbjct: 402 ---RGKFPEMMAVFDDLRSA-------------GFV-PDVVTWNTLLAVFGQNGL----- 439
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E V+ EM + G + ++ +IS YS+ + + ++ +M GI D YN
Sbjct: 440 -DSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYN 498
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------ 295
AV+ ALA+G + A L ME P+ ++Y+SL+ A+KLD
Sbjct: 499 AVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAE 558
Query: 296 -----------------------EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
E +AF E+ +R S I +A + + R ++V
Sbjct: 559 KIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKV 618
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+L M+ + TY L+ +SR + EI +G PDR SY +I+A
Sbjct: 619 EEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYA 678
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
G+++EA + + EMK L+P+ T + ++ + N F E
Sbjct: 679 YGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEE 722
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G Y+ +++ L + +++ A L EM + P ++ +LL +
Sbjct: 487 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLL-------HAY 539
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALC----RYKNVQDAEHLMF------CNKDV 167
+ ++ A +A IE GL+ L + N+ + E C+ D+
Sbjct: 540 ANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDI 599
Query: 168 FPFNTKSFNIILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+LN ++ G +R + E + M I +++ ++ YS+ +
Sbjct: 600 N---------VLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDC 650
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + ++K G DR YN +I+A + +K+A L M+ G+ P++VTYN
Sbjct: 651 EKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIF 710
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+K +EA M+ RG P RTY++ L
Sbjct: 711 VKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSIL 746
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 114/246 (46%), Gaps = 7/246 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ +K D AL +++ + +TL+++ + V+++ AF
Sbjct: 532 YSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSK---VNNLSETEKAFL 588
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCNII 186
R + ++ I ++S + + V+ E ++ K +T ++N +++ + +
Sbjct: 589 ELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRL- 647
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + E + E+ G D S++ +I Y + + + RLF +MK G+ D Y
Sbjct: 648 GDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTY 707
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-- 304
N + + + ++AI L++ M +G PN TYNS+++ C+ K+ +A+ +
Sbjct: 708 NIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
Query: 305 LQRGIS 310
L GIS
Sbjct: 768 LHPGIS 773
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 52/420 (12%)
Query: 61 YAHSTREYHTMIAIL-GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
Y H R + I GK K D A L M PS+ LL I + D+
Sbjct: 2 YYHPRRRDCLFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM-KKFDL 60
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTK 173
++ + + I LL+ C K + DA L M D F T
Sbjct: 61 VISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 120
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ L+ + EA + M QRG ++V++ +++ K ++ L ++
Sbjct: 121 IHGLFLHN------KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 174
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ IE D ++N +I +L K R V DA++L K ME KG+ PNVVTY+SLI LC +
Sbjct: 175 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE------------------EVFG--- 331
+A Q +M+++ I+P + T++A +D ++ G+ ++F
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294
Query: 332 ----------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E M C P DTY LIK F + ++ + +++ E+S G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
D +YT LI LF +G + A + + +M + P+ T +L D N +E+ +
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 172/419 (41%), Gaps = 49/419 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y ++ L K D A+ L+++M + +V T+ I C
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 198
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A+N F + + + L+S LC Y DA L+ K + P N +F
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 257
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++ + G EAE++ +M +R I D+ +++ +I+ + L K ++F+ M
Sbjct: 258 NALIDAFVKE-GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D YN +I K + V+D L + M +G+ + VTY +LI+ L D
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-----EVFG----------------LL 333
A++ F +M+ G+ P I TY LD + G+ EVF ++
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 334 ESMRKMG----------------CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
E M K G +P TY +I R + + ++ E+G
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQFVE 432
PD +Y LI A +G + + EM+ + + + T +L D +K F++
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLD 555
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 163/356 (45%), Gaps = 39/356 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D M P+LVT +++ C
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRG 163
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A N + K + F ++ +LC+Y++V DA +L K + P N ++
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP-NVVTY 222
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ C+ G +A ++ +M ++ I ++V+F+ +I + K + +L D M
Sbjct: 223 SSLISCLCSY-GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 281
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D YN++I+ + A + + M K P++ TYN+LIK CK+++++
Sbjct: 282 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 341
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + F EM RG+ G+ V TY LI+
Sbjct: 342 DGTELFREMSHRGL---------------VGDTV-----------------TYTTLIQGL 369
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
N KV+ ++ +G PD +Y+ L+ L NGKLE+A + + M++ ++
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 26/427 (6%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A LVDI+R S K S + L++ +L+ R+ E A L + G
Sbjct: 285 AAQLVDIMR-LSKKASAF----------TYNPLITGLLA--RDFVEKAGALLLEM-ENEG 330
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ Y+T+I L K + A DEMR P L+T +L I YC ++
Sbjct: 331 IVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL---INGYCKAGNLK 387
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNII 178
+A+ F KR + + L+ CR +++ A L +D P + ++ I+
Sbjct: 388 QALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP-DVCTYTIL 446
Query: 179 LNGWCNIIGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+NG C + + R++ EM +G+ D +++ IS + +L ++M
Sbjct: 447 MNGSCMV--RNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLR 504
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D YN +I L K +KDA L M G+ + VTY LI C+ +L EA
Sbjct: 505 GISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEA 564
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ FD M+ G+SP++ TY F+ R G +G M + G +P TY +L+
Sbjct: 565 KNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHA 624
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + + ++ ++E+ E G P++ +YT LI G A + Y EM +K + P+
Sbjct: 625 LCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684
Query: 415 PKTDELL 421
T L
Sbjct: 685 HCTHNAL 691
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 165/378 (43%), Gaps = 17/378 (4%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSL 100
+D A ++ L Q G S Y+T++ K + D A AL+ +M G P+
Sbjct: 211 DDMRAVYSDML----QLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPND 266
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
VT ++ + R + + ++ R + L++ L V+ A L
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIM----RLSKKASAFTYNPLITGLLARDFVEKAGAL 322
Query: 161 MFC--NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ N+ + P ++N +++G G++ A+ + EM +G+ D+++++ +I+ Y
Sbjct: 323 LLEMENEGIVP-TVVTYNTLIDGLFKT-GNAEAAQVKFDEMRAKGLLPDLITYNSLINGY 380
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
KA NL + L LF +KR G+ YN +I + ++ A L + M E+ P+V
Sbjct: 381 CKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDV 440
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
TY L+ C R L R FDEML +G+ P Y+ + I F L E
Sbjct: 441 CTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREE 500
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M G TY +LI + + + +W ++ +G D +YT LIHA G+
Sbjct: 501 MMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGR 560
Query: 396 LEEAHQYYMEMKEKQLLP 413
L EA + M L P
Sbjct: 561 LIEAKNIFDGMVASGLSP 578
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 145/350 (41%), Gaps = 57/350 (16%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I K A L +++ GP+++T ILI YC + D+ A
Sbjct: 373 YNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYN---ILIDGYCRLGDLEGA----- 424
Query: 128 AYKRFKFAVGIED-------FQGLLSALCRYKNVQ------DAEHLMFCNKDVFPFNTK- 173
+R K + ED + L++ C +N+ D D F +NT+
Sbjct: 425 --RRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482
Query: 174 -----------------------------SFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
++N++++G C GS ++A +WM+M G+
Sbjct: 483 SAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKT-GSLKDAYVLWMKMVTDGL 541
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D V+++C+I + + L + +FD M G+ Y IH + + A
Sbjct: 542 RLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYG 601
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ M E+GV PN VTYN L+ LC+ + + A Q F EML+RG+ P TY +D
Sbjct: 602 WFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSC 661
Query: 324 RTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ G V L M + G P + T+ L K F + V + N +
Sbjct: 662 KEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYLENVV 711
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 39/276 (14%)
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
S + + EM++ G+ V +C++ A + ++ M ++G+E YN
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234
Query: 249 VIHALAKGRLVKDAISLMKSMEEK--GVAPNVVTYNSLIKPLCKARKLDEARQAFD---- 302
++ + K + A++L+K ME + G PN VTYN +I L + +L++A Q D
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294
Query: 303 ------------------------------EMLQRGISPTIRTYHAFLD-IIRTG--EEV 329
EM GI PT+ TY+ +D + +TG E
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ MR G P TY LI + + ++ ++ G GP +Y LI
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDG 414
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
G LE A + EM E+ LP+ T +L + S
Sbjct: 415 YCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGS 450
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 47/401 (11%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
H++I L K + D+A +L++ M P + T +LI C + A
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS---MLINELCKADKIQEAQEFLQG 109
Query: 129 YKRF--KFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWC 183
R A + LL++LC+ K V A + M + V P + S++I+++G+C
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVP-DVVSYSILIDGFC 168
Query: 184 NII----------------------------------GSSREAERVWMEMSQRGICYDVV 209
I G +A+ V+ EM G DV+
Sbjct: 169 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
++S +I +S AR + LF+ M G + YN ++H L K +A L + M
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE- 327
E+G P+ VTY +L+ C K+++A + FDEM+ +G P + Y+ L R G+
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTA 385
E L + M C+P ++ ++I S+ ++ + +V+ + ++ G PD +Y +
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
LI L +L EA + + E+ +L P+P +L + Y
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 20/347 (5%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG-PSLVTKQTLLILIRRYCAVH 117
S A S Y++++ L K +K A+A+ M + P +V+ ILI +C +
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYS---ILIDGFCKID 171
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFN 171
++GRA + + + L+ L R + DA+ + C+ DV ++
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T +++G+ ++ +A ++ M RG + V+++C++ K + LF
Sbjct: 232 T-----LIHGF-SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M G + D+ Y +++ ++ A+ + M KG P+VV YN L+K +A
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDT 347
K EARQ F M+ R P +++ +D + + + +E +M GC P T
Sbjct: 346 GKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 405
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
Y LI ++ KV+ EI PD ++ L+ A++ G
Sbjct: 406 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV---TYNSLIKPLCKARKLDEARQAFD 302
+ A + L K ++ A ++M+E + T +S+I+ LCKA ++D A +
Sbjct: 14 WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLE 73
Query: 303 EMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLE---SMRKMGCQPTNDTYIMLIK 353
M++RG P + T+ + D I+ +E + S R C +Y L+
Sbjct: 74 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF----SYNSLLN 129
Query: 354 KFSRWRQFGNVFKVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++ F +++ +SE PD SY+ LI +L A + Y +M + +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 413 PEPKT 417
P T
Sbjct: 190 PNVTT 194
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 145/281 (51%), Gaps = 11/281 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEM 199
L++ LCR +V A +M +F + +FN ++NG CN G +EA ++ EM
Sbjct: 137 LINCLCRLSHVDFAVSVM---GKMFKLGIQPDAITFNTLINGLCNE-GKIKEAVGLFNEM 192
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
G +V+S++ +I+ K N +R+F +M++ + + YN +I +L K RLV
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+A+ + M ++G+ P+VVTYN+++ C +L+EA + F EM+ R + P T++
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 320 LD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+D + + G E + E+M + G +P TY L+ + Q KV + G
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ SSY LI+ + ++ EA + EM EK L P+ T
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 16/368 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ + + K +++ +A +L ++M ++ + L +LI C + V A+
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS---LNVLINCLCRLSHVDFAV 151
Query: 124 NAFYAYKRFKFAVGIE--DFQGLLSALCRYKNVQDAEHLMFCNKDVFPF---NTKSFNII 178
+ K FK + + F L++ LC +++A L N+ V+ N S+N +
Sbjct: 152 SVMG--KMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF--NEMVWSGHEPNVISYNTV 207
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+NG C G++ A RV+ +M Q +VV+++ II K R +++ + +M G
Sbjct: 208 INGLCKN-GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I D YN ++H + +A L K M + V P+ VT+N L+ LCK + EAR
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ M ++G P TY+A +D + +E +L M GC P +Y +LI +
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ ++ ++ +E+SE PD +Y+ L+ L G+ EA + EM LLP+
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 416 KTDELLQD 423
+L D
Sbjct: 447 MAYSILLD 454
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 170/364 (46%), Gaps = 16/364 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+I L K A L +EM P++++ T+ I C + A+ F
Sbjct: 169 FNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTV---INGLCKNGNTIMAVRVFR 225
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
++ + + + ++ +LC+ + V +A E L P + ++N IL+G+C++
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL- 284
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA R++ EM R + D V+F+ ++ K + + + + M G E + Y
Sbjct: 285 GQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTY 344
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
NA++ + +AI ++ M KG APN+ +YN LI CK+++++EA++ EM +
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ ++P TY + + + G E L + M G P Y +L+ F +
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 464
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K+ E+ E P+ YT LI +F+ GKLE A + + ++ + P+
Sbjct: 465 ALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI-------- 516
Query: 424 WSYN 427
W+YN
Sbjct: 517 WTYN 520
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 18/375 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R + A + EM P +VT T+L +C++ + A F
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL---HGFCSLGQLNEATRLFK 295
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
F L+ LC+ V +A + K P N ++N +++G+C +
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP-NAYTYNALMDGYC-L 353
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +V M +G ++ S++ +I+ Y K++ +++ RL +M + D
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ ++ L + ++A++L K M G+ P+++ Y+ L+ CK LDEA + EM
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRW 358
+R I P I Y I+ G + G LE +++ G +P TY ++IK +
Sbjct: 474 ERRIKPNIILY----TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
++ + ++ ++G PD SY +I N A Q EM K+ + T
Sbjct: 530 GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
Query: 419 ELLQDWSYNKQFVER 433
++L D + + + R
Sbjct: 590 QMLLDLESHDEIISR 604
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
++ L F +M RM + + ++AK + A+SL M+ GV NV + N
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM 339
LI LC+ +D A +M + GI P T++ ++ + G +E GL M
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P +Y +I + +V+ ++ +N P+ +Y +I +L + + EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 400 HQYYMEMKEKQLLPEPKT 417
++ EM ++ + P+ T
Sbjct: 256 VEFLSEMVDRGIPPDVVT 273
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 15/356 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +M+ +L K F A L+DEMR ++ Q +L LIRRY A + F
Sbjct: 137 YASMMDLLAKHHHFPLARHLLDEMRKRSIP---ISSQVILALIRRYVRAGMSSEASDLFR 193
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + ++ G+ D LL AL + + +A+ L K VF + + +++ WC
Sbjct: 194 SME--EYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCR 251
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE+V+ EM Q GI +V +++ +I +A + + L QM G +
Sbjct: 252 S-GCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTA 310
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA--RKLDEARQAFD 302
+NA++ A K + + + M + G P+++TYN L++ C LD A +
Sbjct: 311 TFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLL 370
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M+ +G +P T++ L ++ V L E M+++ C+P TY +L+K F + +
Sbjct: 371 KMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDK 430
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE-KQLLPE 414
V ++ ++ G P+ ++Y ALI G + A+ EM E K L P+
Sbjct: 431 SMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPK 486
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 9/290 (3%)
Query: 139 EDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
E + ++ L ++ + A HL+ K P +++ ++ + G S EA ++
Sbjct: 135 ELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRA-GMSSEASDLFR 193
Query: 198 EMSQRGI-CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M + G D + ++ SK R + LFD K + D +Y ++HA +
Sbjct: 194 SMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSV-FTPDVVLYTTLVHAWCRS 252
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ A + M++ G+ PNV TY ++I + +A ++ A++ +M+ G P T+
Sbjct: 253 GCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATF 312
Query: 317 HAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ--FGNVFKVWNEI 371
+A + ++ G E+V + MR++GC P TY L++ Q K+ ++
Sbjct: 313 NAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKM 372
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G PD ++ ++ + + G ++ AH+ Y M+E Q P T LL
Sbjct: 373 IAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLL 422
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
Y S++ L K AR DEM +R I + + A + +R G E L SM
Sbjct: 137 YASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSME 196
Query: 338 KMGCQ-PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ G P L+ S+ R +++ ++ PD YT L+HA +G L
Sbjct: 197 EYGGGVPDPAVLASLLGALSKKRLASEAQALFDSY-KSVFTPDVVLYTTLVHAWCRSGCL 255
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
++A Q + EM++ ++P T + D Y V R
Sbjct: 256 DKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPR 292
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 210/492 (42%), Gaps = 51/492 (10%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+EM ++E K++ LV +V+ + D A FF WAG+Q GY+H+ Y MI L
Sbjct: 134 AEMGKQLERLKFKLNPGLVCDVVVN-QKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRL 192
Query: 76 GKVRKFDTAWALIDEM-RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
++ D ++ M + G ++ L L+R + + ++V A+ F K F
Sbjct: 193 AGAQETDAVVQILTAMWKEGHR----ISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGC 248
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREA 192
+ +L L + A ++F F + ++F I ++ + N G A
Sbjct: 249 NPSTNMYNFVLELLVKGGFYHSAV-IVFGKLGQFRIQPDAQTFRIFVHSF-NRSGRLDPA 306
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
EM + GI V +F+ +I K+ N+ + + F+ MK + + Y +++
Sbjct: 307 AEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNG 366
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
LAK +++A + M+E +P+ + YN+LI L KA + D A F EM RG+ P
Sbjct: 367 LAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPN 426
Query: 313 IRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+RTY+ + ++ + G E + L +++ G P TY LI + Q V +
Sbjct: 427 LRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK 486
Query: 370 EISENGN-----------------GPDRS--------------SYTALIHALFLNGKLEE 398
E+ E G G DR+ +Y L+ A NG ++E
Sbjct: 487 EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDE 546
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISK---- 454
A + MK+ + +P T L D ++ ++ L+ + Q + + V
Sbjct: 547 AVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMA 606
Query: 455 ---KSDQDREFL 463
K DQ+ E L
Sbjct: 607 SFYKRDQEEESL 618
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 181/389 (46%), Gaps = 43/389 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-------------------- 107
Y T++ LGK + D A +L+ EM PS+VT +L+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
++I C DV +A++ F K + +++ LLS+L + + +
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSF 211
A + + P +T +NI++NG ++ S+R EA ++ M + I D+ ++
Sbjct: 686 FALQIFNELQESSLVP-DTFVYNIMVNG---LVKSNRVDEACKLVDSMKNQNILPDLFTY 741
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ ++ K+ L + +F +M G E D Y +++ L KG + A+ + ++M +
Sbjct: 742 TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EE 328
K P+VVTY+SLI L K +++EA F+ + +G +P + Y + +D + G +
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L E M++ C P TY L+ ++ + K+ E+ + G PD +Y LI
Sbjct: 862 ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ G ++EA Y+ MKEK ++P+ T
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVIT 950
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 24/377 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYC 114
K+ G Y+T+I +LGK + D A+I EM +GGE I+ R
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGEC-----------IISRDSN 502
Query: 115 AVHDV---GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFP 169
A H+ G Y FK ++G + L+SA +V +A L+ K + P
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFK-SLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIP 561
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++ +++G G EA + EM ++G VV++S +++ + K + L
Sbjct: 562 -TVVTYTTLVDGLGKA-GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLS 619
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD+M R G D Y+ VI+ L K V A+ + M+E+G+ P + Y +L+ L
Sbjct: 620 LFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV 679
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K K+D A Q F+E+ + + P Y+ ++ ++++ +E L++SM+ P
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY L+ + + F ++ +++E G+ PD +YT+L+ L GKL A + M
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799
Query: 407 KEKQLLPEPKTDELLQD 423
+K+ +P+ T L D
Sbjct: 800 AKKRCVPDVVTYSSLID 816
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 161/343 (46%), Gaps = 40/343 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR---- 112
++S T Y+ M+ L K + D A L+D M+ P L T +LL + +
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754
Query: 113 ---------------------YCAVHDV-------GRAINAFYAYKRFKFAVGIEDFQGL 144
Y ++ DV A+ F A + + + + L
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814
Query: 145 LSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ +L + V++A + +K P N ++ +++ + G A ++ EM +R
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTP-NVGVYSSLIDSFGKK-GMVDRALELFEEMQRR 872
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
++V+++ ++S +KA L+ +L ++M+++G D YN +I + K +V +A
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEA 932
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
S K M+EKG+ P+V+T+ SLI+ L K KL EA + FD M + G +P++ TY+ +DI
Sbjct: 933 ESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDI 992
Query: 323 I-RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFS-RWRQF 361
+ R G+ E + M+ GC P T ++ + S R +QF
Sbjct: 993 LGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQF 1035
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 14/294 (4%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E AF F + G+ Y +++ +LGK K A + M P +VT +
Sbjct: 755 EEAFNMFTKM-TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY---KNVQDAEHLMF 162
L+ + + GR A+Y ++ + G G+ S+L K + D +F
Sbjct: 814 LIDSLGKE------GRVEEAYYFFEN-SISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866
Query: 163 --CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ P N ++N +L+G G AE++ EM + G D+V+++ +I K
Sbjct: 867 EEMQRRQCPPNIVTYNNLLSGLAKA-GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ + F +MK GI D + ++I +L K + +A L SMEE+G P+VVT
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
YN LI L +A K+ EA F EM +G P T I+ E+ F LE
Sbjct: 986 YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 14/347 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T++ L K +K A AL++++ P++ T LL C + + AI+
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALL---NGLCKMGRLEEAIDLLR 93
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWC 183
+ + L+ L + K +A L K++ +T + ++ G
Sbjct: 94 KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF---KEMASRGLALDTVCYTALIRGLL 150
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +A V+ M+ +G DVV+ S +I KA + +R+F M+ G+ +
Sbjct: 151 QA-GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 209
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
VY+A+IH L K R + A+ ++ M++ P+ +TYN LI LCK+ + AR FDE
Sbjct: 210 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDE 269
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
ML+ G P + TY+ + + G + G+ + M C P TY LI + RQ
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ + E G PD Y++L+ L +GKLE + EM+
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME 376
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 21/289 (7%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR- 190
I + LL+ LC+ +++A L+ C DV + + +++G +G +
Sbjct: 69 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS-----LIDG----LGKKKR 119
Query: 191 --EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EA +++ EM+ RG+ D V ++ +I +A + + ++ M G D +
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L K + A+ + KSME +G+APN V Y++LI LCKARK+D A + +M +
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 309 ISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+P TY+ +D + ++G+ + M + GC+P TY +LI F +
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V++++S + P+ +Y LI L +L +A YY MKE+ P+
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 7/287 (2%)
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ I + ++ L + K +Q+A LM P ++N +LNG C + G EA
Sbjct: 32 IDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTP-TIATYNALLNGLCKM-GRLEEAI 89
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+ ++ G DVV+++ +I K + + +LF +M G+ D Y A+I L
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ + A S+ K+M +G P+VVT +++I LCKA ++ A + F M RG++P
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 209
Query: 314 RTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
Y A + + R + +L M+K C P TY +LI + ++E
Sbjct: 210 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDE 269
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ E G PD +Y LI G + A + +M + P T
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVT 316
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F+I++NG G +A + E + G D+ +++ I+ +K + + + + L ++
Sbjct: 1 TFSILINGLVKA-GMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEK 59
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G YNA+++ L K +++AI L++ + + G P+VVTY SLI L K ++
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
EA + F EM RG++ Y A + +++ G+ + + ++M GC P T
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + + G +++ + G P+ Y+ALIH L K++ A + +MK+
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 411 LLPEPKTDELLQD 423
P+ T +L D
Sbjct: 240 CTPDTITYNILID 252
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 141/353 (39%), Gaps = 49/353 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A T Y +I L + K A ++ M P +VT T+ I C +
Sbjct: 134 GLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM---IDGLCKAGRI 190
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
G A+ F + + A + L+ LC+ + + A ++ FC D T
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD-----TI 245
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI+++G C G A + EM + G DV +++ +IS + KA N +FD
Sbjct: 246 TYNILIDGLCKS-GDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + Y +I L K R + A + M+E+G P+ Y+SL+ LCK+ K
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
L+ FDEM + G++ + T LI
Sbjct: 365 LEGGCMLFDEMERSGVA---------------------------------NSQTRTRLIF 391
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+ + ++N I + G P +Y ++I AL +GK+ E Y EM
Sbjct: 392 HLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 10/365 (2%)
Query: 64 STREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
+ R Y +I A+ G RK + A L +EM+ P++ T +LI C + + A
Sbjct: 298 TVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNV---HTYTVLIDGLCKENKMDEA 353
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNG 181
+ + L+ C+ + DA E L + NT+++N ++ G
Sbjct: 354 RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C +A + +M +R + +++++ +I K +L RL M G+
Sbjct: 414 LCKK-RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D+ Y+ I L K V++A +L S++ KGV N V Y +LI CK K+D A
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532
Query: 302 DEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ ML P TY+ ++ + + +E L+ M MG +PT TY +LI + +
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
F + KV+N + G PD +YTA +HA F G LEE +M E+ +LP+ T
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Query: 419 ELLQD 423
+L D
Sbjct: 653 TVLID 657
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 70/430 (16%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA------------------- 84
D + A +FF W + G+ H+ Y +M+ IL + R A
Sbjct: 80 DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139
Query: 85 --------------------------------WALIDEMR-------GGETGPSLVTKQT 105
+ LIDEM+ + P++ T
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ--GLLSALCRYKNVQDA-EHLMF 162
+ + YC + +V A YA K + + + F L+ CR K V +A E +
Sbjct: 200 M---VNGYCKIGNVVEA--ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ N S+ +++G C G EA +++ +M++ C V +++ +I S +
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEA-GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L LF++MK G E + Y +I L K + +A ++ M EKG+ P+VVTYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKM 339
+LI CK +D+A + D M P RTY+ + + R + LL M +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P+ TY LI + + +++ + ++ENG PD+ +Y+ I L G++EEA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 400 HQYYMEMKEK 409
+ +K K
Sbjct: 494 GTLFDSVKAK 503
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 146/346 (42%), Gaps = 8/346 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G S Y+ +I K D A+ ++D M GP+ T L I C
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL---ICGLCKKR 418
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
V +A+ K + + + L+ C+ +++ A L+ N++ + +++
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ ++ C G EA ++ + +G+ + V ++ +I Y K + L ++M
Sbjct: 479 VFIDTLCKE-GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ YN +I L K + +K+A SL+ M GV P VVTY LI + K D
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + F+ M+ G P + TY AFL + EEV ++ M + G P TY +LI
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
++R F + + G P + LI L +++E
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 166/431 (38%), Gaps = 82/431 (19%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV---- 119
+TR Y+ +I L K RK A AL+++M + PSL+T +L I C V+D+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL---IHGQCKVNDLESAY 459
Query: 120 ----------------------------GRAINAFYAYKRFKFAVGIED----FQGLLSA 147
GR A + K A G++ + L+
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK-AKGVKANEVIYTALIDG 518
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
C+ + A L+ N P N+ ++N+++ G C +EA + +M G+
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKE-KKMKEASSLVAKMLTMGVK 576
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
VV+++ +I K L++F+ M +G + D Y A +HA ++++ +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD---EMLQRGISPTIRTYHAFL-- 320
+ M E+G+ P++VTY LI +L +AFD M+ G P++ +
Sbjct: 637 IAKMNEEGILPDLVTYTVLID---GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693
Query: 321 ----------------------------DIIRTGEE--VFGLLESMRKMGCQPTNDTYIM 350
D+ +T E L E M + GC Y
Sbjct: 694 LSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGA 753
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + + + + + E G P Y +L+ G EA + M E
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813
Query: 411 LLPEPKTDELL 421
LLP ++ +LL
Sbjct: 814 LLPLLESYKLL 824
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 77/437 (17%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND E+A+ L ++G Y I L K + + A L D ++ + V
Sbjct: 453 NDLESAYRL-LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEH 159
L I YC VG+ A+ +R + + + L+ LC+ K +++A
Sbjct: 512 YTAL---IDGYC---KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 160 LM---------------------FCNKDVFPFNTKSFNIILN-GW----CNII------- 186
L+ F K FN +++ G+ C
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625
Query: 187 --GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G E + V +M++ GI D+V+++ +I Y++ H+ M G +
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685
Query: 245 VYNAVIHALAKGRLVKD-----------------------------AISLMKSMEEKGVA 275
+ + +I L+ +K+ A+ L + M E G
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCT 745
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGL 332
+V Y +LI C+ +L+EA+ M +RG+SP+ Y++ LD + E L
Sbjct: 746 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 805
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+++M + G P ++Y +L+ V++ + G D ++ LI L
Sbjct: 806 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 865
Query: 393 NGKLEEAHQYYMEMKEK 409
++E + M+EK
Sbjct: 866 RDLVDECSELIDIMEEK 882
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 185/417 (44%), Gaps = 10/417 (2%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
H+ + N++ E G+ S+ S +++ + + D +A + +G + + + T
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMAR-NGVSGNVYTFTT 480
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I+ K D A L D+M P+ VT ++I YC V +V +A +
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFN---VMIEGYCRVGNVRKAFQLYDQMV 537
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
++ L+S LC A E + + N+ S ++ G+C G
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKE-GRL 596
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
E +W EM RG+ D++SF+ I+ K + K+ LF +MK G++ D + +
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I +K + A++ M G +PNVVTY LI LCK+ L A+ +EML
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716
Query: 310 SPTIRTYHAFLDIIRT-GE-EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY+ FLD + GE E +L + GC T+ LIK F + Q +
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDL 776
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+E+G PD SY+ +I+ L G + +A Q + EM K L P+ +L W
Sbjct: 777 MQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRW 833
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 158/372 (42%), Gaps = 12/372 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K D A + D MR E G VT LI YC + +A
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMR--EKGIR-VTVYPYNSLINGYCQHDNFHQARGLLN 429
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
A + L++ LCR ++ A L ++ N +F +++G+C
Sbjct: 430 EMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD- 488
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G+ EA R++ +M + + V+F+ +I Y + N+ K +L+DQM G+ D Y
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I L A + +E V N + +L+ CK +L E +DEM
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608
Query: 307 RG-----ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
RG IS T+ Y A + GE++ L M++ G +P N + +I S+
Sbjct: 609 RGVKLDLISFTVIVYAAL--KLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
W+++ +G P+ +YT LI+ L +G L A EM + LP T
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726
Query: 422 QDWSYNKQFVER 433
D+ N+ +E+
Sbjct: 727 LDFLANEGELEK 738
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 18/369 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG A ++ L K+R+F A L DEM + + + IR YC +
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP---LDEYVYTAGIRAYCEIR 209
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
++ A + + L+ LCR V +A + + + + ++
Sbjct: 210 NLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVA-DEVTY 268
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICY----DVVSFSCIISCYSKARNLHKVLRLF 231
++ G+C E + +EM+ + V S S ++ K ++ K RL
Sbjct: 269 RTLVYGFCRT-----EELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ +G+ + NA+I L K R ++A L + M +G+ PN VTY LI LCK
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKR 383
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
+D+A FD M ++GI T+ Y++ ++ + + GLL M + G P+ +Y
Sbjct: 384 GMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASY 443
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI R + ++ E++ NG + ++T LI +G ++EA + + +M +
Sbjct: 444 SPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMID 503
Query: 409 KQLLPEPKT 417
++P T
Sbjct: 504 SSVVPNEVT 512
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 3/234 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +A R+ + + G+ ++ + + +I K R + RLF M G+E + Y
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+IH+L K ++ DA+ + M EKG+ V YNSLI C+ +AR +EM++
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433
Query: 307 RGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G++P+ +Y + + R G+ L M + G T+ LI F +
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++++ ++ P+ ++ +I G + +A Q Y +M ++ L P+ T
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 3/236 (1%)
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+R+A V GI + S I+ K R LFD+M + D VY A
Sbjct: 141 ARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTA 200
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
I A + R + A L+ ME KGV + V YN L+ LC+ ++ EA + + M++RG
Sbjct: 201 GIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERG 260
Query: 309 ISPTIRTYHAFL-DIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
I TY + RT E L + M + P+ + ++ + F
Sbjct: 261 IVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAF 320
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ + E G P+ + ALI L + + EA + + M + L P T +L
Sbjct: 321 RLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 9/229 (3%)
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
R +DA +++ G+A T + ++ L K R+ AR FDEM+Q Y
Sbjct: 139 RRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVY 198
Query: 317 HAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
A + IR + GLL M G + + Y +L+ R + +V N + E
Sbjct: 199 TAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVE 258
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
G D +Y L++ +LE A + +M +P + + D + +++
Sbjct: 259 RGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDK 318
Query: 434 QIASLKAHQPQSGQNTRVIS-----KKSDQDREFLQQPETRRVVRHQGF 477
L H + G + + K +DR F + R + ++G
Sbjct: 319 AF-RLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGL 366
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 18/211 (8%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+ RE K + N C I V S+ E + N W+ G + +
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSK--EENIVQALNCWDKMIA--------DGCSPNVV 686
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y +I L K +A L +EM G P+ T L + A
Sbjct: 687 TYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL----DFLANEGELEKAKVL 742
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCN 184
+A F L+ C+ +Q A LM N + FP + S++ I+N C
Sbjct: 743 HATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFP-DCISYSTIINELCK 801
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ G +A ++W EM +G+ D+V+++ +I
Sbjct: 802 V-GDINKAFQLWNEMLYKGLKPDIVAYNILI 831
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 125/238 (52%), Gaps = 3/238 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +EA+ V+ M ++G +VV++S ++ Y + ++K +F+ M + G+ D + Y
Sbjct: 233 GKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSY 292
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ K ++ A++L + M + + PNVVTYNSLI LCK+ K+ A + DEM
Sbjct: 293 NILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHD 352
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
RG P I TY + LD + G++ LL ++ G QP TY +LI + + +
Sbjct: 353 RGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 412
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ ++ G + ++YT +IH NG EA +M+E +P T E++
Sbjct: 413 AQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEII 470
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 141/272 (51%), Gaps = 5/272 (1%)
Query: 145 LSALCRYKNVQDAEHLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+S C+ V++A+++ K F N +++ +++G+C ++ +A+ ++ M+Q G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYC-LVKEVNKAKSIFNNMAQGG 284
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ D+ S++ +I+ + K + + LF++M I + YN++I L K + A+
Sbjct: 285 VNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYAL 344
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L+ M ++G P+++TY+SL+ LCK D+A ++ +G+ P + TY ++ +
Sbjct: 345 KLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGL 404
Query: 324 RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
G E+ + E + G +TY ++I F FG + +++ ENG P+
Sbjct: 405 CKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNA 464
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+Y +I +LF + ++A + +EM + LL
Sbjct: 465 VTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 9/256 (3%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
++ + +C V A N F A + F + + L+ C K V A+ +
Sbjct: 222 MMAPVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMA 281
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
V P + +S+NI++NG+C I + A ++ EM R I +VV+++ +I K+
Sbjct: 282 QGGVNP-DIQSYNILINGFCK-IKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 339
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ L+L D+M G D Y++++ AL K AI+L+ ++++G+ PN+ TY
Sbjct: 340 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 399
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKM 339
LI LCK + ++A+ F+++L +G + + TY H F + G E +L M +
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFG-EALAMLSKMEEN 458
Query: 340 GCQPTNDTYIMLIKKF 355
GC P TY ++I+
Sbjct: 459 GCIPNAVTYEIIIRSL 474
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
A + K VK+A ++ +M +KG PNVVTY+SL+ C +++++A+ F+ M Q
Sbjct: 224 APVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQG 283
Query: 308 GISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G++P I++Y+ ++ I+ + L E M P TY LI + +
Sbjct: 284 GVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYA 343
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+ +E+ + G PD +Y++L+ AL N ++A ++K++ L P T +L
Sbjct: 344 LKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTIL 400
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 42/254 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+ +I K++ D A L +EM + P++VT + LI C
Sbjct: 282 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNS---LIDGLCKSG 338
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSF 175
+ A+ I + LL ALC+ A L+ KD + P N ++
Sbjct: 339 KISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQP-NMYTY 397
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++NG C G +A+ ++ ++ +G Y++
Sbjct: 398 TILINGLCK-GGRPEDAQNIFEDLLVKG--YNI--------------------------- 427
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ Y +IH + +A++++ MEE G PN VTY +I+ L + D
Sbjct: 428 ------NVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDEND 481
Query: 296 EARQAFDEMLQRGI 309
+A + EM+ RG+
Sbjct: 482 KAEKLLLEMITRGL 495
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 174/386 (45%), Gaps = 17/386 (4%)
Query: 46 EAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
+ A FL+AGK G+ H+ YH+++ L + R FD +L+ ++R + P + +
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN--SYPPIKCGE 120
Query: 105 TLLI-LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
L I L+R Y ++ F F + LL+ L + + D H MF
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF-DLVHAMFK 179
Query: 164 N-KDVFPFNTKSF--NIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
N K+ F F N+++ C N I S A +V E+ G+ ++V+++ I+ Y
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIES---AYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
++ R+ ++M G D Y ++ K +A ++M ME+ + PN
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLES 335
VTY +I+ LCK +K EAR FDEML+R P +D + +E GL
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M K C P N LI + + K+++E E G+ P +Y LI + G+
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGE 415
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELL 421
L EA + + +M E++ P T +L
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVL 441
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 158/371 (42%), Gaps = 46/371 (12%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG-ETGPSLVTK 103
+E++ FL G S R +T++ +L + ++FD A+ + P++ T
Sbjct: 136 YESSMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTC 194
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-- 161
+L++ C +D+ A + + +L +++ A+ ++
Sbjct: 195 N---LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
++ +P + ++ ++++G+C + G EA V +M + I + V++ +I K
Sbjct: 252 MLDRGWYP-DATTYTVLMDGYCKL-GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME----------- 270
+ + +FD+M D + VI AL + V +A L + M
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 271 -----------------------EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
EKG P+++TYN+LI +C+ +L EA + +D+M +R
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 308 GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
P TY+ ++ + + G +E +LE M ++GC P T+++L + + + +
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 365 FKVWNEISENG 375
K+ + NG
Sbjct: 490 MKIVSMAVMNG 500
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 6/297 (2%)
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN--IIGSSRE 191
F + + +L L R + E LM ++ +P N+ ++ N + G
Sbjct: 79 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 138
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR-MGIECDRKVYNAVI 250
+ R+++ + G+ V S + +++ + + V +F K GI + N ++
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 198
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL K ++ A ++ + G+ PN+VTY +++ ++ A++ +EML RG
Sbjct: 199 KALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY 258
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY +D + G E +++ M K +P TY ++I+ + ++ G +
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
++E+ E PD S +I AL + K++EA + +M + +P+ L W
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM--GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
++S ++ +N+ L++F + G + Y++++ L++ R SLM +
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL-- 109
Query: 272 KGVAPNVVTYNSLIKPLCK----ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
+ P + +L L + A + + + + F + G+ ++R+ + L+++ +
Sbjct: 110 RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 328 EVFGLLESMRK-----MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
F L+ +M K G P T +L+K + + +KV +EI G P+ +
Sbjct: 170 R-FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
YT ++ G +E A + EM ++ P+ T +L D
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 168/363 (46%), Gaps = 14/363 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K + D A +++EM+ P + T ILI +C DV + +
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYS---ILIHGFCKQGDVEKGLYLIE 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWC 183
K + + L LC+ K + D +F +D+ + ++ +++I++ G+C
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCK-KRLSDISLDIF--RDLGAAGYKYDQTAYSILIKGFC 441
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G A ++ EM + + D +F ++ + K L F+ M GI
Sbjct: 442 -MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSI 500
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
N +I A + V++A++LM M+ +G+ PN+ TYN++I LCK RK + A + F
Sbjct: 501 ATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPL 560
Query: 304 MLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
ML+R + P++ Y +D ++ L M K+G P Y +LI +
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ ++ +++ENG PD+ SYT++I G + +A + EM ++ LP T
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680
Query: 421 LQD 423
L D
Sbjct: 681 LVD 683
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 10/333 (3%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+GY + Y +I D+A L++EM P ++L + +C +
Sbjct: 424 AGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL---VHGFCKMGL 480
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A+ F I ++ A CR V++A +LM + +FP N ++N
Sbjct: 481 WVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP-NLFTYN 539
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++N C S R E ++ M +R + VV +S +I ++K N K L L+ +M +
Sbjct: 540 AVINRLCKERKSERALE-LFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK 598
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+G+ D Y +I+ L + +A +L K M E G+ P+ ++Y S+I C+ + +
Sbjct: 599 IGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRK 658
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A F+EMLQRG PT+ TY + +D + + L++ M++ G P TY +LI
Sbjct: 659 AWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIA 718
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
R ++ NE+ ENG PD +Y L
Sbjct: 719 AHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 178/401 (44%), Gaps = 35/401 (8%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--ILIRRYC 114
K G + Y +I K + LI+EM+ PSLV+ +L + +R
Sbjct: 352 KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLS 411
Query: 115 AVH-DVGRAINAF-YAYKRFKFAVGIEDF--QG-------LLSALCRYKNVQDA---EHL 160
+ D+ R + A Y Y + +++ I+ F QG L+ + R D E L
Sbjct: 412 DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471
Query: 161 M--FCNKDVFPFNTKSFNIILNGW-------CNII-------GSSREAERVWMEMSQRGI 204
+ FC ++ + FN++L G CN+I G EA + EM +GI
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
++ +++ +I+ K R + L LF M + + VY+ +I AK + A+
Sbjct: 532 FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALM 591
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
L M + GV P++V Y LI LC ++ EA F +M + G++P +Y + +
Sbjct: 592 LYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFC 651
Query: 324 RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R G+ + + L M + G PT TY L+ + + + + +E+ G PD
Sbjct: 652 RIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVV 711
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+Y LI A G L++A + EMKE +LP+ T +L+
Sbjct: 712 TYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLE 752
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 168/381 (44%), Gaps = 21/381 (5%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A FL A K++G STR + ++ L + + + +L +EM+ P++ T
Sbjct: 196 ENAVDVFLQA-KKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYT- 253
Query: 106 LLILIRRYC------AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-- 157
I++ YC A D +A +R + + + + LCR V+ A
Sbjct: 254 --IMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALD 311
Query: 158 --EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ N V N +N I++G C G EA +V EM GI DV ++S +I
Sbjct: 312 FVRSLISANGLV---NVYCYNAIIHGLCK-KGELDEALKVLEEMKSCGISPDVYTYSILI 367
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ K ++ K L L ++MK +E Y+++ H L K RL ++ + + + G
Sbjct: 368 HGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYK 427
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGL-- 332
+ Y+ LIK C LD A + +EM++ ++P + + + + G V L
Sbjct: 428 YDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEF 487
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
M + G P+ T ++I R + + NE+ G P+ +Y A+I+ L
Sbjct: 488 FNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCK 547
Query: 393 NGKLEEAHQYYMEMKEKQLLP 413
K E A + + M ++ +LP
Sbjct: 548 ERKSERALELFPLMLKRNVLP 568
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 166/389 (42%), Gaps = 30/389 (7%)
Query: 44 DWEAAFTF-FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
+WE A F K+ G++ S + T++ +L +AL+ ++ +L
Sbjct: 102 NWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDA 161
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
+ IL+ + D R++ F + + +A +N D +
Sbjct: 162 FELFPILLE---SPKDAARSVIVF------------DLLIKVFAANSMLENAVDV--FLQ 204
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAER-VWMEMSQRGICYDVVSFSCIISCYSKA 221
K +T+S N +L C + RE R ++ EM G +V +++ +++ Y K
Sbjct: 205 AKKTGLELSTRSCNFLLK--CLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKG 262
Query: 222 R------NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + + ++M+R G Y+ I+ L + V+ A+ ++S+
Sbjct: 263 NFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGL 332
NV YN++I LCK +LDEA + +EM GISP + TY + + G E+ L
Sbjct: 323 VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL 382
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+E M+ +P+ +Y L + R ++ ++ G D+++Y+ LI +
Sbjct: 383 IEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCM 442
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G L+ AH+ EM L P+P E L
Sbjct: 443 QGDLDSAHKLMEEMVRNNLAPDPSNFESL 471
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 178/408 (43%), Gaps = 14/408 (3%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K +FDT W + +M P++VT TL I C D +A F K
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTL---IDGCCRQGDFLKAFRLFDEMIEKKI 224
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ + L+ LC + +AE + N + P N ++N +++G+C I ++A
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKI-AHVKKA 282
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
++ EM G+ +VV+F +I K + + M G+ + VYN +I
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
K + +A+SL +E+ + P+V TY+ LIK LC +++EA EM ++G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402
Query: 313 IRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
TY+ +D + G E+ + M + G +P T+ LI + + + ++
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
E+ G PD +YTALI F +G +EA + + EM+E L P T L D
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Query: 430 FVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
+ I K ++G +T SK ++ DR QG
Sbjct: 523 RISDAI---KLFLAKTGTDT-TGSKTNELDRSLCSPNHVMYTALIQGL 566
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 167/366 (45%), Gaps = 11/366 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y T+I + F A+ L DEM + P++V ILIR C +
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYT---ILIRGLCGESRI 244
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F + + + ++ C+ +V+ A L + P N +F I
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP-NVVTFGI 303
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C A + ++M+ G+ ++ ++C+I Y KA NL + L L ++++
Sbjct: 304 LIDGLCKT-DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKH 362
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
I D Y+ +I L +++A L++ M++KG PN VTYN+LI CK +++A
Sbjct: 363 EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M ++GI P I T+ +D + G E GL M G P Y LI
Sbjct: 423 IEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ F++ E+ E G P+ + + LI L +G++ +A + ++ K
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA-KTGTDTTG 541
Query: 415 PKTDEL 420
KT+EL
Sbjct: 542 SKTNEL 547
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DV P ++ N++L+G G +V+ +M RG +VV++ +I + +
Sbjct: 153 DVLP-AMQACNMVLDGLVKK-GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K RLFD+M I +Y +I L + +A S+ ++M G+ PN+ TYN+++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQ 342
CK + +A + + EML G+ P + T+ +D + +T E V L M G
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P Y LI + + + +EI ++ PD +Y+ LI L ++EEA
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMK+K LP T L D + +E+ I
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 31/310 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K A +L E+ E P + T ILI+ C V + A
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS---ILIKGLCGVDRMEEADGLLQ 392
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
K+ F + L+ C+ N++ A + K + P N +F+ +++G+C
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKA 451
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A ++ EM +G+ DVV+++ +I + K N + RL +M+ G+ +
Sbjct: 452 -GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 246 YNAVIHALAKGRLVKDAISLM-------------KSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ +I L K + DAI L ++ +PN V Y +LI+ LC
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE-------EVFGLLESMRKMGCQPTN 345
++ +A + F +M G+ P + T +I G +V L + KMG P +
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFT----CIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Query: 346 DTYIMLIKKF 355
Y +L K +
Sbjct: 627 SVYRVLAKGY 636
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 214 IISCYSKARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS---- 268
I++C R ++ L LF + +R + + ++Y+A+IH L +L A LM+
Sbjct: 44 ILTC----RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQC 99
Query: 269 -------------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+E PNV + LI + ++EA + +M +
Sbjct: 100 LQKSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DV 154
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P ++ + LD +++ G + ++ + M G P TY LI R F F+
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++E+ E P YT LI L ++ EA + M+ +LP T + D
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 178/408 (43%), Gaps = 14/408 (3%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K +FDT W + +M P++VT TL I C D +A F K
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTL---IDGCCRQGDFLKAFRLFDEMIEKKI 224
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ + L+ LC + +AE + N + P N ++N +++G+C I ++A
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLP-NLYTYNTMMDGYCKI-AHVKKA 282
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
++ EM G+ +VV+F +I K + + M G+ + VYN +I
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
K + +A+SL +E+ + P+V TY+ LIK LC +++EA EM ++G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402
Query: 313 IRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
TY+ +D + G E+ + M + G +P T+ LI + + + ++
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
E+ G PD +YTALI F +G +EA + + EM+E L P T L D
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Query: 430 FVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
+ I K ++G +T SK ++ DR QG
Sbjct: 523 RISDAI---KLFLAKTGTDTTG-SKTNELDRSLCSPNHVMYTALIQGL 566
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 167/366 (45%), Gaps = 11/366 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y T+I + F A+ L DEM + P++V ILIR C +
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYT---ILIRGLCGESRI 244
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F + + + ++ C+ +V+ A L + P N +F I
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP-NVVTFGI 303
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C A + ++M+ G+ ++ ++C+I Y KA NL + L L ++++
Sbjct: 304 LIDGLCKT-DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKH 362
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
I D Y+ +I L +++A L++ M++KG PN VTYN+LI CK +++A
Sbjct: 363 EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M ++GI P I T+ +D + G E GL M G P Y LI
Sbjct: 423 IEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ F++ E+ E G P+ + + LI L +G++ +A + ++ K
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA-KTGTDTTG 541
Query: 415 PKTDEL 420
KT+EL
Sbjct: 542 SKTNEL 547
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DV P ++ N++L+G G +V+ +M RG +VV++ +I + +
Sbjct: 153 DVLP-AMQACNMVLDGLVKK-GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K RLFD+M I +Y +I L + +A S+ ++M G+ PN+ TYN+++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQ 342
CK + +A + + EML G+ P + T+ +D + +T E V L M G
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P Y LI + + + +EI ++ PD +Y+ LI L ++EEA
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
EMK+K LP T L D + +E+ I
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 141/348 (40%), Gaps = 31/348 (8%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL G + Y+ +I K A +L E+ E P + T ILI+
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS---ILIK 376
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C V + A K+ F + L+ C+ N++ A + K + P
Sbjct: 377 GLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP 436
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N +F+ +++G+C G A ++ EM +G+ DVV+++ +I + K N + R
Sbjct: 437 -NIITFSTLIDGYCKA-GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM-------------KSMEEKGVAP 276
L +M+ G+ + + +I L K + DAI L ++ +P
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE-------EV 329
N V Y +LI+ LC ++ +A + F +M G+ P + T +I G +V
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT----CIVIIQGHFRAMHLRDV 610
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L + KMG P + Y +L K + + + ++S G G
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 42/240 (17%)
Query: 214 IISCYSKARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS---- 268
I++C R ++ L LF + +R + + ++Y+A+IH L +L A LM+
Sbjct: 44 ILTC----RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQC 99
Query: 269 -------------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+E PNV + LI + ++EA + +M +
Sbjct: 100 LQNSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DV 154
Query: 310 SPTIRTYHAFLD-IIRTGE-----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P ++ + LD +++ G +V+G M G P TY LI R F
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYG---DMVARGASPNVVTYGTLIDGCCRQGDFLK 211
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
F++++E+ E P YT LI L ++ EA + M+ +LP T + D
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 176/401 (43%), Gaps = 49/401 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K ++ + A L+ EM G P+ T IL+ C V A+
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPN---SFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCN 184
KR V + + L+S C K D +F K + P N ++ ++NG+C
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCS-KGCLDRGKALFDEMLEKGISP-NVVVYSCLINGFCK 127
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G REA V M++RGI DV +++C+I K K L LFD M G E
Sbjct: 128 K-GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I+ L K + DA + ++M EKG VV+YN+LI LC KLDEA + F +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 305 LQRG--ISPTIRTYHAFL------------------------------------DIIRTG 326
L+ G + P + T++ + + I++G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
++ L + + K+G P++ TY ++I F + +++ + +G P Y
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
L+ +L LE+A + + EMKE P+ + ++ D +
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGT 407
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 44/292 (15%)
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWC 183
KR I + +++ LC+ K ++ A L+ C + F ++ I+++G C
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSF-----TYCILMDGLC 56
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G EA R+ EM ++G+ DVV +S +IS + L + LFD+M GI +
Sbjct: 57 KE-GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNV 115
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
VY+ +I+ K L ++A +++ +M E+G+ P+V TY +I LCK + +A FD
Sbjct: 116 VVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDL 175
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
M ++G P+ TY+ L+ + K GC G+
Sbjct: 176 MTEKGEEPSTVTYNV-------------LINGLCKEGC-------------------IGD 203
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
FK++ + E G + SY LI L NGKL+EA + + + E EP
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEP 255
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + I D+VS++ II+ K + L K + L +M+ E + Y ++ L K
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V++A+ L+ M+ KG+ +VV Y++LI C LD + FDEML++GISP + Y
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + G E +L +M + G QP TY +I + + +++ ++E G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
P +Y LI+ L G + +A + + M EK
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK 214
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 179/435 (41%), Gaps = 53/435 (12%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L K+ G Y T+I+ D AL DEM P++V L I
Sbjct: 67 LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL---IN 123
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
+C A + + + ++ LC+ + A L + K P
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP 183
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+T ++N+++NG C G +A +++ M ++G +VVS++ +I L + ++
Sbjct: 184 -STVTYNVLINGLCKE-GCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241
Query: 230 LFDQMKRMG--IECDRKVYNAVIHALAK-GRL---------------------------- 258
LF + G +E D +N VI L K GRL
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301
Query: 259 ------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
+ A+ L K + + G+ P+ TY+ +I CK L+ A+ F M G+SPT
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361
Query: 313 IRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ Y+ + + + E+ L + M++ C+P ++ ++I + + ++ N
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNK 428
++ + G PD +Y++ I+ L G++EEA + M + P+ D L++ + N
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481
Query: 429 QFVE-----RQIASL 438
+ E RQ+A +
Sbjct: 482 EIEEVINLLRQMADM 496
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 146/377 (38%), Gaps = 56/377 (14%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
W A T L + G Y MI L K + A L D M PS VT
Sbjct: 131 WREA-TAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
+LI C +G A F + + + L+ LC + +A L
Sbjct: 190 ---VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 162 -----FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
+ DV FNT ++ G C G +A ++ M +RG ++ + +I
Sbjct: 247 LEDGNYVEPDVITFNT-----VIQGLCKE-GRLDKAVEIYDTMIERGSFGNLFTCHILIG 300
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
Y K+ + K + L+ ++ ++G+ Y+ +I K ++ A L M+ G++P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEM-------------------------------- 304
+ YN+L+ LCK L++AR+ F EM
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420
Query: 305 ---LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
Q G++P TY +F++ + + G EE G +SM G P N Y LIK F
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480
Query: 359 RQFGNVFKVWNEISENG 375
+ V + ++++ G
Sbjct: 481 DEIEEVINLLRQMADMG 497
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 11/298 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
++T+I L K + D A + D M RG S T ILI Y + +A+
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERG-----SFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF--NIILNGWC 183
+ + + ++ C+ + A+ L F + + F N ++ C
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL-FSRMKISGLSPTLFDYNTLMASLC 373
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S +A R++ EM + D +SF+ +I KA ++H L + M++MG+ D
Sbjct: 374 KE-SSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDA 432
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y++ I+ L+K +++A SM G+ P+ Y+SLIK +++E +
Sbjct: 433 YTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQ 492
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
M G+ + ++ L + E ++E + + + T I K + ++F
Sbjct: 493 MADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQKF 550
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 173/355 (48%), Gaps = 18/355 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ L K D A+ L+++M G+ P ++ T++ + +Y + D A+N F
Sbjct: 19 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD---ALNLFK 75
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNG 181
+ + + L+S LC Y DA L+ N DVF +F+ +++
Sbjct: 76 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF-----TFSALIDA 130
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ G EAE+++ EM +R I +V++S +I+ + L + ++F+ M
Sbjct: 131 FVKE-GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN +I K + V++ + + + M ++G+ N VTYN LI+ L +A D A++ F
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
EM+ G+ P I TY+ LD + + G E+ + E +++ +PT TY ++I+ +
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + ++ +S G PD +Y +I G EEA + EMKE LP
Sbjct: 310 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 4/253 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +++NG C G + A + +M Q + V+ ++ II K +++ L LF +
Sbjct: 18 TYGVVVNGLCKR-GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 76
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI + Y+++I L DA L+ M E+ + P+V T+++LI K K
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
L EA + +DEM++R I P+I TY + ++ + +E + E M C P TY
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK F ++++ +V+ E+S+ G + +Y LI LF G + A + + EM
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
Query: 411 LLPEPKTDELLQD 423
+ P T L D
Sbjct: 257 VPPNIMTYNTLLD 269
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K K A L DEM PS+VT +L I +C +HD
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFC-MHD-----RLDE 174
Query: 128 AYKRFKFAVG------IEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILN 180
A + F+F V + + L+ C+YK V++ E ++ NT ++NI++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G G A+ ++ EM G+ ++++++ ++ K L K + +F+ ++R +E
Sbjct: 235 GLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN +I + K V+D L ++ KGV P+VV YN++I C+ +EA
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353
Query: 301 FDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMG 340
F EM + G P Y+ + +R G E L++ MR G
Sbjct: 354 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ L D+M G + D Y V++ L K A +L+ ME+ + P V+ YN++I
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
LCK + +D+A F EM +GI P + TY + + + + LL M + P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T+ LI F + + K+++E+ + P +Y++LI+ ++ +L+EA Q +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 405 EMKEKQLLPEPKT 417
M K P+ T
Sbjct: 181 FMVSKHCFPDVVT 193
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 42/249 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y+ +I L + D A + EM P+++T TLL C
Sbjct: 219 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL---DGLCKNG 275
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ +A+ F +R K I + ++ +C+ V+D
Sbjct: 276 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED--------------------- 314
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
GW ++ +S +G+ DVV+++ +IS + + + + LF +MK
Sbjct: 315 ---GW-----------DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + YN +I A + + + L+K M G A + T L+ + +LD
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD-- 417
Query: 298 RQAFDEMLQ 306
++F +ML
Sbjct: 418 -KSFLDMLS 425
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 172/359 (47%), Gaps = 9/359 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A +T + T+I+ L + + A+ L DEM P+ VT ++I +C +
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYN---VMIEGHCKEGNT 557
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+A + ++ L+S+LC V +A+ + +++ F N ++ +
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+G+C G R+A V EM +RG+ D+V ++ +I K ++ V L M
Sbjct: 618 LHGYCKE-GRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ D+ +Y ++I +K VK A + M ++G PN+VTY +LI LCKA +D+A
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ EML +P TY FLD + R G E+ L M K G +Y +L++ F
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGF 795
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + K+ +E+ +N PD +Y+ +I+ G L+ A +++ M K L P+
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPD 854
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 179/425 (42%), Gaps = 66/425 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-- 114
K+ G S Y+ +I L K KFD A L EM GE G T ILI +C
Sbjct: 358 KKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM--GEKGLC-ANDVTYSILIDSFCRR 414
Query: 115 -----AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDV 167
A+H +G+ I A + + + L++ C+ N+ A +K +
Sbjct: 415 GKLDTAIHFLGKMIMA-------GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGL 467
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P S+ +++G+CN G EA R++ EM+ +GI + +F+ +IS +A +
Sbjct: 468 KP-TVVSYTSLISGYCNK-GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
RLFD+M + + YN +I K G VK A L+ M +KG+ P+ TY LI
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK-AFELLNQMVQKGLVPDTYTYRPLIS 584
Query: 287 PLCKARKLDEARQAFD-----------------------------------EMLQRGISP 311
LC ++ EA++ D EM++RG+
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 312 TIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ Y +D + VFGLL++M +P Y +I +S+ F +W
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQD 423
+ + + G P+ +YT LI+ L G +++A + EM P T D L ++
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764
Query: 424 WSYNK 428
S K
Sbjct: 765 GSMEK 769
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 41/348 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G S Y T++ L KV++F+ ++DEM P+ +L+ +RR
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRK---- 344
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
G+ ++AF R K G + +L Y N
Sbjct: 345 --GKVVDAFDLVNRVKKV-------GAMPSLFVY------------------------NA 371
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++N C G EAE ++ EM ++G+C + V++S +I + + L + +M
Sbjct: 372 LINSLCKD-GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMA 430
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI+ YN++I+ K + A+S M +KG+ P VV+Y SLI C KL EA
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA 490
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ + EM +GI+P T+ + + + F L + M + P TY ++I+
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ F++ N++ + G PD +Y LI +L G++ EA ++
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 20/352 (5%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K+R+ D L E+ P + + +IR +C + + +A +
Sbjct: 203 LAKIRRVDMVLVLFGEILSMGIRPDI---YIYVAVIRSFCELKNFAKAKEMIQRMESSDL 259
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI----IGS 188
V + + L+ LC+ K V +A + K + ++L G C + +G+
Sbjct: 260 NVVV--YNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVL-GLCKVQEFEVGA 316
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
V EM + G + S ++ + + L +++K++G VYNA
Sbjct: 317 G-----VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNA 371
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I++L K +A L K M EKG+ N VTY+ LI C+ KLD A +M+ G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431
Query: 309 ISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
I T+ Y++ ++ + + M G +PT +Y LI + + F
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++E++ G P+ ++T LI ALF ++ +A + + EM E+ ++P T
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+++ +K R + VL LF ++ MGI D +Y AVI + + + A +++ ME
Sbjct: 199 VLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD 258
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVF 330
+ NVV YN LI LCK +++ EA + + ++Q+G++ + TY L ++ E
Sbjct: 259 L--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGA 316
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
G+++ M ++G PT L++ R + + F + N + + G P Y ALI++L
Sbjct: 317 GVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSL 376
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+GK +EA + EM EK L T +L D
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ ++N C G +AE +W EM + V++ C + ++ ++ K ++L
Sbjct: 715 NIVTYTTLINELCKA-GLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M + G+ + YN ++ K V++A L+ M + + P+ +TY+++I C+
Sbjct: 774 HNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDT 347
LD A + +D ML +G+ P Y+ + GE + F L + M + G +P T
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892
Query: 348 YIMLIKKFSR 357
+ L SR
Sbjct: 893 HKSLSHGASR 902
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 186/373 (49%), Gaps = 15/373 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I L K K + A ++++M+ P++V+ TL I YC + G+ A
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTL---IDGYCKLGGNGKMYKADA 282
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
K + + + F L+ + N+ + + ++DV P N ++N ++NG
Sbjct: 283 VLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP-NVITYNSLINGL 341
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
CN G EA + +M G+ +++++ +I+ + K + + L +FD +K G
Sbjct: 342 CNG-GKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPT 400
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
++YN +I A K + D +L + ME +G+ P+V TYN LI LC+ ++ A++ FD
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G+ P + T+H ++ GE + LL+ M KMG +P + TY +++K + +
Sbjct: 461 QLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519
Query: 360 QFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ ++ E + +SY L+ GKLE+A+ EM EK L+P T
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 419 ELLQDWSYNKQFV 431
E++++ +K FV
Sbjct: 580 EIVKEEMVDKGFV 592
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 148/303 (48%), Gaps = 12/303 (3%)
Query: 121 RAINAFYAYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSF 175
R+ + Y YK R K + F +++ALC+ + A +M + V+ + N S+
Sbjct: 203 RSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME-DMKVYGYSPNVVSY 261
Query: 176 NIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N +++G+C + G+ + +A+ V EM + + ++ +F+ +I + K NL L++F +
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + + YN++I+ L G + +AI + M GV PN++TY+SLI CK
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ EA FD + +G PT R Y+ +D + G ++ F L E M + G P TY
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI R K++++++ G PD ++ L+ G+ +A EM +
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMG 500
Query: 411 LLP 413
L P
Sbjct: 501 LKP 503
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 12/276 (4%)
Query: 187 GSSREAERVWMEMSQ-RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS + ++ +S +C + + ++ Y+ F + G +
Sbjct: 131 GSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMS 190
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++ AL K D L K M + + PNV T+N +I LCK K+++AR ++M
Sbjct: 191 CKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250
Query: 306 QRGISPTIRTYHAFLD----IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
G SP + +Y+ +D + G+ + +L+ M + P T+ +LI F +
Sbjct: 251 VYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDD 310
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-D 418
KV+ E+ + P+ +Y +LI+ L GK+ EA +M + P T
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISK 454
L+ + N E +L GQ TR ++
Sbjct: 371 SLINGFCKNGMMKE----ALDMFDSVKGQGTRPTTR 402
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 60/263 (22%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G +TR Y+ +I K+ K D +AL +EM R V
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM-------------------EREGIV 433
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
DVG + L++ LCR N++ A+ L NK + T
Sbjct: 434 PDVGT-------------------YNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVT-- 472
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+I++ G+C+ G SR+A + EMS+ G+ ++++ ++ Y K NL + QM
Sbjct: 473 FHILMEGYCS-RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQM 531
Query: 235 -KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
K + + YN ++ ++ ++DA L+ M EKG+ PN +TY ++K
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-EIVK------- 583
Query: 294 LDEARQAFDEMLQRGISPTIRTY 316
+EM+ +G P I +
Sbjct: 584 --------EEMVDKGFVPDIEGH 598
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 204/458 (44%), Gaps = 54/458 (11%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSG 60
A+ L++IL + E + + E CG K+S+++V +VL+ R D E FF W + G
Sbjct: 1600 AQELLEILETEMEEVREHKLR-EYCG-KLSTDIVVDVLNHAR-DVEPTIQFFEWCHGRHG 1656
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ--TLLILIRRYCAVHD 118
Y H+ ++ ++ L R++ A +M E+ PS T ++R YC +
Sbjct: 1657 YTHTAFAFNRLLEFLVNKRQYKRA----HQMLIAESKPSSFQANAFTYSTIVRGYCEDGE 1712
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVF---- 168
+A+ K+ + + + +L+ LC++ ++A L+ C D++
Sbjct: 1713 TRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNI 1772
Query: 169 --------------------------PFNTKSFNIILNGWCNIIGSSR----EAERVWME 198
P + ++N +++G C G+ R A R++ E
Sbjct: 1773 LINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRK-GNGRFRVERAFRLFEE 1831
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +G V+++ +I + + + ++ D M G D YN +I+ AK +
Sbjct: 1832 MVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGM 1891
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ L M +G P+VVTYNS++ CKA K++EA + F EM RGI P RTY +
Sbjct: 1892 MDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTS 1951
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
D ++ G ++ L MRK G +Y+ LI + + F++ E+ E G
Sbjct: 1952 ITDACLKAGRMQDAHAYLVEMRKEGLVDAI-SYVALISTICKLGKGKLGFQLLREMLEKG 2010
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ ++ + AL ++A E++++ P
Sbjct: 2011 FKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSP 2048
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 15/306 (4%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKSFNIILNGWCN 184
+ Y FA F LL L + + A ++ F N +++ I+ G+C
Sbjct: 1655 HGYTHTAFA-----FNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCE 1709
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +R+A + M + + + ++ I++ K + L L M D
Sbjct: 1710 D-GETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIY 1768
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR----KLDEARQA 300
YN +I+AL K ++DA L++ M+ + ++VTYN+LI LC+ +++ A +
Sbjct: 1769 TYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRL 1828
Query: 301 FDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F+EM+ +G +PT TY +D ++ E+ +L+ M + GC TY MLI +F++
Sbjct: 1829 FEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAK 1888
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ E+ G PD +Y +++ GK+EEA++ + EMK + + P +T
Sbjct: 1889 AGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRT 1948
Query: 418 DELLQD 423
+ D
Sbjct: 1949 YTSITD 1954
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-ILIRRYCAVHDVGRAINAF 126
Y+ +I L KV + + A L++ M+ E +VT TL+ L R+ V RA F
Sbjct: 1770 YNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 1829
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNI 185
+ ++ AL R K + A+ ++ +++ F+ ++N+++N +
Sbjct: 1830 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKA 1889
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +A +++EM RG DVV+++ I+ + KA + + +LF +MK GI + +
Sbjct: 1890 -GMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRT 1948
Query: 246 YNAVIHA-LAKGRL--------------VKDAIS-------------------LMKSMEE 271
Y ++ A L GR+ + DAIS L++ M E
Sbjct: 1949 YTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGKLGFQLLREMLE 2008
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
KG PN+VT+N + + L K D+A+ E+ Q+ SP +
Sbjct: 2009 KGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPL 2050
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 200/443 (45%), Gaps = 46/443 (10%)
Query: 20 NKIEECGIKVSS-ELVSEVLSWVRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+KI + G+ S S +L + RN D +A+ F + G + Y T+I L +
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK-GCRRNEVSYTTIIHGLCE 296
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+ D +L +MR + P T +T ++I ++ F +
Sbjct: 297 AGRIDEGISLFKKMREDDCYP---TVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN---------II 186
+ + ++ A+C+ + + ++ ++ K + P + ++N ++ G+C I+
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVP-SVVTYNALIRGYCEEGRIEAALEIL 412
Query: 187 G-----SSREAERVWME--------------------MSQRGICYDVVSFSCIISCYSKA 221
G + R ER + E M + + +V+++ +I KA
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +L D +K G+ D+ Y+ I L K + +++A L S++EKG+ N V Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRK 338
+LI CKA K+DEA + M P TY++ + + + G +E ++E+M K
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK 592
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
MG +PT TY +LI++ R F + +V+N++ G+ PD +YTA IH +G ++E
Sbjct: 593 MGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKE 652
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A M E ++P+ T LL
Sbjct: 653 AEGMMARMIEAGVMPDSLTYTLL 675
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 51/359 (14%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S R Y+ ++ +L + D + EM P++ T T+ + Y + ++ A
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTM---VNAYSKMGNIVEA- 233
Query: 124 NAFYAYKRFKFAVGIEDFQ--GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
Y K F+ + + F L+ CR +V A K FN++ N
Sbjct: 234 -NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSA--------------YKVFNMMPNK 278
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C R E VS++ II +A + + + LF +M+
Sbjct: 279 GC------RRNE---------------VSYTTIIHGLCEAGRIDEGISLFKKMREDDCYP 317
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y +IHAL + + L M E+ PNV TY ++ +CK RKLDE+R+
Sbjct: 318 TVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRIL 377
Query: 302 DEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+EM+++G+ P++ TY+A + I E+ GL+ES C+P TY LI F
Sbjct: 378 NEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES---NNCRPNERTYNELICGF 434
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
S+ + + +++ E+ P +Y +LIH G + A++ +KE L+P+
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 13/302 (4%)
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
K V ++D + LL L R N D N F + +S+N +L + E
Sbjct: 147 IKACVSVDDIRFLLDFL-RQMNRDD-------NDIKFKLSVRSYNELLMMLARFLMID-E 197
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+RV+ EM I ++ + + +++ YSK N+ + ++ + G+ D Y ++I
Sbjct: 198 MKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLIL 257
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ V A + M KG N V+Y ++I LC+A ++DE F +M + P
Sbjct: 258 GYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYP 317
Query: 312 TIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
T+RTY + + + E L MR+ C+P TY +++ + R+ ++
Sbjct: 318 TVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRIL 377
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYN 427
NE+ E G P +Y ALI G++E A + M+ P +T +EL+ +S
Sbjct: 378 NEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKR 437
Query: 428 KQ 429
K
Sbjct: 438 KH 439
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ-TLLILIRRYCAV 116
+S S Y+++I + K FD+A+ L+D ++ E G LV Q T + I C
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLK--ENG--LVPDQWTYSVFIDTLCKS 507
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A + F + K + L+ C+ + +A L+ ++D P N+ +
Sbjct: 508 KRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLP-NSST 566
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C G +E + MS+ G+ V +++ +I + + R+F+QM
Sbjct: 567 YNSLIYGVCKE-GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM 625
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G + D Y A IH VK+A +M M E GV P+ +TY LI +
Sbjct: 626 VSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLA 685
Query: 295 DEARQAFDEMLQRGISPT 312
+A ML G P+
Sbjct: 686 YDAFNVLKRMLDAGCDPS 703
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 179/395 (45%), Gaps = 45/395 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+GY +T ++T+I L K A ALID M P LVT +++ C D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG---VVVNGLCKRGD 236
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
A ++ K G+ + ++ LC+ K++ DA +L K + P N +++
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP-NVVTYS 295
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ CN G +A R+ +M +R I DV +FS +I + K L + +L+D+M +
Sbjct: 296 SLISCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 237 MGIE---------------------------------C--DRKVYNAVIHALAKGRLVKD 261
I+ C D Y+ +I K + V +
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDE 414
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ L + M ++G+ N VTY +LI+ L +A D A++ F EM+ G+ P I TY+ LD
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 322 -IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G E+ + E +++ +PT TY ++I+ + + + + ++ +S G P
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
D +Y +I G EEA + EMKE LP
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 176/401 (43%), Gaps = 47/401 (11%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ +++ + K+ KFD +L ++M+ + T ILI +C + A+
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHN---HYTYSILINCFCRRSQLPLAL 136
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILN 180
+ + I LL+ C K + +A L MF + NT +FN +++
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG--YQPNTVTFNTLIH 194
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G + + EA + M +G D+V++ +++ K + L ++M++ +E
Sbjct: 195 GLF-LHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC----------- 289
+Y +I L K + + DA++L K ME KG+ PNVVTY+SLI LC
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 290 ------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFLD---I 322
K KL EA + +DEM++R I P+I TY + ++ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+E + E M C P +Y LIK F + ++ +++ E+S+ G + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
YT LI LF G + A + + EM + P T L D
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 181/400 (45%), Gaps = 15/400 (3%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R D + AF L +Q Y T+I L K + D A L EM P++V
Sbjct: 234 RGDTDLAF-ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T +L+ + Y D R ++ K + F L+ A + + +AE L
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ + P + +++ ++NG+C + EA++++ M + DVVS+S +I +
Sbjct: 350 DEMVKRSIDP-SIVTYSSLINGFC-MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA+ + + + LF +M + G+ + Y +I L + A + K M GV PN++
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESM 336
TYN+L+ LCK KL++A F+ + + + PTI TY+ ++ + + G E+ + L ++
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P Y +I F R ++ E+ E+G P+ Y LI A +G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 397 EEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQFVE 432
E + + EM+ + T +L D +K F++
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 627
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G +T Y T+I L + D A + EM P+++T TLL C
Sbjct: 424 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL---DGLCKNG 480
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKS 174
+ +A+ F +R K I + ++ +C+ V+D L FCN K V P + +
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL-FCNLSLKGVKP-DVVA 538
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +++G+C GS EA+ ++ EM + G + ++ +I + + L +M
Sbjct: 539 YNTMISGFCR-KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+ G D V + L GRL K + ++
Sbjct: 598 RSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DA++L M + P+++ ++ L+ + K K D ++M G+ TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ +L M K+G +P T L+ + ++ + +++ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ ++ LIH LFL+ K EA M K P+ T
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVT 223
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 179/388 (46%), Gaps = 17/388 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ M+ + + +FD L+D MRG E P LV+ T LI R G A +
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNT-LINARAKSGCLAPGSAFDLLL 124
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMF--CNKDVFPFNTKSFNIILNG 181
++ + + L+SA + N+ DA E +M C D++ +N + ++G
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAM---VSVHG 181
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G +++AER++ E+ ++G D V+++ ++ ++K + V R+ +++ R G +
Sbjct: 182 RC---GKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKK 238
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN +IH K + A+ L M G P+ VTY LI L K ++ +A +
Sbjct: 239 DGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVL 298
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM G+ PT+ T+ A + G EE M G +P Y++++ +R
Sbjct: 299 EEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARS 358
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK-QLLPEPKT 417
+ ++ + +G PD + Y ++ AL + +E +M+ Q+ P+ +
Sbjct: 359 GDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS 418
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQS 445
L++ ++ + A L+ H+P S
Sbjct: 419 SILIKAECISQGAKLLKKACLQGHEPDS 446
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 19/297 (6%)
Query: 131 RFKFAVG--IEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNG----W 182
RF G ++ F ++ R D L+ +++ P + SFN ++N
Sbjct: 54 RFPHLPGATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEP-DLVSFNTLINARAKSG 112
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC- 241
C GS+ + + +E+ Q G+ DV++++ +IS S+ NL + +F++M M EC
Sbjct: 113 CLAPGSAFD---LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEM--MASECR 167
Query: 242 -DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YNA++ + +DA + + + EKG P+ VTYNSL+ K D +
Sbjct: 168 PDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERV 227
Query: 301 FDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+E+++ G TY+ + + + G + GL + MR +GC P TY +LI +
Sbjct: 228 CEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGK 287
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + KV E+++ G P +++ALI A G+ EEA + + M + P+
Sbjct: 288 MDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPD 344
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 46/330 (13%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
+AF L +Q G Y+T+I+ + D A A+ +EM E P L T
Sbjct: 118 SAFDLLLEV-RQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWT---- 172
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCN 164
+ ++S R QDAE +
Sbjct: 173 ----------------------------------YNAMVSVHGRCGKAQDAERMFRELVE 198
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K P + ++N +L + G + ERV E+ + G D ++++ +I Y K L
Sbjct: 199 KGFKP-DAVTYNSLLYAFAK-EGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRL 256
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L L+D+M+ +G D Y +I +L K + DA +++ M + G+ P +VT+++L
Sbjct: 257 DLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSAL 316
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGC 341
I K + +EA + F M+ G+ P Y LDII R+G+ ++ L ++M G
Sbjct: 317 ICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGY 376
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+P N Y +++ ++ ++ + V ++
Sbjct: 377 RPDNALYQVMLAALAKGNEYDEIEAVVQDM 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 129/317 (40%), Gaps = 38/317 (11%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K T+++++ + D+ + + K + + ++ ++S LCR K +D E +
Sbjct: 692 ISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELM 751
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ +EM + G D+ + ++ Y+
Sbjct: 752 V-----------------------------------VEMERAGFEPDLTILNTLLLMYTG 776
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
N K + ++ + G+E + YN +I ++ ++ +L+ M +KG+ P + +
Sbjct: 777 NGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLES 836
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
Y SL+ KA+ ++A Q F+E+ +G YH + I R + LL SM+
Sbjct: 837 YKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMK 896
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G +PT T +L+ + KV N + + Y+ + +A NG
Sbjct: 897 EDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYN 956
Query: 398 EAHQYYMEMKEKQLLPE 414
+EMK + P+
Sbjct: 957 LGITKLLEMKADGVKPD 973
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 153/366 (41%), Gaps = 8/366 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + Y +MI+ K+ +TA L+DE ++G SL + + +I Y +
Sbjct: 549 GIEPSRKIYESMISAYCKLGFPETAHQLMDE--AVQSGISLNILSSRVTMIEAYGKIKLW 606
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNT-KSFNII 178
A N K+ + ++ + L+ A + A + + P T S N +
Sbjct: 607 QHAENFVKGLKQ-EPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGM 665
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ I G E + E+ G + ++ ++KA ++ +V+++++ MK G
Sbjct: 666 MRALI-IDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAG 724
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ +Y ++I L + + +D ++ ME G P++ N+L+ D+
Sbjct: 725 YLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTV 784
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + +L+ G+ P TY+ + + EE F LL M K G P ++Y L+
Sbjct: 785 EVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAAS 844
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + + +++ EI G +RS Y L+ +A Q MKE + P
Sbjct: 845 GKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTI 904
Query: 416 KTDELL 421
T +L
Sbjct: 905 ATMHIL 910
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 157/406 (38%), Gaps = 53/406 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G+ Y+TMI + GK+ + D A L DEMR P VT L+ + + +
Sbjct: 233 RAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRIS 292
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
D G+ + G++ SAL C Y
Sbjct: 293 DAGKVLEEMAD-------AGLKPTLVTFSALICAYAKG---------------------- 323
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
G EA R + M G+ D +++ ++ +++ ++ K++ L+ M
Sbjct: 324 ----------GRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMN 373
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLD 295
G D +Y ++ ALAKG + ++++ ME + P +V+ + LIK C +
Sbjct: 374 DGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVS-SILIKAEC----IS 428
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRK---MGCQPTNDTYI 349
+ + + +G P ++ + LD T EE LL+ +R+ C ++ I
Sbjct: 429 QGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSI 488
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
ML+ K + + + G D + Y LI L EA Q + +M+
Sbjct: 489 MLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFI 548
Query: 410 QLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKK 455
+ P K E + +Y K L QSG + ++S +
Sbjct: 549 GIEPSRKIYESMIS-AYCKLGFPETAHQLMDEAVQSGISLNILSSR 593
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/360 (17%), Positives = 143/360 (39%), Gaps = 48/360 (13%)
Query: 21 KIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAILGKVR 79
++++ G K+S V +L + ++ G K++GY + Y +MI++L + +
Sbjct: 684 ELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNK 743
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
++ ++ EM P L TLL++ Y + + + +++ +
Sbjct: 744 RYRDVELMVVEMERAGFEPDLTILNTLLLM---YTGNGNFDKTVEVYHSILEAGLEPNED 800
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ R N++ E N EM
Sbjct: 801 TYNTLIVMYSR--NLRPEEGFTLLN---------------------------------EM 825
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++G+ + S+ +++ KA+ + +LF++++ G +R +Y+ ++
Sbjct: 826 GKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNH 885
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM----LQRGISPTIRT 315
A L+ SM+E G+ P + T + L+ A DEA + + + L+ P
Sbjct: 886 SKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTV 945
Query: 316 YHAFLDIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
++A+L + G+ G+ L M+ G +P + + I+ S + + + N + +
Sbjct: 946 FNAYL---KNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLNSLRD 1002
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG----EEVFG 331
V +N+++ ++ + D+ RQ D M + + P + +++ ++ ++G F
Sbjct: 62 TVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFD 121
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
LL +R++G +P TY LI S+ + V+ E+ + PD +Y A++
Sbjct: 122 LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHG 181
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK ++A + + E+ EK P+ T
Sbjct: 182 RCGKAQDAERMFRELVEKGFKPDAVT 207
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 157/340 (46%), Gaps = 15/340 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
TL I+I +C A + + + F L++ LC V A L+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C D+ +N+ I+NG C G + A + +M +R + DV ++S II
Sbjct: 185 VENGCQPDMVTYNS-----IVNGICRS-GDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + + LF +M+ GI+ YN+++ L K D L+K M + + PNV
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
+T+N L+ K KL EA + + EM+ RGISP I TY+ +D + E +L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + C P T+ LIK + ++ + KV+ IS+ G + +Y+ L+ +GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
++ A + + EM +LP+ T +L D + +E+ +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 168/405 (41%), Gaps = 47/405 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
GY T ++T+I L K A L+D M P +VT +++
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212
Query: 108 --------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+I C + AI+ F + + + L+
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ D L+ ++++ P N +FN++L+ + G +EA ++ EM RGI
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKE-GKLQEANELYKEMITRGIS 330
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++++++ ++ Y L + + D M R D + ++I + V D + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+++ ++G+ N VTY+ L++ C++ K+ A + F EM+ G+ P + TY LD +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E+ + E ++K Y +I+ + + + + ++ + G P+ +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I L G L EA+ +M+E P D +YN
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAP--------NDCTYN 547
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 8/277 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ + K K A L EM P+++T TL+ YC + + A N
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM---DGYCMQNRLSEANNMLD 357
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
R K + I F L+ C K V D + +K N +++I++ G+C
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS- 416
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + AE ++ EM G+ DV+++ ++ L K L +F+ +++ ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + KG V+DA +L S+ KGV PNV+TY +I LCK L EA +M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMG 340
G +P TY+ + +R G+ L+E M+ G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 38/305 (12%)
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
AI F R + G+ DF SA+ R TK FN++L+
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIAR---------------------TKQFNLVLD- 109
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C ++ GI +++ + + +I+C+ + + ++ ++G E
Sbjct: 110 FCK-------------QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +N +I+ L V A+ L+ M E G P++VTYNS++ +C++ A
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+M +R + + TY +D + R G + L + M G + + TY L++ +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
++ + + ++ P+ ++ L+ GKL+EA++ Y EM + + P T
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 419 ELLQD 423
L D
Sbjct: 337 NTLMD 341
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM + +V FS S ++ + + VL Q++ GI + N +I
Sbjct: 71 DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + A S++ + + G P+ T+N+LI LC K+ +A D M++ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY++ ++ I R+G+ F +L M + + TY +I R +
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ G +Y +L+ L GK + +M ++++P T +L D
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|357144169|ref|XP_003573197.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Brachypodium distachyon]
Length = 531
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 180/416 (43%), Gaps = 26/416 (6%)
Query: 3 TLVDILRE-FSHK---RSEMRNKIEECGIKVSSELVSEVLSWVRN----DWEAAFTFFLW 54
+L D LR F HK R+ + + G+ + L E LS V N A F W
Sbjct: 61 SLADRLRVVFLHKPPGRAALHRALSSTGLDAALALHPEALSNVVNAGNLSGAATVDLFDW 120
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A + S +T+I LG+ + F + ++ MR P TL I+I
Sbjct: 121 AISNAKLPPSLHTCNTVIRALGRRKFFASIEDALEIMRKNGIFPD---PTTLEIIIDSLV 177
Query: 115 AVHDVGRAINAFYAYKRFKFAVGI-------EDFQGLLSALCRYKNVQDAEHLMFCNK-D 166
A + RA+ K +F G F L++ LC+ +V A L+ + D
Sbjct: 178 ASRQINRAVQLL---KSDQFGFGFCQTCHRKVAFSALINCLCQRSHVGVASSLLQAARGD 234
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ +N ++ GW G + E W M + G+ D VS +I +A +
Sbjct: 235 HLDLDKHVYNDVIGGWARF-GRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALGRAGQPEE 293
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L++F++M G YNA+I + I K M +K PN TY +I+
Sbjct: 294 GLKVFEKMVHEGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIR 353
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT-GEEVFGLL--ESMRKMGCQP 343
L +AR++ +A Q F +M RG+ P F++ + T G L+ RK GC
Sbjct: 354 ALLRARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPPHAALMIYRKSRKAGCTI 413
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ Y +L+ + +R+ + G V K+W E+ E+G+ D+ Y +++ L GKL+ A
Sbjct: 414 SLKAYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLDAA 469
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 19/290 (6%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+A K + ++ AL R + +++DA +M N +FP + + II++
Sbjct: 120 WAISNAKLPPSLHTCNTVIRALGRRKFFASIEDALEIMRKN-GIFP-DPTTLEIIIDS-- 175
Query: 184 NIIGSSREAERV--WMEMSQRGI-----CYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ +SR+ R ++ Q G C+ V+FS +I+C + ++ L +
Sbjct: 176 --LVASRQINRAVQLLKSDQFGFGFCQTCHRKVAFSALINCLCQRSHVGVASSLLQAARG 233
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D+ VYN VI A+ V M E G+AP+ V++ LI+ L +A + +E
Sbjct: 234 DHLDLDKHVYNDVIGGWARFGRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALGRAGQPEE 293
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIK 353
+ F++M+ G PT Y+A + + I +G+ + M C P + TY +I+
Sbjct: 294 GLKVFEKMVHEGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIR 353
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
R R+ + +++ ++ G P+ T I L G A Y
Sbjct: 354 ALLRARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPPHAALMIY 403
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 38/224 (16%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI----ECDRKV-YNAVIHAL 253
M + GI D + II +R +++ ++L + + G C RKV ++A+I+ L
Sbjct: 157 MRKNGIFPDPTTLEIIIDSLVASRQINRAVQLL-KSDQFGFGFCQTCHRKVAFSALINCL 215
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ V A SL+++ + + YN +I + ++D+ + ML+ G++P
Sbjct: 216 CQRSHVGVASSLLQAARGDHLDLDKHVYNDVIGGWARFGRVDKLEHFWAMMLEDGLAP-- 273
Query: 314 RTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+EV ++ LI+ R Q KV+ ++
Sbjct: 274 -------------DEV-----------------SHCHLIEALGRAGQPEEGLKVFEKMVH 303
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G GP ++Y ALI +G L+ +YY +M +K P T
Sbjct: 304 EGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSAT 347
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + +I LG+ + + + ++M GP+ L+ + +
Sbjct: 268 EDGLAPDEVSHCHLIEALGRAGQPEEGLKVFEKMVHEGYGPTTTAYNALIF---NFISSG 324
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKS 174
D+ R I + + ++ AL R + V DA + MF + V P NT
Sbjct: 325 DLDRCIKYYKDMVDKNCPPNSATYCKMIRALLRARRVADALQMFGDMF-TRGVLP-NTGD 382
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ + C G A ++ + + G + ++ +++ ++ VL+++++M
Sbjct: 383 ITLFIEPLCTY-GPPHAALMIYRKSRKAGCTISLKAYKLLLARLARFGKSGIVLKIWEEM 441
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G D+++Y +++ L + A+S+++ KG+ V Y+ L L + K+
Sbjct: 442 QESGHPSDKEIYEFIVNGLCNVGKLDAAVSVVEESLMKGICLGRVVYSKLNNRLLEMDKV 501
Query: 295 DEA 297
+ A
Sbjct: 502 ETA 504
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Query: 182 WCNIIGSSREAERV------WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C +I + A RV + +M RG+ + + I H L ++ + +
Sbjct: 348 YCKMIRALLRARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPPHAALMIYRKSR 407
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G K Y ++ LA+ + + + M+E G + Y ++ LC KLD
Sbjct: 408 KAGCTISLKAYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLD 467
Query: 296 EARQAFDEMLQRGI 309
A +E L +GI
Sbjct: 468 AAVSVVEESLMKGI 481
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 10/365 (2%)
Query: 64 STREYHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
+ R Y +I A+ G RK + A L +EM+ P++ T +LI C + + A
Sbjct: 298 TVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNV---HTYTVLIDGLCKENKMDEA 353
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNG 181
+ + L+ C+ + DA E L + NT+++N ++ G
Sbjct: 354 RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C +A + +M +R + +++++ +I K +L RL M G+
Sbjct: 414 LCKK-RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D+ Y+ I L K V++A +L S++ KGV N V Y +LI CK K+D A
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532
Query: 302 DEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ ML P TY+ ++ + + +E L+ M MG +PT TY +LI + +
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
F + KV+N + G PD +YTA +HA F G LEE +M E+ +LP+ T
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652
Query: 419 ELLQD 423
+L D
Sbjct: 653 TVLID 657
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 70/430 (16%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA------------------- 84
D + A +FF W + G+ H+ Y +M+ IL + R A
Sbjct: 80 DPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF 139
Query: 85 --------------------------------WALIDEMR-------GGETGPSLVTKQT 105
+ LIDEM+ + P++ T
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ--GLLSALCRYKNVQDA-EHLMF 162
+ + YC + +V A YA K + + + F L+ CR K V +A E +
Sbjct: 200 M---VNGYCKIGNVVEA--ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ N S+ +++G C G EA +++ +M++ C V +++ +I S +
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEA-GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L LF++MK G E + Y +I L K + +A ++ M EKG+ P+VVTYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKM 339
+LI CK +D+A + D M P RTY+ + + R + LL M +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P+ TY LI + + +++ + ++ENG PD+ +Y+ I L G++EEA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 400 HQYYMEMKEK 409
+ +K K
Sbjct: 494 GTLFDSVKAK 503
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 162/413 (39%), Gaps = 61/413 (14%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G S Y+ +I K D A+ ++D M GP+ T L I C
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL---ICGLCKKR 418
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
V +A+ K + + + L+ C+ +++ A L+ N++ + +++
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ ++ C G EA ++ + +G+ + V ++ +I Y K + L ++M
Sbjct: 479 VFIDTLCKE-GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ YN +I L K + +K+A SL+ M GV P VVTY LI + K D
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-------------DII-RTGEE-------------- 328
A + F+ M+ G P + TY AFL D+I + EE
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Query: 329 ----------VFGLLESMRKMGCQPTNDTYIMLIKKFSRWR------------------Q 360
F L+ M GC+P+ +LIK S +
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLE 717
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ K++ ++ E+G D S Y ALI +LEEA MKE+ + P
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 168/434 (38%), Gaps = 100/434 (23%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV---- 119
+TR Y+ +I L K RK A AL+++M + PSL+T +L I C V+D+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL---IHGQCKVNDLESAY 459
Query: 120 ----------------------------GRAINAFYAYKRFKFAVGIED----FQGLLSA 147
GR A + K A G++ + L+
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK-AKGVKANEVIYTALIDG 518
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
C+ + A L+ N P N+ ++N+++ G C +EA + +M G+
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKE-KKMKEASSLVAKMLTMGVK 576
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
VV+++ +I K L++F+ M +G + D Y A +HA ++++ +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 266 MKSMEEKGVAPNVVTYNSLI-----------------------------------KPLCK 290
+ M E+G+ P++VTY LI K L
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696
Query: 291 ARKLDEAR------------------QAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
++ E R + F++M++ G + + Y A + EE
Sbjct: 697 ENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 756
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
GL+ M++ G P+ D Y L+ + + ++ + + ENG P SY L+
Sbjct: 757 QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCG 816
Query: 390 LFLNGKLEEAHQYY 403
L++ G E+A +
Sbjct: 817 LYIEGSNEKAKAVF 830
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 162/440 (36%), Gaps = 70/440 (15%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND E+A+ L ++G Y I L K + + A L D ++ + V
Sbjct: 453 NDLESAYRL-LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEH 159
L I YC VG+ A+ +R + + + L+ LC+ K +++A
Sbjct: 512 YTAL---IDGYC---KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 160 LM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L+ V P T IL G G+ A +V+ M G DV +++ +
Sbjct: 566 LVAKMLTMGVKP--TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y L +V + +M GI D Y +I A+ L A +K M + G P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 278 VVTYNSLIKPLCKARKLDEAR------------------QAFDEMLQRGISPTIRTYHAF 319
+ + LIK L ++ E R + F++M++ G + + Y A
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGAL 743
Query: 320 LDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ EE GL+ M++ G P+ D Y L+ + + ++ + + ENG
Sbjct: 744 IAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGL 803
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYME------------------------------- 405
P SY L+ L++ G E+A +
Sbjct: 804 LPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSE 863
Query: 406 ----MKEKQLLPEPKTDELL 421
M+EK P P T LL
Sbjct: 864 LIDIMEEKGCQPNPLTYSLL 883
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L+LF++M G D +Y A+I + +++A L+ M+E+G++P+ YNSL+
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYH-----------------AFLDIIRTG---- 326
CK EA + D M++ G+ P + +Y F ++ G
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 327 -----------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+E L++ M + GCQP TY +LI+ R
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNIIGSSREA 192
+ + + L++ C+ + +++A+ L+ K+ + P + +N +L+ C + G EA
Sbjct: 734 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP-SEDIYNSLLDCCCKL-GVYAEA 791
Query: 193 ERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
R+ M + G+ + S+ ++ Y + N K +F + G D + +I
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSN-EKAKAVFHGLLSCGYNYDEVAWKVLID 850
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L K LV + L+ MEEKG PN +TY+ LI+ L
Sbjct: 851 GLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 68/419 (16%)
Query: 19 RNKIEECGIKVSSELVSEVLSWV-RN---DWEA-----AFTFFLWAGKQSGYAHSTREYH 69
++ ++E ++VS LV EVL + RN D +A A+ FFLW+G+Q + H+ YH
Sbjct: 94 KSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYH 153
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAF 126
++ I + ++ W L+DEM + P+ T +T +LI C+ + G +A+ F
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMV-QDGFPT--TARTFNLLI---CSCGEAGLAKQAVVQF 207
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
K F + PF S+N ILN +
Sbjct: 208 MKSKTFNYR---------------------------------PFK-HSYNAILNSLLG-V 232
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+ E V+ +M + G DV++++ ++ + + + RLFD+M R G D Y
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++H L KG A++ + M+E G+ P+V+ Y +LI L +A L+ + DEM++
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK 352
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWR 359
G P + Y ++ TG V G L+ ++M G P TY +I+
Sbjct: 353 AGCRPDVVCY----TVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK----QLLPE 414
+F + E+ G P+ Y+ L+ L GKL EA + EM +K L+P+
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPK 467
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
S E++ V +Y+ L+K + + + DEM+Q G T RT++ L I GE
Sbjct: 139 SGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN--LLICSCGE 196
Query: 328 E------VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
V ++S + +P +Y ++ +Q+ + V+ ++ E+G PD
Sbjct: 197 AGLAKQAVVQFMKS-KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVL 255
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+Y L+ + GK++ + + EM P+ T +L
Sbjct: 256 TYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 14/395 (3%)
Query: 35 SEVLSWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
S++L +R D +A + F WA Q Y+ +H ++ L + FD+ L+ +M
Sbjct: 60 SQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMH 119
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALCR 150
+ V + T LI + Y H + IN + FAV + + LS L +
Sbjct: 120 SSKIP---VDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVK 176
Query: 151 YKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
++ E L D P + +FNI++ C R A + +M G+ D
Sbjct: 177 ANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK-AHQLRPAILMLEDMPNYGLRPDEK 235
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ ++ + + ++ LR+ + M G E N +++ L K +++A+ +
Sbjct: 236 TFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--Y 293
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
EE+G P+ VT+N+L+ LC+ + + + D ML++G + TY++ + + + GE
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E +L M C+P TY LI + ++ ++ G PD ++ +L
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
I L L E A + + EMKEK P+ T +L
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 11/290 (3%)
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC--NIIGSS 189
F + + + L+S LC+ + +A ++ ++D P NT ++N ++ C N + ++
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEP-NTVTYNTLIGTLCKENHVEAA 391
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
E RV ++ +G+ DV +F+ +I N + LF++MK G + D Y+ +
Sbjct: 392 TELARV---LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I +L R +K+A+ L+K ME G A NVV YN+LI LCK ++ +A FD+M G+
Sbjct: 449 IESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGV 508
Query: 310 SPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
S + TY+ ++ + + EE L++ M G +P TY ++K F +
Sbjct: 509 SRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAAD 568
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ NG PD +Y LI L G+++ A + ++ K ++ P+
Sbjct: 569 IVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 14/363 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FL + TR Y+ +++L K K L +M P + T ILI
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDV---STFNILI 206
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---EHLMFCNKDV 167
R C H + AI + + F L+ +V+ A + LM +
Sbjct: 207 RALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV--ESG 264
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ S N+++NG C G EA R E + G C D V+F+ +++ + ++ +
Sbjct: 265 CELTSVSVNVLVNGLCKE-GRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQG 321
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L + D M G E D YN++I L K + +A+ ++ M + PN VTYN+LI
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPT 344
LCK ++ A + + +G+ P + T+++ + + E L E M++ GC P
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +LI+ R+ + E+ +G + Y LI L N ++ +A +
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501
Query: 405 EMK 407
+M+
Sbjct: 502 QME 504
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 161/396 (40%), Gaps = 77/396 (19%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y+++I+ L K+ + D A ++ M + P+ VT TL I C +
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL---IGTLCKEN 386
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF- 170
V A + F L+ LC N + A L C+ D F +
Sbjct: 387 HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446
Query: 171 -----------------------------NTKSFNIILNGWC--NIIGSSREAERVWMEM 199
N +N +++G C N +G +AE ++ +M
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG---DAEDIFDQM 503
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
G+ V+++ +I+ K++ + + +L DQM G++ D+ Y ++ + +
Sbjct: 504 EMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDI 563
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K A ++++M G P++VTY +LI LCKA ++D A +
Sbjct: 564 KRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK-------------------- 603
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
LL S++ G T Y +I+ + ++ +++ E+ E G+ PD
Sbjct: 604 ------------LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651
Query: 380 RSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPE 414
+Y + L G ++EA + +EM EK +LPE
Sbjct: 652 VITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 112/288 (38%), Gaps = 39/288 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G Y +I L R+ A L+ EM ++V TL I C
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL---IDGLCKN 490
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+ VG A + F + + + L++ LC+ K V++A LM D F +
Sbjct: 491 NRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550
Query: 171 NT--KSF--------------NIILNG-------WCNIIGSSREAERVWM------EMSQ 201
T K F N+ LNG + +IG +A RV + +
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQM 610
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR-LVK 260
+G+ +++ +I K + + +RLF +M G D Y V L G ++
Sbjct: 611 KGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQ 670
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+A+ M EKG+ P ++ L + LC D Q + ++++G
Sbjct: 671 EAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ + +NI+LNGW + E++W M G+ VV++ I Y R + + L
Sbjct: 183 DVRVYNILLNGWSRARRLDK-VEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRRPDQAMTL 241
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
DQM+ GI+ + N +++ALA+ DA +++ GV+PN+ T+NSL+ CK
Sbjct: 242 LDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGYCK 301
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
L A ML RGISPT RTY+ F + R+ E L M G P T
Sbjct: 302 HGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNLYVKMVSNGYAPDQFT 361
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LIK + ++ E+ NG PD+++ T LIH L EEA + +M
Sbjct: 362 YHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLCRRHHFEEAFAEFEQMF 421
Query: 408 EKQLLPE 414
E+ ++P+
Sbjct: 422 ERGIVPQ 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 11/286 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G+A R Y+ ++ + R+ D L MR P++VT T I YC +
Sbjct: 176 EDGGWAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTF---IDAYCVM 232
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+A+ + + ++ AL + DA ++ F V P N +
Sbjct: 233 RRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVSP-NIST 291
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN ++ G+C G A V M RGI +++ +S+ R++ + L+ +M
Sbjct: 292 FNSLVFGYCKH-GDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNLYVKM 350
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G D+ Y+ +I L + ++ + +++ M G P+ T LI LC+
Sbjct: 351 VSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLCRRHHF 410
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
+EA F++M +RGI P TY + ++ GL++ ++K+
Sbjct: 411 EEAFAEFEQMFERGIVPQYITYRMLMKELKR----LGLVKLVQKLA 452
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 7/362 (1%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A +S ++ YH ++ LG+ + FD + +MR L L +++ +
Sbjct: 100 AAIESALSNVAVXYHVIVKALGRRKFFDFMMDALCDMRRNAIDGDLFM---LSVVVDSFV 156
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
V RAI F E LL LCR +V A ++ K F+ +
Sbjct: 157 RAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGT 216
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N + GW G E ERV EM G+ D +F +I + + + + + M
Sbjct: 217 YNAVAGGWSRF-GRVSEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGM 275
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K M + D + YNAVI ++ I M PN+ TY +I +ARK+
Sbjct: 276 KEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKV 335
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLL--ESMRKMGCQPTNDTYIML 351
+A FDEML+RG+ P+ T F+ + G L+ + RK+GC + + Y +L
Sbjct: 336 ADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKIL 395
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + S + G + +W E+ E G D Y +I L G+LE A E K
Sbjct: 396 LMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGF 455
Query: 412 LP 413
P
Sbjct: 456 CP 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M + I D+ S ++ + +A ++ + +++F + +G+ D + N ++ L +
Sbjct: 135 DMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRS 194
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V A S++ SM+ K V +V TYN++ + ++ E + EM G+ P RT+
Sbjct: 195 HVGAANSVLNSMKGK-VDFDVGTYNAVAGGWSRFGRVSEVERVMREMEADGLRPDCRTFG 253
Query: 318 AFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ + R G +E +L M++M CQP +TY +I F F K +N + +
Sbjct: 254 FLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSD 313
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y +I+ K+ +A + EM + ++P T
Sbjct: 314 NCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGT 356
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 101/245 (41%), Gaps = 9/245 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G R + +I LG+ + D A ++ M+ P +T +I + +V D
Sbjct: 244 GLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPD---TETYNAVIFNFVSVGDF 300
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFN 176
I + ++ + +++ R + V DA LMF + V P +T +
Sbjct: 301 EECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADA-LLMFDEMLRRGVVP-STGTIT 358
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ C+ G A ++ + + G + ++ ++ S +L ++++M+
Sbjct: 359 TFIKRLCSY-GPPYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQE 417
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D +VY +I L +++A+ +M+ KG P+ + Y+ L L + K +
Sbjct: 418 CGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSER 477
Query: 297 ARQAF 301
A + F
Sbjct: 478 AYKLF 482
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 57/126 (45%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM +RG+ + + I + L ++ + +++G + Y ++
Sbjct: 337 DALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILL 396
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L+ +S+ + M+E G + ++ Y +I LC +L+ A +E L++G
Sbjct: 397 MRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFC 456
Query: 311 PTIRTY 316
P+ Y
Sbjct: 457 PSRLVY 462
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 5/254 (1%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+FC + +NT S+NII+ C + G +EA R+ M+M R DVVS+S +I Y
Sbjct: 248 VFCEYGI-SWNTTSYNIIIYSLCRL-GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
L K L+L D M+ G++ +R YN++I L K +A +++ M + + P+ V
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMR 337
Y +LI K + A + FDEML + ISP TY + G +V L M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G +P TY LI + + + N F + NE+ + G P+ +Y ALI L +G+L+
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 398 EAHQYYMEMKEKQL 411
A++ EM++K L
Sbjct: 486 TANELLDEMRKKGL 499
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 180/405 (44%), Gaps = 45/405 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I +L K+ K A ++ EM + P V TL I + + V A F
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL---IHGFFKLGHVRTANKWFD 387
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + + L+ + V + ++L ++ + P + ++ +++ +C
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-DEVTYTTLIDVYCKA 446
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A + EM Q G+ ++V++ +I K L L D+M++ G++ + +
Sbjct: 447 -GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++++ + K ++ AI LMK ME G+ P+ +TY ++I C+ +D+A + EML
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 306 QRGISPTIRTYHAFLD------IIRTGEEVFG---------------------------- 331
RG+ PT+ T++ ++ ++ G+ + G
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 332 ----LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + MR G P ++TY +LIK + R + ++ E+ E G P +SY ALI
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+ K+ EA + + EM+ L+ + + D Y + VE
Sbjct: 686 KRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y +I L K + DTA L+DEMR ++ ++ + C
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM---VNGICKAG 517
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ +AI + + ++ A CR ++ A L+ ++ + P +F
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP-TVVTF 576
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C ++G + +R+ M ++GI D ++++ ++ + +++ +++ +M+
Sbjct: 577 NVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L K M EKG P V +YN+LIK K +K+
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKIL 695
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F+EM G+ Y+ F+D+
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDM 722
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-MK 267
++F + +L + +L D++ G+ NA + +A + I + +K
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN---SEGIEMAIK 247
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
E G++ N +YN +I LC+ K+ EA + +M R +P + +Y +D G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E + L++ M+ G +P TY +I + + KV E+ PD YT
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQ 434
LIH F G + A++++ EM K++ P+ T L+Q + + +E Q
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGL-L 333
PN + ++ + L + L EAR+ D++L G+ T+ + +AFL I E + +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ + G +Y ++I R + ++ ++ + PD SY+ +I
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKT 417
G+L++A + +M+ K L P T
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYT 330
>gi|255544107|ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548127|gb|EEF49619.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1128
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 186/398 (46%), Gaps = 18/398 (4%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
+V+ +LVSEVL V ND A FF WAGKQ GY H+ Y+ L + F A L
Sbjct: 558 RVTPDLVSEVLK-VENDPHLASQFFHWAGKQKGYRHNFASYNAYAYCLNRSSFFRAADQL 616
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIEDF--QGL 144
+ M P T++ ILIR + D R + ++ Y++ K F V F +
Sbjct: 617 PELMDSQGKPP---TEKQFEILIRMHS---DANRGLRVYHVYQKMKKFGVKPRAFLYNRI 670
Query: 145 LSALCRYKNVQDAEHLMFCN--KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ AL + ++ D +++ + D ++ ++ I++ G C G E VW EM +
Sbjct: 671 MDALIKTAHL-DLALVVYDDFKSDGLVEDSVTYMILIKGLCKF-GRIDEMMEVWEEMKRD 728
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ DV++++ +++ K + + LF +MK + DR +Y +I A K + A
Sbjct: 729 GVNPDVMAYATVVTGLCKGGRVAEGYELFKEMKENKVLIDRAIYGVLIEAFVKDGKIGSA 788
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-- 320
L++ + + G ++ YNSLI+ LC +++D+AR+ F M+Q G+ +T + L
Sbjct: 789 CDLLQGLVDSGYRADLGIYNSLIEGLCNVKRVDKARKLFQIMVQEGLELDFKTVNPMLVS 848
Query: 321 -DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
++ +E LL M ++G +D + R +V+ E+ G
Sbjct: 849 YAEMKRMDEFCKLLVQMERLGFSVMDDISKLFSFLVRREEIITLALEVFEELKVKGY-IS 907
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
Y L+ AL G++ +A + EMK+ P+ T
Sbjct: 908 VLIYNTLMEALLKVGEVRKALSLFSEMKDLNCEPDSNT 945
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 156/400 (39%), Gaps = 43/400 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y +I L K + D + +EM+ P ++ T++ + C
Sbjct: 691 KSDGLVEDSVTYMILIKGLCKFGRIDEMMEVWEEMKRDGVNPDVMAYATVVTGL---CKG 747
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
V F K K + + L+ A + + A L+ D + + +
Sbjct: 748 GRVAEGYELFKEMKENKVLIDRAIYGVLIEAFVKDGKIGSACDLLQGLVDSGYRADLGIY 807
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++ G CN+ + A +++ M Q G+ D + + ++ Y++ + + + +L QM+
Sbjct: 808 NSLIEGLCNVKRVDK-ARKLFQIMVQEGLELDFKTVNPMLVSYAEMKRMDEFCKLLVQME 866
Query: 236 RMGIECDRKV----------------------------------YNAVIHALAKGRLVKD 261
R+G + YN ++ AL K V+
Sbjct: 867 RLGFSVMDDISKLFSFLVRREEIITLALEVFEELKVKGYISVLIYNTLMEALLKVGEVRK 926
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----H 317
A+SL M++ P+ TY+ + + + EA +++++ P++ Y
Sbjct: 927 ALSLFSEMKDLNCEPDSNTYSIAVICFVEDGNIQEACVCHNKIIEMSSVPSVAAYCSLTK 986
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
DI E + + + + + P Y + + R V +V NE+
Sbjct: 987 GLCDIGEIDEAMMLVRDCLGNVTSGPMEFKYTLTVLHVCRSGDAEKVIEVLNEMMHENCP 1046
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +A+I + +G LEEA + + ++E++LL E KT
Sbjct: 1047 PNEVILSAIISGMCKHGTLEEARKVFTNLRERKLLTEAKT 1086
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
V+H G K I ++ M + PN V +++I +CK L+EAR+ F + +R
Sbjct: 1020 TVLHVCRSGDAEK-VIEVLNEMMHENCPPNEVILSAIISGMCKHGTLEEARKVFTNLRER 1078
Query: 308 GISPTIRT--YHAFL---------DIIRTGEEVFGLLESMRKMGC 341
+ +T Y L D++ +G + FGL +R GC
Sbjct: 1079 KLLTEAKTIFYDERLIEHMKKKTADLVVSGLKFFGLESKLRAKGC 1123
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 18/363 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + Y ++ LGK R + L+ EM P++ T I IR +
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV---YTFTICIRV------L 272
Query: 120 GRAINAFYAYKRFK------FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
GRA AY+ F+ + + L+ ALC +++A+ L K +
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I L N G + W +M G DVV+F+ ++ KAR+ + FD
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M++ GI + YN +I L + ++DA+ L+ +ME GV P TYN I K+ +
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+A + F++M +GI P I +A L + G E + +R+ G P + TY M
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++K +S+ Q + +E+ NG PD +LI +L+ G+++EA Q + MK+ +
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 411 LLP 413
L P
Sbjct: 573 LSP 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 10/300 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G A ++ ++A+ GK K + L EM P +T I+I
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN---IVISSLAKS 871
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+++ +A++ FY F + L+ L + +++A L + P N
Sbjct: 872 NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAI 930
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FNI++NG+ I G + A +++ M GI D+ S++ ++ C A + + L F+++
Sbjct: 931 FNILINGYGKI-GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K G++ D YN +I+ L K + +++A++L M +G+ P++ TYNSL+ L A +
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
++A++ ++E+ G+ P + TY+A + + E + + ++M GC P TY L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 173/370 (46%), Gaps = 25/370 (6%)
Query: 43 NDWEAAFTFF-LWAGKQS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
ND+ TF W+ ++ GY + ++ +L K R FD A+A D MR P+L
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY--------K 152
T TL+ C + GR +A + +VG++ + Y K
Sbjct: 403 HTYNTLI------CGLLRAGRIEDALKLLGTME-SVGVQPTAYTYNIFIDYFGKSGETGK 455
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
V+ E + K + P N + N L + G REA+ ++ + + G+ D V+++
Sbjct: 456 AVETFEKMK--AKGIVP-NIVACNASLYSLAEM-GRLREAKTMFNGLRENGLAPDSVTYN 511
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ CYSK + + + L +M R G E D V N++I +L K V +A + M++
Sbjct: 512 MMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV--- 329
++P VVTYN+L+ L K ++ +A + F+ M+++ SP +++ LD +EV
Sbjct: 572 KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELA 631
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ M M C+P TY +I + + + F ++++ ++ + PD + L+
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH-PDHVTICTLLPG 690
Query: 390 LFLNGKLEEA 399
L G++ +A
Sbjct: 691 LVKCGQIGDA 700
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
GI + S++C+I + K LF MK +G D +N ++ K + +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
L K M + P+ +TYN +I L K+ LD+A F +++ PT RTY +D
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ + G EE L E M GC+P + +LI + + +++ + G PD
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
SYT L+ L L G+++EA Y+ E+K L P+
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 6/308 (1%)
Query: 115 AVHDVGRAINAFYAYKRFKFAV-GIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNT 172
++ D RA++ FY+ F + E +L L + V+D A F K + +
Sbjct: 98 SMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDL 157
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ I +I G R+ V +M + G + S++ +I ++ + L ++
Sbjct: 158 DTYLTIFKAL-SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G++ K Y+A++ AL K R + + L+K ME+ G+ PNV T+ I+ L +A
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYI 349
K+DEA + F M G P + TY +D + E L M+ G +P YI
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ KF+ + + W+++ +G PD ++T L+ L +EA + M+++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 410 QLLPEPKT 417
+LP T
Sbjct: 397 GILPNLHT 404
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 47/365 (12%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A+ F K+ G + + Y+ +I L +V + AW L +M+ P T LL
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 108 ILIRRYCAVHD-VGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMF- 162
AVH G+ F YK + + ++S+L + N+ A +
Sbjct: 831 -------AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 163 -CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+ D P +++ +++G + G EA R++ EMS G + F+ +I+ Y K
Sbjct: 884 LVSSDFRP-TPRTYGPLIDGLAKV-GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +LF +M GI D K Y ++ L V +A+ ++ G+ P+ + Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGC 341
N +I L K+++++EA ++EM RGI P + TY++ + + G + G++E ++M
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM--LNLG--LAGMVEQAKRM-- 1055
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ E+ G PD +Y ALI L+ E A+
Sbjct: 1056 --------------------------YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089
Query: 402 YYMEM 406
Y M
Sbjct: 1090 VYKNM 1094
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 22/269 (8%)
Query: 168 FPFNTKSFN-----IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
F N S+N +I +G+C EA V+ M G+ + ++S ++ K R
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCG------EALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ V+ L +M+ +G+ + + I L + + +A + + M+++G P++VTY
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM--- 339
LI LC A +L+ A++ F +M G P Y LD FG L++ ++
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND----FGDLDTFKEFWSQ 357
Query: 340 ----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
G P T+ +L+ + R F F ++ + + G P+ +Y LI L G+
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+E+A + M+ + P T + D+
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDY 446
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 23/338 (6%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHL- 160
L+ L+R C H R + A+ + +F +GI + L+ L + A L
Sbjct: 755 LIPLVRVLCK-HK--RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLF 811
Query: 161 -----MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ C D F FN +L G E ++ EM R D ++++ +I
Sbjct: 812 KDMKNVGCAPDAFTFN------MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
S +K+ NL K L F + + Y +I LAK +++A+ L + M + G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGL 332
PN +N LI K + A Q F M+ GI P +++Y +D + +E
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
++ G P Y +I + ++ ++NE+ G PD +Y +L+ L L
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQ 429
G +E+A + Y E++ L P+ T + L++ +S ++
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN 1083
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 60/409 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G A + Y+ M+ KV + D A L+ EM P ++ +L+ ++
Sbjct: 499 RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID------SL 552
Query: 117 HDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
+ GR A+ + R K + + + LLS L + VQ A L K P N
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP-N 611
Query: 172 TKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
T SFN +L+ +C + E E +++ +M+ DV++++ +I K ++
Sbjct: 612 TISFNTLLDCFC----KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM------------------- 269
F Q+K+ + D ++ L K + DAIS+ +
Sbjct: 668 WFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726
Query: 270 -------------EEKGVAPNVVTYNSLIKPL----CKARKLDEARQAFDEMLQR-GISP 311
E+ V + +S + PL CK ++ A Q FD+ ++ GISP
Sbjct: 727 TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786
Query: 312 TIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
T+ +Y+ + + E+ + L + M+ +GC P T+ ML+ + + +F+++
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ PD +Y +I +L + L++A ++ ++ P P+T
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++ I D+ ++ I S L ++ + ++M++ G + YN +IH L +
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A+ + + M +G+ P++ TY++L+ L K R + EM G+ P + T+
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267
Query: 319 FLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ ++ R G +E + + M GC P TY +LI Q N +++ ++ NG
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ PD+ Y L+ G L+ +++ +M+ +P+ T +L D
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 5/254 (1%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+FC + +NT S+NII+ C + G +EA R+ M+M R DVVS+S +I Y
Sbjct: 248 VFCEYGI-SWNTTSYNIIIYSLCRL-GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
L K L+L D M+ G++ +R YN++I L K +A +++ M + + P+ V
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMR 337
Y +LI K + A + FDEML + ISP TY + G +V L M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G +P TY LI + + + N F + NE+ + G P+ +Y ALI L +G+L+
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 398 EAHQYYMEMKEKQL 411
A++ EM++K L
Sbjct: 486 TANELLDEMRKKGL 499
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 179/405 (44%), Gaps = 45/405 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I +L K+ K A ++ EM + P V TL I + + V A F
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL---IHGFFKLGHVRTANKWFD 387
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
K + + L+ + V + ++L ++ + P + ++ +++ +C
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-DEVTYTTLIDVYCKA 446
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A + EM Q G+ ++V++ +I K L L D+M++ G++ + +
Sbjct: 447 -GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++++ + K ++ AI LMK ME G+ P+ +TY ++I C+ +D+A + EML
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 306 QRGISPTIRTYHAFLD------IIRTGEEVFG---------------------------- 331
RG+ PT+ T++ ++ ++ G+ + G
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 332 ----LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + MR G P ++TY +LIK + R + ++ E+ E G P +SY ALI
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+ K EA + + EM+ L+ + + D Y + VE
Sbjct: 686 KRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 14/354 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I G+ K L EM P VT TL I YC G +NAF
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL---IDVYCKA---GEMVNAFS 454
Query: 128 AYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWC 183
+ + I + L+ LC++ + A L+ K N +N ++NG C
Sbjct: 455 LHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G+ +A ++ EM GI D ++++ +I Y + ++ K +L +M G++
Sbjct: 515 KA-GNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N +++ +++D L+ M EKG+ P+ +TYN+L+K C ++ + +
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 304 MLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +G++P TY+ + R +E + L + M + G PT +Y LIK+F + R+
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F +++ E+ +G D Y + + G +E E EK LL E
Sbjct: 694 FXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNE 747
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y +I L K + DTA L+DEMR ++ ++ + C
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM---VNGICKAG 517
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ +AI + + ++ A CR ++ A L+ ++ + P +F
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP-TVVTF 576
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C ++G + +R+ M ++GI D ++++ ++ + +++ +++ +M+
Sbjct: 577 NVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L K M EKG P V +YN+LIK K RK
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFX 695
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F+EM G+ Y+ F+D+
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDM 722
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-MK 267
++F + +L + +L D++ G+ NA + +A + I + +K
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN---SEGIEMAIK 247
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
E G++ N +YN +I LC+ K+ EA + +M R +P + +Y +D G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E + L++ M+ G +P TY +I + + KV E+ PD YT
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQ 434
LIH F G + A++++ EM K++ P+ T L+Q + + +E Q
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLL 333
PN + ++ + L + L EAR+ D++L G+ T+ + +AFL I E + +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ + G +Y ++I R + ++ ++ + PD SY+ +I
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKT 417
G+L++A + +M+ K L P T
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYT 330
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 153/323 (47%), Gaps = 16/323 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
T L+ +C D +A+ F I + L+ LC+ + A LM
Sbjct: 437 TYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEM 496
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C D++ ++N+I+NG C + G +A + + +G D+ +++ ++ Y
Sbjct: 497 AEKGCKPDIW-----TYNLIINGLCKM-GCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ L + L ++M G+ D YN +++ L K ++ + + K+M EKG APN+
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLES 335
+TYN++I+ LC ++K++EA EM +G++P + ++ + + G + +GL
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670
Query: 336 MRKM-GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K T TY ++I FS ++++E+ +NG PD +Y LI G
Sbjct: 671 MEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT 417
+ + +++ +E EK +P T
Sbjct: 731 NVNQGYKFLLENIEKGFIPSLTT 753
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 19/343 (5%)
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
D A A+ + G PS++ TL I+ C + A+ I +
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTL---IKGLCQQGLILPALQLMNEMAEKGCKPDIWTY 508
Query: 142 QGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+++ LC+ + DA HL+ C D+F +NT +++G+C + E V
Sbjct: 509 NLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT-----LVDGYCRQLKLDSAIELV 563
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
SQ G+ DV++++ +++ K +V+ +F M G + YN +I +L
Sbjct: 564 NRMWSQ-GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-LQRGISPTIR 314
+ V +A+ L+ M+ KG+ P+VV++ +LI CK LD A F M Q +S T
Sbjct: 623 SKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTA 682
Query: 315 TYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ + + L M+K GC P N TY +LI F + +K E
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
E G P +++ +++ L + K++EA M +K ++P+
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 7/315 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T I I+ C + RA+ R + + ++ LCR V +AE +
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
N P N ++N I++G+C G +A R+ + +G D ++ +++ + +
Sbjct: 392 VNGGFEP-NDFTYNSIIDGYCKK-GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG 449
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + + +F G+ VYN +I L + L+ A+ LM M EKG P++ TYN
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM--- 339
+I LCK L +A + + +G P I TY+ +D ++ +E + +M
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P TY L+ + + V +++ ++E G P+ +Y +I +L + K+ EA
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 400 HQYYMEMKEKQLLPE 414
EMK K L P+
Sbjct: 630 VDLLGEMKSKGLTPD 644
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 7/360 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ H+ Y +M+ LG KF+ L+ EMR L + + +R Y
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLL--EGVYVEAMRFYGRKG 169
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
+ A++ F F + + +++ L + A + KD + ++
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYT 229
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I + +C G A R+ M G + V++ +++ + + + + LFD+M
Sbjct: 230 IRIKSFCRT-GRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ D +N ++HAL K V ++ L + ++GV PN+ T+N I+ LCK LD
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIK 353
A + + + G+ P + TY+ + + V E + KM G +P + TY +I
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + ++ + G PD +Y +L++ +G ++A + + K L P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 5/263 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ +FN +++ C G E+ER++ ++ +RG+C ++ +F+ I K +L + +RL
Sbjct: 294 DVTTFNKLVHALCKK-GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ R G+ D YN VI L + V +A + M G PN TYNS+I CK
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ +A + + + +G P TY + ++ + G+ + + + G +P+
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LIK + ++ NE++E G PD +Y +I+ L G L +A+ +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532
Query: 408 EKQLLPEPKTDELLQDWSYNKQF 430
K +P+ T L D Y +Q
Sbjct: 533 TKGCIPDIFTYNTLVD-GYCRQL 554
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 20/267 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ + K D+A L++ M P ++T TLL C + F
Sbjct: 543 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL---NGLCKTAKSEEVMEIFK 599
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A A I + ++ +LC K V +A L+ +K + P + SF ++ G+C +
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP-DVVSFGTLITGFCKV 658
Query: 186 IGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G A ++ M Q + + +++ IIS +S+ N+ LRLF +MK+ G + D
Sbjct: 659 -GDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNY 717
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I K V + EKG P++ T+ ++ LC K+ EA M
Sbjct: 718 TYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLM 777
Query: 305 LQRGISP-TIR-----------TYHAF 319
+Q+ I P T+ TYHA+
Sbjct: 778 VQKDIVPDTVNTIFEADKKGHITYHAY 804
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 37/225 (16%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A + G A + Y+T+I L +K + A L+ EM+ P +V+ T LI +C
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGT---LITGFC 656
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
V D+ A F ++ +Y D H T +
Sbjct: 657 KVGDLDGAYGLFRGMEK------------------QY----DVSH-----------TTAT 683
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NII++ + + + + A R++ EM + G D ++ +I + K N+++ + +
Sbjct: 684 YNIIISAFSEQL-NMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
G + V++ L V++A+ ++ M +K + P+ V
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D + A+ F KQ +H+T Y+ +I+ + A L EM+ P
Sbjct: 660 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPD---N 716
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HL 160
T +LI +C +V + F + F +L+ LC VQ+A HL
Sbjct: 717 YTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHL 776
Query: 161 MFCNKDVFP 169
M KD+ P
Sbjct: 777 MV-QKDIVP 784
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 180/381 (47%), Gaps = 20/381 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y+ +I K F+ A L EM G P++VT T++ + R V D
Sbjct: 272 GLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDA 331
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC---NKDVFPFNTKSFN 176
R ++ V + L+ R N +A L+F +K++ P + ++N
Sbjct: 332 RRYLDVMVNEDLMPDLVS---YNTLIYGYSRLGNFAEA-LLLFSELRSKNLVP-SVVTYN 386
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G C G+ A+ + +M + G+C DVV+F+ ++ + + NL LFD+M
Sbjct: 387 TLIDGGCRT-GNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445
Query: 237 MGIECDRKVYNA-VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y ++ L G K A + + M+ +G P+++TYN LI LCK D
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSK-AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 296 EARQAFDEMLQRGISPTIRTY----HAFL--DIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+A + +M GI P TY HA L ++R EEVF M K G P+ TY
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS---DMLKKGIHPSVVTYT 561
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI ++ + K ++E+ + G P+ +Y ALI+ L ++ A+ + EM+ K
Sbjct: 562 VLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESK 621
Query: 410 QLLPEPKTDELLQDWSYNKQF 430
+ P T +L + + N Q+
Sbjct: 622 GVSPNKYTYTILINENSNLQY 642
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++TM+ K + A ++D MR P+ V+ +L+ + RA
Sbjct: 210 FNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYN---VLVNGLSGKGEFDRAKELIE 266
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
V + L+ C+ + ++A L + P ++N I+ C +
Sbjct: 267 QMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP-TVVTYNTIMYSLCRL 325
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G +A R M + D+VS++ +I YS+ N + L LF +++ +
Sbjct: 326 -GRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I + + A + M + G+ P+VVT+ L++ C+ L A++ FDEML
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444
Query: 306 QRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG+ P Y + ++ G + FG+ E M+ G P TY +LI + F
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++ ++ G PD +YT++IHA ++G L +A + + +M +K + P T +L
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVL 563
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 10/334 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I ++ F A L E+R PS+VT TL I C ++ A
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL---IDGGCRTGNLDIAKGMKD 406
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + F L+ C+ N+ A+ L ++ + P + ++ + G +
Sbjct: 407 DMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKP-DCIAYTTRIVGELKL 465
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ +A + EM G D+++++ +I+ K N L +M+ GI D
Sbjct: 466 -GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++IHA L++ A + M +KG+ P+VVTY LI +LD A++ FDEM
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ 584
Query: 306 QRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G+SP + TY+A + + + + L M G P TY +LI + S + +
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQ 644
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ K++ ++ + PD +++AL+ L + KL
Sbjct: 645 DALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 167/402 (41%), Gaps = 21/402 (5%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW------ 85
E + VL+ V++ A FF W KQ + S + ++ IL K A+
Sbjct: 52 EFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKA 111
Query: 86 -------ALIDEMRGGETG-PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
++D + G G S V+ + L +LI+ + + + + FY
Sbjct: 112 IEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPD 171
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + +L L V + E + + + P +FN +++ C G A V
Sbjct: 172 VRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRP-TIVTFNTMMDSRCKE-GEVGRAVEV 229
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
M G + VS++ +++ S + L +QM +G++ YN +I K
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCK 289
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ ++A L + M +G P VVTYN+++ LC+ ++ +AR+ D M+ + P + +
Sbjct: 290 KEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVS 349
Query: 316 YHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ + R G E L +R P+ TY LI R + +++
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI 409
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++G PD ++T L+ G L A + + EM + L P+
Sbjct: 410 KHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPD 451
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 171/382 (44%), Gaps = 12/382 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G AHS MI + RK A++ + ++ P V TLL C V
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL---NGLCLECRV 174
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFN 176
A+ + L++ LC V DA L+ ++ V F N ++
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI--DRMVETGFQPNEVTYG 232
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+LN C G + A + +M +R I D V +S II K +L LF++M+
Sbjct: 233 PVLNVMCKS-GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D YN +I D L++ M ++ ++PNVVT++ LI K KL E
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A Q EM+QRGI+P TY++ +D EE +++ M GC P T+ +LI
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + + +++ E+S G + +Y L+ +GKLE A + + EM +++ P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 414 EPKTDELLQDWSYNKQFVERQI 435
+ + ++L D + +E+ +
Sbjct: 472 DIVSYKILLDGLCDNGELEKAL 493
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 20/378 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C + A N F + F I + L+ C D L+ +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N +F+++++ + G REA+++ EM QRGI + ++++ +I + K L
Sbjct: 328 KISP-NVVTFSVLIDSFVKE-GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +++ D M G + D +N +I+ K + D + L + M +GV N VTYN+L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE-----EVFGLLESMRKM 339
+ C++ KL+ A++ F EM+ R + P I +Y LD + GE E+FG +E K
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE---KS 502
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ Y+++I + + + ++ + G D +Y +I L L +A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 400 HQYYMEMKEKQLLPEPKTDELL-------QDWSYNKQFVERQIASLKAHQPQSGQNTRVI 452
+ +M E+ P+ T +L D + + +E +S + + +
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Query: 453 SKKSDQDREFLQQPETRR 470
+ D+ FL T R
Sbjct: 623 LSSGELDKSFLDMLSTTR 640
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M +GI + + + S +I+C+ + R L ++ ++G E D ++N +++ L
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A+ L+ M E G P ++T N+L+ LC K+ +A D M++ G P TY
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 318 AFLDII-RTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+++ ++G+ LL M + + Y ++I + N F ++NE+
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
G D +Y LI G+ ++ + +M ++++ P T +L D S+ K+ R+
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID-SFVKEGKLRE 351
Query: 435 IASLKAHQPQSGQNTRVISKKS 456
L Q G I+ S
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNS 373
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 46/381 (12%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTREYHTMIAIL 75
E+ K+EE IK+ + S ++ + D F L+ + G+ Y+T+I
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVT-----------------KQTLLILIRRYCAVHD 118
++D L+ +M + P++VT Q L +++R A +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 119 V--GRAINAFYAYKRFKFAVGIED-------------FQGLLSALCRYKNVQDAEHLM-- 161
+ I+ F R + A+ + D F L++ C+ + D L
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+ V NT ++N ++ G+C G A++++ EM R + D+VS+ ++
Sbjct: 429 MSLRGVIA-NTVTYNTLVQGFCQS-GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
L K L +F ++++ +E D +Y +IH + V DA L S+ KGV + Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLES 335
N +I LC+ L +A F +M + G +P TY+ + D T E L+E
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE---LIEE 603
Query: 336 MRKMGCQPTNDTYIMLIKKFS 356
M+ G T M+I S
Sbjct: 604 MKSSGFPADVSTVKMVINMLS 624
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 7/272 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G A +T Y+++I K + + A ++D M P ++T ILI YC +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN---ILINGYCKAN 417
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ + F + L+ C+ ++ A+ L ++ V P + S+
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSY 476
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I+L+G C+ G +A ++ ++ + + D+ + II A + LF +
Sbjct: 477 KILLDGLCDN-GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D + YN +I L + + A L + M E+G AP+ +TYN LI+
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
A + +EM G + T ++++ +GE
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 3/222 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ +M Q V+ F+ + S +K + VL L QM+ GI + +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + R + A S M + + G P+ V +N+L+ LC ++ EA + D M++ G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 311 PTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT+ T + ++ + G+ + L++ M + G QP TY ++ + Q ++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++ E D Y+ +I L +G L+ A + EM+ K
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 186/373 (49%), Gaps = 15/373 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I L K K + A ++++M+ P++V+ TL I YC + G+ A
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL---IDGYCKLGGNGKMYKADA 282
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
K + + F L+ + N+ + + ++DV P N S+N ++NG
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP-NVISYNSLINGL 341
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
CN G EA + +M G+ ++++++ +I+ + K L + L +F +K G
Sbjct: 342 CNG-GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
++YN +I A K + D +L + ME +G+ P+V TYN LI LC+ ++ A++ FD
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G+ P + T+H ++ R GE + LL+ M KMG +P + TY +++K + +
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 360 QFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ ++ E + +SY L+ GKLE+A+ EM EK L+P T
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 419 ELLQDWSYNKQFV 431
E++++ ++ FV
Sbjct: 580 EIVKEEMVDQGFV 592
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 149/305 (48%), Gaps = 16/305 (5%)
Query: 121 RAINAFYAYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTK 173
R+ + Y YK R K + F +++ALC+ + A +M +D+ + N
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM---EDMKVYGCSPNVV 259
Query: 174 SFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N +++G+C + G+ + +A+ V EM + + ++ +F+ +I + K NL +++F
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M ++ + YN++I+ L G + +AIS+ M GV PN++TYN+LI CK
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTY 348
L EA F + +G PT R Y+ +D + G ++ F L E M + G P TY
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI R K++++++ G PD ++ L+ G+ +A EM +
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 409 KQLLP 413
L P
Sbjct: 499 MGLKP 503
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 187 GSSREAERVWMEMSQ-RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS + ++ +S +C + + ++ Y+ F + G +
Sbjct: 131 GSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALS 190
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++ AL K D + K M + + PNV T+N +I LCK K+++AR ++M
Sbjct: 191 CKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250
Query: 306 QRGISPTIRTYHAFLD----IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
G SP + +Y+ +D + G+ + +L+ M + P T+ +LI F +
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
KV+ E+ + P+ SY +LI+ L GK+ EA
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 62/306 (20%)
Query: 18 MRNKIEECGIKVSSELVSEVLS-WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
MR+K+ G++ + + +++ + +ND + K G +TR Y+ +I
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K+ K D +AL +EM R V DVG
Sbjct: 413 KLGKIDDGFALKEEM-------------------EREGIVPDVGT--------------- 438
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ L++ LCR N++ A+ L +K + T F+I++ G+C G SR+A
Sbjct: 439 ----YNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT--FHILMEGYCR-KGESRKAAM 491
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHAL 253
+ EMS+ G+ ++++ ++ Y K NL + QM K + + YN ++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
++ ++DA L+ M EKG+ PN +TY ++K +EM+ +G P I
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITY-EIVK---------------EEMVDQGFVPDI 595
Query: 314 RTYHAF 319
H F
Sbjct: 596 EG-HLF 600
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 174/354 (49%), Gaps = 10/354 (2%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
++++ L K K + W + D M + P + T + I +C V +V A
Sbjct: 184 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM---ISAHCKVGNVKDAKRVLLE 240
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNII 186
+ + + ++ LCR + + +A L +K + P + +++I++NG+C +
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVP-DLYTYDILINGFC-ME 298
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
SREA+ + +EM G+ + ++++ +I + + ++ + R+ D+M GIE + ++
Sbjct: 299 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 358
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +++ + K ++ A+ +M+ M EKGV P+ TY+ LI+ C+ + + A + DEM +
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418
Query: 307 RGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R ++PT+ TY ++ + R G + +L M G +P Y L+ ++ +
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 478
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + E G PD Y +LI ++EEA Y MEM E++L P T
Sbjct: 479 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 532
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 178/400 (44%), Gaps = 45/400 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA-- 115
+ G + + Y+ +I L + R D A L M P L T ILI +C
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYD---ILINGFCMEK 299
Query: 116 -----------VHDVG---------RAINAF---------YAYKRFKFAVGIED----FQ 142
+ DVG I+ F + K A GIE +
Sbjct: 300 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359
Query: 143 GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL+ +C+ ++ A +M K V P +++++++++ G C +R E + EM
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEP-DSQTYSLLIEGHCRGQNMARAFE-LLDEMK 417
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+R + V+++S II+ + NL + +M G++ + VY ++ A AK V+
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
++ +++ M E+G+ P+V YNSLI CKA++++EAR EML+R + P TY AF+
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Query: 321 D-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + GE M G P Y LI+ + F V+ I
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D +Y+ LIH L NGK+ EA + E++EK LLP T
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 146/298 (48%), Gaps = 9/298 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+S C+ NV A L+ C K + P + ++NI+++G C G A+ ++ +
Sbjct: 638 YNSLISGSCKQGNVDKASQLLEEMCIKGINP-DIVTYNILIDGLCKA-GEIERAKNLFDD 695
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ RG+ + V+++ ++ Y K++N +L ++M G+ D +YN +++ K
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 755
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ L + M EKG A + V++N+LI+ CK+ KL EA +EM+++ P TY +
Sbjct: 756 FEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 814
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + G E L M++ PT TY L+ + V ++ E+ G
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDWSYNKQFVE 432
PD+ +Y +I A G + EA + E+ K + + D L+Q ++F E
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFE 932
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
V P N + ++ G C G+ EA V+ + R + DV ++S +I S+ +H+
Sbjct: 561 VLP-NVGIYTALIEGHCKE-GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHE 618
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +++ G+ + YN++I K V A L++ M KG+ P++VTYN LI
Sbjct: 619 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 678
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LCKA +++ A+ FD++ RG++P TY A +D + F LLE M G P
Sbjct: 679 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 738
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
Y +++ + +F ++ E+ E G S+ LI +GKL+EA+
Sbjct: 739 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLL 797
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM EKQ +P T L D
Sbjct: 798 EEMIEKQFIPNHVTYTSLID 817
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
LI +C +V A + F + ++ + L+ L R + +A + K
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P N ++N +++G C G+ +A ++ EM +GI D+V+++ +I KA + +
Sbjct: 631 LLP-NAFTYNSLISGSCKQ-GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 688
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
LFD ++ G+ + Y A++ K + A L++ M +GV P+ YN ++
Sbjct: 689 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 748
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPT 344
CK K ++A F EML++G + T+ ++G +E LLE M + P
Sbjct: 749 FCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 808
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY LI + G ++W E+ E P +YT+L+H G + E +
Sbjct: 809 HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 868
Query: 405 EMKEKQLLPEPKTDELLQD 423
EM K + P+ T ++ D
Sbjct: 869 EMVAKGIEPDKMTYYVMID 887
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 14/383 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ A + Y +I L + A++ EM P+ V TL+ A
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT------AH 470
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNT 172
GR + +R + + D + L+ C+ K +++A +LM + N
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ ++G+ G A+R + EM G+ +V ++ +I + K N+ + +F
Sbjct: 531 HTYGAFIDGYSKA-GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ + D + Y+ +IH L++ + +A + ++EKG+ PN TYNSLI CK
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+D+A Q +EM +GI+P I TY+ +D + + G E L + + G P TY
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++ + + + F++ E+ G PD Y +++ K E+A + EM EK
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 769
Query: 410 QLLPEPKTDELLQDWSYNKQFVE 432
+ L++ + + + E
Sbjct: 770 GFASTVSFNTLIEGYCKSGKLQE 792
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++FD M + D Y +I A K VKDA ++ M EKG +PN+VTYN +I L
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPT 344
C+AR LDEA + M+ +G+ P + TY ++ R+ E LLE M +G +P
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE-MIDVGLKPE 319
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI F R F++ +E+ G + + L++ + GK+E+A +
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVER 433
EM EK + P+ +T LL + Q + R
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMAR 408
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 11/286 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y M+ K + A+ L++EM P +L C
Sbjct: 700 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC---CKEEKF 756
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A++ F FA + F L+ C+ +Q+A HL+ K P N ++
Sbjct: 757 EKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIP-NHVTYTS 814
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G EA+R+W+EM +R + +++ ++ Y N+ +V LF++M
Sbjct: 815 LIDHNCKA-GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAK 873
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GIE D+ Y +I A + V +A L + KG+ +V Y++LI+ LCK + E
Sbjct: 874 GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV 933
Query: 298 RQAFDEMLQRGIS---PTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
+ +E+ + G PT I +E +L SM K G
Sbjct: 934 LKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGEEV 329
P++++ NSL+ L K K++ + FD M + P + TY H + ++ + V
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
LLE M + GC P TY ++I R R ++ + + G PD +Y LI+
Sbjct: 238 --LLE-MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING 294
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + EA +EM + L PEP T L D
Sbjct: 295 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 328
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 188/399 (47%), Gaps = 34/399 (8%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F+ GK G ++Y T++++ ++ F A TL ILI
Sbjct: 86 FVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAH----------------NDYTLNILIN 129
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALCRYKNVQDAEHLM--FCNKDV 167
C + + A++ K FK + + F L++ LC +++A L +D
Sbjct: 130 SLCRLSHIHFAVSVLS--KMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P NT +F I+++ C G EA V+ M+++G+ ++ +++ +++ Y ++
Sbjct: 188 MP-NTVTFTILVDVLCKK-GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
++F+ M G Y+ +I+ K R + +A +L+ M EK + PN VTYN+L++
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
LC A L EA++ F +M G+ P +RTY LD + + G EE LL SM++ +P
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
Y +LI+ + ++++++ NG P +Y +I L G +EA++ +
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFR 425
Query: 405 EMKEKQLLPEPKTDELL-------QDWSYNKQFVERQIA 436
+M++ LP+ + ++ QD S Q ++ +
Sbjct: 426 KMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVG 464
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+A+ F + GK G A S Y +I K R+ D A AL+ +M E P+ VT T
Sbjct: 244 DASKVFEIMVGK--GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
L+ QGL C ++ +A+ L C
Sbjct: 302 LM----------------------------------QGL----CHASSLLEAQELFKKMC 323
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+ + P N ++++I+L+G C G EA ++ M +R + D+V ++ +I A
Sbjct: 324 SSGMLP-NLRTYSILLDGLCKH-GHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGK 381
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L LF ++ GI + YN +I L K L +A L + ME+ G P+ +YN
Sbjct: 382 LEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNV 441
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+I+ + + A Q DEM+ R S T+ LD+
Sbjct: 442 IIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 5/269 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + +S++I+++G G +RE ++ M QRG D +++ ++ + K+ + K
Sbjct: 55 FLPDVRSYSILIHGLTKA-GQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKA 113
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
++MK + Y ++I LAK + +A L + + KG+ NV+ Y+SLI
Sbjct: 114 YEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 173
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPT 344
K ++DEA +EM+++G++P + T+++ +D + EE+ L +SM++M C P
Sbjct: 174 FGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 233
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +LI R +++ F W E+ + G P+ +YT +I L G + +A +
Sbjct: 234 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFE 293
Query: 405 EMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
K +P+ + + L++ S+ + +E
Sbjct: 294 RFKANGGIPDAASFNALIEGMSHANRAIE 322
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 8/253 (3%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + +++ EM++RG D+ + + C KA ++ K +F+ +K G D + Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ +IH L K ++ S+ +M+++G A + YN+++ CK+ K+D+A +A +EM
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 307 RGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ + PT+ TY + +D I +E + L E + G + Y LI F + +
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + E+ + G P+ ++ +L+ AL ++ EA + MKE + P T +L +
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 242
Query: 424 W-----SYNKQFV 431
YNK FV
Sbjct: 243 GLCRVQKYNKAFV 255
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 44/326 (13%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A KQ G+A R Y+ ++ K K D A+ ++EM+ P++ T +++ + +
Sbjct: 84 AMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAK-- 141
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
+ R A+ ++ K + GIE N
Sbjct: 142 ----IDRLDEAYMLFEEAK-SKGIE------------------------------LNVIV 166
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G+ + G EA + EM ++G+ +V +++ ++ KA +++ L F M
Sbjct: 167 YSSLIDGFGKV-GRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSM 225
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K M + Y+ +I+ L + + A + M+++G+ PNVVTY ++I L K +
Sbjct: 226 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNI 285
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
+A F+ G P +++A ++ + E + + E R GC+ I L
Sbjct: 286 TDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISL 345
Query: 352 IKKFSRW---RQFGNVFKVWNEISEN 374
+ ++ Q V V EI+++
Sbjct: 346 LDALNKAECIEQAAVVGAVLREIAKS 371
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 14/369 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + + ++ GK R T L++EM P++ T + ++ R
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD------ 277
Query: 120 GRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
G+ A+ KR + + L+ ALC + + DA L K K
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ L + G + E++W EM G DVV+F+ +++ KA +++ L D M++
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + YN +I L + + DA+ L +ME GV P TY LI K+ +
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A + F++M RGI+P I +A L ++ R GE + ++ G P + TY M++
Sbjct: 458 ALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK-AMFNELKSSGLAPDSVTYNMMM 516
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K +S+ Q K+ +E+S+ PD +LI L+ G++EEA Q + M+E L
Sbjct: 517 KCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLA 576
Query: 413 PEPKTDELL 421
P T +L
Sbjct: 577 PTVVTYNIL 585
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 41/360 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GYA + ++ L K + + A+ L+D MR P+L T TL+ + R + D
Sbjct: 364 GYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDD- 422
Query: 120 GRAINAFYAYKRFKFAVGIE----------DFQG-------LLSALCRYKNVQDAEHLMF 162
A++ F + ++G+E D+ G L + K A +++
Sbjct: 423 --ALDLFSNME----SLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
CN ++ +G EA+ ++ E+ G+ D V+++ ++ CYSK
Sbjct: 477 CNASLYSLAE-------------MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVG 523
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + ++L +M ++ E D V N++I L K V++A + MEE +AP VVTYN
Sbjct: 524 QVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYN 583
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKM 339
L+ L K ++ +A Q F+ M G SP T++ LD + +EV + M M
Sbjct: 584 ILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM 643
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
C+P T+ +I F + Q N +++++ + PD + L+ + +G++E+A
Sbjct: 644 NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLR-PDHVTLCTLLPGVIKSGQIEDA 702
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 43/255 (16%)
Query: 168 FPFNTKSFN-----IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
F N S+N ++ +G+C +EA V+ M G+ + +FS ++ K R
Sbjct: 190 FVLNAYSYNGLIHFLLQSGFC------KEALEVYRRMVSEGLKPSLKTFSALMVASGKRR 243
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
N+ V+ L ++M+ MG+ + Y I L + + +A +MK M++ G P+VVTY
Sbjct: 244 NIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYT 303
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
LI LC ARKLD+A F + M+ +
Sbjct: 304 VLIDALCTARKLDDAMCLFTK--------------------------------MKSSSHK 331
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY+ L+ KFS V K+W E+ +G PD ++T L++AL G++ EA
Sbjct: 332 PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDL 391
Query: 403 YMEMKEKQLLPEPKT 417
M+++ +LP T
Sbjct: 392 LDTMRKQGVLPNLHT 406
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 12/301 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G A T Y+++I GK K + + L DEM P+ +T ++I
Sbjct: 817 KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYN---MVISNLVKS 873
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTK 173
+ + +A++ +Y F+ F L+ L + + DA H MF + P N+
Sbjct: 874 NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA-HEMFDGMVHYGCRP-NSA 931
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+NI++NG+ + G A + M + GI D+ S++ ++ A + L F++
Sbjct: 932 IYNILVNGYGKL-GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K+ G++ D YN +I+ L + + ++A+SL M+ +G+ P++ TYNSLI L
Sbjct: 991 LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA + ++E+ G+ P + TY+A + + E +G+ + M GC P T+
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQ 1110
Query: 351 L 351
L
Sbjct: 1111 L 1111
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 164/396 (41%), Gaps = 42/396 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
G Y +I L RK D A L +M+ P VT TLL
Sbjct: 294 GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353
Query: 108 --------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
IL+ C + A + ++ + + L+S
Sbjct: 354 EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG 413
Query: 148 LCRYKNVQDAEHLMFCNKDVFPFNTKSFN-IILNGWCNIIGSSREAERVWMEMSQRGICY 206
L R + DA L F N + ++ I+L + G +A + +M RGI
Sbjct: 414 LLRANRLDDALDL-FSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472
Query: 207 DVVSFSCIISCYSKAR--NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
++V+ C S YS A L + +F+++K G+ D YN ++ +K V +AI
Sbjct: 473 NIVA--CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
L+ M + P+V+ NSLI L KA +++EA Q F M + ++PT+ TY+ L +
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLG 590
Query: 324 RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G+ + L ESM GC P T+ L+ + + K++ +++ PD
Sbjct: 591 KEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVL 650
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ +IH +++ A + +MK K L P+ T
Sbjct: 651 TFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVT 685
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 170/427 (39%), Gaps = 77/427 (18%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A + Y+ ++A LGK + A L + M G P+ +T TLL + C +V
Sbjct: 576 APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL---CKNDEVDL 632
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-------------EHLMFCN---- 164
A+ FY + F ++ + +++A +H+ C
Sbjct: 633 ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPG 692
Query: 165 -------KDVFPFNTKSF-----NIILNGWCNIIGS------SREAERVWMEMSQRGICY 206
+D F F NI + W +++G + +A + R IC
Sbjct: 693 VIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICK 752
Query: 207 D------VVSFSC------------------------------IISCYSKARNLHKVLRL 230
D ++ C +I + + N+ L
Sbjct: 753 DDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNL 812
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F++MK G D YN++I A K + + L M +G PN +TYN +I L K
Sbjct: 813 FEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+ +LD+A + ++ SPT T+ +D ++++G ++ + + M GC+P +
Sbjct: 873 SNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAI 932
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ + + + + + + G PD SYT L+ L + G++++A Y+ ++K
Sbjct: 933 YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992
Query: 408 EKQLLPE 414
+ L P+
Sbjct: 993 QAGLDPD 999
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 38/284 (13%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA R+ M G DVV+++ +I AR L + LF +MK + D+ Y
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++ + + + ME G AP+VVT+ L+ LCKA +++EA D M +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 307 RGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK---------- 353
+G+ P + TY+ + ++R ++ L +M +G +PT TYI+LI
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 354 -------------------------KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ + G ++NE+ +G PD +Y ++
Sbjct: 458 ALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMK 517
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G+++EA + EM + Q P+ L D Y VE
Sbjct: 518 CYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 12/282 (4%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ LC++K A ++ F + K +N++++G+ + + A ++ EM
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEV-HNVEVAWNLFEEMKS 818
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G D +++ +I + K+ ++++ L+D+M G + + YN VI L K +
Sbjct: 819 AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-- 319
A+ L ++ +P T+ LI L K+ +LD+A + FD M+ G P Y+
Sbjct: 879 AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938
Query: 320 ----LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + T E F + M K G +P +Y +L+ + + + ++ + G
Sbjct: 939 GYGKLGHVDTACEFF---KRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y +I+ L + + EEA + EM+ + ++P+ T
Sbjct: 996 LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 160/401 (39%), Gaps = 44/401 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG A + Y+ M+ KV + D A L+ EM + P ++ +L+ + + V
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
+ A F + A + + LL+ L + +Q A L N NT +F
Sbjct: 561 EE---AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +L+ C A +++ +M+ DV++F+ II + K + + LF QMK
Sbjct: 618 NTLLDCLCKN-DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676
Query: 236 RM-----------------------------------GIECDRKVYNAVIHALAKGRLVK 260
++ G DR + V+ + +
Sbjct: 677 KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTE 736
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR-GISPTIRTYHAF 319
AI + + + + + +IK LCK +K AR F + + G+ PT++ Y+
Sbjct: 737 KAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLL 796
Query: 320 LDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+D + E + L E M+ GC P TY LI + + +F +++E+ G
Sbjct: 797 IDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGC 856
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y +I L + +L++A Y + P P T
Sbjct: 857 KPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 156/385 (40%), Gaps = 47/385 (12%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A F+ K+ G + + Y+ +I +V + AW L +EM+ P T +L
Sbjct: 772 VARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
+ H IN + + + +L+ C+
Sbjct: 832 I-------DAHGKSGKINELF-----------DLYDEMLTRGCK---------------- 857
Query: 167 VFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
P NT ++N++++ N++ S+R +A ++ + +F +I K+ L
Sbjct: 858 --P-NTITYNMVIS---NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRL 911
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+FD M G + +YN +++ K V A K M ++G+ P++ +Y L
Sbjct: 912 DDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTIL 971
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMG 340
+ LC A ++D+A F+++ Q G+ P + Y+ ++ + RT EE L M+ G
Sbjct: 972 VDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT-EEALSLFHEMQNRG 1030
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P TY LI K++ E+ G P+ +Y ALI L+G E A+
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAY 1090
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWS 425
Y +M P T L + S
Sbjct: 1091 GIYKKMMVGGCDPNTGTFAQLPNQS 1115
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 168/348 (48%), Gaps = 20/348 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG + +T++ L ++ + +A L EM + GP L T + IL+R +
Sbjct: 52 KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM---QAGPFLPTSASHNILLRGF--- 105
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
GRAI F K +E + LLSAL + +A L M C+ D+
Sbjct: 106 FMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIM----- 160
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N++++G+C I G + EA+ + E+ + G +V ++S II+CY K + + +F +
Sbjct: 161 TYNVLMDGYCKI-GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 219
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR- 292
M + +N +I K +++DAI L ME+ G +VTYN+LI LCK R
Sbjct: 220 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRG 279
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ A F+++ G++PTI TY++ + + LL M GC+P TY L
Sbjct: 280 GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCL 339
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
I + + +++N ++ P+ +++ LI L K+EEA
Sbjct: 340 ISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEA 384
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 21/321 (6%)
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
RK D A L E+ G P+ T +LIR +C + +A++ F K
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPN---AHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPN 59
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERV 195
LL LC + A L F PF + S NI+L G+ + R E
Sbjct: 60 ASTMNTLLLGLCEIGQMSSALKL-FREMQAGPFLPTSASHNILLRGF---FMAGRAIE-F 114
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G+ D+ S+ ++S S + + + LF M D YN ++ K
Sbjct: 115 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCK 171
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+A SLMK + + G PNV TY+ +I CK K++EA + F +M++ P T
Sbjct: 172 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 231
Query: 316 YHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK---VWN 369
++ + + G E+ L M K+GC+ T TY LI + R G V+ ++N
Sbjct: 232 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR--GGVYTAVDLFN 289
Query: 370 EISENGNGPDRSSYTALIHAL 390
++ G P +Y +LI
Sbjct: 290 KLEGAGLTPTIVTYNSLIQGF 310
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 25/275 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY + Y +I K+ K + AW + +M P+ VT TL I +C
Sbjct: 187 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL---IAGFCKAG 243
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN-VQDAEHLMFCNK----DVFPFNT 172
+ AI F ++ I + L+ +LC+ + V A L NK + P
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLF--NKLEGAGLTP-TI 300
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++ G+ + + R+ M G DV++++C+IS A + RLF+
Sbjct: 301 VTYNSLIQGFSE---RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN 357
Query: 233 QMKRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
G+ C V +N +I L + V++A +++ M AP++ T+N++I CK
Sbjct: 358 -----GMACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCK 408
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A + +AR+ +ML+ G P T +A I++
Sbjct: 409 AGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQS 443
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 117/246 (47%), Gaps = 12/246 (4%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+F N ++N+++ G+C G +A V+ +M G+ + + + ++ + +
Sbjct: 20 LFAPNAHTYNVLIRGFCKG-GQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 78
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L+LF +M+ +N ++ GR AI K M+ GV P++ +Y+ L+
Sbjct: 79 ALKLFREMQAGPFLPTSASHNILLRGFFMAGR----AIEFFKEMKASGVEPDLESYHILL 134
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
L + ++ EA F M SP I TY+ +D + G+ E L++ + K G +
Sbjct: 135 SALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE 191
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY ++I + + + ++V+ ++ E+ P+ ++ LI G LE+A +
Sbjct: 192 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 251
Query: 403 YMEMKE 408
+ EM++
Sbjct: 252 FAEMEK 257
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 32/229 (13%)
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
AR + LRLF ++ + YN +I KG + A+S+ M+ G+ PN T
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 281 YNSLIKPLCK------ARKLDEARQA--------------------------FDEMLQRG 308
N+L+ LC+ A KL QA F EM G
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASG 122
Query: 309 ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ P + +YH L + + M C P TY +L+ + + Q +
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLM 182
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
EI + G P+ +Y+ +I+ K+EEA + +M+M E +P T
Sbjct: 183 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 231
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 190/437 (43%), Gaps = 69/437 (15%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A K++G + R + MI L K +K D A ++ + M P T +C
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGAT----------FC 344
Query: 115 AVHD----VGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMF----- 162
++ D GR +A+ Y+R A I + + L+ + +D H M+
Sbjct: 345 SLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDG-HKMYKEMMR 403
Query: 163 --CNKDVFPFNT------------------------------KSFNIILNGWCNIIGSSR 190
C+ D+ NT +S++I+++ G +R
Sbjct: 404 SGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKA-GFAR 462
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E ++ M +G D +++ +I + K+ ++K +L ++MK MG Y +V+
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV 522
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
LAK + +A L + + G+ N V Y+SLI K ++DEA +EM+Q+G++
Sbjct: 523 DGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLT 582
Query: 311 PTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + T++ LD + EE+ L +SM+ + C P TY +LI + R+F F
Sbjct: 583 PNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVF 642
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
W E+ + G P+ +YTA+I L +G + +A + + +P+ SYN
Sbjct: 643 WQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSA--------SYN 694
Query: 428 KQFVERQIA--SLKAHQ 442
IA +L A+Q
Sbjct: 695 AMIEGLSIANRALDAYQ 711
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 187/425 (44%), Gaps = 45/425 (10%)
Query: 3 TLVDILREF--SHKRSEMRNKIEECGIKVSSELVSEVLS-WVRNDWEAAFTFFLWAGKQS 59
TL+ L E S + + N+++E G +V+ L++ ++ + R A L K +
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
+ Y+ I GKV K D AW EM+ P VT +++ ++ C + +
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVL---CKANRL 182
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A+ F E + C Y ++N ++
Sbjct: 183 DEAVEIF------------EQMEQNRQVPCAY----------------------AYNTMI 208
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+ + G EA + +G VV+++CI++C K K LR+F++MKR +
Sbjct: 209 MGYGS-AGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ YN +I L K V+ A + +M+E G+ PNV T N +I LCKA+KLDEA
Sbjct: 268 P-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F+ M + SP T+ + +D + + G ++ + + E M P Y LI+ F
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + + K++ E+ +G PD + +F G+ E+ + E+K + LP+ +
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446
Query: 417 TDELL 421
+ +L
Sbjct: 447 SYSIL 451
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 17/397 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I +L K + A+ + D M+ P++ +T+ I+I R C + A + F
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNV---RTINIMIDRLCKAQKLDEACSIFE 329
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW-CN 184
+ F L+ L + V DA + + D P ++I N + C+
Sbjct: 330 GMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCD 389
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ +++ EM + G D++ + + C KA K LF+++K G D +
Sbjct: 390 ---RKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y+ +IH+L K ++ L +M+++G + YN++I CK+ K+++A Q +EM
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Query: 305 LQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
G PT+ TY + +D I +E + L E + G + Y LI F + +
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT---- 417
+ V E+ + G P+ ++ L+ L ++ EA + MK+ + P T
Sbjct: 567 DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCIL 626
Query: 418 -DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ L + +NK FV Q + +P + T +IS
Sbjct: 627 INGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 42/343 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G KFD A++L++ R PS+V +L + + G+ A
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK------GKTDKALR 257
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
++ K +D P N ++NII+ C G
Sbjct: 258 IFEEMK-------------------------------RDAMP-NLPTYNIIIGMLCK-AG 284
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ A +V M + G+ +V + + +I KA+ L + +F+ M D +
Sbjct: 285 NVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFC 344
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I L K V DA + + M + PNVV Y SLI+ K + ++ + + EM++
Sbjct: 345 SLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRS 404
Query: 308 GISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G SP + + ++D + + GE G L E ++ G P +Y +LI +
Sbjct: 405 GCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARET 464
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
++++ + + G D +Y +I +GK+ +A+Q EMK
Sbjct: 465 YELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L G + +G S ++ +M + G +V + +I +S+ + L L D+MK
Sbjct: 67 LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ D +YN I K V A M+ G+ P+ VTY S++ LCKA +LDEA
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV 186
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ F++M Q P Y+ I+ G +E + LLE R GC P+ Y ++
Sbjct: 187 EIFEQMEQNRQVPCAYAYNTM--IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + +++ E+ + P+ +Y +I L G +E A + MKE L P
Sbjct: 245 CLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFP 303
Query: 414 EPKTDELLQD 423
+T ++ D
Sbjct: 304 NVRTINIMID 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 15/280 (5%)
Query: 54 WAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY 113
+A K G TR Y+T+I K K + A+ L++EM+ P++VT +++
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVD----- 523
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC----RYKNVQDAEHLM--FCNKDV 167
+ + R A+ ++ K + GIE Q + S+L + V +A +M K +
Sbjct: 524 -GLAKIDRLDEAYMLFEEAK-SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N +L+G EA + M + +++ +I+ K R +K
Sbjct: 582 TP-NVYTWNCLLDGLVKA-EEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKA 639
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M++ G++ + Y A+I LAK V A SL + G P+ +YN++I+
Sbjct: 640 FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
L A + +A Q F+E +G S +T A LD + E
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAE 739
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 93/226 (41%), Gaps = 7/226 (3%)
Query: 193 ERVWMEMSQRGICYDVVSFSCI--ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E++ EMS G + +++C+ ++ K+R L + L M+ Y +I
Sbjct: 11 EQILGEMSIAG--FGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLI 68
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL++ ++L M+E G NV +LI+ + ++D A DEM
Sbjct: 69 GALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
I Y+ +D + G + + M+ G P + TY ++ + + ++
Sbjct: 129 ADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEI 188
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ +N P +Y +I GK +EA+ + K +P
Sbjct: 189 FEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIP 234
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 27/380 (7%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + + G Y T+I L DTA L++EM P++V LL
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL---H 172
Query: 112 RYCAV---HDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--F 162
YC VG+ GIE + L+ +LCR+ V+ A +M
Sbjct: 173 GYCKTGRWESVGKVFEEMSGR-------GIEPDVVMYTALIDSLCRHGKVKKAARVMDMM 225
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ + P N ++N+++N C GS REA + MS++G+ DVV+++ +I+ S
Sbjct: 226 TERGLEP-NVVTYNVLINSMCKE-GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVL 283
Query: 223 NLHKVLRLFDQMKR--MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ + + L ++M + + D +N+VIH L K ++ A+ + M E G N+V
Sbjct: 284 EMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVA 343
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMR 337
+N LI L + K+ +A + DEM G+ P TY ++ +R E L MR
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G +P YI L+K G ++NE+ N D ++Y+ +IH F +G+ +
Sbjct: 404 HQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCK-LDAAAYSTMIHGAFKSGEKK 462
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
A ++ +M ++ L+P+ T
Sbjct: 463 IAEEFLKDMIDEGLIPDAVT 482
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ ALC + A L+ +D V P + ++ ++ G C+ E + E
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSMQDCGVRP-DVVTYGTLIRGLCDAADVDTAVE-LLNE 154
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + GI +VV +SC++ Y K V ++F++M GIE D +Y A+I +L +
Sbjct: 155 MCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGK 214
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
VK A +M M E+G+ PNVVTYN LI +CK + EA M ++G+ P + TY+
Sbjct: 215 VKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNT 274
Query: 319 F---LDIIRTGEEVFGLLESM---------------------------------RKM--- 339
L + +E LLE M R M
Sbjct: 275 LITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE 334
Query: 340 -GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC+ + +LI R + ++ +E++ +G PD +Y+ LI+ ++E
Sbjct: 335 NGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVER 394
Query: 399 AHQYYMEMKEKQLLPEP 415
A Y EM+ + + PEP
Sbjct: 395 AESYLSEMRHQGMEPEP 411
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 207 DVVSFSCIISCYSKARNLHK---VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D VS++ +++ + L +LR+ R+ + Y ++ AL R A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L++SM++ GV P+VVTY +LI+ LC A +D A + +EM + GI P + Y L
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+TG E V + E M G +P Y LI R + +V + ++E G P+
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y LI+++ G + EA M EK + P+
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 16/348 (4%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
GKV+K ++ E RG E P++VT +LI C V A++
Sbjct: 213 GKVKKAARVMDMMTE-RGLE--PNVVTYN---VLINSMCKEGSVREALDLRKNMSEKGVQ 266
Query: 136 VGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
+ + L++ L + +A E +M V P + +FN +++G C I G R+
Sbjct: 267 PDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP-DLMTFNSVIHGLCKI-GWMRQ 324
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A +V M++ G ++V+F+ +I + + K + L D+M G++ D Y+ +I+
Sbjct: 325 ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
K R V+ A S + M +G+ P V Y L+K +C + +AR F+EM R
Sbjct: 385 GFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKL 443
Query: 312 TIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
Y + ++GE+ L+ M G P TY + I F++ +V
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+++ +G PD + + +LI G E+ + EM K + +PK
Sbjct: 504 KQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPK 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 174 SFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N +L C + ++ RV + + +S++ ++ R + + L
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M+ G+ D Y +I L V A+ L+ M E G+ PNVV Y+ L+ CK
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+ + + F+EM RGI P + Y A +D + R G ++ +++ M + G +P TY
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI + + +SE G PD +Y LI L +++EA EM +
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297
Query: 409 KQ 410
+
Sbjct: 298 GE 299
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 10/286 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET--GPSLVTKQTLLILIRRYCA 115
+ G Y+T+I L V + D A AL++EM GET P L+T + +I C
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS---VIHGLCK 318
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
+ + +A+ + F L+ L R V+ A LM + + P ++
Sbjct: 319 IGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQP-DSF 377
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+++I++NG+C + R AE EM +G+ + V + ++ + + LF++
Sbjct: 378 TYSILINGFCKMRQVER-AESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE 436
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R + D Y+ +IH K K A +K M ++G+ P+ VTY+ I K+
Sbjct: 437 MDR-NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGD 495
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
L A + +M G P + + + + + +LE R+M
Sbjct: 496 LAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 175/387 (45%), Gaps = 25/387 (6%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A F + G A + Y+T+I L K + L +E+ P +VT TL
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTL- 257
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------ 161
I C D+ A + + L++ LC+ + +A L+
Sbjct: 258 --IDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 315
Query: 162 FCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
C DV P N ++N L+G C ++ + E R + S R + D V+FS +I
Sbjct: 316 SC--DVLP-NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VSPDTVTFSTLIDGLC 371
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K + + +FD M G + YNA+++ L K ++ A ++++SM +KGV P+V+
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLES 335
TY+ L+ CKA ++DEA + M RG +P + T+++ +D + R+G E F + +
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG-EAFQMFDD 490
Query: 336 MR-KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K G P TY LI R + G + + + + PD ++ I+ L G
Sbjct: 491 MALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLG 546
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ A Q Y M E +L+P+ T +L
Sbjct: 547 DVSRALQVYNRMLELELVPDKVTFNIL 573
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 167/388 (43%), Gaps = 42/388 (10%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
GY + Y+ ++ L K K + A A+I+ M P ++T +L+ +C
Sbjct: 389 GGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS---VLVDAFCKASR 445
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---------------EHLMFC 163
V A+ + + F ++ LC+ +A + + +C
Sbjct: 446 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYC 505
Query: 164 NK-----------------DVFP-FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
D P +T +FN +NG + +G A +V+ M + +
Sbjct: 506 TLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL-SKLGDVSRALQVYNRMLELELV 564
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D V+F+ +I+ KA N + LF++M ++ D + A+I L K V+ A +
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLD 321
+ M GV PNVVTYN+L+ LCK+ +++EA Q +EM+ G P TY +A
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
RT ++ L+ ++ G P TY +L+ + Q V E+ G+ PD
Sbjct: 685 ASRT-DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEK 409
+Y LI +L G LEEA + + +M +
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 170/406 (41%), Gaps = 45/406 (11%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
C ++ + + +L+ + + E F+ WA G+ H+ ++ + +L K A
Sbjct: 71 CKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKA 130
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
L P+ T TLL Y A DV R + F + +V
Sbjct: 131 IDLFRSRLPPRCRPNHFTYSTLLR--ATYKAGGDVERTLGFFRRIRSSSRSVA------- 181
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
+NI+L C ++R E EM++ G+
Sbjct: 182 -----------------------------DYNIVLQSLCRAGETARALEIFRGEMARDGV 212
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
+V+++ II+ K+ L + LF+++ G D YN +I +L K +++A
Sbjct: 213 APTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARR 272
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLDI 322
L M + PNVVTY+ LI LCK ++DEAR+ EM ++ + P I TY++FLD
Sbjct: 273 LHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 332
Query: 323 I---RTGEEVFGLLESMR--KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ E L+ S+R + P T+ LI + Q V++++ G
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ +Y AL++ L K+E AH M +K + P+ T +L D
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 175/393 (44%), Gaps = 30/393 (7%)
Query: 40 WVRNDWEAAFTFFL-WAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
W E A T GK G+ Y+T+I L K + A L +M +
Sbjct: 718 WKSGQTEQAITVLEEMVGK--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775
Query: 99 SLVTKQTLLILIRRYCAVH--DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
+ T +LI C V D R + K I + L LC+ + +
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835
Query: 157 AEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
A LM +D V P +T +F+ +++G C G + EA V+ +M G +VV+++
Sbjct: 836 ACELMRSLRDGSLRVSP-DTVTFSTLIDGLCKC-GQTDEACNVFDDMIAGGYVPNVVTYN 893
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+++ K + + + + M G+ D Y+ ++ A K V +A+ L+ M +
Sbjct: 894 VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-LQRGISPTIRTYHAFLD-IIRTG---- 326
G PNVVT+NS+I LCK+ + EA Q FD+M L+ G++P TY +D + RTG
Sbjct: 954 GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ 1013
Query: 327 EEVFGLLESMRKMGCQPTNDTYIM--LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EV LL++M P DTY I S+ G+V + + + E PD+ ++
Sbjct: 1014 AEV--LLDAM------PDPDTYAFNCCINGLSK---LGDVSRALHRMLELELVPDKVTFN 1062
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
LI G E+A + EM K L P+ T
Sbjct: 1063 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 1095
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 20/391 (5%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T + T+I L K + D A ++ D+M G P+++T L + C + RA
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL---VNGLCKADKMERAHA 416
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
+ + + L+ A C+ V +A L+ ++ P N +FN I++G
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP-NVVTFNSIIDGL 475
Query: 183 CNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C S EA +++ +M+ + G+ D +++ +I + + L D M +
Sbjct: 476 CKS-DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DP 530
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +N I+ L+K V A+ + M E + P+ VT+N LI CKA ++A F
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM+ + + P + T+ A +D + + G E +L+ M +G P TY L+ +
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + E+ +G PD +Y +L++AL + ++A Q E+K P+ T
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710
Query: 419 ELLQDWSYNKQFVERQIASL-----KAHQPQ 444
+L D + E+ I L K H P
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 181/454 (39%), Gaps = 59/454 (12%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T ++ I L K+ A + + M E P K T ILI C + +A
Sbjct: 532 TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPD---KVTFNILIAGACKAGNFEQASA 588
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC 183
F + F L+ LC+ V+ A ++ ++ P N ++N +++G C
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G EA + EM G D +++ ++ +A L+L ++K G + D
Sbjct: 649 KS-GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL--------- 294
YN ++ L K + AI++++ M KG P+VVTYN+LI LCKA L
Sbjct: 708 VTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGD 767
Query: 295 -----------------------------DEARQAFDEMLQRG--ISPTIRTYHAFLDII 323
DEAR+ EM+++ + P I TY++FLD +
Sbjct: 768 MSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGL 827
Query: 324 ---RTGEEVFGLLESMR--KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E L+ S+R + P T+ LI + Q V++++ G P
Sbjct: 828 CKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
+ +Y L++ L K+E AH M +K + P+ T +L D V+ + L
Sbjct: 888 NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947
Query: 439 KAHQPQSGQNTRVIS--------KKSDQDREFLQ 464
+ G V++ KSDQ E Q
Sbjct: 948 HGMASR-GCTPNVVTFNSIIDGLCKSDQSGEAFQ 980
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 15/260 (5%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T + T+I L K + D A + D+M G P++VT +L+ C + RA
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN---VLMNGLCKTDKMERAHA 910
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
+ + + L+ A C+ +V +A L+ ++ P N +FN I++G
Sbjct: 911 MIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP-NVVTFNSIIDGL 969
Query: 183 CNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C S EA +++ +M+ + G+ D +++ +I + + L D M +
Sbjct: 970 CKS-DQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DP 1024
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D +N I+ L+K V A+ M +E + P+ VT+N LI CKA ++A F
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALF 1081
Query: 302 DEMLQRGISPTIRTYHAFLD 321
+EM+ + + P + T+ A +D
Sbjct: 1082 EEMVAKNLQPDVMTFGALID 1101
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 25/245 (10%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
GY + Y+ ++ L K K + A A+I+ M P ++T +L+ +C
Sbjct: 883 GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS---VLVDAFCKASH 939
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--------KDVFPF 170
V A+ + + F ++ LC+ +A MF + D +
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQ-MFDDMTLKHGLAPDKITY 998
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
T + GW + +AE + M D +F+C I+ SK L V R
Sbjct: 999 CTLIDGLFRTGW------AGQAEVLLDAMPDP----DTYAFNCCINGLSK---LGDVSRA 1045
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M + + D+ +N +I K + A +L + M K + P+V+T+ +LI LCK
Sbjct: 1046 LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 1105
Query: 291 ARKLD 295
A +++
Sbjct: 1106 AGQVE 1110
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 15/352 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ MI + K+ A + +M P T + ++ YC DV A F
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL---GYCRSKDVDSAFRVFE 251
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNI 185
+ L+ LC + +A L KD +P N ++ ++ G C
Sbjct: 252 EMPNRNEV----SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYP-NVYTYTALIKGLCR- 305
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A + EM +R + D+++++ +I+ +A +L RL MK G+ D++
Sbjct: 306 -KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y I L K V++A L S+ E+GV+ NV+ Y+ LI CK K+DEA F++ML
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML 424
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ SP T++A + + + +E L + M KMG +PT T+ +LI + + F
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFD 484
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ K ++ +G P +Y A I GK++EA ++MKE+ + P+
Sbjct: 485 DAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPD 536
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 167/412 (40%), Gaps = 47/412 (11%)
Query: 74 ILGKVRK-FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
I G RK A L+DEM P L+T +L I C + A K
Sbjct: 300 IKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSL---IAGQCRAGHLDSAYRLLSLMKER 356
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
+ + LC+ V++A L ++ N ++++++G+C + G E
Sbjct: 357 GLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV-GKVDE 415
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A ++ +M + + +F+ +I A NL + L LFDQM +MG++ +N +I
Sbjct: 416 AGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIG 475
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ K DA ++ M G P TYN+ I+ C A K+ EA +M + G+ P
Sbjct: 476 RMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPP 535
Query: 312 TIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF------------- 355
TY + + + F +L+SM C+P++ T++ LIK+
Sbjct: 536 DDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGET 595
Query: 356 --------------SRWR--QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ W+ +F V +++ E+ ++G PD Y LI + L A
Sbjct: 596 GVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIA 655
Query: 400 HQYYMEMKEKQLLPEPKTDEL-------LQDWSYNKQFVERQIASLKAHQPQ 444
+ +M+++ + P LQ + VE I S H PQ
Sbjct: 656 LKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICS--GHSPQ 705
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 11/218 (5%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC-------DRKVYNAVIHALAKGRLV 259
D+ S + CY++ L L D+M ++ E D +N +I+ K V
Sbjct: 151 DITKLS--LKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFV 208
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+A M M + G++P+ T S I C+++ +D A + F+EM R + H
Sbjct: 209 KEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGL 268
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ R E V L M+ C P TY LIK R + + +E+ E PD
Sbjct: 269 CEAGRIDEAV-SLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPD 326
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Y +LI G L+ A++ MKE+ L+P+ +T
Sbjct: 327 LITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRT 364
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 152/400 (38%), Gaps = 43/400 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + + Y +I KV K D A L ++M P+ T L I C+
Sbjct: 390 EEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL---IHGLCSAG 446
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK---- 173
++ A++ F + + F L+ + + + DA C + + K
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK---CLQKMMSSGEKPVAR 503
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N + +C+ G +EAE + ++M + G+ D +++ +I Y K + +
Sbjct: 504 TYNAFIEVYCSA-GKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKD-----------------------------AIS 264
M E + ++I L R V + I
Sbjct: 563 MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIE 622
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-- 322
L + ME+ G P+ Y LI +CK L A + D+M + GISP+ ++A +
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCC 682
Query: 323 -IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
++ E ++E M G P + LI + V+ ++ G D
Sbjct: 683 KLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ LI + G +EE Q + EM++ P+T +L
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
V+ LF++M++ G D K Y +I + K + A+ L+ M+++G++P+ + +N++I
Sbjct: 620 VIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQP 343
CK +K EA ++M+ G SP + + + GE G + + +R G
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYND 739
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ +LI + +++ E+ +NG +Y+ L L
Sbjct: 740 DEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ EM + G D + +IS K NL L+L DQM++ GI V+NAVI
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K + +A ++++ M G +P + +LI L + + + F ++ G +
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 314 RTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ +D +++ G EE L E M K GC + TY +L +K
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 145/278 (52%), Gaps = 4/278 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + +NI++N +C GS R+A+ ++ E+ +RG+ VSF+ +I+ K+RNL +
Sbjct: 219 FPPKVQYYNILINKFCKE-GSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RL M+ I D Y+ +IH L K + A L M+++G+ PN +T+ +LI
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPT 344
C++R++D A + +ML G+ P + Y+ L+ + + G+ + L++ MR +G +P
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI + + + ++ ++E G D ++TALI +G++ +A +
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
EM E + P+ T ++ D K V+ LK Q
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 151/319 (47%), Gaps = 7/319 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD- 166
ILI ++C + A F ++ F L++ LC+ +N+ + L ++
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 167 -VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
++P + +++++++G C G AE+++ EM QRG+ + ++F+ +I ++R +
Sbjct: 288 RIYP-DVFTYSVLIHGLCKE-GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + QM MG++ D +YN +++ L K V A L+ M G+ P+ +TY +LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
CK L+ A + M + G+ + A + R G + L M + G +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + TY M+I + + FK+ E+ NG+ P +Y L++ L G+++ A+
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 403 YMEMKEKQLLPEPKTDELL 421
M + P+ T +L
Sbjct: 526 LEAMLNLGVTPDDITYNIL 544
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 165/390 (42%), Gaps = 26/390 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y+ +I K A + +E+R P+ V+ TL I C ++
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTL---INGLCKSRNL 274
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ + + + L+ LC+ + AE L + + P N +F
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRP-NGITFTA 333
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G C S R A + +M G+ D+V ++ +++ K +++K +L D+M+
Sbjct: 334 LIDGQCR---SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G++ D+ Y +I K ++ A+ + K M E+GV + V + +LI C+ ++
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
+A + EM++ G+ P TY +D V F LL+ M+ G +P TY +L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ Q N + + G PD +Y L+ NGK E+ LL
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED------------LL 558
Query: 413 PEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
L+ D++Y V SLK Q
Sbjct: 559 KLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 175/393 (44%), Gaps = 38/393 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G S Y+ ++ L KVR+ A L DEM P+ VT TL I YC V
Sbjct: 185 KDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTL---IDGYCKVG 241
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---------------- 161
+ A+ K + + LL+ LC V DA ++
Sbjct: 242 GIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSF 301
Query: 162 --------------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
F K++ + +++ I+LNG C + G +AE V ++ + G+
Sbjct: 302 VFDDHSNGAGDDGLFDGKEI-RIDERTYCILLNGLCRV-GRIEKAEEVLAKLVENGVTPS 359
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+S++ +++ Y + ++ K + +QM+ G+E +R +N VI + V A + ++
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR 419
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M EKGV+P V TYNSLI + + DEM + GI P + +Y + ++ +
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Query: 328 EVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
++ +L M G P + Y MLI+ + + F+ ++E+ ++G +Y
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
LI+ L NG++++A +++M K P+ T
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKGCNPDVIT 572
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 169/404 (41%), Gaps = 62/404 (15%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R Y ++ L +V + + A ++ ++ PS ++ IL+ YC DV +AI
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN---ILVNAYCQEGDVKKAILT 382
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ F ++S C V AE + K V P +++N ++NG+
Sbjct: 383 TEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSP-TVETYNSLINGY- 440
Query: 184 NIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNL---------------- 224
G R + EM + GI +V+S+ +I+C K R L
Sbjct: 441 ---GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497
Query: 225 -------------------HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
R FD+M + GI+ YN +I+ L + VK A L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR- 324
M KG P+V+TYNSLI K+ + + +D+M GI PT+ T+H + R
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK 617
Query: 325 ----TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN---EISENGNG 377
T +++F + M +M P Y +I ++ + GNV K + ++ + G
Sbjct: 618 EGVVTMDKMF---QEMLQMDLVPDQFVYNEMIYSYA---EDGNVMKAMSLHQQMVDQGVD 671
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D+ +Y +LI A + ++ E +MK K L+P+ T +L
Sbjct: 672 CDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNIL 715
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 164/359 (45%), Gaps = 33/359 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-------ILI 110
+ G + + Y+++I G+ F + +DEM P++++ +L+ LI
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLI 482
Query: 111 RRYCAVHD-VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNK 165
+ D +GR ++ E + L+ A C ++DA + ++
Sbjct: 483 DAEIVLADMIGRGVSP-----------NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D ++N ++NG G ++AE ++++M+ +G DV++++ +IS Y+K+ N
Sbjct: 532 DA---TLVTYNTLINGLGRN-GRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQ 587
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K L L+D+MK +GI+ ++ +I+A K G + D + + M + + P+ YN +
Sbjct: 588 KCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD--KMFQEMLQMDLVPDQFVYNEM 645
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
I + + +A +M+ +G+ TY++ + R E+ L++ M+ G
Sbjct: 646 IYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGL 705
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P DTY +LIK + F + + E+ E G + S LI L G L EA
Sbjct: 706 VPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQ 764
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 31/301 (10%)
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C++ EA ++ M + G S + ++ +R+ K L +F + G
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y + A + + LMKSM + G+ P+V YN ++ LCK R++ +AR+ F
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
DEM+QR + P TY+ +D + G EE G E M++ + TY L+
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275
Query: 359 RQFGNVFKVWNEISENGNGP----------------------------DRSSYTALIHAL 390
+ + +V E+ +G P D +Y L++ L
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTR 450
G++E+A + ++ E + P + +L + + V++ I + + + + + R
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395
Query: 451 V 451
+
Sbjct: 396 I 396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 52/283 (18%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF FF QSG + Y+T+I LG+ + A L +M G P ++T +L
Sbjct: 519 AFRFFDEM-IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSL- 576
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------M 161
I Y + + + + K + F L+ A CR + V + + M
Sbjct: 577 --ISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQM 633
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
D F +N ++ +G N++ +A + +M +G+ D V+++ +I Y +
Sbjct: 634 DLVPDQFVYNEMIYSYAEDG--NVM----KAMSLHQQMVDQGVDCDKVTYNSLILAYLRD 687
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + ++ L D MK KG+ P V TY
Sbjct: 688 RRVSEIKHLVDDMK-----------------------------------AKGLVPKVDTY 712
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
N LIK LC + + A + EM++RG+ + + + +R
Sbjct: 713 NILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLR 755
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 181/410 (44%), Gaps = 47/410 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++A+L + A ++++M + ++ + ++ +C D+ A F
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKV---ILDEAVYTTVLSGFCNKGDLVSARRWFD 388
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+R A + L++ LCR +++AE + M + + ++ ++++G+C
Sbjct: 389 EMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR--LDVDEVTYTVLVDGYCK 446
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EA +V M QRG+ +VV+++ + K ++ L +M G+E +
Sbjct: 447 R-GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN++I+ L K + A+ M M+ G+ P+V TY +LI LCK+ +LD A EM
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFG---LLE---------------SMRKMGC----- 341
L GI PTI TY+ ++ V G LLE S+ K C
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625
Query: 342 ---------------QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+P +TY +LIK + R NE+ E G SSY+AL
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
I L K EA + + +M+++ EP D+++N+ +E +A
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLA 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N S+NI+L C G +A +++ EM+ DVV++ +I Y L ++L
Sbjct: 261 NVCSYNILLKVLCGA-GRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKL 316
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D M G+E + VY +V+ L V DA+++++ M V + Y +++ C
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
L AR+ FDEM ++G++ TY ++ + R GE E +L+ M T
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+ + + + F+V N + + G P+ +YTAL L G ++ A++ EM
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496
Query: 408 EKQL 411
K L
Sbjct: 497 NKGL 500
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 7/244 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K D A + +M P + T TL I C ++ RA +
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL---IDALCKSGELDRAHDLLQ 563
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I + L++ C V+ + L+ K++ P N ++N ++ +C I
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP-NATTYNSLMKQYC-I 621
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + ++ M R + + +++ +I + KAR++ + ++M G
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASS 681
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+A+I L K + +A L M ++G YN I L+ DE++
Sbjct: 682 YSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELV 741
Query: 306 QRGI 309
+ I
Sbjct: 742 EASI 745
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 169/380 (44%), Gaps = 15/380 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + K G + Y ++ L K K AW ++ EM P+LVT +LL
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL---H 269
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C V A+ + + L+ LC+ V+DA ++ +K P
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +N+++NG C E+ + GI DVV++S +I ++ L + R
Sbjct: 330 -DLMIYNMLINGLCK-ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 387
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L +K G D +Y+ +I L K V +A L + M G +VVTY++LI LC
Sbjct: 388 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLC 447
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTND 346
KA ++DEA M++ G P+ TY++ L + +E L+E M + C P+
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 507
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNE-----ISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
TY +LI R + + + + ++ G D +Y++LI L G++ EA
Sbjct: 508 TYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567
Query: 402 YYMEMKEKQLLPEPKTDELL 421
Y+ EM + ++P+ T +L
Sbjct: 568 YFQEMIDNGVIPDHITYSIL 587
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 15/363 (4%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
A + SG T Y +++ L K ++ D A A++ EMR P++VT +L I C
Sbjct: 69 AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSL---IDGLC 125
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNK-----D 166
++ RA F K + + + + LL L R ++ A L M + D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
N +++++++G C S+ E + M RG DV++++ ++ K +
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVE-LLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ +M G + YN+++H L + R V DA++LM+ M +G PNVVTY +LI
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQP 343
LCK ++ +A +M+ +G +P + Y+ ++ + ++V LL G +P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +I R + ++ + G PD Y+ LI L GK++EA Y
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424
Query: 404 MEM 406
M
Sbjct: 425 EVM 427
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 16/268 (5%)
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
L C DV+ ++ +L G+C G +A+R + EM + + +V S +I
Sbjct: 2 LPICQPDVY-----TYAALLRGFCRG-GEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLC 55
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA+ LR F M+ GI D +Y A++ L K + + A++++ M + G PNVV
Sbjct: 56 KAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVV 115
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESM 336
TYNSLI LCK + D A++ F+ M SP++ TY+ LD + RTG E L + M
Sbjct: 116 TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175
Query: 337 -----RKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
M C P TY +LI + + ++ + G PD +YT L+
Sbjct: 176 LDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L K+ A + EM + +P T
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVT 263
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 209/473 (44%), Gaps = 29/473 (6%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEV--LSWVRNDWEAAFTFFLWAGKQSGYAHST 65
LRE + +R+K I + L+ + + WV WE +SG +
Sbjct: 64 LREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV-----RSGIELNV 118
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+ M+ L K KFD + + EM G +VT TL I YC + A
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTL---IGAYCREGLLEEAFEI 175
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
+ + + +++ LC+ A+ ++ N + P +T ++N +L C
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP-DTTTYNTLLVESC 234
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S EA+ ++ EM ++G+ D+VSFS +I+ +S+ R+L + L F MK+ G+ D
Sbjct: 235 RRDNFS-EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+Y ++H + + +A+ + M E+G +V+ YN+++ LCK + L +A + FDE
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353
Query: 304 MLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M++RG P T+ + + G + L +M + +P Y LI F + +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++W+ + P+ +Y LI+A G + EA + + M EK + P T
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 421 L-------QDWSYNKQFVERQIASLKAHQPQSGQNTRVIS---KKSDQDREFL 463
+ D S +F+ R IA K P +I+ ++ + D+ FL
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIA--KGVAPDHISYNTLINGFVREDNMDKAFL 524
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 167/362 (46%), Gaps = 10/362 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + ++IA+ + R D A +M+ P V +L+ YC
Sbjct: 251 RQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT---VLMHGYCRNG 307
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ A+ + + + +L+ LC+ K + DA+ L + P + +F
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP-DFYTF 366
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G C G+ +A ++ M+QR I D+V+++ +I + K + K L+D M
Sbjct: 367 TTLIHGHCQD-GNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
I + Y +I+A V +A L M EKG+ P +VT N++IK C++
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A + M+ +G++P +Y+ ++ +R ++ F + M K G P TY +++
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
F R + V ++ E G PDRS+YTALI+ L EA +++ EM ++
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Query: 413 PE 414
P+
Sbjct: 606 PD 607
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F +I Y +AR L + F ++ G N+++ L K V+ A + + +
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--E 327
G+ NV T N ++ LCK K D+ + EM GI + TY+ + R G E
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E F ++ SM G +P+ TY +I + ++ + E+ G PD ++Y L+
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPE 414
EA + + EM + ++P+
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPD 257
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I KV + + A L D M + P+ +T ILI YC+V V A +
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG---ILINAYCSVGHVSEAFRLWD 457
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ ++ CR + A+ + K V P + S+N ++NG+ +
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP-DHISYNTLINGF--V 514
Query: 186 IGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ + +W+ +M + G+ D+++++ +++ + + + + + +M GI DR
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
Y A+I+ + +A M ++G AP+ V
Sbjct: 575 TYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 88/240 (36%), Gaps = 64/240 (26%)
Query: 249 VIHALAKGRLVKDAISL-MKSMEEKGVA-----------------PNVVTYNSLIKPLCK 290
++H + R + DA +L ++ + GV+ N + ++ LI+ +
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-----------------DIIRTG------- 326
ARKL E +AF + +G +I ++ L +++R+G
Sbjct: 61 ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120
Query: 327 --------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
++V L M G TY LI + R F++ N ++
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+ G P +Y A+I+ L G+ A +EM L P+ T YN VE
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT--------YNTLLVE 232
>gi|15233088|ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g61360
gi|6850903|emb|CAB71066.1| putative protein [Arabidopsis thaliana]
gi|25054868|gb|AAN71923.1| unknown protein [Arabidopsis thaliana]
gi|332646669|gb|AEE80190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 179/372 (48%), Gaps = 13/372 (3%)
Query: 29 VSSELVSEVLSWV---RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
+S E VSEVL + ++ A FF ++ K S + ++ + + IL ++R FD AW
Sbjct: 64 LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR--FKFAVGIEDFQG 143
AL+ E+R + P+L++ +++ IL+ + + AF ++ F+ G+++F
Sbjct: 124 ALMAEVR--KDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNI 181
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL A C + +++A + F + K+ NI+L G+ G E + EM +RG
Sbjct: 182 LLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEA-GDVTATELFYHEMVKRG 240
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ V++ I + K RN + LRLF+ M R+ + ++ +IH R A
Sbjct: 241 FKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR 300
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDI 322
L + ++G+ P+ YN+L+ L K + A + EM ++GI P T+H+ F+ +
Sbjct: 301 QLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGM 360
Query: 323 IRTGEEVF-GLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+++ E F G+ E +KM P T +ML+K F + +W + E G P
Sbjct: 361 MKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
Query: 379 DRSSYTALIHAL 390
+ L AL
Sbjct: 421 HGHALELLTTAL 432
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 18/247 (7%)
Query: 184 NIIGSSREAERVWMEMSQ-RGICYDVVSF---SCIISCYSKARNLHKVLRLFDQM----- 234
+I+ R ++ W M++ R +++SF S ++ +K + + L F +M
Sbjct: 111 HILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF 170
Query: 235 -KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
K+ G++ +N ++ A R +K+A S+ + + + P+V T N L+ +A
Sbjct: 171 RKKFGVD----EFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGD 225
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
+ + EM++RG P TY +D R E L E M ++ T
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI R ++++EIS+ G PD +Y AL+ +L G + A + EM+EK
Sbjct: 286 LIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 411 LLPEPKT 417
+ P+ T
Sbjct: 346 IEPDSVT 352
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 165/372 (44%), Gaps = 9/372 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q + S Y +I +L + + D A E+ G PS T ++ I+ C
Sbjct: 332 QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV---IQELCKAG 388
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKS-- 174
V A++ + + + L++ LC+ +Q+A E L ++ + ++
Sbjct: 389 RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFS 448
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +LN C + +S+R DVVS+S +I + K L + +L+ QM
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ + YNA ++ L + + DA + + M G +P+V+TY++LI ARK
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
D+A + F+ M+ RG P TY+ L + +E L M + GC P TY L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ F + +V++E+ G+ PD +Y L+ F GK EA Q + M +Q
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688
Query: 412 LPEPKTDELLQD 423
P+ + ++ D
Sbjct: 689 KPDTVSHNIMID 700
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 175/401 (43%), Gaps = 47/401 (11%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S+ H++I L K + D+A +L++ M P + T +LI C + A
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS---MLINELCKADKIQEAQ 429
Query: 124 NAFYAYKR--FKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNII 178
R + + LL++LC+ K V A + M + P + S++I+
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVP-DVVSYSIL 488
Query: 179 LNGWCNI----------------------------------IGSSREAERVWMEMSQRGI 204
++G+C I G +A+ V+ EM G
Sbjct: 489 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
DV+++S +I +S AR + LF+ M G + YN ++H L K +A
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 608
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DII 323
L + M E+G P+ VTY +L+ C K+++A + FDEM+ +G P + Y+ L
Sbjct: 609 LFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Query: 324 RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDR 380
R G+ E L + M C+P ++ ++I S+ ++ + +V+ + ++ G PD
Sbjct: 669 RAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 728
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+Y +LI L +L EA + + E+ +L P+P +L
Sbjct: 729 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 769
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 20/334 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGET-GPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y++++ L K +K A+A+ M + P +V+ ILI +C + ++GRA +
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS---ILIDGFCKIDELGRAEKLY 505
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILN 180
+ + L+ L R + DA+ + C+ DV ++T +++
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST-----LIH 560
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G+ ++ +A ++ M RG + V+++C++ K + LF +M G +
Sbjct: 561 GF-SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 619
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
DR Y +++ ++ A+ + M KG P+VV YN L+K +A K EA+Q
Sbjct: 620 PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQL 679
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTYIMLIKKFS 356
F M+ R P +++ +D + + + +E +M GC P TY LI
Sbjct: 680 FQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 739
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
++ KV+ EI PD ++ L+ A+
Sbjct: 740 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 24/270 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---ILIRRYCAVHDVGRAIN 124
Y+ + L + + A + +EM P ++T TL+ L R++ H++
Sbjct: 520 YNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL----- 574
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNI 177
F + LL LC+ ++ D H +F C+ D + T
Sbjct: 575 -FETMISRGCRPNAVTYNCLLHGLCK-ESKPDEAHELFRKMVERGCDPDRVTYTT----- 627
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L G+CN+ G +A V+ EM +G DVV+++C++ + +A + +LF M
Sbjct: 628 LLYGFCNV-GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDE 296
+ D +N +I L+K + + DA+ + + ME+ G +P++VTYNSLI LC ++L E
Sbjct: 687 QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 746
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
A + F E+ + +SP ++ L+ I+ G
Sbjct: 747 AMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 43/274 (15%)
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R+ + L F ++ + D YN ++ L + R +K A + + M +GV PN TY
Sbjct: 108 RDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY 167
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR-TGEE-----VFG---- 331
L++ C R DEA + F EM+ +G P+ Y + ++ TG+E VFG
Sbjct: 168 AVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE 227
Query: 332 ----------------------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
L +M K GC+P Y ++ +
Sbjct: 228 KRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDE 287
Query: 364 VFKVWNEISENGNGP-DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
FK++ E++ P + ++TA + L +GK+E+A + M+E +P D L++
Sbjct: 288 AFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIR 347
Query: 423 DWSYNKQFVERQIASLKAH----QPQSGQNTRVI 452
+ + + + A L+ QP SG VI
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVI 381
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 18/361 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG + + MI L K +K + + + +M P +VT TL I YC
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL---INAYCRQG 407
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALC------RYKNVQDAEHLMFCNKDVFPFN 171
+ A + + + +++ LC R K V D + + D
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD----- 462
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T ++NI+L C + +AER++ EM +G+ D+VSFS +I SK L + L+ F
Sbjct: 463 TATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
MK G+ D +Y +I + ++ +A+ + M E+G +VVTYN+++ LCK
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+ L EA + F EM +RG+ P T+ ++ + G + L E M + +P TY
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI F + + V ++WN++ P+ SY LI+ G + EA + + EM E
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701
Query: 409 K 409
K
Sbjct: 702 K 702
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
RE + + +G+C + + + ++ K + ++ ++ R G++ + N +
Sbjct: 305 REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIM 364
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+AL K + +++ S + MEEKGV P+VVTYN+LI C+ L+EA + D M +G+
Sbjct: 365 INALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGL 424
Query: 310 SPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY+A ++ + +TG+ G+L+ M K+G P TY +L+ + R + +
Sbjct: 425 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 484
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++E+ G PD S++ALI L NG L++A +Y+ +MK L P+
Sbjct: 485 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 169/401 (42%), Gaps = 53/401 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+ ++ + A + DEM P LV+ L+ L+ + +
Sbjct: 458 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD-- 515
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK------NVQDAEHLMFCNKDVFPFNTK 173
+A+ F K A + L+ CR V+D C DV +NT
Sbjct: 516 -QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT- 573
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
ILNG C S EA+ ++ EM++RG+ D +F+ +I+ Y K N++K + LF+
Sbjct: 574 ----ILNGLCKEKMLS-EADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628
Query: 234 MKRMGIECDRKVYNAVIHALAKGR-----------------------------------L 258
M + ++ D YN +I KG
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A L M EKG ++T N+++K C+A +A + ML +GI P TY+
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ E + F L+ M G P TY +++ FSR + + ++ E G
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
PDRS+YT+LI+ L+EA + + EM ++ +P+ K
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 168/417 (40%), Gaps = 56/417 (13%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLL----------- 107
+ HS + + MI IL + R+ A A+I M + G + +V L
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 108 -ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNK 165
+L+R Y + AF K V I LL L + V A E +
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNL 224
N + NI++N C E + ++ +M ++G+ DVV+++ +I+ Y + L
Sbjct: 352 SGVQVNVYTLNIMINALCK--NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 409
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ L D M G++ YNA+I+ L K A ++ M + G++P+ TYN L
Sbjct: 410 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGC 341
+ C+ + +A + FDEM +G+ P + ++ A + ++ ++ M+ G
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 529
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG------------NG------------ 377
P N Y +LI F R KV +E+ E G NG
Sbjct: 530 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE 589
Query: 378 -----------PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD ++T LI+ +G + +A + M ++ L P+ T L D
Sbjct: 590 LFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 180/440 (40%), Gaps = 65/440 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE------------- 90
D E FF W+ K+ ++ ++ L +++ + +D
Sbjct: 57 DSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVF 116
Query: 91 ----MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
+ GG G T + +L+ Y ++ A AF K + F + + LLS
Sbjct: 117 HSLLLDGGRPG---ATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLS 173
Query: 147 ALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWC-------------------- 183
AL + + D E++ M K N +FNI +NG C
Sbjct: 174 ALVKENKIGDVEYVYKEMI--KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGI 231
Query: 184 --NII---------------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
N++ G +AE EM IC + V+F+ +I + K N+
Sbjct: 232 SPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAA 291
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ F++M++ G++ + YN++I+ L +++AI L M G+ PN+VTYN+LI
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN 351
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQP 343
CK + + EA + FD++ ++ + P + T++ +D + G EE F L SM G P
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP 411
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LI R + ++ NE+ G D +Y LI L N K A +
Sbjct: 412 NVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLL 471
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM L P T L D
Sbjct: 472 NEMFNLGLKPNHVTYNTLMD 491
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 157/335 (46%), Gaps = 19/335 (5%)
Query: 60 GYAHSTREYHTMI---AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G + + Y+T++ G K A A + EM + P+ VT TL I +C
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL---IDGFCKD 286
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+V A AF ++ I + L++ LC +++A L + P N +
Sbjct: 287 ENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKP-NIVT 345
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++NG+C +EA +V+ ++S++ + +V++F+ +I Y K + + L M
Sbjct: 346 YNALINGFCKK-KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
GI + YN +I L + + ++ A L+ ME KG+ +VVTYN LI LCK K
Sbjct: 405 LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKS 464
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTY 348
A + +EM G+ P TY+ +D ++ V +E RK QP TY
Sbjct: 465 RNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK---QPNVVTY 521
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+LIK + + + + NE+ E G P+R++Y
Sbjct: 522 NVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 186/398 (46%), Gaps = 23/398 (5%)
Query: 37 VLSWVRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
VL++V+N + A+ F A K G+ S + +++ L K K + EM
Sbjct: 137 VLAYVKNLELHCAYEAFTRA-KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN-- 153
+L T I I C + +A +A K + + + + L+ C+ +
Sbjct: 196 IHTNL---NTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG 252
Query: 154 -VQDAEHLM---FCNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQRGICY 206
+ AE M NK + P N +FN +++G+C N+ A++ + EM ++G+
Sbjct: 253 KMYKAEAFMKEMLANK-ICP-NEVTFNTLIDGFCKDENVAA----AKKAFEEMQKQGLKP 306
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++V+++ +I+ L + + L+D+M +G++ + YNA+I+ K +++K+A +
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
+ ++ + PNV+T+N++I CK ++E ML GI P + TY+ + +
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 327 EEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+++ LL M G + TY +LI + + N K+ NE+ G P+ +Y
Sbjct: 427 QDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTY 486
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
L+ + GKL+ A M++++ P T +L
Sbjct: 487 NTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVL 524
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 11/270 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I L K + A L D+M G P++VT L I +C
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL---INGFCKK 356
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A F + + + F ++ A C+ +++ L ++ + P N +
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP-NVST 415
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C + A+ + EM +G+ DVV+++ +I K +L ++M
Sbjct: 416 YNCLIAGLCRK-QDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM 474
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+G++ + YN ++ +K A+++ ME++ PNVVTYN LIK CK KL
Sbjct: 475 FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKL 534
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+ A +EML++G++P TY DI+R
Sbjct: 535 EAANGLLNEMLEKGLNPNRTTY----DIVR 560
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 145/285 (50%), Gaps = 5/285 (1%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ LC + DA L N+ P + ++N++++ C G EA + +M
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR-GMLEEACDLIKKM 106
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G DVV+++ ++ K+ + + L LF++M+R+G +R+ +N +I L + +
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 166
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A + ME K + P+ +Y LI L KA KL+EA + F ML GI+P+ TY+
Sbjct: 167 DQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226
Query: 320 LD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + T +E L +SMR GC+P+ T+ +LI + + F++ ++++G+
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH 286
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
PD +Y+ LI L ++++A +M ++Q P T L
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 160/379 (42%), Gaps = 20/379 (5%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND F L SG ST Y ++I L FD A L +M PS VT
Sbjct: 27 NDARNLFQKLL----HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 82
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
++I C + A + + + ++ LC+ V++A L+
Sbjct: 83 YN---VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA--LLL 137
Query: 163 CNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
N+ P N +S N I+ G C +A +V+ EM + I D S+ +I
Sbjct: 138 FNEMERLGCTP-NRRSHNTIILGLCQQ-SKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+KA L++ +LF +M GI YN VIH + + +A+ L KSM KG P+
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----IIRTGEEVFGLLE 334
T+N LI CK KLDEA + M G P + TY + I R ++ LLE
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV-DDARHLLE 314
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K C+PT T LI + + +V + + +G PD +Y L+H G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 395 KLEEAHQYYMEMKEKQLLP 413
+ E A + +M + L P
Sbjct: 375 QTERARELLSDMVARGLAP 393
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 160/359 (44%), Gaps = 10/359 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y+ MI K + A LI +M P +VT T++ C V
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM---DGLCKSSRV 131
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ F +R ++ LC+ + A + KD+ P ++ S+ I
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP-DSWSYGI 190
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G G EA +++ M GI V+++ +I A L + L LF M+
Sbjct: 191 LIDGLAKA-GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G R +N +I A K + +A L+K M + G P+VVTY++LI LC ++D+A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R ++M++R PT+ T + + + + G +E +L++M G P TY L+
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R Q ++ +++ G P+ +YTAL+ L +L EA + +MK P
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M++R + D S+ +I +KA L+ LF ++ G+ Y ++IH L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA L M +G P+ VTYN +I CK L+EA +M++ G P + TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + EE L M ++GC P ++ +I + + +V++E+
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD SY LI L GKL EA++ + M + + P T
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 15/314 (4%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
++V P ++ S+ I+++G G +A ++ ++ G+ V+++ +I A +
Sbjct: 4 RNVSP-DSWSYGILIDGLAKA-GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LF M R G YN +I A K ++++A L+K M E G P+VVTYN++
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGC 341
+ LCK+ +++EA F+EM + G +P R+++ L + + ++ + M
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P + +Y +LI ++ + +K++ + ++G P +Y +IH + L L+EA +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK-----AHQPQSGQNTRVIS--- 453
+ M+ K P T +L D + ++ LK H P + +IS
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301
Query: 454 --KKSDQDREFLQQ 465
+ D R L+
Sbjct: 302 SIARVDDARHLLED 315
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 153/362 (42%), Gaps = 24/362 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K K + A+ L M PS VT ++I C + + A+ F
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN---VVIHGMCLAYTLDEALELFK 244
Query: 128 AYK-------RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIIL 179
+ + RF F + L+ A C+ + +A L+ D + +++ ++
Sbjct: 245 SMRSKGCRPSRFTFNI-------LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C+I +A + +M +R VV+ + +I KA + + + D M G
Sbjct: 298 SGLCSI-ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D YN ++H + + A L+ M +G+APNVVTY +L+ LCKA +L EA
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGC---QPTNDTYIMLIKKFS 356
F +M G +P + TY A + + +V G L+ +M C P + Y L +
Sbjct: 417 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476
Query: 357 RWRQFGNVFKVWNEISEN--GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + ++ E E+ Y + L GK+E A + +M LP
Sbjct: 477 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPA 536
Query: 415 PK 416
P+
Sbjct: 537 PE 538
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 129/359 (35%), Gaps = 86/359 (23%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G S ++ +I K K D A+ L+ M P +VT T
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST----------- 295
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--- 173
L+S LC V DA HL+ +D+ K
Sbjct: 296 ---------------------------LISGLCSIARVDDARHLL---EDMVKRQCKPTV 325
Query: 174 -SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+ N +++G C G +EA V M G DVV+++ ++ + +A + L
Sbjct: 326 VTQNTLIHGLCK-AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G+ + Y A++ L K + +A + M+ G APN+ TY +LI C A
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAF-------------LDIIRTGEE----------- 328
++D + F EM+ GISP Y L+I+R G E
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV 504
Query: 329 ----VFGLLES------------MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
V GLLE+ M + G P + L+ + Q G V EI
Sbjct: 505 YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 48/288 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I+ L + + D A L+++M + P++VT+ TL I C +
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL---IHGLCKAGRI 341
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A A + + + L+ CR + A L+ + + P N ++
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP-NVVTYTA 400
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G C ++R EA V+ +M G ++ +++ +I + A + L+LF +M
Sbjct: 401 LVSGLCK---ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Query: 236 RMGIECDRKVYNAVIHALAK-GRLVKD--------------------------------- 261
GI D VY + L K GR +
Sbjct: 458 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGK 517
Query: 262 ---AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
A+ ++ M G P SL+ LCK+ + EAR +E++
Sbjct: 518 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 49/104 (47%)
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + P + +Y +LI ++ + + ++ ++ +G P +YT+LIH L +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
++A + + +M + P P T ++ D S + +E +K
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 104
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 183/400 (45%), Gaps = 45/400 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D M P+LVT +++ C
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRG 239
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A N + K + + ++ +LC+Y++ DA +L NK V P N ++
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITY 298
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ CN S +A R+ +M +R I +VV+F+ +I + K L + +L+D+M
Sbjct: 299 SSLISCLCNYERWS-DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D Y+++I+ + +A + + M K PNVVTYN+LI CKA+++D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 296 EARQAFDEMLQRG-----------------------------------ISPTIRTYHAFL 320
E + F EM QRG + P I TY+ L
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + + G E+ + E +++ +PT TY ++I+ + + + + ++ +S G
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD Y +I G EEA + +M+E LP+ T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 24/401 (5%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K++KFD +L ++M+ +L T ILI +C + A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN---ILINCFCRRSQISLAL 140
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F T +
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + M QRG ++V++ +++ K ++ L ++M+
Sbjct: 201 FLHN------KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
IE + +Y+ VI +L K R DA++L ME KGV PNV+TY+SLI LC + +A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M++R I+P + T++A +D ++ G+ E L + M K P TY LI
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + ++ + P+ +Y LI+ +++E + + EM ++ L+
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 415 PKTDELLQDWSY------NKQFVERQIASLKAHQPQSGQNT 449
T L + N Q V +Q+ S H NT
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DAI L M + P++ +N L+ + K +K D ++M + GIS + TY+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ ++ LL M K+G +P+ T L+ + ++ + + +++ E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA M ++ P T
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 13/386 (3%)
Query: 42 RNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ D E+ F LW+ + G + Y+ +++ L + + A++DEM + P
Sbjct: 236 KGDLESGFR--LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDG 293
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
T IL + D ++ F + +G LL+ LC+ + AE +
Sbjct: 294 FTYS---ILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ N + T +N ++NG+C I G A ++ +M R I D ++++ +I+
Sbjct: 351 LQTLVNSGLLQ-TTVIYNTLINGYCQI-GDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K + + L +M++ G+ + +N +I A + ++ ++ M+EKG+ PNV
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNV 468
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLES 335
V+Y S++ CK K+ EA D+M + + P + Y+A +D I G ++ F L E
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M+ G P+ TY +LIK + Q ++ + + G PD SY LI A
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSN 588
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELL 421
+ A + EM + + P P+T +L
Sbjct: 589 TDRALELEKEMWKCGIKPSPRTYRML 614
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 146/318 (45%), Gaps = 14/318 (4%)
Query: 104 QTLLI---LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
QT +I LI YC + D+ A + F K + L++ L + + + +A L
Sbjct: 361 QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDL 420
Query: 161 MF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIIS 216
+ K+ + ++FN +++ + G + + E+ ++ +M ++G+ +VVS+ I++
Sbjct: 421 VIEMEKNGVNPSVETFNTLIDAY----GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ K + + + + D M + +VYNA+I A + A L + M+ GV P
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLL 333
++VTYN LIK LCK ++ EA + D + G++P + +Y+ + + L
Sbjct: 537 SIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELE 596
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ M K G +P+ TY ML + + ++ ++ + P Y ++ A
Sbjct: 597 KEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKC 656
Query: 394 GKLEEAHQYYMEMKEKQL 411
G+ + EM +K +
Sbjct: 657 GEESKVEALRKEMSDKGI 674
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 165/386 (42%), Gaps = 10/386 (2%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
V D + A G A + Y+ +IA L K A L DEM P+
Sbjct: 164 VAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNH 223
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+T T+ I + D+ + R + + LLS LCR + + +
Sbjct: 224 ITYNTM---IDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAV 280
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ ++ + P + +++I+ +G G S+ ++ E ++G+ + S +++
Sbjct: 281 LDEMASRKMVP-DGFTYSILFDGHSRT-GDSQTMLSLFEESVKKGVKIGAYTCSILLNGL 338
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K + K + + G+ +YN +I+ + ++ A S+ + M+ + + P+
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLES 335
+TYN+LI L K ++ EA EM + G++P++ T++ +D R G E+ F +L
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M++ G +P +Y ++ F + + + +++ P Y A+I A G
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELL 421
++A +MK + P T LL
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLL 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 13/270 (4%)
Query: 161 MFCNKDVFPFNTKSFNIILNG-WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
M C+ P N S+N+++ G W G+ +A +++ EM ++ + + ++++ +I +
Sbjct: 178 MGCDGAPAP-NAFSYNVVIAGLW--KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHI 234
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K +L RL+ QM R G++ + YN ++ L + + + +++ M + + P+
Sbjct: 235 KKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGF 294
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLL 333
TY+ L + F+E +++G+ T L+ I EEV L
Sbjct: 295 TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV---L 351
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+++ G T Y LI + + F ++ ++ PD +Y ALI+ L
Sbjct: 352 QTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV 411
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++ EAH +EM++ + P +T L D
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLID 441
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 118/301 (39%), Gaps = 35/301 (11%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
D E AF+ F K Y+ +I LGKV + A L+ EM PS+ T
Sbjct: 377 GDLEGAFSIFQQM-KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435
Query: 103 KQTLLILIRR-------YCAVHDV------------GRAINAFYAYKRFKFAVGIED--- 140
TL+ R + + D+ G +NAF + AV I D
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495
Query: 141 FQGLLSALCRYKNVQDA--------EHLMFCNK---DVFPFNTKSFNIILNGWCNIIGSS 189
+ +L Y + DA + M K P + ++N+++ G C S
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
EAE + + G+ DV+S++ +IS N + L L +M + GI+ + Y +
Sbjct: 556 -EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+L V + +L + M +K V P YN ++ K + + EM +GI
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Query: 310 S 310
+
Sbjct: 675 A 675
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 173/403 (42%), Gaps = 30/403 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A+N F+ + F L++ LCR + +A
Sbjct: 147 PDVVTFNTLL---HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D ++ I++G C G + A + +M + I +VV +S II
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKK-GDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ GI D YN++I DA L++ M E+ ++
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVTYN+LI K K EA + +DEML RGI P TY + +D + E +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 383 FYL---MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
+L G L A EM L P+ T D LL N + +++ L
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A P +G Q ++ + +FL+ E + H+G
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM---IDGFCKQNRLDAAEHMFY 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+ ++
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF-YLV 443
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + EM G+C D+V+ ++ L L +F M++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L + + A AL+D M P+ +T T+ + C D A+N
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI---VDGMCKKGDTVSALNLLR 243
Query: 128 AYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + + ++ +LC+ DA++L K +FP + ++N ++ G+C+
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCS 302
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE++ EM +R I DVV+++ +I+ + K + L+D+M GI +
Sbjct: 303 S-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----- 299
Y+++I K + A + M KG +PN++T+N+LI C A+++D+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 300 ---------------------------AFD---EMLQRGISPTIRTYHAFLD------II 323
A D EM+ G+ P I T LD +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 324 RTGEEVFGLLESMRK--------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+F +++ +K G +P TY +LI +F +++ E+ G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y+++I L +L+EA Q + M K P T
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 11/264 (4%)
Query: 182 WCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C ++G ER ++ +M ++ I D+ SF+ +I C+ L L F ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 141
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G+ D +N ++H L V +A++L M E PNVVT+ +L+ LC+ ++
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTYIML 351
EA D M++ G+ PT TY +D + + L +RKM P Y +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + ++ E+ E G PD +Y ++I +G+ +A Q EM E+++
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 412 LPEPKT-DELLQDWSYNKQFVERQ 434
P+ T + L+ + +F E +
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAE 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 42 RNDWEAA-FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+N +AA F+L A K G + + ++T+I ++ D L+ EM ETG L
Sbjct: 373 QNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT--ETG--L 426
Query: 101 VTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V T LI + V D+ A++ I LL LC ++DA
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 160 LMF-----CNKDV---FPFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
MF KD+ PFN +++NI+++G N G EAE ++ EM RGI
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE-GKFLEAEELYEEMPHRGIVP 544
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++S +I K L + ++FD M + + +I+ K V D + L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M +G+ N +TY +LI K ++ A F EM+ G+ P T L + +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 327 EEV 329
EE+
Sbjct: 665 EEL 667
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F ++ + V+ L+ +M+R I CD + +I + A+S
Sbjct: 79 VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG 138
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G+ P+VVT+N+L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 139 KLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QPT TY ++ + + + ++ E + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I +L +G+ +A + EM+EK + P+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 173/403 (42%), Gaps = 30/403 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A+N F+ + F L++ LCR + +A
Sbjct: 147 PDVVTFNTLL---HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D ++ I++G C G + A + +M + I +VV +S II
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKK-GDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ GI D YN++I DA L++ M E+ ++
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVTYN+LI K K EA + +DEML RGI P TY + +D + E +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 383 FYL---MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
+L G L A EM L P+ T D LL N + +++ L
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A P +G Q ++ + +FL+ E + H+G
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM---IDGFCKQNRLDAAEHMFY 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+ ++
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF-YLV 443
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + EM G+C D+V+ ++ L L +F M++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L + + A AL+D M P+ +T T+ + C D A+N
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI---VDGMCKKGDTVSALNLLR 243
Query: 128 AYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + + ++ +LC+ DA++L K +FP + ++N ++ G+C+
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCS 302
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE++ EM +R I DVV+++ +I+ + K + L+D+M GI +
Sbjct: 303 S-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----- 299
Y+++I K + A + M KG +PN++T+N+LI C A+++D+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 300 ---------------------------AFD---EMLQRGISPTIRTYHAFLD------II 323
A D EM+ G+ P I T LD +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 324 RTGEEVFGLLESMRK--------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+F +++ +K G +P TY +LI +F +++ E+ G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y+++I L +L+EA Q + M K P T
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 11/264 (4%)
Query: 182 WCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C ++G ER ++ +M ++ I D+ SF+ +I C+ L L F ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G+ D +N ++H L V +A++L M E PNVVT+ +L+ LC+ ++
Sbjct: 142 KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTYIML 351
EA D M++ G+ PT TY +D + + L +RKM P Y +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + ++ E+ E G PD +Y ++I +G+ +A Q EM E+++
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 412 LPEPKT-DELLQDWSYNKQFVERQ 434
P+ T + L+ + +F E +
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAE 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 42 RNDWEAA-FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+N +AA F+L A K G + + ++T+I ++ D L+ EM ETG L
Sbjct: 373 QNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT--ETG--L 426
Query: 101 VTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V T LI + V D+ A++ I LL LC ++DA
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 160 LMF-----CNKDV---FPFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
MF KD+ PFN +++NI+++G N G EAE ++ EM RGI
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE-GKFLEAEELYEEMPHRGIVP 544
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++S +I K L + ++FD M + + +I+ K V D + L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M +G+ N +TY +LI K ++ A F EM+ G+ P T L + +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 327 EEV 329
EE+
Sbjct: 665 EEL 667
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F ++ + V+ L+ +M+R I CD + +I + A+S
Sbjct: 79 VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG 138
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G+ P+VVT+N+L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QPT TY ++ + + + ++ E + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I +L +G+ +A + EM+EK + P+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 18/371 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G P+ V ++I C V
Sbjct: 170 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN---MIIDNMCKAKLV 226
Query: 120 GRAINAF--YAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
A + + KR + +DF L+ C +++A L+ +++ P
Sbjct: 227 NDAFDLYSQMVAKR----ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINP-RMY 281
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F+I+++ +C G +EA+ + ++ I DVV+++ ++ Y + ++K +FD
Sbjct: 282 TFSILVDAFCKE-GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDS 340
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+ + + Y +I+ L K ++V +A++L + M + + PNVVTYNSLI L K K
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIM 350
+ + DEM RG P I TY++ LD + V LL +++ G +P TY +
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK + + + KV+ ++ G D +YT +I + G + A +M++
Sbjct: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNG 520
Query: 411 LLPEPKTDELL 421
+P KT E++
Sbjct: 521 CIPNAKTYEIV 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 170/352 (48%), Gaps = 10/352 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I + K + + A+ L +M P T +L I +C + + A+ +
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL---IYGFCIMGQLKEAVGLLH 269
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKSFNIILNGWCNI 185
+ F L+ A C+ V++A+ ++ KD+ + ++N +++G+C +
Sbjct: 270 KMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII-LDVVTYNSLMDGYC-L 327
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A+ ++ M+ RG+ +V S++ +I+ K + + + + LF++M+ I +
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVT 387
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++I L K + + L+ M ++G PN++TYNS++ LCK +D+A +
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLK 447
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+GI P + TY + + ++G E+ + E + G TY ++I+ F F
Sbjct: 448 DQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFD 507
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ +++ +NG P+ +Y +I +LF + + A + EM + LL E
Sbjct: 508 AALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDE 559
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 145/327 (44%), Gaps = 44/327 (13%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
I F +LS+L + K+ A L M N V F T FNI++N + + G + +
Sbjct: 70 IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFT--FNILINCFSQL-GLNSLSFS 126
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ ++ ++G + ++F+ +I ++H+ L D++ G D+ Y +I+ L
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + A+ L+K ++ K V PN V YN +I +CKA+ +++A + +M+ + ISP
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246
Query: 315 TYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR-------------- 357
T ++ + I+ +E GLL M P T+ +L+ F +
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306
Query: 358 ---------------------WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
++ +++ ++ G + SYT +I+ L +
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV 366
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQD 423
+EA + EM+ ++++P T L D
Sbjct: 367 DEAVNLFEEMRCRKIIPNVVTYNSLID 393
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 42/252 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y TMI L K++ D A L +EMR + P++VT +L+ + + + V
Sbjct: 345 GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCV 404
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNI 177
+ ++ + + I + +L ALC+ +V A L+ KD + P + ++ +
Sbjct: 405 LKLVDEMHDRGQ---PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRP-DMYTYTV 460
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G C G +A++V+ ++ +G DV +++ +I +
Sbjct: 461 LIKGLCQ-SGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGF------------------- 500
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
C + +++A A++L+ ME+ G PN TY +I L + + D A
Sbjct: 501 ---CVKGLFDA-------------ALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMA 544
Query: 298 RQAFDEMLQRGI 309
+ EM+ RG+
Sbjct: 545 EKLLREMIARGL 556
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 151/322 (46%), Gaps = 19/322 (5%)
Query: 134 FAVGIED----FQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWC 183
F +G++ F LLS LC + DA L M DV ++T I+NG C
Sbjct: 2 FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYST-----IINGLC 56
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G++ A ++ +M ++G +VV+++ II K R + + + F +M + GI D
Sbjct: 57 KM-GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDV 115
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y++++H V +A SL K M E+ V PN VT+ LI LCK R + EA F+
Sbjct: 116 FTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFET 175
Query: 304 MLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M ++G+ P + TY+A +D + +E L M + GC P +Y +LI + +
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ E+S PD +Y+ L+ G+ +EA + EM LLP T +
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 421 LQDWSYNKQFVERQIASLKAHQ 442
+ D ++ LKA Q
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQ 317
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G+ +V+F+ ++S + ++LFD+M +MG E D Y+ +I+ L K
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
A+ L+K MEEKG PNVV YN++I LCK R + EA F EM++ GI P + TY
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
H F ++ R E L + M + P T+ +LI + R + V+ ++E
Sbjct: 121 ILHGFCNLGRVNEAT-SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G PD +Y AL+ +++EA + + M K P ++ +L
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNIL 226
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 172/414 (41%), Gaps = 45/414 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L K+ A L+ +M P++V T+ I C V
Sbjct: 40 GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTI---IDSLCKDRLV 96
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A++ F + + + +L C V +A L ++V P N +F I
Sbjct: 97 TEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIP-NKVTFTI 155
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C S EA V+ M+++G+ DV +++ ++ Y + + +LF+ M R
Sbjct: 156 LIDGLCKKRMIS-EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + YN +I+ K + +A L+ M K + P++ TY++L++ C+ + EA
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-------------------------------IIRTG 326
++ EM G+ P + TY LD I+ G
Sbjct: 275 QELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334
Query: 327 EEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
FG LE+ R++ G QPT TY ++I + +++ E++ NG P+
Sbjct: 335 MCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+Y +I NG A + EM K + T +L D + + + +
Sbjct: 395 SCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQ 448
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 13/377 (3%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ K+EE G K + + ++ + D A FF K+ G Y +++
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE-GIPPDVFTYSSILHG 124
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
+ + + A +L +M P+ K T ILI C + A F
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPN---KVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ + L+ C + +A+ L + K P N +S+NI++NG C G EA
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP-NVRSYNILINGHCKS-GRIDEA 239
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + EMS + + D+ ++S ++ + + + L +M G+ + Y+ V+
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L K + +A L+K+M+E + PN+ Y LI+ +C KL+ AR+ F + +GI PT
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Query: 313 IRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ TY + + G E L M GC P + TY ++I+ F R N ++
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419
Query: 370 EISENGNGPDRSSYTAL 386
E+ G D S++ L
Sbjct: 420 EMVGKGFSADSSTFRML 436
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 177/418 (42%), Gaps = 46/418 (11%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
I V+S+LV VL N + FF WA Y +T EY ++ L + ++F W
Sbjct: 72 ISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLSYQPTTLEYEELLKTLARTKQFQPMWK 131
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FKFAVGIEDFQGLL 145
+ +M+ P++V+ +I + V +A+ F K IE + LL
Sbjct: 132 IAHQMQ--TLSPTVVSS-----IIEEFGKHGLVDQAVEVFNKAKSALNCPQTIEVYNSLL 184
Query: 146 SALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
ALC K A L+ K V P N +++++++NGWC G +EA+ EMS++G
Sbjct: 185 FALCEVKYFHGAYALIRRMIRKGVTP-NKQTYSVLVNGWC-AAGKMKEAQDFLEEMSRKG 242
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
V ++ A L + +M + G D + N+++ A+ K + I
Sbjct: 243 FNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCI 302
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+ + GV+PNV TY +I CK ++DEA
Sbjct: 303 DIYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEA-------------------------- 336
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
F +L + G +P Y +IK R QF + F ++++ G+ P+R Y
Sbjct: 337 ------FRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFFSDMKVKGHPPNRPVY 390
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN--KQFVERQIASLK 439
T LI G+ +A Y +EM E L P + +++ D N K + R+I L+
Sbjct: 391 TMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLKNCGKHDLARKIEQLE 448
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDR--KVYNAVIHALAKGRLVKDAISLMKSM 269
S II + K + + + +F++ K + C + +VYN+++ AL + + A +L++ M
Sbjct: 145 SSIIEEFGKHGLVDQAVEVFNKAKS-ALNCPQTIEVYNSLLFALCEVKYFHGAYALIRRM 203
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
KGV PN TY+ L+ C A K+ EA+ +EM ++G +P +R +D + +
Sbjct: 204 IRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYL 263
Query: 330 FGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E +RKM GC P +T +++ + + ++N++ G P+ +Y +
Sbjct: 264 EAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLGVSPNVGTYKIM 323
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP-----EPKTDELLQDWSYNKQFVERQIASLKAH 441
I A G+++EA + E P P L ++ ++ F +K H
Sbjct: 324 IPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFFSDMKVKGH 383
Query: 442 QPQSGQNTRVIS 453
P T +I+
Sbjct: 384 PPNRPVYTMLIT 395
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 27/384 (7%)
Query: 45 WEAAFTFF---LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
WE A F L G Q S+ +I +L K K A L++ + P +V
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSS----VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL- 160
T TL ++ C H + +A F ++ + L+ LC+ N++ A L
Sbjct: 409 TCTTL---VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465
Query: 161 --MFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
M + + N K S++II++G C G EA ++ EM G+ DV+S++ +
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKC-GREDEARELFKEMKALGVIPDVISYTSL 524
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I + ++ LF++M +G++ D ++ +I L K V +A L++ M ++G
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
PN VTY +L+K LC ++ EA Q F +M + G P + TY + + + LE
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644
Query: 335 SMRKM---------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+KM +P +Y ++I + + +++ E+ G P+ SYT+
Sbjct: 645 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 704
Query: 386 LIHALFLNGKLEEAHQYYMEMKEK 409
LIH +GKLE+A + EM ++
Sbjct: 705 LIHGFCRSGKLEDAKHLFNEMVDQ 728
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 17/336 (5%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNK 165
LI+ C H + A F + K+ + L+ LC+ + A HL M +
Sbjct: 51 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 110
Query: 166 DVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+ K S++II++G C EA ++ EM +G+ DV+S++ +I + ++
Sbjct: 111 SQYGIKCKPTLVSYSIIIDGLCKD-RREDEARELFKEMKAQGMMPDVISYTSLIHGFCRS 169
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
K LF++M +GI D + +I L K V +A L++ M ++G ++VTY
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGL------LE 334
++LIK LC ++ EA + F M + G P Y + + +TG L L
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289
Query: 335 SMRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+ G C+PT +Y ++I + R+ +++ E+ G PD SYT LIH L
Sbjct: 290 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCL 349
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+GK E+A + EM + + P+ T +L D K
Sbjct: 350 SGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 385
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 177/399 (44%), Gaps = 27/399 (6%)
Query: 45 WEAAFTFF---LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
WE A F L G +S S+ +I IL K K A L++ M +V
Sbjct: 172 WEKAKCLFNEMLDVGIRSDVTTSS----MLIDILCKEGKVIEANELLEVMIQRGCILDIV 227
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL- 160
T TL I+ C H + A F + ++ + L+ LC+ N+ A L
Sbjct: 228 TYSTL---IKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284
Query: 161 --MFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
M + + K S++II++G C EA ++ EM +GI DV+S++ +
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKD-RREDEARELFKEMKAQGIMPDVISYTTL 343
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I + + K LF++M +GI+ D + +I L K V +A L++ + ++G
Sbjct: 344 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 403
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
P+VVT +L+K LC ++ +A Q F +M + G P + T + + + LE
Sbjct: 404 IPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 463
Query: 335 SMRKM---------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ M C+P +Y ++I + + +++ E+ G PD SYT+
Sbjct: 464 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
LIH +GK ++A + EM + + P+ T +L D
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 44/264 (16%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G EA + M QRG D+V++S +I + + +LF MK++
Sbjct: 24 GKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 83
Query: 238 ------------------------------GIECDRKV--YNAVIHALAKGRLVKDAISL 265
GI+C + Y+ +I L K R +A L
Sbjct: 84 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAREL 143
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-R 324
K M+ +G+ P+V++Y SLI C++ K ++A+ F+EML GI + T +DI+ +
Sbjct: 144 FKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCK 203
Query: 325 TGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G+ E LLE M + GC TY LIK + +++ + + G PD +
Sbjct: 204 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIA 263
Query: 383 YTALIHALFLNGKLEEAHQYYMEM 406
Y L+ L G + A Q + EM
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEM 287
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 21/265 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K + D A L EM+ P +++ +L I +C G+ +A Y
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL---IHGFCRS---GKWKDAKY 539
Query: 128 AYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
+ +G++ F L+ LC+ V +A L+ + P NT ++ ++ G
Sbjct: 540 LFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-NTVTYTTLVKG 597
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR----- 236
C + EA +++M+M + G DVV++ ++ + N+ L L +M
Sbjct: 598 LC-MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656
Query: 237 -MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ D Y+ +I L K +A L K M+ GV PNV++Y SLI C++ KL+
Sbjct: 657 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 716
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL 320
+A+ F+EM+ +G+ TY +
Sbjct: 717 DAKHLFNEMVDQGVQLNAVTYSVMI 741
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M +GI+ D +I K V +A L++ M ++G ++VTY++LIK LC +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGL------LESMRKMG--CQPT 344
+ EA Q F M + G P Y + + +TG+ L L + G C+PT
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y ++I + R+ +++ E+ G PD SYT+LIH +GK E+A +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 405 EMKEKQLLPEPKTDELLQD 423
EM + + + T +L D
Sbjct: 181 EMLDVGIRSDVTTSSMLID 199
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M GI DV + +I + K + + L + M + G D Y+ +I L
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML----QRGI--SPT 312
+ +A L SM++ G P+ + Y +L+K LC+ K++ A EML Q GI PT
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 313 IRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ +Y +D + R +E L + M+ G P +Y LI F R ++ ++N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
E+ + G D ++ + LI L GK+ EA++
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANE 212
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + +I +L K K A L++ M P+ VT TL ++ C +
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL---VKGLCMNDRI 604
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK--- 173
A F ++ + + L+ LC+ N++ A L M + + N K
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664
Query: 174 -SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
S++II++G C G EA ++ EM G+ +V+S++ +I + ++ L LF+
Sbjct: 665 ISYSIIIDGLCKH-GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723
Query: 233 QMKRMGIECDRKVYNAVIHALAK 255
+M G++ + Y+ +IH K
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCK 746
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
LI+ C ++ A FY K IE LLS + N +A +++ ++F
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKL-NRTEAAWVLYA--EMF 213
Query: 169 PFNTKS----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
KS FNI++N C G ++A+ M G+ ++V+++ I+ Y + +
Sbjct: 214 RLRIKSSVYTFNIMINVLCK-EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ MKR IE D Y ++I + K +++A + + M +KG+ P+ V YN+L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
I C LD A DEML++GISPT+ TY++ + + + +E +++ +++ G
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI + R F + +E+ +G P + +YT+L+H L +++EA
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 402 YYMEMKEKQLLPE 414
+ ++ + +LP+
Sbjct: 453 LFKKITSEGVLPD 465
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 43/393 (10%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ MI +L K K A + M P++VT T+ + YC+ V A
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI---VHGYCSSGRVEAAD 276
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
KR K + L+S +C+ +++A + K + P + +N +++G
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP-SAVIYNTLIDG 335
Query: 182 WCN----------------------------IIGS------SREAERVWMEMSQRGICYD 207
+CN +I + + EAE + E+ ++GI D
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ +I+ Y + N K L D+M GI+ +K Y +++H L+K +K+A L K
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ +GV P+ + +N+LI C + A + +M + + P T++ + R G
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE L + M++ G +P + ++ LI +SR + F+V NE+ + G P +Y
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL+ L N + + A + EM K + P+ T
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 170/377 (45%), Gaps = 11/377 (2%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
N + AF F + K+ G + ++++++ K+ + + AW L EM S+ T
Sbjct: 165 NRADEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
I+I C + +A + + I + ++ C V+ A+ ++
Sbjct: 224 FN---IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 163 CNK--DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
K + P ++ ++ +++G C G EA +++ EM Q+G+ V ++ +I +
Sbjct: 281 TMKRQKIEP-DSFTYGSLISGMCKQ-GRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
NL D+M + GI YN++IHAL + +A ++K ++EKG++P+ +T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
YN LI C+ +A DEML GI PT +TY + L ++ +E L + +
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G P + LI F++ ++ PD ++ ++ GK+E
Sbjct: 459 SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 398 EAHQYYMEMKEKQLLPE 414
EA + + EMK + + P+
Sbjct: 519 EARELFDEMKRRGIKPD 535
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 15/272 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + + Y+++I L ++ D A +I E++ P +T ILI YC
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN---ILINGYCRC- 409
Query: 118 DVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
A AF + A GI+ + LL L + +++A+ L ++ V P +
Sbjct: 410 --ANAKKAFLLHDEM-LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP-D 465
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
FN +++G C+ + + A + +M + + D V+F+ I+ + + + + LF
Sbjct: 466 AIMFNALIDGHCSN-SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+MKR GI+ D +N +I ++ +KDA + M + G P V+TYN+L++ LCK
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
++ D A + EM+ +G++P TY ++ I
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+ ++ C++ + EA + M ++G+ + + + ++S + K L+ +M
Sbjct: 154 FDYLIKSCCDM-NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R+ I+ +N +I+ L K +K A + ME GV PN+VTYN+++ C + ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+ A M ++ I P TY + + + + G EE + E M + G +P+ Y L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I F +E+ + G P S+Y +LIHALF+ + +EA E++EK +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 412 LPEPKTDELL 421
P+ T +L
Sbjct: 393 SPDAITYNIL 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 17/251 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+ +I + A+ L DEM P+ T +LL ++ +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK--- 444
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDV----FP 169
R A +K+ + D F L+ C NV+ A L+ KD+ P
Sbjct: 445 ---NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL---KDMDRMKVP 498
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +FN I+ G C G EA ++ EM +RGI D +SF+ +IS YS+ ++ R
Sbjct: 499 PDEVTFNTIMQGHCRE-GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ ++M G YNA++ L K + A L+K M KG+ P+ TY +LI+ +
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617
Query: 290 KARKLDEARQA 300
K DE +
Sbjct: 618 KVNIPDENKNT 628
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++ +I + +A +M+EKGV P + T NSL+ K + + A + EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 305 LQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ I ++ T++ ++++ + ++ G +E+ G +P TY ++ +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS---GVKPNIVTYNTIVHGYCSS 269
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + PD +Y +LI + G+LEEA + + EM +K L P
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 419 ELLQDWSYNK 428
L D NK
Sbjct: 330 NTLIDGFCNK 339
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 173/403 (42%), Gaps = 30/403 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A+N F+ + F L++ LCR + +A
Sbjct: 147 PDVVTFTTLL---HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D ++ I++G C G + A + +M + I +VV +S II
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKK-GDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ GI D YN++I DA L++ M E+ ++
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVTYN+LI K K EA + +DEML RGI P TY + +D + E +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 383 FYL---MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
+L G L A EM L P+ T D LL N + +++ L
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A P +G Q ++ + +FL+ E + H+G
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM---IDGFCKQNRLDAAEHMFY 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+ ++
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF-YLV 443
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + EM G+C D+V+ ++ L L +F M++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L + + A AL+D M P+ +T T+ + C D A+N
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI---VDGMCKKGDTVSALNLLR 243
Query: 128 AYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + + ++ +LC+ DA++L K +FP + ++N ++ G+C+
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCS 302
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE++ EM +R I DVV+++ +I+ + K + L+D+M GI +
Sbjct: 303 S-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----- 299
Y+++I K + A + M KG +PN++T+N+LI C A+++D+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 300 ---------------------------AFD---EMLQRGISPTIRTYHAFLD------II 323
A D EM+ G+ P I T LD +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 324 RTGEEVFGLLESMRK--------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+F +++ +K G +P TY +LI +F +++ E+ G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y+++I L +L+EA Q + M K P T
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 182 WCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C ++G ER ++ +M ++ I D+ SF+ +I C+ L L F ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G+ D + ++H L V +A++L M E PNVVT+ +L+ LC+ ++
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTYIML 351
EA D M++ G+ PT TY +D + + L +RKM P Y +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + ++ E+ E G PD +Y ++I +G+ +A Q EM E+++
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 412 LPEPKT-DELLQDWSYNKQFVERQ 434
P+ T + L+ + +F E +
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAE 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 42 RNDWEAA-FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+N +AA F+L A K G + + ++T+I ++ D L+ EM ETG L
Sbjct: 373 QNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT--ETG--L 426
Query: 101 VTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V T LI + V D+ A++ I LL LC ++DA
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 160 LMF-----CNKDV---FPFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
MF KD+ PFN +++NI+++G N G EAE ++ EM RGI
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE-GKFLEAEELYEEMPHRGIVP 544
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++S +I K L + ++FD M + + +I+ K V D + L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M +G+ N +TY +LI K ++ A F EM+ G+ P T L + +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 327 EEV 329
EE+
Sbjct: 665 EEL 667
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F ++ + V+ L+ +M+R I CD +N +I + A+S
Sbjct: 79 VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFG 138
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G+ P+VVT+ +L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QPT TY ++ + + + ++ E + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I +L +G+ +A + EM+EK + P+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTY 348
+ L++A F +ML+ P++ + + ++ E V L + M + + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LIK F + + +I++ G PD ++T L+H L + ++ EA + +M E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 409 KQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
P T L + + + +A L Q T++
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 187/411 (45%), Gaps = 51/411 (12%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
T L + S +A + E + G + + AL + + ETG S T+ T+ +L
Sbjct: 213 TAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCS-PTRVTVNVL 271
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFC-- 163
I YC + GR +A Y + + A G E + + LC+ +V A +M
Sbjct: 272 INGYCKM---GRVEDAL-GYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLML 327
Query: 164 ----NKDVFPFNT------------------------------KSFNIILNGWCNIIGSS 189
+ DVF +NT +FN ++ C+
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ-NRL 386
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
EA + E++ +G+ DV +F+ +I+ K + H +RLF++MK G D YN +
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446
Query: 250 I-HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
I H + G+LV +A+ L+K ME G + VTYN++I LCK +++EA + FD+M G
Sbjct: 447 IDHLCSMGKLV-NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
IS + T++ +D + + ++ L+E M K G QP+N TY ++ + +
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAA 565
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ NG D +Y LI+ L G+ + A + M+ K + P PK
Sbjct: 566 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 616
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 173/392 (44%), Gaps = 19/392 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G+ Y+T+I L K + D A ++++M P T TL++ + C+ +
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL---CSQN 384
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+ A++ + + F L++ALC+ + L C D
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEV--- 441
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++NI+++ C++ G A + EM G V+++ II K + + +F
Sbjct: 442 --TYNILIDHLCSM-GKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
DQM GI +N +I L K + + DA L++ M ++G+ P+ +TYNS++ CK
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
L +A + M G + TY ++ + + G + LL MR G +PT Y
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEAHQYYMEMK 407
+I+ R + ++ E++E G PD +Y + L G ++EA + +EM
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV 678
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
K +PE + +L + N + I++++
Sbjct: 679 NKGFMPEFSSFRMLAEGLLNLGMDDYLISAIE 710
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 158/388 (40%), Gaps = 15/388 (3%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPSLV 101
D EAA A + +A S Y +I LG FD L+ EMR G E G +V
Sbjct: 68 DPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVV 127
Query: 102 TKQTLLILIRRYCAVHDVGRAINAF-YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ Y + A++ F + LL+ L ++ E +
Sbjct: 128 RS-----FVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESV 182
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
++ + P + + N ++ C R A + EMS + D +F+ ++ +
Sbjct: 183 YNEMTDRGIQP-DVVTLNTLIKALCRA-HQVRTAVLMLEEMSSHAVAPDETTFTTLMQGF 240
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ ++ LR+ +M G R N +I+ K V+DA+ ++ G P+
Sbjct: 241 IEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQ 300
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLES 335
VTYN+ + LC+ + A + D MLQ G P + TY+ ++ + + GE E G++
Sbjct: 301 VTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 360
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M GC P T+ LI + + E++ G PD ++ LI+AL G
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + EMK P+ T +L D
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILID 448
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 177/413 (42%), Gaps = 13/413 (3%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTR 66
LR F +RN++ G++ + + + +L+ + ++ G
Sbjct: 137 LRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVV 196
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+T+I L + + TA +++EM P T TL+ ++ R
Sbjct: 197 TLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM 256
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
V + L++ C+ V+DA L + K++ F + ++N ++ C
Sbjct: 257 METGCSPTRVTV---NVLINGYCKMGRVEDA--LGYIQKEIADGFEPDQVTYNTFVHCLC 311
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G A +V M Q G DV +++ +I+C SK L + + +QM G D
Sbjct: 312 QN-GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N +I AL +++A+ L + + KG++P+V T+N LI LCK + F+E
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430
Query: 304 MLQRGISPTIRTYHAFLD-IIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M G +P TY+ +D + G+ V LL+ M GC + TY +I + +
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+V++++ +G ++ LI L ++++A + +M ++ L P
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 43/270 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG A Y+ +I L + K A L+ EM S VT T++ + + +
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ + A+ + AV F L+ LC+ K + DA L+ + + P N +
Sbjct: 492 EEAEEVFDQMDAHGISRSAV---TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI-T 547
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N IL +C G ++A + M+ G DVV++ +I+ KA L+L M
Sbjct: 548 YNSILTHYCKQ-GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606
Query: 235 KRMGIECDRKVYNAVIHALAK------------------------------------GRL 258
+ GI K YN VI +L + G
Sbjct: 607 RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP 666
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+K+A + M KG P ++ L + L
Sbjct: 667 IKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 17/372 (4%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYA--HSTREYHTMIAILGKVRKFDTAWALIDEM--RGG 94
+ R+ AA + F + S A + Y +I + + D +A + + +G
Sbjct: 70 AVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGY 129
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAIN-AFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
P + T L++ CA A+N A + + LL LC
Sbjct: 130 RVEPIIFTP-----LLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESR 184
Query: 154 VQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
Q+A H+M + P + S++ I++G G S +A + EM +RGI DVV+
Sbjct: 185 SQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE-GDSDKAYSTYHEMLERGILPDVVT 243
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ I++ KA+ + K + + ++M + G+ D YN+++H K+AI +++ M
Sbjct: 244 YNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMC 303
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE--- 327
GV P+ VTY SL+ LCK + EAR+ D M++RG+ P + TY L T
Sbjct: 304 SDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALV 363
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E+ LL+ M + G QP + +LI ++ + V++++ + PD +Y LI
Sbjct: 364 EMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLI 423
Query: 388 HALFLNGKLEEA 399
L +G++++A
Sbjct: 424 DGLCKSGRVDDA 435
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 16/310 (5%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F LL +LC K +A +++ C VF S+NI+L G C+ S E
Sbjct: 136 FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVF-----SYNILLKGLCHESRSQEALE 190
Query: 194 RVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M G C DVVS+S II K + K + +M GI D YN ++ A
Sbjct: 191 LLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAA 250
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L K + + A+ ++ M + GV P+ +TYNS++ C + + EA ++M G+ P
Sbjct: 251 LCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPD 310
Query: 313 IRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
TY + +D + + G E +L+SM K G +P TY L+ ++ + + +
Sbjct: 311 AVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLD 370
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
+ NG PDR ++ LI A + ++ A + +M++++L P+ T L D
Sbjct: 371 LMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSG 430
Query: 430 FVERQIASLK 439
V+ + +L+
Sbjct: 431 RVDDAMLNLE 440
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRT--YHAFLD 321
M + V P + TY LI C+A +LD ++++G + P I T +
Sbjct: 86 MARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCA 145
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PD 379
RT + +L M ++GC P +Y +L+K + ++ + ++++G PD
Sbjct: 146 EKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPD 205
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
SY+ +I LF G ++A+ Y EM E+ +LP+ T
Sbjct: 206 VVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVT 243
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 13/367 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T++ L + K A AL++ M P LVT + I C
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV---INGLCKRG 229
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+N ++ K + + ++ LC+YK++ DA L K + P + ++
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVFTY 288
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++ CN G +A R+ +M ++ I D+V F+ +I + K L + +L+D+M
Sbjct: 289 NPLISCLCNY-GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 236 RMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ C D YN +I K + V++ + + + M ++G+ N VTY +LI +AR
Sbjct: 348 K-SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
D A+ F +M+ G+ P I TY+ LD + G E + E M+K + TY
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I+ + + + + ++ +S G P+ +YT ++ G EEA ++EMKE
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 411 LLPEPKT 417
LP T
Sbjct: 527 PLPNSGT 533
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 179/386 (46%), Gaps = 13/386 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ +++ + K+ KFD +L ++M+ +L T I I +C + A+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS---IFINYFCRRSQLSLAL 130
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGW 182
+ + I LL+ C + +A L+ ++ + +T +F +++G
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG- 189
Query: 183 CNIIGSSREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ ++ +E V + M +G D+V++ +I+ K L L ++M++ IE
Sbjct: 190 --LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +YN +I L K + + DA L ME KG+ P+V TYN LI LC + +A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMG-CQPTNDTYIMLIKKFS 356
+ML++ I+P + ++A +D ++ G+ E L + M K C P Y LIK F
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++++ +V+ E+S+ G + +YT LIH F + A + +M + P+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 417 TDELLQDWSYNKQFVERQIASLKAHQ 442
T +L D N VE + + Q
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQ 453
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 159/338 (47%), Gaps = 12/338 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + D A+ L ++M P + T L+ + Y D R ++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+ F L+ A + + +AE L M +K FP + ++N ++ G+C
Sbjct: 313 EKN---INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCK 368
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
E V+ EMSQRG+ + V+++ +I + +AR+ +F QM G+ D
Sbjct: 369 Y-KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++ L V+ A+ + + M+++ + ++VTY ++I+ LCKA K+++ F +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+G+ P + TY + R G EE L M++ G P + TY LI+ R
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
++ E+ G D S++ L+ + +G+L+++
Sbjct: 548 AASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS 584
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DAI L M + P++V ++ L+ + K K D ++M GIS + TY
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F++ ++ +L M K+G P+ T L+ F + + +++ E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T L+H LF + K EA M K P+ T
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 23/381 (6%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
+ WV WE +SG + + MI L K +K + + + +M
Sbjct: 232 VGWVDLAWE-----IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVF 286
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC------RY 151
P +VT TL I YC + A + + + +++ LC R
Sbjct: 287 PDVVTYNTL---INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 343
Query: 152 KNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
K V D + + D T ++NI+L C + +AER++ EM +G+ D+VSF
Sbjct: 344 KGVLDEMLKIGMSPD-----TATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSF 397
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S +I SK L + L+ F MK G+ D +Y +I + ++ +A+ + M E
Sbjct: 398 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
+G +VVTYN+++ LCK + L EA + F EM +RG+ P T+ ++ + G +
Sbjct: 458 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 517
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L E M + +P TY LI F + + V ++WN++ P+ SY LI+
Sbjct: 518 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 577
Query: 389 ALFLNGKLEEAHQYYMEMKEK 409
G + EA + + EM EK
Sbjct: 578 GYCNMGCVSEAFRLWDEMVEK 598
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
RE + + +G+C + + + ++ K + ++ ++ R G++ + N +
Sbjct: 201 REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIM 260
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+AL K + +++ S + MEEKGV P+VVTYN+LI C+ L+EA + D M +G+
Sbjct: 261 INALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGL 320
Query: 310 SPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY+A ++ + +TG+ G+L+ M K+G P TY +L+ + R + +
Sbjct: 321 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 380
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++E+ G PD S++ALI L NG L++A +Y+ +MK L P+
Sbjct: 381 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 170/401 (42%), Gaps = 53/401 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+ ++ + A + DEM P LV+ L+ L+ + +
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD-- 411
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK------NVQDAEHLMFCNKDVFPFNTK 173
+A+ F K A + L+ CR V+D C DV +NT
Sbjct: 412 -QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT- 469
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
ILNG C S EA+ ++ EM++RG+ D +F+ +I+ YSK N++K + LF+
Sbjct: 470 ----ILNGLCKEKMLS-EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524
Query: 234 MKRMGIECDRKVYNAVIHALAKGR-----------------------------------L 258
M + ++ D YN +I KG
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A L M EKG ++T N+++K C+A +A + ML +GI P TY+
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ E + F L+ M G P TY +++ FSR + + ++ E G
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
PDRS+YT+LI+ L+EA + + EM ++ +P+ K
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 168/417 (40%), Gaps = 56/417 (13%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLL----------- 107
+ HS + + MI IL + R+ A A+I M + G + +V L
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 108 -ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNK 165
+L+R Y + AF K V I LL L + V A E +
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNL 224
N + NI++N C E + ++ +M ++G+ DVV+++ +I+ Y + L
Sbjct: 248 SGVQVNVYTLNIMINALCK--NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 305
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ L D M G++ YNA+I+ L K A ++ M + G++P+ TYN L
Sbjct: 306 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGC 341
+ C+ + +A + FDEM +G+ P + ++ A + ++ ++ M+ G
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 425
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG------------NG------------ 377
P N Y +LI F R KV +E+ E G NG
Sbjct: 426 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 485
Query: 378 -----------PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD ++T LI+ +G + +A + M ++ L P+ T L D
Sbjct: 486 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 8/389 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI L K KFD ++ + M+ E G L T TL I C ++ A +
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSGNLDGATRVYK 314
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + + +L+ R +++ L + S+NI++ G
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN-A 373
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA +W + ++ C D +++ ++ K L+K L + ++ + + D Y+
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 433
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I+ L + + + ++ M + G PN N++I +A KL++A + F M+ +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493
Query: 308 GISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G PT+ TY+ ++ + E E + L++ M G +P TY +L+ + ++
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+W + E G PD + +IH L +GK+E+A Q Y EMK+++ +P T L +
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Query: 425 SYNKQFVERQIASLKAHQPQSGQNTRVIS 453
Y + ER + + H Q G +IS
Sbjct: 614 FYKVRDFERA-SKIWDHILQYGPQPDIIS 641
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+T +++ ++NG C G E V +M++ G + + +I+ + +A L LR
Sbjct: 427 LDTFAYSSMINGLCRE-GRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F M G YN +I+ L+K +A +L+K M KG PN++TY+ L+ LC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTND 346
+ +KLD A + + L++G P ++ ++ + + +G E+ L M++ C P
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLV 605
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
T+ L++ F + R F K+W+ I + G PD SY + L ++ +A + +
Sbjct: 606 THNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDA 665
Query: 407 KEKQLLPEPKTDELL 421
++ +LP T +L
Sbjct: 666 VDRGVLPTAITWNIL 680
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
S++ +++ ++ + F + MG+ + + YN +I + + A L+ M
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
E+G +P+V +Y +LI L K + +A + FDEM +RG++P + Y+ +D ++
Sbjct: 176 WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 235
Query: 330 FGLLESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E ++ P +Y ++I + +F F++W+ + +N G D +Y+
Sbjct: 236 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 295
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
LIH L +G L+ A + Y EM E + P+
Sbjct: 296 LIHGLCGSGNLDGATRVYKEMAENGVSPD 324
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+++ R ++DA +K FP ++N ++NG S EA + EM
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFS-EAYALVKEM 525
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+G +++++S +++ + + L L L+ Q G + D K++N +IH L V
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+DA+ L M+++ PN+VT+N+L++ K R + A + +D +LQ G P I +Y+
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645
Query: 320 LDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
L + + + G L G PT T+ +L++
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVR 682
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMKSME-E 271
+I +N H L +FD + R G V++ ++ L +LV +++ + +
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR-GISPTIRTYHAFLDIIRTG---E 327
K P V ++IK K D+A F M + G P IR+Y++ L+ + +
Sbjct: 73 KCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E MG P TY +LIK R +QF ++ N + E G PD SY LI
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
++L NG + +A + + EM E+ + P+ +L D + K
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQ-RGISPTIRTYHAFLDII---RTGEEVF 330
AP ++ +IK L + A FD + + G S T +H L + + V
Sbjct: 4 APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHA 389
++E +R C+ D + +IK +++ ++ + E G P SY +L++A
Sbjct: 64 RIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
L + K +EA +++ + L P +T +L S K+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKK 163
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 15/340 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
TL I+I +C A + + + F L+ L V +A L+
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C DV +N+ I+NG C G + A + +M +R + DV ++S II
Sbjct: 175 VENGCQPDVVTYNS-----IVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + + LF +M+ GI+ YN+++ L K D L+K M + + PNV
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
+T+N L+ K KL EA + + EM+ RGISP I TY+ +D + E +L+
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + C P T+ LIK + ++ + KV+ IS+ G + +Y+ L+ +GK
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
++ A + + EM +LP+ T +L D + +E+ +
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 47/405 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL------------- 106
GY T ++T+I L K A L+D M P +VT ++
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 107 LILIRR------------YCAVHD-------VGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
L L+R+ Y + D + AI+ F + + + L+
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ D L+ ++++ P N +FN++L+ + G +EA ++ EM RGI
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKE-GKLQEANELYKEMITRGIS 320
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++++++ ++ Y L + + D M R D + ++I + V D + +
Sbjct: 321 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 380
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+++ ++G+ N VTY+ L++ C++ K+ A + F EM+ G+ P + TY LD +
Sbjct: 381 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 440
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E+ + E ++K Y +I+ + + + + ++ + G P+ +
Sbjct: 441 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 500
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I L G L EA+ +M+E P D +YN
Sbjct: 501 YTVMISGLCKKGSLSEANILLRKMEEDGNAP--------NDCTYN 537
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ + K K A L EM P+++T TL+ YC + + A N
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM---DGYCMQNRLSEANNMLD 347
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
R K + I F L+ C K V D + +K N +++I++ G+C
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS- 406
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + AE ++ EM G+ DV+++ ++ L K L +F+ +++ ++ +Y
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 466
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + KG V+DA +L S+ KGV PNV+TY +I LCK L EA +M +
Sbjct: 467 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLI 352
G +P TY+ + +R G+ L+E M+ G + M+I
Sbjct: 527 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
TK FN++L+ +C ++ GI +++ + + +I+C+ + +
Sbjct: 91 TKQFNLVLD-FCK-------------QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++ ++G E D +N +I L V +A+ L+ M E G P+VVTYNS++ +C++
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 196
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
A +M +R + + TY +D + R G + L + M G + + TY
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 256
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L++ + ++ + + ++ P+ ++ L+ GKL+EA++ Y EM
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316
Query: 409 KQLLPEPKTDELLQD 423
+ + P T L D
Sbjct: 317 RGISPNIITYNTLMD 331
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM + +V FS S ++ + + VL Q++ GI + N +I
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + A S++ + + G P+ T+N+LIK L K+ EA D M++ G
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY++ ++ I R+G+ LL M + + TY +I R +
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ G +Y +L+ L GK + +M ++++P T +L D
Sbjct: 241 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 240 ECDRKV-----YNAVIHALAKGRL--------VKDAISLMKSMEEKGVAPNVVTYNSLIK 286
ECD V +AV +A GR+ V A L K M ++G+APN +TY+SLI
Sbjct: 683 ECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLID 742
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG 331
CK +LDEA Q D M+ +G S + R G E G
Sbjct: 743 GFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMRKKRKGSETEG 787
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 4/244 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT S+NII + C + G EA ++ ++M RG DV+S+S +I+ Y + L +VL+L
Sbjct: 252 NTASYNIITHSLCQL-GRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M+ G++ + YN VI L K V +A +++ M +G+AP+ V Y +LI CK
Sbjct: 311 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDT 347
+ A + FDEM +R ISP TY A + + +TG E L M +P T
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI + + + F + N++ + G P+ +YTAL L G+++ A++ EM
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490
Query: 408 EKQL 411
K L
Sbjct: 491 RKGL 494
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 177/383 (46%), Gaps = 19/383 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+ +I +L K K A ++ EM P V TL I +C + +V
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL---IDGFCKLGNV 374
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFN 176
A F ++ K + + ++ LC+ V +A+ H M C + + ++
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR--LEPDEVTYT 432
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G+C G +EA + +M Q G+ ++V+++ + K + L +M R
Sbjct: 433 ALIDGYCKE-GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+E + YN++++ L K + A+ LMK ME G P+ VTY +L+ CK+R++
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
A + +ML R + PT+ T++ ++ ++ GE+ LL+ M + G P TY
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK---LLKWMLEKGIMPNATTYNS 608
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK++ +++ + G PD ++Y LI ++EA + +M K
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Query: 411 L-LPEPKTDELLQDWSYNKQFVE 432
L + L++ + K+F+E
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLE 691
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 159/395 (40%), Gaps = 39/395 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI----------- 108
G A Y T+I K+ +A+ L DEM+ + P +T ++
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412
Query: 109 ---------------------LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
LI YC + A + + I + L
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ V A L+ C K + N ++N ++NG C G+ +A ++ +M G
Sbjct: 473 LCKCGEVDTANELLHEMCRKGL-ELNIYTYNSLVNGLCKA-GNIDQAVKLMKDMEVAGFH 530
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D V+++ ++ Y K+R + + L QM ++ +N +++ +++D L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---I 322
+K M EKG+ PN TYNSLIK C + + + M +G+ P TY+ +
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R +E + L M G T +Y LIK F + ++F +++ ++ G DR
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
Y + GK+E + E EK L+ + +T
Sbjct: 711 YNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y + L K + DTA L+ EM ++ T +L + C
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL---VNGLCKAG 512
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ +A+ + F + L+ A C+ + + A L+ ++++ P +F
Sbjct: 513 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP-TVVTF 571
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C + G + E++ M ++GI + +++ +I Y N+ ++ M
Sbjct: 572 NVLMNGFC-MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 630
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L + M KG V +YN+LIK K +K
Sbjct: 631 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 690
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F++M + G+ Y+ F DI
Sbjct: 691 EARELFEQMRREGLVADREIYNIFADI 717
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 41/189 (21%)
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF----- 319
L+ + ++ G P V ++ + L +A LDEAR+ FD+ML G+ ++ + + F
Sbjct: 171 LIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLS 228
Query: 320 --LDIIRTGEEVF--------------------------------GLLESMRKMGCQPTN 345
LD I+ +VF LL M GC P
Sbjct: 229 EDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+Y +I + + + V K+ E+ G P+ +Y +I L GK+ EA + E
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 406 MKEKQLLPE 414
M + + P+
Sbjct: 349 MISEGIAPD 357
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 205/490 (41%), Gaps = 91/490 (18%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND-----WEAAFTFFLWAGKQSGYA 62
L+ F + N+++ G++ ++E+ + +L+ + E+A+T G
Sbjct: 138 LQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEM----SSQGIE 193
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--------------- 107
++T+I L + R+ TA +++EM + P T TL+
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253
Query: 108 -----------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLS 146
+LI YC + VG A+ Y + + A G E F ++
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL----GYIQQEIADGFEPDRVTFSTFVN 309
Query: 147 ALCRYKNVQDAEHLMF------CNKDVFPF------------------------------ 170
LC+ +V A ++ C DV+ +
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T +FN ++ C EA + E++ +G+ +V +F+ +I+ K + H +RL
Sbjct: 370 DTTTFNTLIVALCTE-NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428
Query: 231 FDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F++MK G D YN +I L + G+L K A+ L+K ME G + VTYN++I LC
Sbjct: 429 FEEMKSSGCTPDEVTYNILIDNLCSSGKLAK-ALDLLKEMEVSGCPQSTVTYNTIIDGLC 487
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTND 346
K R+++EA + FD+M GI T++ +D + E + L++ M G QP N
Sbjct: 488 KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++ + + + ++ NG D +Y LI+ L + + A + M
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607
Query: 407 KEKQLLPEPK 416
+ K + P PK
Sbjct: 608 RMKGMKPTPK 617
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ ALC +++A L K + P N +FNI++N C + G A R++ E
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSP-NVYTFNILINALCKV-GDPHLAVRLFEE 431
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G D V+++ +I + L K L L +M+ G YN +I L K R
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+++A + M+ G+ N +T+N+LI LC A ++D+A + D+M+ G+ P TY++
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 319 FL-------------DIIRT----GEEV---------------------FGLLESMRKMG 340
L DI++T G EV LL MR G
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKLEEA 399
+PT Y +I+ R + ++ E++E G PD +Y + L G ++EA
Sbjct: 612 MKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEA 671
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ +EM + +PE + +L + N
Sbjct: 672 FDFLVEMADNGFIPEFSSFRMLAEGLLN 699
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG T ++T+I L + + A L E+ P++ T ILI C V D
Sbjct: 365 SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFN---ILINALCKVGD 421
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKS 174
A+ F K + L+ LC + A L+ K++ P +T +
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL---KEMEVSGCPQSTVT 478
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N I++G C EAE V+ +M GI + ++F+ +I A + L DQM
Sbjct: 479 YNTIIDGLCKR-RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G++ + YN+++ K + A ++++M G +VVTY +LI LCKAR+
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
A + M +G+ PT + Y+ + + G + L M ++G P TY ++
Sbjct: 598 QAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIV 657
Query: 352 IKKFSR-WRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ R F E+++NG P+ SS+ L L
Sbjct: 658 FRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLL 698
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 158/389 (40%), Gaps = 16/389 (4%)
Query: 44 DWEAAFTFFLWA-GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPSL 100
D EAA A + G S Y +I LG FD L+ EMR G E G L
Sbjct: 68 DPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGL 127
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFY-AYKRFKFAVGIEDFQGLLSALCRYKNVQ--DA 157
V I Y + A + F E + LL+ L ++ ++
Sbjct: 128 VQS-----FIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLES 182
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ ++ + P + +FN +++ C +R A + EMS + D +F+ ++
Sbjct: 183 AYTEMSSQGIEP-DVVTFNTVIDALCR-ARQARTAVLMLEEMSSCDVAPDETTFTTLMEG 240
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ + ++ LRL +M MG N +I+ K V DA+ ++ G P+
Sbjct: 241 FVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPD 300
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLE 334
VT+++ + LC+ +D A + MLQ G P + TY ++ + EE G++
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVN 360
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M GC P T+ LI Q + E++ G P+ ++ LI+AL G
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVG 420
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
A + + EMK P+ T +L D
Sbjct: 421 DPHLAVRLFEEMKSSGCTPDEVTYNILID 449
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +FN+I+NG C G +E V +EMS++G D V+++ +++ Y K N H+ L L
Sbjct: 52 NLITFNMIINGLCRD-GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M R G+ + Y ++I+++ K + A+ M +G+ PN TY ++I +
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDT 347
LDEA + +EM + G P+I TY+A ++ ++ EE GLL+ M G P +
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +I F+R ++ F++ E+ PD +Y++LI L +L EA + EM
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290
Query: 408 EKQLLPE 414
+L P+
Sbjct: 291 TIKLPPD 297
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 162/336 (48%), Gaps = 9/336 (2%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD- 156
P++VT T+ I YC + A + + F +++ LCR +++
Sbjct: 16 PNVVTYNTM---IDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
+E L+ ++ + + ++N ++NG+C G+ +A + EM + G+ +VV+++ +I+
Sbjct: 73 SEVLVEMSRKGYVPDEVTYNTLVNGYCKE-GNFHQALVLHAEMVRNGLSPNVVTYTSLIN 131
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
KA NL++ + FDQM G+ + + Y +I+ A+ L+ +A ++ M G P
Sbjct: 132 SMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIP 191
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLL 333
++VTYN+LI C +++EA +M+ +G+ P + +Y + +E+ F +
Sbjct: 192 SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMK 251
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M P TY LI+ R+ ++ E+ PD +YT LI+A
Sbjct: 252 VEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
G L +A + EM +K LP+ T +L + NKQ
Sbjct: 312 GDLNKALHLHDEMIQKGFLPDAVTYNVLIN-GLNKQ 346
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 5/266 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N +++G+C + + EA M +G+ ++++F+ II+ + L + +
Sbjct: 17 NVVTYNTMIDGYCKL-KRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M R G D YN +++ K A+ L M G++PNVVTY SLI +CK
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A L+ A + FD+M RG+ P RTY ++ + G +E + +L M + G P+ T
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI + + ++ G PD SY+ +I N +L+ A Q +EM
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 408 EKQLLPEPKT-DELLQDWSYNKQFVE 432
K +LP+ T L+Q ++ E
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTE 281
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R + EM + G +VV+++ +I Y K + + M G+E + +N +I+ L
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ +K+ ++ M KG P+ VTYN+L+ CK +A EM++ G+SP +
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 314 RTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY + ++ + + G + M G P TY +I F++ ++V NE
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ +G P +Y ALI+ + G++EEA +M K +LP+
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 161/387 (41%), Gaps = 39/387 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY Y+T++ K F A L EM P++VT +L I C
Sbjct: 81 RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSL---INSMCKAG 137
Query: 118 DVGRAINAF-------YAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLMFCNKDVF 168
++ RA+ F + I F QGLL R N + F
Sbjct: 138 NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM--------TRSGF 189
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ ++N ++NG C ++G EA + +M +G+ DVVS+S IIS +++ + L +
Sbjct: 190 IPSIVTYNALINGHC-VLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++ +M + D Y+++I L + R + +A + + M + P+ TY +LI
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTN 345
CK L++A DEM+Q+G P TY+ ++ + +E LL + P+
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368
Query: 346 DTY---------------IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY + L+K F +V+ + + P+ + Y +IH
Sbjct: 369 VTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGH 428
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G + +A++ Y EM +P T
Sbjct: 429 CRIGNVLKAYKLYKEMVHVDFVPHTVT 455
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
LR F +M+R G + YN +I K + +A ++SM KG+ PN++T+N +I
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPT 344
LC+ +L E + EM ++G P TY+ ++ + G + L M + G P
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI + + ++++ G P+ +YT +I+ G L+EA++
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 405 EMKEKQLLP 413
EM +P
Sbjct: 183 EMTRSGFIP 191
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 25/308 (8%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G Y T+I+ + ++ D A+ + EM G P VT +L I+ C +
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSL---IQGLCEQRRL 279
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F K + L++A C+ ++ A HL K P + ++N+
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP-DAVTYNV 338
Query: 178 ILNGWCNIIGSSREAERVWMEM-----SQRGICYDVVSFSCIISCYSKARNLHKVL---- 228
++NG N S+EA R+ +++ + Y+ + +C + A L K
Sbjct: 339 LINGL-NKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKG 397
Query: 229 ------RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
++F+ M + + +YN +IH + V A L K M P+ VT
Sbjct: 398 LMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVL 457
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKM 339
+L+K L E + ++L+ ++I + + VF LL M K
Sbjct: 458 ALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKD 517
Query: 340 GCQPTNDT 347
G P+ T
Sbjct: 518 GLIPSTGT 525
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + GC P TY +I + + ++ F + G P+ ++ +I+ L +G+
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKK 455
L+E + +EM K +P+ T L + Y K+ Q L A ++G + V++
Sbjct: 69 LKETSEVLVEMSRKGYVPDEVTYNTLVN-GYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127
Query: 456 S 456
S
Sbjct: 128 S 128
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 199/455 (43%), Gaps = 59/455 (12%)
Query: 9 REFSHKRSEMRNKIEE----CGIKVSSEL-----VSEVLSWV--RNDWEAAFTFFLWAGK 57
R FS KRS M N EE C + S L S+VLS + +++ + F +
Sbjct: 39 RTFSTKRSSM-NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-E 96
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
G H Y+ +I L + +F A +++ +M P +VT +L I +C +
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL---INGFCQGN 153
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
V AI+ + F + + ++ C+ V DA L +D + ++N
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C G +A R+ +M R I +V++F+ +I + K + ++L+++M R
Sbjct: 214 SLVAGLC-CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D YN++I+ L V +A ++ M KG P+VVTYN+LI CK++++DE
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 297 ARQAFDEMLQRGI--------------------------------SPTIRTYHAFLDIIR 324
+ F EM QRG+ P IRTY L +
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 325 TG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN---EISENGNGP 378
E+ L E+M+K + TY ++I + GNV W+ +S G P
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK---IGNVEDAWDLFRSLSCKGLKP 449
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
D SYT +I + +++ Y +M+E LLP
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 44/286 (15%)
Query: 138 IEDFQGLLSALCRYKN----VQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR--E 191
I DF +LS + + KN + H+ C + S+NI++N C SR
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCG---IGHDLYSYNIVINCLCR---CSRFVI 122
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A V +M + G DVV+ S +I+ + + + + L +M+ MG D +YN +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
K LV DA+ L ME GV + VTYNSL+ LC + + +A + +M+ R I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 312 TIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ T+ A +D+ F + +F K++ E+
Sbjct: 243 NVITFTAVIDV--------------------------------FVKEGKFSEAMKLYEEM 270
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ PD +Y +LI+ L ++G+++EA Q M K LP+ T
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
LI+ C ++ A FY K IE LLS + N +A +++ ++F
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKL-NRTEAAWVLYA--EMF 213
Query: 169 PFNTKS----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
KS FNI++N C G ++A+ M G+ ++V+++ I+ Y + +
Sbjct: 214 RLRIKSSVYTFNIMINVLCK-EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ MKR IE D Y ++I + K +++A + + M +KG+ P+ V YN+L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
I C LD A DEML++GISPT+ TY++ + + + +E +++ +++ G
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI + R F + +E+ +G P + +YT+L+H L +++EA
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 402 YYMEMKEKQLLPE 414
+ ++ + +LP+
Sbjct: 453 LFKKITSEGVLPD 465
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 43/393 (10%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ MI +L K K A + M P++VT T+ + YC+ V A
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI---VHGYCSSGRVEAAD 276
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
KR K + L+S +C+ +++A + K + P + +N +++G
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP-SAVIYNTLIDG 335
Query: 182 WCN----------------------------IIGS------SREAERVWMEMSQRGICYD 207
+CN +I + + EAE + E+ ++GI D
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ +I+ Y + N K L D+M GI+ +K Y +++H L+K +K+A L K
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ +GV P+V+ +N+LI C + A + +M + + P T++ + R G
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE L + M++ G +P + ++ LI +SR + F+V NE+ + G P +Y
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL+ L N + + A + EM K + P+ T
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 170/377 (45%), Gaps = 11/377 (2%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
N + AF F + K+ G + ++++++ K+ + + AW L EM S+ T
Sbjct: 165 NRADEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
I+I C + +A + + I + ++ C V+ A+ ++
Sbjct: 224 FN---IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 163 CNK--DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
K + P ++ ++ +++G C G EA +++ EM Q+G+ V ++ +I +
Sbjct: 281 TMKRQKIEP-DSFTYGSLISGMCKQ-GRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
NL D+M + GI YN++IHAL + +A ++K ++EKG++P+ +T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
YN LI C+ +A DEML GI PT +TY + L ++ +E L + +
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G P + LI F++ ++ PD ++ ++ GK+E
Sbjct: 459 SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518
Query: 398 EAHQYYMEMKEKQLLPE 414
EA + + EMK + + P+
Sbjct: 519 EARELFDEMKRRGIKPD 535
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 15/272 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + + Y+++I L ++ D A +I E++ P +T ILI YC
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN---ILINGYCRC- 409
Query: 118 DVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
A AF + A GI+ + LL L + +++A+ L ++ V P +
Sbjct: 410 --ANAKKAFLLHDEM-LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP-D 465
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
FN +++G C+ + + A + +M + + D V+F+ I+ + + + + LF
Sbjct: 466 VIMFNALIDGHCSN-SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+MKR GI+ D +N +I ++ +KDA + M + G P V+TYN+L++ LCK
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
++ D A + EM+ +G++P TY ++ I
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F+ ++ C++ + EA + M ++G+ + + + ++S + K L+ +M
Sbjct: 154 FDYLIKSCCDM-NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R+ I+ +N +I+ L K +K A + ME GV PN+VTYN+++ C + ++
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+ A M ++ I P TY + + + + G EE + E M + G +P+ Y L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I F +E+ + G P S+Y +LIHALF+ + +EA E++EK +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 412 LPEPKTDELL 421
P+ T +L
Sbjct: 393 SPDAITYNIL 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+ +I + A+ L DEM P TK+T L+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP---TKKTYTSLLHVLSKK 444
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNT 172
+ + A + F + F L+ C NV+ A L+ KD+ P +
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELL---KDMDRMKVPPDE 501
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+FN I+ G C G EA ++ EM +RGI D +SF+ +IS YS+ ++ R+ +
Sbjct: 502 VTFNTIMQGHCRE-GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G YNA++ L K + A L+K M KG+ P+ TY +LI+ + K
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Query: 293 KLDEARQA 300
DE +
Sbjct: 621 IPDENKNT 628
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++ +I + +A +M+EKGV P + T NSL+ K + + A + EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 305 LQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ I ++ T++ ++++ + ++ G +E+ G +P TY ++ +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS---GVKPNIVTYNTIVHGYCSS 269
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + PD +Y +LI + G+LEEA + + EM +K L P
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 419 ELLQDWSYNK 428
L D NK
Sbjct: 330 NTLIDGFCNK 339
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 187/423 (44%), Gaps = 52/423 (12%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+ R+F +R+ + + V+SELV VL + FF W+ ++ Y ++
Sbjct: 51 VRRDFYPERT-----LNKLNAPVTSELVFRVLRACSRSPTESLRFFNWS--RAYYTPTSI 103
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL-VTKQTLLILIRRYCAVHDVGRAINA 125
EY +I IL K +++ + W LI +M+ + P ++ +T+ +I Y + +A+
Sbjct: 104 EYEELIKILAKSKRYSSMWKLITQMK--DQNPQFSISSETVRSIIEEYGRSGLIDQAVEV 161
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
F ++ + LL ALC K A L+ K + P N ++++++NGWC
Sbjct: 162 FNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAP-NKTTYSVLVNGWC 220
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G +EA+ EMS++G V + R+L
Sbjct: 221 S-NGKFKEAQLFLEEMSKKGFNPPV-----------RGRDL------------------- 249
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+I L + A ++ M ++G P+V T+N LI+ +C + ++D +
Sbjct: 250 -----LIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYS 304
Query: 304 MLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ + G P I +Y + + + G +E F LL + + G +P Y +IK R Q
Sbjct: 305 LRKLGFCPDINSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQ 364
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
F + F + E+ G+ P+R YT LI GK EA Y +EM E L P + ++
Sbjct: 365 FDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDM 424
Query: 421 LQD 423
+ D
Sbjct: 425 VTD 427
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 275 APNVVTYNSLIKPLCKARKLDEA----RQAFDEMLQRGISP-TIRTY---HAFLDIIRTG 326
P + Y LIK L K+++ Q D+ Q IS T+R+ + +I
Sbjct: 99 TPTSIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQA 158
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EVF S+ C+ D Y L+ + F + + + G P++++Y+ L
Sbjct: 159 VEVFNQCNSL---NCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTTYSVL 215
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
++ NGK +EA + EM +K P + +LL + N + E
Sbjct: 216 VNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFE 261
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 16/383 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A Y ++ L K KFD A ++ EM P VT TL+ + ++ G
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF------GS 176
Query: 122 AINAFYAYKR-FKFAVGIED--FQGLLSALC-RYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
AF + + +G D F+ ++ LC +Y +V+ A ++ F FN
Sbjct: 177 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++NG+C A ++ M ++G +V +F+ +I+ KA + + +L ++M
Sbjct: 237 LVINGFCKA-KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + Y+ VI+ L K V DA L + ME + PNVVT+N LI LCKA++++E
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTND-TYIMLI 352
ARQ + M + G +P I TY++ +D + +E F L +++ + G N TY L
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
++ + + ++++ + + G PD ++YT+LI + E + EM K
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475
Query: 413 PEPKTDELLQDWSYNKQFVERQI 435
P T + + ER I
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAI 498
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 159/408 (38%), Gaps = 47/408 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + ++ +I K + D+A+ L++ M P++ T ILI C + V
Sbjct: 227 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFT---FTILITGLCKANRV 283
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNII 178
G A + + + +++ LC+ V DA E + P N + NI+
Sbjct: 284 GEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 343
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++G C EA +++ M + G D+++++ +I K+ + + +LF + G
Sbjct: 344 IDGLCKA-KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 402
Query: 239 IECDRKV-YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ V Y+ + H A + DA + + +KG +P++ TY SLI CK + E
Sbjct: 403 VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEV 462
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +EM +G P + T A L + G E L +SM GC Y ++++
Sbjct: 463 VELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 522
Query: 355 FSRWRQFGNVFKVWNEI--------------------------------------SENGN 376
+R + V ++ SE G
Sbjct: 523 MARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGF 582
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
SSY L+ L + +EA Q + M PE T ++ W
Sbjct: 583 AAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 630
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 164/407 (40%), Gaps = 47/407 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G + + Y T+I L K + D A+ L M P++VT ILI C
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHN---ILIDGLCKAKR 352
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
+ A ++ + A I + L+ LC+ V +A L V N +++
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ +G+ +G +A R++ + +G D+ +++ +I Y K +V+ L ++M
Sbjct: 413 TLFHGY-AALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 471
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN-------------- 282
G +AV+ L +G + AI L SM +G + + YN
Sbjct: 472 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDK 531
Query: 283 ------------------------SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+L++ LC+ K D+A+Q +M +RG + + +Y+
Sbjct: 532 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNR 591
Query: 319 FLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L ++ +E + E+M G P T ++I + + +++ +S+ G
Sbjct: 592 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 651
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
PD + LI +G+ + A + EM E L P T +LL+
Sbjct: 652 CCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLE 698
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 22/343 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G A Y+++I L K + D A+ L + E+G S T L Y A+
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP--ESGVSAANAVTYSTLFHGYAAL 421
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-KNVQDAEHLMFCNKDVFPFNTKSF 175
+ A F F+ + + L+ C+ + V+ E + FP +
Sbjct: 422 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481
Query: 176 NIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +L G G+ E A +++ M+ RG D + ++ ++ ++A K L + +Q+
Sbjct: 482 SAVLGGL--FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQV 539
Query: 235 --KRMGIECDRK------VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
KR DRK +A++ +L + DA L+ M E+G A V +YN L+
Sbjct: 540 IDKR-----DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLS 594
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQP 343
L + ++ DEA Q F+ M+ G +P I T + + + + +V + L++ M K+GC P
Sbjct: 595 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+T LI + + + K+ E++E G P+ +++ L
Sbjct: 655 DIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 148/342 (43%), Gaps = 50/342 (14%)
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFNIILNGW 182
F+ + R + + L LCR Q+A L F N + P N ++ I++ G+
Sbjct: 10 FFDWARSRVGHNVFSCNCALDMLCRLNRRQEALAL-FRNAMARICMP-NKFTYGILIRGF 67
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC- 241
+ G A ++ EM G + V + ++ A +V+ + + M +C
Sbjct: 68 SSA-GDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDA---GRVVEALEHFRAMAKDCA 123
Query: 242 -DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK---------- 290
D Y A++HAL K +A +++ M +G AP+ VT+++LI LCK
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 291 -----ARKLDEARQAFDEMLQR---------------------GISPTIRTYHAFLDIIR 324
R + + AF+ ++QR G +PT+ ++ ++
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 325 TGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+++ + LLE M + GC P T+ +LI + + G ++ ++ G P+
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y+ +I+ L G++++A++ + M+ + P T +L D
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 345
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 145/285 (50%), Gaps = 5/285 (1%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ LC + DA L N+ P + ++N+I++ C G EA + +M
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKR-GMLEEACDLIKKM 106
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G DVV+++ ++ K+ + + L LF++M+R+G +R+ +N +I L + +
Sbjct: 107 IEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 166
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A + ME + + P+ +Y LI L KA KL+EA + F ML GI+P+ TY+
Sbjct: 167 DQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226
Query: 320 LD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + T +E L +SMR GC+P+ T+ +LI + + F++ ++++G+
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGH 286
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
PD +Y+ LI L ++++A +M ++Q P T L
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 160/379 (42%), Gaps = 20/379 (5%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND F L SG ST Y ++I L FD A L +M PS VT
Sbjct: 27 NDARDLFQKLL----HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 82
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
++I C + A + + + ++ LC+ V++A L+
Sbjct: 83 YN---VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA--LLL 137
Query: 163 CNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
N+ P N +S N I+ G C +A +V+ EM R I D S+ +I
Sbjct: 138 FNEMERLGCTP-NRRSHNTIILGLCQQ-SKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+KA L++ +LF +M GI YN VIH + + +A+ L KSM KG P+
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----IIRTGEEVFGLLE 334
T+N LI CK K+DEA + M G P + TY + I R ++ LLE
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV-DDARHLLE 314
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K C+PT T LI + + +V + + +G PD +Y L+H G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 395 KLEEAHQYYMEMKEKQLLP 413
+ E A + +M + L P
Sbjct: 375 QTERARELLSDMVARGLAP 393
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 10/359 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S Y+ +I K + A LI +M P +VT T++ C V
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM---DGLCKSGRV 131
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ F +R ++ LC+ + A + +D+ P ++ S+ I
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP-DSWSYGI 190
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G G EA +++ M GI V+++ +I A L + L LF M+
Sbjct: 191 LIDGLAKA-GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G R +N +I A K + +A L+K M + G P+VVTY++LI LC ++D+A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R ++M++R PT+ T + + + + G +E +L++M G P TY L+
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R Q ++ +++ G P+ +YTAL+ L +L EA + +MK P
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M++R + D S+ +I +KA L+ LF ++ G+ Y ++IH L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA L M +G P+ VTYN +I CK L+EA +M++ G P + TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + ++G EE L M ++GC P ++ +I + + +V++E+
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD SY LI L GKL EA++ + M + + P T
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 15/314 (4%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
++V P ++ S+ I+++G G +A ++ ++ G+ V+++ +I A +
Sbjct: 4 RNVSP-DSWSYGILIDGLAKA-GKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LF M R G YN +I A K ++++A L+K M E G P+VVTYN++
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGC 341
+ LCK+ +++EA F+EM + G +P R+++ L + + ++ + M
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P + +Y +LI ++ + +K++ + ++G P +Y +IH + L L+EA +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK-----AHQPQSGQNTRVIS--- 453
+ M+ K P T +L D + ++ LK H P + +IS
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301
Query: 454 --KKSDQDREFLQQ 465
+ D R L+
Sbjct: 302 SIARVDDARHLLED 315
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 153/362 (42%), Gaps = 24/362 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K K + A+ L M PS VT ++I C + + A+ F
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN---VVIHGMCLAYTLDEALELFK 244
Query: 128 AYK-------RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIIL 179
+ + RF F + L+ A C+ + +A L+ D + +++ ++
Sbjct: 245 SMRSKGCRPSRFTFNI-------LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C+I +A + +M +R VV+ + +I KA + + + D M G
Sbjct: 298 SGLCSI-ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D YN ++H + + A L+ M +G+APNVVTY +L+ LCKA +L EA
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGC---QPTNDTYIMLIKKFS 356
F +M G +P + TY A + + +V G L+ +M C P + Y L +
Sbjct: 417 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476
Query: 357 RWRQFGNVFKVWNEISEN--GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + ++ E E+ Y + L GK+E A + +M LP
Sbjct: 477 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPA 536
Query: 415 PK 416
P+
Sbjct: 537 PE 538
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 110/289 (38%), Gaps = 59/289 (20%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G S ++ +I K K D A+ L+ M P +VT T
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST----------- 295
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--- 173
L+S LC V DA HL+ +D+ K
Sbjct: 296 ---------------------------LISGLCSIARVDDARHLL---EDMVKRQCKPTV 325
Query: 174 -SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+ N +++G C G +EA V M G DVV+++ ++ + +A + L
Sbjct: 326 VTQNTLIHGLCK-AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G+ + Y A++ L K + +A + M+ G APN+ TY +LI C A
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAF-------------LDIIRTGEE 328
++D + F EM+ GISP Y L+I+R G E
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 48/288 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I+ L + + D A L+++M + P++VT+ TL I C +
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL---IHGLCKAGRI 341
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A A + + + L+ CR + A L+ + + P N ++
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP-NVVTYTA 400
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G C ++R EA V+ +M G ++ +++ +I + A + L+LF +M
Sbjct: 401 LVSGLCK---ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Query: 236 RMGIECDRKVYNAVIHALAK-GRLVKD--------------------------------- 261
GI D VY + L K GR +
Sbjct: 458 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGK 517
Query: 262 ---AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
A+ ++ M G P SL+ LCK+ + EAR +E++
Sbjct: 518 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 49/104 (47%)
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + P + +Y +LI ++ + + ++ ++ +G P +YT+LIH L +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
++A + + +M + P P T ++ D S + +E +K
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIK 104
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 17/364 (4%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+++ ++A L K+ + TA +L ++ PS+VT L IL+ YC + +
Sbjct: 12 QFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVT---LTILMNCYCHTGGITFLFSIL 68
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + F L+ +C N Q E L+F + V F + S+ I++NG C
Sbjct: 69 TKILKMGYEPNSITFTTLIKGMCL--NGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126
Query: 184 NIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
+ G +R A M+M ++ + DVV +S II K + + RL+ +M GI +
Sbjct: 127 KM-GETRAA----MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPN 181
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
++ ++ AL K R K A++L+ M +KGV PNVVTY +++ C ++++A F+
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241
Query: 303 EMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+Q G+ P + Y+ ++ + + +E L + M P TY +LI +
Sbjct: 242 VMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++ +E+ G D +Y +L+HAL N L++A E+K++ + P T
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361
Query: 420 LLQD 423
L D
Sbjct: 362 TLID 365
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ +LC+ K V DA L K +FP N +F+I+++ C ++A +
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP-NVYTFSILVDALCKD-RKGKQAMNLLAM 207
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++G+ +VV++ I+ Y ++K L +F+ M + G+E + YN +I+ L K +
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A++L K M K + P+VVTYN LI LCK K+ + + DEM G + I TY++
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + ++ L++ ++ G QP TY LI + + + + ++ EI G
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y +I+ L G +EA M++ +P+
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 10/295 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K + A+ L EM P++ T IL+ C +A+N
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNV---YTFSILVDALCKDRKGKQAMNLLA 206
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ + + ++ C V A ++ + + V P N +NII+NG C
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP-NVWCYNIIINGLCKK 265
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA ++ EM + I DVV+++ +I K + L L D+M+ +G D
Sbjct: 266 -KRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIIT 324
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN+++HAL K + AI+L+K ++++G+ PNV TY +LI LCK +L++A F E+L
Sbjct: 325 YNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEIL 384
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
G T+ TY+ ++ + + G +E LL M C P +Y +I S
Sbjct: 385 TEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + ++ L K RK A L+ M P++VT ++ YC V+ V
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM---DGYCLVNQV 233
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTK 173
+A+N F + + + +++ LC+ K V +A +L N DV
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV----- 288
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI+++G C + S E V EM G D+++++ ++ K +L + + L +
Sbjct: 289 TYNILIDGLCKLGKISTSLELVD-EMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKE 347
Query: 234 MKRMGIE---CDRKV--------------------------------YNAVIHALAKGRL 258
+K GI+ C YN +I+ L K L
Sbjct: 348 IKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+A++L+ ME+ P+ V+Y ++I L + + + + M+ RG+S ++
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLK 463
>gi|225470179|ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 170/403 (42%), Gaps = 56/403 (13%)
Query: 22 IEECGIKVSSELVSEVLSWVRND---------WEAAFTFFLWAGKQSGYAHSTREYHTMI 72
++E I+VS LV EVL + + + FF+W+G+Q Y H+ YH ++
Sbjct: 137 LDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQQENYRHTVNAYHLIM 196
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAFYAY 129
I + +F W L+DEM E G VT +T ILI C + G RA+ F
Sbjct: 197 KIFAESDEFKAMWRLVDEMI--EQGFP-VTARTFQILI---CTCGEAGLARRAVERFVKS 250
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F + + +L H + C K + ++
Sbjct: 251 KNFNYRPFKHSYNAIL-------------HCLLC--------LKQYKLV----------- 278
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
E V+ +M D+++++ ++ + L + RL +++ G D +N +
Sbjct: 279 ---EWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNIL 335
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+H L KG A+ L+ M+E G P+V+ + +LI L +A LD + FDEM++ G
Sbjct: 336 LHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGC 395
Query: 310 SPTIRTYHAFL-DIIRTGEEVF--GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + Y + I GE GL E M G P TY +I+ +F
Sbjct: 396 MPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARS 455
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ E+ G P+ Y L+ L GKL+EAH+ M +K
Sbjct: 456 MLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDK 498
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 7/297 (2%)
Query: 185 IIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
I S E + +W EM ++G +F +I +A + + F + K
Sbjct: 198 IFAESDEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRP 257
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YNA++H L + K + + M + +P+++TYN ++ + KLD+ +
Sbjct: 258 FKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLL 317
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+E+ G SP T++ L ++ G + LL M+++G P+ + LI SR
Sbjct: 318 EELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRA 377
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT- 417
++E+ + G PD YT +I + G+LE A + EM K LP T
Sbjct: 378 GNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTY 437
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRH 474
+ +++ ++F E + + N V + R + E V+RH
Sbjct: 438 NSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRH 494
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 175/389 (44%), Gaps = 8/389 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI L K KFD ++ + M+ E G L T TL I C ++ A +
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSGNLDGATRVYK 289
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + + +L+ R +++ L + S+NI++ G
Sbjct: 290 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFEN-A 348
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA +W + ++ C D +++ ++ K L+K L + ++ + + D Y+
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I+ L + + + ++ M + G PN N++I +A KL++A + F M+ +
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468
Query: 308 GISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G PT+ TY+ ++ + E E + L++ M + G +P TY +L+ + ++
Sbjct: 469 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMA 528
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+W + E G PD + +IH L +GK+E+A Q Y EMK++ +P T L +
Sbjct: 529 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEG 588
Query: 425 SYNKQFVERQIASLKAHQPQSGQNTRVIS 453
Y + ER + + H Q G +IS
Sbjct: 589 FYKVRDFERA-SKIWDHILQYGLQPDIIS 616
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 133/267 (49%), Gaps = 5/267 (1%)
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+T +++ ++NG C G E V +M++ G + + +I+ + +A L LR
Sbjct: 402 LDTFAYSSMINGLCRE-GRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F M G YN +I+ L+K +A +L+K M +KG PN++TY+ L+ LC
Sbjct: 461 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC 520
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTND 346
+ +KLD A + + L++G P ++ ++ + + +G E+ L M++ C P
Sbjct: 521 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLV 580
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
T+ L++ F + R F K+W+ I + G PD SY + L ++ +A + +
Sbjct: 581 THNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDA 640
Query: 407 KEKQLLPEPKT-DELLQDWSYNKQFVE 432
++ +LP T + L+Q + K ++E
Sbjct: 641 VDRGVLPTAITWNILVQGYLALKGYME 667
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
S++ +++ ++ + F + MG+ + + YN +I + + A L+ M
Sbjct: 91 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 150
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
+G +P+V +Y +LI L K + +A + FDEM +RG++P + Y+ +D ++
Sbjct: 151 WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 210
Query: 330 FGLLESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E ++ P +Y ++I + +F F++W+ + +N G D +Y+
Sbjct: 211 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYST 270
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
LIH L +G L+ A + Y EM E + P+
Sbjct: 271 LIHGLCGSGNLDGATRVYKEMAENGVSPD 299
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+++ R ++DA +K FP ++N ++NG S EA + EM
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFS-EAYALVKEM 500
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q+G +++++S +++ + + L L L+ Q G + D K++N +IH L V
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+DA+ L M+++ PN+VT+N+L++ K R + A + +D +LQ G+ P I +Y+
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620
Query: 320 LDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKF 355
L + + + G L G PT T+ +L++ +
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVI----------HALAKGRLVKDA 262
+I +N H L +FD + R G V++ ++ HA AK + A
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQA 72
Query: 263 ISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ + + M E G P + +YNSL+ L ++ K DEA F G+SP ++T
Sbjct: 73 LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQT------ 126
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
Y +LIK R +QF ++ N + G PD
Sbjct: 127 --------------------------YNILIKISCRKKQFDKAKELLNWMWGQGFSPDVF 160
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
SY LI++L NG + +A + + EM E+ + P+ +L D + K
Sbjct: 161 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 207
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 184/411 (44%), Gaps = 15/411 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S +T++ L K + A L +M PSL+T TL+ ++ + V +
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
++ + Y + + + L+ CR +N+ A + + P N+ +++
Sbjct: 218 ELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP-NSVTYST 273
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG CN G EA + EM ++GI V +++ I+ + + + L +MK+
Sbjct: 274 LINGLCNE-GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + Y A+I L++ ++ AI L M ++G+ PN VTYN+LI LC + A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ F M G +TY+ + + G E+ L E M KMG PT TY LI
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ N ++ + + ENG PD +Y L+ GKLE A Y+ EM E L P
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 415 PKTDELLQDWSYNKQFVERQIASLKAHQ-----PQSGQNTRVISKKSDQDR 460
P + L D V+ ++ LK + P VI+ S ++R
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 26/385 (6%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+E+++ V D E+ FF W K+ Y H+ + +M+ L + R F A D +R
Sbjct: 78 VAEIVA-VHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA----DHIR- 131
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+++I+ ++ R + F + LL L +++
Sbjct: 132 -------------ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178
Query: 154 VQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
V+ A +L N + P + +FN ++N + G REAE + ++ Q + DV ++
Sbjct: 179 VEGARNLYKQMLNSGIQP-SLLTFNTLIN-ILSKKGKVREAELILSQIFQYDLSPDVFTY 236
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I + + RNL +FD+M + G + + Y+ +I+ L V +A+ +++ M E
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
KG+ P V TY I LC +EA + M +RG P ++TY A + + R G E
Sbjct: 297 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 356
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
GL M K G P TY LI + +F K+++ + +G+ + +Y +I
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
L L G +E+A + +M + LP
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLP 441
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 161/362 (44%), Gaps = 12/362 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + + Y +I+ L ++ K + A L +M P+ VT L I C
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL---INELCVG 386
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SF 175
A+ F+ + + + ++ LC +++ A L + P T ++
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++NG+ G+ A R+ M + G D +++ ++S +SK L F +M
Sbjct: 447 NTLINGYLTK-GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ + Y A+I +K V A+SL+K MEE G PNV +YN++I L K +
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLI 352
EA + D+M+++G+ P + TY +D + R G F + M K C P TY LI
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + +SE G P +Y+ L+ L G+ EA Q +MKE+
Sbjct: 626 YGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 681
Query: 413 PE 414
P+
Sbjct: 682 PD 683
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 32/366 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y+ +I L +F TA + M G SL QT +I+ C
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH---GSLANTQTYNEIIKGLCLGG 422
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
D+ +A+ F + + + L++ NV +A L+ C D + +N
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+++G+ G A + EM + G+ + VS++ +I +SK + L L
Sbjct: 483 E-----LVSGFSKW-GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M+ MG + + YNAVI+ L+K +A + M E+G+ PNV+TY +LI LC+
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL--------ESMRKMGCQP 343
+ A + F +M +R P + TY + ++GL E M ++GC+P
Sbjct: 597 GRTQFAFKIFHDMEKRKCLPNLYTYSSL---------IYGLCQEGKADEAERMSEIGCEP 647
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
T DTY L+ R +F ++ ++ E G PDR Y +L+ A N +++ A + +
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707
Query: 404 MEMKEK 409
++ K
Sbjct: 708 HSIEAK 713
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 12/296 (4%)
Query: 24 ECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
ECG+ + + ++ D + L ++ G + Y+ +I L K +F
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + D+M P+++T TL I C A F+ ++ K + +
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTL---IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 622
Query: 143 GLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ LC+ +AE + + C + ++T +++G C G EAE++ +M
Sbjct: 623 SLIYGLCQEGKADEAERMSEIGCEPTLDTYST-----LVSGLCRK-GRFYEAEQLVKDMK 676
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+RG C D + ++ + K + L++F ++ G + +Y A+I AL K V+
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+A +L +M EK + + + L+ L K +LD + M + +P I+TY
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 144/346 (41%), Gaps = 18/346 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G Y+ +++ K K ++A EM P+ V+ L I +
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL---IDGHSKD 526
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNT 172
V A++ + +E + +++ L + +AE + C+K V P N
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI--CDKMVEQGLLP-NV 583
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ +++G C G ++ A +++ +M +R ++ ++S +I + + +
Sbjct: 584 ITYTTLIDGLCRN-GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----E 638
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M +G E Y+ ++ L + +A L+K M+E+G P+ Y SL+ CK
Sbjct: 639 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 698
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
++D A + F + +G + Y A + + + G EE L ++M + +
Sbjct: 699 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 758
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
+L+ + + K+ + + P+ +Y L L GK
Sbjct: 759 VLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 144 LLSALCRYKNVQ---DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL LC K Q D H+M +K P + ++ ++NG G +A ++ M
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE-GQLDKAYSLFDAML 235
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RG DVV++S IIS SK + + K ++F +M + G+ D +Y +++H K
Sbjct: 236 DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPK 295
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+AI + K M GV P+VVTY +L+ LCK K EAR+ FD +++RG P TY L
Sbjct: 296 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 355
Query: 321 DIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
T E+ LL+ M K G Q + + M++ +++ + V++ + + G
Sbjct: 356 HGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLN 415
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +Y ++ L G++++A + +K + L P
Sbjct: 416 PDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 452
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y ++I+ L K + D A + M P + +L + YC+
Sbjct: 238 GPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL---VHGYCSSGKP 294
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI F R + + L+ LC+ +A + + P +T ++
Sbjct: 295 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST-TYGT 353
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G+ G+ E + M ++G+ F+ I+ Y+K + + L +F M++
Sbjct: 354 LLHGYATE-GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 412
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y V+ L V DA+S S++ +G+APN+V + +LI LC K D+
Sbjct: 413 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKV 472
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ EM+ RGI ++A + ++ + G E L + M ++G +P +TY LI
Sbjct: 473 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 532
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + K+ + NG P +Y +I+ NG++E+ EM K + P
Sbjct: 533 YCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPG 592
Query: 415 PKTDELL 421
T E+L
Sbjct: 593 IVTYEML 599
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ K K D A + MR P +V T+L ++ C V A++ F
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL---CTAGRVDDALSQFN 442
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ K A I F L+ LC C+K W
Sbjct: 443 SLKSEGLAPNIVVFTTLIHGLCT------------CDK----------------W----- 469
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ E + EM RGIC D + F+ I+ K + + LFD M R+GIE + YN
Sbjct: 470 --DKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 527
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + +A+ L+ M GV P+ VTYN++I + ++++ EM +
Sbjct: 528 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 587
Query: 308 GISPTIRTYHAFL 320
G++P I TY L
Sbjct: 588 GVNPGIVTYEMLL 600
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 42/234 (17%)
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAP- 276
+A + VLR +M +G + D Y ++ L + + A+ L+ M + KG P
Sbjct: 150 GRAMRMDIVLR---RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 206
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESM 336
+VV Y ++I L + +LD+A FD ML RG SP D++
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSP---------DVV------------- 244
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
TY +I S+ + +V+ + +NG PD YT+L+H +GK
Sbjct: 245 ----------TYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 294
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDW--SYNKQFVERQI-ASL--KAHQPQS 445
+EA + +M + P+ T L D+ K R+I SL + H+P S
Sbjct: 295 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 348
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 262 AISLMKSMEEKGV---APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI--SPTIRTY 316
AISL M G APN+ TY +I + +LD A ++ G+ P
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139
Query: 317 HAFLDIIRTGEEVFGL---LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ + G + L M ++GC+P +Y +L+K + + + +++
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD 199
Query: 374 N-GNGP-DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ G P D +YT +I+ L G+L++A+ + M ++ P+ T
Sbjct: 200 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVT 245
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 168/354 (47%), Gaps = 14/354 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++I LGK + D A++L ++M P + +L IR + GR +
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL---IRSF---FKCGRKEDGHK 530
Query: 128 AYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
YK D + + + C +K + + +F N F + +S++I+++G
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G + E ++ M ++G D +++ +I + K+ ++K +L ++MK G
Sbjct: 591 KA-GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y +VI LAK + +A L + + G+ NVV Y+SLI K ++DEA +E
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++Q+G++P + T++ LD + EE+ L +SM+ + C P TY +LI R R+
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F F W E+ + G P+ +YT +I L G + EA + K +P+
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPD 823
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 193/471 (40%), Gaps = 80/471 (16%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
+ N + G K ELV VL ++ D A +F WA KQ+ H Y++++ ++ +
Sbjct: 79 LENSLSALGEKPLPELVIGVLKRLK-DANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMAR 137
Query: 78 VRKFDTAWALIDEMRGGETGPS------LVTK--------------QTL----------- 106
+FD +++EM GPS LV QT+
Sbjct: 138 NTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSA 197
Query: 107 -LILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
ILI V + + F+ + + V + F L+ R V A L+
Sbjct: 198 YTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLL---- 253
Query: 166 DVFPFNTKSFNIILNGWC-NIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKA 221
D N+ +I+L C + G + + + W EM G+ D V+++ +I KA
Sbjct: 254 DEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKA 313
Query: 222 RNLHKVLRLFDQMKR--------------MGIECDRK---------------------VY 246
L + + LF+Q+++ MG K Y
Sbjct: 314 NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 373
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ L K R V++A+ + + M+ V PNV TYN LI LC+ KL+ A + D+M +
Sbjct: 374 NCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMER 432
Query: 307 RGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G+ P + T + +D + EE + E M C P T+ LI + + +
Sbjct: 433 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 492
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ ++ ++ + G+ P YT+LI + F G+ E+ H+ Y EM P+
Sbjct: 493 AYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 189/452 (41%), Gaps = 57/452 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + + T+I + + + D A +L+DEM+ +V + I +
Sbjct: 222 QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYN---VCIDCFGKA 278
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
V + F+ K + ++ LC+ + +A L + N+ V P
Sbjct: 279 GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKV-PC-AY 336
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N ++ G+ + G EA + +G V++++CI++C K R + + LR+F++
Sbjct: 337 AYNTMIMGYGSA-GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE 395
Query: 234 MKR----------------------------------MGIECDRKVYNAVIHALAKGRLV 259
MKR G+ + N +I L K + +
Sbjct: 396 MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A S+ + M++K PN VT++SLI L K ++D+A +++ML G P Y +
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515
Query: 320 L-DIIRTG--EEVFGLLESMRKMGCQPT---NDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ + G E+ + + M GC P +TY+ + K + +F+ EI+
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR---EINA 572
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNK 428
+G PD SY+ LIH L G E ++ + MKE+ + + D + NK
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632
Query: 429 QFVERQIASLKAHQPQSGQNTRVISKKSDQDR 460
+ + +K H P VI + DR
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 5/287 (1%)
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCN 184
FYA K + + ++ C+ V A L+ K P ++ +++G
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I EA ++ E GI +VV +S +I + K + + + +++ + G+ +
Sbjct: 662 I-DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+N ++ AL K + +A+ +SM++ PN +TY+ LI LC+ RK ++A + EM
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 780
Query: 305 LQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G+ P TY + + + G E GL + G P + +Y +I+ S +
Sbjct: 781 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKA 840
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ + ++ E G + L+ AL LE+A +KE
Sbjct: 841 MDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 128/311 (41%), Gaps = 45/311 (14%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+A K+ G T Y+ +I K K + A+ L++EM+ P++VT
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT--------- 651
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFP 169
G I+ R D +++F +
Sbjct: 652 -------YGSVIDGLAKIDRL-----------------------DEAYMLFEEAKSNGIK 681
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++ +++G+ +G EA + E+ Q+G+ +V +++C++ KA +++ L
Sbjct: 682 LNVVVYSSLIDGF-GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 740
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F MK + ++ Y+ +I+ L + R A + M++ G+ PN +TY ++I L
Sbjct: 741 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 800
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTND 346
KA + EA F G P +Y+A ++ + + + + L E R GC
Sbjct: 801 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 860
Query: 347 TYIMLIKKFSR 357
T ++L+ +
Sbjct: 861 TCVVLLDALHK 871
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 43/263 (16%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL---M 266
+++ +I S+ R +L LF QM+ +G E + ++ +I A+ V A+SL M
Sbjct: 197 AYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEM 256
Query: 267 KS--------------------------------MEEKGVAPNVVTYNSLIKPLCKARKL 294
KS M+ G+ P+ VTY S+I LCKA +L
Sbjct: 257 KSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRL 316
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMRKMGCQPTNDTYI 349
DEA + F+++ Q P Y+ I+ G +E +GLLE + G P+ Y
Sbjct: 317 DEAVELFEQLEQNRKVPCAYAYNTM--IMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYN 374
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++ + R+ +++ E+ + P+ +Y LI L GKL A + +M+
Sbjct: 375 CILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERA 433
Query: 410 QLLPEPKTDELLQDWSYNKQFVE 432
L P T ++ D Q +E
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQKLE 456
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 16/383 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A Y ++ L K KFD A ++ EM P VT TL+ + ++ G
Sbjct: 75 APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF------GS 128
Query: 122 AINAFYAYKR-FKFAVGIED--FQGLLSALC-RYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
AF + + +G D F+ ++ LC +Y +V+ A ++ F FN
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++NG+C A ++ M ++G +V +F+ +I+ KA + + +L ++M
Sbjct: 189 LVINGFCKA-KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + Y+ VI+ L K V DA L + ME + PNVVT+N LI LCKA++++E
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTND-TYIMLI 352
ARQ + M + G +P I TY++ +D + +E F L +++ + G N TY L
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
++ + + ++++ + + G PD ++YT+LI + E + EM K
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427
Query: 413 PEPKTDELLQDWSYNKQFVERQI 435
P T + + ER I
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAI 450
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 159/408 (38%), Gaps = 47/408 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + ++ +I K + D+A+ L++ M P++ T ILI C + V
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFT---FTILITGLCKANRV 235
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNII 178
G A + + + +++ LC+ V DA E + P N + NI+
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 295
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++G C EA +++ M + G D+++++ +I K+ + + +LF + G
Sbjct: 296 IDGLCKA-KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 354
Query: 239 IECDRKV-YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ V Y+ + H A + DA + + +KG +P++ TY SLI CK + E
Sbjct: 355 VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEV 414
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +EM +G P + T A L + G E L +SM GC Y ++++
Sbjct: 415 VELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 474
Query: 355 FSRWRQFGNVFKVWNEI--------------------------------------SENGN 376
+R + V ++ SE G
Sbjct: 475 MARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGF 534
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
SSY L+ L + +EA Q + M PE T ++ W
Sbjct: 535 AAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 582
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 157/343 (45%), Gaps = 22/343 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G A Y+++I L K + D A+ L + E+G S T L Y A+
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP--ESGVSAANAVTYSTLFHGYAAL 373
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-KNVQDAEHLMFCNKDVFPFNTKSF 175
+ A F F+ + + L+ C+ + V+ E + FP +
Sbjct: 374 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433
Query: 176 NIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +L G G+ E A +++ M+ RG D + ++ ++ ++A +K L + +Q+
Sbjct: 434 SAVLGGL--FEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQV 491
Query: 235 --KRMGIECDRK------VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
KR DRK +A++ +L + DA L+ M E+G A V +YN L+
Sbjct: 492 IDKR-----DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLS 546
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQP 343
L + ++ DEA Q F+ M+ G +P I T + + + + +V + L++ M K+GC P
Sbjct: 547 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+T LI + + + K+ E++E G P+ +++ L
Sbjct: 607 DIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 133/303 (43%), Gaps = 45/303 (14%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ I++ G+ + G A ++ EM G + V + ++ A +V+
Sbjct: 8 NKFTYGILIRGFSSA-GDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDA---GRVVEA 63
Query: 231 FDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ + M +C D Y A++HAL K +A +++ M +G AP+ VT+++LI L
Sbjct: 64 LEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 289 CK---------------ARKLDEARQAFDEMLQR---------------------GISPT 312
CK R + + AF+ ++QR G +PT
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 313 IRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ ++ ++ +++ + LLE M + GC P T+ +LI + + G ++
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
++ G P+ +Y+ +I+ L G++++A++ + M+ + P T +L D +
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 430 FVE 432
+E
Sbjct: 304 RIE 306
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES 335
PN TY LI+ A LD A Q +EM G + + + V LE
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 336 MRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
R M C P TY L+ + +F + E+ G PD +++ LI L
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 394 GKLEEA 399
G E+A
Sbjct: 127 GSEEQA 132
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 14/354 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++I LGKV + D A+ + ++M + + + +L I+ + + GR +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL---IKNF---FNHGRKEDGHK 503
Query: 128 AYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
YK D Q L + + C +K + + MF F + +S++I+++G
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G + E ++ M ++G D +++ +I + K ++K +L ++MK G E
Sbjct: 564 KA-GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y +VI LAK + +A L + + K + NVV Y+SLI K ++DEA +E
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++Q+G++P + T+++ LD + EE+ L +SM+++ C P TY +LI + R+
Sbjct: 683 LMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F F W E+ + G P SYT +I L G + EA + K +P+
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 174/372 (46%), Gaps = 15/372 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + + T+I K + D+A +L+DEM+ +V + I + V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN---VCIDSFGKV 251
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNT 172
V A F+ + + ++ LC+ + +A EHL K+ T
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL---EKNRRVPCT 308
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++ G+ + G EA + +G V++++CI++C K + + LR+F+
Sbjct: 309 YAYNTMIMGYGSA-GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFE 367
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+MK+ + YN +I L + + A L SM++ G+ PNV T N ++ LCK++
Sbjct: 368 EMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
KLDEA F++M + +P T+ + +D + + G ++ + + E M C+ + Y
Sbjct: 427 KLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYT 486
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LIK F + + K++ ++ PD + +F G+ E+ + E+K +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSR 546
Query: 410 QLLPEPKTDELL 421
+ +P+ ++ +L
Sbjct: 547 RFVPDARSYSIL 558
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 169/409 (41%), Gaps = 47/409 (11%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
N + K E V VL ++ D A +F W +++ H Y++++ ++ + R
Sbjct: 54 NALSALNFKPQPEFVIGVLRRLK-DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
FD ++ EM GPS+ T + ++ + + + ++FKF
Sbjct: 113 NFDALDQILGEMSVAGFGPSV---NTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFS 169
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ A + V ++ ++ ++ +M
Sbjct: 170 AYTTLIGA---FSAVNHSDMML--------------------------------TLFQQM 194
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G V F+ +I ++K + L L D+MK ++ D +YN I + K V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A +E G+ P+ VTY S+I LCKA +LDEA + F+ + + P Y+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 320 LDIIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
I+ G +E + LLE R G P+ Y ++ + + +V+ E+ ++
Sbjct: 315 --IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKD 372
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ S+Y LI L GKL+ A + M++ L P +T ++ D
Sbjct: 373 A-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVD 420
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 10/306 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K + R Y +I L K + + L M+ E G L T+ I+I +C
Sbjct: 544 KSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK--EQGCVLDTR-AYNIVIDGFCKC 600
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKS 174
V +A K F + + ++ L + + +A +++F N
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA-YMLFEEAKSKRIELNVVI 659
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G+ +G EA + E+ Q+G+ +V +++ ++ KA +++ L F M
Sbjct: 660 YSSLIDGF-GKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K + ++ Y +I+ L K R A + M+++G+ P+ ++Y ++I L KA +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
EA FD G P Y+A ++ + G + F L E R+ G N T ++L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVL 838
Query: 352 IKKFSR 357
+ +
Sbjct: 839 LDTLHK 844
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+ + Y ++I L K+ + D A+ L +E + ++V +L+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID------GF 667
Query: 117 HDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--- 170
VGR A+ + + + LL AL + + + +A + C + +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEA---LVCFQSMKELKCT 724
Query: 171 -NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++ I++NG C + ++ A W EM ++G+ +S++ +IS +KA N+ +
Sbjct: 725 PNQVTYGILINGLCKVRKFNK-AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD+ K G D YNA+I L+ G DA SL + +G+ + T L+ L
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLH 843
Query: 290 KARKLDEA 297
K L++A
Sbjct: 844 KNDCLEQA 851
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 11/276 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
++ K+ G TR Y+ +I K K + A+ L++EM+ P++VT ++ I
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV---ID 630
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDV 167
+ + A F K + + + + L+ + + +A E LM K +
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM--QKGL 688
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N +L+ EA + M + + V++ +I+ K R +K
Sbjct: 689 TP-NVYTWNSLLDALVKA-EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M++ G++ Y +I LAK + +A +L + G P+ YN++I+
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L + +A F+E +RG+ +T LD +
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 165/363 (45%), Gaps = 18/363 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + Y ++ LGK R + L+ EM P++ T I IR +
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV---YTFTICIRV------L 272
Query: 120 GRAINAFYAYKRFK------FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
GRA AY+ F+ + + L+ ALC +++A+ L K +
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I L N G + W +M G DVV+F+ ++ KAR+ + FD
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M++ GI + YN +I L + ++DA+ L+ +ME GV P TY + I K+ +
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+A + F++M +GI P I +A L + G E + +R+ G P + TY M
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++K +S+ Q + +E+ NG PD +LI +L+ G+++EA Q + MK+ +
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 411 LLP 413
L P
Sbjct: 573 LSP 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 10/300 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G A ++ ++A+ GK K + L EM P +T I+I
Sbjct: 815 KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN---IVISSLAKS 871
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+++ +A++ FY F + L+ L + +++A L + P N
Sbjct: 872 NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAI 930
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FNI++NG+ I G + A +++ M GI D+ S++ ++ C A + + L F+++
Sbjct: 931 FNILINGYGKI-GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K G++ D YN +I+ L K + +++A++L M +G+ P++ TYNSL+ L A +
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
++A++ ++E+ G+ P + TY+A + + E + + ++M GC P TY L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA ++ M G D+V+++ +I A L LF +MK G + D+ +Y
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++ + ME G P+VVT+ L+ LCKAR DEA FD M +
Sbjct: 336 ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRK 395
Query: 307 RGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+GI P + TY+ + ++R G E+ LL++M +G QPT TYI I F + + G
Sbjct: 396 QGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGK 455
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + ++ G P+ + A +++L G+L EA + ++E L P+ T
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 170/371 (45%), Gaps = 27/371 (7%)
Query: 43 NDWEAAFTFF-LWAGKQS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
ND+ TF W+ ++ GY + ++ +L K R FD A+A D MR P+L
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAF---------YAYKRFKFAVGIEDFQGLLSALCRY 151
T TL+ + R + D + ++ Y Y F G G
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETG-------- 454
Query: 152 KNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
K V+ E + K + P N + N L + G REA+ ++ + + G+ D V++
Sbjct: 455 KAVETFEKMK--AKGIVP-NIVACNASLYSLAEM-GRLREAKTMFNGLRENGLAPDSVTY 510
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ ++ CYSK + + + L +M R G E D V N++I +L K V +A + M++
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV-- 329
++P VVTYN+L+ L K ++ +A + F+ M+ + SP +++ LD +EV
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVEL 630
Query: 330 -FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+ M M C+P TY +I + + + F ++++ ++ + PD + L+
Sbjct: 631 ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH-PDHVTICTLLP 689
Query: 389 ALFLNGKLEEA 399
L G++ +A
Sbjct: 690 GLVKCGQIGDA 700
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
GI + S++C+I + K LF MK +G D +N ++ K + +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
L K M + P+ +TYN +I L K+ LD+A F +++ PT RTY +D
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ + G EE L E M GC+P + +LI + + +++ + G PD
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
SYT L+ L L G+++EA Y+ E+K L P+
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 6/308 (1%)
Query: 115 AVHDVGRAINAFYAYKRFKFAV-GIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNT 172
++ D RA++ FY+ F + E +L L + V+D A F K + +
Sbjct: 98 SMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDL 157
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ I +I G R+ V +M + G + S++ +I ++ + L ++
Sbjct: 158 DTYLTIFKAL-SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G++ K Y+A++ AL K R + + L+K ME+ G+ PNV T+ I+ L +A
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYI 349
K+DEA + F M G P + TY +D + E L M+ G +P YI
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ KF+ + + W+++ +G PD ++T L+ L +EA + M+++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 410 QLLPEPKT 417
+LP T
Sbjct: 397 GILPNLHT 404
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 47/365 (12%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A+ F K+ G + + Y+ +I L +V + AW L +M+ P T LL
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 108 ILIRRYCAVHD-VGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMF- 162
AVH G+ F YK + + ++S+L + N+ A +
Sbjct: 831 -------AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 163 -CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+ D P +++ +++G + G EA R++ EMS G + F+ +I+ Y K
Sbjct: 884 LVSSDFRP-TPRTYGPLIDGLAKV-GRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +LF +M GI D K Y ++ L V +A+ ++ G+ P+ + Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGC 341
N +I L K+++++EA ++EM RGI P + TY++ + + G + G++E ++M
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM--LNLG--LAGMVEQAKRM-- 1055
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ E+ G PD +Y ALI L+ E A+
Sbjct: 1056 --------------------------YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089
Query: 402 YYMEM 406
Y M
Sbjct: 1090 VYKNM 1094
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 23/338 (6%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHL- 160
L+ L+R C H R + A+ + +F +GI + L+ L + A L
Sbjct: 755 LIPLVRVLCK-HK--RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLF 811
Query: 161 -----MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ C D F FN +L G E ++ EM R D ++++ +I
Sbjct: 812 KDMKNVGCAPDAFTFN------MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
S +K+ NL K L F + + Y +I LAK +++A+ L + M + G
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGL 332
PN +N LI K + A Q F M+ GI P +++Y +D + +E
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
++ G P Y +I + ++ ++NE+ G PD +Y +L+ L L
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQ 429
G +E+A + Y E++ L P+ T + L++ +S ++
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN 1083
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 60/409 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G A + Y+ M+ KV + D A L+ EM P ++ +L+ ++
Sbjct: 499 RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID------SL 552
Query: 117 HDVGRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
+ GR A+ + R K + + + LLS L + VQ A L K P N
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP-N 611
Query: 172 TKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
T SFN +L+ +C + E E +++ +M+ DV++++ +I K ++
Sbjct: 612 TISFNTLLDCFC----KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM------------------- 269
F Q+K+ + D ++ L K + DAIS+ +
Sbjct: 668 WFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGG 726
Query: 270 -------------EEKGVAPNVVTYNSLIKPL----CKARKLDEARQAFDEMLQR-GISP 311
E+ V + +S + PL CK ++ A Q FD+ ++ GISP
Sbjct: 727 TLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786
Query: 312 TIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
T+ +Y+ + + E+ + L + M+ +GC P T+ ML+ + + +F+++
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ PD +Y +I +L + L++A ++ ++ P P+T
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++ I D+ ++ I S L ++ + ++M++ G + YN +IH L +
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A+ + + M +G+ P++ TY++L+ L K R + EM G+ P + T+
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267
Query: 319 FLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ ++ R G +E + + M GC P TY +LI Q N +++ ++ NG
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ PD+ Y L+ G L+ +++ +M+ +P+ T +L D
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 20/353 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ L K+ + ++L +EMR P L T L IL C V+ V A+ A
Sbjct: 94 FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFT---LSILANCLCNVNRVSEALAAMA 150
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
R + + + L+ LC + +A L K N ++ ++ G C
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ-T 209
Query: 187 GSSREAERVWMEM----SQRGI-CYD-VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G+ A ++ EM SQ G+ C V+++S II K + LF++MK G+
Sbjct: 210 GNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMI 269
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D Y+ +IH + L M ++GV P++VT++ LI LCK K+ EA++
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329
Query: 301 FDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ M+QRGI P + TY++ +D + + E+F SM G +P +Y LI
Sbjct: 330 LEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF---LSMPSKGLEPDEISYTTLING 386
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ + + ++NE+ + G P+ ++Y L+ LF GK+ +A + + MK
Sbjct: 387 YCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 14/320 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P++VT TL I+ C H + A F ++ + L+ LC+ NV A
Sbjct: 159 PNVVTYTTL---IKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215
Query: 158 EHL---MFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
L M + + N K +++II++G C + G EA+ ++ EM +G+ DV+S
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV-GREDEAKELFEEMKAQGMIPDVIS 274
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S +I + A + LFD+M G++ D ++ +I L K V +A L++ M
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT--GE 327
++G+ PN++TYNSLI C L+ AR+ F M +G+ P +Y ++ +T +
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E L M ++G P TY L+K + + G+ K++ + G + Y +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 388 HALFLNGKLEEAHQYYMEMK 407
L N L EA + + E+K
Sbjct: 455 DGLCKNDCLFEAMELFNELK 474
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 16/375 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L KV + D A L +EM+ P +++ TL I +C ++ + F
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTL---IHGFCCAGKWDQSKHLFD 296
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ LC+ V +A+ L+ + + P N ++N +++G+C +
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP-NLITYNSLIDGFC-M 354
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G A +++ M +G+ D +S++ +I+ Y K + + + L+++M ++G +
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y ++ L + V DA L M+ GV+ N Y + LCK L EA + F+E+
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
I Y +D + + G E + L E + + G QP TY ++I F + Q
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----- 417
N ++ ++ ENG PD +Y L+ KLEE + +M +K + P +
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Query: 418 DELLQDWSYNKQFVE 432
D L +D Y K+FV+
Sbjct: 595 DMLCKDEKY-KKFVD 608
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 128/286 (44%), Gaps = 5/286 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+++I V ++A L M P ++ TL I YC
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTL---INGYCKTW 391
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
V A+N + + + + + LL L + V DA+ L K N++ +
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I L+G C EA ++ E+ ++ ++SC+I KA L LF+++ +
Sbjct: 452 IFLDGLCKN-DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQ 510
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D YN +IH K V +A L + MEE G P+++ YN+L+ C+ KL+E
Sbjct: 511 EGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEE 570
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
+ +M+Q+ +SP + +D++ E+ ++ + K Q
Sbjct: 571 VIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
SFN +L G I + ++ EM G+ D+ + S + +C + + L
Sbjct: 93 SFNRLLGGLAKI-NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAG 151
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ R G + Y +I L + +A L M++ G PN VTY +LIK LC+
Sbjct: 152 ILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGN 211
Query: 294 LDEARQAFDEML----QRGIS--PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
++ A + EML Q G++ P + TY +D + + G +E L E M+ G P
Sbjct: 212 VNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPD 271
Query: 345 NDTYIMLIKKF---SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+Y LI F +W Q ++F +E+ + G PD +++ LI L GK+ EA +
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLF---DEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328
Query: 402 YYMEMKEKQLLPEPKTDELLQD 423
M ++ ++P T L D
Sbjct: 329 LLEVMIQRGIVPNLITYNSLID 350
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ SF+ ++ +K + ++ L+++M+ G+ D + + + L V +A++ M
Sbjct: 91 ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMA 150
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG 326
+ +G PNVVTY +LIK LC ++ EA + F M + G +P TY + + +TG
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210
Query: 327 EEVFGL------LESMRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L L + G C+P TY ++I + + +++ E+ G P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D SY+ LIH GK +++ + EM ++ + P+ T +L D
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLID 315
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 50/186 (26%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH-----------------A 318
P + ++N L+ L K + ++EM G+SP + T A
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 319 FLDIIRTG---------------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
I+R G E L M+K+GC P TY LIK
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLC- 207
Query: 358 WRQFGNVF-------KVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
Q GNV ++ N+ S+ G P +Y+ +I L G+ +EA + + EMK
Sbjct: 208 --QTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKA 265
Query: 409 KQLLPE 414
+ ++P+
Sbjct: 266 QGMIPD 271
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 172/373 (46%), Gaps = 23/373 (6%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A S Y++++ K+ + D L+ +M + P + QT IL+ + + +
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI---QTYNILVAGFSRANRLDD 317
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
A+ F + + ++ L + +++A+ DV + T ++ G
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTT-----VIKG 372
Query: 182 WCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+ S R EA ++ ++ G +VV+++ +I KA + L+ F+ M
Sbjct: 373 LAD---SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC 429
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
R Y VI L K +++ DA + + M +KG P+ +TY +LI KA K+DEAR+
Sbjct: 430 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 489
Query: 300 AFDEMLQRGISPTIRTY----HAF--LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
D ML +G PT TY H F LD+I +EV + MR+ GC+P + L+
Sbjct: 490 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV---IAQMRERGCEPGLFIFTSLLS 546
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ++V E++ G PD YT+LI LF G++ EA + M EK P
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 606
Query: 414 EPKT-DELLQDWS 425
+ T ++Q++S
Sbjct: 607 DALTYGTIIQNFS 619
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 162/387 (41%), Gaps = 82/387 (21%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L ++ D A L ++++ P++V Y AV D
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVA----------YTAVID--------G 407
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
K + G+++F+ + + C P T ++ ++++G C
Sbjct: 408 LLKAGRIEDGLKNFEDMSGSSC------------------VPTRT-TYTVVIDGLCKA-Q 447
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+A +V+ +M Q+G D ++++ +I +SKA + + +L D M G E Y
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+++H K ++ +A ++ M E+G P + + SL+ + +EA Q EM R
Sbjct: 508 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567
Query: 308 GISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G +P + Y + +D++ TG E + +SM + GC P TY +I+ FS+ GNV
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK---IGNV 624
Query: 365 --------------------------------------FKVWNEISENGNGPDRSSYTAL 386
F V++ + +G P+ ++ L
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
+H LF +GK + A + EM EK +P
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVP 711
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 160/375 (42%), Gaps = 19/375 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G T Y T+I K K D A L+D M P+ VT ++ + +C +
Sbjct: 461 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI---VHGFCKLD 517
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFN 171
+ A + G+ F LLS ++A ++ C DV +
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY- 576
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T +++ + G EA V+ M ++G D +++ II +SK N+ +
Sbjct: 577 TSLIDLLFS-----TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 631
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ M + G+ D YN+++ K V A + M G+ PN VT+N L+ L K
Sbjct: 632 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691
Query: 292 RKLDEARQAFDEMLQRG-ISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDT 347
K D A F EML++ + PT+ +Y +D + + G E F + M G P T
Sbjct: 692 GKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHT 751
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI ++ + K+ ++ + G PD +Y+ALI L + ++ A + EM
Sbjct: 752 YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 811
Query: 408 EKQLLPEPKTDELLQ 422
++ P T ++L+
Sbjct: 812 KRGCAPNEVTYKVLR 826
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 161/389 (41%), Gaps = 55/389 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I K DT + +++EM P +LI C + GR A+
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPD---AAAYFVLIDPLCKL---GRVDEAYE 180
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
++R + + + D F L+ AL + + +A L + P+ ++I
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF-AL 239
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G EA ++ + + + V+++ ++ Y K + L+L QM +ECD
Sbjct: 240 CKA-GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM----VECD 294
Query: 243 R----KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ YN ++ ++ + DA+ L K + G PN TY ++I+ L A++++EA+
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354
Query: 299 QAFDEMLQ-----------------------------RGISPTIRTYHAFLD-IIRTGEE 328
FDE L G SP + Y A +D +++ G
Sbjct: 355 AFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRI 414
Query: 329 VFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
GL E M C PT TY ++I + + + KV+ ++ + G PD +YT L
Sbjct: 415 EDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 474
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
I K++EA + M K PEP
Sbjct: 475 IDGFSKASKMDEARKLLDVMLTKG--PEP 501
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA EM G+ DVV+ + +++ KAR + K + LF +M MG E YN VI
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
LA + +A SM + G P+V+ + +LI CKA + ++ L+R
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FR 121
Query: 311 PTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + Y + + + G + F +LE M GC P Y +LI + + +++
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ++G D ++ LI AL +GKL+EA + Y EM E+ P
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 150/334 (44%), Gaps = 7/334 (2%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K RK D A L EM P++V+ T+ I ++ + A F +
Sbjct: 30 LCKARKIDKAIELFLEMPSMGCEPTIVSYNTV---ISGLASIDKMDEAYKFFNSMIDNGC 86
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ F L+ C+ Q L+ F + + +++G+C G +
Sbjct: 87 EPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKA-GDLDTGFK 145
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ EM G D ++ +I K + + LF++M++ G D + +I AL+
Sbjct: 146 ILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALS 205
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+ +A L + M E+G P + +SLI LCKA K+DEA + + ++ + ++ +
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265
Query: 315 TYHAFLD-IIRTGEEVFGLLESMRKMGCQ--PTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y++ +D + G GL ++ + C P TY +L+ FSR + + +++ +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
S G P+ ++YT +I L+ ++EEA ++ E
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 158/366 (43%), Gaps = 9/366 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G + + Y +I L K + + ++M G P T+ T ++I C
Sbjct: 390 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVP---TRTTYTVVIDGLCKA 446
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SF 175
+ A F + + L+ + + +A L+ P T ++
Sbjct: 447 QMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 506
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++G+C + EA+ V +M +RG + F+ ++S Y + ++ +M
Sbjct: 507 GSIVHGFCKL-DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D +Y ++I L V +A + SM EKG AP+ +TY ++I+ K ++
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A + + M + G+ P Y++ +D + ++ FG+ + M G +P T+ +L+
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685
Query: 353 KKFSRWRQFGNVFKVWNEISENGN-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + F ++ E+ E P SYT LI L G++ EA + EM ++ +
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745
Query: 412 LPEPKT 417
+PE T
Sbjct: 746 IPECHT 751
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+++A+ +K M G+ P+VV N ++ LCKARK+D+A + F EM G PTI +Y+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 319 F---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L I +E + SM GC+P + LI F + Q + N+ +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD YT++IH G L+ + EM +P+
Sbjct: 121 R-PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPD 158
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 15/320 (4%)
Query: 5 VDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS 64
+D++ E ++MR + E G+ + + L+S LS R E A+ L G A
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR--AEEAYQV-LTEMTARGCAPD 572
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
Y ++I +L + A + D M P +T T++ + V G +
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632
Query: 125 AFYAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
K VG + F L+ + + V A + + P N +FN++++
Sbjct: 633 LMA-----KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP-NAVTFNVLMH 686
Query: 181 GWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G G + A ++ EM ++ + +VS++ +I KA + + F +M GI
Sbjct: 687 GLFKD-GKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y ++I++LAK + +A L++ M + GV P+V Y++LI L + +D A
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 805
Query: 300 AFDEMLQRGISPTIRTYHAF 319
F EM++RG +P TY
Sbjct: 806 VFQEMMKRGCAPNEVTYKVL 825
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 177/388 (45%), Gaps = 16/388 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ ++S +L+ + + ++ + ++ + Y+ M+ + + KF+ L D
Sbjct: 221 NARMLSTILAVLGKANQEPLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFD 280
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R I + L+SA
Sbjct: 281 LMRERGCEPDLVSFNTL-INARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACS 339
Query: 150 RYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A ++ C D++ +N I + G C + G +AE+++ ++ RG
Sbjct: 340 RASNLEEAVNVFDDMVAHHCEPDLWTYNAM---ISVYGRCGLSG---KAEQLFNDLESRG 393
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D VS++ + +++ N+ KV + ++M ++G D YN +IH K A+
Sbjct: 394 FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L + M+ G P+V+TY LI L K K++EA EML G+ PT+RTY A +
Sbjct: 454 QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGY 513
Query: 323 IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ V + M + G +P Y +++ R+ + + E+ +G P+
Sbjct: 514 AKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEH 573
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKE 408
S Y ++ L K+E+ + +M+E
Sbjct: 574 SLYELMLRTLGNANKVEDIGRVVRDMEE 601
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISLMKS 268
++ ++ Y+++ +KV LFD M+ G E D +N +I+A L G + + AI L+
Sbjct: 259 YNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTE 318
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG- 326
+ G+ P+++TYN+LI +A L+EA FD+M+ P + TY+A + + R G
Sbjct: 319 VRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGL 378
Query: 327 ----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E++F LES G P +Y + F+R V + E+ + G G D +
Sbjct: 379 SGKAEQLFNDLESR---GFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMT 435
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y +IH G+ + A Q Y +MK P+ T +L D
Sbjct: 436 YNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLID 476
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 180/458 (39%), Gaps = 81/458 (17%)
Query: 37 VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
V S + W AF + W + Y+ + R T++A+LGK + A
Sbjct: 194 VKSVGQESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLA------------ 241
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
+ + R +V + + NA G+ + ++ VQ+
Sbjct: 242 ---------VEVFTRAEPSVENTVKVYNAM---------------MGVYARSGKFNKVQE 277
Query: 157 AEHLM---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
LM C D+ FNT + G + A + E+ + G+ D+++++
Sbjct: 278 LFDLMRERGCEPDLVSFNTLINARLKAGEM----TPNLAIELLTEVRRSGLRPDIITYNT 333
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+IS S+A NL + + +FD M E D YNA+I + L A L +E +G
Sbjct: 334 LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 393
Query: 274 VAPNVVTYNSL------------IKPLC-----------------------KARKLDEAR 298
P+ V+YNS +K +C K + D A
Sbjct: 394 FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
Q + +M G +P + TY +D + +T EE G++ M G +PT TY LI +
Sbjct: 454 QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGY 513
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
++ + + ++ + +G PD+ +Y+ ++ + + A +Y EM ++PE
Sbjct: 514 AKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEH 573
Query: 416 KTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
EL+ N VE ++ + G N + IS
Sbjct: 574 SLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAIS 611
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
R+ E + EM + G D+ ++ ++ Y + K +++ ++K G+E D YN +
Sbjct: 937 RDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNIL 996
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I + K+ + LM M G+ P + TY SL+ K + +++A + F+E+ G
Sbjct: 997 IVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGC 1056
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
YH + I R + L M+ G +PT T +L+ + Q K
Sbjct: 1057 KLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEK 1116
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V + + E Y+++I A NG Q ++KE+ L P+
Sbjct: 1117 VLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPD 1164
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
KD S N +L + G E V E+ G S ++ +++A N+
Sbjct: 843 KDGPSPTVDSINGLLQALI-VDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNI 901
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+V +++ MK G +Y + L +G+ V+D +++ MEE G P++ +NS+
Sbjct: 902 FEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSV 961
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+K + Q + + + G+ P TY+ + + +E L++ MR +G
Sbjct: 962 LKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGL 1021
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P DTY L+ F + + +++ E+ G DRS Y ++ +G +A +
Sbjct: 1022 EPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQR 1081
Query: 402 YYMEMKEKQLLPEPKTDELLQ---DWSYNKQFVERQIASLK 439
+ MK++ + P T LL S Q E+ +++LK
Sbjct: 1082 LFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1122
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 129/331 (38%), Gaps = 42/331 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG Y+T+I+ + + A + D+M P L T ++ + R C +
Sbjct: 320 RRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGR-CGL 378
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
G+A F + F + L A R NV+ KD+
Sbjct: 379 S--GKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKV-------KDI--------- 420
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
C EM + G D ++++ +I Y K L+L+ MK
Sbjct: 421 ------CE-------------EMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKS 461
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D Y +I +L K +++A +M M GV P + TY++LI KA K E
Sbjct: 462 SGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVE 521
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEE--VFGLLESMRKMGCQPTNDTYIMLIK 353
A + FD ML+ G P Y LDI +R E + M G P + Y ++++
Sbjct: 522 AEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLR 581
Query: 354 KFSRWRQFGNVFKVWNEISE-NGNGPDRSSY 383
+ ++ +V ++ E G P SY
Sbjct: 582 TLGNANKVEDIGRVVRDMEEVCGMNPQAISY 612
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 136/303 (44%), Gaps = 5/303 (1%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K ++L+++ + ++ ++ K + + ++ + LCR K V+D E +
Sbjct: 883 ISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAM 942
Query: 161 MFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ ++ F + +N +L + I R+ +++ + + G+ D +++ +I Y
Sbjct: 943 LSEMEEAGFKPDLSIWNSVLKMYV-AIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYC 1001
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
+ + L L D+M+ +G+E Y +++ + K +LV+ A L + ++ G +
Sbjct: 1002 RDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRS 1061
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESM 336
Y+ ++K + +A++ F M G+ PTI T H + + +E +L ++
Sbjct: 1062 FYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNL 1121
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
++ + Y +I + R + + ++ E G PD +T I A L+
Sbjct: 1122 KETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHT 1181
Query: 397 EEA 399
EA
Sbjct: 1182 SEA 1184
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + + K + M++ I +RKV+NA+I A A + A ++ +M + G
Sbjct: 786 VIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDG 845
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVF 330
+P V + N L++ L +L+E E+ G + + LD R G EV
Sbjct: 846 PSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVK 905
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ M+ G P+ Y ++ + R +Q +V + +E+ E G PD S + +++
Sbjct: 906 KIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMY 965
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ Q Y +KE L P+ T +L
Sbjct: 966 VAIDDFRKTTQIYQRIKEDGLEPDEDTYNIL 996
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-KVYNAV 249
EA +V+ +M GI + ++ Y K L D + G + VY V
Sbjct: 727 EASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDV 786
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I A + +L + A S+ +M + + N +N+LI+ + + AR F+ M++ G
Sbjct: 787 IEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGP 846
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SPT+ + + L +I G EE++ +++ ++ +G + + + ++++ F+R V K
Sbjct: 847 SPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKK 906
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ + G P Y + L ++ + EM+E P+
Sbjct: 907 IYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPD 954
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/322 (17%), Positives = 126/322 (39%), Gaps = 41/322 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +GY S Y M +L + ++ A++ EM P L ++L
Sbjct: 912 KAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL--------- 962
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
K V I+DF+ R K +D + ++N
Sbjct: 963 ----------------KMYVAIDDFRKTTQIYQRIK------------EDGLEPDEDTYN 994
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++ +C +E + EM G+ + ++ +++ + K + + + LF++++
Sbjct: 995 ILIVMYCR-DHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1053
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + DR Y+ ++ A L M+++GV P + T + L+ + + E
Sbjct: 1054 TGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQE 1113
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + + + + + Y + +D +R G+ G+ L+ +++ G +P + + I+
Sbjct: 1114 AEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIR 1173
Query: 354 KFSRWRQFGNVFKVWNEISENG 375
S + + N + + G
Sbjct: 1174 AASLSQHTSEAILLLNALRDTG 1195
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 16/199 (8%)
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA+ L L+ + + +G ++ A+I + L +A + M G+ +
Sbjct: 686 KAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASEC 745
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE----- 334
Y S++ CK + A D L + ++D+I E +G L+
Sbjct: 746 LYQSMMLLYCKMGFPETAHHLID--LTETDGTVLNNISVYVDVI----EAYGRLKLWQKA 799
Query: 335 -----SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+MR+ + LI+ ++ + V+N + ++G P S L+ A
Sbjct: 800 ESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQA 859
Query: 390 LFLNGKLEEAHQYYMEMKE 408
L ++G+LEE + E+++
Sbjct: 860 LIVDGRLEELYVVVQELQD 878
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 49/108 (45%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G +EAE+V + + + +S +I Y + + + ++ Q+K G+E D +++
Sbjct: 1109 GQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIW 1168
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
I A + + +AI L+ ++ + G + +PL A L
Sbjct: 1169 TCFIRAASLSQHTSEAILLLNALRDTGFDLPIRLLTEKPEPLVSALDL 1216
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 144 LLSALCRYKNVQ---DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL LC K Q D H+M +K P + ++ ++NG G +A ++ M
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE-GQLDKAYSLFDAML 234
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RG DVV++S IIS SK + + K ++F +M + G+ D +Y +++H K
Sbjct: 235 DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPK 294
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+AI + K M GV P+VVTY +L+ LCK K EAR+ FD +++RG P TY L
Sbjct: 295 EAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 354
Query: 321 DIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
T E+ LL+ M K G Q + + M++ +++ + V++ + + G
Sbjct: 355 HGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLN 414
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD +Y ++ L G++++A + +K + L P
Sbjct: 415 PDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 451
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y ++I+ L K + D A + M P + +L + YC+
Sbjct: 237 GPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL---VHGYCSSGKP 293
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI F R + + L+ LC+ +A + + P +T ++
Sbjct: 294 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST-TYGT 352
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G+ G+ E + M ++G+ F+ I+ Y+K + + L +F M++
Sbjct: 353 LLHGYATE-GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 411
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y V+ L V DA+S S++ +G+APN+V + +LI LC K D+
Sbjct: 412 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKV 471
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ EM+ RGI ++A + ++ + G E L + M ++G +P +TY LI
Sbjct: 472 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 531
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + K+ + NG P +Y +I+ NG++E+ EM K + P
Sbjct: 532 YCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPG 591
Query: 415 PKTDELL 421
T E+L
Sbjct: 592 IVTYEML 598
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ K K D A + MR P +V T+L ++ C V A++ F
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL---CTAGRVDDALSQFN 441
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ K A I F L+ LC C+K W
Sbjct: 442 SLKSEGLAPNIVVFTTLIHGLCT------------CDK----------------W----- 468
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ E + EM RGIC D + F+ I+ K + + LFD M R+GIE + YN
Sbjct: 469 --DKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 526
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I + +A+ L+ M GV P+ VTYN++I + ++++ EM +
Sbjct: 527 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 586
Query: 308 GISPTIRTYHAFL 320
G++P I TY L
Sbjct: 587 GVNPGIVTYEMLL 599
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL- 265
++ ++ +I C + L ++ G+ +++ ++ L R DA+ +
Sbjct: 98 NIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIV 157
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML-QRGISP-TIRTYHAFLD-I 322
++ M E G P++ +Y L+K LC + +A M +G P + Y ++ +
Sbjct: 158 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 217
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+R G ++ + L ++M G P TY +I S+ + +V+ + +NG PD
Sbjct: 218 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW--SYNKQFVERQI-AS 437
YT+L+H +GK +EA + +M + P+ T L D+ K R+I S
Sbjct: 278 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337
Query: 438 L--KAHQPQS 445
L + H+P S
Sbjct: 338 LVKRGHKPDS 347
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 262 AISLMKSMEEKGV---APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI--SPTIRT- 315
AISL M G APN+ TY +I + +LD A ++ G+ SP + +
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139
Query: 316 -YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
D RT + + +L M ++GC+P +Y +L+K + + + ++++
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199
Query: 375 -GNGP-DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G P D +YT +I+ L G+L++A+ + M ++ P+ T
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVT 244
>gi|302143887|emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 170/403 (42%), Gaps = 56/403 (13%)
Query: 22 IEECGIKVSSELVSEVLSWVRND---------WEAAFTFFLWAGKQSGYAHSTREYHTMI 72
++E I+VS LV EVL + + + FF+W+G+Q Y H+ YH ++
Sbjct: 141 LDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMWSGQQENYRHTVNAYHLIM 200
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAFYAY 129
I + +F W L+DEM E G VT +T ILI C + G RA+ F
Sbjct: 201 KIFAESDEFKAMWRLVDEMI--EQGFP-VTARTFQILI---CTCGEAGLARRAVERFVKS 254
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F + + +L H + C K + ++
Sbjct: 255 KNFNYRPFKHSYNAIL-------------HCLLC--------LKQYKLV----------- 282
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
E V+ +M D+++++ ++ + L + RL +++ G D +N +
Sbjct: 283 ---EWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNIL 339
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+H L KG A+ L+ M+E G P+V+ + +LI L +A LD + FDEM++ G
Sbjct: 340 LHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGC 399
Query: 310 SPTIRTYHAFL-DIIRTGEEVF--GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + Y + I GE GL E M G P TY +I+ +F
Sbjct: 400 MPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARS 459
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ E+ G P+ Y L+ L GKL+EAH+ M +K
Sbjct: 460 MLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDK 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 7/297 (2%)
Query: 185 IIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
I S E + +W EM ++G +F +I +A + + F + K
Sbjct: 202 IFAESDEFKAMWRLVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRP 261
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YNA++H L + K + + M + +P+++TYN ++ + KLD+ +
Sbjct: 262 FKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLL 321
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+E+ G SP T++ L ++ G + LL M+++G P+ + LI SR
Sbjct: 322 EELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRA 381
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT- 417
++E+ + G PD YT +I + G+LE A + EM K LP T
Sbjct: 382 GNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTY 441
Query: 418 DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRH 474
+ +++ ++F E + + N V + R + E V+RH
Sbjct: 442 NSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRH 498
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 170/380 (44%), Gaps = 55/380 (14%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V I
Sbjct: 94 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S++I+L C+ G S +A+
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYSILLKSLCDQ-GKSGQADD 207
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C DVV+++ +I C+ K +++K LF +M + GI D Y++V+HA
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267
Query: 253 LAKGRLV-----------------------------------KDAISLMKSMEEKGVAPN 277
L K R + K+A+ + K M + P+
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLE 334
VVT N L+ LCK K+ EAR FD M +G +P + +Y L+ T ++ L +
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P T+ +LIK ++ ++NE+ ++G PD +YT +I AL G
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
K+++A + + +M ++ + P+
Sbjct: 448 KMDDAMEKFNQMIDQGVAPD 467
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 151/332 (45%), Gaps = 10/332 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P + T +LI+ Y + +A+ F + + + +++
Sbjct: 385 LFDLMLGDGIAPDI---YTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIA 441
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + +++ ++ G+C GS +A+ + +E+ G+
Sbjct: 442 ALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTH-GSLLKAKELILEIMNNGM 499
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V FS II+ K + +FD +G D VY+ ++ ++ A+
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALR 559
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PNVV Y +L+ CK ++DE F EMLQ+GI P+ Y+ +D +
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G V ++ M + G TY ++++ F + R F ++ E+ D
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDII 679
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +I +F ++EEA + + L+P
Sbjct: 680 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 12/247 (4%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ N+++ C G +EA V+ M+ +G DV S+ +++ Y+ L + LFD
Sbjct: 330 TLNMLMGSLCKY-GKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDL 388
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M GI D ++ +I A A ++ A+ + M + GV P+VVTY ++I LC+ K
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+D+A + F++M+ +G++P YH + G G L +++ + N+ + I
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQ----GFCTHGSLLKAKELILEIMNNGMRLDIV 504
Query: 354 KFS----RWRQFGNVFKVWN--EISEN-GNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
FS + G + N +++ N G PD Y+ L+ L GK+E+A + + M
Sbjct: 505 FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 564
Query: 407 KEKQLLP 413
+ P
Sbjct: 565 VSAGIEP 571
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ D + N ++ + + +A+ L+
Sbjct: 117 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 176
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-IIRT 325
E G P+V +Y+ L+K LC K +A M + G SP + Y +D +
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R G ++ G PD +Y
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLKAH 441
LI+ G+ +EA + + EM+ +LP+ T +L Y K R + A
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM 356
Query: 442 QPQSGQNTRVISKK 455
+ GQN V S K
Sbjct: 357 K---GQNPDVFSYK 367
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+IA L ++ K D A ++M P K LI+ +C
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYHCLIQGFCTH 481
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ +A + I F +++ LC+ + DA+++ + N P +
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHP-DAVV 540
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++++++G+C ++G +A RV+ M GI +VV + +++ Y K + + L LF +M
Sbjct: 541 YSMLMDGYC-LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599
Query: 235 KRMGIECDRKVYNAVIHALA-----------------------------------KGRLV 259
+ GI+ +YN +I L K R
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCF 659
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+AI L K + V +++T N++I + + R+++EA+ F + + G+ P + T
Sbjct: 660 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 180/432 (41%), Gaps = 37/432 (8%)
Query: 1 AKTLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFL-WAGKQS 59
A +V ILR R + GI + EL+ + + ++A WAG
Sbjct: 15 AADVVSILRGADPAR-----LLATSGIAPTPELLQHLRPALPTLPDSAIPALARWAGAA- 68
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
T +++L R F AW + + L+RRY +
Sbjct: 69 ----------TAVSLLASRRLFAAAWRFL--LFQPAAASPPPPLAAFAPLLRRYARIGRT 116
Query: 120 GRAINAFYAYKRF--KFAV---------GIEDFQGLLSALCRYKNVQDAEHLMFC---NK 165
A+ F +R ++AV + + ALC+ + + A L+
Sbjct: 117 DSAVRTFRFLQRHPGRYAVESDVTPSAEALSPLILTIDALCKEGHPRAAALLVAQIRRED 176
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + + + +NI+LNGW + AE++W M G+ VV++ I + R
Sbjct: 177 DGWAPDVRIYNILLNGWSRARRLDK-AEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPD 235
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L DQM+ GIE + N +++ALA DA +++ GVAPN+ T+NSL+
Sbjct: 236 HAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLV 295
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQ 342
C+ L A + ML RGISPT RTY+ F + + L M G
Sbjct: 296 FGYCRHGDLAGASRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYA 355
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY +LIK + ++ E+ +G PD ++ T LIH L + EEA
Sbjct: 356 PDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAE 415
Query: 403 YMEMKEKQLLPE 414
+ +M E+ ++P+
Sbjct: 416 FEQMFERGMVPQ 427
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G+A R Y+ ++ + R+ D A L MR P++VT T I +C +
Sbjct: 175 EDDGWAPDVRIYNILLNGWSRARRLDKAEKLWAAMRDEGVRPTVVTYGTF---IDAHCVM 231
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
A+ + + ++ AL DA ++ F V P N +
Sbjct: 232 RRPDHAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAP-NIST 290
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN ++ G+C G A RV M RGI +++ + +++ ++ + L+ +M
Sbjct: 291 FNSLVFGYCRH-GDLAGASRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKM 349
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G DR Y+ +I L + ++ + +++ M G P++ T LI LC+ +
Sbjct: 350 VSNGYAPDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQF 409
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL 320
+EA F++M +RG+ P TY +
Sbjct: 410 EEAFAEFEQMFERGMVPQYITYRMLM 435
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 173/386 (44%), Gaps = 17/386 (4%)
Query: 46 EAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
+ A FL+AGK G+ H+ YH+++ L + R FD +L+ ++R + P + +
Sbjct: 61 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN--SYPPIKCGE 118
Query: 105 TLLI-LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
L I L+R Y ++ F F + LL+ L + + D H MF
Sbjct: 119 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF-DLVHAMFK 177
Query: 164 N-KDVFPFNTKSF--NIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
N K+ F F N+++ C N I S A +V E+ G+ ++V+++ I+ Y
Sbjct: 178 NSKESFGITPNIFTCNLLVKALCKKNDIES---AYKVLDEIPAMGLVPNLVTYTTILGGY 234
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
++ R+ ++M G D Y ++ K +A ++M ME+ + PN
Sbjct: 235 VARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 294
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLES 335
VTY +I+ LCK +K EAR FDEML R P +D + +E GL
Sbjct: 295 VTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 354
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M K C P N LI + + K+++E + G+ P +Y LI + G+
Sbjct: 355 MLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTLIAGMCEKGE 413
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELL 421
L EA + + +M E++ P T +L
Sbjct: 414 LTEAGRLWDDMFERKCKPNAFTYNVL 439
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 172/404 (42%), Gaps = 52/404 (12%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG-ETGPSLVTK 103
+E++ FL G S R +T++ +L + ++FD A+ + P++ T
Sbjct: 134 YESSMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTC 192
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-- 161
+L++ C +D+ A + + +L +++ A+ ++
Sbjct: 193 N---LLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 249
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
++ +P + ++ ++++G+C + G EA V +M + I + V++ +I K
Sbjct: 250 MLDRGWYP-DAITYTVLMDGYCKL-GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 307
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME----------- 270
+ + +FD+M D + VI AL + V +A L + M
Sbjct: 308 KKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 367
Query: 271 -----------------------EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+KG P+++TYN+LI +C+ +L EA + +D+M +R
Sbjct: 368 STLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFER 427
Query: 308 GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
P TY+ ++ + + G +E +LE M + GC P T+++L + + + +
Sbjct: 428 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDA 487
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
K+ + NG D+ S+ LFLN + E + + +KE
Sbjct: 488 IKIVSMAVMNGK-VDKESW-----ELFLNKFVGELDKGVLALKE 525
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 132/297 (44%), Gaps = 6/297 (2%)
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN--IIGSSRE 191
F + + +L L R + E LM ++ +P N+ ++ N + G
Sbjct: 77 FTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 136
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR-MGIECDRKVYNAVI 250
+ R+++ + G+ V S + +++ + + V +F K GI + N ++
Sbjct: 137 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 196
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL K ++ A ++ + G+ PN+VTY +++ ++ A++ +EML RG
Sbjct: 197 KALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWY 256
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY +D + G E +++ M K +P TY ++I+ + ++ G +
Sbjct: 257 PDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 316
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
++E+ + PD S +I AL + K++EA + +M + +P+ L W
Sbjct: 317 FDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 373
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM--GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
++S ++ +N+ L++F + G + Y++++ L++ R SLM +
Sbjct: 50 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL-- 107
Query: 272 KGVAPNVVTYNSLIKPLCK----ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
+ P + +L L + A + + + + F + G+ ++R+ + L+++ +
Sbjct: 108 RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 167
Query: 328 EVFGLLESMRK-----MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
F L+ +M K G P T +L+K + + +KV +EI G P+ +
Sbjct: 168 R-FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVT 226
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
YT ++ G +E A + EM ++ P+ T +L D
Sbjct: 227 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMD 267
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 184/411 (44%), Gaps = 15/411 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S +T++ L K + A L +M PSL+T TL+ ++ + V +
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
++ + Y + + + L+ CR +N+ A + + P N+ +++
Sbjct: 218 ELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP-NSVTYST 273
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG CN G EA + EM ++GI V +++ I+ + + + L +MK+
Sbjct: 274 LINGLCNE-GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + Y A+I L++ ++ AI L M ++G+ PN VTYN+LI LC + A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ F M G +TY+ + + G E+ L E M KMG PT TY LI
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ N ++ + + ENG PD +Y L+ GKLE A Y+ EM E L P
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 415 PKTDELLQDWSYNKQFVERQIASLKAHQ-----PQSGQNTRVISKKSDQDR 460
P + L D V+ ++ LK + P VI+ S ++R
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 26/385 (6%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+E+++ V D E+ FF W K+ Y H+ + +M+ L + R F A D +R
Sbjct: 78 VAEIVA-VHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA----DHIR- 131
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+++I+ ++ R + F + LL L +++
Sbjct: 132 -------------ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178
Query: 154 VQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
V+ A +L N + P + +FN ++N + G REAE + ++ Q + DV ++
Sbjct: 179 VEGARNLYKQMLNSGIQP-SLLTFNTLIN-ILSKKGKVREAELILSQIFQYDLSPDVFTY 236
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I + + RNL +FD+M + G + + Y+ +I+ L V +A+ +++ M E
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
KG+ P V TY I LC +EA + M +RG P ++TY A + + R G E
Sbjct: 297 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 356
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
GL M K G P TY LI + +F K+++ + +G+ + +Y +I
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
L L G +E+A + +M + LP
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLP 441
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 8/369 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + + Y +I+ L ++ K + A L +M P+ VT L I C
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL---INELCVG 386
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SF 175
A+ F+ + + + ++ LC +++ A L + P T ++
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++NG+ G+ A R+ M + G D +++ ++S +SK L F +M
Sbjct: 447 NTLINGYLTK-GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ + Y A+I +K V A+SL+K MEE G PNV +YN++I L K +
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLI 352
EA + D+M+++G+ P + TY +D + R G F + M K C P TY LI
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + E+ G PD ++T+LI + G+++ A M +
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCK 685
Query: 413 PEPKTDELL 421
P +T +L
Sbjct: 686 PNYRTYSVL 694
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 53/344 (15%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y+ +I L +F TA + M G SL QT +I+ C
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG---SLANTQTYNEIIKGLCLGG 422
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
D+ +A+ F + + + L++ NV +A L+ C D +
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW--- 479
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N +++G+ G A + EM + G+ + VS++ +I +SK + L L
Sbjct: 480 --TYNELVSGFSKW-GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY---------- 281
+M+ MG + + YNAVI+ L+K +A + M E+G+ PNV+TY
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596
Query: 282 -------------------------NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+SLI LC+ K DEA EM ++G++P T+
Sbjct: 597 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTF 656
Query: 317 HAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ +D ++ + F LL M MGC+P TY +L+K +
Sbjct: 657 TSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M CN N +S+N ++NG EAE++ +M ++G+ +V++++ +I +
Sbjct: 542 MGCNP-----NVESYNAVINGLSKE-NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
++F M++ + Y+++I+ L + +A L+K ME KG+AP+ VT
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 655
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-----DIIRTGEEVFGLLES 335
+ SLI ++D A M+ G P RTY L + + E++F L+++
Sbjct: 656 FTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDN 715
Query: 336 MRKMGCQP 343
+GC P
Sbjct: 716 YF-LGCNP 722
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 15/370 (4%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG H + +A L ++D A L++ + G PS+V +++ A +
Sbjct: 457 SGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSII------AAYGN 510
Query: 119 VGRAINAFYAYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKS 174
G AFYAY +F LL +L R ++ +A ++ D FP +
Sbjct: 511 AGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMA 570
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F ++L+G+ IG+ AE +W EM RG+ D V+F+ I+ + + +F M
Sbjct: 571 FTVLLDGYFR-IGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM 629
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R G + VYN++I K + +A+ L++ M ++G+ P++ T N +I LCK ++
Sbjct: 630 LRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRM 689
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIML 351
A + F +M + G+SP I TY+ +D +V G + M KM G +P TY +
Sbjct: 690 KLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIR 749
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + R+ + E+ G P+ +Y +I+A+ N L+ A ++ +
Sbjct: 750 IHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAV-CNVILDHAMILTAKLLKMAF 808
Query: 412 LPEPKTDELL 421
+P T +L
Sbjct: 809 VPNTVTVNVL 818
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 177/466 (37%), Gaps = 93/466 (19%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ ++VS V++ + F+W G + Y T++ K A ++
Sbjct: 183 LAQDIVSWVVARIGPGRSKNLAAFMWEGHRV-YESDYSVLDTLMRAFVKSEMHFEALEIL 241
Query: 89 DEMR--GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
+MR G PS ++ IL R D G F R F L+
Sbjct: 242 SKMREVGVTPNPSAIS-----ILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLIL 296
Query: 147 ALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
CR + E L+ C DV+ S+NI++N C + G S A + M
Sbjct: 297 EFCRKGWTRIGEALLHVMGKFRCEPDVY-----SYNIVINANC-LKGQSSYALHLLNLMI 350
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G + +F II + K N+ + FD+++ MG+ + VYN +I K R +
Sbjct: 351 ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDIS 410
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKP--------------------------------- 287
A L + M K + P+ +T+N+L+
Sbjct: 411 QANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTV 470
Query: 288 --LCKARKLDEARQAFDEMLQRGISPTI-----------------RTYHAF--------- 319
LC A + DEA + + +L +GI P++ R ++A+
Sbjct: 471 AGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLT 530
Query: 320 ----------LDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+ ++R G +E + L M G TN + +L+ + R +
Sbjct: 531 PSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESL 590
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
WNE+ G PD ++ A I+ L ++G + +A+ + +M K +P
Sbjct: 591 WNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVP 636
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 13/304 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAW-ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G S+ +++ L + D AW AL D + G VT +L+ Y +
Sbjct: 528 GLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFP----VTNMAFTVLLDGYFRIGA 583
Query: 119 VGRAINAFYAYK-RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A + + K R F + F ++ LC + DA + K P N +
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVA-FAAFINGLCISGLMTDAYDVFSDMLRKGFVP-NNFVY 641
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++ G+C + G EA ++ EM++RG+ D+ + + II K + + F M
Sbjct: 642 NSLIGGFCKV-GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMC 700
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
RMG+ D YN +I K V A LM M + G P++ TYN I C RK++
Sbjct: 701 RMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKIN 760
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A +E++ GI P TY+ ++ + + L + KM P T +L+
Sbjct: 761 RAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLS 820
Query: 354 KFSR 357
+F +
Sbjct: 821 QFCK 824
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 112/294 (38%), Gaps = 16/294 (5%)
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
AY FK A +D + + + C ++ AE L F +D+ + IG
Sbjct: 149 AYAFFKLAFK-DDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVAR-----------IG 196
Query: 188 SSREAE-RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
R +M R D ++ + K+ + L + +M+ +G+ +
Sbjct: 197 PGRSKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAI 256
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+ + L + L + KG PN T+N LI C+ M +
Sbjct: 257 SILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGK 316
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P + +Y+ ++ G+ + LL M + GC+P+ T+ +I F +
Sbjct: 317 FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVEL 376
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K ++EI + G + Y +I + +A+ + EM+ K ++P+ T
Sbjct: 377 ARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGIT 430
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 15/358 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDE-MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN-A 125
Y +I +V D A+A + +R G T ++ T L++ C A++ A
Sbjct: 94 YSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAI----TFSPLLKALCDKKRTSEAMDIA 149
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDV---FPFNTKSFNIIL 179
+ + LL LC Q A HL M D +P + S+N ++
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
NG A ++ +M +G+ DVV+++ IIS SKAR + K + +M + G
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+R +N+++H DAI + K M GV P+V TYN+L+ LCK + EAR+
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARK 329
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFS 356
FD M++RG P TY L T + LL+ M + G QP + + +LI ++
Sbjct: 330 IFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT 389
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + +++++ G PD +Y ++ AL + GK+++A + + + L P+
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 22/299 (7%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
F LL ALC K +A + C +VF S+ I+L G C+ S++A
Sbjct: 129 FSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVF-----SYTILLKGLCDE-NRSQQAL 182
Query: 194 RVWMEM-----SQRGICYDVVSFSCIIS-CYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ M ++ G DVVS++ +I+ + R L LFDQM G+ D YN
Sbjct: 183 HLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYN 242
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I AL+K R + A ++ M + G PN +T+NSL+ C + K ++A F M +
Sbjct: 243 SIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD 302
Query: 308 GISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ P + TY+ + + + G E + +SM K G +P + TY L+ ++ +
Sbjct: 303 GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKM 362
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + + NG PD + LI +GK+++A + +M+ + L P+ T ++ D
Sbjct: 363 HHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMD 421
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 16/362 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+++I+ L K R D A ++ M P+ +T +LL YC+
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL---HGYCSSGKP 289
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI F R + + L+ LC+ +A + + P N+ ++
Sbjct: 290 NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP-NSATYGT 348
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G+ GS + + M + GI D F+ +I Y+K + + LF +M+R
Sbjct: 349 LLHGYATE-GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQ 407
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y V+ AL V DA++ + +G+ P+ V + +LI LC K D+A
Sbjct: 408 GLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKA 467
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ EM+ RGI P ++ L+ ++ + +F L M ++ Q TY L
Sbjct: 468 EELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL---MVRVDVQRDVITYNTL 524
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + K+ + +G P+ +Y +I+ NG++E+A + +M K +
Sbjct: 525 IDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGV 584
Query: 412 LP 413
P
Sbjct: 585 NP 586
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 158/394 (40%), Gaps = 45/394 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ +I K K D A L +MR P VT I++ C V V A+ F
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYG---IVMDALCMVGKVDDAMAQFG 437
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
F+ L+ LC AE L + + P N FN +LN C
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP-NNIFFNTLLNHLCKE 496
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A+ ++ M + + DV++++ +I Y + + +L + M G++ +
Sbjct: 497 -GMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ K ++DA SL + M KGV P +VTY+++++ L +AR+ A++ + M+
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI 615
Query: 306 QRGISPTI-----------------------------------RTYHAFLDIIRTG---E 327
+ GI I RT++ +D + G +
Sbjct: 616 KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E L S+ G P TY +++K + ++ + +NG + AL+
Sbjct: 676 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
L G++ +A Y ++ E E T E L
Sbjct: 736 GKLLQKGEVRKAGVYLSKIDENNFSLEASTAESL 769
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 146/335 (43%), Gaps = 20/335 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNK 165
ILI Y V A+ F +R + ++ ALC V DA + ++
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSRE----AERVWMEMSQRGICYDVVSFSCIISCYSKA 221
+ P + F +++G C +R+ AE + +EM RGIC + + F+ +++ K
Sbjct: 443 GLTP-DAVVFRNLIHGLC-----ARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKE 496
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + +FD M R+ ++ D YN +I V +A L++ M GV PN VTY
Sbjct: 497 GMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTY 556
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES---MRK 338
N++I CK ++++A F +M +G++P I TY L + E M K
Sbjct: 557 NTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIK 616
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G + TY +++ + + +++ + + ++ +I AL G+ +E
Sbjct: 617 SGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDE 676
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
A + + + L+P ++ W K +E+
Sbjct: 677 AKDLFASLLARGLVP-----NVVTYWLMMKSLIEQ 706
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL- 265
+++++S +I C S+ +L ++ R G + ++ ++ AL + +A+ +
Sbjct: 90 NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML-----QRGISPTIRTYHAFL 320
++ M G PNV +Y L+K LC + +A M+ + G P + +Y+ +
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 321 D-IIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ ++R G ++ + L + M G P TY +I S+ R V + +NG
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
P+R ++ +L+H +GK +A + M + P+ T L +
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSM---EEKGVAPNVVTYNSLIKPLCKARKLD 295
++ +R + +A H+ A AISL + M V PN++TY+ +I + LD
Sbjct: 55 VDLNRALSDAARHSPAV------AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
A A +++ G + T+ L D RT E + L M +GC P +Y +L
Sbjct: 109 LAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTIL 168
Query: 352 IKKF---SRWRQFGNVFKVW--NEISENGNGPDRSSYTALIHALFLNGK-LEEAHQYYME 405
+K +R +Q ++ + + G PD SY +I+ L G+ L+ A+ + +
Sbjct: 169 LKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQ 228
Query: 406 MKEKQLLPEPKT 417
M ++ L P+ T
Sbjct: 229 MLDQGLSPDVVT 240
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---ILIRRYCAVHDVGRAIN 124
Y+TMI K + + A++L +M P +VT T+L RR A + +
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAA----AKELY 611
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN--TKSFNIILNGW 182
+ KF +G + +L LC+ DA + F N + F+ ++FNI+++
Sbjct: 612 LWMIKSGIKFDIGTYNI--ILLGLCQNNCTDDALRI-FQNLYLIDFHLENRTFNIMIDAL 668
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G EA+ ++ + RG+ +VV++ ++ + L ++ LF +++ G +
Sbjct: 669 LKG-GRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAN 727
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
++ NA++ L + V+ A + ++E + T SL+ L + K D+ A
Sbjct: 728 SRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL-LVSSGKYDQHINAIP 786
Query: 303 EMLQRGISPTIRT 315
E + P ++T
Sbjct: 787 EKYR----PVVKT 795
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 117/320 (36%), Gaps = 77/320 (24%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K+D A L EM G P+ + TLL C V RA N F R +
Sbjct: 463 KWDKAEELAVEMIGRGICPNNIFFNTLL---NHLCKEGMVARAKNIFDLMVRVDVQRDVI 519
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+ C + V +A L+ V P N ++N ++NG+C G +A ++
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKP-NEVTYNTMINGYCKN-GRIEDAFSLFR 577
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNL--------------------------------- 224
+M+ +G+ +V++S I+ +AR
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637
Query: 225 --HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR----------------LVKDAIS-- 264
LR+F + + + + +N +I AL KG LV + ++
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697
Query: 265 -LMKSM----------------EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+MKS+ E+ G N N+L+ L + ++ +A ++ +
Sbjct: 698 LMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDEN 757
Query: 308 GISPTIRTYHAFLDIIRTGE 327
S T + + ++ +G+
Sbjct: 758 NFSLEASTAESLVLLVSSGK 777
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 23/381 (6%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
+ WV WE +SG + + MI L K +K + + + +M
Sbjct: 75 VGWVDLAWEIYQEVV-----RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVF 129
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC------RY 151
P +VT TL I YC + A + + + +++ LC R
Sbjct: 130 PDVVTYNTL---INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186
Query: 152 KNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
K V D + + D T ++NI+L C + +AER++ EM +G+ D+VSF
Sbjct: 187 KGVLDEMLKIGMSPD-----TATYNILLVECCRN-DNMMDAERIFDEMPSQGVVPDLVSF 240
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S +I SK L + L+ F MK G+ D +Y +I + ++ +A+ + M E
Sbjct: 241 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
+G +VVTYN+++ LCK + L EA + F EM +RG+ P T+ ++ + G +
Sbjct: 301 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 360
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L E M + +P TY LI F + + V ++WN++ P+ SY LI+
Sbjct: 361 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 420
Query: 389 ALFLNGKLEEAHQYYMEMKEK 409
G + EA + + EM EK
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEK 441
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
RE + + +G+C + + + ++ K + ++ ++ R G++ + N +
Sbjct: 44 REGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIM 103
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+AL K + +++ S + MEEKGV P+VVTYN+LI C+ L+EA + D M +G+
Sbjct: 104 INALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGL 163
Query: 310 SPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY+A ++ + +TG+ G+L+ M K+G P TY +L+ + R + +
Sbjct: 164 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 223
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++E+ G PD S++ALI L NG L++A +Y+ +MK L P+
Sbjct: 224 IFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 170/401 (42%), Gaps = 53/401 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+ ++ + A + DEM P LV+ L+ L+ + +
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD-- 254
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK------NVQDAEHLMFCNKDVFPFNTK 173
+A+ F K A + L+ CR V+D C DV +NT
Sbjct: 255 -QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT- 312
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
ILNG C S EA+ ++ EM++RG+ D +F+ +I+ YSK N++K + LF+
Sbjct: 313 ----ILNGLCKEKMLS-EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367
Query: 234 MKRMGIECDRKVYNAVIHALAKGR-----------------------------------L 258
M + ++ D YN +I KG
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A L M EKG ++T N+++K C+A +A + ML +GI P TY+
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ E + F L+ M G P TY +++ FSR + + ++ E G
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
PDRS+YT+LI+ L+EA + + EM ++ +P+ K
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 145/356 (40%), Gaps = 42/356 (11%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKD 166
+L+R Y + AF K V I LL L + V A E +
Sbjct: 32 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 91
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLH 225
N + NI++N C E + ++ +M ++G+ DVV+++ +I+ Y + L
Sbjct: 92 GVQVNVYTLNIMINALCK--NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L D M G++ YNA+I+ L K A ++ M + G++P+ TYN L+
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQ 342
C+ + +A + FDEM +G+ P + ++ A + ++ ++ M+ G
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG------------NG------------- 377
P N Y +LI F R KV +E+ E G NG
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329
Query: 378 ----------PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD ++T LI+ +G + +A + M ++ L P+ T L D
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++ ++ + R +++ + ++ KG+ ++ NSL+ L K +D A + + E+
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ G+ + T + ++ + + E L M + G P TY LI + R
Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
F++ + +S G P +Y A+I+ L GK A EM + + P+ T +L
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFG 331
N + ++ L++ +ARKL E +AF + +G+ +I ++ L +++ G + +
Sbjct: 24 GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 83
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ + + + G Q T ++I + ++ N +++ E G PD +Y LI+A
Sbjct: 84 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 143
Query: 392 LNGKLEEAHQYYMEMKEKQLLP 413
G LEEA + M K L P
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKP 165
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A Y+T++ L K + A AL DEM P T TL I +C
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL---IHGHCKEG 444
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
++G+A++ F + I + L+ C+ ++ A L ++ +FP N S+
Sbjct: 445 NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFP-NHISY 503
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++NG+CN+ G EA R+W EM ++GI +V+ + +I Y ++ +L K +M
Sbjct: 504 AILVNGYCNL-GFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMI 562
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I+ KG + A L+ ME KG+ P+VVTYN ++ C+ ++
Sbjct: 563 SEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQ 622
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTND 346
EA +M++RGI P TY ++ + + E F + M + G P +D
Sbjct: 623 EAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 170/382 (44%), Gaps = 17/382 (4%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
+ WV WE +SG + + M+ L K K D + +M
Sbjct: 163 MGWVDLAWEVYNEI-----ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIF 217
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNV 154
+VT TL I YC +G A + + + +++ LC RY
Sbjct: 218 ADIVTYNTL---INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274
Query: 155 QDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+ + M + + P +T ++N +L C + EA+ ++ +M RG+ D++SFS +
Sbjct: 275 KGVFNEML-SIGLSP-DTTTYNTLLVESCRN-NNFLEAKDIFSDMLHRGVSPDLISFSSL 331
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I S+ +L + L F MK G+ D +Y +I+ + ++ +A+ + M E+G
Sbjct: 332 IGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGC 391
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFG 331
A +VV YN+++ LCK + L +A FDEM++RG+ P T+ + + G +
Sbjct: 392 ALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALS 451
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L M + +P TY +LI F + + ++WNE+ P+ SY L++
Sbjct: 452 LFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYC 511
Query: 392 LNGKLEEAHQYYMEMKEKQLLP 413
G + EA + + EM K + P
Sbjct: 512 NLGFVSEAFRLWDEMIRKGIKP 533
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 165/360 (45%), Gaps = 10/360 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + ++I + + D A +M+ P V ILI YC +
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYT---ILINGYCRNGMM 376
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ A+ + + +L+ LC+ K + DA L + V P + +F
Sbjct: 377 SEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVP-DFCTFTT 435
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C G+ +A ++ M+Q+ I D+V+++ +I + K + K L+++M
Sbjct: 436 LIHGHCKE-GNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR 494
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
I + Y +++ V +A L M KG+ P +VT N++IK C++ L +A
Sbjct: 495 KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKA 554
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M+ G+ P TY+ ++ GE + F L+ M G QP TY +++
Sbjct: 555 DEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F R + + ++ E G PDRS+YT LI+ L+EA +++ EM ++ +P+
Sbjct: 615 FCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 28/372 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+T++ + F A + +M P L++ +L+ + R
Sbjct: 285 GLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRN------ 338
Query: 120 GRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
G A ++ K + + D + L++ CR + +A + C DV +
Sbjct: 339 GHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAY 398
Query: 171 NTKSFNIILNGWCN--IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
NT ILNG C ++ +A ++ EM +RG+ D +F+ +I + K N+ K L
Sbjct: 399 NT-----ILNGLCKKKLLA---DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
LF M + I+ D YN +I K ++ A L M + + PN ++Y L+
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTN 345
C + EA + +DEM+++GI PT+ T + + R+G+ + L M G P +
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI F + F + N++ G PD +Y +++ G+++EA +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630
Query: 406 MKEKQLLPEPKT 417
M E+ + P+ T
Sbjct: 631 MIERGIDPDRST 642
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 42/356 (11%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKD 166
+LIR Y + + F +R F V I LL L + V A E +
Sbjct: 120 LLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS 179
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
N + NI++N C + + ++M Q+GI D+V+++ +I+ Y + L +
Sbjct: 180 GIELNVYTLNIMVNALCKD-HKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGE 238
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + M G++ YNAVI+ L K GR V+ A + M G++P+ TYN+L+
Sbjct: 239 AFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR-AKGVFNEMLSIGLSPDTTTYNTLL 297
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQ 342
C+ EA+ F +ML RG+SP + ++ + + + R G ++ M+ G
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV 357
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKV----------------------------------- 367
P N Y +LI + R ++
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++E+ E G PD ++T LIH G + +A + M +K + P+ T +L D
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 187 GSSREAERVWMEMSQRGIC-YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G SR E V +S C D + F +I Y +AR L++ F ++R G
Sbjct: 94 GVSR-VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINA 152
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
N+++ L K V A + + G+ NV T N ++ LCK K+D+ + +M
Sbjct: 153 CNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDME 212
Query: 306 QRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
Q+GI I TY+ ++ R G E F ++ SM G +PT TY +I + ++
Sbjct: 213 QKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V+NE+ G PD ++Y L+ N EA + +M + + P+
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 16/354 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K + D A+ L EM P ++T TL+ C G+ + AF
Sbjct: 153 YSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI------CGFCLAGQLMEAFG 206
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
I + L+ LC+ V+++++L+ K V P + ++I+++G+
Sbjct: 207 LLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP-DVVIYSILMDGY 265
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C ++G ++A+++++ M Q G+ DV S++ II+ K + + + + L +M + D
Sbjct: 266 C-LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPD 324
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y+++I L K + + L K M +G N+VTYNSL+ LCK + LD+A F
Sbjct: 325 TVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFM 384
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M +RGI P TY A +D + G + L + + G TY ++I +
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEG 444
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F + +++ +NG P+ ++ +I +L + ++A + EM K LLP
Sbjct: 445 MFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 163/398 (40%), Gaps = 47/398 (11%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E+ ++ L K++ + T +L +M P LVT L ILI +C + + + +
Sbjct: 12 EFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVT---LSILINCFCHLGQMAFSFSVL 68
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ + H F +K V F + S+ I+LNG C
Sbjct: 69 GKILKLGYQPNTIILNTLMKGLCLKGEVKKSLH--FHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G +R A ++ + R DVV +S II K + + + L+ +M GI D
Sbjct: 127 KI-GETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y +I + +A L+ M K + PN+ TYN+LI LCK K+ E++
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 304 MLQRGISPTIRTYHAFLD-----------------IIRTG-------------------- 326
M ++G+ P + Y +D +++TG
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E LL M P TY LI + + + + E+ G + +Y +
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L+ L N L++A +M+MKE+ + P T L D
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++ F I+ K ++ V+ L QM+ GI D + +I+ + + S++
Sbjct: 10 IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G PN + N+L+K LC ++ ++ D+++ +G +Y L+ + + G
Sbjct: 70 KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129
Query: 327 EE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL ++ +P Y +I + + + +++E++ G PD +YT
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI L G+L EA EM K + P T L D
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 191/425 (44%), Gaps = 50/425 (11%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ ND +AF+ F K+ G + Y +I L +V + D + +MR + P
Sbjct: 16 LNNDVNSAFSVFNMMPKK-GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYP-- 72
Query: 101 VTKQTLLILIRRYCAVHDVGR---AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
T +T +++ A+ + GR AIN F + I + +++A+C+ +++
Sbjct: 73 -TVRTYTVIVH---ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWC--NIIGSSREA------------ERVWME--- 198
++ K + P + ++N +++G+C ++ +++E ER + E
Sbjct: 129 RRILDEMVEKGLVP-SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELIC 187
Query: 199 -----------------MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
M + + VV+++ +I K L RL + M G+
Sbjct: 188 GFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVP 247
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D+ Y+ I L K +++A L S++EKG+ N V Y +LI CKA K+D+A
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307
Query: 302 DEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
D ML P TY+A +D + R +E L+ESM + G + T TY +LI +
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKE 367
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
F ++ +++ +G PD YTA IHA G ++EA M E+ ++P+ T
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427
Query: 419 ELLQD 423
L+ D
Sbjct: 428 TLVID 432
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 17/269 (6%)
Query: 178 ILNGWC--------NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++NG+C N+ A V+ M ++G + VS++ +I + + + +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +M+ + Y ++HAL + +AI+L M E+G PN+ TY +I +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQP 343
K KL+E R+ DEM+++G+ P++ TY+A +D ++ +E+ L+ S C P
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS---CNP 177
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LI F R + + +++ E+ P +Y +LIH G L+ A++
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237
Query: 404 MEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
M E ++P+ T + D K +E
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIE 266
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 153/390 (39%), Gaps = 39/390 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+S S Y+++I K+ D+A+ L++ M P + T + I C
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD---QWTYSVFIDTLCKKG 263
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A F + K + L+ C+ + DA L+ +D P N+ ++
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP-NSSTY 322
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G C +EA + M Q+G+ V +++ +I K + R+ DQM
Sbjct: 323 NALIDGLCKE-RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G + D +Y A IHA +K+A +M M E+GV P+ +TY +I L+
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441
Query: 296 EARQAFDEMLQRGISPTIRTYHA---------------------------FLDI-----I 323
A M G P+ TY F D+ +
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E L E M + GC P +TY LI + + G K+++ ++E G P + Y
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+L++ G +A + M E LP
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-- 316
V A S+ M +KG N V+Y +LI LC+ ++DE F +M + PT+RTY
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 317 --HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
HA + R E + L MR+ GC+P TY ++I + + ++ +E+ E
Sbjct: 80 IVHALFESGRRMEAI-NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER 433
G P +Y ALI G +E A + M P +T +EL+ + K+ V R
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC-RKKNVHR 197
Query: 434 QIASL 438
+A L
Sbjct: 198 AMALL 202
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 160/402 (39%), Gaps = 45/402 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + Y +I K K D A +L+D M + P+ T L I C
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL---IDGLCKE 332
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A+ + + + + L+ A+ + + A ++ + P +
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP-DVYI 391
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ ++ +C G+ +EAE + M +RG+ D ++++ +I Y L+ FD +
Sbjct: 392 YTAFIHAFCTR-GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA---FDVL 447
Query: 235 KRM---GIECDRKVYNAVIHALAKGRLVK-----------------------------DA 262
KRM G + Y+ +I L K L K A
Sbjct: 448 KRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETA 507
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L + M E G +PN+ TY LI LCK +L A++ FD M +RG+SP+ Y++ L+
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567
Query: 323 ---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ + L+ +M + G P ++ +L V++ + + G D
Sbjct: 568 CCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDD 627
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ LI L NG + + M+ + P+T +L
Sbjct: 628 EVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRML 669
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A ++ +M + G ++ +++ +I K L +LFD M G+ +YN++++
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ + DA+ L+ +M E G P + + N L L + ++A+ F +LQ G +
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ +D +++ G + LL M GCQ TY MLI+
Sbjct: 627 DEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 168/354 (47%), Gaps = 14/354 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++I LGK + D A++L ++M P + +L IR + GR +
Sbjct: 232 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL---IRSF---FKCGRKEDGHK 285
Query: 128 AYKRFKFAVGIEDFQGLLSAL-CRYKNVQ-DAEHLMF--CNKDVFPFNTKSFNIILNGWC 183
YK D + + + C +K + + +F N F + +S++I+++G
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G + E ++ M ++G D +++ +I + K+ ++K +L ++MK G
Sbjct: 346 KA-GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y +VI LAK + +A L + + G+ NVV Y+SLI K ++DEA +E
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++Q+G++P + T++ LD + EE+ L +SM+ + C P TY +LI R R+
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F F W E+ + G P+ +YT +I L G + EA + K +P+
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPD 578
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 186/439 (42%), Gaps = 60/439 (13%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPS------LVTKQTLLILIR- 111
SG+ S+ ++A K RK A+ +I MR + P+ L+ K L++L
Sbjct: 4 SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPW 63
Query: 112 RYCAVHDVGRAINAF------------YAYKRFKFAVG----IEDFQGLLSALCRYKNVQ 155
C + + A+ F YAY G ++ GLL R K
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLE---RQKA-- 118
Query: 156 DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFS 212
K P + ++N IL +G R EA R++ EM +R +V +++
Sbjct: 119 ---------KGSIP-SVIAYNCILT----CLGKKRRVEEALRIFEEM-KRDAVPNVPTYN 163
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + L+ L + D M+R G+ + N +I L K + +++A S+ + M++K
Sbjct: 164 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEV 329
PN VT++SLI L K ++D+A +++ML G P Y + + + G E+
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283
Query: 330 FGLLESMRKMGCQP---TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ + M GC P +TY+ + K + +F+ EI+ +G PD SY+ L
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR---EINAHGFIPDARSYSIL 340
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNKQFVERQIASLKAH 441
IH L G E ++ + MKE+ + + D + NK + + +K H
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400
Query: 442 QPQSGQNTRVISKKSDQDR 460
P VI + DR
Sbjct: 401 PPTVVTYGSVIDGLAKIDR 419
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 5/287 (1%)
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCN 184
FYA K + + ++ C+ V A L+ K P ++ +++G
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I EA ++ E GI +VV +S +I + K + + + +++ + G+ +
Sbjct: 417 I-DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 475
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+N ++ AL K + +A+ +SM++ PN +TY+ LI LC+ RK ++A + EM
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 535
Query: 305 LQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G+ P TY + + + G E GL + G P + +Y +I+ S +
Sbjct: 536 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKA 595
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ + ++ E G + L+ AL LE+A +KE
Sbjct: 596 MDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 642
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 128/311 (41%), Gaps = 45/311 (14%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+A K+ G T Y+ +I K K + A+ L++EM+ P++VT
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT--------- 406
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFP 169
G I+ R D +++F +
Sbjct: 407 -------YGSVIDGLAKIDRL-----------------------DEAYMLFEEAKSNGIK 436
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++ +++G+ +G EA + E+ Q+G+ +V +++C++ KA +++ L
Sbjct: 437 LNVVVYSSLIDGF-GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 495
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F MK + ++ Y+ +I+ L + R A + M++ G+ PN +TY ++I L
Sbjct: 496 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 555
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTND 346
KA + EA F G P +Y+A ++ + + + + L E R GC
Sbjct: 556 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 615
Query: 347 TYIMLIKKFSR 357
T ++L+ +
Sbjct: 616 TCVVLLDALHK 626
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 15/340 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
TL I+I +C A + + + F L+ L V +A L+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C DV +N+ I+NG C G + A + +M +R + DV ++S II
Sbjct: 185 VENGCQPDVVTYNS-----IVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + + LF +M+ GI+ YN+++ L K D L+K M + + PNV
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
+T+N L+ K KL EA + + EM+ RGISP I TY+ +D + E +L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + C P T+ LIK + ++ + KV+ IS+ G + +Y+ L+ +GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
++ A + + EM +LP+ T +L D + +E+ +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 47/405 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL------------- 106
GY T ++T+I L K A L+D M P +VT ++
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 107 LILIRR------------YCAVHD-------VGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
L L+R+ Y + D + AI+ F + + + L+
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ D L+ ++++ P N +FN++L+ + G +EA ++ EM RGI
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKE-GKLQEANELYKEMITRGIS 330
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++++++ ++ Y L + + D M R D + ++I + V D + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+++ ++G+ N VTY+ L++ C++ K+ A + F EM+ G+ P + TY LD +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E+ + E ++K Y +I+ + + + + ++ + G P+ +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I L G L EA+ +M+E P D +YN
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAP--------NDCTYN 547
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 8/277 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ + K K A L EM P+++T TL+ YC + + A N
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM---DGYCMQNRLSEANNMLD 357
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
R K + I F L+ C K V D + +K N +++I++ G+C
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS- 416
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + AE ++ EM G+ DV+++ ++ L K L +F+ +++ ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + KG V+DA +L S+ KGV PNV+TY +I LCK L EA +M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMG 340
G +P TY+ + +R G+ L+E M+ G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
TK FN++L+ +C ++ GI +++ + + +I+C+ + +
Sbjct: 101 TKQFNLVLD-FCK-------------QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++ ++G E D +N +I L V +A+ L+ M E G P+VVTYNS++ +C++
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
A +M +R + + TY +D + R G + L + M G + + TY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L++ + ++ + + ++ P+ ++ L+ GKL+EA++ Y EM
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 409 KQLLPEPKTDELLQD 423
+ + P T L D
Sbjct: 327 RGISPNIITYNTLMD 341
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM + +V FS S ++ + + VL Q++ GI + N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + A S++ + + G P+ T+N+LIK L K+ EA D M++ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY++ ++ I R+G+ LL M + + TY +I R +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ G +Y +L+ L GK + +M ++++P T +L D
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM- 161
K T +L+ V A+ R F I + L+S LC+ V +A ++
Sbjct: 301 KYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLN 360
Query: 162 -FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+D P NT ++N I++ C EA ++ + ++ +GI DV +++ +I
Sbjct: 361 QMIERDCSP-NTVTYNTIISTLCKE-NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDAISLMKSMEEKGVAPNVV 279
+RN + L+ +MK G D YN +I +L +G+L ++A++L+K ME G A NV+
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL-QEALNLLKEMEVSGCARNVI 477
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESM 336
TYN+LI CK +++ EA + FD+M +G+S TY+ +D + EE L++ M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P TY L+ F + + ++ +G PD +Y LI L G++
Sbjct: 538 IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597
Query: 397 EEAHQYY--MEMKEKQLLP 413
E A + ++MK L P
Sbjct: 598 EAATKLLRTIQMKGINLTP 616
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 19/367 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y+++I+ L K+ + D A ++++M + P+ VT T+ I C +
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI---ISTLCKEN 385
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
V A + + L+ LC +N A L C+ D F
Sbjct: 386 QVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF--- 442
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N++++ C G +EA + EM G +V++++ +I + K + + + +F
Sbjct: 443 --TYNMLIDSLC-FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIF 499
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
DQM+ G+ + YN +I L K V++A LM M +G+ P+ TYNSL+ CKA
Sbjct: 500 DQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKA 559
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+ +A M G P I TY + + + G E LL +++ G T Y
Sbjct: 560 GDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG-KLEEAHQYYMEMK 407
+I+ R ++ +++ E+ E PD +Y + L G + EA + MEM
Sbjct: 620 NPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEML 679
Query: 408 EKQLLPE 414
E+ +PE
Sbjct: 680 ERGYVPE 686
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 177/440 (40%), Gaps = 80/440 (18%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D A F WA KQ + S+ + ++ LGK +FD ++ EM+ S++
Sbjct: 68 DSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMK---ISLSVIDN 124
Query: 104 QTLLILIRRYCA-----------------------VHDVGRAINAFYAYKRFKFA----- 135
+LL+ I Y + H +N + K
Sbjct: 125 DSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHS 184
Query: 136 --------VGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWC-- 183
+ F L+ ALCR ++ A LM +D + P + K+F I+ G+
Sbjct: 185 NMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLP-DEKTFTTIMQGFIEE 243
Query: 184 -NIIGSSR-------------------------------EAERVWMEMSQR-GICYDVVS 210
N+ G+ R EA R EMS R G D +
Sbjct: 244 GNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYT 303
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F+ +++ SK ++ L + D M R G + D YN++I L K V +A+ ++ M
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGE 327
E+ +PN VTYN++I LCK +++EA + + +GI P + TY++ + + R
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L + M+ GC P TY MLI + + E+ +G + +Y LI
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483
Query: 388 HALFLNGKLEEAHQYYMEMK 407
N ++ EA + + +M+
Sbjct: 484 DGFCKNKRIAEAEEIFDQME 503
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 43/262 (16%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG A + Y+T+I K ++ A + D+M + VT T
Sbjct: 470 SGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT------------- 516
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
L+ LC+ + V++A LM + + P + ++N
Sbjct: 517 -------------------------LIDGLCKSERVEEASQLMDQMIMEGLRP-DKFTYN 550
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L +C G ++A + M+ G D+V++ +I+ KA + +L ++
Sbjct: 551 SLLTYFCK-AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQM 609
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK-ARKLD 295
GI YN VI AL + + K+A+ L + M EK AP+ VTY + + LC+ +
Sbjct: 610 KGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIG 669
Query: 296 EARQAFDEMLQRGISPTIRTYH 317
EA EML+RG P +++
Sbjct: 670 EAVDFVMEMLERGYVPEFSSFY 691
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 166/363 (45%), Gaps = 21/363 (5%)
Query: 37 VLSWVRNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
V +VRN T F++ +GY + T++ L K F +A L+++M
Sbjct: 353 VNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412
Query: 96 TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
P+L T ILI +C + A F++ + L+SALC++ +
Sbjct: 413 CKPNL---NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIH 469
Query: 156 DAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
+A MF C D+F FN+ F G C + +A ++ +M G+ +
Sbjct: 470 EALD-MFGEMSSKGCKPDIFTFNSLIF-----GLCR-VDEMEDALALYRDMVLEGVIANS 522
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V+F+ +I + + + + L+L + M G D YN +I AL K V+ + L +
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG- 326
M KG+ P+++T N LI C A K+ A + +M+ RG SP I TY++ ++ + + G
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E L E ++ G QP + TY LI R F + + ENG P+ ++
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702
Query: 386 LIH 388
L++
Sbjct: 703 LVY 705
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 9/367 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ Y T+I L K + D A L++EM P + T T +I +C ++
Sbjct: 238 KHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT---VIYGFCRLN 294
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
V F + L+ LC+ + +A+ L+ +K P N FN
Sbjct: 295 RVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL--SKVPGP-NVVHFNT 351
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+ + V+ +M G DV +FS +++ K L L + M
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + + Y +I K +++A +++ M KG + N V YN+LI LCK K+ EA
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471
Query: 298 RQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
F EM +G P I T+++ + + R E+ L M G + T+ LI
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F R + K+ N++ G D +Y LI AL G +E+ + EM K L P
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591
Query: 415 PKTDELL 421
T +L
Sbjct: 592 IITCNIL 598
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 164/402 (40%), Gaps = 74/402 (18%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D E + F WAG Q GY HS Y+ +I LG F L+ +M+ E G +V +
Sbjct: 83 DVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMK--EEG--IVFR 138
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
++L ILI +Y GRA A + + D +G+ +C
Sbjct: 139 ESLFILIMKY-----YGRAGLPGQATRL------LLDMKGV-----------------YC 170
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ F +S+N++L+ ++G+ A V+ +M +G+ + +F ++
Sbjct: 171 CEPSF----RSYNVVLDVL--VVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVN 224
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L M + G + +Y +I AL+K V +A+ L++ M G P+V T+N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-------------------------- 316
++I C+ ++ E + D M+ +G +P TY
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP 344
Query: 317 ---------HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+ F+ R E + + M G P T+ L+ + FG+ ++
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
N++ G P+ ++YT LI G+LEEA EM K
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK 446
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 15/340 (4%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
TL I+I +C A + + + F L+ L V +A L+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 162 ---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
C DV +N+ I+NG C G + A + +M +R + DV ++S II
Sbjct: 185 VENGCQPDVVTYNS-----IVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + + LF +M+ GI+ YN+++ L K D L+K M + + PNV
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
+T+N L+ K KL EA + + EM+ RGISP I TY+ +D + E +L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + C P T+ LIK + ++ + KV+ IS+ G + +Y+ L+ +GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
++ A + + EM +LP+ T +L D + +E+ +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 47/405 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL------------- 106
GY T ++T+I L K A L+D M P +VT ++
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 107 LILIRR------------YCAVHD-------VGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
L L+R+ Y + D + AI+ F + + + L+
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ D L+ ++++ P N +FN++L+ + G +EA ++ EM RGI
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKE-GKLQEANELYKEMITRGIS 330
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
++++++ ++ Y L + + D M R D + ++I + V D + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+++ ++G+ N VTY+ L++ C++ K+ A + F EM+ G+ P + TY LD +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E+ + E ++K Y +I+ + + + + ++ + G P+ +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
YT +I L G L EA+ +M+E P D +YN
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAP--------NDCTYN 547
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 8/277 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ ++ + K K A L EM P+++T TL+ YC + + A N
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM---DGYCMQNRLSEANNMLD 357
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
R K + I F L+ C K V D + +K N +++I++ G+C
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS- 416
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + AE ++ EM G+ DV+++ ++ L K L +F+ +++ ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+I + KG V+DA +L S+ KGV PNV+TY +I LCK L EA +M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 307 RGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMG 340
G +P TY+ + +R G+ L+E M+ G
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
TK FN++L+ +C ++ GI +++ + + +I+C+ + +
Sbjct: 101 TKQFNLVLD-FCK-------------QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++ ++G E D +N +I L V +A+ L+ M E G P+VVTYNS++ +C++
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
A +M +R + + TY +D + R G + L + M G + + TY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L++ + ++ + + ++ P+ ++ L+ GKL+EA++ Y EM
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 409 KQLLPEPKTDELLQD 423
+ + P T L D
Sbjct: 327 RGISPNIITYNTLMD 341
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM + +V FS S ++ + + VL Q++ GI + N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + A S++ + + G P+ T+N+LIK L K+ EA D M++ G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY++ ++ I R+G+ LL M + + TY +I R +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E+ G +Y +L+ L GK + +M ++++P T +L D
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
++ AW L +M+ P++ T L I C + AI F+ R
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L++ L + ++ A ++ ++ N ++N ++ G+C I+G ++A V M
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYC-ILGDPKKAMLVMNNM 621
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
QRG ++V+++ II Y + N LR+ D M+ G + D Y +I K +
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ A L M + G+ PN VTY +LI CK KLD A + M + G P ++TY+
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741
Query: 320 LDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + G L + M + G P TY +I + +++N++ E G
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y++LI AL GK+EEA + E++ L+P+ T
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 842
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 12/360 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K A ++ ++ E P T ++++ +C HD+ A+ F
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMIL---GHCRKHDLDSALQVFN 444
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ LC V +A L M + + +T + II C+
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII--ALCD 502
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G +A R++++M +G +V +++ +IS + L + LF +M R G+ +
Sbjct: 503 M-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 561
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA+I+ L + R +K A ++ M G+ N+VTYN +IK C +A + M
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
LQRG S + TY+ + +G L L+ MR GC+P +Y LI F + +
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ F ++NE+ ++G P+ +YTALI + KL+ A MK P +T +L
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 169/383 (44%), Gaps = 21/383 (5%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+M+NK E + + L+S + V + A F + G +T Y+ +I IL
Sbjct: 515 DMKNKGCEPNVYTYTALISGLC--VSGLLKVAIGLFHRMSRD-GVFPNTVTYNALINILV 571
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R+ A+ +++ M ++VT + I+ YC + D +A+ + +
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEM---IKGYCILGDPKKAMLVMNNMLQRGHSA 628
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ + ++ C N A ++ C D + S+ ++ G+C I
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW-----SYTELICGFCKI-SKME 682
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A ++ EM G+C + V+++ +I Y K L L + MKR G + + YN +I
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L K A L K M E+G+ PNVVTY ++I LCK A + F++M+++G
Sbjct: 743 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 802
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY + + + + G EE L + + G P TY+ +I+ + + + F
Sbjct: 803 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 862
Query: 368 WNEISENGNGPDRSSYTALIHAL 390
+ + G P +Y LI L
Sbjct: 863 LGRMIKAGCQPTLWTYGVLIKGL 885
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 168/380 (44%), Gaps = 17/380 (4%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
++D ++A F K+ G +T Y T+I L + + A+ LI EM P+
Sbjct: 433 KHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T +I + D R F K + + L+S LC ++ A L
Sbjct: 492 TCTGPIIALCDMGCYEDAWRL---FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 548
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSCIIS 216
VFP NT ++N ++N I+ +R + ++ M + G+ ++V+++ +I
Sbjct: 549 HRMSRDGVFP-NTVTYNALIN----ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIK 603
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
Y + K + + + M + G + YN +I A+ ++ M + G P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLL 333
+ +Y LI CK K++ A F+EM+ G+ P TY A +D E++ LL
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
E M++ GC+P TY +LI ++ F ++ + E G P+ +YTA+I L N
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783
Query: 394 GKLEEAHQYYMEMKEKQLLP 413
G A + + +M E+ LP
Sbjct: 784 GSTSLALEMFNKMIEQGCLP 803
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 144/356 (40%), Gaps = 53/356 (14%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF------CNKDVFPF------------------------ 170
+ +++ALC+ NV DAE +M + D F +
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447
Query: 171 ------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI------CYDVVSFSCIISCY 218
NT +++ ++NG C+ G EA + EM GI C + C + CY
Sbjct: 448 KEGCEPNTVTYSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
A RLF MK G E + Y A+I L L+K AI L M GV PN
Sbjct: 507 EDA------WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
VTYN+LI L + R++ A + M + G+ I TY+ + I+ ++ ++ +
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G TY +IK + + ++ + + + G PD SYT LI K
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
+E A + EM + L P T L D Y K SL H +SG V
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALID-GYCKDEKLDTATSLLEHMKRSGCRPNV 735
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+SQ G+ + ++S ++ S+ V+ + +M G++ + +YNAVI+AL K
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA ++MK + E ++P+ TY S+I C+ LD A Q F++M + G P TY
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 460
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + +G E F L+ M G PT T I + + ++++ ++ G
Sbjct: 461 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 520
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YTALI L ++G L+ A + M + P T
Sbjct: 521 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 154/385 (40%), Gaps = 34/385 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K+ K ++A+ L +EM P+ VT L I YC + A +
Sbjct: 668 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL---IDGYCKDEKLDTATSLLE 724
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
KR ++ + L+ L + N AE L + + +FP N ++ +++G C
Sbjct: 725 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP-NVVTYTAMIDGLCKN 783
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS+ A ++ +M ++G +++++S +I + + + LF +++R G+ D
Sbjct: 784 -GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 842
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA----- 300
Y +I A V+ A + + M + G P + TY LIK L L + R A
Sbjct: 843 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 902
Query: 301 -------FDEMLQRGISP------------TIRTYHAFLDIIRTGE---EVFGLLESMRK 338
+ Q +S +++ +A + + T E LL SM
Sbjct: 903 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 962
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P + Y L+ R R V+ +S G + Y LI AL + +E
Sbjct: 963 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 1022
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M + P+ +L D
Sbjct: 1023 ARITFENMLMRTWNPDDVVQAVLID 1047
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
I SC+SK + + + D + + G+ Y+A++ L++ + + M +G
Sbjct: 322 IKSCHSK-EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGE 327
V PN++ YN++I LCK + +A ++ + +SP TY H + +
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+VF M K GC+P TY LI + F + E+ +G P + T I
Sbjct: 441 QVF---NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 497
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL G E+A + +++MK K P T
Sbjct: 498 IALCDMGCYEDAWRLFVDMKNKGCEPNVYT 527
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++S S A + L M G+ D++ YN+++ +L + R V A+ + K M +G
Sbjct: 940 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 999
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-----E 327
++ Y LI LC+ + EAR F+ ML R +P +D ++R G
Sbjct: 1000 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 1059
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
E ++E+ R M P+ Y +L ++ S+ R
Sbjct: 1060 EFLHIMETRRYM---PSFHIYTILAREASKKR 1088
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 169/368 (45%), Gaps = 12/368 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y++ I L K+ + A + +M P +V+ TL I YC + ++
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL---IYGYCRLGNL 390
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A F + I + LL LCR ++ A+ L N+ + P + ++ I
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP-DIVTYTI 449
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C + GS A+ + EM G+ D +++ I K + + L ++M
Sbjct: 450 LVNGSCKM-GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D +YN V+ L K +++A L++ M GV P+ VTY S+I + +L +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 298 RQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
R+ F EML +G++P++ TY H R E F M++ G P TY LI
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL-ERAFIYFSEMQEKGILPNVITYNSLIN 627
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R+ + + E+ E G P++ SYT LI+ G +EA Y +M ++ + P
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Query: 414 EPKTDELL 421
+ T L
Sbjct: 688 DSCTHSAL 695
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 178/402 (44%), Gaps = 20/402 (4%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW- 85
+ V +L VLS R A F WA Q G+ S + ++ IL + +A+
Sbjct: 77 VIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYW 136
Query: 86 -----------ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
++D + GG S V+ + L +LI Y V + ++ F + +
Sbjct: 137 VMERVINANMHRIVDVLIGGCVS-SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRL 195
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--SFNIILNGWCNIIGSSREA 192
+ +++ +L L R K++ ++ F ++N +L+ +C G ++
Sbjct: 196 SPDVKNCNRILRIL-RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKG-GKVQQG 253
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ EM +RG + V+++ +I+ SK + L +M + G++ YN +I+
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
++ +A+SL + M KG +P V TYNS I LCK ++ +A Q +ML + P
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 313 IRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ +Y+ + R G + F L + +R + PT TY L+ R + ++
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
E+ G PD +YT L++ G L A +++ EM + L
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + +N++++G C + G+ EA + +M G+ D V+++ II + + L K
Sbjct: 510 FPPDLIIYNVVVDGLCKL-GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +M G+ Y +IH A KGRL + A M+EKG+ PNV+TYNSLI
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER-AFIYFSEMQEKGILPNVITYNSLIN 627
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQP 343
LCK R++D+A F EM+++GI P +Y ++ + +E L + M G QP
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Query: 344 TNDTYIMLIKKFSR 357
+ T+ L+K+ +
Sbjct: 688 DSCTHSALLKQLGK 701
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N + G C + G +A + +M + DVVS++ +I Y + NL K LFD+
Sbjct: 341 TYNSFIYGLCKL-GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++ + + YN ++ L + ++ A L M +G+AP++VTY L+ CK
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 294 LDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
L A++ FDEML G+ Y + ++ G+ F L E M G P Y +
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ + ++ ++ +G PD +YT++IHA NG+L + + + EM K
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 411 LLPEPKTDELLQDWSYNKQFVER 433
L P T +L K +ER
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLER 602
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ K + ++ M GI+ YN ++ + KG V+ + L+ M+ +G APN VTYN
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMG 340
LI L K + ++A+ EML+ G+ + TY+ + G E L E M G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
PT TY I + + + + +++ N PD SY LI+ G L +A
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ E++ L P T L D
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLD 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 39/188 (20%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ LC+ N+++A L+ + V P +II N G R+ ++ EM
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN--GRLRKGREIFYEMLS 577
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV-- 259
+G+ VV+++ +I ++ L + F +M+ GI + YN++I+ L K R +
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQ 637
Query: 260 ---------------------------------KDAISLMKSMEEKGVAPNVVTYNSLIK 286
++A+SL K M ++GV P+ T+++L+K
Sbjct: 638 AYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Query: 287 PLCKARKL 294
L K KL
Sbjct: 698 QLGKDCKL 705
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 173/408 (42%), Gaps = 78/408 (19%)
Query: 54 WAGKQS--GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
W K S G T Y+T++ L K R A L+ +M+ P+ K T +L+
Sbjct: 235 WVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPN---KHTYNMLVC 291
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
YC + GLL + + +L+ P
Sbjct: 292 GYCRL--------------------------GLLKEATKVIEIMTRNNLL-------P-T 317
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N+++NG+CN G EA R+ EM + + DVV+++ +I S+ R+ +V L
Sbjct: 318 VWTYNMLVNGFCND-GKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++M + G++C+ YN ++ + K + +A + + MEE G++P+ VTYN+LI CKA
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII---------------------------- 323
K+ +A + DEM +G+ T + L +
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496
Query: 324 ----------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
G+ L + M++ P+ TY +I + R+ NE+ E
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
NG PD ++Y +IH L G +E+A Q++ EM E P+ T +L
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNIL 604
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NK 165
ILI YC V A++ F + +L AL + + +Q+A L+ +K
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N ++N+++ G+C + G +EA +V M++ + V +++ +++ + +
Sbjct: 278 GLSP-NKHTYNMLVCGYCRL-GLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ R+ D+M++M + D YN +I ++ R + SL++ M++KGV N VTYN ++
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQ 342
K +CK + EA D+M + G+SP TY+ + + G+ + F +++ M G +
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
T ++ ++ + + S+ G D SY LI F + K + A
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515
Query: 403 YMEMKEKQLLPEPKT 417
+ EMKE+Q++P T
Sbjct: 516 WDEMKERQIMPSTIT 530
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
N + N ++N SS A +V + + G+ + SF+ +I Y + L
Sbjct: 174 NLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDAL 233
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++M G D YN ++ AL K RL+++A L+ M+ KG++PN TYN L+
Sbjct: 234 DWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGY 293
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
C+ L EA + + M + + PT+ TY+ ++ G +E F + + M KM P
Sbjct: 294 CRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDV 353
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI S+WR V+ + E+ + G + +Y ++ + G + EA +
Sbjct: 354 VTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDK 413
Query: 406 MKEKQLLPE 414
M+E L P+
Sbjct: 414 MEENGLSPD 422
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK----------GRLVKDAIS 264
I Y + H ++F++MKR+ + N ++++L + +++KD+I
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIK 206
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII- 323
L GV PN ++N LI C K+ +A ++M + G P +Y+ LD +
Sbjct: 207 L-------GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALL 259
Query: 324 --RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R +E LL M+ G P TY ML+ + R KV ++ N P
Sbjct: 260 KRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVW 319
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y L++ +GK++EA + EM++ +LP+ T L D
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLID 361
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 113/289 (39%), Gaps = 40/289 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ + K A +D+M P VT TL I YC +G+A
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTL---IGAYCKAGKMGKAFRMMD 447
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ +L LC K + +A +L+ +K + + S+ I++ G+
Sbjct: 448 EMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDE 507
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
R A +W EM +R I ++++ +I ++R + + + ++M G+ D Y
Sbjct: 508 KGDR-ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566
Query: 247 NAVIHA-----------------------------------LAKGRLVKDAISLMKSMEE 271
N +IH L + +++ A+ L ++
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVS 626
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
KG +VVTYN++I LCK K + A EM + + P TY +
Sbjct: 627 KGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVII 675
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 44/334 (13%)
Query: 16 SEMRNKIEEC---GIKVSSELVSEVLSWV---RNDWEAAFTFFLWAGKQSGYAHSTREYH 69
SE+ + IEE G+K ++ + +L W+ N EA T L +++G + Y+
Sbjct: 370 SEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT--LDKMEENGLSPDCVTYN 427
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---------------------- 107
T+I K K A+ ++DEM T T+L
Sbjct: 428 TLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKR 487
Query: 108 ----------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
ILI Y RA+N + K + + ++ LC+ + V A
Sbjct: 488 GYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQA 547
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ + P T ++NII++G+C + G+ +A + EM + DV + + ++
Sbjct: 548 IDKLNEMLENGLVPDET-TYNIIIHGFC-LEGNVEKAFQFHNEMIENLFKPDVYTCNILL 605
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ L K L+LF+ + G + D YN +I +L K ++A L+ ME K +
Sbjct: 606 RGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLG 665
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
P+ TY +I L A ++ EA + +M++ GI
Sbjct: 666 PDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 127/339 (37%), Gaps = 70/339 (20%)
Query: 18 MRNKIEECGIKVSSELVSEVLSW--VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
M +++ G+K+ + ++ +L V + A+ A K+ GY Y +I
Sbjct: 445 MMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKR-GYILDEVSYGILILGY 503
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K K D A L DEM+ + PS +T ++ I C V +AI+
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSV---IGGLCQSRKVDQAIDKLNEMLENGLV 560
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNK---DVFPFNTKSFNIILNGWCNIIGSSREA 192
+ ++ C NV+ A F N+ ++F + + NI+L G C G +A
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKA--FQFHNEMIENLFKPDVYTCNILLRGLCRE-GMLEKA 617
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+++ + +G DVV+++ IIS K L +M+ + D+ Y +I A
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677
Query: 253 -----------------------------LAKGRLV------------------------ 259
L KG+ V
Sbjct: 678 LTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELC 737
Query: 260 -----KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
KDA+ L + ++GVA N TY +L++ L K RK
Sbjct: 738 NQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 182/416 (43%), Gaps = 81/416 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G + R + M+ L K +K D A A+ +EM P +T +C++
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT----------FCSL 453
Query: 117 HD----VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV--------------QDAE 158
D VGR +A+ Y++ +L + CR ++ ++
Sbjct: 454 IDGLGKVGRVDDAYKVYEK------------MLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 159 HLMF-------CNKDVFPFNT------------------------------KSFNIILNG 181
H ++ C+ D+ NT +S++I+++G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
G + E ++ M ++G D +++ +I + K ++K +L ++MK G E
Sbjct: 562 LIKA-GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y +VI LAK + +A L + + K + NVV Y+SLI K ++DEA
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIMLIKKFSRW 358
+E++Q+G++P + T+++ LD + EE+ L +SM+++ C P TY +LI +
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R+F F W E+ + G P SYT +I L G + EA + K +P+
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 174/372 (46%), Gaps = 15/372 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY + + T+I K + D+A +L+DEM+ +V + I + V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN---VCIDSFGKV 251
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNT 172
V A F+ + + ++ LC+ + +A EHL K+ T
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL---EKNRRVPCT 308
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++ G+ + G EA + +G V++++CI++C K + + L++F+
Sbjct: 309 YAYNTMIMGYGSA-GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+MK+ + YN +I L + + A L SM++ G+ PNV T N ++ LCK++
Sbjct: 368 EMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
KLDEA F+EM + +P T+ + +D + + G ++ + + E M C+ + Y
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LIK F + + K++ ++ PD + +F G+ E+ + E+K +
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 410 QLLPEPKTDELL 421
+ +P+ ++ +L
Sbjct: 547 RFVPDARSYSIL 558
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 169/409 (41%), Gaps = 47/409 (11%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
N + K E V VL ++ D A +F W +++ H Y++++ ++ + R
Sbjct: 54 NTLSALSFKPQPEFVIGVLRRLK-DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
FD ++ EM GPS+ T + ++ + + + ++FKF
Sbjct: 113 NFDALDQILGEMSVAGFGPSV---NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFS 169
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L+ A + V ++ ++ ++ +M
Sbjct: 170 AYTTLIGA---FSAVNHSDMML--------------------------------TLFQQM 194
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G V F+ +I ++K + L L D+MK ++ D +YN I + K V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A +E G+ P+ VTY S+I LCKA +LDEA + F+ + + P Y+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 320 LDIIRTG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
I+ G +E + LLE R G P+ Y ++ + + KV+ E+ ++
Sbjct: 315 --IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ S+Y LI L GKL+ A + M++ L P +T ++ D
Sbjct: 373 A-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 132/302 (43%), Gaps = 10/302 (3%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ R Y +I L K + + L M+ E G L T+ I+I +C V
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMK--EQGCVLDTR-AYNIVIDGFCKCGKVN 604
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNII 178
+A K F + + ++ L + + +A +++F N ++ +
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA-YMLFEEAKSKRIELNVVIYSSL 663
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++G+ +G EA + E+ Q+G+ ++ +++ ++ KA +++ L F MK +
Sbjct: 664 IDGF-GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ Y +I+ L K R A + M+++G+ P+ ++Y ++I L KA + EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKF 355
FD G P Y+A ++ + G + F L E R+ G N T ++L+
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 356 SR 357
+
Sbjct: 843 HK 844
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+ + Y ++I L K+ + D A+ L +E + ++V +L+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID------GF 667
Query: 117 HDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--- 170
VGR A+ + + + LL AL + + + +A + C + +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA---LVCFQSMKELKCT 724
Query: 171 -NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++ I++NG C + ++ A W EM ++G+ +S++ +IS +KA N+ +
Sbjct: 725 PNQVTYGILINGLCKVRKFNK-AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LFD+ K G D YNA+I L+ G DA SL + +G+ + T L+ L
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Query: 290 KARKLDEA 297
K L++A
Sbjct: 844 KNDCLEQA 851
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 11/276 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
++ K+ G TR Y+ +I K K + A+ L++EM+ P++VT ++ I
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV---ID 630
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDV 167
+ + A F K + + + + L+ + + +A E LM K +
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM--QKGL 688
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N +L+ EA + M + + V++ +I+ K R +K
Sbjct: 689 TP-NLYTWNSLLDALVKA-EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M++ G++ Y +I LAK + +A +L + G P+ YN++I+
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L + +A F+E +RG+ +T LD +
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 166/365 (45%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM +VT L ++
Sbjct: 76 FFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSDVV 133
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R V +AI FY K K + + ++ L +Y+ V + M
Sbjct: 134 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 193
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP +T +++ +++ +C + G A ++ EM + G+ ++ +I+ + K + H
Sbjct: 194 FP-DTVTYSALISAFCKL-GRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ D Y +I L K + +A M+ +G P+ V N++I
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
L KA +LD+A + F EM P++ TY+ + + EV E M++ G P
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
++ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431
Query: 404 MEMKE 408
E+KE
Sbjct: 432 QELKE 436
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ E G TK +LI + +D A++
Sbjct: 197 TVTYSALISAFCKLGRRDSAIQLLNEMK--EIGMQPTTK-IYTMLIALFFKFNDAHGALS 253
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
F + + + L+ L + + +A H FC ++ + + +N N
Sbjct: 254 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHF-FC--EMQREGCRPDTVFMNNMIN 310
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQMKRMGI 239
+G + +A +++ EM VV+++ II SK+R +V F++MK GI
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRA-SEVPSWFERMKESGI 369
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++ D A +
Sbjct: 370 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 429
Query: 300 AFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F E+ + S + R Y + + + G ++ + + M K+GC P Y L+ +
Sbjct: 430 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 489
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + E+G PD +SY +++ L G A + MK+ + P+
Sbjct: 490 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 547
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 153/359 (42%), Gaps = 17/359 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G +T+ Y +IA+ K A +L +EMR P + T L IR
Sbjct: 224 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTEL---IRGLGKA 280
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
+ A + F +R +++ L + + DA L + C V +
Sbjct: 281 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 340
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT I+ + E + M + GI ++S +I + K + K + L
Sbjct: 341 NT-----IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 395
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G Y ++I AL K + A L + ++E + + Y +IK L K
Sbjct: 396 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 455
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A +LD+A FDEM + G +P + Y+A + + RTG +E + M++ GC P ++
Sbjct: 456 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 515
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +++ ++ ++ + + ++ PD SY ++ AL G EEA + EM
Sbjct: 516 YNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 574
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC S ++ A+ + + + +F Q+K + + YN++I L
Sbjct: 115 EMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHE 174
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A Q +EM + G+ PT +
Sbjct: 175 GQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKI 234
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + + G L E MR C+P TY LI+ + + + + E+
Sbjct: 235 YTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 294
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +I+ L G+L++A + + EM+ + +P
Sbjct: 295 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP 335
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 60/352 (17%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR++ + +EL+ + R D A+ FF ++ G T + MI LG
Sbjct: 257 EMRHQYCRPDVFTYTELIRGLGKAGRID--EAYHFFCEMQRE-GCRPDTVFMNNMINFLG 313
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K + D A L EM PS+VT T++ + RA ++R K +
Sbjct: 314 KAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKAL-----FESKSRASEVPSWFERMKES- 367
Query: 137 GIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
GI + L+ C+ ++ A L+ + K F +C++I + +A
Sbjct: 368 GISPSSFTYSILIDGFCKTNRMEKAMMLLE------EMDEKGFPPCPAAYCSLIDALGKA 421
Query: 193 ER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+R ++ E+ + ++ +I KA L + +FD+M ++G D Y
Sbjct: 422 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 481
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKG--------------------------------- 273
NA++ LA+ ++ +A+S M+ M+E G
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541
Query: 274 --VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
V P+VV+YN+++ L A +EA + EM G + TY + L+ I
Sbjct: 542 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 593
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 44/293 (15%)
Query: 3 TLVDILREFSHKRSEMRN---KIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGK 57
T++ L E + SE+ + +++E GI SS S ++ N E A L
Sbjct: 342 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAM-MLLEEMD 400
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y ++I LGK +++D A L E++ G S + + ++I+
Sbjct: 401 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN-CGSS--SARVYAVMIKHLGKAG 457
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ AIN F + A + + L+S L R
Sbjct: 458 RLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR--------------------------- 490
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
G EA M + G D+ S++ I++ +K H+ + + MK+
Sbjct: 491 --------TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 542
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ D YN V+ AL+ + ++A LMK M G +++TY+S+++ + K
Sbjct: 543 TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVFGLL 333
TY +LI L + E + EM++ I + T D++R + +
Sbjct: 92 TYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNAKMVRQAITIF 149
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFL 392
++ CQP Y +I Q+ V +++NE+S G+ PD +Y+ALI A
Sbjct: 150 YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCK 209
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+ + A Q EMKE + P K +L
Sbjct: 210 LGRRDSAIQLLNEMKEIGMQPTTKIYTML 238
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 26/387 (6%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL R D A F +AG+ + + + ++ M+ + + +FD A L+D M
Sbjct: 193 VVLGVLGRARQDSIAEEVFLRFAGEGA----TVQVFNAMMGVYARSGRFDDARQLLDTMH 248
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P LV+ TL I R G A++ + ++ + + L+SA +
Sbjct: 249 DRGIDPDLVSFNTL-INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 153 NVQDA----EHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
N++DA E ++ C D++ +N + ++G C G + EAER++ E+ ++G
Sbjct: 308 NLEDAVTVFEEMIASECRPDLWTYNAM---VSVHGRC---GKAEEAERLFGELVEKGFMP 361
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D V+++ ++ ++K N+ KV +++ + G + + YN +IH K + A+ L
Sbjct: 362 DAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLY 421
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M G P+ VTY +I L K K+ EA + ++M G+ PT+ + A + G
Sbjct: 422 DEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKG 481
Query: 327 ------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
E+ F + M G +P Y++++ F+R + + +++ + + PD
Sbjct: 482 GRRADAEKTF---DCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDD 538
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ AL K EE + +M+
Sbjct: 539 DMYQVLLVALAKEDKCEEIEEIIQDME 565
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 184 NIIGSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
++G +R+ AE V++ + G V F+ ++ Y+++ +L D M GI+
Sbjct: 196 GVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDTMHDRGID 253
Query: 241 CDRKVYNAVIHALAKGRLVKD--AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D +N +I+A +K + A+ L+ + + G+ P+V+TYN+LI ++ L++A
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAV 313
Query: 299 QAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F+EM+ P + TY+A + + R G EE L + + G P TY L+ F
Sbjct: 314 TVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAF 373
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
++ V E+ + G + +Y +IH G+L+ A Y EM+ P+
Sbjct: 374 AKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDA 433
Query: 416 KTDELLQD 423
T ++ D
Sbjct: 434 VTYTVMID 441
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 125/317 (39%), Gaps = 38/317 (11%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K T+L+++ + DV + + K + + ++ + S LC + +D E +
Sbjct: 848 ISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELM 907
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ EM G D+ F+ +++ Y+
Sbjct: 908 I-----------------------------------AEMEGAGFKPDLSIFNSLLNMYTA 932
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A N + +++ + G+E D YN +I + ++ +L+ M ++G+ P + +
Sbjct: 933 AGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
Y SL+ KA ++A Q F+EM + YH + I R + LL M+
Sbjct: 993 YKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G +PT T +L+ + Q V N + + Y+ + A NG +
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYD 1112
Query: 398 EAHQYYMEMKEKQLLPE 414
+ +EMK + P+
Sbjct: 1113 LGIKKLLEMKRDGVEPD 1129
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L F+ + R R V AV+ + GR +D+I+ + G V +N+++
Sbjct: 172 RALDAFEWLARSTAPASRAV--AVVLGVL-GRARQDSIAEEVFLRFAGEGATVQVFNAMM 228
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG----LLESMRKMG 340
++ + D+ARQ D M RGI P + +++ ++ ++G G LL +R+ G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY LI S+ + V+ E+ + PD +Y A++ GK EEA
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348
Query: 401 QYYMEMKEKQLLPEPKT 417
+ + E+ EK +P+ T
Sbjct: 349 RLFGELVEKGFMPDAVT 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII-------SCYSKARNLHKV 227
+ I++ +C + G A + + Q GI +++S II + +A L K
Sbjct: 713 YESIISTYCKL-GFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKG 771
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
LR + GI DR+++NA+IHA A+ L + A ++ +M + G P V + N +++
Sbjct: 772 LR-----QASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRA 824
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPT 344
L +LDE E+ + T LD +VF +++ M+ G P
Sbjct: 825 LIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPN 884
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
Y + +F +V + E+ G PD S + +L++ G + Q Y
Sbjct: 885 MHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQ 944
Query: 405 EMKEKQLLPEPKT 417
+ E L P+ T
Sbjct: 945 SILEAGLEPDEDT 957
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 17/240 (7%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ ++KA ++ +V+++++ MK G + +Y ++ L +D ++ ME G
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAG 915
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI----IRTGEEV 329
P++ +NSL+ A D Q + +L+ G+ P TY+ + + +R EE
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRP-EEG 974
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F LL M K G P +Y L+ ++ +++ E+ +RS Y ++
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNT 449
G +A MKE + P T +L SY A QP +N
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMT-SYG-----------TAGQPHEAENV 1082
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 124/322 (38%), Gaps = 41/322 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +GY + Y +M ++L +F +I EM G P L +LL + Y A
Sbjct: 877 KAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNM---YTAA 933
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ R + + G+E + ++N
Sbjct: 934 GNFDRTTQVYQSI----LEAGLEP------------------------------DEDTYN 959
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ +C + E + EM +RG+ + S+ +++ +KA + +LF++M+
Sbjct: 960 TLIVMYCRSL-RPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRS 1018
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ +R +Y+ ++ A +L+ M+E G+ P + T + L+ A + E
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHE 1078
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + + + + Y D ++ G+ G+ L M++ G +P + + I+
Sbjct: 1079 AENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIR 1138
Query: 354 KFSRWRQFGNVFKVWNEISENG 375
S Q + + + + G
Sbjct: 1139 AASLCEQTADAILLLKSLQDCG 1160
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/239 (17%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I+C +A + ++F M+ +GIE + +Y ++I K + A LM + G
Sbjct: 681 LITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSG 740
Query: 274 VAPNVVT-----------------------------------YNSLIKPLCKARKLDEAR 298
+ N+++ +N+LI ++ ++AR
Sbjct: 741 IPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKAR 800
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
FD M++ G PT+ + + + +I G +E++ ++ ++ M + + T ++++ F
Sbjct: 801 AVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAF 860
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ V K++N + G P+ Y ++ L + + + EM+ P+
Sbjct: 861 AKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPD 919
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K G C+ +Y +I L + L +A + M+ G+ + Y S+I CK
Sbjct: 668 LKYPGQNCN--LYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGF 725
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ A D+ LQ GI I + + I+ ++ L++ +R+ +
Sbjct: 726 PETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQ-ASGIDRRIWN 784
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI ++ + V++ + + G P S ++ AL ++G+L+E + E+++
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQD 843
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 158/326 (48%), Gaps = 14/326 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +T T + C VG A+ + + + +++ LC+ +++A
Sbjct: 284 PDQITYNTF---VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCI 214
+ ++ ++ P + +FN ++ C G+ EA + +++ +G+ DV +F+ +
Sbjct: 341 KGILNQMVDRGCLP-DITTFNTLIAALCT--GNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKG 273
I+ K + H LRLF++MK G D YN +I L G+L K A+ L+K ME G
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK-ALDLLKDMESTG 456
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ +TYN++I LCK +++EA + FD+M +GIS T++ +D + + ++ F
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
GL+ M G QP N TY ++ + + + ++ NG D +Y LI+ L
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPK 416
G+ + A + M+ K + P PK
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPK 602
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 43/331 (12%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I F L++ALC +++A L K V P + +FNI++N C + G A R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP-DVYTFNILINALCKV-GDPHLALRL 413
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G D V+++ +I L K L L M+ G YN +I L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A + M+ +G++ N +T+N+LI LCK +K+D+A ++M+ G+ P T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533
Query: 316 YHAFL--------------------------DIIRTGEEVFGL------------LESMR 337
Y++ L D++ G + GL L MR
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKL 396
G +PT Y +++ R + ++ E++E G PD +Y + L G +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+EA + +EM +K +PE + +L + N
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ ALCR V+ A ++ ++ V P T +F ++ G+ GS A RV
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET-TFTTLMQGFVEE-GSIEAALRVKAR 241
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G V+ + +I+ Y K + L Q G E D+ YN ++ L +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ +M M ++G P+V TYN ++ LCK +L+EA+ ++M+ RG P I T++
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + TG EE L + G P T+ +LI + +++ E+ +G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y LI L GKL +A +M+
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 167/399 (41%), Gaps = 18/399 (4%)
Query: 36 EVLSWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR- 92
++L+ +R D +AA A + +A Y +I LG V D L+ EMR
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 93 -GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALC 149
G + +V + Y A++ + F + + + LL+ L
Sbjct: 103 EGHQVKLGVVHS-----FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 150 RYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
++ E + + + P + +FN ++ C R A + EMS RG+ D
Sbjct: 158 EGSKMKLLESVYSEMGARGIKP-DVVTFNTLMKALCRA-HQVRTAVLMLEEMSSRGVAPD 215
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+F+ ++ + + ++ LR+ +M MG + N +I+ K V+DA+ ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG 326
G P+ +TYN+ + LC+ + A + D M+Q G P + TY+ ++ + + G
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE G+L M GC P T+ LI + + +++ G PD ++
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI+AL G A + + EMK P+ T L D
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 102/270 (37%), Gaps = 43/270 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG Y+T+I L + K A L+ +M S +T T+ I C
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI---IDGLCKK 474
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A F + F L+ LC+ K + DA L+ ++ + P N +
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQP-NNIT 533
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N IL +C G ++A + M+ G DVV++ +I+ KA L++ M
Sbjct: 534 YNSILTHYCKQ-GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE----------------------- 271
+ G+ K YN V+ +L + ++DA+SL + M E
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652
Query: 272 -------------KGVAPNVVTYNSLIKPL 288
KG P ++ L + L
Sbjct: 653 IKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 161/325 (49%), Gaps = 14/325 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P+ V+ T++ R CA G A+ + + + + L+ LC + A
Sbjct: 121 PNAVSYTTVM---RGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAA 177
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L+ C V P N ++ +L G+C G ++ +V+ +MS+RGI DV+ F+ +I
Sbjct: 178 LELLDEMCGSGVQP-NVVVYSCLLRGYCRS-GRWQDVGKVFEDMSRRGIKPDVIMFTGLI 235
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K K ++ D M + G+E + YN +I++L K V++A++L K M++KGVA
Sbjct: 236 DDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVA 295
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTY----HAFLDIIRTGEEV 329
P+VVTYN+LI L ++DEA +EM+Q + P + T+ H I R + V
Sbjct: 296 PDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAV 355
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ E M + GC TY LI F R + + +E++ +G PD +Y+ LI+
Sbjct: 356 -KVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING 414
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ A ++ M+++ + E
Sbjct: 415 FSKMWEVDRAEKFLCTMRQRGIKAE 439
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 181/404 (44%), Gaps = 23/404 (5%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
VS V L R EA L + + SG Y T+I L + D A L+
Sbjct: 124 VSYTTVMRGLCASRRTGEA--VALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELL 181
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAV---HDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
DEM G P++V LL R YC DVG+ F R + F GL+
Sbjct: 182 DEMCGSGVQPNVVVYSCLL---RGYCRSGRWQDVGK---VFEDMSRRGIKPDVIMFTGLI 235
Query: 146 SALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LC+ A + M + + P N ++N+++N C GS REA + EM +G
Sbjct: 236 DDLCKEGKTGKAAKVKDMMVQRGLEP-NVVTYNVLINSLCK-EGSVREALTLRKEMDDKG 293
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR--MGIECDRKVYNAVIHALAK-GRLVK 260
+ DVV+++ +I+ S + + + ++M + +E D +N+VIH L K GR+ +
Sbjct: 294 VAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQ 353
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A+ + + M E+G N+VTYN LI + K+ A DE+ G+ P TY +
Sbjct: 354 -AVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILI 412
Query: 321 DIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ EV L +MR+ G + YI L+ + ++NE+ +N G
Sbjct: 413 NGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CG 471
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
D +Y+ +IH +G ++ Q +M ++ L P+ T +L
Sbjct: 472 LDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSML 515
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 207 DVVSFSCIIS--CYSKARNLHKVLRLFDQMKRMGIECDRK---VYNAVIHALAKGRLVKD 261
D VS++ +++ C +L + L M R R Y V+ L R +
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A++L++SM+ GV +VVTY +LI+ LC A +LD A + DEM
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC---------------- 185
Query: 322 IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G QP Y L++ + R ++ +V KV+ ++S G PD
Sbjct: 186 ----------------GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVI 229
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAH 441
+T LI L GK +A + M ++ L P T +L + S K+ R+ +L+
Sbjct: 230 MFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLIN-SLCKEGSVREALTLRKE 288
Query: 442 QPQSGQNTRVIS 453
G V++
Sbjct: 289 MDDKGVAPDVVT 300
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 43/289 (14%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET--GPSLVTKQTLLILIRRYCAVH 117
G A Y+T+IA L V + D A + ++EM G+T P +VT ++ I C +
Sbjct: 293 GVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSV---IHGLCKIG 349
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ +A+ + + L+ R V+ A +LM + P ++ ++
Sbjct: 350 RMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEP-DSFTY 408
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGI------------------------------- 204
+I++NG+ + R AE+ M QRGI
Sbjct: 409 SILINGFSKMWEVDR-AEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD 467
Query: 205 --C-YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
C D +++S +I K+ ++ V +L M G+ D Y+ +I+ AK +++
Sbjct: 468 KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEE 527
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
A ++K M G P+V ++SLIK + D+ + EM + ++
Sbjct: 528 AERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVA 576
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ C+ +++ + L+ ++ + P + ++++++N + + G EAERV +
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAP-DAVTYSMLINMYAKL-GDLEEAERVLKQ 534
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
M+ G DV F +I YS KVL+L +M+ + D K+ + +I
Sbjct: 535 MTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 168/411 (40%), Gaps = 56/411 (13%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S+ IE +KV LV +VL + + A FF WAGK+ + H + Y +I L
Sbjct: 76 SDAEKAIEVLKLKVDHRLVHQVLD-IDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRCL 134
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ D W I +M IR C+V
Sbjct: 135 EESGLVDEMWRTIQDM------------------IRSPCSV------------------- 157
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSS 189
G ++ +L L + K V A + + CN +NT ++ G
Sbjct: 158 -GPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEG------HH 210
Query: 190 REAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ ++ E+ G C D +++S +IS + K RLFD+MK G+ K+Y
Sbjct: 211 EKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTT 270
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++ K V+ A+ L++ M+ KG AP V TY LIK L K ++D+A F ML+ G
Sbjct: 271 ILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDG 330
Query: 309 ISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P + + ++I+ R G E+ L M + C P TY +IK + +
Sbjct: 331 CKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEA 390
Query: 366 KVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+W E + NG P +Y LI ++E+A EM EK P P
Sbjct: 391 ALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 441
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 29/365 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ GK+ ++D A+ L DEM+ P+ T+L + Y ++ V A+
Sbjct: 230 TITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAM---YFKLNKVEAALR 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
K A + + L+ L + V DA L F C DV ++
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV---------VL 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N NI+G + +A +++ +M +VV+++ +I SKA L F++
Sbjct: 338 INNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WFEK 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK GI Y +I K V+ A+ L++ M+EKG P Y SLI L +A++
Sbjct: 397 MKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHA----FLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ A + F E+ + + R Y F + R + V L K+GC P TY
Sbjct: 457 YEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAV-DLFCEXEKLGCSPDVYTYN 515
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ R + + ENG PD S+ +++ L G + A + + +MKE
Sbjct: 516 ALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
Query: 410 QLLPE 414
+++P+
Sbjct: 576 EIMPD 580
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 169/386 (43%), Gaps = 15/386 (3%)
Query: 20 NKIEECGIKVSSELVSEVLS--WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
++++E G+ + ++ + +L+ + N EAA + K G A + Y +I LGK
Sbjct: 254 DEMKENGLHPTEKIYTTILAMYFKLNKVEAALRL-VEEMKGKGCAPTVFTYTELIKGLGK 312
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
V + D A++L M P +V L+ ++ R + D A+ F + A
Sbjct: 313 VGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLED---ALKLFGKMDSLQCAPN 369
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN--IILNGWCNIIGSSREAERV 195
+ + ++ A+ K L F SF I+++G+C +A +
Sbjct: 370 VVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT-NRVEKALLL 428
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM ++G ++ +I +A+ LF ++K +VY +I
Sbjct: 429 LEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGN 488
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ DA+ L E+ G +P+V TYN+L+ + +A +DEA M + G +P I++
Sbjct: 489 CGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKS 548
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
++ L+ + +TG + + M++ P +Y ++ SR F K+ E+
Sbjct: 549 HNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMK 608
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEE 398
G D +Y++++ A+ GK++E
Sbjct: 609 LKGFEYDSITYSSILEAV---GKVDE 631
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 26/370 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I L + K + A+ L EM+ P + T ILI +C V +
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT---ILIDSFCKVGLI 506
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A + F + + + + LL A + K V A + + P NT +++
Sbjct: 507 EQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP-NTITYSA 565
Query: 178 ILNGWCNIIGSSREAERVWMEM----------------SQRGICYDVVSFSCIISCYSKA 221
+++G C G S++A V+ +M I +VV++ +I KA
Sbjct: 566 LVDGLCKA-GESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKA 624
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ L D M G E + +Y+A+I K + +A + M + G P V TY
Sbjct: 625 HKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTY 684
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRK 338
SLI + K R+LD A + +ML+ +P + TY A +D + R GE + LL M K
Sbjct: 685 TSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEK 744
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC P TY LI + + +++ ++ G P+ +Y LI+ G L+E
Sbjct: 745 RGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDE 804
Query: 399 AHQYYMEMKE 408
AH EMK+
Sbjct: 805 AHSLLSEMKQ 814
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 174/412 (42%), Gaps = 62/412 (15%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI------RRY 113
G + S Y ++ K ++ A + M P+ +T L+ + ++
Sbjct: 520 GCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579
Query: 114 CAVHD--VGRAINA-----FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
C V+ +G + N F A + + L+ LC+ V DA+ L+ D
Sbjct: 580 CEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELL----D 635
Query: 167 VFPFNTKS-----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
V N ++ +++G+C + G A+ V+ MS+ G V +++ +I K
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKV-GKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKD 694
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R L +++ QM + Y A+I L + + A+ L+ ME++G PNVVTY
Sbjct: 695 RRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTY 754
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-------------------- 321
SLI L K+ K+D + Q F +M+ +G +P TY ++
Sbjct: 755 TSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ 814
Query: 322 ------------IIRTGEEVF----GLLESMRKMGCQPTNDTYIMLIKKFS---RWRQFG 362
+++ + F GLLE + G Y +LI FS R +
Sbjct: 815 TYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKAL 874
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ K E+S + N + +YT+LI AL L +LE+A + Y E+ K ++PE
Sbjct: 875 ELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 166/384 (43%), Gaps = 34/384 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++++ R + A+ L++ M G P V I I C+ ++
Sbjct: 347 FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYN---IFIGSICSGEELPSPDLLAL 403
Query: 128 AYKRFK---------FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
A K ++ V +F L + ++ LM + F +T +++ +
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMM--RKGFVPDTSTYSKV 461
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ C + +A ++ EM G+ DV +++ +I + K + + FD+M+ +G
Sbjct: 462 ITFLCEAM-KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
Y A++HA K + V A + M + G APN +TY++L+ LCKA + +A
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Query: 299 QAFDEML----------------QRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKM 339
+ + +M+ I+P + TY A +D + +V LL+ M
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
GC+P + Y LI F + + N +V+ +S+ G P +YT+LI A+F + +L+ A
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
+ +M E P T + D
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMID 724
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 174/429 (40%), Gaps = 65/429 (15%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-----------------ILIRRY 113
MI+ L + FD A + + MR P++VT +TLL +++
Sbjct: 280 MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG 339
Query: 114 C---------AVHDVGRAINAFYAYKRFKFAVGIEDFQG------LLSALCRYKNVQDAE 158
C VH A + YAYK G G + ++C + + +
Sbjct: 340 CNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPD 399
Query: 159 HLMFCNKD----------VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
L K + NT +F L G +G +A ++ M ++G D
Sbjct: 400 LLALAEKVYEEMLASSCVLNKVNTANFARCLCG----MGKFDKAFQIIKLMMRKGFVPDT 455
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
++S +I+ +A + K LF +MK +G+ D Y +I + K L++ A S
Sbjct: 456 STYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE 515
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE 327
ME G +P+VVTY +L+ K +++ +A F M+ G +P TY A +D + + GE
Sbjct: 516 MESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGE 575
Query: 328 -----EVFG-LLESMRKMGCQ------------PTNDTYIMLIKKFSRWRQFGNVFKVWN 369
EV+ ++ + +G P TY LI + + + ++ +
Sbjct: 576 SQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 635
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
+S NG P+ Y ALI GKL+ A + + M + LP T L D + +
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695
Query: 430 FVERQIASL 438
++ I L
Sbjct: 696 RLDLAIKVL 704
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 31/338 (9%)
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC---NKDV 167
R C + +A R F + +++ LC V+ A L+F + V
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKA-FLLFQEMKSVGV 486
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + ++ I+++ +C + G +A + EM G VV+++ ++ Y K + + +
Sbjct: 487 IP-DVYTYTILIDSFCKV-GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM----------------EE 271
+F +M G + Y+A++ L K + A + M
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRT 325
+APNVVTY +LI LCKA K+ +A++ D M G P Y A +D +
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+EVF M K G PT TY LI + R+ KV +++ E+ P+ +YTA
Sbjct: 665 AQEVF---FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTA 721
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+I L G+ ++A + M+++ P T L D
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLID 759
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 176/481 (36%), Gaps = 100/481 (20%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ +V VL VR E FFLWA +Q GY+H+ Y+ + +L + T L+
Sbjct: 102 LNDAVVVAVLRSVRTP-ELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLL 160
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGRAINAFY-------------- 127
E+ GE V + L +++R+ C A+ ++GR + Y
Sbjct: 161 REI--GEDDRE-VLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVL 217
Query: 128 -------------------AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
+ KF VG ALC+ DA L+ ++ F
Sbjct: 218 ATAGQMDMGFRVQKEMSELGFCTDKFTVGC-----FAQALCKEGRWSDA--LVMIEREDF 270
Query: 169 PFNTKSFNIILNGWCNIIGSS--REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+T +++G ++ +S EA M +VV++ +++ + K + L
Sbjct: 271 KLDTVLCTQMISG---LMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGW 327
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
R+ M G + ++N+++H+ R A L+ M G P V YN I
Sbjct: 328 CKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIG 387
Query: 287 PLCKARKL-----------------------------------------DEARQAFDEML 305
+C +L D+A Q M+
Sbjct: 388 SICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMM 447
Query: 306 QRGISPTIRTYH---AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++G P TY FL E+ F L + M+ +G P TY +LI F +
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
++E+ G P +YTAL+HA ++ +A + M + P T L
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567
Query: 423 D 423
D
Sbjct: 568 D 568
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 29/279 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY + Y ++I + K R+ D A ++ +M P++VT + I C +
Sbjct: 674 KCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM---IDGLCRIG 730
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ +A+ ++ + + L+ L + V + L + P N ++
Sbjct: 731 ECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAP-NYVTY 789
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQ-------RGICYDVVSFSCIISCYSKARNLHKVL 228
+++N C G EA + EM Q +G C V FS + L
Sbjct: 790 RVLINHCCAA-GLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFS---------KKFIASL 839
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV---TYNSLI 285
L ++++ G+ VY +I + +K ++ A+ L K M E + N+ TY SLI
Sbjct: 840 GLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLI 899
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+ LC A +L++A + + E+ ++G+ P + AF+ +I+
Sbjct: 900 QALCLASQLEKAFELYSEITRKGVVPEL---SAFICLIK 935
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 175/391 (44%), Gaps = 46/391 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+T++ + A L+ M+ P+ T TL + Y + +
Sbjct: 240 GLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTL---VSAYARLGWI 296
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-------EHLMFCNKDVFPFNT 172
+A N A F F + + L + LC+ V +A EHL + DV +NT
Sbjct: 297 KQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNT 356
Query: 173 ------------------------------KSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ NI++ G C G EA M++
Sbjct: 357 LVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCRE-GQLEEALGRLKMMTEE 415
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ DV++++ +I Y KARN+ K L D+M R G++ D N +++ L K + ++A
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-- 320
L++S ++G P+ V+Y +++ K K + A +DEM +R ++P+I TY+ +
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKG 535
Query: 321 --DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
I + E + L E M+K G P + TY ++I + + F+ N++ EN P
Sbjct: 536 LCTIGKLTEAIDKLNELMKK-GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
D + L++ L L+GKLE+A + + EK
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-C 163
T +L+ +C+ + A++ + F + + + LL A CR + +A L+
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
K+ ++N +++ + +G ++A V M+ G D+ +++ + + +A
Sbjct: 272 KKEGIAPTRATYNTLVSAYAR-LGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330
Query: 224 LHKVLRLFDQMKRMGI-ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + +L D+M+ + I D YN ++ A K + DA++L++ M +KGV ++VT+N
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKM 339
++K LC+ +L+EA M + G++P + TY+ +D R + F L++ M +
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G + T L+ + +++ ++ + G PD SY ++ A F K E A
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510
Query: 400 HQYYMEMKEKQLLP 413
+ EM +++L P
Sbjct: 511 LYLWDEMSKRKLTP 524
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +FN++++ C+ G+ +A M G+ DVV+++ ++ + + L + L
Sbjct: 209 NHYTFNLLVHTHCSK-GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+MK+ GI R YN ++ A A+ +K A +++++M G P++ TYN L LC+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 291 ARKLDEARQAFDEMLQRGI-SPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTND 346
A K+DEA + DEM I SP + TY+ +D + + LLE MR G + +
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
T+ +++K R Q ++E G PD +Y LI A
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDA 430
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 15/362 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSLVTKQTLLILIRRYCAV 116
+ G A Y+T+I K R A+ L+DEM R G + TL L+ C
Sbjct: 414 EEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTF----TLNTLLYNLCKE 469
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
A + + F + +++A + + A +L + + P + +
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP-SIYT 528
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C I G EA E+ ++G+ D +++ II Y K +L K + ++M
Sbjct: 529 YNTLIKGLCTI-GKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 587
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ D N +++ L ++ AI L +S EKG +V+TYN+LI+ LCK +
Sbjct: 588 LENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDV 647
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
D A F +M RG+ P TY+ L + EE +L + + G +Y L
Sbjct: 648 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP-L 706
Query: 352 IKKFSRWRQFGNVFKVWNEISENGN--GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
IK + + G +V ++ GN G D+ SY + L + G+L+EA EM +K
Sbjct: 707 IKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQK 766
Query: 410 QL 411
+
Sbjct: 767 GM 768
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +F + + + + +N ++H + DA+S + +M+ G++P+VVTYN+L+K
Sbjct: 195 LDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKA 254
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPT 344
C+ L EAR M + GI+PT TY+ + R G ++ ++E+M G +P
Sbjct: 255 HCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPD 314
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISE-NGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +L + + FK+ +E+ + PD +Y L+ A F + +A
Sbjct: 315 LWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLL 374
Query: 404 MEMKEK 409
EM++K
Sbjct: 375 EEMRDK 380
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 7/212 (3%)
Query: 225 HKVLRLFDQMKRMG-IECDRKVYNAVIHALAKGRLVKDAISL--MKSMEEKGVAPNVVTY 281
H +L +R G + + NAV+ ALA+ SL +S+ + PN T+
Sbjct: 154 HLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTF 213
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRK 338
N L+ C L +A M G+SP + TY+ L R G E LL M+K
Sbjct: 214 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKK 273
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G PT TY L+ ++R V ++ G PD +Y L L GK++E
Sbjct: 274 EGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 333
Query: 399 AHQYYMEMKEKQLL-PEPKTDELLQDWSYNKQ 429
A + EM+ ++ P+ T L D + Q
Sbjct: 334 AFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQ 365
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 117/315 (37%), Gaps = 78/315 (24%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + Q G+ Y T++A K K + A L DEM + PS+ T TL I+
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTL---IK 534
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK---DVF 168
C + + AI+ + + ++ A C+ +++ A F NK + F
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKA--FQFHNKMLENYF 592
Query: 169 PFNTKSFNIILNGWC----------------------NII------------GSSREAER 194
+ + N ++NG C ++I G A
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG---------------- 238
+ +M RG+ D +++ ++S S+A + + ++ G
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAE 712
Query: 239 -----------IEC---------DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+C D++ YN + L G +K+A +++ M +KG++ +
Sbjct: 713 EVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDS 772
Query: 279 VTYNSLIKPLCKARK 293
TY +L++ L K +K
Sbjct: 773 STYITLMEGLIKRQK 787
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 163/384 (42%), Gaps = 51/384 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---------- 107
SG+ Y + L K + D A+ L+ EM G P+LVT TL+
Sbjct: 108 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167
Query: 108 ----------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
I++ C + +A+ + + + L+
Sbjct: 168 KAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227
Query: 146 SALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LCR V +A H+ C D + + ++NG+C SSR E +
Sbjct: 228 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS-----LVNGYCK---SSRTKEAQKVVD 279
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
RG Y + ++ ++ Y K L ++ +F+ M G + K YN V+ L K V
Sbjct: 280 GIRGTPY-IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+A ++SM G P+VV+YN +I L KA K EARQ D+M+Q GI P TY+
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398
Query: 320 LDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ E + G+L++M K G P N TY LI S+ + G+ +++ +E+ NG
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458
Query: 377 GPDR-SSYTALIHALFLNGKLEEA 399
++Y +I L G L++A
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQA 482
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 172/402 (42%), Gaps = 45/402 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K K D A ++ EM P VT +++ C RA +
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIM---DGLCKAGKFERAHSLLA 69
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ L+S LC+ +NV A+ L+ F + P + +++I+ +G C
Sbjct: 70 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP-DVVTYSILADGLCKR 128
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA + EMS G ++V+++ +I KA K L + + G D
Sbjct: 129 -GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 246 YNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y ++ L K GRL K A+ +++ M ++G P+V+TY +L++ LC+ ++DEA F EM
Sbjct: 188 YTIIVDGLCKEGRLDK-ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246
Query: 305 LQR------------------------------GI--SPTIRTYHAFLD-IIRTG--EEV 329
+ + GI +P I Y+A +D + G +E+
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ E M GC P TY +++ + + F + G PD SY +I
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF 430
LF K +EA Q +M + + P+ T + L+ + ++F
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DVF ++NI+++G C + + +E + EM RG+ D V+F+ I+ KA
Sbjct: 9 DVF-----TYNILIDGLCKASKTDKASEMLH-EMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L M YN +I L K + V A +L+ G P+VVTY+ L
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
LCK ++DEA + EM G +P + TY+ +D + E+ + LLE++ G
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY +++ + + K+ + + G P +YTAL+ L G+++EAH
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242
Query: 403 YMEMKEKQ 410
+ EM K
Sbjct: 243 FKEMVSKD 250
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 7/274 (2%)
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
K A + + L+ LC+ A ++ ++ V P +T +FN I++G C G
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP-DTVTFNSIMDGLCKA-GKFE 62
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A + M++R +++ +IS K +N+ + L D+ G D Y+ +
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K + +A L+K M G PN+VTYN+LI LCKA K ++A + + ++ G
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY +D + + G ++ ++E M K GC P+ TY L++ R + +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ E+ D +Y +L++ + + +EA +
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M++R + DV +++ +I KA K + +M G+ D +N+++ L K
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A SL+ M E+ P+ TYN+LI LCK + +D A+ DE + G P + TY
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
D + + G +E F L++ M GC P TY LI + + +++ + +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PD +YT ++ L G+L++A + M ++ P
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 157/362 (43%), Gaps = 50/362 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + +G Y+ +I L K K A ++D+M P VT TL+
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA--- 400
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
F +RF AVGI KN+ A V P N
Sbjct: 401 -------------QFCKEERFDDAVGI------------LKNMIKA--------GVDPDN 427
Query: 172 TKSFNIILNGW--CNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVL 228
++N +++G N +G + E + EM + G + +++ II K L + L
Sbjct: 428 V-TYNTLISGLSQTNRLGDAYE---LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L D M G+E + YN I L K + +A SL+ M+ + V+Y ++I L
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGL 540
Query: 289 CKARKLDEARQAFDEMLQ-RGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPT 344
CKA +LD A + EM+ +G+ T T++ +D + +E LLE M + GC P+
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY M+I + + +++++E++ G SYT LI+ L G+ +EA Q
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660
Query: 405 EM 406
EM
Sbjct: 661 EM 662
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q+G Y+T++A K +FD A ++ M P VT TL I +
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL---ISGLSQTN 441
Query: 118 DVGRAINAFYAYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
+G A + R V + ++ LC+ ++ A LM NT ++
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI ++ C G EA + EM D VS++ +I KA L + +L +M
Sbjct: 502 NIFIDRLCKE-GRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMV 557
Query: 236 RM-GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ +N +I A K + + +A++L++ M ++G +P+V+TYN +I LCK K+
Sbjct: 558 AVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKV 617
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
D+A + FDEM RGI + +Y + + G+E +LE M C+
Sbjct: 618 DKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 668
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V T ILI C + + AI K F + +L LC+ + +A L
Sbjct: 210 VNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDL 269
Query: 161 MFC--NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ N + P N +FNI+++G+C +G +EA +V M+Q + DV +++ +I
Sbjct: 270 LLDMKNNGLLP-NRNTFNILVSGYCK-LGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K + + RL D+M+ + + D YN +I+ L+ ME KGV PN
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNA 387
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLES 335
VTYN ++K K K+D A +M + G SP T++ ++ + G E F +++
Sbjct: 388 VTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDE 447
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G + + T ++ R+ + +K+ + S+ G D SY LI F +GK
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507
Query: 396 LEEAHQYYMEMKEKQLLP 413
EA + + EMKEK+++P
Sbjct: 508 SVEAMKLWDEMKEKEIIP 525
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 21/385 (5%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
L W++ EAA L A Q+ Y+ +I L K K D A+ L DEM +
Sbjct: 295 LGWLK---EAAQVIDLMA--QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL 349
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-----K 152
P +VT TL+ D ++ F + + G++ + + ++ K
Sbjct: 350 PDVVTYNTLI------NGCFDCSSSLKGFELIDKME-GKGVKPNAVTYNVVVKWYVKEGK 402
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
L + F + +FN ++NG+C G EA R+ EMS++G+ + V+ +
Sbjct: 403 MDNAGNELRKMEESGFSPDCVTFNTLINGYCKA-GRLSEAFRMMDEMSRKGLKMNSVTLN 461
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
I+ R L +L + G D Y +I K +A+ L M+EK
Sbjct: 462 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTG--EEV 329
+ P+++TYN++I LC + K D++ +E+L+ G+ P TY+ L R G E+
Sbjct: 522 EIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F M K +P T +L++ K++N G D +Y +I
Sbjct: 582 FQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG 641
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPE 414
L + EEA EM+EK+L P+
Sbjct: 642 LCKEDRFEEAFDLLAEMEEKKLGPD 666
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 170/364 (46%), Gaps = 12/364 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T ++ +I K A LI +M+ P V+ T+L ++ C +
Sbjct: 207 GVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVL---CKKGKL 263
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A + K F L+S C+ +++A + + +V P + ++N+
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP-DVWTYNM 322
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS-CYSKARNLHKVLRLFDQMKR 236
++ G C G EA R+ EM + DVV+++ +I+ C+ + +L K L D+M+
Sbjct: 323 LIGGLCKD-GKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL-KGFELIDKMEG 380
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ + YN V+ K + +A + ++ MEE G +P+ VT+N+LI CKA +L E
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + DEM ++G+ T + L + R ++ + LL S K G +Y LI
Sbjct: 441 AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 500
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + K+W+E+ E P +Y +I L +GK +++ E+ E L+P
Sbjct: 501 GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560
Query: 414 EPKT 417
+ T
Sbjct: 561 DETT 564
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 143/317 (45%), Gaps = 12/317 (3%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSW-VRNDWEAAFTFFLWAGKQSGYAHSTREYHT 70
S K E+ +K+E G+K ++ + V+ W V+ L ++SG++ ++T
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 427
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I K + A+ ++DEM + VT T+L C + A +
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL---HTLCGERKLDDAYKLLSSAS 484
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN----KDVFPFNTKSFNIILNGWCNII 186
+ + V + L+ + +K+ + E + + K++ P + ++N ++ G C+
Sbjct: 485 KRGYFVDEVSYGTLI--MGYFKDGKSVEAMKLWDEMKEKEIIP-SIITYNTMIGGLCHS- 540
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + ++ E+ + G+ D +++ II Y + + K + ++M + + D
Sbjct: 541 GKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTC 600
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ L ++ A+ L + KG A + VTYN++I LCK + +EA EM +
Sbjct: 601 NILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660
Query: 307 RGISPTIRTYHAFLDII 323
+ + P TY+A L +
Sbjct: 661 KKLGPDCYTYNAILSAL 677
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 38/258 (14%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
++ ++ ++ + G+ + +F+ +I L + + L +MK D YN ++
Sbjct: 196 SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILD 255
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L K + +A L+ M+ G+ PN T+N L+ CK L EA Q D M Q + P
Sbjct: 256 VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP 315
Query: 312 TIRTYHAFL----------DIIRTGEEV----------------------------FGLL 333
+ TY+ + + R +E+ F L+
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELI 375
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ M G +P TY +++K + + + N ++ E+G PD ++ LI+
Sbjct: 376 DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKA 435
Query: 394 GKLEEAHQYYMEMKEKQL 411
G+L EA + EM K L
Sbjct: 436 GRLSEAFRMMDEMSRKGL 453
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 138/334 (41%), Gaps = 39/334 (11%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
M +++ G+K++S ++ +L + + + A+ A K+ GY Y T+I
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR-GYFVDEVSYGTLIMGY 502
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K K A L DEM+ E PS++T T+ I C ++I+
Sbjct: 503 FKDGKSVEAMKLWDEMKEKEIIPSIITYNTM---IGGLCHSGKTDQSIDKLNELLESGLV 559
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREA 192
+ ++ CR V+ A F NK V F + + NI+L G C G +A
Sbjct: 560 PDETTYNTIILGYCREGQVEKA--FQFHNKMVKKSFKPDLFTCNILLRGLCTE-GMLDKA 616
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM--KRMGIECDRKVYNAVI 250
+++ +G D V+++ IIS K + L +M K++G +C YNA++
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC--YTYNAIL 674
Query: 251 HALAKGRLVKDAISLMKSMEEKG-----------------------VAPNVVTYNSLIKP 287
ALA +K+A M + E+G PN VT++ I
Sbjct: 675 SALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINE 734
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
LC K +A E Q+GI+ TY + ++
Sbjct: 735 LCTQGKYKDAMHMVQESTQKGITLHKSTYISLME 768
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-- 272
I Y H ++F++MKR+ ++ + N +I+AL + K ++ L K++
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVR-YPSKPSVYLSKAIFSDVI 204
Query: 273 --GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
GV N T+N LI C KL EA
Sbjct: 205 KLGVKVNTNTFNILIYGCCIENKLSEA--------------------------------I 232
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
GL+ M+ C P N +Y ++ + + + ++ NG P+R+++ L+
Sbjct: 233 GLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGY 292
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
G L+EA Q M + +LP+ W+YN
Sbjct: 293 CKLGWLKEAAQVIDLMAQNNVLPDV--------WTYN 321
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 180/401 (44%), Gaps = 10/401 (2%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
G++ ++ + ++S D + F L+ + A S + +I L + A
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
L DEM + P+ VT ++I YC H++ +A ++ L
Sbjct: 518 SKLFDEMVERKIKPTEVTYN---VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574
Query: 145 LSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+S LC V A+ + +K N ++ +L+G+C G EA EM QRG
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQ-GRLTEALSASCEMIQRG 633
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
I D+V + +I K +++ ++ L +M G+ D +Y ++I A +K K +
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ M + PNVVTY + + LCK ++D A F++ML ISP TY FLD +
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G +E L M K G TY +LI+ F + + KV +E++ENG PD
Sbjct: 754 TKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDC 812
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+Y+ +I+ +G + A + + M K + P+ LL
Sbjct: 813 ITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 181/401 (45%), Gaps = 10/401 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G Y T++ +V++FD L++EM P+ L+ +R+
Sbjct: 280 REKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK--- 336
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV--FPFNTKS 174
++ A + RF F + + L++ALC+ +++ AE L++ N P N +
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAE-LLYKNMHSMNLPLNDVT 395
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++I+++ +C G AE + M + GI + ++ +I+ + K +L L+ +M
Sbjct: 396 YSILIDSFCKR-GMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+E + +I K V+ A L + M EK +AP+V T+ +LI LC ++
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
EA + FDEM++R I PT TY+ ++ ++ F LLE M G P TY L
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + +++ + + Y+AL+H G+L EA EM ++ +
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634
Query: 412 LPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVI 452
+ +L D + +Q ++R LK Q + VI
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVI 675
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 157/384 (40%), Gaps = 36/384 (9%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V +VL +D + A FF + G H+T + ++ L + + F A +L+ +
Sbjct: 65 VEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLL 124
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+ P V ++ L ++K+ KF+ + F L+ + +
Sbjct: 125 RGSDPKFVFEKFL--------------------ESHKQCKFSSTL-GFDFLVHSYLQNTR 163
Query: 154 VQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYD 207
V DA LM N + P ++ + ILNG I R+ VW E G+ D
Sbjct: 164 VFDAVVVLRLMLGNT-LLP-EVRTLSAILNGLLRI----RKFILVWEVFDESVNAGVKPD 217
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ S +I + ++ + M+ + YN +IH L KG V +A+ + K
Sbjct: 218 PYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRK 277
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG- 326
S+ EKG+ +VVTY +L+ C+ ++ D+ +EM++ G PT +D +R
Sbjct: 278 SLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKG 337
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+ + L+ + + G P Y LI + ++ + + +Y+
Sbjct: 338 NIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYS 397
Query: 385 ALIHALFLNGKLEEAHQYYMEMKE 408
LI + G L+ A Y+ M E
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIE 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 13/255 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI K F + +D M + P++VT + C V ++ RA + F
Sbjct: 676 YTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFM---NGLCKVGEIDRAGHLFE 732
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + L +L + N+++A L NT ++NI++ G+C + G
Sbjct: 733 KMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKL-G 791
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA +V EM++ GI D +++S II + ++ ++ + L+D M R G+E D +N
Sbjct: 792 RLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFN 851
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAP---------NVVTYNSLIKPLCKARKLDEAR 298
+I+ + A L M +G+ P ++ N L+ C ++D A
Sbjct: 852 LLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTAL 911
Query: 299 QAFDEMLQRGISPTI 313
+ + ML R + ++
Sbjct: 912 RLYHSMLTRAVKLSL 926
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++ ++H+ + V DA+ +++ M + P V T ++++ L + RK + FDE +
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210
Query: 306 QRGISP-------TIRTYHAFLDIIRTGEEVF-------------------------GLL 333
G+ P IR+ D R E++ G+L
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270
Query: 334 E------SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E S+R+ G + TY L+ F R +QF + + NE+ E G P ++ + L+
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
L G ++ A+ +++ LP
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLP 356
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 168/411 (40%), Gaps = 56/411 (13%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S+ IE +KV LV +VL + + A FF WAGK+ + H + Y +I L
Sbjct: 76 SDAEKAIEVLKLKVDHRLVHQVLD-IDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRCL 134
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ D W I +M IR C+V
Sbjct: 135 EESGLVDEMWRTIQDM------------------IRSPCSV------------------- 157
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSS 189
G ++ +L L + K V A + + CN +NT ++ G
Sbjct: 158 -GPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEG------HH 210
Query: 190 REAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ ++ E+ G C D +++S +IS + K RLFD+MK G+ K+Y
Sbjct: 211 EKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTT 270
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++ K V+ A+ L++ M+ KG AP V TY LIK L K ++D+A F ML+ G
Sbjct: 271 ILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDG 330
Query: 309 ISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P + + ++I+ R G E+ L M + C P TY +IK + +
Sbjct: 331 CKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEA 390
Query: 366 KVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+W E + NG P +Y LI ++E+A EM EK P P
Sbjct: 391 ALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCP 441
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 29/365 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ GK+ ++D A+ L DEM+ P+ T+L + Y ++ V A+
Sbjct: 230 TITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAM---YFKLNKVEAALR 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
K A + + L+ L + V DA L F C DV ++
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV---------VL 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N NI+G + +A +++ +M +VV+++ +I SKA L F++
Sbjct: 338 INNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAAL-WFEK 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK GI Y +I K V+ A+ L++ M+EKG P Y SLI L +A++
Sbjct: 397 MKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHA----FLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ A + F E+ + + R Y F + R + V L M+K+GC P TY
Sbjct: 457 YEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAV-DLFCEMKKLGCSPDVYTYN 515
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ R + + ENG PD S+ +++ L G + A + + +MKE
Sbjct: 516 ALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
Query: 410 QLLPE 414
+++P+
Sbjct: 576 EIMPD 580
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 12/384 (3%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S L+S R D+ AF F K++G + + Y T++A+ K+ K + A L++E
Sbjct: 234 SALISAFGKLERYDF--AFRLFDEM-KENGLHPTEKIYTTILAMYFKLNKVEAALRLVEE 290
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
M+G P++ T L I+ V V A + F+ + + L++ L R
Sbjct: 291 MKGKGCAPTVFTYTEL---IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGR 347
Query: 151 YKNVQDAEHLMFCNKDVF--PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
++DA L F D N ++N ++ + EA + +M GI
Sbjct: 348 AGRLEDALKL-FGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ +I + K + K L L ++M G Y ++I +L + + + A L +
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG- 326
++E + Y +IK +L +A F EM + G SP + TY+A + +IR G
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGM 526
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E L+ +MR+ GC P ++ +++ ++ +++ ++ E+ PD SY
Sbjct: 527 IDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNT 586
Query: 386 LIHALFLNGKLEEAHQYYMEMKEK 409
++ L G E A + EMK K
Sbjct: 587 ILSCLSRAGMFEMAAKLMREMKLK 610
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 123/298 (41%), Gaps = 43/298 (14%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--------------------- 107
+ +I ILG+ + + A L +M + P++VT T++
Sbjct: 339 NNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
ILI +C + V +A+ F + L+ +L R K +
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYE 458
Query: 156 DAEHLM-----FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
A L C + + + + +++ + N G +A ++ EM + G DV +
Sbjct: 459 AANELFQELKENCGRS----SARVYAVMIKHFGNC-GRLSDAVDLFCEMKKLGCSPDVYT 513
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ ++S +A + + L M+ G D K +N +++ LAK K AI + M+
Sbjct: 514 YNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
E + P+ V+YN+++ L +A + A + EM +G TY + L+ + +E
Sbjct: 574 ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 182/436 (41%), Gaps = 34/436 (7%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND----WEAAFTFFLWAGKQSGYAH--- 63
F H S R IE G + ++V +L ++ D E F + K+ G A
Sbjct: 70 FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129
Query: 64 -------------STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
+ R Y+ ++ L KF L M+ P++ T IL+
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN---ILL 186
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
+ C V A F + ++S+LC+ + DA L K P
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV 246
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+N +++G C G A ++ EM G+ +VVS+SCII+ + N+ L
Sbjct: 247 ----YNALIDGMCKE-GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301
Query: 231 FDQMKRMGIECDRKVYNAVIHA-LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F QM G + + + +I +G+L +A+ L K M + G PNVV YN+LI LC
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLY-EALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTND 346
L+EA Q D+M + G P + TY +D ++ G E+ +M GC+P
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++ + F + +++ G P+ ++ I L NG++E A + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 407 KEKQLLPEPKT-DELL 421
+ LP T +ELL
Sbjct: 481 QGHGCLPNITTYNELL 496
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 8/345 (2%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ S Y+ +I + K + + A L+ EM P++V+ + I C +V
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI---INSLCVSGNVE 296
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIIL 179
A F I F L+ + +A L +D N ++N ++
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C+ GS EA +V +M + G +V ++S +I ++K+ +L +++M G
Sbjct: 357 HGLCSN-GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y ++ L K + A SL++ M +G PN +T+N+ IK LC +++ A +
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475
Query: 300 AFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+ M G P I TY+ LD + EE FGL + + QP TY ++ FS
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
R G +++ + G PD +Y +IHA GK++ A Q
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 178/431 (41%), Gaps = 33/431 (7%)
Query: 39 SWVRND-WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
+ +ND +AA F+ + G Y TM++ L K K D A L G
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNK-GCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFK 241
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
PS+ L I C + AI + + ++++LC NV+ A
Sbjct: 242 PSVPVYNAL---IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 158 EHL---MF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
L MF C+ N +F ++ G C + G EA +W M Q G +VV++
Sbjct: 299 FALFAQMFLRGCDA-----NIHTFTPLIKG-CFMRGKLYEALDLWKLMIQDGCEPNVVAY 352
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I +L + L++ DQM+R G + Y+ +I AK + A M
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV-- 329
G PNVVTY ++ LCK D+A ++M G +P T++ F+ + V
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472
Query: 330 -FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
LLE M+ GC P TY L+ R ++ F ++ EI P+ +Y +++
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWS------YNKQFVERQIASLKAH 441
G + EA Q + + + P+ T + ++ + Q VER ++S+K
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER-VSSMKEW 591
Query: 442 QPQSGQNTRVI 452
P T +I
Sbjct: 592 HPDIITYTSLI 602
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 152/394 (38%), Gaps = 48/394 (12%)
Query: 35 SEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
S+VL ++ D + FF + + H+ Y MI LG+ + D ++ +M+
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
+ + +I Y V +A+ FY F + + LL AL
Sbjct: 102 MDGIN---CCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL---- 154
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ F +I ++ M + G+ +V +++
Sbjct: 155 -----------------LSENKFQMI--------------NPLYTNMKKDGLIPNVFTYN 183
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ K + +LF +M G D Y ++ +L K + DA L +
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV--- 329
P+V YN+LI +CK +++ A + EM+ G+ P + +Y ++ + V
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC T+ LIK + +W + ++G P+ +Y LIH
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L NG LEEA Q +M+ LP T +L D
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 127/310 (40%), Gaps = 23/310 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T+I L + A + D+M+ P++ T ILI +
Sbjct: 342 QDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS---ILIDGFAKSG 398
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A + + + ++ LC+ A L+ + P NT +F
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP-NTMTF 457
Query: 176 NIILNGWCNIIGSSRE--AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N + G C G+ R A ++ M G ++ +++ ++ + + LF +
Sbjct: 458 NTFIKGLC---GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++ ++ + YN V++ ++ ++ +A+ L +G AP+ +TYN++I CK K
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 294 LDEARQAFDEMLQ-RGISPTIRTYHAF-------LDIIRTGEEVFGLLESMRKMGCQPTN 345
+ A Q + + + P I TY + ++I EE L+ G P
Sbjct: 575 VKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI----EEAMAFLDKAINQGICPNF 630
Query: 346 DTYIMLIKKF 355
T+ L++ F
Sbjct: 631 ATWNALVRCF 640
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 171/371 (46%), Gaps = 11/371 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI L K KFD ++ + M+ E G L T TL I C ++ A +
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL---IHGLCGSGNLDGATRVYK 314
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + + +L+ R +++ L + S+NI++ G +
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRG---LFE 371
Query: 188 SSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+++ EA +W + ++ C D +++ ++ K L+K L + ++ + + D
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA 431
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+++I+ L + + + ++ M + G PN N++I +A KL++A + F M+
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV 491
Query: 306 QRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G PT+ TY+ ++ + E E + L++ M G +P TY +L+ + ++
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+W + E G PD + +IH L +GK+E+A Q Y EMK+++ +P T L
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611
Query: 423 DWSYNKQFVER 433
+ Y + ER
Sbjct: 612 EGFYKVRDFER 622
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F + MG+ + + YN +I + + A L+ M E+G +P+V +Y +LI L
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTN 345
K + +A + FDEM +RG++P + Y+ +D ++ E ++ P
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+Y ++I + +F F++W+ + +N G D +Y+ LIH L +G L+ A + Y E
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 406 MKEKQLLPE 414
M E + P+
Sbjct: 316 MAENGVSPD 324
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMKSME-E 271
+I +N H L +FD + R G V++ ++ L +LV +++ + +
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR-GISPTIRTYHAFLDIIRTG---E 327
K P V ++IK K D+A F M + G P IR+Y++ L+ + +
Sbjct: 73 KCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E MG P TY +LIK R +QF ++ N + E G PD SY LI
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLI 191
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
++L NG + +A + + EM E+ + P+ +L D + K
Sbjct: 192 NSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQ-RGISPTIRTYHAFLDII---RTGEEVF 330
AP ++ +IK L + A FD + + G S T +H L + + V
Sbjct: 4 APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHA 389
++E +R C+ D + +IK +++ ++ + E G P SY +L++A
Sbjct: 64 RIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
L + K +EA +++ + L P +T +L S K+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKK 163
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 15/412 (3%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDW-EAAFTFFLWAGKQSGYAHSTR 66
LRE + +R+K I + L+ S VR W E A+ + + SG +
Sbjct: 171 LREAYEAFTLLRSKGYTVSIDACNALIG---SLVRIGWVELAWRIYQEISR-SGVGVNVY 226
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+ M+ L K K + + E++ P +VT TL I Y + + A
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTL---ISAYSSQGLMEEAFELM 283
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+A F+ G+ + +++ LC++ + A+ + + P ++ ++ +L C
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP-DSTTYRSLLMEACK 342
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + E E ++ +M R + D+V FS ++S ++++ NL K L F+ +K G+ D
Sbjct: 343 K-GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y +I + ++ +A++L M ++G A +VVTYN+++ LCK + L EA + F+EM
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 305 LQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+RG+ P T +D + + L + M++ + TY L+ F +
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++W ++ P S++ L++AL G L EA + + EM K + P
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWA--LIDEMRGGETGPSLVTKQTLLILIRRYCA 115
+SG + + Y +++ + +K D + +MR + P LV +++ L R
Sbjct: 323 RSGLSPDSTTYRSLL--MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRS-- 378
Query: 116 VHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHL------MFCNKD 166
G A + K A I D + L+ CR + +A +L C D
Sbjct: 379 ----GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434
Query: 167 VFPFNTKSFNIILNGWCN--IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
V +NT IL+G C ++G EA++++ EM++RG+ D + + +I + K NL
Sbjct: 435 VVTYNT-----ILHGLCKRKMLG---EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ LF +MK I+ D YN ++ K + A + M K + P ++++ L
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTI-----------RTYHA-----FLD-IIRTG- 326
+ LC L EA + +DEM+ + I PT+ R+ +A FL+ +I G
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGF 606
Query: 327 --------------------EEVFGLLESM--RKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
+ FGL++ M ++ G P TY ++ F R Q
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEA 666
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
V ++ E G PDRS+YT+LI+ L EA +++ EM ++ P+ K
Sbjct: 667 EAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 188/469 (40%), Gaps = 61/469 (13%)
Query: 11 FSHKR--SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTRE 67
FS K+ S +RN + I+++ V EVL RND F G + H++
Sbjct: 50 FSLKQGNSNVRNHL----IRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLS 105
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGG----ETGPSLVTK--------QTLLILIRRY 113
MI IL + + A + + M R G E SLV+ +LIR +
Sbjct: 106 LSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTF 165
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNT 172
+ A AF + + V I+ L+ +L R V+ A + ++ N
Sbjct: 166 VQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNV 225
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+ NI++N C G + E+ ++G+ D+V+++ +IS YS + + L
Sbjct: 226 YTLNIMVNALCKD-GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G YN VI+ L K + A + M G++P+ TY SL+ CK
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYI 349
E F +M R + P + + + + + R+G ++ S+++ G P N Y
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404
Query: 350 MLIKKFSR-----------------------------------WRQFGNVFKVWNEISEN 374
+LI+ + R + G K++NE++E
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G PD + T LI G L+ A + + +MKEK++ + T L D
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 174/373 (46%), Gaps = 49/373 (13%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A AL+DE+ PS++T TLL Y + DVG ++ + +
Sbjct: 211 AKALMDELVCKGFKPSVITYNTLL---NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTM 267
Query: 144 LLSALCRYKNVQDAEHLM------FCNKDVFPF--------------------------- 170
L+ R +++AE L DV+ +
Sbjct: 268 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 327
Query: 171 ---NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ ++NG C G + AE + +M +G+ + V F+ ++ Y K + +
Sbjct: 328 LVPNAYTYGALINGACKA-GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 386
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
LRL + M++ G E D N + + ++A L+ +MEE+GVAPNVV+++ LI
Sbjct: 387 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 446
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
CK + EAR+ F M ++G +P++ TY+AF++ + G EE + L+ M++ G P
Sbjct: 447 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 506
Query: 345 NDTYIMLIKKFSRWRQFGNV---FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
TY LI R GNV +++NE+ + G + +YT +I L +G+ +EA +
Sbjct: 507 TYTYTSLIDG---ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 563
Query: 402 YYMEMKEKQLLPE 414
Y EM ++ ++P+
Sbjct: 564 LYDEMNKEGIVPD 576
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 10/339 (2%)
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
++ Y +I + K + A L DEM P + ++ I C ++ RA
Sbjct: 260 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI---INWNCKFGNMKRA 316
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
F + + L++ C+ ++ AE ++ +K V N FN +++
Sbjct: 317 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV-DVNRVIFNTLMD 375
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G+C G EA R+ M Q+G D + + I S + ++ + RL M+ G+
Sbjct: 376 GYCKK-GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 434
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ ++ +I K + +A L K ME+KG AP+VVTYN+ I+ CK K++EA +
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+EM +RG+ P TY + +D R V L M ++G TY ++I S+
Sbjct: 495 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 554
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ FK+++E+++ G PD Y++LI +L G L
Sbjct: 555 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 157/354 (44%), Gaps = 49/354 (13%)
Query: 143 GLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNIILNGWCNI--IGSSREAERVWM 197
++ LC+ V A+ LM C F + ++N +LNG+ I +G E +
Sbjct: 197 AVVDGLCKKGEVVRAKALMDELVCKG--FKPSVITYNTLLNGYIEIKDVGGVNE---ILS 251
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M + + Y+V +++ +I YS++ + + +LFD+M + GIE D +Y ++I+ K
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K A L M E+ + PN TY +LI CKA ++ A ++M +G+ ++
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 318 AFLD-------------------------------IIRTG-------EEVFGLLESMRKM 339
+D II +G EE LL +M +
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 431
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P ++ +LI + + + F +++ + + G P +Y A I GK+EEA
Sbjct: 432 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 491
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
++ EM+E+ L+P+ T L D V+R + L PQ G N V++
Sbjct: 492 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL-ELFNEMPQLGLNRNVVT 544
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 42/231 (18%)
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWM 197
F L+ C+ + +A L + F + + NII +G+C S+R EA+R+ +
Sbjct: 370 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCR---SNRREEAKRLLL 426
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M +RG+ +VVSFS +I Y K +N + RLF M++ G YNA I K
Sbjct: 427 TMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 486
Query: 258 LVKDAISLMKSMEEKGVAP-----------------------------------NVVTYN 282
+++A L+ M+E+G+ P NVVTY
Sbjct: 487 KMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYT 546
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGL 332
+I L K + DEA + +DEM + GI P Y + + + + G V GL
Sbjct: 547 VIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL 597
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y R L +FD ++ G E D + + AL + ++ + ++ M + G+
Sbjct: 132 YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 191
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLE 334
V ++ +++ LCK ++ A+ DE++ +G P++ TY+ L+ ++V G +L
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K TY MLI+ +SR + K+++E+ + G PD YT++I+ G
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT 417
++ A + EM E++L+P T
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYT 334
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI V S++ ++ K + + L D++ G + YN +++ + +
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V ++ ME+ V NV TY LI+ ++ K++EA + FDEML++GI P + Y
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 318 AFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ ++ + F L + M + P TY LI + + + N++
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 361
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
G +R + L+ G ++EA + M++K
Sbjct: 362 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 396
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 55/412 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y T+I+ L K K A +++EM P + T I++ R C
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYT---IIVDRLCRAG 59
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
V A F+ + + L++ LC+ +N++ A L+ +K P N ++
Sbjct: 60 KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNI-TY 118
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N IL+G C + G EA++ + M RG DVV+++ ++ K + + LF M
Sbjct: 119 NTILSGLCRM-GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 236 RMGIECDRKV------YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
DRKV YN +I + +A+ L K + KG P+ VTYNS++ L
Sbjct: 178 M----ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 233
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTY--------------------------------- 316
+ +DEA + F +M+ G +P TY
Sbjct: 234 RKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVL 293
Query: 317 --HAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+A +D++ + ++ +LE M K+G P TY +L+ + ++++ +
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+NG PD SY+ +++ L K+ +A + M E++L+P+ T +L D
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD 405
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 161/356 (45%), Gaps = 26/356 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT T+ I C V A+ + + ++ LCR V +A
Sbjct: 8 PDVVTYSTI---ISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 158 EHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+ L C+ NT ++N ++NG C R A ++ EM+ +G D +++
Sbjct: 65 DELFHKMIERGCSA-----NTVAYNALINGLCKDENIER-AYKLLEEMASKGYEPDNITY 118
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME- 270
+ I+S + + + + FD M G D YN ++ AL K V +A L K+M+
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 271 -EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG-- 326
++ VAP+++TYN+LI C+ K DEA + F +++ +G P TY++ L + R
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+E + + M GC P TY +++ R +++ E++E PD A+
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
I L K+++AH+ EM + +P+ T +L D V+ KAH+
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD------KAHE 348
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 177/367 (48%), Gaps = 12/367 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + +T Y+ +I L K + A+ L++EM P +T T+L C +
Sbjct: 73 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL---SGLCRMG 129
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTK 173
V A F + ++ + + GLL AL + V +A + + ++ V P +
Sbjct: 130 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP-DLI 188
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G+C + + EA +++ ++ +G D V+++ I+ ++ N+ + +F +
Sbjct: 189 TYNTLIDGFCRV-EKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + Y+ V+ + + + L + M EK +P+V+ N++I LCKA+K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+D+A + +EM + G P + TY+ LD + +T ++ L +M GC P +Y +
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ + + + +++ + E PD ++ L+ L GKL+EA M E
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427
Query: 411 LLPEPKT 417
+LP+ T
Sbjct: 428 VLPDGVT 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 22/362 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y+T+++ L ++ K A D M P +V LL A++
Sbjct: 110 GYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD------ALYKE 163
Query: 120 GRAINAFYAYKRF-----KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPF 170
G+ A+ +K K A + + L+ CR + +A L KDV +
Sbjct: 164 GKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLF---KDVIAKGYMP 220
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T ++N IL G + EAE ++ +M G + ++S ++S + + N+ + L L
Sbjct: 221 DTVTYNSILLGLARK-SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+++M D + NAVI L K + V DA +++ M + G P+VVTYN L+ LCK
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDT 347
+D+A + F M+ G +P I +Y L+ + +V L + M + P T
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ +L+ + + + + +SE+ PD + T L+H L + + +EA + + M
Sbjct: 400 FNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMV 459
Query: 408 EK 409
EK
Sbjct: 460 EK 461
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 166/364 (45%), Gaps = 16/364 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY T Y++++ L + D A + +M P+ T I++ +C V ++
Sbjct: 217 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS---IVLSGHCRVGNM 273
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
R + + +F+ + ++ LC+ K V DA ++ P + ++NI
Sbjct: 274 ARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVP-DVVTYNI 332
Query: 178 ILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+L+G C N++ + E ++ M G D+VS+S +++ K +H LFD+M
Sbjct: 333 LLDGLCKTNLVDKAHE---LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 389
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ D +N ++ L K + +A L+ M E V P+ VT +L+ LC+ ++ D
Sbjct: 390 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTD 449
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLL--ESMRKMGCQPTND--TYIM 350
EA + F M+++G + ++ L + R G+ LL +SM K + + D TY
Sbjct: 450 EAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTT 509
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ + + +++ +G PD +Y L++ L G+ +A + MKEK
Sbjct: 510 LVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
Query: 411 LLPE 414
L +
Sbjct: 570 FLSD 573
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 43/324 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ G+++ LCR V DA ++ + + P N ++ I+LNG C ++ A V+ E
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVP-NVFTYTILLNGLCRS-NKTKLAREVFQE 148
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G + +++ +I S+A + + LR+ + + + + D ++ L K
Sbjct: 149 MKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASR 208
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLI--------------------------------- 285
+ DA+ M+ M + GV PN VTY++L+
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYP 268
Query: 286 ---KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKM 339
LCKA LD AR++ +E+ Q G+ P + TY ++ R G + LLE MR+
Sbjct: 269 GYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRN 328
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P TY LI + R+F + F++ + G+ P+ +Y +++ L +GK++E
Sbjct: 329 GVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV 388
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
H+ Y M + + P+ T ++ +
Sbjct: 389 HRVYEMMLKSRCSPDVVTYSIIMN 412
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 48/382 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L + + A+ ++++M P++ T IL+ C + A F
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT---ILLNGLCRSNKTKLAREVFQ 147
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
KR + L+ L R + +A +M + + P + + I+ G C
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK-- 205
Query: 187 GSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ----------- 233
+SR +A + EM Q G+ + V++S ++ + + L +V+R F++
Sbjct: 206 -ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264
Query: 234 -------------------------MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ G+ D Y+ +I+ A+ ++ L++
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG- 326
M GV P+VVTY++LI LCK RK +A + + M G P + TY++ +D + ++G
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+EV + E M K C P TY +++ S+ + K++ I + GPD ++Y+
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 386 LIHALFLNGKLEEAHQYYMEMK 407
+I +L GKLEEA Y M+
Sbjct: 445 VITSLCRAGKLEEACGMYHGME 466
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 42/271 (15%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK-VYNAV 249
E R++ ++ RG+ Y ++ ++ A ++ L L ++ G+ +YN +
Sbjct: 37 EVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELS--GVYTPTVFIYNGI 94
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L + V DA +++ M E+ + PNV TY L+ LC++ K AR+ F EM + G
Sbjct: 95 ITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154
Query: 310 SPTIRTYHAFL--------------------------DIIRTGEEVFGL----------- 332
P TY + D+I V GL
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214
Query: 333 -LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW-NEISENGNGPDRSSYTALIHAL 390
+E MR+MG +P TY L+ F + + V + + E + G + ++Y + AL
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G L+ A + E+++ ++P+ T +L
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSML 305
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 41/254 (16%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+QSG Y +I + +FD + L+++MR P +VT TL+
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLI--------- 341
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
+ LC+ + QDA L+ P N ++
Sbjct: 342 -----------------------------NVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G C G E RV+ M + DVV++S I++ SKA L ++LF+ +K
Sbjct: 373 NSVMDGLCKS-GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV-TYNSLIKPLCKARKL 294
D Y+ VI +L + +++A + ME N+ L+ LC A++
Sbjct: 432 SSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRT 491
Query: 295 DEARQAFDEMLQRG 308
D AR+ + +RG
Sbjct: 492 DSARRIVEVARERG 505
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G D +F+ + + + +V+RLF + G+ Y V+ L +
Sbjct: 12 EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 261 DAISLMKSMEEKGV-APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A+ L++ E GV P V YN +I LC+A ++ +A + ++M++ I P + TY
Sbjct: 72 QALELVR--ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTIL 129
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L+ GL S N T K +R +V+ E+ NG P+
Sbjct: 130 LN---------GLCRS---------NKT------KLAR--------EVFQEMKRNGCKPN 157
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+Y LI L G+++EA + +E + +L
Sbjct: 158 PITYGTLIQHLSRAGEIDEALRVMIEQRSLEL 189
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
L +S+ E G + + L L + K E + F + RG+ TY +D +
Sbjct: 6 LERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLC 65
Query: 325 TGEEVFGLLESMRKMGC--QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
LE +R++ PT Y +I R + + +KV ++ E P+ +
Sbjct: 66 GAGMANQALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWS 425
YT L++ L + K + A + + EMK P P T L+Q S
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLS 169
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 14/308 (4%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLMFCNKDVFP-----FNT 172
V A F+ R+ V ++ LS L C ++ ++ A + + FP +NT
Sbjct: 187 VLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVF----EEFPELGVCWNT 242
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
S NI+L+ C + G REA + ++M+ RG DVVS+ ++S Y + L KVL+L D
Sbjct: 243 VSCNIVLHCLCQL-GKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++K G++ D +YN +I L K V +A L++ M + GV P+ V Y ++I CK
Sbjct: 302 ELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYI 349
+ A + FDEM ++ I P I TY + + I ++G+ V + M G +P TY
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYT 421
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI + + + F V N++ + G P+ +YTAL L NG+++ A++ EM K
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481
Query: 410 QLLPEPKT 417
L P T
Sbjct: 482 GLQPNVYT 489
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 143/282 (50%), Gaps = 7/282 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ LC+ V +AE L+ + VFP N + +++G+C + G+ A +++ E
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV-VYTTVISGFCKL-GNVSAACKLFDE 372
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++ I D+V+++ +I K+ + + +F++M G+E D Y A+I K
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+K+A S+ M +KG+ PNVVTY +L LCK ++D A + EM ++G+ P + TY+
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + + G E+ L+E M G P TY L+ + + + ++ +
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P ++ L++ ++G LE+ + M EK ++P T
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATT 594
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 172/373 (46%), Gaps = 28/373 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I+ K+ A L DEMR + P +VT ++ +H + ++
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSV---------IHGICKSGKMVE 400
Query: 128 AYKRFK--FAVGIED----FQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIIL 179
A + F G+E + L+ C+ +++A H K + P N ++ +
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP-NVVTYTALA 459
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C G A + EMS++G+ +V +++ I++ K N+ + ++L ++M G
Sbjct: 460 DGLCKN-GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGF 518
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D Y ++ A K + A L++ M K + P +VT+N L+ C + L++ +
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578
Query: 300 AFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ ML++GI P T+++ + + +R E++ ++M G P ++TY +LIK
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIY---KAMHDRGVMPDSNTYNILIK 635
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R + + E+ E G ++Y ALI + K EA + + EM++ L+
Sbjct: 636 GHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVA 695
Query: 414 EPKTDELLQDWSY 426
E ++ D +Y
Sbjct: 696 EKDIYDIFVDVNY 708
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y + L K + D A L+ EM P++ T T+ + C +
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI---VNGLCKIG 501
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ + + F + L+ A C+ + A L+ NK + P +F
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP-TLVTF 560
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C + G + ER+ M ++GI + +F+ ++ Y N+ ++ M
Sbjct: 561 NVLMNGFC-MSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L K M EKG + TY++LI+ K +K
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F+EM + G+ Y F+D+
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDV 706
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYS-KARNLHKVLRLFDQMKRMGIECDRKV 245
G EA++++ ++ + G+ V S + +S S + +++F++ +G+ +
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
N V+H L + V++A +L+ M ++G P+VV+Y ++ C+ +LD+ + DE+
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 306 QRGISPTIRTYH-AFLDIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G+ P Y+ L + + GE E LL MRK G P N Y +I F +
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
K+++E+ PD +YT++IH + +GK+ EA + + EM K L P+ T L
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Query: 423 DWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQD 459
D Y K ++ S+ Q G V++ + D
Sbjct: 425 D-GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 39/288 (13%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+D + ++N +++ C G REA +++ EM G D V+F+ ++ Y KAR
Sbjct: 249 EDGIELDRYTYNTLIS-CCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRH 307
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + + +M+ G YN++I A K L+++A+ L + ME +G+ P+VVTY +L
Sbjct: 308 EEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 367
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------DIIRTG-- 326
I L + K+D A + EM++ G SP + TY+A + D +R+
Sbjct: 368 ISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGY 427
Query: 327 --------------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
EV G+ + M+K G P DTY+ LI +SR F +
Sbjct: 428 VPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 487
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ + E G PD S+Y A++ AL G+ +A + + EM+++ P+
Sbjct: 488 IYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPD 535
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 3/247 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N++L+ + + +E + M + GI D +++ +ISC + + ++FD+
Sbjct: 222 TYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDE 281
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G E D+ +N+++ K R ++AI ++K ME G P+VVTYNSLI K
Sbjct: 282 MKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGL 341
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
L+EA + EM RG+ P + TY LD I + M + GC P TY
Sbjct: 342 LEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNA 401
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK +F + V++++ G PD ++ L+ NG E + EMK+
Sbjct: 402 LIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 461
Query: 411 LLPEPKT 417
+PE T
Sbjct: 462 YIPERDT 468
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSK-ARNLHKVLRLFDQMKRMGIECDRKV 245
G R+A V+ M G+ +V+++ ++ YSK + +V+ L D MK GIE DR
Sbjct: 199 GRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYT 258
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I + L ++A + M+ G P+ VT+NSL+ KAR+ +EA +M
Sbjct: 259 YNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKME 318
Query: 306 QRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G +P++ TY++ + ++ G EE L + M G +P TY LI R +
Sbjct: 319 NAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKID 378
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++E+ NG P+ +Y ALI + GK E + +++ +P+
Sbjct: 379 AALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPD 430
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 7/235 (2%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV-KDAISL 265
D +++ ++S +S+A + +F +M G++ YN V+H +K + K+ + L
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKL-DEARQAFDEMLQRGISPTIRTYHAFLDI-- 322
+ SM+E G+ + TYN+LI C+ R L EA Q FDEM G P T+++ LD+
Sbjct: 244 VDSMKEDGIELDRYTYNTLIS-CCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 323 -IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
R EE G+L+ M GC P+ TY LI + + ++ E+ G PD
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQI 435
+YT LI L GK++ A Y EM P T + L++ +F E I
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMI 417
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 152/388 (39%), Gaps = 82/388 (21%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I+ L ++ K D A A EM P+L T L+ +H V
Sbjct: 364 YTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALI-------KMHGV-------- 408
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
R KF + F L SA DV +NT NG
Sbjct: 409 ---RGKFTEMMIVFDDLRSA--------------GYVPDVVTWNTLLAVFGQNGL----- 446
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E V+ EM + G + ++ +IS YS+ + + ++ +M GI D YN
Sbjct: 447 -DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 505
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD------------ 295
AV+ ALA+G A L ME++ P+ ++Y+SL+ A+KLD
Sbjct: 506 AVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQ 565
Query: 296 -----------------------EARQAFDEMLQRGISPTIRTYHAFLDI------IRTG 326
E +AF E+ +R S I +A + I ++
Sbjct: 566 RIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV 625
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EEV L M++ + TY L+ +SR + EI +G PDR SY +
Sbjct: 626 EEVLTL---MKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTV 682
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPE 414
I+A G+++EA + + EMK + P+
Sbjct: 683 IYAYGRKGQMKEASRLFSEMKCSGVKPD 710
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 153/364 (42%), Gaps = 26/364 (7%)
Query: 30 SSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
S+ V +V++W +N ++ + K++GY Y ++I+ + FD
Sbjct: 424 SAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 483
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + M P + T +L + R GR + A + + D
Sbjct: 484 QAMEIYKRMIEAGIYPDISTYNAVLSALAR------GGRWVQAEKLFAEMEDRDCKPDEL 537
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEM 199
S L Y N + + + ++D++ + N ++ N + S E E+ + E+
Sbjct: 538 SYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQEL 597
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+R D+ + ++S Y K + + KV + MK I YN+++H ++
Sbjct: 598 RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDC 657
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ +++ ++ G+ P+ +YN++I + ++ EA + F EM G+ P I TY+ F
Sbjct: 658 EKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIF 717
Query: 320 LDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ-------FGNVFKVWN 369
+ EE L+ + GC+P TY +++ + R + N+ K++
Sbjct: 718 IKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYP 777
Query: 370 EISE 373
IS+
Sbjct: 778 GISK 781
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 132/318 (41%), Gaps = 41/318 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G+ +++++ + GK R+ + A ++ +M PS+VT +L
Sbjct: 283 KAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSL---------- 332
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
I+A+ ++D GLL K + + DV + T
Sbjct: 333 ------ISAY-----------VKD--GLLEEALELKQEMEFRGM---KPDVVTYTT---- 366
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G + IG A + EM + G ++ +++ +I + +++ +FD ++
Sbjct: 367 -LISGL-DRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRS 424
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D +N ++ + L + + K M++ G P TY SLI + D+
Sbjct: 425 AGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQ 484
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIK 353
A + + M++ GI P I TY+A L + G + L M C+P +Y L+
Sbjct: 485 AMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLH 544
Query: 354 KFSRWRQFGNVFKVWNEI 371
++ ++ + + +I
Sbjct: 545 AYANAKKLDKMKALSEDI 562
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 12/368 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y++ I L K+ + A + +M P +V+ TL I YC + ++
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL---IYGYCRLGNL 390
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A F + I + LL LCR ++ A+ L N+ + P + ++ I
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP-DIVTYTI 449
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C + GS A+ + EM G+ D +++ I K + + L ++M
Sbjct: 450 LVNGSCKM-GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D +YN V+ L K +++A L++ M GV P+ VTY S+I + +L +
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG----EEVFGLLESMRKMGCQPTNDTYIMLIK 353
R+ F EML +G++P++ TY + G E F M++ G P TY LI
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHG-HAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ R+ + + E+ E G P++ SYT LI+ G +EA Y +M ++ + P
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Query: 414 EPKTDELL 421
+ T L
Sbjct: 688 DSCTHSAL 695
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 178/402 (44%), Gaps = 20/402 (4%)
Query: 27 IKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW- 85
+ V +L VLS R A F WA Q G+ S + ++ IL + +A+
Sbjct: 77 VIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYW 136
Query: 86 -----------ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
++D + GG S V+ + L +LI Y V + ++ F + +
Sbjct: 137 VMERVINANMHRIVDVLIGGCVS-SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRL 195
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--SFNIILNGWCNIIGSSREA 192
+ +++ +L L R K++ ++ F ++N +L+ +C G ++
Sbjct: 196 SPDVKNCNRILRIL-RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKG-GKVQQG 253
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ EM +RG + V+++ +I+ SK + L +M + G++ YN +I+
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
++ +A+SL + M KG +P V TYNS I LCK ++ +A Q +ML + P
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 313 IRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ +Y+ + R G + F L + +R + PT TY L+ R + ++
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
E+ G PD +YT L++ G L A +++ EM + L
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + +N++++G C + G+ EA + +M G+ D V+++ II + + L K
Sbjct: 510 FPPDLIIYNVVVDGLCKL-GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +M G+ Y +IH A KGRL + A M+EKG+ PNV+TYNSLI
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER-AFIYFSEMQEKGILPNVITYNSLIN 627
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQP 343
LCK R++D+A F EM+++GI P +Y ++ + +E L + M G QP
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687
Query: 344 TNDTYIMLIKKFSR 357
+ T+ L+K+ +
Sbjct: 688 DSCTHSALLKQLGK 701
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N + G C + G +A + +M + DVVS++ +I Y + NL K LFD+
Sbjct: 341 TYNSFIYGLCKL-GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++ + + YN ++ L + ++ A L M +G+AP++VTY L+ CK
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 294 LDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
L A++ FDEML G+ Y + ++ G+ F L E M G P Y +
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ + ++ ++ +G PD +YT++IHA NG+L + + + EM K
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Query: 411 LLPEPKTDELLQDWSYNKQFVER 433
L P T +L K +ER
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLER 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ K + ++ M GI+ YN ++ + KG V+ + L+ M+ +G APN VTYN
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMG 340
LI L K + ++A+ EML+ G+ + TY+ + G E L E M G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
PT TY I + + + + +++ N PD SY LI+ G L +A
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ E++ L P T L D
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLD 417
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ LC+ N+++A L+ + V P +II N G R+ ++ E
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN--GRLRKGREIFYE 574
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +G+ VV+++ +I ++ L + F +M+ GI + YN++I+ L K R
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 259 V-----------------------------------KDAISLMKSMEEKGVAPNVVTYNS 283
+ ++A+SL K M ++GV P+ T+++
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694
Query: 284 LIKPLCKARKLDEARQ 299
L+K L K KL RQ
Sbjct: 695 LLKQLGKDCKLQAVRQ 710
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTND 346
K +++ FD+M++ +SP ++ + L I+R + + +E R MG +PT
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY L+ + + + + +E+ G P+ +Y LI+ L G+ E+A EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 407 KEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKS 456
+ L T L +NK + + SL+ G + V + S
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEAL-SLQEEMVLKGASPTVATYNS 344
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 43/324 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ G+++ LCR V DA ++ + + P N ++ I+LNG C ++ A V+ E
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVP-NVFTYTILLNGLCRS-NKTKLAREVFQE 148
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G + +++ +I S+A + + LR+ + + + + D ++ L K
Sbjct: 149 MKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASR 208
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLI--------------------------------- 285
+ DA+ M+ M + GV PN VTY++L+
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYP 268
Query: 286 ---KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKM 339
LCKA LD AR++ +E+ Q G+ P + TY ++ R G + LLE MR+
Sbjct: 269 GYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRN 328
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P TY LI + R+F + F++ + G+ P+ +Y +++ L +GK++E
Sbjct: 329 GVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV 388
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
H+ Y M + + P+ T ++ +
Sbjct: 389 HRVYEMMLKSRCSPDVVTYSIIMN 412
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 48/382 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L + + A+ ++++M P++ T IL+ C + A F
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT---ILLNGLCRSNKTKLAREVFQ 147
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
KR + L+ L R + +A +M + + P + + I+ G C
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK-- 205
Query: 187 GSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ----------- 233
+SR +A + EM Q G+ + V++S ++ + + L +V+R F++
Sbjct: 206 -ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264
Query: 234 -------------------------MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ G+ D Y+ +I+ A+ ++ L++
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG- 326
M GV P+VVTY++LI LCK RK +A + + M G P + TY++ +D + ++G
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+EV + E M K C P TY +++ S+ + K++ I + GPD ++Y+
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 386 LIHALFLNGKLEEAHQYYMEMK 407
+I +L GKLEEA Y M+
Sbjct: 445 VITSLCRAGKLEEACGMYHGME 466
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 43/281 (15%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK-VYNAV 249
E R++ ++ RG+ Y ++ ++ A ++ L L ++ G+ +YN +
Sbjct: 37 EVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELS--GVYTPTLFIYNGI 94
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L + V DA +++ M E+ + PNV TY L+ LC++ K AR+ F EM + G
Sbjct: 95 ITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154
Query: 310 SPTIRTYHAFL--------------------------DIIRTGEEVFGL----------- 332
P TY + D+I V GL
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214
Query: 333 -LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW-NEISENGNGPDRSSYTALIHAL 390
+E MR+MG +P TY L+ F + + V + + E + G + ++Y + AL
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF 430
G L+ A + E+++ ++P+ T L+ ++ QF
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+QSG Y +I + +FD + L+++MR P +VT TL+
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLI--------- 341
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
+ LC+ + QDA L+ P N ++
Sbjct: 342 -----------------------------NVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G C G E RV+ M + DVV++S I++ SKA L ++LF+ +K
Sbjct: 373 NSVMDGLCKS-GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV-TYNSLIKPLCKARKL 294
D Y+ VI +L + +++A + ME N+ L+ LC A +
Sbjct: 432 SSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERT 491
Query: 295 DEARQAFDEMLQRG 308
D AR+ + +RG
Sbjct: 492 DSARRIVEVASERG 505
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 42/374 (11%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF----------------- 126
A+ + +M+ P+L+T TLL + RY + H V + AF
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213
Query: 127 --YAY---KRFKFAVGIEDFQG-------------LLSALCRYKNVQDAEHLMFCNKD-- 166
Y Y +FK AV + G +L ALC+ + DA L+ K
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P N ++NI++ G+C + G +EA V M+Q + DV +++ +I+ + +
Sbjct: 274 LLP-NRNTYNILVYGYCKM-GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEE 331
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+L D+M+ + + D YN +I+ + + +A L++ M EKGV PN VT+N ++K
Sbjct: 332 AFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVK 391
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQP 343
CK K+D+A +M + G SP TY+ ++ + G E F ++ M + +
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ T +++ R ++ +K+ + + G D SY LI F +G ++ A + +
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 404 MEMKEKQLLPEPKT 417
EMKEK+++P T
Sbjct: 512 DEMKEKEIIPSTVT 525
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 45/386 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-------------------- 107
Y+ +I L + + A+ L DEM + P +V+ TL+
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
I+++ YC + A N + F+ + L++ C+ N+
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435
Query: 156 DAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+A M + ++ + N IL C EA ++ +RG D VS+ +
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCR-EKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I Y K N+ + L+L+D+MK I YN +I L + + AIS + + E G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
P+ TYN+++ C+ +++A Q ++M++ P + T +I+ G + G+LE
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT----CNILLRGLCMEGMLE 610
Query: 335 SMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
K+ G TY LI + + + F + +E+ E GPD +Y A+I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
AL +G++ EA ++ +M EK LP
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 44/402 (10%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ N ++ A F GK + + Y+T++ L K + A L+ +M+ P+
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVT-YNTILDALCKKGRLGDARDLLMDMKSRGLLPN- 277
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ T IL+ YC + + A N + + + L++ LC +++A L
Sbjct: 278 --RNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 161 M--FCNKDVFPFNTKSFNIILNG---WCNII----------------------------- 186
N + P + S+N ++NG W I
Sbjct: 336 RDEMENLKLLP-DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 187 --GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +A +M + G D V+++ +I+ Y KA N+ + R D+M R ++ D
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
N ++ L + + +++A L+ S ++G + V+Y +LI K +D A + +DEM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 305 LQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ I P+ TY+ + + + G E+ L + + G P TY ++ + R
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
F+ N++ EN PD + L+ L + G LE+A + +
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 166/439 (37%), Gaps = 69/439 (15%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
R EM N + + L++ L W + AF L + G + ++ M+
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSK--ISEAFKL-LEEMSEKGVKPNAVTHNIMVKW 392
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K K D A I +M P VT TL I YC ++G A R
Sbjct: 393 YCKEGKMDDASNTITKMEESGFSPDCVTYNTL---INGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ +L LCR K +++A L+ K + + S+ ++ G+ G+ A
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD-GNVDRAL 508
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA- 252
++W EM ++ I V+++CII + + + +++ G+ D YN ++H
Sbjct: 509 KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGY 568
Query: 253 ----------------------------------LAKGRLVKDAISLMKSMEEKGVAPNV 278
L +++ A+ L + KG A +
Sbjct: 569 CREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDT 628
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRK 338
VTYN+LI LCK +LD+A EM ++ + P TY+A + + + E M K
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688
Query: 339 M---GCQP-------TNDTYIML----------------IKKFSRWRQFGNVFKVWNEIS 372
M G P N+T + IK+ ++ + +++ E
Sbjct: 689 MLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748
Query: 373 ENGNGPDRSSYTALIHALF 391
+ G D+S+Y L+ L
Sbjct: 749 QKGITVDKSTYINLMDGLI 767
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F+ ++GI + +N VI+ KDA+ + M + +P+ VTYN+++ LCK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCK 255
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDT 347
+L +AR +M RG+ P TY+ + + G +E ++E M + P T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y MLI + FK+ +E+ PD SY LI+ K+ EA + EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 408 EKQLLPEPKTDELLQDW 424
EK + P T ++ W
Sbjct: 376 EKGVKPNAVTHNIMVKW 392
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK---ARKLDEARQ 299
+ + + I A + A + K M+ + PN++T N+L+ L + + + +R+
Sbjct: 135 KALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE 194
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLI 352
AF++ ++ GI P + T+ +I+ G ++ L M K C P N TY ++
Sbjct: 195 AFNDAIKLGIVPNVNTF----NIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + G+ + ++ G P+R++Y L++ G L+EA M + LL
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 413 PEPKTDELLQDWSYN 427
P+ W+YN
Sbjct: 311 PDV--------WTYN 317
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
++ AW L +M+ P++ T L I C + AI F+ R
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L++ L + ++ A ++ ++ N ++N ++ G+C I+G ++A V M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC-ILGDPKKAMLVMNNM 451
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
QRG ++V+++ II Y + N LR+ D M+ G + D Y +I K +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ A L M + G+ PN VTY +LI CK KLD A + M + G P ++TY+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 320 LDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + G L + M + G P TY +I + +++N++ E G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y++LI AL GK+EEA + E++ L+P+ T
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 12/360 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K A ++ ++ E P T ++++ +C HD+ A+ F
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMIL---GHCRKHDLDSALQVFN 274
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ LC V +A L M + + +T + II C+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII--ALCD 332
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G +A R++++M +G +V +++ +IS + L + LF +M R G+ +
Sbjct: 333 M-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA+I+ L + R +K A ++ M G +PN+VTYN +IK C +A + M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
LQRG S + TY+ + +G L L+ MR GC+P +Y LI F + +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ F ++NE+ ++G P+ +YTALI + KL+ A MK P +T +L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 21/383 (5%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+M+NK E + + L+S + V + A F + G +T Y+ +I IL
Sbjct: 345 DMKNKGCEPNVYTYTALISGL--CVSGLLKVAIGLFHRMSRD-GVFPNTVTYNALINILV 401
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R+ A+ +++ M P++VT + I+ YC + D +A+ + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEM---IKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ + ++ C N A ++ C D + S+ ++ G+C I
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW-----SYTELICGFCKI-SKME 512
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A ++ EM G+C + V+++ +I Y K L L + MKR G + + YN +I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L K A L K M E+G+ PNVVTY ++I LCK A + F++M+++G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY + + + + G EE L + + G P TY+ +I+ + + + F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 368 WNEISENGNGPDRSSYTALIHAL 390
+ + G P +Y LI L
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL 715
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 171/383 (44%), Gaps = 23/383 (6%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
++D ++A F K+ G +T Y T+I L + + A+ LI EM P+
Sbjct: 263 KHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 102 TKQTLLILIRRYCAVHDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
T +I A+ D+G +A F K + + L+S LC ++ A
Sbjct: 322 TCTGPII------ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSC 213
L VFP NT ++N ++N I+ +R + ++ M + G ++V+++
Sbjct: 376 GLFHRMSRDGVFP-NTVTYNALIN----ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + K + + + M + G + YN +I A+ ++ M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---F 330
P+ +Y LI CK K++ A F+EM+ G+ P TY A +D E++
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LLE M++ GC+P TY +LI ++ F ++ + E G P+ +YTA+I L
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
NG A + + +M E+ LP
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLP 633
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 145/356 (40%), Gaps = 53/356 (14%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF------CNKDVFPF------------------------ 170
+ +++ALC+ NV DAE +M + D F +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 171 ------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI------CYDVVSFSCIISCY 218
NT +++ ++NG C+ G EA + EM GI C + C + CY
Sbjct: 278 KEGCEPNTVTYSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
A RLF MK G E + Y A+I L L+K AI L M GV PN
Sbjct: 337 EDA------WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
VTYN+LI L + R++ A + M + G SP I TY+ + I+ ++ ++ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G TY +IK + + ++ + + + G PD SYT LI K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
+E A + EM + L P T L D Y K SL H +SG V
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALID-GYCKDEKLDTATSLLEHMKRSGCRPNV 565
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+SQ G+ + ++S ++ S+ V+ + +M G++ + +YNAVI+AL K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA ++MK + E ++P+ TY S+I C+ LD A Q F++M + G P TY
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + +G E F L+ M G PT T I + + ++++ ++ G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YTALI L ++G L+ A + M + P T
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 154/385 (40%), Gaps = 34/385 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K+ K ++A+ L +EM P+ VT L I YC + A +
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL---IDGYCKDEKLDTATSLLE 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
KR ++ + L+ L + N AE L + + +FP N ++ +++G C
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP-NVVTYTAMIDGLCKN 613
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS+ A ++ +M ++G +++++S +I + + + LF +++R G+ D
Sbjct: 614 -GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA----- 300
Y +I A V+ A + + M + G P + TY LIK L L + R A
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 301 -------FDEMLQRGISP------------TIRTYHAFLDIIRTGE---EVFGLLESMRK 338
+ Q +S +++ +A + + T E LL SM
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P + Y L+ R R V+ +S G + Y LI AL + +E
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M + P+ +L D
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLID 877
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
I SC+SK + + + D + + G+ Y+A++ L++ + + M +G
Sbjct: 152 IKSCHSK-EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGE 327
V PN++ YN++I LCK + +A ++ + +SP TY H + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+VF M K GC+P TY LI + F + E+ +G P + T I
Sbjct: 271 QVF---NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL G E+A + +++MK K P T
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++S S A + L M G+ D++ YN+++ +L + R V A+ + K M +G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-----E 327
++ Y LI LC+ + EAR F+ ML R +P +D ++R G
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
E ++E+ R M P+ Y +L ++ S+ R + +V
Sbjct: 890 EFLHIMETRRYM---PSFHIYTILAREASKKRSWKHV 923
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 175/380 (46%), Gaps = 21/380 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI L K+ +FD + + + M+ E L T +L+ C + DVG A
Sbjct: 258 YNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLI------CGLCDVGNVDGAVE 311
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
YK V + + LL+ CR ++++ L N S+NI + G
Sbjct: 312 VYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRG--- 368
Query: 185 IIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ +R EA VW + +RG D ++ +I K +L+K L++ + K G +
Sbjct: 369 -LFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL 427
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y++++ L+K V +A+ ++ M++ G + N LI +A KL+EA F
Sbjct: 428 DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFF 487
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
EM +G SPT+ +Y+ ++ + E + + ++ M + +P TY +L+ +
Sbjct: 488 REMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQG 547
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
++ +W ++ G PD + + L+H L GK+E+A Y MK+ LP T
Sbjct: 548 KKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTH 607
Query: 419 ELLQDWSYNKQFVERQIASL 438
L D Y + E ++AS+
Sbjct: 608 NTLMDGLYKAR--ECEMASV 625
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
S++ +++ + +A L K + +GI + + YN +I K R +A L+ M
Sbjct: 116 SYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWM 175
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE 328
K + P+V +Y ++I + K+ L A + FDEM +RG+ P + Y+ +D + G+
Sbjct: 176 WSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDY 235
Query: 329 VFG--LLESMRKMGC-QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
V G + E + K C P TY ++I + +F ++W + +N D +Y++
Sbjct: 236 VQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSS 295
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQ 410
LI L G ++ A + Y EM ++
Sbjct: 296 LICGLCDVGNVDGAVEVYKEMVKRS 320
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 153/354 (43%), Gaps = 12/354 (3%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
+F LW H+ Y+ I L + RK + A ++ + +R +G T +L
Sbjct: 344 SFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGAD---STTYGVL 400
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVF 168
I C + +A+ K + + ++ L + V +A ++ +K
Sbjct: 401 IHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGC 460
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERV--WMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ N ++NG+ + +S+ E + + EM +G VVS++ +I+ KA
Sbjct: 461 ELSPHVCNPLINGF---VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSD 517
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+M + D Y+ ++ L +G+ + A++L + + KG+ P+V +N L+
Sbjct: 518 AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMH 577
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LC A K+++A + M Q P + T++ +D + R E + M K G QP
Sbjct: 578 GLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+Y + +K + + ++++ +NG P ++ L+ A+ G L+
Sbjct: 638 DIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 179/404 (44%), Gaps = 58/404 (14%)
Query: 12 SHKRSEMRNKIEEC------------GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS 59
++ +S+M N+ +C GI+ + L++ + N E A +F + +
Sbjct: 87 AYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIE--ANLLEKAESFLAYF-ETV 143
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y+ +I I K R+F A L+D M + P V+
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPD----------------VYSY 187
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
G IN G+ L+SAL + MF + + P + +NI++
Sbjct: 188 GTVIN------------GMVKSGDLVSALEVFDE-------MF-ERGLVP-DVMCYNIMI 226
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+G+ G + + +W + + Y +VV+++ +I+ K + L ++++MK+
Sbjct: 227 DGFFKR-GDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
E D Y+++I L V A+ + K M ++ V +VVTYN+L+ C+A K+ E+
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF 345
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + M+ + + +Y+ F+ + R EE + E +R+ G + TY +LI
Sbjct: 346 ELW-VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGL 404
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ K+ E + G+ D +Y++++ L G+++EA
Sbjct: 405 CKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 155/439 (35%), Gaps = 116/439 (26%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
++A F A +Q GY HS H + IL ++ + + +T T+
Sbjct: 24 KSALALFDSASRQPGYTHSP---HIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDV 80
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
+L +++ Y A++ F Q E + C
Sbjct: 81 VLTVLKAYAKSKMPNEALDCF----------------------------QKMEEIFGCKP 112
Query: 166 DVFPFNTKSFNIILNGW--CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+ +S+N +LN + N++ +AE GI ++ +++ +I K R
Sbjct: 113 GI-----RSYNALLNAFIEANLL---EKAESFLAYFETVGILPNLQTYNILIKISVKKRQ 164
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN------ 277
+ L D M ++ D Y VI+ + K + A+ + M E+G+ P+
Sbjct: 165 FVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNI 224
Query: 278 ------------------------------VVTYNSLIKPLCKARKLDE----------- 296
VVTYN +I LCK + DE
Sbjct: 225 MIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKN 284
Query: 297 ------------------------ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEV 329
A + + EM++R + + TY+A L+ R G +E
Sbjct: 285 ECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES 344
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M K C +Y + I+ R+ VW + G+G D ++Y LIH
Sbjct: 345 FELWVMMGKENCHNVV-SYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHG 403
Query: 390 LFLNGKLEEAHQYYMEMKE 408
L NG L +A + E K+
Sbjct: 404 LCKNGHLNKALKILKEAKD 422
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 33/215 (15%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q G + F I+ S + + V R+ + +K +C V V+ A AK ++
Sbjct: 36 QPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPN 95
Query: 261 DAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+A+ + MEE G P + +YN+L+ +A L++A GI P ++TY+
Sbjct: 96 EALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYN-- 153
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+LIK + RQF + + + PD
Sbjct: 154 ------------------------------ILIKISVKKRQFVEAKGLLDWMWSKDLKPD 183
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
SY +I+ + +G L A + + EM E+ L+P+
Sbjct: 184 VYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPD 218
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE------V 329
P ++ L K L KA K ++ A + R T + H FL I+R + V
Sbjct: 5 PKPLSARQLFK-LLKAEKSPKSALALFDSASRQPGYT-HSPHIFLLILRRLSDPKLVVHV 62
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIH 388
++E ++ C+ T D + ++K +++ + + ++ E G P SY AL++
Sbjct: 63 TRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLN 122
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK-QFVERQ 434
A LE+A + + +LP +T +L S K QFVE +
Sbjct: 123 AFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAK 169
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 17/351 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ M+ + + KF A L+D MR P L++ T LI R A+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNT-LINARLKSGGLTPNLAVELLD 286
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
+ + LLSA R N+ A + C D++ +N I + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM---ISVYG 343
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G + EAER++ME+ +G D V+++ ++ +++ RN KV ++ QM++MG
Sbjct: 344 RC---GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEE-KGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN +IH K + A+ L K M+ G P+ +TY LI L KA + EA
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
EML GI PT++TY A + + G EE M + G +P N Y +++ R
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ + ++ ++ +G+ P + Y +I L + ++ + +M+E
Sbjct: 521 GNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+S NI+L+ C + G E V E+ G S ++ +++A N+ +V ++
Sbjct: 821 TVESINILLHALC-VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ MK G ++Y +I L KG+ V+DA ++ MEE + +NS++K
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
+ Q + + + G+ P TY+ + + R EE + L++ MR +G P DT
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI F + + +++ E+ G DRS Y ++ +G +A + MK
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 408 EKQLLPEPKTDELLQ---DWSYNKQFVERQIASLK 439
+ P T LL S N Q E+ +++LK
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 160/362 (44%), Gaps = 8/362 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+QSG + ++++++ + ++ A A+ + M GPS T +++ IL+ C
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM--RDGPS-PTVESINILLHALCVD 835
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNT-KSF 175
+ + F + +L A R N+ + + + K T + +
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ C R+AE + EM + ++ ++ ++ Y+ + K ++++ ++K
Sbjct: 896 RMMIELLCKG-KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D YN +I + R ++ LM+ M G+ P + TY SLI K + L+
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLI 352
+A Q F+E+L +G+ YH + I R + + LL+ M+ G +PT T +L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+S KV + + + Y+++I A + + +EMK++ L
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 413 PE 414
P+
Sbjct: 1135 PD 1136
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL--RLFDQMKRMGIECDRK 244
G +A+ + M QRG D++SF+ +I+ K+ L L L D ++ G+ D
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++ A ++ + A+ + + ME P++ TYN++I + EA + F E+
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+G P TY++ L R E+V + + M+KMG TY +I + + Q
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 362 GNVFKVWNEISE-NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ ++ +G PD +YT LI +L + EA EM + + P +T
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 132/349 (37%), Gaps = 57/349 (16%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ L E+L VRN SG Y+T+++ + D A +
Sbjct: 276 LTPNLAVELLDMVRN---------------SGLRPDAITYNTLLSACSRDSNLDGAVKVF 320
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
++M P L T ++ + R + R F AV + LL A
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV---TYNSLLYAF 377
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
R +N + + + V+ +M + G D
Sbjct: 378 ARERNTE-----------------------------------KVKEVYQQMQKMGFGKDE 402
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ II Y K L L+L+ MK + G D Y +I +L K +A +LM
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M + G+ P + TY++LI KA K +EA F ML+ G P Y LD++ G
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 328 EV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
E +GL M G P+ Y ++I + + ++ K ++ E
Sbjct: 523 ETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFD 232
SFN ++N G + ++M + G+ D ++++ ++S S+ NL +++F+
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M+ + D YNA+I + L +A L +E KG P+ VTYNSL+ + R
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTY 348
++ ++ + +M + G TY+ + + ++ L+ + M G P TY
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI + + + +E+ + G P +Y+ALI GK EEA + M
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 409 KQLLPE 414
P+
Sbjct: 502 SGTKPD 507
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 179 LNGWCNIIGSSR----------------EAERVWMEMSQRG------ICYDVVSFSCIIS 216
++GWC GSS EA +V+ ++ G +C +V C +
Sbjct: 673 VHGWC--FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLG 730
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
A H+V+ + K C +Y +I A K +L + A S++ ++ + G P
Sbjct: 731 FPETA---HQVVNQ-AETKGFHFACS-PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 785
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLL 333
++ T+NSL+ + + AR F+ M++ G SPT+ + + L + EE++ ++
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
E ++ MG + + + ++++ F+R V K+++ + G P Y +I L
Sbjct: 846 EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Query: 394 GKLEEAHQYYMEMKE 408
++ +A EM+E
Sbjct: 906 KRVRDAEIMVSEMEE 920
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE--ARQAF 301
+VYNA++ ++ A L+ +M ++G P+++++N+LI K+ L A +
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRW 358
D + G+ P TY+ L + G + E M CQP TY +I + R
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+++ E+ G PD +Y +L++A E+ + Y +M++
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
++AE V + Q G D+ +++ ++S Y++ + +F+ M R G + N +
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+HAL +++ +++ +++ G + + ++ +A + E ++ + M G
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 310 SPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
PTIR Y ++++ G+ V ++ M + + + ++K ++ + +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
V+ I E G PD ++Y LI + + EE + +M+ L +PK D
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL--DPKLD 998
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--- 326
E V V YN+++ ++ K +A++ D M QRG P + +++ ++ +++G
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL+ +R G +P TY L+ SR KV+ ++ + PD +Y A
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I G EA + +ME++ K P+ T
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVT 369
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G Y+T+I + + R+ + + L+ +MR P L T ++L+ + +
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHL--MFCNKDVFPFNTK 173
+ + K K F + + R AE L M N + P
Sbjct: 1014 EQAEQLFEELLS-KGLKLD---RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP-TLA 1068
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ ++++ + + G+ +EAE+V + + + +S +I Y ++++ + + +
Sbjct: 1069 TMHLLMVSYSSS-GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE 1127
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
MK+ G+E D +++ + A + + + + L+K++E+ G
Sbjct: 1128 MKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA+L + A ++++M ++ ++ +C D+ A N F
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
++ A + L++ LCR +++AE ++ +D + ++ ++++G+C +
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV- 438
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA V +M Q+ + +VV+++ + K ++ L +M G+E + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++I+ L K ++ A+ M M+E G+ P+V TY ++I LC++++LD A EML
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFG---LLE---------------SMRKMGC------- 341
+GI PTI TY+ ++ V G LLE S+ K C
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 342 -------------QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
P +TY +LIK + R +E+ E G SSY ALI
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
L K EA + + +M++++L EP D S+N+ +E +A
Sbjct: 679 LLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 6/274 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL ALC ++DA L ++ P + ++ I+++G+C + A ++ EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLF--DEMASPPDVVTYGIMVHGYCTL-SELETAIKLLSEMAARG 315
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + V+++ +I+ + +R+ + M G+ D V+ V+ + + A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ M+++G+A + VTY +LI LC+A +L EA + EM +G+ TY +D
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ E F + M + P TY L + ++ +E+ G +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y +LI+ L G LE+A + ++M E L P+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D VSF ++ C A L ++++ GI + NAV+ L + +A+ L
Sbjct: 197 DPVSFDLLLLCLPSAP-------LLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLF 245
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLDI 322
+ + EK N +YN L+K LC A ++ +A Q FDEM P + TY H + +
Sbjct: 246 QELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTL 298
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E LL M G + Y +I Q + +V ++ +G D +
Sbjct: 299 SEL-ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+T ++ G L A ++ EM+++ L
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGL 386
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 102/248 (41%), Gaps = 7/248 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K + A + +M P + T T+ I C ++ RA +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI---IGALCQSKELDRAHSLLQ 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I + L++ C V+ + L+ K++ P NT ++N ++ +C I
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP-NTTTYNSLMKQYC-I 612
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + ++ M + + + +++ +I + KARN+ + L +M G
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA+I L K + +A L + M ++ + YN I L+ DE++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 306 QRGISPTI 313
+ + +I
Sbjct: 733 EVTLVKSI 740
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
++ AW L +M+ P++ T L I C + AI F+ R
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L++ L + ++ A ++ ++ N ++N ++ G+C I+G ++A V M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC-ILGDPKKAMLVMNNM 451
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
QRG ++V+++ II Y + N LR+ D M+ G + D Y +I K +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ A L M + G+ PN VTY +LI CK KLD A + M + G P ++TY+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 320 LDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + G L + M + G P TY +I + +++N++ E G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y++LI AL GK+EEA + E++ L+P+ T
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 12/360 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K A ++ ++ E P T ++++ +C HD+ A+ F
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMIL---GHCRKHDLDSALQVFN 274
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ LC V +A L M + + +T + II C+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII--ALCD 332
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G +A R++++M +G +V +++ +IS + L + LF +M R G+ +
Sbjct: 333 M-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTV 391
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA+I+ L + R +K A ++ M G +PN+VTYN +IK C +A + M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
LQRG S + TY+ + +G L L+ MR GC+P +Y LI F + +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ F ++NE+ ++G P+ +YTALI + KL+ A MK P +T +L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 21/383 (5%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+M+NK E + + L+S + V + A F + G +T Y+ +I IL
Sbjct: 345 DMKNKGCEPNVYTYTALISGL--CVSGILKVAIGLFHRMSRD-GVFPNTVTYNALINILV 401
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R+ A+ +++ M P++VT + I+ YC + D +A+ + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEM---IKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ + ++ C N A ++ C D + S+ ++ G+C I
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW-----SYTELICGFCKI-SKME 512
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A ++ EM G+C + V+++ +I Y K L L + MKR G + + YN +I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L K A L K M E+G+ PNVVTY ++I LCK A + F++M+++G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY + + + + G EE L + + G P TY+ +I+ + + + F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 368 WNEISENGNGPDRSSYTALIHAL 390
+ + G P +Y LI L
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL 715
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 171/383 (44%), Gaps = 23/383 (6%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
++D ++A F K+ G +T Y T+I L + + A+ LI EM P+
Sbjct: 263 KHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 102 TKQTLLILIRRYCAVHDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
T +I A+ D+G +A F K + + L+S LC ++ A
Sbjct: 322 TCTGPII------ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSC 213
L VFP NT ++N ++N I+ +R + ++ M + G ++V+++
Sbjct: 376 GLFHRMSRDGVFP-NTVTYNALIN----ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + K + + + M + G + YN +I A+ ++ M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---F 330
P+ +Y LI CK K++ A F+EM+ G+ P TY A +D E++
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LLE M++ GC+P TY +LI ++ F ++ + E G P+ +YTA+I L
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
NG A + + +M E+ LP
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLP 633
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 145/356 (40%), Gaps = 53/356 (14%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF------CNKDVFPF------------------------ 170
+ +++ALC+ NV DAE +M + D F +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 171 ------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI------CYDVVSFSCIISCY 218
NT +++ ++NG C+ G EA + EM GI C + C + CY
Sbjct: 278 KEGCEPNTVTYSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
A RLF MK G E + Y A+I L ++K AI L M GV PN
Sbjct: 337 EDA------WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
VTYN+LI L + R++ A + M + G SP I TY+ + I+ ++ ++ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G TY +IK + + ++ + + + G PD SYT LI K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
+E A + EM + L P T L D Y K SL H +SG V
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALID-GYCKDEKLDTATSLLEHMKRSGCRPNV 565
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+SQ G+ + ++S ++ S+ V+ + +M G++ + +YNAVI+AL K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA ++MK + E ++P+ TY S+I C+ LD A Q F++M + G P TY
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + +G E F L+ M G PT T I + + ++++ ++ G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YTALI L ++G L+ A + M + P T
Sbjct: 351 CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 155/385 (40%), Gaps = 34/385 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K+ K ++A+ L +EM P+ VT L I YC + A +
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL---IDGYCKDEKLDTATSLLE 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
KR ++ + L+ L + N AE L + + +FP N ++ +++G C
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP-NVVTYTAMIDGLCKN 613
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS+ A ++ +M ++G +++++S +I + + + LF +++R G+ D
Sbjct: 614 -GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA----- 300
Y +I A V+ A + + M + G P + TY LIK L L + R A
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 301 -------FDEMLQRGIS----------P--TIRTYHAFLDIIRTGE---EVFGLLESMRK 338
+ Q +S P +++ +A + + T E LL SM
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P + Y L+ R R V+ +S G + Y LI AL + +E
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M + P+ +L D
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLID 877
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
I SC+SK + + + D + + G+ Y+A++ L++ + + M +G
Sbjct: 152 IKSCHSK-EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGE 327
V PN++ YN++I LCK + +A ++ + +SP TY H + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+VF M K GC+P TY LI + F + E+ +G P + T I
Sbjct: 271 QVF---NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL G E+A + +++MK K P T
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++S S A + L M G+ D++ YN+++ +L + R V A+ + K M +G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-----E 327
++ Y LI LC+ + EAR F+ ML R +P +D ++R G
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
E ++E+ R M P+ Y +L ++ S+ R
Sbjct: 890 EFLHIMETRRYM---PSFHIYTILAREASKKR 918
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 176/396 (44%), Gaps = 16/396 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV EV+ FF WA ++ Y H T Y +I L V ++
Sbjct: 77 LEVLMMKVDHWLVREVMK-TDVGVSVKMQFFRWAARKRNYEHDTSTYMALIRCLEVVEQY 135
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W +I EM +VT L +IR + +A+ FY K K +
Sbjct: 136 GEMWKMIQEMVRNPV--CVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAY 193
Query: 142 QGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM- 197
++ L Y+ V + + M FP +T +++ +++ +C + R+ +W+
Sbjct: 194 NSMIIMLMHEGEYEKVHELYNEMSNEGQCFP-DTVTYSALISAFCKL---GRQDSAIWLL 249
Query: 198 -EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM G+ ++ +++ K N+H L LF++M+ D Y +I L K
Sbjct: 250 NEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKA 309
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ +A + M +G P+ V N++I L KA +LD+A + F+EM P++ TY
Sbjct: 310 GRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTY 369
Query: 317 HAFLDIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ + + + E+ E M+ G P+ TY +LI F + + + E+
Sbjct: 370 NTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMD 429
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
E G P ++Y +LI AL + + A++ + E+KE
Sbjct: 430 EKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKE 465
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 18/339 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I LGK + D A+ EMR P V ++ + + + D AI F
Sbjct: 299 YTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDD---AIKLFE 355
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKN-VQDA----EHLMFCNKDVFPFNTKSFNIILNGW 182
+ + + + ++ AL K+ V + E + PF +++I+++G+
Sbjct: 356 EMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPF---TYSILIDGF 412
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C + +A + EM ++G ++ +I KA+ LF ++K
Sbjct: 413 CKT-NRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSS 471
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+VY +I L K + DA+ L M G PNV YN+L+ L +A LDEA
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M G P I +Y+ L+ + +TG + G+L +M++ +P +Y ++ S
Sbjct: 532 RMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
F K+ E++ G D +Y++++ A+ GK+++
Sbjct: 592 MFEEAAKLMKEMNAIGFDYDLITYSSILEAI---GKVDQ 627
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 164/392 (41%), Gaps = 45/392 (11%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRG-GETGPSLVTKQTLLILIRRYCAVHDVGRA 122
+ Y++MI +L +++ L +EM G+ P VT L I +C + A
Sbjct: 189 TAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSAL---ISAFCKLGRQDSA 245
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN----- 171
I K + + L++ L + NV A L +C DVF +
Sbjct: 246 IWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRG 305
Query: 172 -------TKSFN--------------IILNGWCNIIGSS---REAERVWMEMSQRGICYD 207
+++N +++N N +G + +A +++ EM
Sbjct: 306 LGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPS 365
Query: 208 VVSFSCIISCY--SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
VV+++ II SK+R + ++ F++MK GI Y+ +I K + A+ L
Sbjct: 366 VVTYNTIIKALFESKSR-VSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMML 424
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-R 324
++ M+EKG P Y SLI L KA++ D A + F E+ + S + R Y + + +
Sbjct: 425 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGK 484
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G ++ L + M ++GC P Y L+ +R + ++G PD +S
Sbjct: 485 AGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINS 544
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y +++AL G + A MK+ + P+
Sbjct: 545 YNIILNALAKTGGPDRAMGMLCNMKQSAIKPD 576
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 160/387 (41%), Gaps = 24/387 (6%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S L+S R D + + L K +G + + Y ++A+L K+ A L +E
Sbjct: 230 SALISAFCKLGRQD---SAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEE 286
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
MR P + T L IR + A N F+ +R +++ L +
Sbjct: 287 MRHQYCRPDVFTYTEL---IRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGK 343
Query: 151 YKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE-RVWME-MSQR 202
+ DA L + C V +NT I+ SR +E W E M
Sbjct: 344 AGRLDDAIKLFEEMETLRCIPSVVTYNT-----IIKALFE--SKSRVSEISSWFERMKGS 396
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
GI ++S +I + K K + L ++M G Y ++I AL K + A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 456
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
L + ++E + + Y +IK L KA +LD+A FDEM + G +P + Y+A +
Sbjct: 457 NELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSG 516
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ R G +E + M+ GC P ++Y +++ ++ + + ++ PD
Sbjct: 517 LARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPD 576
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEM 406
SY ++ AL G EEA + EM
Sbjct: 577 AVSYNTVLGALSHAGMFEEAAKLMKEM 603
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + +C + S II A+ + K + +F Q+K + YN++I L
Sbjct: 144 EMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHE 203
Query: 257 RLVKDAISLMKSMEEKGVA-PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A +EM G+ PT +
Sbjct: 204 GEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKI 263
Query: 316 YHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + ++ + V GL E MR C+P TY LI+ + + + ++E+
Sbjct: 264 YTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMR 323
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD +I+ L G+L++A + + EM+ + +P T
Sbjct: 324 REGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVT 368
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 38/199 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++ + S R Y MI LGK + D A L DEM P++
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNV---------------- 507
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
YAY G+ L AL + +QD C D+ S+N
Sbjct: 508 ----------YAYN--ALMSGLARAGMLDEALTTMRRMQDHG----CIPDI-----NSYN 546
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
IILN G R A + M Q I D VS++ ++ S A + +L +M
Sbjct: 547 IILNALAKTGGPDR-AMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNA 605
Query: 237 MGIECDRKVYNAVIHALAK 255
+G + D Y++++ A+ K
Sbjct: 606 IGFDYDLITYSSILEAIGK 624
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG------EEVFGLL 333
TY +LI+ L + E + EM++ + + T DIIR + +
Sbjct: 121 TYMALIRCLEVVEQYGEMWKMIQEMVRNPV--CVVTPMELSDIIRMLGNAKMISKAVAIF 178
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFL 392
++ CQPT Y +I ++ V +++NE+S G PD +Y+ALI A
Sbjct: 179 YQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCK 238
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+ + A EMK+ + P K +L
Sbjct: 239 LGRQDSAIWLLNEMKDNGMQPTAKIYTML 267
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 175/384 (45%), Gaps = 16/384 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN-AF 126
++ ++ L K + + T +L +M P++ TL ILI C H ++ AF
Sbjct: 72 FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNV---YTLTILIN--CLCHSNRDHVHFAF 126
Query: 127 YAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNG 181
A + F +G++ F LL+ LC + DA L K F + ++ I+ G
Sbjct: 127 SALGKM-FKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C I G + A ++ +M ++G DVV+++ +I K R ++ + F +M GI
Sbjct: 186 LCKI-GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ Y++++H + +A SL K M + V PN VT+ L+ LCK + EAR+ F
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ M + G+ P TY A +D + +E L + M G P+ Y +LI +
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
R+ + +E+ + PD +Y+ L+ G+ + A + + EM LLP+ T
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424
Query: 419 ELLQDWSYNKQFVERQIASLKAHQ 442
+L D ++ LKA Q
Sbjct: 425 SILLDGLCKHGHLDEAFRLLKAMQ 448
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 170/375 (45%), Gaps = 11/375 (2%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A F GK G+A S Y T+I L K+ A L+ +M P +V T+
Sbjct: 160 AVKLFDEIGKM-GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTV- 217
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I C A+ F + + +L C + +A L +
Sbjct: 218 --IDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR 275
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+V P NT +F I+++G C G EA RV+ M++ G+ D ++S ++ Y +
Sbjct: 276 NVMP-NTVTFTILVDGLCKE-GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +LFD M G +VYN +I+ K R + +A +L+ M ++ + P+ VTY++L+
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
+ C+A + A++ F EM G+ P TY LD + + G +E F LL++M++ +
Sbjct: 394 QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIE 453
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P Y +LI+ + + ++++ + G P +YT +I L G EA +
Sbjct: 454 PHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEM 513
Query: 403 YMEMKEKQLLPEPKT 417
+ +M LP T
Sbjct: 514 FRKMVVNGCLPNSCT 528
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 19/396 (4%)
Query: 3 TLVDILREFSHKRSEMR--NKIEECGIKVSSELVSEVLSWVRNDWEA--AFTFFLWAGKQ 58
T++ L + H + ++ K+EE G K + V+ + D A A FF Q
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
G + Y +++ + + + A +L +M G P+ VT IL+ C
Sbjct: 241 -GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT---FTILVDGLCKEGM 296
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFN 176
+ A F + L+ C + +A+ L + K P + + +N
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP-SVRVYN 355
Query: 177 IILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
I++NG C S R EA+ + EM R + D V++S ++ + +A +LF +M
Sbjct: 356 ILINGHCK---SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+ D Y+ ++ L K + +A L+K+M+E + P++ YN LI+ +C KL
Sbjct: 413 CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKL 472
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+ AR+ F + +GI P++ TY + +++ G E + M GC P + TY +
Sbjct: 473 EAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVA 532
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
I+ F R N ++ E+ G D S++ L+
Sbjct: 533 IQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 219 SKARNLHKV---LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
S NLH V + F+Q+ + V+N ++ +L K + ISL K M+ +
Sbjct: 42 SNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIR 101
Query: 276 PNVVTYNSLIKPLCKARK--LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG-- 331
PNV T LI LC + + + A A +M + G+ PT T+ L+ + + ++
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161
Query: 332 -LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L + + KMG P+ TY +IK + N ++ ++ E G PD +Y +I +L
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + EA ++ EM ++ + P T
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVT 248
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 108/277 (38%), Gaps = 40/277 (14%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA F + GK G+A S R Y+ +I K R+ + A L+ EM + P VT T
Sbjct: 334 EAQKLFDIMVGK--GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L+ + +C GR A Q L +C Y + D+
Sbjct: 392 LM---QGFC---QAGRPQVA----------------QKLFKEMCSYGLLPDS-------- 421
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+++I+L+G C G EA R+ M + I + ++ +I L
Sbjct: 422 -------ITYSILLDGLCKH-GHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
LF + GI+ Y +I L K L +A + + M G PN TYN I
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + A + +EM+ RG S T+ LD+
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 174/373 (46%), Gaps = 49/373 (13%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A AL+DE+ PS++T TLL Y + DVG ++ + +
Sbjct: 207 AKALMDELVCKGFKPSVITYNTLL---NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTM 263
Query: 144 LLSALCRYKNVQDAEHLM------FCNKDVFPF--------------------------- 170
L+ R +++AE L DV+ +
Sbjct: 264 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 323
Query: 171 ---NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ ++NG C G + AE + +M +G+ + V F+ ++ Y K + +
Sbjct: 324 LVPNAYTYGALINGACKA-GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 382
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
LRL + M++ G E D N + + ++A L+ +MEE+GVAPNVV+++ LI
Sbjct: 383 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 442
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
CK + EAR+ F M ++G +P++ TY+AF++ + G EE + L+ M++ G P
Sbjct: 443 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 502
Query: 345 NDTYIMLIKKFSRWRQFGNV---FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
TY LI R GNV +++NE+ + G + +YT +I L +G+ +EA +
Sbjct: 503 TYTYTSLIDG---ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 559
Query: 402 YYMEMKEKQLLPE 414
Y EM ++ ++P+
Sbjct: 560 LYDEMNKEGIVPD 572
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 10/339 (2%)
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
++ Y +I + K + A L DEM P + ++ I C ++ RA
Sbjct: 256 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI---INWNCKFGNMKRA 312
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
F + + L++ C+ ++ AE ++ +K V N FN +++
Sbjct: 313 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV-DVNRVIFNTLMD 371
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G+C G EA R+ M Q+G D + + I S + ++ + RL M+ G+
Sbjct: 372 GYCKK-GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 430
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ ++ +I K + +A L K ME+KG AP+VVTYN+ I+ CK K++EA +
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+EM +RG+ P TY + +D R V L M ++G TY ++I S+
Sbjct: 491 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 550
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ FK+++E+++ G PD Y++LI +L G L
Sbjct: 551 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 157/354 (44%), Gaps = 49/354 (13%)
Query: 143 GLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNIILNGWCNI--IGSSREAERVWM 197
++ LC+ V A+ LM C F + ++N +LNG+ I +G E +
Sbjct: 193 AVVDGLCKKGEVVRAKALMDELVCKG--FKPSVITYNTLLNGYIEIKDVGGVNE---ILS 247
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M + + Y+V +++ +I YS++ + + +LFD+M + GIE D +Y ++I+ K
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K A L M E+ + PN TY +LI CKA ++ A ++M +G+ ++
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 318 AFLD-------------------------------IIRTG-------EEVFGLLESMRKM 339
+D II +G EE LL +M +
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 427
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P ++ +LI + + + F +++ + + G P +Y A I GK+EEA
Sbjct: 428 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 487
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
++ EM+E+ L+P+ T L D V+R + L PQ G N V++
Sbjct: 488 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL-ELFNEMPQLGLNRNVVT 540
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 42/231 (18%)
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWM 197
F L+ C+ + +A L + F + + NII +G+C S+R EA+R+ +
Sbjct: 366 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCR---SNRREEAKRLLL 422
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M +RG+ +VVSFS +I Y K +N + RLF M++ G YNA I K
Sbjct: 423 TMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 482
Query: 258 LVKDAISLMKSMEEKGVAP-----------------------------------NVVTYN 282
+++A L+ M+E+G+ P NVVTY
Sbjct: 483 KMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYT 542
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGL 332
+I L K + DEA + +DEM + GI P Y + + + + G V GL
Sbjct: 543 VIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL 593
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y R L +FD ++ G E D + + AL + ++ + ++ M + G+
Sbjct: 128 YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 187
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLE 334
V ++ +++ LCK ++ A+ DE++ +G P++ TY+ L+ ++V G +L
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M K TY MLI+ +SR + K+++E+ + G PD YT++I+ G
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT 417
++ A + EM E++L+P T
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYT 330
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI V S++ ++ K + + L D++ G + YN +++ + +
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V ++ ME+ V NV TY LI+ ++ K++EA + FDEML++GI P + Y
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 318 AFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ ++ + F L + M + P TY LI + + + N++
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 357
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
G +R + L+ G ++EA + M++K
Sbjct: 358 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 392
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 194/432 (44%), Gaps = 31/432 (7%)
Query: 29 VSSELVSEVLSWVRNDWE-----AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
V S L S +L+ V + ++ FF W + HS + TMI L K ++F T
Sbjct: 34 VGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKT 93
Query: 84 AWALIDEM--RGGETGPSLVT------------KQTLLILIRRYCAVHDVGRAINAFYAY 129
A L++ + R + PS++ Q L L+ Y AI F
Sbjct: 94 AQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHM 153
Query: 130 KRFKFAVGIEDFQGLLSALC--RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ F + LL++L R N+ + V P N FN++++ C G
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVP-NIHIFNVLIHACCKS-G 211
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+AE++ EM R I D+ +++ +IS Y K ++ L + D+M+R G+ D YN
Sbjct: 212 DVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYN 271
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I+ + +++A+ L + E G PN VTY +LI C+ L+EA + + M
Sbjct: 272 SLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVE 329
Query: 308 GISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ P + TY++ L + G+ + LL M + +P N T LI + + G+
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
KV ++ E G PD+ ++ ALIH +++ A ++ EM + P T L D
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS 449
Query: 425 SY---NKQFVER 433
Y NK+ V R
Sbjct: 450 YYDQDNKEAVIR 461
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 8/356 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + ++ +I K + A L++EM P L T TL+ L YC
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL---YCKKGMH 248
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A+ +R + I + L+ CR +++A L P N ++ ++
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP-NHVTYTTLI 307
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C + EA R+ M G+ VV+++ I+ + + RL ++M +
Sbjct: 308 DGYCRV-NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D N +I+A K + A+ + K M E G+ P+ T+ +LI CK ++D A++
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 300 AFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
EML G SP+ TY +D E V L + + + G Y LI++
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + +++ + G D YT+L +A F GK A EM +++L+
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM 542
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 42/299 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I + + A L E+ G P+ VT TL I YC V
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTL---IDGYCRV 313
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+D+ A+ + G+ + +L LC ++DA L+ + V P N +
Sbjct: 314 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNV-T 372
Query: 175 FNIILNGWCNI--IGSSRE--------------------------------AERVWMEMS 200
N ++N +C I +GS+ + A+ EM
Sbjct: 373 CNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
G ++S ++ Y N V+RL D++ R G+ D VY A+I L K ++
Sbjct: 433 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A + M+ KG+ + V Y SL KA K A DEM +R + T++ Y F
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCF 551
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 182/436 (41%), Gaps = 34/436 (7%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND----WEAAFTFFLWAGKQSGYAH--- 63
F H S R IE G + ++V +L ++ D E F + K+ G A
Sbjct: 70 FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129
Query: 64 -------------STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
+ R Y+ ++ L KF L M+ P++ T IL+
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN---ILL 186
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
+ C V A F + ++S+LC+ + DA L K P
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPV 246
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+N +++G C G A ++ EM G+ +VVS+SCII+ + N+ L
Sbjct: 247 ----YNALIDGMCKE-GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301
Query: 231 FDQMKRMGIECDRKVYNAVIHA-LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F QM G + + + +I +G+L +A+ L K M + G PNVV YN+LI LC
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLY-EALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTND 346
L+EA Q D+M + G P + TY +D ++ G E+ +M GC+P
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++ + F + +++ G P+ ++ I L NG++E A + M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 407 KEKQLLPEPKT-DELL 421
+ LP T +ELL
Sbjct: 481 QGHGCLPNITTYNELL 496
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 8/345 (2%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ S Y+ +I + K + + A L+ EM P++V+ + I C +V
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI---INSLCVSGNVE 296
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIIL 179
A F I F L+ + +A L +D N ++N ++
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C+ GS EA +V +M + G +V ++S +I ++K+ +L +++M G
Sbjct: 357 HGLCSN-GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y ++ L K + A SL++ M +G PN +T+N+ IK LC +++ A +
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475
Query: 300 AFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+ M G P I TY+ LD + EE FGL + + QP TY ++ FS
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
R G +++ + G PD +Y +IHA GK++ A Q
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 178/431 (41%), Gaps = 33/431 (7%)
Query: 39 SWVRND-WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
+ +ND +AA F+ + G Y TM++ L K K D A L G
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNK-GCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFK 241
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
PS+ L I C + AI + + ++++LC NV+ A
Sbjct: 242 PSVPVYNAL---IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 158 EHL---MF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
L MF C+ N +F ++ G C + G EA +W M Q G +VV++
Sbjct: 299 FALFAQMFLRGCDA-----NIHTFTPLIKG-CFMRGKLYEALDLWKLMIQDGCEPNVVAY 352
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I +L + L++ DQM+R G + Y+ +I AK + A M
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV-- 329
G PNVVTY ++ LCK D+A ++M G +P T++ F+ + V
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472
Query: 330 -FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
LLE M+ GC P TY L+ R ++ F ++ EI P+ +Y +++
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWS------YNKQFVERQIASLKAH 441
G + EA Q + + + P+ T + ++ + Q VER ++S+K
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER-VSSMKEW 591
Query: 442 QPQSGQNTRVI 452
P T +I
Sbjct: 592 HPDIITYTSLI 602
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 152/394 (38%), Gaps = 48/394 (12%)
Query: 35 SEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
S+VL ++ D + FF + + H+ Y MI LG+ + D ++ +M+
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
+ + +I Y V +A+ FY F + + LL AL
Sbjct: 102 MDGIN---CCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL---- 154
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ F +I ++ M + G+ +V +++
Sbjct: 155 -----------------LSENKFQMI--------------NPLYTNMKKDGLIPNVFTYN 183
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ K + +LF +M G D Y ++ +L K + DA L +
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV--- 329
P+V YN+LI +CK +++ A + EM+ G+ P + +Y ++ + V
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC T+ LIK + +W + ++G P+ +Y LIH
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L NG LEEA Q +M+ LP T +L D
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 127/310 (40%), Gaps = 23/310 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+T+I L + A + D+M+ P++ T ILI +
Sbjct: 342 QDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYS---ILIDGFAKSG 398
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A + + + ++ LC+ A L+ + P NT +F
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP-NTITF 457
Query: 176 NIILNGWCNIIGSSRE--AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N + G C G+ R A ++ M G ++ +++ ++ + + LF +
Sbjct: 458 NTFIKGLC---GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++ ++ + YN V++ ++ ++ +A+ L +G AP+ +TYN++I CK K
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 294 LDEARQAFDEMLQ-RGISPTIRTYHAF-------LDIIRTGEEVFGLLESMRKMGCQPTN 345
+ A Q + + + P I TY + ++I EE L+ G P
Sbjct: 575 VKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI----EEAMAFLDKAINQGICPNF 630
Query: 346 DTYIMLIKKF 355
T+ L++ F
Sbjct: 631 ATWNALVRCF 640
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
++ AW L +M+ P++ T L I C + AI F+ R
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ L++ L + ++ A ++ ++ N ++N ++ G+C I+G ++A V M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC-ILGDPKKAMLVMNNM 451
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
QRG ++V+++ II Y + N LR+ D M+ G + D Y +I K +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ A L M + G+ PN VTY +LI CK KLD A + M + G P ++TY+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Query: 320 LDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + G L + M + G P TY +I + +++N++ E G
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y++LI AL GK+EEA + E++ L+P+ T
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 12/360 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K A ++ ++ E P T ++++ +C HD+ A+ F
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMIL---GHCRKHDLDSALQVFN 274
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ LC V +A L M + + +T + II C+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII--ALCD 332
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G +A R++++M +G +V +++ +IS + L + LF +M R G+ +
Sbjct: 333 M-GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA+I+ L + R +K A ++ M G +PN+VTYN +IK C +A + M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
LQRG S + TY+ + +G L L+ MR GC+P +Y LI F + +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ F ++NE+ ++G P+ +YTALI + KL+ A MK P +T +L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 21/383 (5%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+M+NK E + + L+S + V + A F + G +T Y+ +I IL
Sbjct: 345 DMKNKGCEPNVYTYTALISGL--CVSGLLKVAIGLFHRMSRD-GVFPNTVTYNALINILV 401
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R+ A+ +++ M P++VT + I+ YC + D +A+ + +
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEM---IKGYCILGDPKKAMLVMNNMLQRGHSA 458
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ + ++ C N A ++ C D + S+ ++ G+C I
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW-----SYTELICGFCKI-SKME 512
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A ++ EM G+C + V+++ +I Y K L L + MKR G + + YN +I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L K A L K M E+G+ PNVVTY ++I LCK A + F++M+++G
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY + + + + G EE L + + G P TY+ +I+ + + + F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692
Query: 368 WNEISENGNGPDRSSYTALIHAL 390
+ + G P +Y LI L
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGL 715
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 171/383 (44%), Gaps = 23/383 (6%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
++D ++A F K+ G +T Y T+I L + + A+ LI EM P+
Sbjct: 263 KHDLDSALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 102 TKQTLLILIRRYCAVHDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
T +I A+ D+G +A F K + + L+S LC ++ A
Sbjct: 322 TCTGPII------ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSC 213
L VFP NT ++N ++N I+ +R + ++ M + G ++V+++
Sbjct: 376 GLFHRMSRDGVFP-NTVTYNALIN----ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + K + + + M + G + YN +I A+ ++ M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---F 330
P+ +Y LI CK K++ A F+EM+ G+ P TY A +D E++
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LLE M++ GC+P TY +LI ++ F ++ + E G P+ +YTA+I L
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
NG A + + +M E+ LP
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLP 633
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 145/356 (40%), Gaps = 53/356 (14%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF------CNKDVFPF------------------------ 170
+ +++ALC+ NV DAE +M + D F +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 171 ------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI------CYDVVSFSCIISCY 218
NT +++ ++NG C+ G EA + EM GI C + C + CY
Sbjct: 278 KEGCEPNTVTYSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
A RLF MK G E + Y A+I L L+K AI L M GV PN
Sbjct: 337 EDA------WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
VTYN+LI L + R++ A + M + G SP I TY+ + I+ ++ ++ +
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G TY +IK + + ++ + + + G PD SYT LI K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
+E A + EM + L P T L D Y K SL H +SG V
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALID-GYCKDEKLDTATSLLEHMKRSGCRPNV 565
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+SQ G+ + ++S ++ S+ V+ + +M G++ + +YNAVI+AL K
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA ++MK + E ++P+ TY S+I C+ LD A Q F++M + G P TY
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + +G E F L+ M G PT T I + + ++++ ++ G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YTALI L ++G L+ A + M + P T
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 155/385 (40%), Gaps = 34/385 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K+ K ++A+ L +EM P+ VT L I YC + A +
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL---IDGYCKDEKLDTATSLLE 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
KR ++ + L+ L + N AE L + + +FP N ++ +++G C
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP-NVVTYTAMIDGLCKN 613
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
GS+ A ++ +M ++G +++++S +I + + + LF +++R G+ D
Sbjct: 614 -GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA----- 300
Y +I A V+ A + + M + G P + TY LIK L L + R A
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 301 -------FDEMLQRGIS----------P--TIRTYHAFLDIIRTGE---EVFGLLESMRK 338
+ Q +S P +++ +A + + T E LL SM
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P + Y L+ R R V+ +S G + Y LI AL + +E
Sbjct: 793 QGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKE 852
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQD 423
A + M + P+ +L D
Sbjct: 853 ARITFENMLMRTWNPDDVVQAVLID 877
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
I SC+SK + + + D + + G+ Y+A++ L++ + + M +G
Sbjct: 152 IKSCHSK-EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGE 327
V PN++ YN++I LCK + +A ++ + +SP TY H + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+VF M K GC+P TY LI + F + E+ +G P + T I
Sbjct: 271 QVF---NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
AL G E+A + +++MK K P T
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++S S A + L M G+ D++ YN+++ +L + R V A+ + K M +G
Sbjct: 770 LVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-----E 327
++ Y LI LC+ + EAR F+ ML R +P +D ++R G
Sbjct: 830 CEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCM 889
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
E ++E+ R M P+ Y +L ++ S+ R
Sbjct: 890 EFLHIMETRRYM---PSFHIYTILAREASKKR 918
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 10/252 (3%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N ++ G+C G A ++ EM +RG DVV+ S I+ NL + ++
Sbjct: 104 NHITYNTLIGGFCKA-GDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQY 162
Query: 231 FDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
F R +EC D ++N ++H L K + +A +++ M E+G+ P+VVTYNSLI L
Sbjct: 163 F----RESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTN 345
CK+ +++EARQ + M++R + P + TY+ + +TG L+E M + G P
Sbjct: 219 CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDV 278
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
T+ LI F + + +V + + + P+ +Y LI L G+ EA + E
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 406 MKEKQLLPEPKT 417
M + +LP+ T
Sbjct: 339 MDGRGILPDIIT 350
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 12/386 (3%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGK--QSGYAHSTREYHTMIAILGKVRKFDTAWALI-DE 90
V VL ++ D + + FF W + + H+ + ++ L K R+ A+ + DE
Sbjct: 37 VGRVLQVIK-DVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDE 95
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
+ G + +T TL I +C D+ RA K + + ++ ALC
Sbjct: 96 LLGQHCDTNHITYNTL---IGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCN 152
Query: 151 YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
N+ A + + P ++ FNI+++G C S EA ++ EMS+RGI DVV+
Sbjct: 153 TGNLSRAMQYFRESVECAP-DSVLFNILVHGLCKANQLS-EARQMIEEMSERGIVPDVVT 210
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +I K+ + + +L + M + + + YN +I+ K A L++ M
Sbjct: 211 YNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMI 270
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--E 327
+ G P+VVT+NSLI C+ K+D+A + M + +P + TY+ + + G
Sbjct: 271 QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRAN 330
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E LL M G P TY LI F R Q F++ N + E G PD SY L
Sbjct: 331 EACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLA 390
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
AL + + +EA M + +P
Sbjct: 391 VALLKSERFDEAFALLDNMFDAGAIP 416
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 151/347 (43%), Gaps = 37/347 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G Y+++I L K + + A L++ M + P+LVT TL I YC
Sbjct: 201 ERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTL---IYGYCKTG 257
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFN 176
G A + + F L+S C+ + A E L K + N ++N
Sbjct: 258 CTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYN 317
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++++G C+ G + EA + EM RGI D+++++ +I + + + + ++ + M
Sbjct: 318 VLISGLCDA-GRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVE 376
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D Y + AL K +A +L+ +M + G PN+ T+NSL++ LC +R+LDE
Sbjct: 377 RGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDE 436
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
AR LL MR++GC P TY +L+
Sbjct: 437 ARH--------------------------------LLAVMRRVGCDPAASTYEVLVTGLC 464
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ + + +V + G P SS ++H L GK + A Y+
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYF 511
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 7/217 (3%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMK 267
++++ +I + KA ++ + +L +MK G D +++++ AL G L + +
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG- 326
S+E AP+ V +N L+ LCKA +L EARQ +EM +RGI P + TY++ +D +
Sbjct: 166 SVE---CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSY 222
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE LLE+M K +P TY LI + + G ++ + ++G PD ++
Sbjct: 223 RMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFN 282
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+LI K+++A + MK+ P T +L
Sbjct: 283 SLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 277 NVVTYNSLIKPLCKARKLDEARQAF-DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
N T N L++ L KAR+ +A Q F DE+L + TY+ + + G E F L
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L M++ G P T+ +++ + + E E PD + L+H L
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCK 185
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+L EA Q EM E+ ++P+ T L D
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLID 216
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 17/351 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ M+ + + KF A L+D MR P L++ T LI R A+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNT-LINARLKSGGLTPNLAVELLD 286
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
+ + LLSA R N+ A + C D++ +N I + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM---ISVYG 343
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G + EAER++ME+ +G D V+++ ++ +++ RN KV ++ QM++MG
Sbjct: 344 RC---GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEE-KGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YN +IH K + A+ L K M+ G P+ +TY LI L KA + EA
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
EML GI PT++TY A + + G EE M + G +P N Y +++ R
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ + ++ ++ +G+ P + Y +I L + ++ + +M+E
Sbjct: 521 GNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+S NI+L+ C + G E V E+ G S ++ +++A N+ +V ++
Sbjct: 821 TVESINILLHALC-VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ MK G ++Y +I L KG+ V+DA ++ MEE + +NS++K
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
+ Q + + + G+ P TY+ + + R EE + L++ MR +G P DT
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI F + + +++ E+ G DRS Y ++ +G +A + MK
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 408 EKQLLPEPKTDELLQ---DWSYNKQFVERQIASLK 439
+ P T LL S N Q E+ +++LK
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 160/362 (44%), Gaps = 8/362 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+QSG + ++++++ + ++ A A+ + M GPS T +++ IL+ C
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM--RDGPS-PTVESINILLHALCVD 835
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNT-KSF 175
+ + F + +L A R N+ + + + K T + +
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ C R+AE + EM + ++ ++ ++ Y+ + K ++++ ++K
Sbjct: 896 RMMIELLCKG-KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D YN +I + R ++ LM+ M G+ P + TY SLI K + L+
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLI 352
+A Q F+E+L +G+ YH + I R + + LL+ M+ G +PT T +L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+S KV + + + Y+++I A + + +EMK++ L
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 413 PE 414
P+
Sbjct: 1135 PD 1136
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL--RLFDQMKRMGIECDRK 244
G +A+ + M QRG D++SF+ +I+ K+ L L L D ++ G+ D
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN ++ A ++ + A+ + + ME P++ TYN++I + EA + F E+
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 305 LQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+G P TY++ L R E+V + + M+KMG TY +I + + Q
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 362 GNVFKVWNEISE-NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+++ ++ +G PD +YT LI +L + EA EM + + P +T
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 132/349 (37%), Gaps = 57/349 (16%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ L E+L VRN SG Y+T+++ + D A +
Sbjct: 276 LTPNLAVELLDMVRN---------------SGLRPDAITYNTLLSACSRDSNLDGAVKVF 320
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
++M P L T ++ + R + R F AV + LL A
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV---TYNSLLYAF 377
Query: 149 CRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
R +N + + + V+ +M + G D
Sbjct: 378 ARERNTE-----------------------------------KVKEVYQQMQKMGFGKDE 402
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ II Y K L L+L+ MK + G D Y +I +L K +A +LM
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M + G+ P + TY++LI KA K +EA F ML+ G P Y LD++ G
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 328 EV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
E +GL M G P+ Y ++I + + ++ K ++ E
Sbjct: 523 ETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFD 232
SFN ++N G + ++M + G+ D ++++ ++S S+ NL +++F+
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M+ + D YNA+I + L +A L +E KG P+ VTYNSL+ + R
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTY 348
++ ++ + +M + G TY+ + + ++ L+ + M G P TY
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI + + + +E+ + G P +Y+ALI GK EEA + M
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 409 KQLLPE 414
P+
Sbjct: 502 SGTKPD 507
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y +I A K +L + A S++ ++ + G P++ T+NSL+ + + AR F+ M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 305 LQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ G SPT+ + + L + EE++ ++E ++ MG + + + ++++ F+R
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
V K+++ + G P Y +I L ++ +A EM+E
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE--ARQAF 301
+VYNA++ ++ A L+ +M ++G P+++++N+LI K+ L A +
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRW 358
D + G+ P TY+ L + G + E M CQP TY +I + R
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+++ E+ G PD +Y +L++A E+ + Y +M++
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
++AE V + Q G D+ +++ ++S Y++ + +F+ M R G + N +
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+HAL +++ +++ +++ G + + ++ +A + E ++ + M G
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 310 SPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
PTIR Y ++++ G+ V ++ M + + + ++K ++ + +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
V+ I E G PD ++Y LI + + EE + +M+ L +PK D
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL--DPKLD 998
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--- 326
E V V YN+++ ++ K +A++ D M QRG P + +++ ++ +++G
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL+ +R G +P TY L+ SR KV+ ++ + PD +Y A
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I G EA + +ME++ K P+ T
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVT 369
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G Y+T+I + + R+ + + L+ +MR P L T ++L+ + +
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHL--MFCNKDVFPFNTK 173
+ + K K F + + R AE L M N + P
Sbjct: 1014 EQAEQLFEELLS-KGLKLD---RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP-TLA 1068
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ ++++ + + G+ +EAE+V + + + +S +I Y ++++ + + +
Sbjct: 1069 TMHLLMVSYSSS-GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE 1127
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
MK+ G+E D +++ + A + + + + L+K++E+ G
Sbjct: 1128 MKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 8/353 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y+++I L K + D A L + M+ E PS+VT TLL + R
Sbjct: 2 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR---T 58
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ RA+ A + + + + F L++ LCR ++ A D N +++
Sbjct: 59 GKLERAM-ALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYS 117
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++++G C S+ E + M RG DV++++ ++ K + + +M
Sbjct: 118 VLIDGLCKANRVSQAVE-LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + YN+++H L + R V DA++LM+ M +G PNVVTY +LI LCK ++ +
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 236
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIK 353
A +M+ +G +P + Y+ ++ + ++V LL G +P TY +I
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
R + ++ + G PD Y+ LI L GK++EA Y M
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 11/360 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K + A L++ M+ P ++T IL+ C V A
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT---ILVDGLCKESKVAAAWEVLR 172
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + LL LCR + V DA LM + P N ++ +++G C +
Sbjct: 173 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-NVVTYGTLIDGLCKV 231
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G ++A + +M +G D++ ++ +I+ KA + + + L + GI+ D
Sbjct: 232 -GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y++VI+ L + + +A L+ ++ +G P+V+ Y++LI LCKA K+DEA ++ M
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
G + TY +D + + G +E LL M +MG P+ TY LIK
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH-QYYMEMKEKQLLPEPKTDELL 421
++ E+ + P +Y LIH + +++ A Y+ EM + ++P+ T +L
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 138/350 (39%), Gaps = 44/350 (12%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + K G + Y ++ L K K AW ++ EM P+LVT +LL
Sbjct: 135 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL---H 191
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C V A+ + + L+ LC+ V+DA ++ +K P
Sbjct: 192 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 251
Query: 170 FNTKSFNIILNGWCN-----------------------------IIGSSR-----EAERV 195
+ +N+++NG C I G R EA R+
Sbjct: 252 -DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 310
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ + RG DV+ +S +I KA + + L++ M G + D Y+ +I L K
Sbjct: 311 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCK 370
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
V +A L+ M G P+ +TYNSLIK LC LDEA + +EM + +P+ T
Sbjct: 371 AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 430
Query: 316 Y----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
Y H + R + M G P + TY +L++ + +
Sbjct: 431 YNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKG 256
M G +VV+++ +I K + LF+ MK +EC + YN ++ L +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK--SVECSPSMVTYNTLLDGLFRT 58
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++ A++L + M ++ + +V+++N L+ LC+A K++ A + F +M R SP + TY
Sbjct: 59 GKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITY 116
Query: 317 HAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+D + V LLESM+ GC P TY +L+ + + ++V E+ +
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G P+ +Y +L+H L ++ +A +M + P T
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 220
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 8/199 (4%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
N + A L+ K G Y T+I L K K D A+ L + M G +VT
Sbjct: 302 NRLDEACRLLLYV-KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM- 161
TL I C V A R + L+ LC ++ +A L+
Sbjct: 361 YSTL---IDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417
Query: 162 -FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ P + ++NI+++G C + A + EM G+ D +++S ++ K
Sbjct: 418 EMERSNCAP-SAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKK 476
Query: 221 ARNLHKVLRL-FDQMKRMG 238
+++LH++ L DQM ++G
Sbjct: 477 SKDLHELRHLVLDQMVQLG 495
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 18/359 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I K+ A L+ + P VT +L I CA DV RA+ F
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL---INGLCAEGDVERALELFN 349
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
+ I + L+ LC + A +M C+ D+ +++NI++NG
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI-----QTYNIVING 404
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + G+ +A V + +G DV +F+ +I Y K L L+L ++M GI
Sbjct: 405 LCKM-GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN+V++ L K V + + M KG PN +TYN LI+ C++ K++EA +
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+M Q G+ P +++ + R G E + L + + + G T DT+ LI FS
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+++E+ G+ D +Y LI ++ A+ + +EM +K +P T
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 642
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 43/342 (12%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I IR C + A+ + + + + L+ LC+ Q+A H + N+
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + ++N I++G+C I +EA + + +G D V++ +I+ ++
Sbjct: 285 GCLP-DDFTYNTIIDGYCKI-SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L LF++ + GI+ D VYN+++ L L+ A+ +M M E+G P++ TYN +I
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402
Query: 286 KPLCKAR-----------------------------------KLDEARQAFDEMLQRGIS 310
LCK KLD A Q + M + GI+
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY++ L+ + +V + E+ ++M GC P TY +LI+ F R + KV
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++S+ G PD S+ LI+ NG LE A+ + +++EK
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 15/361 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L D A + M P L T I +R +C A+
Sbjct: 88 YNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL---HTHTIRLRSFCLTARPHIALRLLR 144
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A G + ++ L + + DA L + VFP N +FN +L+ C
Sbjct: 145 ALPHR----GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLAAFNKVLHALCKR 199
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA + ++ QRG+ ++ +++ I +A L + +RL D M+ + D
Sbjct: 200 -GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVT 257
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I L K + ++A+ ++ M +G P+ TYN++I CK + EA + + +
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 317
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G P TY + ++ + G E L + G +P Y L+K
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ +V NE++E G PD +Y +I+ L G + +A + K LP+ T L
Sbjct: 378 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 423 D 423
D
Sbjct: 438 D 438
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL--CRYKNVQDAEHLMFCNKDV 167
IR Y + A++AF F + ++ AL Y + ++ V
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + + I L +C + A R+ + RG V++ ++ + H
Sbjct: 117 SP-DLHTHTIRLRSFC-LTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDA 170
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+LFDQM + + +N V+HAL K V +A L+ + ++G++ N+ TYN I+
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
LC+A +L EA + D M + P + TY+ + + +E L M GC P
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY +I + + ++ + G PD+ +Y +LI+ L G +E A + +
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
Query: 405 EMKEKQLLPE 414
E + K + P+
Sbjct: 350 EAQAKGIKPD 359
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ +I L K+ A ++++ P + T TL I YC
Sbjct: 388 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL---IDGYCKRL 444
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+ + A + +L+ LC+ V + K P N ++
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP-NPITY 503
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++ +C EA +V ++MSQ G+ D VSF+ +I + + +L LF +++
Sbjct: 504 NILIENFCRS-NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G +N +I A + + A + M KG + TY LI CK +D
Sbjct: 563 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQP 343
A EM+++G P++ T+ ++ + VF G++ M K+G P
Sbjct: 623 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y A I A A+ ++DA+ + M+ P YN+++ L A D+A + + M
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 305 LQRGISPTIRTY 316
L G+SP + T+
Sbjct: 112 LAAGVSPDLHTH 123
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 27/388 (6%)
Query: 35 SEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG 94
S VL + D A FF WA + G+ H++ Y ++ IL R + A A++ E
Sbjct: 102 SRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKE---- 157
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
LI +RR DV + A R G F L SAL +
Sbjct: 158 ------------LICLRRVLPSWDVFDLLWA----TRNVCVPGFGVFDALFSALIELGML 201
Query: 155 QDAEHLMFCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
++A + VFP +S N +L+ + G + + + +M GI V +++
Sbjct: 202 EEASECFLKMRKFRVFP-KPRSCNALLHRLSKV-GRGDLSRKFFKDMGAAGIKRSVFTYN 259
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I K +L LF QMK G D YN++I K L+ + I + + M++
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEV 329
P+V+TYN+LI CK ++ +A + EM G+ P + TY F+D + G +E
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
MR++ P TY LI + K+ EI + G + +YTAL+
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L G+++EA + + M + P +T
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 14/352 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I K A L++E+ ++VT LL C + A F
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL---DGLCEEGRMKEAEEVFR 454
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A A E + L+ + K ++ A+ ++ K + P + + IL G CN
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP-DLLLYGTILWGLCN- 512
Query: 186 IGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
SR EA+ + E+ + GI + V ++ ++ Y K+ + L L ++M +G+
Sbjct: 513 --ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y A+I L K LV++A+ M E G+ PNV Y +L+ LCK + A++ FDE
Sbjct: 571 VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
ML +G+ P Y A +D ++ G +E L + M ++G + Y LI S Q
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 690
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ +E+ G PD Y LI + GK++EA + EM ++ ++
Sbjct: 691 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 166/389 (42%), Gaps = 49/389 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K + A+ + EM+ P++VT T I +C + AI F
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF---IDAFCKEGMLQEAIKFFV 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF----PFNTKSFNIILNGWC 183
+R + L+ A C+ N+ +A L+ +++ N ++ +L+G C
Sbjct: 385 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV---EEILQAGIKLNVVTYTALLDGLC 441
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +EAE V+ M G+ + +++ ++ + KA+ + + +MK I+ D
Sbjct: 442 EE-GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+Y ++ L +++A L+ ++E G+ N V Y +L+ K+ + EA +E
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
ML G+ T TY A +D + ++G +E M ++G QP Y L+ +
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620
Query: 361 FGNVFKVWNEISENGNGPDR-----------------------------------SSYTA 385
F K+++E+ + G PD+ +YTA
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
LI L +G++++A EM K +LP+
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPD 709
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 19/306 (6%)
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+A A + F++A G FQ A C H++FC + F + + ++ C
Sbjct: 111 DARLALRFFEWAKGRIGFQHTSEAYCILV------HILFCAR----FYSDANAVLKELIC 160
Query: 184 --NIIGSSREAERVWMEMSQRGICYDVVS-FSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
++ S + +W + R +C F + S + L + F +M++ +
Sbjct: 161 LRRVLPSWDVFDLLW---ATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVF 217
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ NA++H L+K + K M G+ +V TYN +I LCK L+ AR
Sbjct: 218 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 277
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F +M + G +P I TY++ +D + +E + E M+ C P TY LI F +
Sbjct: 278 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 337
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + F+ +E+ NG P+ +Y+ I A G L+EA +++++M+ L P T
Sbjct: 338 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 397
Query: 418 DELLQD 423
L D
Sbjct: 398 YTSLID 403
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 179/411 (43%), Gaps = 47/411 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ G ++ Y ++I +L ++ K A EM G P + TL + +C
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL---VDGFCKR 787
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTK 173
D+ A FY + + ++S C+ ++ +A H M C + + P +
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC-RGLEP-DII 845
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F ++NG+C G ++A RV M Q G +VV+++ +I K +L L +
Sbjct: 846 TFTELMNGYCKA-GHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M ++G++ + YN++++ L K +++A+ L+ E G+ + VTY +L+ CK+ +
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVF----------------- 330
+D+A++ EML +G+ PTI T++ ++ ++ GE++
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 331 ---------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + M G +P TY L+K R + ++ E+ G
Sbjct: 1025 LVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
S+Y+ LI F K EA + + +M+ L + + + D Y
Sbjct: 1085 FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKY 1135
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 156/361 (43%), Gaps = 41/361 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y T+I + + D W LI++M+ P+ T +++ L+ R C + +
Sbjct: 699 GYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEA 758
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A F +G QG+L Y + D FC +
Sbjct: 759 EEA---------FSEMIG----QGILPDTIVYTTLVDG----FCKR-------------- 787
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G R A + + EM R I DV++++ IIS + + ++ + +LF +M G+
Sbjct: 788 -------GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D + +++ K +KDA + M + G +PNVVTY +LI LCK LD A +
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 900
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
EM + G+ P I TY++ ++ + ++G EE L+ G TY L+ +
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + ++ E+ G P ++ L++ L+G LE+ + M K + P
Sbjct: 961 KSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020
Query: 417 T 417
T
Sbjct: 1021 T 1021
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 143/321 (44%), Gaps = 7/321 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C + + A + + + + + +++ CR+ + L+ K
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N+ ++ I+ C I + EAE + EM +GI D + ++ ++ + K ++
Sbjct: 734 GLKP-NSYTYGSIIGLLCRICKLA-EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ F +M I D Y A+I + + +A L M +G+ P+++T+ L+
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
CKA + +A + + M+Q G SP + TY +D + + G+ LL M K+G Q
Sbjct: 852 NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY ++ + K+ E G D +YT L+ A +G++++A +
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
EM K L P T +L +
Sbjct: 972 LTEMLGKGLQPTIVTFNVLMN 992
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 38/257 (14%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ E + G+C++V S++ +I + +++ L M+ G D Y+ VI+
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+ + L++ M++KG+ PN TY S+I LC+ KL EA +AF EM+ +GI P
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 315 TYHAFLD------IIRTGEEVF--------------------------------GLLESM 336
Y +D IR + F L M
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P T+ L+ + + + F+V N + + G P+ +YT LI L G L
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 397 EEAHQYYMEMKEKQLLP 413
+ A++ EM + L P
Sbjct: 896 DSANELLHEMWKIGLQP 912
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG-RLVKDAISLMKSMEEKGVAPNVVTYN 282
L + ++F++M G+ N + L+K AI + + E GV NV +YN
Sbjct: 614 LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKM 339
+I +C+ +++EA M +G +P + +Y ++ R GE +V+ L+E M++
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P + TY +I R + + ++E+ G PD YT L+ G + A
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793
Query: 400 HQYYMEMKEKQLLPE 414
+++ EM + + P+
Sbjct: 794 SKFFYEMHSRDITPD 808
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 7/241 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ L K + A L+ E VT TL+ YC ++ +A
Sbjct: 917 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM---DAYCKSGEMDKAQEILT 973
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I F L++ C + ++D E L+ K + P N +FN ++ +C I
Sbjct: 974 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNCLVKQYC-I 1031
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + A ++ +M RG+ D ++ ++ + ARN+ + LF +MK G
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVST 1091
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ +I K + +A + M G+A + ++ K ++ D DE++
Sbjct: 1092 YSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 1151
Query: 306 Q 306
+
Sbjct: 1152 E 1152
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 173/403 (42%), Gaps = 30/403 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A++ F+ + F L++ LCR + +A
Sbjct: 147 PDVVTFTTLL---HGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D ++ I++G C G + A + +M + I +VV +S II
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKK-GDTVSALNLLRKMEEVSHIIPNVVIYSAII 262
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ GI D YN++I DA L++ M E+ ++
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVTYN+LI K K EA + +DEML RGI P TY + +D + E +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 383 FYL---MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
+L G L A EM L P+ T D LL N + +++ L
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A P +G Q ++ + +FL+ E + H+G
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM---IDGFCKQNRLDAAEHMFY 384
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+ ++
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF-YLV 443
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + EM G+C D+V+ ++ L L +F M++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 624 CGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L + + A AL+D M P+ +T T+ + C D A+N
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI---VDGMCKKGDTVSALNLLR 243
Query: 128 AYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + + ++ +LC+ DA++L K +FP + ++N ++ G+C+
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIVGFCS 302
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +AE++ EM +R I DVV+++ +I+ + K + L+D+M GI +
Sbjct: 303 S-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----- 299
Y+++I K + A + M KG +PN++T+N+LI C A+++D+ +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 300 ---------------------------AFD---EMLQRGISPTIRTYHAFLD------II 323
A D EM+ G+ P I T LD +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 324 RTGEEVFGLLESMRK--------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+F +++ +K G +P TY +LI +F +++ E+ G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y+++I L +L+EA Q + M K P T
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 182 WCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+C ++G ER ++ +M ++ I D+ SF+ +I C+ L L F ++
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
++G+ D + ++H L V +A+ M E PNVVT+ +L+ LC+ ++
Sbjct: 142 KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----GCQPTNDTYIML 351
EA D M++ G+ PT TY +D + + L +RKM P Y +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + ++ E+ E G PD +Y ++I +G+ +A Q EM E+++
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 412 LPEPKT-DELLQDWSYNKQFVERQ 434
P+ T + L+ + +F E +
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAE 345
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 23/303 (7%)
Query: 42 RNDWEAA-FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+N +AA F+L A K G + + ++T+I ++ D L+ EM ETG L
Sbjct: 373 QNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT--ETG--L 426
Query: 101 VTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V T LI + V D+ A++ I LL LC ++DA
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 160 LMF-----CNKDV---FPFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
MF KD+ PFN +++NI+++G N G EAE ++ EM RGI
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE-GKFLEAEELYEEMPHRGIVP 544
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D +++S +I K L + ++FD M + + +I+ K V D + L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M +G+ N +TY +LI K ++ A F EM+ G+ P T L + +
Sbjct: 605 CEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Query: 327 EEV 329
EE+
Sbjct: 665 EEL 667
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV F ++ + V+ L+ +M+R I CD +N +I + A+S
Sbjct: 79 VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFG 138
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G+ P+VVT+ +L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QPT TY ++ + + + ++ E + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I +L +G+ +A + EM+EK + P+
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTY 348
+ L++A F +ML+ P++ + + ++ E V L + M + + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LIK F + + +I++ G PD ++T L+H L + ++ EA ++ +M E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 409 KQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRV 451
P T L + + + +A L Q T++
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 173/393 (44%), Gaps = 46/393 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H Y+ +I L + +F A +++ +M P +VT +L I +C + V
Sbjct: 40 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL---INGFCQGNRV 96
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
AI+ + F + + ++ C+ V DA L +D + ++N +
Sbjct: 97 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 156
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G C G +A R+ +M R I +V++F+ +I + K + ++L+++M R
Sbjct: 157 VAGLC-CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ D YN++I+ L V +A ++ M KG P+VVTYN+LI CK++++DE
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275
Query: 299 QAFDEMLQRGI--------------------------------SPTIRTYHAFLDIIRTG 326
+ F EM QRG+ P IRTY L +
Sbjct: 276 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 335
Query: 327 ---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN---EISENGNGPDR 380
E+ L E+M+K + TY ++I + GNV W+ +S G PD
Sbjct: 336 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCK---IGNVEDAWDLFRSLSCKGLKPDV 392
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SYT +I + +++ Y +M+E LLP
Sbjct: 393 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 44/286 (15%)
Query: 138 IEDFQGLLSALCRYKN----VQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR--E 191
I DF +LS + + KN + H+ C + S+NI++N C SR
Sbjct: 10 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCG---IGHDLYSYNIVINCLCR---CSRFVI 63
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A V +M + G DVV+ S +I+ + + + + L +M+ MG D +YN +I
Sbjct: 64 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
K LV DA+ L ME GV + VTYNSL+ LC + + +A + +M+ R I P
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183
Query: 312 TIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ T+ A +D+ F + +F K++ E+
Sbjct: 184 NVITFTAVIDV--------------------------------FVKEGKFSEAMKLYEEM 211
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ PD +Y +LI+ L ++G+++EA Q M K LP+ T
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 257
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 161/370 (43%), Gaps = 26/370 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I +L K D A+ L +EM+ P + T ILI +C V +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT---ILIDSFCKVGLL 531
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+A F R A + + L+ A + + + A L M ++ P N ++
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTA 590
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSKA 221
+++G C G +A +++ M DV ++ ++ KA
Sbjct: 591 LIDGHCKS-GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + L D M G E + VY+A+I K + +A + M E+G PNV TY
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
+SLI L K ++LD A + ML+ +P + Y +D + + G +E + L+ M +
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC P TY +I F + + ++ ++ G P+ +Y LI+ G L++
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 399 AHQYYMEMKE 408
AHQ EMK+
Sbjct: 830 AHQLLDEMKQ 839
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 197/504 (39%), Gaps = 89/504 (17%)
Query: 1 AKTLVDILRE----FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 56
A + D++R F HK + + E K++ LV +VLS V+N E FF+WAG
Sbjct: 98 AVLISDVIRNTGDGFGHKTQKFLRQFRE---KLNETLVVDVLSLVKNP-ELGVKFFIWAG 153
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-- 114
+Q GY H+ YH ++ +LG + E+R + + + L +LIR+ C
Sbjct: 154 RQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKE---ILGKLLNVLIRKCCRN 210
Query: 115 -----AVHDVGRAINAFYAYKRFKFAVGIEDF---QGLLSALCRYKNVQDA--------- 157
A+ ++GR + Y R + + F L +A ++ + D+
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 158 --------------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
E L K+ F +T + +++G C EA M
Sbjct: 271 GCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCE-ASLFEEAMDFLSRMRSSS 329
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+VV++ ++ + R L + R+ M G R+++N++IHA + A
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 264 SLMKSMEEKGVAPNVVTYNSLI-------------------------------------- 285
L+K M + G P V YN LI
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449
Query: 286 ---KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKM 339
+ LC A K ++A EM+ +G P TY + ++ +V F L E M+
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P TY +LI F + K ++E+ +G P+ +YTALIHA K+ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
++ + M + +P T L D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALID 593
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 36/374 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y +I K RK +A L + M P++VT L I +C
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL---IDGHCKSG 599
Query: 118 DVGRAINAFYAYKR-----------FKFAVG------IEDFQGLLSALCRYKNVQDAEHL 160
+ +A YA R FK G I + L+ LC+ V++A L
Sbjct: 600 QIEKACQ-IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 161 MFCNKDVFPF-----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ DV N ++ +++G+C + G EA+ V+ +MS+RG +V ++S +I
Sbjct: 659 L----DVMSVEGCEPNHIVYDALIDGFCKV-GKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + L L++ +M + +Y +I L K +A LM MEEKG
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGL 332
PNVVTY ++I KA K+D+ + +M +G +P TY ++ ++ L
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L+ M++ Y +I+ F+ R+F + +EI+EN P +Y LI +
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 393 NGKLEEAHQYYMEM 406
G+LE A + + EM
Sbjct: 892 AGRLELALELHKEM 905
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F +T +++ ++ CN A ++ EM + DV +++ +I + K L +
Sbjct: 476 FIPDTSTYSKVIGLLCNA-SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ FD+M R G + Y A+IHA K R + A L + M +G PNVVTY +LI
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 288 LCKARKLDEARQAFDEMLQRGIS------------------PTIRTYHAFLDIIRTG--- 326
CK+ ++++A Q + M RG + P I TY A +D +
Sbjct: 595 HCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+E LL+ M GC+P + Y LI F + + V+ ++SE G GP+ +Y++L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
I LF + +L+ A + M E P
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAP 739
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 29/301 (9%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC V +A L+F + V P + ++ I+++ +C + G ++A + +
Sbjct: 483 YSKVIGLLCNASKVDNA-FLLFEEMKSNHVVP-DVFTYTILIDSFCKV-GLLQQARKWFD 539
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + G +VV+++ +I Y KAR + LF+ M G + Y A+I K
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 258 LVKDAISLMKSMEEKGVA------------------PNVVTYNSLIKPLCKARKLDEARQ 299
++ A + M +G A PN+ TY +L+ LCKA K+ EAR
Sbjct: 600 QIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
D M G P Y A +D + G +E + M + G P TY LI +
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ KV + + EN P+ YT +I L GK +EA++ M+EK P
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777
Query: 417 T 417
T
Sbjct: 778 T 778
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI L KV K D A+ L+ M P++VT + I + V + +
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAM---IDGFGKAGKVDKCLELMR 800
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF-PFNTKSFNIILNGWCNII 186
A ++ L++ C + DA L+ K + P + + ++ G+
Sbjct: 801 QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---- 856
Query: 187 GSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI--EC 241
+RE + + E+++ + ++ +I + KA L L L +M
Sbjct: 857 --NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAA 914
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D+ +Y+++I +L+ V A L M ++G P + + L+K L + + +EA Q
Sbjct: 915 DKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLS 974
Query: 302 DEMLQ 306
D + Q
Sbjct: 975 DCICQ 979
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 194/432 (44%), Gaps = 31/432 (7%)
Query: 29 VSSELVSEVLSWVRNDWE-----AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
V S L S +L+ V + ++ FF W + HS + TMI L K ++F T
Sbjct: 34 VGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKT 93
Query: 84 AWALIDEM--RGGETGPSLVT------------KQTLLILIRRYCAVHDVGRAINAFYAY 129
A L++ + R + PS++ Q L L+ Y AI F
Sbjct: 94 AQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHM 153
Query: 130 KRFKFAVGIEDFQGLLSALC--RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ F + LL++L R N+ + V P N FN++++ C G
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVP-NIHIFNVLIHACCKS-G 211
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+AE++ EM R I D+ +++ +IS Y K ++ L + D+M+R G+ D YN
Sbjct: 212 DVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYN 271
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I+ + +++A+ L + E G PN VTY +LI C+ L+EA + + M
Sbjct: 272 SLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVE 329
Query: 308 GISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ P + TY++ L + G+ + LL M + +P N T LI + + G+
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
KV ++ E G PD+ ++ ALIH +++ A ++ EM + P T L D
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS 449
Query: 425 SY---NKQFVER 433
Y NK+ V R
Sbjct: 450 YYDQDNKEAVIR 461
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 8/356 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + ++ +I K + A L++EM P L T TL+ L YC
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL---YCKKGMH 248
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A+ +R + I + L+ CR +++A L P N ++ ++
Sbjct: 249 YEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP-NHVTYTTLI 307
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C + EA R+ M G+ VV+++ I+ + + RL ++M +
Sbjct: 308 DGYCRV-NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D N +I+A K + A+ + K M E G+ P+ T+ +LI CK ++D A++
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 300 AFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
EML G SP+ TY +D E V L + + + G Y LI++
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + +++ + G D YT+L +A F GK A EM +++L+
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM 542
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 42/299 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I + + A L E+ G P+ VT TL I YC V
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTL---IDGYCRV 313
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+D+ A+ + G+ + +L LC ++DA L+ + V P N +
Sbjct: 314 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNV-T 372
Query: 175 FNIILNGWCNI--IGSSRE--------------------------------AERVWMEMS 200
N ++N +C I +GS+ + A+ EM
Sbjct: 373 CNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
G ++S ++ Y N V+RL D++ R G+ D VY A+I L K ++
Sbjct: 433 DAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIE 492
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A + M+ KG+ + V Y SL KA K A DEM +R + T++ Y F
Sbjct: 493 SAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCF 551
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 159/341 (46%), Gaps = 10/341 (2%)
Query: 88 IDEMRG-GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
+DE+ G E + + T ILI Y + +G A + + + + ++S
Sbjct: 236 VDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMIS 295
Query: 147 ALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
CR NV+ A L M C + + P NT +F +++G C G AE + EM +G
Sbjct: 296 WNCRAGNVRRASALFDEMIC-RGIVP-NTXTFGALISGVCKA-GQMEAAEILLEEMQCKG 352
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ +VV F+ ++ Y K + + RL D M+R G E D YN + L K ++A
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
++ M EKGVAPNVVT + I+ C+ L E + + +RG+ P I TY+ +D
Sbjct: 413 RVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAY 472
Query: 324 RTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
E+V L M + G P TY LI + K++NE+ G +
Sbjct: 473 SKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNV 532
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+YTA+I L G+ +EA + Y EM L+P+ + E L
Sbjct: 533 KTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEAL 573
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
F ++ C+ + +A L + F + ++NI+ +G C + EA+RV M
Sbjct: 360 FNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKL-HRYEEAKRVLNVM 418
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++G+ +VV+ + I Y + NL + R +++ G+ + YN +I A +K V
Sbjct: 419 VEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKV 478
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K A L M EKG+ P+V TY SLI C K+DEA + F+EML +GI ++TY A
Sbjct: 479 KQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAI 538
Query: 320 LDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ + +E L + M +MG P + + L+ +
Sbjct: 539 ISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA- 192
+G++ ++ LCR V A+ LM + V P ++N +LN ++ RE
Sbjct: 180 IGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVP-TVFTYNTLLNAC--VVRKDREGV 236
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + M + G+ +V+++ +I Y+ + + + +++++M +E D VY ++I
Sbjct: 237 DEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISW 296
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
+ V+ A +L M +G+ PN T+ +LI +CKA +++ A +EM +G+
Sbjct: 297 NCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 313 IRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ ++ +D + G +E F L + M + G + TY +L + ++ +V N
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLN 416
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
+ E G P+ + I G L E ++ ++++ ++P T L D +Y+K
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLID-AYSKN 475
Query: 430 FVERQIASLKAHQPQSG 446
+Q LKA + G
Sbjct: 476 EKVKQAHXLKAEMVEKG 492
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 259 VKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+ + + M E G V V + ++ LC+ ++ A++ +EM RG+ PT+ TY+
Sbjct: 162 VELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYN 221
Query: 318 AFLD--IIRTG----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
L+ ++R +E+ GL+E + G + TY +LI+ ++ + G KV+ E+
Sbjct: 222 TLLNACVVRKDREGVDEILGLME---REGVVASLVTYTILIEWYASSERIGEAEKVYEEM 278
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E D YT++I G + A + EM + ++P T
Sbjct: 279 CERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXT 324
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 42/268 (15%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T + +I+ + K + + A L++EM+ ++V T++ YC +
Sbjct: 317 GIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMM---DGYCKRGMM 373
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A +R F + + L S LC+ ++A+ ++ K V P N +
Sbjct: 374 DEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAP-NVVTCAT 432
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK----------------- 220
+ +C G+ E ER + +RG+ ++V+++ +I YSK
Sbjct: 433 FIEIYCQE-GNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEK 491
Query: 221 ------------------ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
+ + L+LF++M GI + K Y A+I L+K +A
Sbjct: 492 GLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEA 551
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ L M G+ P+ + +L+ L K
Sbjct: 552 LKLYDEMMRMGLIPDDRVFEALVGSLHK 579
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 183/428 (42%), Gaps = 44/428 (10%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA-- 86
++ L +++ N+ E FF W +QS Y + ++ +L F A
Sbjct: 1 MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 60
Query: 87 --LIDEMRGGETGP-----------------SLVTKQTLLILIRRYCAVHDVGRAINAFY 127
LI E E G S TLL+ + + + AF
Sbjct: 61 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAK------LNMGFVAFL 114
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNG 181
Y+R F +G D++ +++ALC+ VQ AE MFC K + F +T ++
Sbjct: 115 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE--MFCCKVLRLGFGLDTHVCTSLVLA 172
Query: 182 WC--NIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
C + +G EA RV+ +MS+ C + V++S +I +A L + +L +M G
Sbjct: 173 NCRRDDLG---EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 229
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + Y +I A + A+ ++ M K PNV TY LI LC+ K++EA
Sbjct: 230 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 289
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F +ML+ G+ P I T++A ++ + G F LL M K C+P TY L++
Sbjct: 290 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 349
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R + F + + +NG PDR +Y L+ G+L A + M L P+
Sbjct: 350 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDG 409
Query: 416 KTDELLQD 423
T L D
Sbjct: 410 FTFTALID 417
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 161/395 (40%), Gaps = 43/395 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G STR Y +I + D A ++DEM P++ T ILI R C
Sbjct: 227 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV---HTYTILIDRLCREG 283
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
+ A F + GI F L++ C+ V A L+ K N +++N
Sbjct: 284 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 343
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + S +A + + G+ D V+++ ++ + K L+ +F+ M
Sbjct: 344 ELMEGLCRV-SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--- 293
G+E D + A+I L K ++ A ++ SM +KG++ + VT+ +LI CK K
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 462
Query: 294 --------------------------------LDEARQAFDEMLQRGISPTIRTYHAFLD 321
L+EA +M++ G+ P++ T+ ++
Sbjct: 463 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 522
Query: 322 I-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R GE L LE M++ GC P TY ++I + + +S G P
Sbjct: 523 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 582
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +Y L+ A G+L+ A Q M + P
Sbjct: 583 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 617
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++G C + G +A + M ++GI D V+F+ +I + K V LF+
Sbjct: 411 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 469
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M +N + AL K + +A +++ M + G+ P+VVT+ LI+ C+A +
Sbjct: 470 MVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGE 529
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ + + M Q G SP + TY ++ + G EE +L SM G P + TY +
Sbjct: 530 TALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAV 589
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
L+K + + F++ + + +NG P+ Y+AL+ L+
Sbjct: 590 LVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 632
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 41/383 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R+D AF F K+ ++ Y +I L + + + A+ L EM PS
Sbjct: 176 RDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS-- 233
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+T +LI+ C D+G A
Sbjct: 234 -TRTYTVLIKAKC---DIGMTDKAMKMLDEMA---------------------------- 261
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K P N ++ I+++ C G EA V+ +M + G+C +++F+ +I+ Y K
Sbjct: 262 --TKACVP-NVHTYTILIDRLCRE-GKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 317
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +L M++ + + + YN ++ L + A L++ + + G+ P+ VTY
Sbjct: 318 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 377
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
N L+ CK +L+ A F+ M G+ P T+ A +D + + G E+ G+L SM K
Sbjct: 378 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 437
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G T+ LI + + +V ++ + EN ++ + AL + KL E
Sbjct: 438 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 497
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A+ +M + L+P T +L
Sbjct: 498 ANAMLGKMMKYGLVPSVVTHTIL 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 180/485 (37%), Gaps = 52/485 (10%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
+ + W + L ++ + R Y+ ++ L +V K A+ L+ + P
Sbjct: 313 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 372
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
VT IL+ +C + A N F + F L+ LC+ ++ A
Sbjct: 373 DRVTYN---ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429
Query: 159 HLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSR--------------------------- 190
++ K + +F +++G C I G ++
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKI-GKAKDVCFLFENMVENRCLTTAHTFNCFLDA 488
Query: 191 --------EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
EA + +M + G+ VV+ + +I + +A L++ ++MK+ G +
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +I+ L V++A +++ SM GV+PN TY L+K KA +LD A Q
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 608
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFG--LLESMRKMGCQPT----NDTYIMLIKKFS 356
M++ G P Y A L G L S + + ND + F
Sbjct: 609 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF- 667
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
R + K+ +EI + G P Y L+ L G++ EA Q +M + L P+
Sbjct: 668 RLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 726
Query: 417 TDELLQDWS----YNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVV 472
+++ + Y+ ++ P VI ++ R Q +V
Sbjct: 727 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786
Query: 473 RHQGF 477
RH G
Sbjct: 787 RHTGI 791
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA+L + A ++++M ++ ++ +C D+ A N F
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
++ A + L++ LCR +++AE ++ +D + ++ ++++G+C +
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV- 438
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA V +M Q+ + +VV+++ + K ++ L +M G+E + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++I+ L K ++ A+ M M+E G+ P+V TY ++I LC++++LD A EML
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFG---LLE---------------SMRKMGC------- 341
+GI PTI TY+ ++ V G LLE S+ K C
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 342 -------------QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
P +TY +LIK + R +E+ E G SSY ALI
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
L K EA + + +M++++L EP D S+N+ +E +A
Sbjct: 679 LLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 6/274 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL ALC ++DA L ++ P + ++ I+++G+C + A ++ EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLF--DEMASPPDVVTYGIMVHGYCTL-SELETAIKLLSEMAARG 315
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + V+++ +I+ + +R+ + M G+ D V+ V+ + + A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ M+++G+A + VTY +LI LC+A +L EA + EM +G+ TY +D
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ E F + M + P TY L + ++ +E+ G +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y +LI+ L G LE+A + ++M E L P+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D VSF ++ C A L ++++ GI + NAV+ L + +A+ L
Sbjct: 197 DPVSFDLLLLCLPSAP-------LLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLF 245
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLDI 322
+ + EK N +YN L+K LC A ++ +A Q FDEM P + TY H + +
Sbjct: 246 QELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTL 298
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E LL M G + Y +I Q + +V ++ +G D +
Sbjct: 299 SEL-ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+T ++ G L A ++ EM+++ L
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGL 386
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 7/241 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K + A + +M P + T T+ I C ++ RA +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI---IGALCQSKELDRAHSLLQ 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I + L++ C V+ + L+ K++ P NT ++N ++ +C I
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP-NTTTYNSLMKQYC-I 612
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + ++ M + + + +++ +I + KARN+ + L +M G
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA+I L K + +A L + M ++ + YN I L+ DE++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 306 Q 306
+
Sbjct: 733 E 733
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 165/355 (46%), Gaps = 10/355 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L K A L DEM P ++T T+ I C + AI
Sbjct: 50 FSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTI---INGLCKMGSTTMAIQLLK 106
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + ++ +LC+ K + +A + N+ + P N +++ IL+G+CN+
Sbjct: 107 KMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP-NVVTYSSILHGFCNL 165
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G S EA ++ +M +R + D V+F+ ++ SK + + +F+ M G+E +
Sbjct: 166 -GRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNT 224
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA++ + +A L M KG AP+V +YN LIK CK+ ++DEA+ EM
Sbjct: 225 YNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMS 284
Query: 306 QRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ ++P TY + + G ++ LLE MR G P TY +++ +
Sbjct: 285 HKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLD 344
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
F++ + E+ P+ YT LI + GKLE A + + + K + P+ T
Sbjct: 345 EAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVT 399
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 27/354 (7%)
Query: 105 TLLILIRRYC-AVHDVGRAINAFYAYKRFK--FAVGIE----DFQGLLSALCRYKNVQDA 157
TL ILI +C + HD + +A+ F +G++ F LL+ L + DA
Sbjct: 12 TLTILINCFCHSNHD-----HFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66
Query: 158 EHL------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
L M DV ++T I+NG C + GS+ A ++ +M ++G +VV +
Sbjct: 67 VKLFDEMVKMGYEPDVITYST-----IINGLCKM-GSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S II K + + + + +M GI + Y++++H +A SL K M E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EE 328
+ V P+ VT+N L+ L K + EA+ F+ M+++G+ P + TY+A +D + +E
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L M + GC P+ +Y +LIK + + + E+S PD +Y+ L+
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
+G+ ++A + EM+ LLP+ T ++ D + ++ LKA Q
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 166/344 (48%), Gaps = 22/344 (6%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F A++++ M P+ VT TLL + + D A+ F + + +
Sbjct: 28 FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID---AVKLFDEMVKMGYEPDVIT 84
Query: 141 FQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCN--IIGSSREA 192
+ +++ LC+ + A L+ C +V ++T I++ C +I EA
Sbjct: 85 YSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST-----IIDSLCKDKLI---TEA 136
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
EM RGI +VV++S I+ + ++ LF QM + D +N ++
Sbjct: 137 MEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDG 196
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L+K ++ +A + ++M EKGV PNV TYN+L+ C ++DEA++ F+ M+++G +P+
Sbjct: 197 LSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256
Query: 313 IRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+R+Y+ + ++G +E GLL M P TY L+K F + + + K+
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
E+ G PD +Y+ ++ L G L+EA + M+E ++ P
Sbjct: 317 EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 170/392 (43%), Gaps = 19/392 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVL-SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
++ K+EE G K + + S ++ S ++ FL G + + Y +++
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
+ + + A +L +M P VT IL+ + A F
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFN---ILVDGLSKEGMILEAQCVFETMIEKGVE 219
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ + L+ C + +A+ L + K P + +S+NI++ G C G EA+
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAP-SVRSYNILIKGHCKS-GRIDEAK 277
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+ EMS + + D V++S ++ + + +L ++M+ G+ D Y+ V+ L
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K + +A L+K+M+E + PN+ Y LI+ +C KL+ AR+ F + +GI P +
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397
Query: 314 RTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY + + G E L M GC P + TY ++I+ F R N ++ E
Sbjct: 398 VTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457
Query: 371 ISENGNGPDRSSYTAL--------IHALFLNG 394
+ G D S++ L I +LF++G
Sbjct: 458 MVGRGFSADSSTFQMLSDLESRDEIISLFMHG 489
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 18/359 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I K+ A L+ + P VT +L I CA DV RA+ F
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL---INGLCAEGDVERALELFN 350
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
+ I + L+ LC + A +M C+ D+ +++NI++NG
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI-----QTYNIVING 405
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + G+ +A V + +G DV +F+ +I Y K L L+L ++M GI
Sbjct: 406 LCKM-GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN+V++ L K V + + M KG PN +TYN LI+ C++ K++EA +
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+M Q G+ P +++ + R G E + L + + + G T DT+ LI FS
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+++E+ G+ D +Y LI ++ A+ + +EM +K +P T
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 643
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 43/342 (12%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I IR C + A+ + + + + L+ LC+ Q+A H + N+
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + ++N I++G+C I +EA + + +G D V++ +I+ ++
Sbjct: 286 GCLP-DDFTYNTIIDGYCKI-SMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L LF++ + GI+ D VYN+++ L L+ A+ +M M E+G P++ TYN +I
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403
Query: 286 KPLCKA-----------------------------------RKLDEARQAFDEMLQRGIS 310
LCK KLD A Q + M + GI+
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY++ L+ + +V + E+ ++M GC P TY +LI+ F R + KV
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++S+ G PD S+ LI+ NG LE A+ + +++EK
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 15/361 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L D A + M P L T I +R +C A+
Sbjct: 89 YNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL---HTHTIRLRSFCLTARPHIALRLLR 145
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A G + ++ L + + DA L + VFP N +FN +L+ C
Sbjct: 146 ALPHR----GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLAAFNKVLHALCKR 200
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA + ++ QRG+ ++ +++ I +A L + +RL D M+ + D
Sbjct: 201 -GDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVT 258
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I L K + ++A+ ++ M +G P+ TYN++I CK + EA + + +
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 318
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+G P TY + ++ + G E L + G +P Y L+K
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ +V NE++E G PD +Y +I+ L G + +A + K LP+ T L
Sbjct: 379 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 423 D 423
D
Sbjct: 439 D 439
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL--CRYKNVQDAEHLMFCNKDV 167
IR Y + A++AF F + ++ AL Y + ++ V
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + + I L +C + A R+ + RG V++ ++ + H
Sbjct: 118 SP-DLHTHTIRLRSFC-LTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDA 171
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+LFDQM + + +N V+HAL K V +A L+ + ++G++ N+ TYN I+
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
LC+A +L EA + D M + P + TY+ + + +E L M GC P
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY +I + + ++ + G PD+ +Y +LI+ L G +E A + +
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
Query: 405 EMKEKQLLPE 414
E + K + P+
Sbjct: 351 EAQAKGIKPD 360
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ +I L K+ A ++++ P + T TL I YC
Sbjct: 389 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL---IDGYCKRL 445
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+ + A + +L+ LC+ V + K P N ++
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP-NPITY 504
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++ +C EA +V ++MSQ G+ D VSF+ +I + + +L LF +++
Sbjct: 505 NILIENFCRS-NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G +N +I A + + A + M KG + TY LI CK +D
Sbjct: 564 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQP 343
A EM+++G P++ T+ ++ + VF G++ M K+G P
Sbjct: 624 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R+ +Y A I A A+ ++DA+ + M+ P YN+++ L A D
Sbjct: 44 RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 103
Query: 296 EARQAFDEMLQRGISPTIRTY 316
+A + + ML G+SP + T+
Sbjct: 104 QAHKVYVRMLAAGVSPDLHTH 124
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 183/428 (42%), Gaps = 44/428 (10%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA-- 86
++ L +++ N+ E FF W +QS Y + ++ +L F A
Sbjct: 44 MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 103
Query: 87 --LIDEMRGGETGP-----------------SLVTKQTLLILIRRYCAVHDVGRAINAFY 127
LI E E G S TLL+ + + + AF
Sbjct: 104 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAK------LNMGFVAFL 157
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNG 181
Y+R F +G D++ +++ALC+ VQ AE MFC K + F +T ++
Sbjct: 158 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE--MFCCKVLRLGFGLDTHVCTSLVLA 215
Query: 182 WC--NIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
C + +G EA RV+ +MS+ C + V++S +I +A L + +L +M G
Sbjct: 216 NCRRDDLG---EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 272
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + Y +I A + A+ ++ M K PNV TY LI LC+ K++EA
Sbjct: 273 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 332
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F +ML+ G+ P I T++A ++ + G F LL M K C+P TY L++
Sbjct: 333 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 392
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R + F + + +NG PDR +Y L+ G+L A + M L P+
Sbjct: 393 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDG 452
Query: 416 KTDELLQD 423
T L D
Sbjct: 453 FTFTALID 460
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 161/395 (40%), Gaps = 43/395 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G STR Y +I + D A ++DEM P++ T ILI R C
Sbjct: 270 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV---HTYTILIDRLCREG 326
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
+ A F + GI F L++ C+ V A L+ K N +++N
Sbjct: 327 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 386
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + S +A + + G+ D V+++ ++ + K L+ +F+ M
Sbjct: 387 ELMEGLCRV-SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--- 293
G+E D + A+I L K ++ A ++ SM +KG++ + VT+ +LI CK K
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 505
Query: 294 --------------------------------LDEARQAFDEMLQRGISPTIRTYHAFLD 321
L+EA +M++ G+ P++ T+ ++
Sbjct: 506 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 565
Query: 322 I-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R GE L LE M++ GC P TY ++I + + +S G P
Sbjct: 566 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 625
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +Y L+ A G+L+ A Q M + P
Sbjct: 626 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 660
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++G C + G +A + M ++GI D V+F+ +I + K V LF+
Sbjct: 454 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 512
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M +N + AL K + +A +++ M + G+ P+VVT+ LI+ C+A +
Sbjct: 513 MVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGE 572
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ + + M Q G SP + TY ++ + G EE +L SM G P + TY +
Sbjct: 573 TALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAV 632
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
L+K + + F++ + + +NG P+ Y+AL+ L+
Sbjct: 633 LVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 675
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 41/383 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R+D AF F K+ ++ Y +I L + + + A+ L EM PS
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS-- 276
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+T +LI+ C D+G A
Sbjct: 277 -TRTYTVLIKAKC---DIGMTDKAMKMLDEMA---------------------------- 304
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K P N ++ I+++ C G EA V+ +M + G+C +++F+ +I+ Y K
Sbjct: 305 --TKACVP-NVHTYTILIDRLCRE-GKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 360
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +L M++ + + + YN ++ L + A L++ + + G+ P+ VTY
Sbjct: 361 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 420
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
N L+ CK +L+ A F+ M G+ P T+ A +D + + G E+ G+L SM K
Sbjct: 421 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 480
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G T+ LI + + +V ++ + EN ++ + AL + KL E
Sbjct: 481 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 540
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A+ +M + L+P T +L
Sbjct: 541 ANAMLGKMMKYGLVPSVVTHTIL 563
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 180/485 (37%), Gaps = 52/485 (10%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
+ + W + L ++ + R Y+ ++ L +V K A+ L+ + P
Sbjct: 356 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 415
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
VT IL+ +C + A N F + F L+ LC+ ++ A
Sbjct: 416 DRVTYN---ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472
Query: 159 HLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSR--------------------------- 190
++ K + +F +++G C I G ++
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKI-GKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531
Query: 191 --------EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
EA + +M + G+ VV+ + +I + +A L++ ++MK+ G +
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +I+ L V++A +++ SM GV+PN TY L+K KA +LD A Q
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFG--LLESMRKMGCQPT----NDTYIMLIKKFS 356
M++ G P Y A L G L S + + ND + F
Sbjct: 652 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVF- 710
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
R + K+ +EI + G P Y L+ L G++ EA Q +M + L P+
Sbjct: 711 RLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 769
Query: 417 TDELLQDWS----YNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVV 472
+++ + Y+ ++ P VI ++ R Q +V
Sbjct: 770 ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829
Query: 473 RHQGF 477
RH G
Sbjct: 830 RHTGI 834
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 169/367 (46%), Gaps = 10/367 (2%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y T+I + K+ A L+ ++ G T P++ T+ I C V A F
Sbjct: 166 SYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI---IDALCKYQLVSEAYGLF 222
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + + L+ C +++A L+ K + P N ++NI+++ C
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP-NVYTYNILVDALCK 281
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +EA+ V M + + DV+++S ++ Y L K +F+ M MG+ D
Sbjct: 282 E-GKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y +I+ K ++V +A++L K M +K + P +VTY+SLI LCK+ ++ DEM
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
RGI + TY++ +D + + G + L M+ G +P + T+ +L+ + +
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ + + ++ G D Y +I+ G LEEA +M+E +P T +++
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDII 520
Query: 422 QDWSYNK 428
+ + K
Sbjct: 521 INALFKK 527
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T +F ++ G C + G +A ++ +GI +D VS+ +I+ K + ++L
Sbjct: 128 HTITFTTLIKGLC-LKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 186
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ + + ++YN +I AL K +LV +A L M KG++ +VVTY +LI C
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCI 246
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A KL EA +EM+ + I+P + TY+ +D + + G +E +L M K +P T
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ + + V+N +S G PD SYT LI+ N ++EA + EM
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH 366
Query: 408 EKQLLPEPKTDELLQD 423
+K ++P T L D
Sbjct: 367 QKNMVPGIVTYSSLID 382
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 13/280 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K K A ++ M P ++T TL+ Y V+++ +A + F
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM---DGYFLVYELKKAQHVFN 328
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A + + L++ C+ K V +A +L K++ P +++ +++G C
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLC-- 385
Query: 186 IGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
S VW EM RGI +V++++ +I K +L + + LF++MK GI
Sbjct: 386 --KSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ ++ L KG +KDA + + KG +V YN +I CK L+EA
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
+M + G P T+ ++ + +E + +R+M C+
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICR 543
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 157/323 (48%), Gaps = 23/323 (7%)
Query: 110 IRRYCAVHDVGRAINAFYAYKRF--KFAVGIEDFQGLLS-------ALCRYKNVQDAEHL 160
+RRY + A+ AF+ +R ++ V + S ALC+ + + A L
Sbjct: 118 VRRYARLGRSSAALRAFHFLRRNPDRYTVDGDASPAATSLLNMAVGALCKEGHPRPAAKL 177
Query: 161 M-FCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERV---WMEMSQRGICYDVVSFSCI 214
+ C ++ + P + +++N++L+GW ++R ++V W EM G+ VVS+ +
Sbjct: 178 VKRCRREGELAP-DERTYNMLLDGW----STARRMDKVGKLWAEMCVAGVRPTVVSYGTL 232
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I + + + + L D+M++ GIE + N ++HALA +DA +L++ GV
Sbjct: 233 IKAVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGV 292
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEEVFG-- 331
APN+ T+NSL+ CK L A M+ RGI PT +TY+ F +TG G
Sbjct: 293 APNISTFNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMN 352
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L M G P TY +L+K + V ++ E+ NG D ++ T LIH L
Sbjct: 353 LYNKMVNNGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLC 412
Query: 392 LNGKLEEAHQYYMEMKEKQLLPE 414
+ + EEA + +M + +P+
Sbjct: 413 RSHRFEEACAEFKDMFRRGHVPQ 435
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ A R Y+ ++ R+ D L EM P++V+ TL I+ C V
Sbjct: 183 REGELAPDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTL---IKAVCRV 239
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+A++ ++ + ++ AL +DA +L+ F V P N +
Sbjct: 240 QQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAP-NIST 298
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN ++ +C G A V M RGI +++ ++K N+ + L+++M
Sbjct: 299 FNSLVLAYCKY-GDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKM 357
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G D+ YN ++ L + ++ + ++K M G ++ T LI LC++ +
Sbjct: 358 VNNGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRF 417
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
+EA F +M +RG P TY + ++ GL+E K+
Sbjct: 418 EEACAEFKDMFRRGHVPQYITYRMLMKELKR----LGLVELEEKL 458
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 185/433 (42%), Gaps = 50/433 (11%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
V+ E+ VL V D + A+TFF WAG + G+ H+ ++ K ++ + A L+
Sbjct: 41 VTPEVAGRVLQQV-EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLL 99
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL 148
E P+ + T +I +C V +A K + + L+ L
Sbjct: 100 KEELEPLCFPNEIMYTT---VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGL 156
Query: 149 CRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR----- 202
CR + +A E ++ P N ++N ++NG C EA ++ +M +R
Sbjct: 157 CRKGRIDEALEQFKSMGEECSP-NVITYNTVVNGLCK-ANRIDEALELFDDMEKRYEASH 214
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G DV+S+S +I KA+ + K F +M+ +G + Y+++I L K +
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 263 ISLMKSMEEKGVA-----------------------------------PNVVTYNSLIKP 287
+ L+ M+EKG PNVVTYN +
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
LCKA ++DEA + EM++ ++P + TY + +D + G ++ + M C P
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T++ L+ FS ++ F+V ++ G P +Y L+ + +E A + Y
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454
Query: 405 EMKEKQLLPEPKT 417
+MK K+ P+ T
Sbjct: 455 KMKRKKRQPDCNT 467
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 166/428 (38%), Gaps = 46/428 (10%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L K+ G+ + +++ M+ L K + + A + + P++VT + +
Sbjct: 277 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN---VAVH 333
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C V A K + + ++ C+ + A+ + + P
Sbjct: 334 GLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 393
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +F +L+G+ SREA RV +M G + +++ ++ C A ++ L
Sbjct: 394 -HPVTFMTLLHGFSEH-KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 451
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
++ +MKR + D Y +I L + R V +A + ME V PN ++L++ LC
Sbjct: 452 IYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 511
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------------------- 320
K ++DEA D +++ G P T+ +
Sbjct: 512 KQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYS 571
Query: 321 ----DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+I + G +E ++E M G +P TY+ +++ + + + +++
Sbjct: 572 LCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASR 631
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT----DELLQDWSYNKQF 430
G P +YT LI +EA + + M P+ +T L+D Y
Sbjct: 632 GCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLL 691
Query: 431 VERQIASL 438
V ++I ++
Sbjct: 692 VRQRIMTM 699
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+++A K + ++A L+K E PN + Y ++I CKA ++D+A + DEM +RG
Sbjct: 82 LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141
Query: 309 ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFK 366
+ + + + + + LE + MG C P TY ++ + + +
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALE 201
Query: 367 VWNEI-----SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+++++ + +G PD SY+ +I AL ++++A++Y+ M+ P T L
Sbjct: 202 LFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSL 261
Query: 422 QD 423
D
Sbjct: 262 ID 263
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 43/408 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA+L + A ++++M ++ ++ +C D+ A N F
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGV---VLDAAVFTTVMSGFCRKGDLAAARNWFD 379
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
++ A + L++ LCR +++AE ++ +D + ++ ++++G+C +
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV- 438
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA V +M Q+ + +VV+++ + K ++ L +M G+E + Y
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++I+ L K ++ A+ M M+E G+ P+V TY ++I LC++++LD A EML
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFG---LLE---------------SMRKMGC------- 341
+GI PTI TY+ ++ V G LLE S+ K C
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 342 -------------QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
P +TY +LIK + R +E+ E G SSY ALI
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
L K EA + + +M++ +L EP D S+N+ +E +A
Sbjct: 679 LLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLA 726
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 6/274 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL ALC ++DA L ++ P + ++ I+++G+C + A ++ EM+ RG
Sbjct: 259 LLKALCTAGRIKDAHQLF--DEMASPPDVVTYGIMVHGYCTL-SELETAIKLLSEMAARG 315
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + V+++ +I+ + +R+ + M G+ D V+ V+ + + A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ M+++G+A + VTY +LI LC+A +L EA + EM +G+ TY +D
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ E F + M + P TY L + ++ +E+ G +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+Y +LI+ L G LE+A + ++M E L P+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPD 529
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D VSF ++ C A L ++++ GI + NAV+ L + +A+ L
Sbjct: 197 DPVSFDLLLLCLPSAP-------LLLRLRQYGISPSPESCNAVLCRLP----LDEAVQLF 245
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLDI 322
+ + EK N +YN L+K LC A ++ +A Q FDEM P + TY H + +
Sbjct: 246 QELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTL 298
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E LL M G + Y +I Q + +V ++ +G D +
Sbjct: 299 SEL-ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+T ++ G L A ++ EM+++ L
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGL 386
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 7/248 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K + A + +M P + T T+ I C ++ RA +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI---IGALCQSKELDRAHSLLQ 554
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I + L++ C V+ + L+ K++ P NT ++N ++ +C I
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP-NTTTYNSLMKQYC-I 612
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + ++ M + + + +++ +I + KARN+ + L +M G
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA+I L K + +A L + M + + YN I L+ DE++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 306 QRGISPTI 313
+ + +I
Sbjct: 733 EVTLVKSI 740
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 167/350 (47%), Gaps = 8/350 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S Y MI L + A L+++M P++V TL++ + + R +
Sbjct: 348 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGW 182
+ A I + ++S L + +++A +L+ + +F + G+
Sbjct: 408 DGMSCSG---VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 464
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G EA + + EM G+ + ++ +I+ + KA NL + L +F + +G+ D
Sbjct: 465 SKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 523
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ +A IH L K V++A+ + ++EKG+ P+V TY+SLI CK ++++A + D
Sbjct: 524 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 583
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM +GI+P I Y+A +D + ++G+ L + M + G +P + TY +I + +
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F +++E+ G P Y AL+H G +E+A + EM +K
Sbjct: 644 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 693
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 14/364 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y + A L + ++ + A +EM+ P L+ R +
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTK 173
+V R + + + + + L+ LC++ ++ A ++ K + N++
Sbjct: 262 EVLRIKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEIL---KGMITLGCKPNSR 315
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++ G+C R E + EM +R + VS+ +I+ ++L +L ++
Sbjct: 316 TFCLLIEGYCREHNMGRALE-LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G++ + VY+ +I A +++A L+ M GVAP++ YN++I L KA K
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
++EA E+ RG+ P T+ AF L +TG+ E + M G P N Y +
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + ++ + G PD + +A IH L NG+++EA + + E+KEK
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 411 LLPE 414
L+P+
Sbjct: 555 LVPD 558
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 8/308 (2%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFN 176
V A+ F K + + L+S C+ V+ A H C K + P N +N
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP-NIFIYN 598
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G C G + A +++ M ++G+ D V++S +I Y K+ N+ + LF +M
Sbjct: 599 ALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ VYNA++H K ++ A++L + M +KG A +++N+LI CK+ K+ E
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQE 716
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A Q F EM+ + I P TY +D + G EE L + M++ TY L+
Sbjct: 717 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 776
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++ Q VF ++ ++ G PD +Y +I+A L EA + E+ K +L
Sbjct: 777 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 836
Query: 414 EPKTDELL 421
+ +LL
Sbjct: 837 KGTIHDLL 844
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 35/408 (8%)
Query: 28 KVSSELVSEVLSWVR-NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
K++ +++ VL + D + FF W+ Q G + + L F A
Sbjct: 66 KLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANG 125
Query: 87 LIDEMRGGETGPSLVTKQTLL--------------ILIRRYCAVHDVGRAINAFYAYKRF 132
++ +M S + L ILI Y + + A N F+ K
Sbjct: 126 VLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKN- 184
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+L +L R +++ K + P NT ++ II G C EA
Sbjct: 185 ---------DSILISLIRCNSLRSMGE-----KGLVP-NTYTYTIITAGLCRA-KRMNEA 228
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + EM + G+ D + S +I + + ++ +VLR+ D M GI + YN +IH
Sbjct: 229 KLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHG 288
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L K ++ A ++K M G PN T+ LI+ C+ + A + DEM +R + P+
Sbjct: 289 LCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPS 348
Query: 313 IRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+Y A ++ + +++ LLE M G +P Y LI ++ + ++ +
Sbjct: 349 AVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLD 408
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+S +G PD Y A+I L GK+EEA Y +E++ + L P+ T
Sbjct: 409 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 456
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N++++G C G +A + M G + +F +I Y + N+ +
Sbjct: 275 IPINLITYNVLIHGLCKF-GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 333
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L D+M++ + Y A+I+ L + + A L++ M G+ PNVV Y++LI
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
+++EAR+ D M G++P I Y+A + + EE L ++ G +P
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T+ I +S+ + K ++E+ ++G P+ YT LI+ F G L EA +
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 513
Query: 405 EMKEKQLLPEPKT 417
+ +LP+ +T
Sbjct: 514 HLHALGVLPDVQT 526
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 19/304 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y TMI K A++L EM P L + C
Sbjct: 622 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL---VHGCCKEG 678
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ +A+N F + FA + F L+ C+ +Q+A L K + P +
Sbjct: 679 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+I W G EA ++ EM +R + D V+++ ++ Y+K +V LF++M
Sbjct: 738 TVI--DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y VI+A K + +A L + KG+ ++ LI LCK L
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855
Query: 296 EARQAFDEMLQRGISPT-------IRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
EA + DEM + G+ P+ +R++H + +E + E ++ +G P T
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM----DEATRVFEGVKSLGLVPDTTTL 911
Query: 349 IMLI 352
I L+
Sbjct: 912 IDLV 915
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 20/347 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y+ ++ L K A L D M P VT T+ I YC +V
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM---IDGYCKSENV 645
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A + F+ + L+ C+ +++ A +L T SFN ++
Sbjct: 646 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 705
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C +EA +++ EM + I D V+++ +I + KA + + LF +M+ +
Sbjct: 706 DGYCKSC-KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D Y ++++ K + +L + M KGV P+ VTY +I CK L EA +
Sbjct: 765 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 824
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLI 352
DE++ +G+ T T H D++ T E LL+ M ++G +P+ L+
Sbjct: 825 LRDEVVGKGML-TKGTIH---DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ F + +V+ + G PD ++ L+ NG L +
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV-----NGNLNDT 922
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 179/388 (46%), Gaps = 16/388 (4%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
++ ++S +LS + + A ++ + ++ + Y+ M+ + + +F+ L+D
Sbjct: 219 NARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLD 278
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
MR P LV+ TL I R AI +R + L+SA
Sbjct: 279 LMRERGCKPDLVSFNTL-INARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACS 337
Query: 150 RYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N+++A + C D++ +N I + G C + G +AE+++ ++ RG
Sbjct: 338 RASNLEEAAKVFDDMEAHHCQPDLWTYNAM---ISVYGRCGLSG---KAEQLFNDLESRG 391
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D VS++ ++ +++ N+ KV ++++M ++G D YN +IH K + A+
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
L + M+ G P+ VTY LI L K K+ EA EML G+ PT++TY A +
Sbjct: 452 QLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGY 511
Query: 323 IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ V + M + G +P + Y +++ R+ + ++ E+ +G D
Sbjct: 512 AKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDH 571
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKE 408
S Y ++ L K+E+ + +M+E
Sbjct: 572 SLYELMLRTLRKVNKVEDIGRVIRDMEE 599
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 11/224 (4%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKD-AISL 265
V ++ ++ Y++ +KV L D M+ G + D +N +I+A L G ++ + AI L
Sbjct: 254 VQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIEL 313
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-R 324
+ + G+ P+ +TYN+LI +A L+EA + FD+M P + TY+A + + R
Sbjct: 314 LNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGR 373
Query: 325 TG-----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
G E++F LES G P +Y L+ F+R V ++W E+ + G G D
Sbjct: 374 CGLSGKAEQLFNDLESR---GFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKD 430
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y +IH G+ E A Q Y +M+ P+ T +L D
Sbjct: 431 EMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLID 474
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 159/390 (40%), Gaps = 46/390 (11%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
++L V S + W A + W + Y+ + R T++++LGK + A A+
Sbjct: 186 TDLCFVVKSVGQESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQ--EALAVEVF 243
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
MR PS G + + A G+ + R
Sbjct: 244 MRAE---PS-------------------AGNTVQVYNA------------MMGVYARRGR 269
Query: 151 YKNVQDAEHLM---FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
+ VQ+ LM C D+ FNT N L + + E + E+ + G+ D
Sbjct: 270 FNKVQELLDLMRERGCKPDLVSFNTL-INARLKAGAMMPNLAIE---LLNEVRRSGLRPD 325
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++++ +IS S+A NL + ++FD M+ + D YNA+I + L A L
Sbjct: 326 TITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFN 385
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT-- 325
+E +G P+ V+YNSL+ + +++ ++ ++EM++ G TY+ + +
Sbjct: 386 DLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQG 445
Query: 326 -GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E L M+ G P TY +LI + + V +E+ G P +Y+
Sbjct: 446 QNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYS 505
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
ALI GK EA + + M + P+
Sbjct: 506 ALICGYAKAGKPVEAEETFDCMLRSGIRPD 535
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+L A R N+ + + + K F T ++ + R+ E + EM + G
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAG 948
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D+ ++ ++ Y + K ++++ ++K G+E D YN +I + ++
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGF 1008
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
SLM M G+ P + TY SL+ K + +++A + F+E+ +G YH + I
Sbjct: 1009 SLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIY 1068
Query: 324 RT------GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
R E +F + M+ G +PT T +L+ + Q KV + + E G+
Sbjct: 1069 RNSGSHSKAERLFSM---MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSN 1125
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y+++I A NG Q ++MK++ L P+
Sbjct: 1126 LSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPD 1162
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNL--HKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M +RG D+VSF+ +I+ KA + + + L ++++R G+ D YN +I A ++
Sbjct: 280 MRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRA 339
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+++A + ME P++ TYN++I + +A Q F+++ RG P +Y
Sbjct: 340 SNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY 399
Query: 317 HAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
++ L R G E+V + E M K+G TY +I + + Q +++ ++
Sbjct: 400 NSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQS 459
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+G PD +YT LI +L K+ EA EM + P KT
Sbjct: 460 SGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKT 503
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V E+ G S ++ +++A N+ +V +++ MK G +Y + L+
Sbjct: 870 VVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLS 929
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+G+ V+D +++ MEE G P++ +NS++K + Q + + + G+ P
Sbjct: 930 RGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDED 989
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ + + EE F L+ MR G +P DTY L+ F + + +++ E+
Sbjct: 990 TYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEEL 1049
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ---DWSYNK 428
G DRS Y ++ +G +A + + MK+ + P T LL S
Sbjct: 1050 QSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQP 1109
Query: 429 QFVERQIASLKAHQPQSGQNTRVISKKSDQD 459
Q E+ +++LK ++G N + S D
Sbjct: 1110 QEAEKVLSNLK----ETGSNLSTLPYSSVID 1136
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 203 GICYDVVS-FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
GI + +S + +I Y + + K + +++ I DRKV+NA+I A A +
Sbjct: 772 GILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYER 831
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A ++ +M G +P V T N L++ L +LDE E+ G + + LD
Sbjct: 832 ARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLD 891
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R G EV + M+ G PT Y ++ + SR +Q +V + +E+ E G P
Sbjct: 892 AFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKP 951
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
D S + +++ + Q Y +KE L P+ T YN V
Sbjct: 952 DLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDT--------YNTLIV----MYC 999
Query: 439 KAHQPQSG 446
+ H+P+ G
Sbjct: 1000 RDHRPEEG 1007
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 122/322 (37%), Gaps = 41/322 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +GY + Y M +L + ++ A++ EM P L ++L + Y A+
Sbjct: 910 KAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL---KMYVAI 966
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
D + I + K + + L+ CR ++ LM
Sbjct: 967 EDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMH-------------- 1012
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
EM G+ + ++ +++ + K + + + LF++++
Sbjct: 1013 ---------------------EMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1051
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + DR Y+ ++ A L M++ GV P + T + L+ + + E
Sbjct: 1052 KGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQE 1111
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIK 353
A + + + G + + Y + +D +R G+ G+ L M+K G +P + + I+
Sbjct: 1112 AEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIR 1171
Query: 354 KFSRWRQFGNVFKVWNEISENG 375
S R+ + N + + G
Sbjct: 1172 AASLSRRTSEAIVLLNALQDAG 1193
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR-KVYNAV 249
EA +V+ +M GI + ++ Y K L D + GI + +Y V
Sbjct: 725 EASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNV 784
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I A + +L + A S+ ++ ++ + + +N+LI+ + + AR F+ M++ G
Sbjct: 785 IEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGP 844
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SPT+ T + L +I G +E++ +++ ++ MG + + + ++++ F+R V K
Sbjct: 845 SPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKK 904
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+++ + G P Y + L ++ + EM+E P+
Sbjct: 905 IYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPD 952
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 176/410 (42%), Gaps = 64/410 (15%)
Query: 19 RNKIEECGIKVSSELVSEVLSWVRNDWEA---------AFTFFLWAGKQSGYAHSTREYH 69
R ++E ++VS+ELV EVLS + ++ A+ FFLWAG+Q GY HST Y+
Sbjct: 121 RQALDEMNLRVSNELVREVLSRIVVSVDSVNRERFPRLAYKFFLWAGQQEGYHHSTGMYN 180
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAF 126
++ + + + W L++EM E G S ++ +T +LI C G R + F
Sbjct: 181 LVMKVFAQCGEVKAMWRLLEEMT--ENGLS-ISARTFHLLI---CTCGQAGLRRRLVERF 234
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F + PF SFN IL+ I
Sbjct: 235 IKSSSFNYR---------------------------------PFRN-SFNAILHTLLTIE 260
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
S E V +M G DV++++ ++ L + RL D+M + G+ D Y
Sbjct: 261 QYSL-IEWVHQKMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTY 319
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++H L KG A++L+ M + G P+V+ + +LI L +A L+ + FDEM++
Sbjct: 320 NILLHVLGKGDKPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMK 379
Query: 307 RGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+G P + Y ++ TG EE L + M G P TY +I+
Sbjct: 380 KGCEPDVVCY----TVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVG 435
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+F + ++ G P+ S Y+ L+ L GK EA+ M K
Sbjct: 436 EFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKYMANK 485
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T +N+++ + G + R+ EM++ G+ +F +I +A +++
Sbjct: 175 STGMYNLVMKVFAQC-GEVKAMWRLLEEMTENGLSISARTFHLLICTCGQAGLRRRLVER 233
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK----GVAPNVVTYNSLIK 286
F + R +NA++H L L + SL++ + +K G +P+V+TYN +++
Sbjct: 234 FIKSSSFNYRPFRNSFNAILHTL----LTIEQYSLIEWVHQKMLMEGHSPDVLTYNIVMR 289
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQP 343
KLD+ + DEM + G++P + TY+ L ++ G++ LL M +GC P
Sbjct: 290 AKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAALNLLNYMSDVGCVP 349
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ + LI SR ++E+ + G PD YT +I +LEEA + +
Sbjct: 350 SVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLF 409
Query: 404 MEMKEKQLLPEPKT 417
+M + LP T
Sbjct: 410 DDMLVRGKLPNVYT 423
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM ++G DVV ++ +I+ Y A L + +LFD M G + YN +I L
Sbjct: 376 EMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVG 435
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
A S++K M+ +G PN Y++L+ L A K EA M +G
Sbjct: 436 EFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKYMANKG 486
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
+++G + YN ++K + ++ + +EM + G+S + RT+H +
Sbjct: 168 QQEGYHHSTGMYNLVMKVFAQCGEVKAMWRLLEEMTENGLSISARTFHLLICTCGQAGLR 227
Query: 330 FGLLESMRKMGC---QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
L+E K +P +++ ++ Q+ + V ++ G+ PD +Y +
Sbjct: 228 RRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMLMEGHSPDVLTYNIV 287
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ A ++ GKL++ H+ EM + L P+ T +L
Sbjct: 288 MRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNIL 322
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 157/314 (50%), Gaps = 11/314 (3%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
L+ +C + +V A++ F + + L+S +C+ + A ++ ++
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328
Query: 167 VFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
P NT ++N +++ C N I ++ + R+ + +G+ DV +F+ +I ++N
Sbjct: 329 CSP-NTVTYNTLISALCKENEIEAATDLARILV---SKGLLPDVCTFNTLIQGLCLSKNQ 384
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +F++MK G + D Y+ +I +L R +K+A+ L+K ME G A N V YN+L
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
I LCK+R++++A + FD+M G+S + TY+ +D + + EE L++ M G
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY L+ F R + ++ NG PD +Y LI L G+++ A +
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564
Query: 402 YYMEMKEKQLLPEP 415
++ K ++ P
Sbjct: 565 LLRSVQMKGIVLTP 578
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 120/237 (50%), Gaps = 4/237 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S +++NG+C G EA R +E+S+ G D V+F+ +++ + + N++ L + D
Sbjct: 230 SVKVLVNGFCKE-GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + D YN++I + K + AI +++ M + +PN VTYN+LI LCK +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
++ A ++ +G+ P + T++ + + + + + E M+ GC+P TY +
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
LI R+ + E+ +G + Y LI L + ++E+A + + +M+
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 162/393 (41%), Gaps = 43/393 (10%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
L S H T++ L + FD+ L+ +++ + P+ T TL I+
Sbjct: 43 LCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATL---IQS 99
Query: 113 YCAVHDVGR--------------------AINAFYAYKRFKFA-------------VGIE 139
+ H++ A+NA + K + +
Sbjct: 100 FTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVS 159
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
F L+ ALC+ ++ A ++ N + P + +F ++ G+ G A ++
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKP-DEITFTTLMQGFIEE-GDLNGALKMKK 217
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M G VS +++ + K + + LR ++ G D+ +N++++ +
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V DA+ ++ M EKG P+V TYNSLI +CK + ++A + +M+ R SP TY+
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337
Query: 318 AFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + E+ + R + G P T+ LI+ + +++ E+
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
G PD +Y+ LI +L +L+EA EM+
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 169/397 (42%), Gaps = 79/397 (19%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y+++I+ + K+ +F+ A ++ +M E P+ VT TL I C +
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL---ISALCKEN 347
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPF 170
++ A + + F L+ LC KN QD MF C D F +
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN-QDIAMEMFEEMKNKGCKPDEFTY 406
Query: 171 ------------------------------NTKSFNIILNGWCNIIGSSR--EAERVWME 198
N +N +++G C S R +AE ++ +
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK---SRRIEDAEEIFDQ 463
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ V+++ +I K + + + +L DQM G++ D+ YN+++ +
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++ A ++++M G P++ TY +LI LC+A ++D A + + +GI + T HA
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI---VLTPHA 580
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +I+ +F MRK R ++ +F+ E+ E + P
Sbjct: 581 YNPVIQA---LF-----MRK------------------RTKEGMRLFR---EMMEKSDPP 611
Query: 379 DRSSYTALIHALF-LNGKLEEAHQYYMEMKEKQLLPE 414
D ++ + L G ++EA + +EM EK +LPE
Sbjct: 612 DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPE 648
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
++ G + +F+ +I ++ + +L++ + +G + D YN ++AL +
Sbjct: 80 QLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDN 137
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+K L M +G+ +V T+N LIK LCKA +L A +EM G+ P T+
Sbjct: 138 KLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFT 197
Query: 318 AFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ ++ G L+ ++M GC TN + +L+ F + + + E+SE
Sbjct: 198 TLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEE 257
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G PD+ ++ +L++ G + +A M EK P+
Sbjct: 258 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 43/263 (16%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ SG A + Y+T+I L K R+ + A + D+M L+ + R
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME--------------LLGVSRSSVT 475
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ L+ LC+ K V++A LM + + P + +
Sbjct: 476 YNT------------------------LIDGLCKNKRVEEASQLMDQMIMEGLKP-DKFT 510
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +L +C +G +A + M+ G D+ ++ +I +A + +L +
Sbjct: 511 YNSLLTYFCR-VGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 569
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK-ARK 293
+ GI YN VI AL + K+ + L + M EK P+ +T+ + + LC
Sbjct: 570 QMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629
Query: 294 LDEARQAFDEMLQRGISPTIRTY 316
+ EA EML++GI P ++
Sbjct: 630 IQEAIDFTVEMLEKGILPEFPSF 652
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 183/428 (42%), Gaps = 44/428 (10%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA-- 86
++ L +++ N+ E FF W +QS Y + ++ +L F A
Sbjct: 67 MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 126
Query: 87 --LIDEMRGGETGP-----------------SLVTKQTLLILIRRYCAVHDVGRAINAFY 127
LI E E G S TLL+ + + + AF
Sbjct: 127 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAK------LNMGFVAFL 180
Query: 128 AYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNG 181
Y+R F +G D++ +++ALC+ VQ AE MFC K + F +T ++
Sbjct: 181 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE--MFCCKVLRLGFGLDTHVCTSLVLA 238
Query: 182 WC--NIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
C + +G EA RV+ +MS+ C + V++S +I +A L + +L +M G
Sbjct: 239 NCRRDDLG---EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 295
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + Y +I A + A+ ++ M K PNV TY LI LC+ K++EA
Sbjct: 296 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 355
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F +ML+ G+ P I T++A ++ + G F LL M K C+P TY L++
Sbjct: 356 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 415
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R + F + + +NG PDR +Y L+ G+L A + M L P+
Sbjct: 416 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDG 475
Query: 416 KTDELLQD 423
T L D
Sbjct: 476 FTFTALID 483
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 161/395 (40%), Gaps = 43/395 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G STR Y +I + D A ++DEM P++ T ILI R C
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV---HTYTILIDRLCREG 349
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFN 176
+ A F + GI F L++ C+ V A L+ K N +++N
Sbjct: 350 KIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYN 409
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + S +A + + G+ D V+++ ++ + K L+ +F+ M
Sbjct: 410 ELMEGLCRV-SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--- 293
G+E D + A+I L K ++ A ++ SM +KG++ + VT+ +LI CK K
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 528
Query: 294 --------------------------------LDEARQAFDEMLQRGISPTIRTYHAFLD 321
L+EA +M++ G+ P++ T+ ++
Sbjct: 529 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 588
Query: 322 I-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
R GE L LE M++ GC P TY ++I + + +S G P
Sbjct: 589 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 648
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +Y L+ A G+L+ A Q M + P
Sbjct: 649 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 683
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++G C + G +A + M ++GI D V+F+ +I + K V LF+
Sbjct: 477 TFTALIDGLCKL-GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFEN 535
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M +N + AL K + +A +++ M + G+ P+VVT+ LI+ C+A +
Sbjct: 536 MVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGE 595
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ + + M Q G SP + TY ++ + G EE +L SM G P + TY +
Sbjct: 596 TALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAV 655
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
L+K + + F++ + + +NG P+ Y+AL+ L+
Sbjct: 656 LVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 698
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 41/383 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
R+D AF F K+ ++ Y +I L + + + A+ L EM PS
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS-- 299
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+T +LI+ C D+G A
Sbjct: 300 -TRTYTVLIKAKC---DIGMTDKAMKMLDEMA---------------------------- 327
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K P N ++ I+++ C G EA V+ +M + G+C +++F+ +I+ Y K
Sbjct: 328 --TKACVP-NVHTYTILIDRLCRE-GKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 383
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ +L M++ + + + YN ++ L + A L++ + + G+ P+ VTY
Sbjct: 384 GWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTY 443
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
N L+ CK +L+ A F+ M G+ P T+ A +D + + G E+ G+L SM K
Sbjct: 444 NILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK 503
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G T+ LI + + +V ++ + EN ++ + AL + KL E
Sbjct: 504 KGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNE 563
Query: 399 AHQYYMEMKEKQLLPEPKTDELL 421
A+ +M + L+P T +L
Sbjct: 564 ANAMLGKMMKYGLVPSVVTHTIL 586
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 179/479 (37%), Gaps = 56/479 (11%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
+ + W + L ++ + R Y+ ++ L +V K A+ L+ + P
Sbjct: 379 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 438
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
VT IL+ +C + A N F + F L+ LC+ ++ A
Sbjct: 439 DRVTYN---ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495
Query: 159 HLMFCN-KDVFPFNTKSFNIILNGWCNIIGSSR--------------------------- 190
++ K + +F +++G C I G ++
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKI-GKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554
Query: 191 --------EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
EA + +M + G+ VV+ + +I + +A L++ ++MK+ G +
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +I+ L V++A +++ SM GV+PN TY L+K KA +LD A Q
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
M++ G P Y A L G + S +G + + T + + S
Sbjct: 675 TMVKNGCQPNSHIYSALLS---------GFVLSNTAIGARALSSTGDLDARSLSSEENDN 725
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
N NEI + G P Y L+ L G++ EA Q +M + L P+ +++
Sbjct: 726 NCLS--NEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIE 782
Query: 423 DWS----YNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
+ Y+ ++ P VI ++ R Q +VRH G
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGI 841
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 161/370 (43%), Gaps = 26/370 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I +L K D A+ L +EM+ P + T ILI +C V +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT---ILIDSFCKVGLL 531
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+A F R A + + L+ A + + + A L M ++ P N ++
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTA 590
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSKA 221
+++G C G +A +++ M DV ++ ++ KA
Sbjct: 591 LIDGHCKS-GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + L D M G E + VY+A+I K + +A + M E+G PNV TY
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
+SLI L K ++LD A + ML+ +P + Y +D + + G +E + L+ M +
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC P TY +I F + + ++ ++ G P+ +Y LI+ G L++
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 399 AHQYYMEMKE 408
AHQ EMK+
Sbjct: 830 AHQLLDEMKQ 839
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 200/514 (38%), Gaps = 89/514 (17%)
Query: 1 AKTLVDILRE----FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 56
A + D++R F HK + + E K++ LV +VLS V+N E FF+WAG
Sbjct: 98 AVLISDVIRNTGDGFGHKTQKFLRQFRE---KLNETLVVDVLSLVKNP-ELGVKFFIWAG 153
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-- 114
+Q GY H+ YH ++ +LG + E+R + + + L +LIR+ C
Sbjct: 154 RQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKE---ILGKLLNVLIRKCCRN 210
Query: 115 -----AVHDVGRAINAFYAYKRFKFAVGIEDF---QGLLSALCRYKNVQDA--------- 157
A+ ++GR + Y R + + F L +A ++ + D+
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 158 --------------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
E L K+ F +T + +++G C EA M
Sbjct: 271 GCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCE-ASLFEEAMDFLSRMRSSS 329
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+VV++ ++ + R L + R+ M G R+++N++IHA + A
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 264 SLMKSMEEKGVAPNVVTYNSLI-------------------------------------- 285
L+K M + G P V YN LI
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449
Query: 286 ---KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKM 339
+ LC A K ++A EM+ +G P TY + ++ +V F L E M+
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P TY +LI F + K ++E+ +G P+ +YTALIHA K+ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
++ + M + +P T L D +E+
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F +T +++ ++ CN A ++ EM + DV +++ +I + K L +
Sbjct: 476 FIPDTSTYSKVIGLLCNA-SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ FD+M R G + Y A+IHA K R + A L + M +G PNVVTY +LI
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 288 LCKARKLDEARQAFDEMLQRGIS------------------PTIRTYHAFLDIIRTG--- 326
CK+ ++++A Q + M RG + P I TY A +D +
Sbjct: 595 HCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+E LL+ M GC+P + Y LI F + + V+ ++SE G GP+ +Y++L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
I LF + +L+ A + M E P
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAP 739
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 165/374 (44%), Gaps = 36/374 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y +I K RK +A L + M P++VT L I +C
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL---IDGHCKSG 599
Query: 118 DVGRAINAFYAYKR-----------FKFAVG------IEDFQGLLSALCRYKNVQDAEHL 160
+ +A YA R FK G I + L+ LC+ V++A L
Sbjct: 600 QIEKACQ-IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 161 MFCNKDVFPF-----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ DV N ++ +++G+C + G EA+ V+ +MS+RG +V ++S +I
Sbjct: 659 L----DVMSVEGCEPNHIVYDALIDGFCKV-GKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + L L++ +M + +Y +I L K +A LM MEEKG
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGL 332
PNVVTY ++I KA K+D+ + +M +G +P TY ++ ++ L
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L+ M++ Y +I+ F+ R+F + +EI+EN P +Y LI +
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 393 NGKLEEAHQYYMEM 406
G+LE A + + M
Sbjct: 892 AGRLELALELHKXM 905
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 134/301 (44%), Gaps = 29/301 (9%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC V +A L+F + V P + ++ I+++ +C + G ++A + +
Sbjct: 483 YSKVIGLLCNASKVDNA-FLLFEEMKSNHVVP-DVFTYTILIDSFCKV-GLLQQARKWFD 539
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + G +VV+++ +I Y KAR + LF+ M G + Y A+I K
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 258 LVKDAISLMKSMEEKGVA------------------PNVVTYNSLIKPLCKARKLDEARQ 299
++ A + M +G A PN+ TY +L+ LCKA K+ EAR
Sbjct: 600 QIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
D M G P Y A +D + G +E + M + G P TY LI +
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ KV + + EN P+ YT +I L GK +EA++ M+EK P
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777
Query: 417 T 417
T
Sbjct: 778 T 778
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 188/415 (45%), Gaps = 44/415 (10%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
L+ V+N A + F+ A QSG + R Y TMI L K + D A +L +EM+
Sbjct: 321 LNKVKN---AKYVFYSMA--QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT +L I C H + RAI K + + LL ALC+ +++A
Sbjct: 376 PDIVTYTSL---IDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 432
Query: 158 EHLMFCNKDV---FPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ F + + + N +++N+++NG C ++ G EA + +M +G D ++F
Sbjct: 433 KE--FFQRLLVKGYHLNVQTYNVMINGLCKADLFG---EAMDLKSKMEGKGCMPDAITFK 487
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKV----YNAVIHALAKGRLVKDAIS---- 264
II + K ++ +M G++ RKV V+ + K + D ++
Sbjct: 488 TIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTL 547
Query: 265 ---------------LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ SM + GV PNV Y +I LCK + +DEA F+EM + +
Sbjct: 548 MDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNM 607
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P I TY + +D + E LL+ M++ G QP +Y +L+ + + +
Sbjct: 608 FPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE 667
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ + G + YTA+I+ L G +EA +M++K +P+ T +++
Sbjct: 668 IFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDII 722
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 4/280 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + N ++ G C G ++A ++ +G + VS+ +I+ K V RL
Sbjct: 132 NAITLNTLIKGLC-FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARL 190
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+++ ++ D +YN +IH+L K +L+ DA L M KG++PNVVTYN+L+ C
Sbjct: 191 LRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCI 250
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDT 347
L EA +EM + I+P + T++ +D + ++ +L M K +P T
Sbjct: 251 MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT 310
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI + + N V+ ++++G P+ +YT +I L ++EA + EMK
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
K ++P+ T L D +ER IA K + Q Q
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 165/384 (42%), Gaps = 33/384 (8%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+I LGK K A ++ M P +VT +L I Y ++ V A FY
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL---IDGYFFLNKVKNAKYVFY 332
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + + ++ LC+ K V +A L K++ P + ++ +++G C
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIP-DIVTYTSLIDGLCKN 391
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
R A + +M ++GI DV S++ ++ K L F ++ G + +
Sbjct: 392 HHLER-AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQT 450
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ L K L +A+ L ME KG P+ +T+ ++I L + + D+A + EM+
Sbjct: 451 YNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMI 510
Query: 306 QRG-----------------------ISPTIRTYHAFLD---IIRTGEEVFGLLESMRKM 339
RG I P + TY +D ++ + + SM +M
Sbjct: 511 ARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQM 570
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P Y ++I + + ++ E+ P+ +YT+LI AL N LE A
Sbjct: 571 GVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERA 630
Query: 400 HQYYMEMKEKQLLPEPKTDELLQD 423
EMKE + P+ + +L D
Sbjct: 631 IALLKEMKEHGIQPDVYSYTILLD 654
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 172/396 (43%), Gaps = 31/396 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + A L EM P++VT L + +C + + A +
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNAL---VYGFCIMGHLKEAFSLLN 262
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNII 186
K + F L+ AL + ++ A+ ++ K + ++N +++G+ +
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY-FFL 321
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+ A+ V+ M+Q G+ +V +++ +I K + + + + LF++MK + D Y
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I L K ++ AI+L K M+E+G+ P+V +Y L+ LCK +L+ A++ F +L
Sbjct: 382 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV 441
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G ++TY+ ++ + + E L M GC P T+ +I +
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501
Query: 364 VFKVWNEISENG-----------------------NGPDRSSYTALIHALFLNGKLEEAH 400
K+ E+ G PD +Y L+ FL +L+ A
Sbjct: 502 AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+ M + + P + ++ D K+ V+ ++
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 144/296 (48%), Gaps = 18/296 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY + + Y+ MI L K F A L +M G P +T +T++ CA+ +
Sbjct: 443 GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII------CALFEK 496
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A + A G+++ + + R K + +M K + ++ ++
Sbjct: 497 DENDKAEKILREM-IARGLQEARKV-----RLKEAKIVLAVM--TKACIKPDVVTYGTLM 548
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+ ++ + A+ V+ M+Q G+ +V ++ +I K + + + + LF++MK +
Sbjct: 549 DGY-FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNM 607
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ Y ++I AL K ++ AI+L+K M+E G+ P+V +Y L+ LCK+ +L+ A++
Sbjct: 608 FPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE 667
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
F +L +G ++ Y A ++ + + G +E L M GC P T+ ++I
Sbjct: 668 IFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIII 723
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F+ I+S ++ V+ LF + + G D N +++ + A S++ ++
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE- 328
++G PN +T N+LIK LC ++ +A D+++ +G +Y ++ + +TGE
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 329 -VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
V LL + +P Y +I + + G+ +++E+ G P+ +Y AL+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + G L+EA EMK K + P+ T L D
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 166/365 (45%), Gaps = 11/365 (3%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF WA K+ Y H T Y +I L V ++ W +I EM +VT L ++
Sbjct: 1099 FFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSDVV 1156
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDV 167
R V +AI FY K K + + ++ L +Y+ V + M
Sbjct: 1157 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 1216
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP +T +++ +++ +C + G A ++ EM + G+ ++ +I+ + K + H
Sbjct: 1217 FP-DTVTYSALISAFCKL-GRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L LF++M+ D Y +I L K + +A M+ +G P+ V N++I
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQP 343
L KA +LD+A + F EM P++ TY+ + + EV E M++ G P
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
++ TY +LI F + + + E+ E G P ++Y +LI AL + + A + +
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454
Query: 404 MEMKE 408
E+KE
Sbjct: 1455 QELKE 1459
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 160/358 (44%), Gaps = 15/358 (4%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L++EM+ E G TK +LI + +D A++
Sbjct: 1220 TVTYSALISAFCKLGRRDSAIQLLNEMK--EIGMQPTTK-IYTMLIALFFKFNDAHGALS 1276
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
F + + + L+ L + + +A H FC ++ + + +N N
Sbjct: 1277 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHF-FC--EMQREGCRPDTVFMNNMIN 1333
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQMKRMGI 239
+G + +A +++ EM VV+++ II SK+R +V F++MK GI
Sbjct: 1334 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRA-SEVPSWFERMKESGI 1392
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y+ +I K ++ A+ L++ M+EKG P Y SLI L KA++ D A +
Sbjct: 1393 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 1452
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F E+ + S + R Y + + + G ++ + + M K+GC P Y L+ +
Sbjct: 1453 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 1512
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + E+G PD +SY +++ L G A + MK+ + P+
Sbjct: 1513 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 1570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 153/359 (42%), Gaps = 17/359 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G +T+ Y +IA+ K A +L +EMR P + T L IR
Sbjct: 1247 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTEL---IRGLGKA 1303
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
+ A + F +R +++ L + + DA L + C V +
Sbjct: 1304 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 1363
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT I+ + E + M + GI ++S +I + K + K + L
Sbjct: 1364 NT-----IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 1418
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++M G Y ++I AL K + A L + ++E + + Y +IK L K
Sbjct: 1419 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 1478
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A +LD+A FDEM + G +P + Y+A + + RTG +E + M++ GC P ++
Sbjct: 1479 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 1538
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +++ ++ ++ + + ++ PD SY ++ AL G EEA + EM
Sbjct: 1539 YNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 198 EMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + IC S ++ A+ + + + +F Q+K + + YN++I L
Sbjct: 1138 EMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHE 1197
Query: 257 RLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ L M +G P+ VTY++LI CK + D A Q +EM + G+ PT +
Sbjct: 1198 GQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKI 1257
Query: 316 YHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y + + + G L E MR C+P TY LI+ + + + + E+
Sbjct: 1258 YTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 1317
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD +I+ L G+L++A + + EM+ + +P
Sbjct: 1318 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP 1358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 144/352 (40%), Gaps = 60/352 (17%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR++ + +EL+ + R D A+ FF ++ G T + MI LG
Sbjct: 1280 EMRHQYCRPDVFTYTELIRGLGKAGRID--EAYHFFCEMQRE-GCRPDTVFMNNMINFLG 1336
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K + D A L EM PS+VT T++ + RA ++R K +
Sbjct: 1337 KAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKAL-----FESKSRASEVPSWFERMKES- 1390
Query: 137 GIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
GI + L+ C+ ++ A +M + + K F +C++I + +A
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKA--MMLLEE----MDEKGFPPCPAAYCSLIDALGKA 1444
Query: 193 ER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+R ++ E+ + ++ +I KA L + +FD+M ++G D Y
Sbjct: 1445 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 1504
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKG--------------------------------- 273
NA++ LA+ ++ +A+S M+ M+E G
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564
Query: 274 --VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
V P+VV+YN+++ L A +EA + EM G + TY + L+ I
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 1616
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 3 TLVDILREFSHKRSEMRN---KIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGK 57
T++ L E + SE+ + +++E GI SS S ++ N E A L
Sbjct: 1365 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAM-MLLEEMD 1423
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y ++I LGK +++D A L E++ G S + + ++I+
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSS--SARVYAVMIKHLGKAG 1480
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ AIN F D + + C DV+ ++N
Sbjct: 1481 RLDDAINMF-----------------------------DEMNKLGCAPDVY-----AYNA 1506
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G G EA M + G D+ S++ I++ +K H+ + + MK+
Sbjct: 1507 LMSGLART-GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 1565
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ D YN V+ AL+ + ++A LMK M G +++TY+S+++ + K
Sbjct: 1566 TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT------GEEVF 330
+ TY +LI L + E + EM++ I + T D++R +
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI--CVVTPTELSDVVRMLGNAKMVRQAI 1169
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHA 389
+ ++ CQP Y +I Q+ V +++NE+S G+ PD +Y+ALI A
Sbjct: 1170 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISA 1229
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+ + A Q EMKE + P K +L
Sbjct: 1230 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTML 1261
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N+ILN + + + ++ M GI D +++ +I+C + + +F+
Sbjct: 70 TYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFED 129
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK MG D+ YN ++ K R +K+AI +++ ME G +P++VTYNSLI +
Sbjct: 130 MKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGL 189
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
L+EA + ++M++RGI + TY A L +RTG E + E MR GC+P T+
Sbjct: 190 LEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNA 249
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK +F + KV+ EI PD ++ L+ NG E + EMK
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVG 309
Query: 411 LLPEPKT-DELLQDWSYNKQF 430
+PE T + L+ +S F
Sbjct: 310 FVPERDTYNTLISAYSRCGSF 330
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 6/266 (2%)
Query: 177 IILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ N ++ G SR EA V EM G +V+++ +IS Y++ L + + L +Q
Sbjct: 140 VTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQ 199
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M GI+ D Y A++ + + A+ + + M G PN+ T+N+LIK K
Sbjct: 200 MVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGK 259
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIM 350
E + F+E+ P I T++ L + EV G+ + M+++G P DTY
Sbjct: 260 FAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNT 319
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI +SR F ++ + + G PD S+Y A++ AL G E++ + EM++
Sbjct: 320 LISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGM 379
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIA 436
P T L N + + R +A
Sbjct: 380 CKPNELTHCSLLHAYANGKEIGRMLA 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 196/471 (41%), Gaps = 83/471 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+ Y+T++ + GK R+ A ++ EM PS+VT +L+ R +
Sbjct: 131 KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 117 HDV----------GRAINAF-YAYKRFKFAVGIED------FQGLLSALCRYKNVQDAEH 159
+ G ++ F Y F +D F+ + +A C+ N+
Sbjct: 191 EEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK-PNICTFNA 249
Query: 160 L--MFCNKDVFPFNTKSFNII--------LNGWCNII------GSSREAERVWMEMSQRG 203
L M N+ F K F I + W ++ G E V+ EM + G
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVG 309
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ +++ +IS YS+ + + + ++ +M GI D YNAV+ ALA+G L + +
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 264 SLMKSMEEKGVAPNVVTYNSLI----------------KPLC------------------ 289
++ M++ PN +T+ SL+ + +C
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVN 429
Query: 290 -KARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-------IRTGEEVFGLLESMRKMGC 341
K L EA +AF E+ ++G SP + T +A + I +T E +L M++ G
Sbjct: 430 SKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNE----ILNFMKESGF 485
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P+ TY L+ S+ F +V EI G PD SY +I A NG+++EA
Sbjct: 486 TPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASH 545
Query: 402 YYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER--QIASLKAHQPQSGQNT 449
+ EM+E L+P+ T + + ++ + F E + + H + QNT
Sbjct: 546 IFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNT 596
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 168/376 (44%), Gaps = 28/376 (7%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTR 66
K +EM EE IK+ V ++++W +N ++ + K+ G+
Sbjct: 259 KFAEMMKVFEE--IKICC-CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERD 315
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T+I+ + FD A A+ M P L T +L + R + + I A
Sbjct: 316 TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR-GGLWEQSEKILA- 373
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-----FCNKDVFPFNTKSFNIIL-N 180
+ + + S L Y N ++ ++ C+ + P ++L N
Sbjct: 374 ----EMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVN 429
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
C+++ EAER ++E+ ++G D+ + + +I+ Y + + + K + + MK G
Sbjct: 430 SKCDLL---LEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFT 486
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YN++++ ++ + + ++K + KG+ P++++YN++I C+ ++ EA
Sbjct: 487 PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F EM + G+ P + TY+ F+ EE ++ M K GC+P +TY +I + +
Sbjct: 547 FSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606
Query: 358 WRQFGNVFKVWNEISE 373
+ + K + + E
Sbjct: 607 LNRRDDAIKFISSLHE 622
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ II+ K + L + + + G E D Y ++I A ++A+ + K MEE
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 272 KGVAPNVVTYNSLIKPLCK-ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+G P ++TYN ++ K ++ F+ M GI P TY+ + R G E
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + E M+ MG P TY L+ + + R+ +V E+ NG P +Y +LI
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 388 HALFLNGKLEEAHQYYMEMKEKQL 411
A +G LEEA + +M E+ +
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGI 205
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 173/413 (41%), Gaps = 48/413 (11%)
Query: 17 EMRNKIEECGIKVSSELVSEVLS-WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
E++N++ E GIK+ + +LS +VR + + + +G + ++ +I +
Sbjct: 195 ELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMH 254
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G KF + +E++ P +VT TLL + + +V F KR F
Sbjct: 255 GNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS---GVFKEMKRVGFV 311
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ + L+SA R + A + + + P + ++N +L G ++E
Sbjct: 312 PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITP-DLSTYNAVLAALARG-GLWEQSE 369
Query: 194 RVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVL------------------------ 228
++ EM Q G+C + ++ ++ Y+ + + ++L
Sbjct: 370 KILAEM-QDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLV 428
Query: 229 -----------RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
R F ++KR G D NA+I + ++V ++ M+E G P+
Sbjct: 429 NSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPS 488
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLE 334
+ TYNSL+ ++ + + + E+L +GI P I +Y+ + R G +E +
Sbjct: 489 LATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFS 548
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
MR+ G P TY + ++ F V + ++G P++++Y ++I
Sbjct: 549 EMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVI 601
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I+ L K V A SL+ ++ + G P+V Y SLI + EA F +M + G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 309 ISPTIRTYHAFLDII-RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
PT+ TY+ L++ + G ++ GL E M+ G P TY LI R +
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT------- 417
V+ ++ G PD+ +Y L+ + +++EA + EM+ P T
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183
Query: 418 ---DELLQD-WSYNKQFVERQI 435
D LL++ Q VER I
Sbjct: 184 YARDGLLEEAMELKNQMVERGI 205
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 172/387 (44%), Gaps = 13/387 (3%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
ND + A + F +Q+ + E++ ++ L K + + T L +M P+LV
Sbjct: 65 NNDVDDAVSLFNCLLRQNPTPPAI-EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLV 123
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
ILI +C + + A + F + + F L+ LC + A L
Sbjct: 124 NCN---ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA--LN 178
Query: 162 FCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
F +K V F FN S+ +++G C + G +R A + + + + +VV +S II
Sbjct: 179 FHDKLVALGFQFNQISYGTLIDGLCKV-GETRAALDLLRRVDGKLVQPNVVMYSTIIDGM 237
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K ++++ L+ +M GI + Y+A+I +KDA+ L M + + P+V
Sbjct: 238 CKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDV 297
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLES 335
T+N L+ CK+ K+ A + DEM RG P I TY + LD + V LL
Sbjct: 298 YTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTK 357
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
++ G +P TY +LI + + ++ ++ G +Y + + G
Sbjct: 358 LKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGL 417
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+EA +M+E +P+ KT EL++
Sbjct: 418 FDEASALLSKMEENGCIPDAKTYELIK 444
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 131/256 (51%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + NI++N +C + G A V+ ++ + G + ++F+ +I +H+ L
Sbjct: 121 NLVNCNILINCFCQL-GLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D++ +G + ++ Y +I L K + A+ L++ ++ K V PNVV Y+++I +CK
Sbjct: 180 HDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK 239
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDT 347
+ +++A + EM+ +GISP + TY A + + ++ L M +P T
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ +L+ F + + K+ +E+ + G P+ +Y++++ AL ++++A ++K
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 408 EKQLLPEPKTDELLQD 423
++ + P T +L D
Sbjct: 360 DQGIRPNMHTYTILID 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 38/255 (14%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+++ +S + + ++ + LF+ + R +N ++ +L K + + L
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY---------- 316
K ME +G+ PN+V N LI C+ + A F ++L+ G +P T+
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170
Query: 317 ---HAFLDI-------------IRTGEEVFGL---------LESMRKMG---CQPTNDTY 348
H L+ I G + GL L+ +R++ QP Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+I + + + F +++E+ G P+ +Y+ALI F GKL++A + +M
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290
Query: 409 KQLLPEPKTDELLQD 423
+ + P+ T +L D
Sbjct: 291 ENIKPDVYTFNILVD 305
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 164/380 (43%), Gaps = 30/380 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y+T+I + + + A EMR P L+T +L I YC
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL---INGYCKA 385
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
++ A+ F KR A + + LL CR ++++A C DV
Sbjct: 386 GNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDV--- 442
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWM------EMSQRGICYDVVSFSCIISCYSKARNL 224
++ I++NG SR+ + M EM +G+ D +++ IS +
Sbjct: 443 --STYTILMNG-------SRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGST 493
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +L + M GI D YN + L K +KDA L M G+ P+ +TY L
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGC 341
I C+ +L EAR FD ML G+ P+ TY F+ R G +G + M + G
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY +LI R + ++ ++E+ E G P++ +YT LI G EEA +
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673
Query: 402 YYMEMKEKQLLPEPKTDELL 421
Y EM + + P+ T L
Sbjct: 674 LYSEMHQHGIHPDHCTHNAL 693
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 169/363 (46%), Gaps = 33/363 (9%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF- 134
G V K A AL EM P++VT T+ +H + R+ N A R KF
Sbjct: 316 GSVEK---AGALQLEMENEGIVPTVVTYNTI---------IHGMFRSGNVEAA--RMKFV 361
Query: 135 ---AVGIED----FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
A+G+ + L++ C+ N+++A L + + ++NI+L+G+C +
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL- 420
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA R EM ++G DV +++ +++ K RNL V FD+M G++ D Y
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N I A +A L + M +G++ + VTYN + LCK+ L +A + +M+
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540
Query: 307 RGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
G+ P TY + +R ++F + M G P+ TY + I + R
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIF---DGMLVSGLPPSAVTYTVFIHAYCRRGN 597
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ + + ++ E G P+ +Y LIHAL G+ A+Q++ EM E+ L P T L
Sbjct: 598 LYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTL 657
Query: 421 LQD 423
L D
Sbjct: 658 LID 660
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 152/361 (42%), Gaps = 46/361 (12%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
PS+VT TLL R V + + A + + +++ L R ++ A
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDV-TYNVVINGLARKGELEKA 287
Query: 158 EHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
L M +K F +FN ++ G+ GS +A + +EM GI VV+++ I
Sbjct: 288 AQLVDRMRMSKKASAF---TFNPLITGYF-ARGSVEKAGALQLEMENEGIVPTVVTYNTI 343
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I ++ N+ F +M+ MG+ D YN++I+ K +K+A+ L ++ G+
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------------- 321
AP+V+TYN L+ C+ L+EAR+ EM+++G P + TY ++
Sbjct: 404 APSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE 463
Query: 322 -------------------------IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
I+ + E F L E M G TY + +
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + + +W ++ +G PD +YT LIHA G+L EA + M L P
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583
Query: 417 T 417
T
Sbjct: 584 T 584
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T ++NI L+G C G+ ++A +WM+M G+ D ++++C+I + + L + +
Sbjct: 511 DTVTYNIFLDGLCKS-GNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDI 569
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD M G+ Y IHA + + A + M E+GV PN VTYN LI LC+
Sbjct: 570 FDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+ + A Q F EML+RG+SP TY +D + G EE L M + G P + T
Sbjct: 630 MGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689
Query: 348 YIMLIKKF 355
+ L K F
Sbjct: 690 HNALFKGF 697
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L F +M G+ K N V+ AL D S+ M + G+ P++VTYN+L+
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 288 LCKARKLDEARQAFDEMLQR--GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
+ ++D+A + EM R G P+ TY+ ++ + R G E+ L++ MR M +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKK 299
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ T+ LI + + E+ G P +Y +IH +F +G +E A
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359
Query: 403 YMEMKEKQLLPE 414
++EM+ LLP+
Sbjct: 360 FVEMRAMGLLPD 371
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 8/212 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+ + L K A+ L +M P +T L I +C +
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL---IHAHCERGRL 563
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F + + A CR N+ A + V P N ++N+
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP-NEVTYNV 622
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C + G + A + + EM +RG+ + +++ +I K N + +RL+ +M +
Sbjct: 623 LIHALCRM-GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQH 681
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
GI D +NA+ +G+ K AI M+++
Sbjct: 682 GIHPDHCTHNALFKGFDEGQ-SKHAIQYMENV 712
>gi|224139118|ref|XP_002326772.1| predicted protein [Populus trichocarpa]
gi|222834094|gb|EEE72571.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 163/362 (45%), Gaps = 16/362 (4%)
Query: 48 AFTFFLWA-GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A FF ++ Q+ ++ S + + IL ++R FD AW L+ E+ G+T P L+T +++
Sbjct: 92 ALEFFKYSLNNQTHFSPSPDSFEKTLHILARMRYFDKAWDLMVEI--GKTHPFLLTLKSM 149
Query: 107 LILIRRYCAVHDVGRAINAFYAYKRFKFA---VGIEDFQGLLSALCRYKNVQDAEHLMFC 163
I++ + ++AF ++ F G+E+F LL A C + +++A+ +
Sbjct: 150 SIMLCKIAKFRSYEETLDAFEKMEKRVFVGRKFGVEEFNVLLRAFCTVRKLKEAKSVFVK 209
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREA---ERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ FP N K+ NI+L G+ SR+ E + EM +RG S+ I Y K
Sbjct: 210 MHERFPPNVKTMNILLLGF----KESRDVTAMELFYHEMVKRGFKPSSSSYGIRIDAYCK 265
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
LR+F++M+R + +IH R A L + ++ + +
Sbjct: 266 KGYFADALRIFEEMERANCLPTLETVTTLIHGAGVARNAMKARELFDEIPKRNLQADTGA 325
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMR 337
YN+LI L K R++ A Q DEM + I TYH FL ++++G E V L M
Sbjct: 326 YNALISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHTMFLGLMKSGSIEGVCELYHKMI 385
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
P T +ML+K F Q +W + G P + L+ L G+
Sbjct: 386 DRNFVPKTRTVVMLMKFFCVNSQIDLGLNLWGYLVGKGYCPHHHALDLLVTGLCSRGRSH 445
Query: 398 EA 399
EA
Sbjct: 446 EA 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 11/238 (4%)
Query: 184 NIIGSSREAERVWMEMSQRGICYDVV----SFSCIISCYSKARNLHKVLRLFDQMKR--- 236
+I+ R ++ W M + G + + S S ++ +K R+ + L F++M++
Sbjct: 118 HILARMRYFDKAWDLMVEIGKTHPFLLTLKSMSIMLCKIAKFRSYEETLDAFEKMEKRVF 177
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+G + + +N ++ A R +K+A S+ M E+ PNV T N L+ ++R +
Sbjct: 178 VGRKFGVEEFNVLLRAFCTVRKLKEAKSVFVKMHER-FPPNVKTMNILLLGFKESRDVTA 236
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ EM++RG P+ +Y +D + G + + E M + C PT +T LI
Sbjct: 237 MELFYHEMVKRGFKPSSSSYGIRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLIH 296
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
R ++++EI + D +Y ALI +L +++ A Q EM++ +
Sbjct: 297 GAGVARNAMKARELFDEIPKRNLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNI 354
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 21/346 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAIL 75
E+ K + G+ + + L + ++ + ++ L+A K+ G Y+ ++ +
Sbjct: 741 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 800
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTL---LILIRRYCAVHDVGRAINAFYAYKRF 132
GK + + + +EM + VT T+ L+ RR + +AI+ +Y
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR------LEQAIDLYYNLMSQ 854
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWCNIIGS 188
F+ + LL L + ++DAE+L ++ + K+ +NI+LNG I G+
Sbjct: 855 GFSPTPCTYGPLLDGLLKAGRIEDAENLF---NEMLEYGCKANCTIYNILLNGH-RIAGN 910
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ + ++ +M +GI D+ S++ II KA L+ L F Q+ MG+E D YN
Sbjct: 911 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L K + +++A+SL M++KG+ PN+ TYNSLI L KA K EA + ++E+L +G
Sbjct: 971 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030
Query: 309 ISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
P + TY+A + + + + + M GC P + TY+ L
Sbjct: 1031 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 135 AVGIEDF--QGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC--NIIGSS 189
+ ++DF L+ LC+ K +A L+ K T +N ++ G N+I
Sbjct: 715 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDI- 773
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
AE ++ EM + G D +++ ++ K+ + ++L++ ++M R G E YN +
Sbjct: 774 --AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 831
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L K R ++ AI L ++ +G +P TY L+ L KA ++++A F+EML+ G
Sbjct: 832 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 891
Query: 310 SPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
Y+ L+ I E+V L + M G P +Y ++I + Q +
Sbjct: 892 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 951
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ E G PD +Y LI L + +LEEA + EM++K ++P
Sbjct: 952 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 998
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 41/361 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y I +LG+ ++FD A+ ++ +M P ++T +LI+ C D
Sbjct: 225 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT---VLIQVLC---DA 278
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
GR +A + + K + D ++ L ++ + D++ +M
Sbjct: 279 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM------------------ 320
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+W M G +VV+++ +I + + + L +FD+MK+ GI
Sbjct: 321 --------------EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 366
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
++ YN++I K DA+ L K M+ G PN T+ I K+ + +A Q
Sbjct: 367 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 426
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFS 356
++ M +GI P + +A L + ++G + ++ MG P TY M+IK S
Sbjct: 427 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 486
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ +F K++ ++ EN PD + +LI L+ G+ +EA + + ++KE L P
Sbjct: 487 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 546
Query: 417 T 417
T
Sbjct: 547 T 547
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 18/277 (6%)
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE + + N +F I G + G R A M + GI + +++ ++
Sbjct: 110 AEVFDVMQRQIVKANVGTFAAIFGGL-GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVY 168
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K+ + L ++ M G+ + Y+ ++ A K R V+ + L++ ME GV P
Sbjct: 169 FLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 228
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVF 330
NV +Y I+ L +A++ DEA + +M G P + T+ + + I ++VF
Sbjct: 229 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 288
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M+K +P TYI L+ KF +V ++WN + +G + +YTA+I AL
Sbjct: 289 ---WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 345
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
G++ EA + + EMK+K ++PE +SYN
Sbjct: 346 CQVGRVFEALEMFDEMKQKGIVPE--------QYSYN 374
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF +MK +G D YN ++ A+ K +++ + + + M KG VTYN++I L
Sbjct: 777 LFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLV 836
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K+R+L++A + ++ +G SPT TY LD +++ G E+ L M + GC+
Sbjct: 837 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 896
Query: 347 TYIMLIKKFSRWRQFGNVFKV---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
Y +L+ + R GN KV + ++ + G PD SYT +I L G+L + Y+
Sbjct: 897 IYNILL---NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 953
Query: 404 MEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
++ E L P+ T LL D + +E ++ Q
Sbjct: 954 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 148/362 (40%), Gaps = 62/362 (17%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIED--FQGLLSALCRYKNVQDAEHL-- 160
L LI+ C +A+ A K+FK F V ++ + L+ L + AE L
Sbjct: 723 LCPLIKHLCKQK---KALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFA 779
Query: 161 ----MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSC 213
+ C D F ++N++L+ +G S E +V EM ++G V+++
Sbjct: 780 EMKELGCGPDEF-----TYNLLLDA----MGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 830
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE-- 271
IIS K+R L + + L+ + G Y ++ L K ++DA +L M E
Sbjct: 831 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 890
Query: 272 ---------------------------------KGVAPNVVTYNSLIKPLCKARKLDEAR 298
+G+ P++ +Y +I LCKA +L++
Sbjct: 891 CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGL 950
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F ++L+ G+ P + TY+ +D + EE L M+K G P TY LI
Sbjct: 951 TYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHL 1010
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + K++ E+ G P+ +Y ALI ++G + A+ Y M LP
Sbjct: 1011 GKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1070
Query: 416 KT 417
T
Sbjct: 1071 ST 1072
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 155/368 (42%), Gaps = 26/368 (7%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+++I L K + D AW + +++ P+ T TLL + R V +V + Y
Sbjct: 514 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY- 572
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGW 182
+ + + +L LC+ V DA +++ C D+ +NT + ++
Sbjct: 573 --HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 630
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF-DQMKRMGIEC 241
N EA ++ +M ++ + D + I+ + K + + L + D + G +
Sbjct: 631 YN------EAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKT 683
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DR ++++ + K ++ +I + + G+ + LIK LCK +K EA +
Sbjct: 684 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 743
Query: 302 DEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ G+S Y++ + ++I E GL M+++GC P TY +L+
Sbjct: 744 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAE---GLFAEMKELGCGPDEFTYNLLLDAM 800
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + + KV E+ G +Y +I L + +LE+A Y + + P P
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860
Query: 416 KTDELLQD 423
T L D
Sbjct: 861 CTYGPLLD 868
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 4/283 (1%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
F LL ALC+ +V++A L + F K F +L GWC G EA+ V +++
Sbjct: 88 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCRE-GKLMEAKYVLVQIR 146
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G D+V ++ +++ Y+ A + L +M+R E + + +I AL + ++
Sbjct: 147 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 206
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A+ + M+ G + VTY +LI CK K+ + + D M+Q+G P TY +
Sbjct: 207 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 266
Query: 321 DIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
EE+ L+E MRK+GC P + Y ++I+ + + +VWNE+ G
Sbjct: 267 AAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLS 326
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
P ++ +IH L EA +++ EM + LL P+ L
Sbjct: 327 PGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTL 369
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 162/406 (39%), Gaps = 72/406 (17%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
S + W R + L +++G+ Y+ ++ K A+ L+ EMR
Sbjct: 122 FTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMR 181
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
E P++++ T LI+ CA + A+ F+ + + L+S C++
Sbjct: 182 RKECEPNVMSFTT---LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWG 238
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ +K + ++ N M Q+G + +++
Sbjct: 239 KI-----------------SKGYELLDN------------------MIQQGHIPNPMTYL 263
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
I++ + K L + + L ++M+++G D +YN VI K +K+ + + ME
Sbjct: 264 HIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEAT 323
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGL 332
G++P + T+ +I R L EA + F EM+ RG+
Sbjct: 324 GLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSA-------------------- 363
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
P T L+ R + VW+ I G + ++T IHALF
Sbjct: 364 ----------PQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFS 413
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIAS 437
NG ++EA Y ++M + ++P+P T +L++ ++ RQIA+
Sbjct: 414 NGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGL---RKLYNRQIAA 456
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V+ ++ AL K VK+A SL + M + P + + SL+ C+ KL EA+ ++
Sbjct: 87 VFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQI 145
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G P I Y+ L G+ V + LL+ MR+ C+P ++ LI+ ++
Sbjct: 146 REAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKM 205
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+V+ E+ G D +YT LI GK+ + ++ M ++ +P P T
Sbjct: 206 EEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 261
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 161/370 (43%), Gaps = 26/370 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I +L K D A+ L +EM+ P + T ILI +C V +
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT---ILIDSFCKVGLL 531
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+A F R A + + L+ A + + + A L M ++ P N ++
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP-NVVTYTA 590
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSKA 221
+++G C G +A +++ M DV ++ ++ KA
Sbjct: 591 LIDGHCKS-GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + L D M G E + VY+A+I K + +A + M E+G PNV TY
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
+SLI L K ++LD A + ML+ +P + Y +D + + G +E + L+ M +
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC P TY +I F + + ++ ++ G P+ +Y LI+ G L++
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 399 AHQYYMEMKE 408
AHQ EMK+
Sbjct: 830 AHQLLDEMKQ 839
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 200/514 (38%), Gaps = 89/514 (17%)
Query: 1 AKTLVDILRE----FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 56
A + D++R F HK + + E K++ LV +VLS V+N E FF+WAG
Sbjct: 98 AVLISDVIRNTGDGFGHKTQKFLRQFRE---KLNETLVVDVLSLVKNP-ELGVKFFIWAG 153
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-- 114
+Q GY H+ YH ++ +LG + E+R + + + L +LIR+ C
Sbjct: 154 RQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKE---ILGKLLNVLIRKCCRN 210
Query: 115 -----AVHDVGRAINAFYAYKRFKFAVGIEDF---QGLLSALCRYKNVQDA--------- 157
A+ ++GR + Y R + + F L +A ++ + D+
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 158 --------------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
E L K+ F +T + +++G C EA M
Sbjct: 271 GCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCE-ASLFEEAMDFLSRMRSSS 329
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+VV++ ++ + R L + R+ M G R+++N++IHA + A
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 264 SLMKSMEEKGVAPNVVTYNSLI-------------------------------------- 285
L+K M + G P V YN LI
Sbjct: 390 KLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVS 449
Query: 286 ---KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKM 339
+ LC A K ++A EM+ +G P TY + ++ +V F L E M+
Sbjct: 450 NLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P TY +LI F + K ++E+ +G P+ +YTALIHA K+ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
++ + M + +P T L D +E+
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 36/374 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + Y +I K RK +A L + M P++VT L I +C
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL---IDGHCKSG 599
Query: 118 DVGRAINAFYAYKR-----------FKFAVG------IEDFQGLLSALCRYKNVQDAEHL 160
+ +A YA R FK G I + L+ LC+ V++A L
Sbjct: 600 QIEKACQ-IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 161 MFCNKDVFPF-----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ DV N ++ +++G+C + G EA+ V+ +MS+RG +V ++S +I
Sbjct: 659 L----DVMSVEGCEPNHIVYDALIDGFCKV-GKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + L L++ +M + +Y +I L K +A LM MEEKG
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGL 332
PNVVTY ++I KA K+D+ + +M +G +P TY ++ ++ L
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L+ M++ Y +I+ F+ R+F + +EI+EN P +Y LI +
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 393 NGKLEEAHQYYMEM 406
G+LE A + + EM
Sbjct: 892 AGRLELALELHKEM 905
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F +T +++ ++ CN A ++ EM + DV +++ +I + K L +
Sbjct: 476 FIPDTSTYSKVIGLLCNA-SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ FD+M R G + Y A+IHA K R + A L + M +G PNVVTY +LI
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 288 LCKARKLDEARQAFDEMLQRGIS------------------PTIRTYHAFLDIIRTG--- 326
CK+ ++++A Q + M RG + P I TY A +D +
Sbjct: 595 HCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+E LL+ M GC+P + Y LI F + + V+ ++SE G GP+ +Y++L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
I LF + +L+ A + M E P
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAP 739
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 29/273 (10%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
DVF ++ I+++ +C + G ++A + + EM + G +VV+++ +I Y KAR +
Sbjct: 514 DVF-----TYTILIDSFCKV-GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA---------- 275
LF+ M G + Y A+I K ++ A + M +G A
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFK 625
Query: 276 --------PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
PN+ TY +L+ LCKA K+ EAR D M G P Y A +D + G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+E + M + G P TY LI + + ++ KV + + EN P+ YT
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I L GK +EA++ M+EK P T
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI L KV K D A+ L+ M P++VT + I + V + +
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAM---IDGFGKAGKVDKCLELMR 800
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF-PFNTKSFNIILNGWCNII 186
A ++ L++ C + DA L+ K + P + + ++ G+
Sbjct: 801 QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---- 856
Query: 187 GSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI--EC 241
+RE + + E+++ + ++ +I + KA L L L +M
Sbjct: 857 --NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAA 914
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D+ +Y+++I +L+ V A L M ++G P + + L+K L + + +EA Q
Sbjct: 915 DKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLS 974
Query: 302 DEMLQ 306
D + Q
Sbjct: 975 DCICQ 979
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 192/440 (43%), Gaps = 49/440 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
S +RN + ++ +L++ + + + F FF + Q + + Y M L
Sbjct: 71 SSIRNVLPSLSVRHVVDLINR--NPLSLPHRSIFAFFKFISSQPEFRFTVETYFVMARFL 128
Query: 76 GKVRKFDTAWALID-------------------EMRGGETGPSLVTKQTLLILIRRYCAV 116
F A +LI+ EMRG LV L+I +
Sbjct: 129 AIHEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMCDFLV--DALMITYMDLGFI 186
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR----------YKNVQDAEHLMFCNKD 166
DV I F ++ F V I LL + + Y + DA
Sbjct: 187 PDV---IQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAG-------- 235
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
FP N FNI++N +C G+ +A++V+ E+++R + VVSF+ +I+ Y K NL
Sbjct: 236 -FPLNVYVFNILMNKFCKE-GNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDV 293
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
RL M++ D Y+A+I+AL K + A L M E+G+ PN V + +LI
Sbjct: 294 GFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIH 353
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQP 343
+ ++D ++++ +ML +G+ P I Y+ ++ + G+ V +++ M + G +P
Sbjct: 354 GHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LI F R ++ E+ +NG DR ++ALI + G++ +A +
Sbjct: 414 DKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERAL 473
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM + P+ T ++ D
Sbjct: 474 REMLRAGMKPDDVTYTMMMD 493
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 48/348 (13%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A + DE+ P++V+ TL I YC V ++ + ++ + + +
Sbjct: 259 AQKVFDEITKRSLRPTVVSFNTL---INGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSA 315
Query: 144 LLSALCRYKNVQDAEHLMF---CNKDVFP----FNT------------------------ 172
L++ALC+ +N D H +F C + + P F T
Sbjct: 316 LINALCK-ENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSK 374
Query: 173 ------KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+N ++NG+C G A + M +RG+ D V+++ +I + + ++
Sbjct: 375 GLQPDIVLYNTLVNGFCKN-GDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDT 433
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L + +M + GIE DR ++A+I + K V DA ++ M G+ P+ VTY ++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMD 493
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQP 343
CK + EM G P + TY+ L+ + + G+ LL++M +G P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVP 553
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ TY L++ R N K + + E G D +SY +L++ L+
Sbjct: 554 DDITYNTLLEGHHRH---ANASKHYKQKPEIGIVADLASYKSLVNELY 598
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 195/433 (45%), Gaps = 21/433 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S Y MI L + A L+++M P++V TL++ + + R +
Sbjct: 149 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGW 182
+ A I + ++S L + +++A +L+ + +F + G+
Sbjct: 209 DGMSCSG---VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 265
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G EA + + EM G+ + ++ +I+ + KA NL + L +F + +G+ D
Sbjct: 266 SKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ +A IH L K V++A+ + ++EKG+ P+V TY+SLI CK ++++A + D
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM +GI+P I Y+A +D + ++G+ L + M + G +P + TY +I + +
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
F +++E+ G P Y AL+H G +E+A + EM +K +
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT 504
Query: 420 LLQDWSYN------KQFVERQIASLKAHQPQSGQNTRVI-----SKKSDQDREFLQQPET 468
L+ + + Q + IA K P T VI + K ++ ++ +
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIA--KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 562
Query: 469 RRVVRHQGFSFWE 481
R ++ F+ +E
Sbjct: 563 RNLIVDTVFALFE 575
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 14/364 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y + A L + ++ + A +EM+ P L+ R +
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTK 173
+V R + + + + + L+ LC++ ++ A ++ K + N++
Sbjct: 63 EVLRIKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEIL---KGMITLGCKPNSR 116
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++ G+C R E + EM +R + VS+ +I+ ++L +L ++
Sbjct: 117 TFCLLIEGYCREHNMGRALE-LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 175
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G++ + VY+ +I A +++A L+ M GVAP++ YN++I L KA K
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
++EA E+ RG+ P T+ AF L +TG+ E + M G P N Y +
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + ++ + G PD + +A IH L NG+++EA + + E+KEK
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355
Query: 411 LLPE 414
L+P+
Sbjct: 356 LVPD 359
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 151/359 (42%), Gaps = 66/359 (18%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFN 176
V A+ F K + + L+S C+ V+ A H C K + P N +N
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP-NIFIYN 399
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G C G + A +++ M ++G+ D V++S +I Y K+ N+ + LF +M
Sbjct: 400 ALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 458
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ VYNA++H K ++ A++L + M +KG A +++N+LI CK+ K+ E
Sbjct: 459 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQE 517
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-----------------------IIRTGEEVFGLL 333
A Q F EM+ + I P TY +D I+ T VF L
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT---VFALF 574
Query: 334 ESMRKMGCQPTNDTY-----------------------------------IMLIKKFSRW 358
E M G +P TY +LI +
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+ +E+ E G P ++ + L+ + GK++EA + + +K L+P+ T
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 693
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K + P NT ++ II G C EA+ + EM + G+ D + S +I + + ++
Sbjct: 4 KGLVP-NTYTYTIITAGLCRA-KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 61
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+VLR+ D M GI + YN +IH L K ++ A ++K M G PN T+ L
Sbjct: 62 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 121
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGC 341
I+ C+ + A + DEM +R + P+ +Y A ++ + +++ LLE M G
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P Y LI ++ + ++ + +S +G PD Y A+I L GK+EEA
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241
Query: 402 YYMEMKEKQLLPEPKT 417
Y +E++ + L P+ T
Sbjct: 242 YLLEIQGRGLKPDAVT 257
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N++++G C G +A + M G + +F +I Y + N+ +
Sbjct: 76 IPINLITYNVLIHGLCKF-GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 134
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L D+M++ + Y A+I+ L + + A L++ M G+ PNVV Y++LI
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
+++EAR+ D M G++P I Y+A + + EE L ++ G +P
Sbjct: 195 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 254
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T+ I +S+ + K ++E+ ++G P+ YT LI+ F G L EA +
Sbjct: 255 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 314
Query: 405 EMKEKQLLPEPKT 417
+ +LP+ +T
Sbjct: 315 HLHALGVLPDVQT 327
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 151/359 (42%), Gaps = 36/359 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G Y ++I+ K + + A+ L DEM P++ L + C
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL---VDGLCKS 408
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ RA F + ++ C+ +NV +A L +K V P ++
Sbjct: 409 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP-HSFV 467
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +++G C G +A ++ EM Q+G +SF+ +I Y K+ + + +LF +M
Sbjct: 468 YNALVHGCCKE-GDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE-----------------KGVAPN 277
I D Y VI K +++A L K M+E KGV P+
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPD 585
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVF 330
VTY +I CK L EA + DE++ +G+ T T H D++ T E
Sbjct: 586 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML-TKGTIH---DLLITALCKREDLTEAS 641
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
LL+ M ++G +P+ L++ F + +V+ + G PD ++ L++
Sbjct: 642 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 178/402 (44%), Gaps = 58/402 (14%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R+ + ++A L + K D A A+ RG + PS++T L ILI +C + + +A+
Sbjct: 39 RDINLLLASLCQAGKMDQAMAI---FRGIQCSPSVIT---LNILINGFCELQLLDKALEL 92
Query: 126 FYAY-KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM----FCNKDVFPFNTKSFNIILN 180
F+ K F + ++ C+ + A L+ C+ DV + +
Sbjct: 93 FHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS-----VAR 147
Query: 181 GWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+C EA ++ ++M ++ D+V+++ II + KA + + + + + MG
Sbjct: 148 GFCKA-QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKARKLDEA 297
+ Y +I K + +A+ L K + + PNVVT+N+LI LCKA +L+ A
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M R + TY +D + + G EV + E M + GC P+ TY L+
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK------------------- 395
+ + +V + G PD ++YT L+ LF NGK
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 396 ----------------LEEAHQYYMEMKEKQLLPEPKTDELL 421
++EA +YY+EM +++L P+P T +LL
Sbjct: 387 AVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 149/360 (41%), Gaps = 49/360 (13%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---M 161
T +LI C +G A+ + + D LL++LC+ + A + +
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSK 220
C+ V + NI++NG+C + + E ++ EM + + + +++ II CY K
Sbjct: 65 QCSPSVI-----TLNILINGFCELQLLDKALE-LFHEMEKNFALVPEATTYTAIIKCYCK 118
Query: 221 ---------------------------ARNLHKVLR-------LFDQMKRMGIECDRKVY 246
AR K R L D +++ + D +
Sbjct: 119 MDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +IH K V++A +++++ G PN VTY +LI CK+ L EA Q F +
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 307 RG--ISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
R P + T++A + + E F L++ M+ + TY L+ + +
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V +V+ E+ G P +YT L+HA G L++A Q M K + P+ T +L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 30/335 (8%)
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGS 188
RF F+V L++ LC+ + +A + P N + N++L C G
Sbjct: 3 RFTFSV-------LIAGLCKAGRLGEAVECYNQMLERHCVP-NLRDINLLLASLCQA-GK 53
Query: 189 SREAERVWMEMSQRGI-CY-DVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDRKV 245
+A ++ RGI C V++ + +I+ + + + L K L LF +M K + +
Sbjct: 54 MDQAMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATT 108
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y A+I K + A L++ E + +V+ S+ + CKA+++DEA Q +M+
Sbjct: 109 YTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMV 166
Query: 306 QR-GISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++ P I + H F R E + +LE++ MGC P TY LI F +
Sbjct: 167 EKKSAKPDIVAWNVIIHGFCKAGRV-REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225
Query: 361 FGNVFKVWNEIS--ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+++ +S ++ P+ ++ ALI L +LE A + +MK + L + T
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
L D KQ +++ + + G N V++
Sbjct: 286 TTLMD-GLCKQGRTSEVSRVFEEMLREGCNPSVVT 319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES 335
PN T++ LI LCKA +L EA + +++ML+R P +R + L + ++ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLNG 394
R + C P+ T +LI F + ++++E+ +N P+ ++YTA+I
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 395 KLEEAHQYYME 405
+L++A Q E
Sbjct: 121 RLDQARQLLEE 131
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+R ++ +I L K + +A+ M E+ PN+ N L+ LC+A K+D+A F
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF 61
Query: 302 DEMLQRGI--SPTIRTYHAF------LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
RGI SP++ T + L ++ E+F +E + P TY +IK
Sbjct: 62 -----RGIQCSPSVITLNILINGFCELQLLDKALELFHEME--KNFALVPEATTYTAIIK 114
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ + + ++ E S + D + T++ +++EA+Q ++M EK+
Sbjct: 115 CYCKMDRLDQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 131/247 (53%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ +S++I+++G G S++ +++ EM ++G+ D +++ +I + K+ ++K +L
Sbjct: 585 DVRSYSILIHGLVKG-GFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQL 643
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++MK G++ Y +VI LAK + +A L + + K V NVV Y+SLI K
Sbjct: 644 LEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGK 703
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDT 347
++DEA +E++Q+G++P T++ LD + EE+ ++M+ + C P T
Sbjct: 704 VGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVT 763
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +++ + R+F F W E+ + G P+ +YT +I L G + EA + K
Sbjct: 764 YSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFK 823
Query: 408 EKQLLPE 414
+P+
Sbjct: 824 SSGGIPD 830
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 177/403 (43%), Gaps = 17/403 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A + Y+ +I +L K + + A + D M+ P+++T I+I R C +
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVN---IMIDRLCKAQRLDE 464
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
A + F F L+ L R+ V DA L + P ++I
Sbjct: 465 ACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524
Query: 180 NGW-CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
N + C G + +++ EM RG D++ + + C KA + K LF+++K G
Sbjct: 525 NFFKC---GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ D + Y+ +IH L KG KD L M+E+G+ + YN +I CK+ K+++A
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
Q +EM +G+ PT+ TY + +D I +E + L E + Y LI F
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGF 701
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + + + E+ + G P+ ++ L+ AL +++EA + MK + P
Sbjct: 702 GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNE 761
Query: 416 KT-----DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T + L + +NK FV Q + +P + T +IS
Sbjct: 762 VTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 183/457 (40%), Gaps = 80/457 (17%)
Query: 32 ELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM 91
ELV V+ ++ D A +F W +++ HS Y+ ++ ++ + R + +++EM
Sbjct: 100 ELVVGVIRRLK-DVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEM 158
Query: 92 RGGETGP----------SLVTKQTL----------------------LILIRRYCAVHDV 119
GP S V + L LI A H+
Sbjct: 159 SMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEA 218
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+ + + V + F L+ R V A L+ D N+ + +++L
Sbjct: 219 DPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLL----DEMKSNSFNADLVL 274
Query: 180 NGWC-NIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM- 234
C + G + + W E+ +G+ D V+F+ +I KA + + + LF+++
Sbjct: 275 YNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELD 334
Query: 235 ----------------------------------KRMGIECDRKVYNAVIHALAKGRLVK 260
KR G YN ++ L + V+
Sbjct: 335 SNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 394
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A+ ++++M+ APN+ +YN LI LCKA +L+ A + D M + G+ P I T + +
Sbjct: 395 EALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMI 453
Query: 321 DIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + +E + + C P + T+ LI R + + + ++ ++ ++G
Sbjct: 454 DRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT 513
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P+ YT+LI F G+ E+ H+ Y EM + P+
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 131/306 (42%), Gaps = 10/306 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G R Y +I L K + L EM+ E G L T+ I+I +C
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK--EQGLHLDTR-AYNIVIDGFCKS 634
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKS 174
V +A K + + ++ L + + +A +++F N
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEA-YMLFEEAKSKAVDLNVVV 693
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G+ +G EA + E+ Q+G+ + +++C++ KA + + L F M
Sbjct: 694 YSSLIDGF-GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K + + Y+ +++ L K R A + M+++G+ PN +TY ++I L + +
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
EA+ F+ G P Y+A ++ + + + L E R GC+ + T ++L
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVL 872
Query: 352 IKKFSR 357
+ +
Sbjct: 873 LDALHK 878
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 11/280 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+ K+ G TR Y+ +I K K + A+ L++EM+ P++VT ++ I
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV---ID 664
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDV 167
+ + A F K + + + L+ + + +A E LM K +
Sbjct: 665 GLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM--QKGL 722
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P NT ++N +L+ EA + M + V++S +++ K R +K
Sbjct: 723 TP-NTYTWNCLLDALVKA-EEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA 780
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M++ G++ + Y +I LA+ V +A L + + G P+ YN++I+
Sbjct: 781 FVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEG 840
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
L A K +A F+E +G +T LD + +
Sbjct: 841 LSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKAD 880
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y ++I L K+ + D A+ L +E + ++V +L+
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLID------GF 701
Query: 117 HDVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FP 169
VGR A+ + + LL AL + + + +A + C +++ P
Sbjct: 702 GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA---LVCFQNMKNLKCP 758
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N +++I++NG C + ++ A W EM ++G+ + ++++ +IS ++ N+ +
Sbjct: 759 PNEVTYSIMVNGLCKVRKFNK-AFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKD 817
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF++ K G D YNA+I L+ DA L + KG T L+ L
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALH 877
Query: 290 KARKLDEA 297
KA L++A
Sbjct: 878 KADCLEQA 885
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 106/261 (40%), Gaps = 7/261 (2%)
Query: 193 ERVWMEMSQRGICYDVVSFSCI--ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E++ EMS G + + +CI ++ + K+R L + + + M++ Y +I
Sbjct: 152 EQILEEMSMAG--FGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLI 209
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL+ ++L++ M+E G V + +LI + ++D A DEM +
Sbjct: 210 GALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFN 269
Query: 311 PTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+ Y+ +D + G + + ++ G P + T+ +I + + ++
Sbjct: 270 ADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVEL 329
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ E+ N + P +Y +I GK EA+ K K +P +
Sbjct: 330 FEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGR 389
Query: 428 KQFVERQIASLKAHQPQSGQN 448
K VE + L+A + + N
Sbjct: 390 KGKVEEALRILEAMKMDAAPN 410
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 20/384 (5%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL R D A F +AG+ + + + ++ M+ + + +FD A L+D M
Sbjct: 193 VVLGVLGRARQDSIAEEVFLRFAGEGA----TVQVFNAMMGVYARSGRFDDARQLLDTMH 248
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P LV+ TL I R G A++ + ++ + + L+SA +
Sbjct: 249 DRGIDPDLVSFNTL-INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 153 NVQDA----EHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
N++DA E ++ C D++ +N + ++G C G + EAER++ E+ ++G
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAM---VSVHGRC---GKAEEAERLFRELVEKGFMP 361
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D ++++ ++ ++K N+ KV +Q+ + G + + YN +IH K + A+ L
Sbjct: 362 DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLY 421
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M G P+ VTY +I L K ++ EA + ++M G+ PT+ + A + G
Sbjct: 422 DEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKG 481
Query: 327 ---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ + M G +P Y++++ F+R + ++ ++ + PD Y
Sbjct: 482 GRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMY 541
Query: 384 TALIHALFLNGKLEEAHQYYMEMK 407
L+ AL K EE + +M+
Sbjct: 542 QVLLVALAKEDKCEEIEEVIQDME 565
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK--VLRLFDQMKRMGIECDRK 244
G +A ++ M RGI D+VSF+ +I+ SK+ L L L ++++ G+ D
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I A ++ ++DA+++ + M P++ TYN+++ + K +EA + F E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFREL 354
Query: 305 LQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+++G P TY++ L + G ++V E + K G + TY +I + + +
Sbjct: 355 VEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++E+ G PD +YT +I +L ++ EA + +M + L P
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKP 466
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 48/321 (14%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG----WCNIIGSSRE 191
++ F ++ R DA L+ ++ + P + SFN ++N C G + +
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDP-DLVSFNTLINARSKSGCLAAGVALD 279
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+ E+ Q G+ DV++++ +IS S++ NL + +F+ M D YNA++
Sbjct: 280 ---LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ ++A L + + EKG P+ +TYNSL+ K +D+ +++++ G
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKK 396
Query: 312 TIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY+ + + + G + GL + MR MGC P TY ++I + + KV
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVL 456
Query: 369 NEISE-----------------------------------NGNGPDRSSYTALIHALFLN 393
++++ +G PDR +Y ++ +
Sbjct: 457 EDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARS 516
Query: 394 GKLEEAHQYYMEMKEKQLLPE 414
G E+ Y +M P+
Sbjct: 517 GDTEKMLCLYRKMMNDNYRPD 537
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 184 NIIGSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
++G +R+ AE V++ + G V F+ ++ Y+++ +L D M GI+
Sbjct: 196 GVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDTMHDRGID 253
Query: 241 CDRKVYNAVIHALAKGRLVKD--AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D +N +I+A +K + A+ L+ + + G+ P+V+TYN+LI ++ L++A
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAV 313
Query: 299 QAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F++M+ P + TY+A + + R G EE L + + G P TY L+ F
Sbjct: 314 TVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAF 373
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
++ V ++ + G + +Y +IH G+L+ A Y EM+ P+
Sbjct: 374 AKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDA 433
Query: 416 KTDELLQD 423
T ++ D
Sbjct: 434 VTYTVMID 441
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 38/317 (11%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K T+L+L+ + DV + + K + + ++ ++S LC + +D E +
Sbjct: 848 ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELM 907
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ EM G D+ + +++ Y+
Sbjct: 908 I-----------------------------------AEMEGAGFKPDLAILNALLNMYTA 932
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A N + +++ + G+E D YN +I + ++ +L+ M ++G+ P + +
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
Y SL+ KA ++A Q F+EM + YH + I R + LL M+
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G +PT T +L+ + Q V N + + Y+ + A NG
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Query: 398 EAHQYYMEMKEKQLLPE 414
+EMK + P+
Sbjct: 1113 HGTTKLLEMKRDGVEPD 1129
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQ 233
+ I++ +C + G A R+ + Q GI +++S II Y K + L + + +
Sbjct: 713 YESIISTYCKL-GFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIK-LWQQAEILVK 770
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
R DR+++NA+IHA A+ L + A ++ +M + G P V + N +++ L +
Sbjct: 771 GLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGR 830
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIM 350
LDE +E+ + T LD +VF +++ M+ G P Y
Sbjct: 831 LDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRS 890
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I +F +V + E+ G PD + AL++ G + Q Y + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 411 LLPEPKT 417
L P+ T
Sbjct: 951 LEPDEDT 957
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L F+ + R R V AV+ + GR +D+I+ + G V +N+++
Sbjct: 172 RALDAFEWLARSSAPASRAV--AVVLGVL-GRARQDSIAEEVFLRFAGEGATVQVFNAMM 228
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG----LLESMRKMG 340
++ + D+ARQ D M RGI P + +++ ++ ++G G LL +R+ G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY LI S+ + V+ ++ + PD +Y A++ GK EEA
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348
Query: 401 QYYMEMKEKQLLPEPKT 417
+ + E+ EK +P+ T
Sbjct: 349 RLFRELVEKGFMPDAIT 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 15/239 (6%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ ++KA ++ +V+++++ MK G + +Y ++I L +D ++ ME G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRT--GEEVF 330
P++ N+L+ A D Q + +L+ G+ P TY+ + + R+ EE F
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL M K G P +Y L+ ++ +++ E+ +RS Y ++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNT 449
G +A MKE + P T +L SY A QP+ +N
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMT-SYG-----------TAGQPREAENV 1082
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 15/271 (5%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + ++L+ + G E +++ M G ++ + +IS V
Sbjct: 846 FKISKSTVLLLLDAFAKA-GDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDV 904
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M+ G + D + NA+++ + +S+ E G+ P+ TYN+LI
Sbjct: 905 ELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVM 964
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
C++ + +E +EM +RG++P +++Y + L E+ + E MR Q
Sbjct: 965 YCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLN 1024
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEIS---ENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
Y M++K + R GN K N ++ E+G P ++ L+ + G+ EA
Sbjct: 1025 RSIYHMMMKIY---RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAEN 1081
Query: 402 YYMEMKEKQL----LPEPKT-DELLQDWSYN 427
+K L LP D L++ YN
Sbjct: 1082 VLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I+C +A + ++F M+ +GIE + +Y ++I K + A LM + G
Sbjct: 681 LITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSG 740
Query: 274 VAPNVVT-----------------------------------YNSLIKPLCKARKLDEAR 298
+ N+++ +N+LI ++ ++AR
Sbjct: 741 IPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKAR 800
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
FD M++ G PT+ + + + +I G +E++ ++E ++ M + + T ++L+ F
Sbjct: 801 AVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAF 860
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ V K++N + G P+ Y ++I L + + + EM+ P+
Sbjct: 861 AKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPD 919
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 43/323 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +GY + Y +MI++L +F +I EM G P L LL + Y A
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNM---YTAA 933
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ R + R G+E + + L +M+C F +
Sbjct: 934 GNFDRTTQVY----RSILEAGLEPDEDTYNTLI----------VMYCRS----FRPEEGF 975
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+LN EM +RG+ + S+ +++ +KA + ++F++M+
Sbjct: 976 TLLN-----------------EMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ +R +Y+ ++ A +L+ M+E G+ P + T + L+ A + E
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPRE 1078
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG---LLESMRKMGCQPTNDTYIMLI 352
A + + + + Y D ++ G+ G LLE M++ G +P + + I
Sbjct: 1079 AENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLE-MKRDGVEPDHQVWTCFI 1137
Query: 353 KKFSRWRQFGNVFKVWNEISENG 375
+ S Q + + + + G
Sbjct: 1138 RAASLCEQTADAILLLKSLQDCG 1160
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K G C+ +Y +I L + +A + M+ G+ + Y S+I CK
Sbjct: 668 LKYPGQNCN--LYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGF 725
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ A + D+ LQ GI I + + I+ ++ L++ +R+ +
Sbjct: 726 PETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQ-ASGIDRRIWN 784
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI ++ + V++ + + G P S ++ AL ++G+L+E + E+++
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844
Query: 410 QLLPEPKTDELLQD 423
T LL D
Sbjct: 845 NFKISKSTVLLLLD 858
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I + K+ A L+ ++ G T P++V T+ I C V
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI---IDALCKYQLV 215
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + + + L+ C +++A L+ K + P N ++NI
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP-NVYTYNI 274
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EA+ V M + + DV+++S ++ Y + K +F+ M M
Sbjct: 275 LVDALCKE-GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y +I+ K ++V +A++L K M +K + P +VTY+SLI LCK+ ++
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
DEM RG + TY + +D + + G + L M+ G +P T+ +L+
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + +V+ ++ G + +Y +I G LEEA +M++ +P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513
Query: 415 PKTDELL 421
T E++
Sbjct: 514 AVTFEII 520
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 53/401 (13%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+++ ++ K++ + TA +L + P L+T L ILI +C + + +
Sbjct: 61 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT---LNILINCFCHMGQITFGFSVL 117
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ A H F +K + F N S+ ++NG C
Sbjct: 118 AKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH--FHDKLLAQGFQLNQVSYGTLINGVC 175
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G +R A ++ ++ R +VV +S II K + + + LF +M GI D
Sbjct: 176 KI-GDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ +I+ +K+AI L+ M K + PNV TYN L+ LCK K+ EA+
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 304 MLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
ML+ + P + TY +D ++ + VF +M MG P TY +LI F +
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF---NAMSLMGVTPDVHTYTILINGFCK 351
Query: 358 WRQFG---NVFK-----------------------------VWN---EISENGNGPDRSS 382
+ N+FK VW+ E+ + G + +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVIT 411
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y++LI L NG L+ A + +MK++ + P T +L D
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T +F ++NG C + G +A ++ +G + VS+ +I+ K + ++L
Sbjct: 995 DTITFTTLINGLC-LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 1053
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ + D +YN +I AL K +LV A L M KG++ +VVTYN+LI C
Sbjct: 1054 LRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG----EEVFGLLESMRKMGCQPTN 345
KL EA ++M+ + I+P +RTY+ +D + + G +E +L M GC+
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
T+ ++I + V K+ +E+ G
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K K A +++ M P ++T TL+ Y V++V +A + F
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM---DGYFLVYEVKKAQHVFN 328
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A + + L++ C+ K V +A +L K++ P +++ +++G C
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLC-- 385
Query: 186 IGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
S VW EM RG +V+++S +I K +L + + LF++MK GI +
Sbjct: 386 --KSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ ++ L KG +KDA + + + KG NV TYN +I CK L+EA
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLS 503
Query: 303 EMLQRGISPTIRTYHAFL 320
+M G P T+ +
Sbjct: 504 KMEDNGCIPDAVTFEIII 521
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ NI++N +C++ G + ++ +RG D ++F+ +I+ ++K L D+
Sbjct: 963 TLNILINCFCHM-GQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDK 1021
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G + ++ Y +I+ + K + AI L++ ++ + P+VV YN++I LCK +
Sbjct: 1022 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQL 1081
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+ +A F EM +GIS + TY+ + I+ +E GLL M P TY +
Sbjct: 1082 VSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNI 1141
Query: 351 LIKKFSRWRQ--FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L+ + + + +++ +NG + ++ +I ALF + ++ + EM
Sbjct: 1142 LVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201
Query: 409 KQLL 412
+ LL
Sbjct: 1202 RGLL 1205
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISC-YSKARNLHKVLRLFDQMKRMGIECDRK 244
+G R + M++RG V S I ++ ++ + L +++ GI+ D
Sbjct: 907 VGFEHGVVRGGLAMAERG----VTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLF 962
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
N +I+ + S++ + ++G P+ +T+ +LI LC ++++A D++
Sbjct: 963 TLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKL 1022
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIM---LIKKFSRWRQF 361
L +G +Y ++ + + ++ +RK+ + T +M +I + +
Sbjct: 1023 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLV 1082
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++ E++ G D +Y LI+ + GKL+EA +M K + P +T +L
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNIL 1142
Query: 422 QD 423
D
Sbjct: 1143 VD 1144
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 20/384 (5%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+V VL R D A F +AG+ + + + ++ M+ + + +FD A L+D M
Sbjct: 193 VVLGVLGRARQDSIAEEVFLRFAGEGA----TVQVFNAMMGVYARSGRFDDARQLLDTMH 248
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P LV+ TL I R G A++ + ++ + + L+SA +
Sbjct: 249 DRGIDPDLVSFNTL-INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSS 307
Query: 153 NVQDA----EHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
N++DA E ++ C D++ +N + ++G C G + EAER++ E+ ++G
Sbjct: 308 NLEDAVTVFEDMIASECRPDLWTYNAM---VSVHGRC---GKAEEAERLFRELVEKGFMP 361
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D ++++ ++ ++K N+ KV +Q+ + G + + YN +IH K + A+ L
Sbjct: 362 DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLY 421
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M G P+ VTY +I L K ++ EA + ++M G+ PT+ + A + G
Sbjct: 422 DEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKG 481
Query: 327 ---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ + M G +P Y++++ F+R + ++ ++ + PD Y
Sbjct: 482 GRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMY 541
Query: 384 TALIHALFLNGKLEEAHQYYMEMK 407
L+ AL K EE + +M+
Sbjct: 542 QVLLVALAKEDKCEEIEEVIQDME 565
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK--VLRLFDQMKRMGIECDRK 244
G +A ++ M RGI D+VSF+ +I+ SK+ L L L ++++ G+ D
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I A ++ ++DA+++ + M P++ TYN+++ + K +EA + F E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFREL 354
Query: 305 LQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+++G P TY++ L + G ++V E + K G + TY +I + + +
Sbjct: 355 VEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++E+ G PD +YT +I +L ++ EA + +M + L P
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKP 466
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 48/328 (14%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG----WCNIIGSSRE 191
++ F ++ R DA L+ ++ + P + SFN ++N C G + +
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDP-DLVSFNTLINARSKSGCLAAGVALD 279
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+ E+ Q G+ DV++++ +IS S++ NL + +F+ M D YNA++
Sbjct: 280 ---LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ ++A L + + EKG P+ +TYNSL+ K +D+ +++++ G
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKK 396
Query: 312 TIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY+ + + + G + GL + MR MGC P TY ++I + + KV
Sbjct: 397 NEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVL 456
Query: 369 NEISE-----------------------------------NGNGPDRSSYTALIHALFLN 393
++++ +G PDR +Y ++ +
Sbjct: 457 EDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARS 516
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G E+ Y +M P+ ++L
Sbjct: 517 GDTEKMLCLYRKMMNDNYRPDDDMYQVL 544
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 184 NIIGSSRE---AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
++G +R+ AE V++ + G V F+ ++ Y+++ +L D M GI+
Sbjct: 196 GVLGRARQDSIAEEVFLRFAGEGATVQV--FNAMMGVYARSGRFDDARQLLDTMHDRGID 253
Query: 241 CDRKVYNAVIHALAKGRLVKD--AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D +N +I+A +K + A+ L+ + + G+ P+V+TYN+LI ++ L++A
Sbjct: 254 PDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAV 313
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F++M+ P + TY+A + + R G EE L + + G P TY L+ F
Sbjct: 314 TVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAF 373
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
++ V ++ + G + +Y +IH G+L+ A Y EM+ P+
Sbjct: 374 AKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDA 433
Query: 416 KTDELLQD 423
T ++ D
Sbjct: 434 VTYTVMID 441
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 38/317 (11%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K T+L+L+ + DV + + K + + ++ ++S LC + +D E +
Sbjct: 848 ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELM 907
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ EM G D+ + +++ Y+
Sbjct: 908 I-----------------------------------AEMEGAGFKPDLAILNALLNMYTA 932
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A N + +++ + G+E D YN +I + ++ +L+ M ++G+ P + +
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMR 337
Y SL+ KA ++A Q F+EM + YH + I R + LL M+
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G +PT T +L+ + Q V N + + Y+ + A NG
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Query: 398 EAHQYYMEMKEKQLLPE 414
+EMK + P+
Sbjct: 1113 HGTTKLLEMKRDGVEPD 1129
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQ 233
+ I++ +C + G A R+ + Q GI +++S II Y K + L + + +
Sbjct: 713 YESIISTYCKL-GFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIK-LWQQAEILVK 770
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
R DR+++NA+IHA A+ L + A ++ +M + G P V + N +++ L +
Sbjct: 771 GLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGR 830
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIM 350
LDE +E+ + T LD +VF +++ M+ G P Y
Sbjct: 831 LDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRS 890
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I +F +V + E+ G PD + AL++ G + Q Y + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 411 LLPEPKT 417
L P+ T
Sbjct: 951 LEPDEDT 957
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ L F+ + R R V AV+ + GR +D+I+ + G V +N+++
Sbjct: 172 RALDAFEWLARSSAPASRAV--AVVLGVL-GRARQDSIAEEVFLRFAGEGATVQVFNAMM 228
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG----LLESMRKMG 340
++ + D+ARQ D M RGI P + +++ ++ ++G G LL +R+ G
Sbjct: 229 GVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG 288
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY LI S+ + V+ ++ + PD +Y A++ GK EEA
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348
Query: 401 QYYMEMKEKQLLPEPKT 417
+ + E+ EK +P+ T
Sbjct: 349 RLFRELVEKGFMPDAIT 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 15/239 (6%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ ++KA ++ +V+++++ MK G + +Y ++I L +D ++ ME G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRT--GEEVF 330
P++ N+L+ A D Q + +L+ G+ P TY+ + + R+ EE F
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL M K G P +Y L+ ++ +++ E+ +RS Y ++
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNT 449
G +A MKE + P T +L SY A QP+ +N
Sbjct: 1036 RNAGNHSKAENLLAVMKEDGIEPTIATMHILMT-SYG-----------TAGQPREAENV 1082
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 15/271 (5%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + + ++L+ + G E +++ M G ++ + +IS V
Sbjct: 846 FKISKSTVLLLLDAFAKA-GDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDV 904
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M+ G + D + NA+++ + +S+ E G+ P+ TYN+LI
Sbjct: 905 ELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVM 964
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
C++ + +E +EM +RG++P +++Y + L E+ + E MR Q
Sbjct: 965 YCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLN 1024
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEIS---ENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
Y M++K + R GN K N ++ E+G P ++ L+ + G+ EA
Sbjct: 1025 RSIYHMMMKIY---RNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAEN 1081
Query: 402 YYMEMKEKQL----LPEPKT-DELLQDWSYN 427
+K L LP D L++ YN
Sbjct: 1082 VLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I+C +A + ++F M+ +GIE + +Y ++I K + A LM + G
Sbjct: 681 LITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSG 740
Query: 274 VAPNVVT-----------------------------------YNSLIKPLCKARKLDEAR 298
+ N+++ +N+LI ++ ++AR
Sbjct: 741 IPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWNALIHAYAESGLYEKAR 800
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
FD M++ G PT+ + + + +I G +E++ ++E ++ M + + T ++L+ F
Sbjct: 801 AVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAF 860
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ V K++N + G P+ Y ++I L + + + EM+ P+
Sbjct: 861 AKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPD 919
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 43/323 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +GY + Y +MI++L +F +I EM G P L LL + Y A
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNM---YTAA 933
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ R + R G+E + + L +M+C F +
Sbjct: 934 GNFDRTTQVY----RSILEAGLEPDEDTYNTLI----------VMYCRS----FRPEEGF 975
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+LN EM +RG+ + S+ +++ +KA + ++F++M+
Sbjct: 976 TLLN-----------------EMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ +R +Y+ ++ A +L+ M+E G+ P + T + L+ A + E
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPRE 1078
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG---LLESMRKMGCQPTNDTYIMLI 352
A + + + + Y D ++ G+ G LLE M++ G +P + + I
Sbjct: 1079 AENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLE-MKRDGVEPDHQVWTCFI 1137
Query: 353 KKFSRWRQFGNVFKVWNEISENG 375
+ S Q + + + + G
Sbjct: 1138 RAASLCEQTADAILLLKSLQDCG 1160
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 174/382 (45%), Gaps = 12/382 (3%)
Query: 80 KFDTAWALIDEM-RGGETGPSLVTKQTLL-ILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+ D A AL+D + GG +G L ILI+R C+ GR +A + +
Sbjct: 73 EIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSG---GRVADAERVFATLGASAT 129
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ + +++ CR ++DA L+ + FP +T +FN ++ C + G +A V+
Sbjct: 130 VVTYNTMVNGYCRAGRIEDARRLI--SGMPFPPDTFTFNPLIRALC-VRGRVPDALAVFD 186
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M RG VV++S ++ KA + + L D+M+ G E D YN +I+A+
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEG 246
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A++++ + G P+ VTY ++K LC + + E + F EM +P T++
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFN 306
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + G + +++ M + GC P TY ++ + + ++ + +
Sbjct: 307 TIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
G PD +YT ++ L + E A + EM P+ T + K V+R
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 435 IASLKAHQPQSGQNTRVISKKS 456
I ++ ++G N +++ S
Sbjct: 427 IKVVE-QMSENGCNPDIVTYNS 447
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 12/370 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + S Y ++ K + A L+DEMR P +VT +LI C DV
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN---VLINAMCNEGDV 248
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFN 176
A+N + +L +LC R+K V++ M NK P + +FN
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK-CAP-DEVTFN 306
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ C G A +V MS+ G D+V++S I+ + + L ++K
Sbjct: 307 TIVTSLCQ-QGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D Y V+ L + A LM M P+ VT+N++I LC+ +D
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + ++M + G +P I TY++ +D + R ++ LL +++ GC+P T+ L+K
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + ++ + + PD +++ +I +L G L +A + M E +P
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545
Query: 414 EPKTDELLQD 423
T ++ D
Sbjct: 546 NQSTYNIVVD 555
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L EM + P VT T+ + C V RAI I + +L
Sbjct: 289 LFAEMASNKCAPDEVTFNTI---VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD 345
Query: 147 ALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LC V DA L+ C D + T +L G C+I AE + EM
Sbjct: 346 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT-----VLKGLCSI-EQWEHAEELMAEMV 399
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
D V+F+ +I+ + + + +++ +QM G D YN++I L R +
Sbjct: 400 CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID 459
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
DA+ L+ +++ G P++VT+N+L+K LC + ++A Q M+ P T++ +
Sbjct: 460 DAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519
Query: 321 DIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + +E+++ M GC P TY +++ + + K+ + ++ NG
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT-NGT- 577
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y +I + GK+EEA M L P+ T
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTIT 617
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 153/360 (42%), Gaps = 22/360 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G T Y T++ L + +++ A L+ EM + P VT T+ I C
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV---IASLCQK 420
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPF 170
V RAI I + ++ LC + + DA L+ C D+ F
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT +L G C++ +AE++ + M D +F+ +I+ + L + +
Sbjct: 481 NT-----LLKGLCSV-DRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M G ++ YN V+ AL K ++A+ L+ M P+++TYN++I + K
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITK 592
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDT 347
A K++EA M+ G+SP TY + I R + +L ++ MG P
Sbjct: 593 AGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATF 652
Query: 348 YIMLIKKFSR-WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y ++ F + WR + + +G PD S+Y L+ AL L+EA Q + +
Sbjct: 653 YNDILLGFCQNWRT-DIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 152/394 (38%), Gaps = 55/394 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ L + D A ++D M P +VT ++L + DVGR +A
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD------GLCDVGRVDDAVE 358
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNIILNG 181
R K D + +L LC + + AE LM C+ P + +FN ++
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD--CPPDEVTFNTVIAS 416
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI-- 239
C G A +V +MS+ G D+V+++ II R + + L ++ G
Sbjct: 417 LCQK-GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475
Query: 240 -------------------------------EC--DRKVYNAVIHALAKGRLVKDAISLM 266
+C D +N VI +L + L+ AI +
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRT 325
K M E G PN TYN ++ L KA K EA + M +P + TY+ + +I +
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKA 593
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G EE LL M G P TY L R ++ + + G PD + Y
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ N + + A + M +P+ T
Sbjct: 654 NDILLGFCQNWRTDIAIDCFAHMVSSGCMPDEST 687
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 112/312 (35%), Gaps = 75/312 (24%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T+IA L + D A ++++M P +VT ++ I C + A+
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI---IDGLCNERCIDDAMELLS 466
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNT--------- 172
+ + I F LL LC +DAE LM C D FNT
Sbjct: 467 NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526
Query: 173 ------KSFNIILNGWC-------NII-------GSSREAERVWMEMSQRGICYDVVSFS 212
++ I+ C NI+ G ++EA ++ M+ D+++++
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDLITYN 584
Query: 213 CIISCYSKARNLHKVL-----------------------------------RLFDQMKRM 237
+IS +KA + + L R+ +++ M
Sbjct: 585 TVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDM 644
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D YN ++ + AI M G P+ TY L++ L LDEA
Sbjct: 645 GLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEA 704
Query: 298 RQAFDEMLQRGI 309
+Q + G+
Sbjct: 705 KQLLVNLCSLGV 716
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 11/365 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY Y ++I L K + A L+ +M P+L+T T+ I C +
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTV---IDGLCKDRLI 211
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A+ F V + + L+ C ++A L M ++ P + +FNI
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINP-DDYTFNI 270
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G EA+ V+ M +RG D+V+++ ++ + + N+ + LF++M +
Sbjct: 271 LVDALCKE-GRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E D YN +I+ K +V +A+ L K + K + PN+ TYNSLI LCK ++
Sbjct: 330 GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCV 389
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ DEM RG SP I TY+ FLD + E+ L + + G P Y ++++
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVEN 448
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + + + + +G P+ +YT +I+AL + +EA +M + P+
Sbjct: 449 FCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508
Query: 415 PKTDE 419
T E
Sbjct: 509 AVTFE 513
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 14/376 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ ++ + ++ + TA +L ++ PS+ T L ILI YC + A +
Sbjct: 58 FDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIAT---LTILINCYCHQAHLSFAFSLLG 114
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWC 183
+ F + F L++ C V A M D+ +P + S+ ++NG C
Sbjct: 115 TILKMGFQPNMVTFNTLINGFCINGMVSKA---MAFRLDLMAKGYPLDEFSYGSLINGLC 171
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G +R+A ++ +M + + +++++S +I K R + LRLF + GI D
Sbjct: 172 K-NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++IH ++A L+ M + P+ T+N L+ LCK ++ EA+ F
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290
Query: 304 MLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M++RG P I TY+A ++ + E L M K G +P Y +LI + +
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++ EI P+ ++Y +LI L G++ + EM ++ P+ T +
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410
Query: 421 LQDWSYNKQFVERQIA 436
D + E+ I+
Sbjct: 411 FLDAFCKSKPYEKAIS 426
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G++ + +A++ M+ GE P +VT L+ +C ++V A F +
Sbjct: 279 GRIVEAQGVFAVM--MKRGEK-PDIVTYNALM---EGFCLSNNVSEARELFNRMVKRGLE 332
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ ++ L++ C+ V +A L + C K++ P N ++N +++G C + G
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRC-KNLVP-NLATYNSLIDGLCKL-GRMSCV 389
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + EM RG D+V+++ + + K++ K + LF Q+ + GI D +Y+ ++
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVEN 448
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
KG +K A ++ + G PNV TY +I LCK DEA +M P
Sbjct: 449 FCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508
Query: 313 IRTYHAFLDIIRTGEE 328
T+ + ++ E
Sbjct: 509 AVTFETIIGALQERNE 524
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V D + M K P + ++ L+ + + A F ++ +GI+P+I T
Sbjct: 36 VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + F LL ++ KMG QP T+ LI F ++ G
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
D SY +LI+ L NG+ +A Q +M+E + P
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRP 193
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 189/406 (46%), Gaps = 24/406 (5%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WEA L + K G Y T++ L KV +F+ +++EM PS
Sbjct: 267 WEAVEIKNLLSYK--GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
L+ +R+ ++G A + K+F A + + L++++C+ + +AE L
Sbjct: 325 NLVDGLRKK---GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+K +FP N +++I+++ +C G A +M++ GI V +S +IS + K
Sbjct: 382 GHKGLFP-NDVTYSILIDSFCKR-GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLG 439
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L LFD+M G++ + +Y ++I K + +A L M KG++PN T+
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEV--FGLLESMRKM 339
+LI LC A ++ EA + F EM++ + P TY+ ++ + G V F LL+ M +
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559
Query: 340 GCQPTNDTYIMLIK------KFSRWRQFGNVFK----VWNEISENGNGPDRSSYTALIHA 389
G P TY LI + S R+F N + NEI G P+ +YTALI+
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE--GCLPNVVTYTALING 617
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
L G +++A EM LP T D+ ++ +E+ I
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 663
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 173/394 (43%), Gaps = 22/394 (5%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
++V+N E + G R ++ L ++R+F A L DE+ P
Sbjct: 154 TYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRP 213
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
+ + +R C + D RA + + + + + LC+ + V +A
Sbjct: 214 DVYVYTAV---VRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270
Query: 159 HLMFCNKDVFPF-----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
+ K++ + + ++ ++ G C + E + EM + G + S
Sbjct: 271 EI----KNLLSYKGLRADVGTYCTLVLGLCKV-EEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ K N+ L +++K+ G+ VYNA+I+++ K + +A SL +M KG
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY------HAFLDIIRTGE 327
+ PN VTY+ LI CK KLD A +M + GI T+ Y H L +R +
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAK 445
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+F + M G +P Y LI + + + N F++++E++ G P+ ++TALI
Sbjct: 446 SLF---DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
L ++ EA++ + EM E ++P T +L
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 187/484 (38%), Gaps = 88/484 (18%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAIL 75
EM N++ E G S VS ++ +R F L K+ G A S Y+ +I +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGR----AIN 124
K K D A +L + M P+ VT ILI +C A+H +G+ I
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYS---ILIDSFCKRGKLDVALHFLGKMTEVGIK 422
Query: 125 A-FYAYK----------RFKFAVGIED-------------FQGLLSALCRYKNVQDAEHL 160
A Y Y + + A + D + L+S C+ + +A L
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
K + P NT +F +++G C+ EA +++ EM + + + V+++ +I +
Sbjct: 483 YHEMTGKGISP-NTYTFTALISGLCHA-NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM--------E 270
K N + L D+M G+ D Y +I L V +A M + E
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---- 326
+G PNVVTY +LI LCK +D+A EML P TY FLD + +
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660
Query: 327 ---------------------------------EEVFGLLESMRKMGCQPTNDTYIMLIK 353
+E +L +M G P +Y +I
Sbjct: 661 KAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ R K+W + G PD +Y LI+ + G+L +A + +M + + P
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 780
Query: 414 EPKT 417
T
Sbjct: 781 NRAT 784
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 161/400 (40%), Gaps = 54/400 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G + Y ++I+ K+ K A +L DEM P++V +L I
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL---IS 468
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
YC ++ A ++ + F L+S LC + +A L +V P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS--C----YSKARN 223
N ++N+++ G C G++ A + EM ++G+ D ++ +IS C S+AR
Sbjct: 529 -NEVTYNVLIEGHCKE-GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586
Query: 224 LHKVLRLFDQMKRMGIE-CDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPN--- 277
L+ +Q K IE C V Y A+I+ L K L+ A L + M PN
Sbjct: 587 FMNDLQ-GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645
Query: 278 -------------------------------VVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
VTYN LI+ CK ++ EA + M+
Sbjct: 646 YACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 705
Query: 307 RGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
GISP +Y + + R G+ E L ESM G P Y LI +
Sbjct: 706 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTK 765
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
F++ +++ G P+R++Y +LIH L + Y+
Sbjct: 766 AFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M GI + + S +++ + R L LFD++ G+ D VY AV+ +L + +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A ++ ME G +V TYN I+ LCK +++ EA + + + +G+ + TY
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 319 F------LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
++ GEE ++ M + G P+ L+ + G+ F + N++
Sbjct: 291 LVLGLCKVEEFEAGEE---MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ G P Y ALI+++ +GKL+EA + M K L P T +L D
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 186/437 (42%), Gaps = 56/437 (12%)
Query: 26 GIKVSSELVSEVL-SWVRND-WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
GIK + VL +RN W+ A F A G A R ++ +I + + +
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVF-RAMDACGVAPDVRSFNMLIGGFCRAGELEE 282
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A EMRG P +V+ L+ L R ++ A + F +
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLIGLFTRR---GEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 144 LLSALCRYKNVQDA-----EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ CR + +A E + F C DV +NT +LNG C S +AE +
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT-----LLNGLCKERRLS-DAEELLN 393
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-G 256
EM +RG+ D+ +F+ +I Y + N+ K L+ FD + + D YN +I + + G
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453
Query: 257 RL----------------------------------VKDAISLMKSMEEKGVAPNVVTYN 282
L V +A + + M KG+ PN++TYN
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKM 339
S+IK C++ + + +Q +M + P + TY+ + ++ G+ E F LL+ M
Sbjct: 514 SIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
QP TY M+I FS V+ ++ G PDR +Y ++I+ + G +++
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKS 633
Query: 400 HQYYMEMKEKQLLPEPK 416
Q + EM +K L P+ K
Sbjct: 634 FQLHDEMLQKGLAPDDK 650
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT + NI+++ +C + E + V EM +R + DVV+ + ++ +A ++ + L
Sbjct: 158 NTYTLNIMVHSYCKTLQFG-EVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D M GI+ YN+V+ L + A + ++M+ GVAP+V ++N LI C+
Sbjct: 217 IDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCR 276
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTNDT 347
A +L+EA + + EM R ++P + ++ + + R GE L MR+ G P
Sbjct: 277 AGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y M+I F R +V +E+ G PD +Y L++ L +L +A + EMK
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396
Query: 408 EKQLLPE 414
E+ + P+
Sbjct: 397 ERGVPPD 403
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 169/417 (40%), Gaps = 65/417 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI-LIR--RYCAVHDVGRAIN 124
++ M+ + + A ALID M P LVT ++L L+R R+ +V RA++
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--------CNKDVFPF------ 170
A A + F L+ CR +++A L F DV F
Sbjct: 257 AC------GVAPDVRSFNMLIGGFCRAGELEEA--LRFYKEMRGRRVTPDVVSFSCLIGL 308
Query: 171 ------------------------NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
+ + +++ G+C G EA RV EM G
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRA-GLMLEALRVRDEMVAFGCLP 367
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVV+++ +++ K R L L ++MK G+ D + +IH + ++ A+
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRT 325
++ ++ + P++VTYN+LI +C+ L +A + +D+M R I P TY +D
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G + F L+ M G P TY +IK + R + ++ + PD +Y
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL------------QDWSYNK 428
LIH GK+ EA M+ + + P+ T ++ DW Y K
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604
>gi|413932621|gb|AFW67172.1| PHD finger protein [Zea mays]
Length = 1166
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 17/385 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG----K 77
++ G ++++ LV++VL +R + + AF FF WA +Q GY H Y+ +I IL K
Sbjct: 460 LDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRYK 519
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
R+F ++D M+ G V + LL ++R Y H A R +
Sbjct: 520 SRQFGVLCNVLDHMK--RHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPE 577
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL A C+ V++AE + K N ++++ + GWC ++A +V
Sbjct: 578 TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRA-RDPKKAMKVLE 636
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR---KVYNAVIHALA 254
EM Q + ++ I + A + + LF+ M+ G+ K Y+ +I ALA
Sbjct: 637 EMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALA 696
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K +++ L+ M G P+V TY LI+ +C KLD A + DEM + G P I
Sbjct: 697 KADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFPPDIV 756
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
T+ R ++ L E M + C+P+ TY M++ F + + E+ +
Sbjct: 757 TH-------RKADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICLEMDKR 809
Query: 375 GNGPDRSSYTALIHALFLNGKLEEA 399
+Y +I+ LF G+ E A
Sbjct: 810 RCQRAIDTYEIMIYGLFDCGETEYA 834
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
RM + N ++ A K +VK+A ++ ++ K + N TY++L C+AR
Sbjct: 571 RMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG-NAETYSTLFFGWCRARDPK 629
Query: 296 EARQAFDEMLQRGISPTIRTY-HAFLDIIRTG--EEVFGLLESMRKMG---CQPTNDTYI 349
+A + +EM+Q +P TY A + G E L E MR G PT TY
Sbjct: 630 KAMKVLEEMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYS 689
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++I ++ + F++ +++ G PD ++Y LI + L GKL+ A++ EM
Sbjct: 690 IMIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRA 749
Query: 410 QLLPE 414
P+
Sbjct: 750 GFPPD 754
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 168/377 (44%), Gaps = 15/377 (3%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
S + H + +I LG K D A A+ +R + +L + + ++I+
Sbjct: 114 SDHPHPASDILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGR 173
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNT 172
V A + A + + + + L++A +DA +L CN +
Sbjct: 174 VSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLI---- 229
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N++LN + + + M RG+ D+ +++ +ISC + + + LF
Sbjct: 230 -TYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQ 288
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
QMK G D+ YNA++ K R ++A+ +++ ME G +P VTYNSLI K
Sbjct: 289 QMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGG 348
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEEVFGL--LESMRKMGCQPTNDTYI 349
L+EA +M+ +GI P + TY L + G++ F + MR +GC+P T+
Sbjct: 349 LLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFN 408
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LIK +F + KV+++I PD ++ L+ NG + + EMK
Sbjct: 409 ALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRA 468
Query: 410 QLLPEPKT-DELLQDWS 425
+ E T + L+ +S
Sbjct: 469 GFVAERDTFNTLISAYS 485
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 176/425 (41%), Gaps = 66/425 (15%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G++ ++ Y+++I+ K + A L +M P + T TLL
Sbjct: 328 NGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLL------SGFEK 381
Query: 119 VGR---AINAFYAYKRFKFAVGIEDFQGLL------SALCRYKNVQDAEHLMFCNKDVFP 169
G+ AI F + I F L+ V D L C+ D+
Sbjct: 382 AGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVT 441
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+NT NG + ++ EM + G + +F+ +IS YS+ + + +
Sbjct: 442 WNTLLAVFGQNGM------DSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMA 495
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
++ M G+ D YNAV+ ALA+G L + + ++ ME+ PN ++Y+SL+
Sbjct: 496 VYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA 555
Query: 290 KARKLD-----------------------------------EARQAFDEMLQRGISPTIR 314
++++ E +AF E+ +RGISP I
Sbjct: 556 NGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDIT 615
Query: 315 TYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
T +A L I + E+ + R P+ TY L+ +SR F ++
Sbjct: 616 TLNAMLSIYGRKQMVAKAHEILNFMHETR---FTPSLTTYNSLMYMYSRSENFQKSEEIL 672
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYN 427
E+ E G PDR SY +I+A NG+++EA + + EMK+ L+P+ T + + ++ +
Sbjct: 673 REVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAAD 732
Query: 428 KQFVE 432
F E
Sbjct: 733 SMFAE 737
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 189/462 (40%), Gaps = 40/462 (8%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWA--------GK- 57
+L + H S++ I+ G +L V WVR + F A GK
Sbjct: 112 LLSDHPHPASDILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKA 171
Query: 58 --------------QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
G Y +I ++ A L ++M+ P+L+T
Sbjct: 172 GRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITY 231
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
+++ Y + + A R + A + + L+S R ++A HL
Sbjct: 232 N---VVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQ 288
Query: 163 CNK-DVFPFNTKSFNIILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCY 218
K + F + ++N +L+ + G SR EA +V EM G V+++ +IS Y
Sbjct: 289 QMKLEGFTPDKVTYNALLD----VFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAY 344
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+K L + L L QM GI+ D Y ++ K AI + M G PN+
Sbjct: 345 AKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNI 404
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLES 335
T+N+LIK K E + FD++ SP I T++ L + +V G+ +
Sbjct: 405 CTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKE 464
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M++ G DT+ LI +SR F V+ + E G PD S+Y A++ AL G
Sbjct: 465 MKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGL 524
Query: 396 LEEAHQYYMEMKEKQLLP-EPKTDELLQDWSYNKQFVERQIA 436
E++ + EM++ + P E LL ++ K+ +ER A
Sbjct: 525 WEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKE-IERMNA 565
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 139/319 (43%), Gaps = 30/319 (9%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR---- 112
K++G+ ++T+I+ + FD A A+ M P L T +L + R
Sbjct: 466 KRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLW 525
Query: 113 -----YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
A + GR +Y S L Y N ++ E + +++
Sbjct: 526 EQSEKVLAEMEDGRCKPNELSYS---------------SLLHAYANGKEIERMNAFAEEI 570
Query: 168 FPFNTKSFNIILNGWCNIIGSSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + ++ ++L + S E ER ++E+ +RGI D+ + + ++S Y + + +
Sbjct: 571 YSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMV 630
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + + M YN++++ ++ + + +++ + EKG+ P+ ++YN++
Sbjct: 631 AKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTV 690
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGC 341
I C+ ++ EA + F EM + P + TY+ F+ E ++ M K GC
Sbjct: 691 IYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGC 750
Query: 342 QPTNDTYIMLIKKFSRWRQ 360
+P +TY ++ + + Q
Sbjct: 751 KPDQNTYNSIVDWYCKLDQ 769
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 171/419 (40%), Gaps = 48/419 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKV-RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR--- 112
+Q G + Y+ ++ + GK+ + AL++ MR P L T TL+ RR
Sbjct: 220 QQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSL 279
Query: 113 ----------------------YCAVHDV-GRAINAFYAYKRFK------FAVGIEDFQG 143
Y A+ DV G++ A K + F+ +
Sbjct: 280 YEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNS 339
Query: 144 LLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L+SA + +++A L +K + P + ++ +L+G+ G A +V++EM
Sbjct: 340 LISAYAKGGLLEEALDLKTQMVHKGIKP-DVFTYTTLLSGF-EKAGKDDFAIQVFLEMRA 397
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G ++ +F+ +I + +++++FD +K D +N ++ + +
Sbjct: 398 VGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQ 457
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ K M+ G T+N+LI + D+A + ML+ G+ P + TY+A L
Sbjct: 458 VSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLA 517
Query: 322 IIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ G E+ +L M C+P +Y L+ ++ G + N +E
Sbjct: 518 ALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYAN----GKEIERMNAFAEEIYSG 573
Query: 379 DRSSYTALIHALFL-NGK---LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
++ L+ L L N K L E + ++E++ + + P+ T + KQ V +
Sbjct: 574 SVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAK 632
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 108/231 (46%), Gaps = 5/231 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ + A +E+ G V +TL+++ + + + RA F
Sbjct: 547 YSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERA---FL 603
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+R + I +LS R + V A E L F ++ F + ++N ++ +
Sbjct: 604 ELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRS- 662
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+ +++E + E+ ++G+ D +S++ +I Y + + + R+F +MK + D Y
Sbjct: 663 ENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTY 722
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
N I A + +AI +++ M ++G P+ TYNS++ CK + EA
Sbjct: 723 NTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEA 773
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 23/365 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +A L + D A +++M PS+V +++ R G NA
Sbjct: 456 YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSR------AGFEDNAHK 509
Query: 128 AYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC 183
AYK F +L L + +Q+A L++ D P N +F ++L+G+
Sbjct: 510 AYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYF 569
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G + A +W EM RGIC D ++FS I SKA + + F +M + G +
Sbjct: 570 KV-GDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
VYN++IH L + +A+ L + M +KG+ P++ T N +I CK ++ A AF E
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAE 688
Query: 304 MLQRGISPTIRTYHAF-------LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
M G++P TY+ LD++ E L M G P TY + I+ F
Sbjct: 689 MHHIGVTPDTVTYNTLIGGYCKVLDMVSADE----FLNKMYASGWDPDITTYNIRIQGFC 744
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++ + +E+ G P+ +Y +++A+ L+ A ++ + +P
Sbjct: 745 SSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAV-CTDMLDRAMVLTAKLLKMAFVPNVV 803
Query: 417 TDELL 421
T +L
Sbjct: 804 TTNVL 808
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 166/414 (40%), Gaps = 79/414 (19%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPS----------------L 100
++ G S+ + +L +V + + W L+ M P L
Sbjct: 235 REVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYL 294
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++LL ++ ++C DV YAY A I R + HL
Sbjct: 295 RVAESLLFVMPKFCCEPDV-------YAYNILINAYRIRG---------RTSDALGFLHL 338
Query: 161 MF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
M C + F+T I+ +CN G+ EA +++ + + G+ +V ++ ++S
Sbjct: 339 MIKNGCKPSLITFST-----IITAFCNE-GNVVEARKIFEGIQEVGLSPNVAMYNTLMSG 392
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
Y KAR++ + L+++M+ GI D +N ++ K D+ L + + P+
Sbjct: 393 YFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPD 452
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEE-------- 328
Y+ + LC A +LDEA Q ++ML++G+ P++ +++ + R G E
Sbjct: 453 CSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYK 512
Query: 329 ---VFGLLES--------------------------MRKMGCQPTNDTYIMLIKKFSRWR 359
+FGL+ S M G + +L+ + +
Sbjct: 513 IMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVG 572
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+W E+ G PD +++A I L G +EEA++ + EM +K +P
Sbjct: 573 DTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 4/260 (1%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EH 159
V K +L+ Y V D A + +Y + F + L + V++A E
Sbjct: 556 VNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEA 615
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+K F N +N +++G CN G EA ++ EM Q+G+ D+ + + II+ +
Sbjct: 616 FSEMSKKGFVPNNFVYNSLIHGLCNC-GKLHEALKLEREMRQKGLLPDIFTTNIIINGFC 674
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K + F +M +G+ D YN +I K + A + M G P++
Sbjct: 675 KEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDIT 734
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMR 337
TYN I+ C ++K+ A DE++ G+ P TY+ ++ + T + L +
Sbjct: 735 TYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAKLL 794
Query: 338 KMGCQPTNDTYIMLIKKFSR 357
KM P T +L+ F +
Sbjct: 795 KMAFVPNVVTTNVLLSHFCK 814
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 123/314 (39%), Gaps = 42/314 (13%)
Query: 142 QGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
Q ++S + R + HL M+ N + + N ++ G+ N + E+ +
Sbjct: 175 QDVISWVIRRIGASRSAHLVEFMWANHHKYESDFSILNTLMRGFMNS-EMAYESLEILSR 233
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G+ + S + + + V +L M R G +N +I +
Sbjct: 234 MREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGY 293
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLI------------------------KP------- 287
++ A SL+ M + P+V YN LI KP
Sbjct: 294 LRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFST 353
Query: 288 ----LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMG 340
C + EAR+ F+ + + G+SP + Y+ + +V L E MR G
Sbjct: 354 IITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKG 413
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P T+ +L+ ++ + + ++++ + S + PD S Y + L G+L+EA
Sbjct: 414 IAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAM 473
Query: 401 QYYMEMKEKQLLPE 414
Q+ +M EK + P
Sbjct: 474 QFLEDMLEKGMPPS 487
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 178/381 (46%), Gaps = 12/381 (3%)
Query: 40 WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPS 99
W D EAA F K G T Y++MI GKV + D +EM+ P
Sbjct: 144 WKEGDIEAARGLFEEM-KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
++T + LI +C + + + + K+ + + L+ A C+ +Q A
Sbjct: 203 VITYNS---LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIK 259
Query: 160 LMFCNKDV--FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ V P N ++ +++ C IG+ +A R+ EM + G+ ++VV+++ +I
Sbjct: 260 FYVDMRRVGHVP-NEFTYTSLVDANCK-IGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
A + + +LF +M G+ + YNA+IH K + + A+ L+ ++ +G+ P+
Sbjct: 318 LCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPD 377
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--LLE 334
++ Y + I LC K++ A+ +EM + GI Y +D ++G G LLE
Sbjct: 378 LLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLN 393
M+++ + T T+ +LI + + + +S + G P+ + YTA+I L
Sbjct: 438 EMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKE 497
Query: 394 GKLEEAHQYYMEMKEKQLLPE 414
+++ A + +M ++ L+P+
Sbjct: 498 NQVKAATTLFEQMAQEGLVPD 518
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 155/356 (43%), Gaps = 24/356 (6%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
TR + ++ K+ K D +M G + P++ T ++ + + + + R +
Sbjct: 98 TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI-EAARGL- 155
Query: 125 AFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSF 175
++ KF I D + ++ + + D + M C DV +N+
Sbjct: 156 ----FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS--- 208
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++N +C G + + EM Q G+ +VVS+S ++ + K + + ++ + M+
Sbjct: 209 --LINCFCKS-GKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R+G + Y +++ A K + DA L M E GV NVVTY +LI LC A ++
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMK 325
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
EA + F +M+ G+ P + +Y+A + + + LL ++ G QP Y I
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI 385
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ V NE+ ENG + YT L+ A F +G E EM+E
Sbjct: 386 WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQE 441
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
VFP T+S N +L+ + + G + +R + +M G V +++ +I C K ++
Sbjct: 94 VFP-KTRSCNGLLHKFAKL-GKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEA 151
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
LF++MK G+ D YN++I K + D + + M+ P+V+TYNSLI
Sbjct: 152 ARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLIN 211
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
CK+ KL + + + EM Q G+ P + +Y +D ++ MR++G P
Sbjct: 212 CFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVP 271
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY L+ + + F++ NE+ E G + +YTALI L +++EA + +
Sbjct: 272 NEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLF 331
Query: 404 MEMKEKQLLP 413
+M ++P
Sbjct: 332 GKMVTAGVIP 341
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 13/301 (4%)
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNI 177
A F KRF+ GLL + + KD+ +K ++NI
Sbjct: 82 ATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF---KDMIGAGSKPTVFTYNI 138
Query: 178 ILNG-WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ W G A ++ EM RG+ D V+++ +I Y K L + F++MK
Sbjct: 139 MIDCMWKE--GDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
M E D YN++I+ K + + + M++ G+ PNVV+Y++L+ CK + +
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + + +M + G P TY + +D I + F L M ++G + TY LI
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ K++ ++ G P+ +SY ALIH ++ A + E+K + + P
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376
Query: 414 E 414
+
Sbjct: 377 D 377
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 159 HLMFCNKDVFPFNTKSFNIILNGW----CNIIGSSREAERVWMEMSQRGICYDVVS-FSC 213
H++FC + + N+ I+L+ C++ + +W S R +C F
Sbjct: 18 HILFCARMYYDANSILREIVLSKAELEECDVF------DELW---STRNVCVPGFGVFDA 68
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+ S L + + F +MKR + + N ++H AK K M G
Sbjct: 69 LFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAG 128
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----IIRTGEEV 329
P V TYN +I + K ++ AR F+EM RG+ P TY++ +D + R + V
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ E M+ M C+P TY LI F + + + + E+ ++G P+ SY+ L+ A
Sbjct: 189 Y-FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDA 247
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++A ++Y++M+ +P T L D
Sbjct: 248 FCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVD 281
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G EA + + +M + + S + ++ ++K V R F M G +
Sbjct: 76 LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFT 135
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I + K ++ A L + M+ +G+ P+ VTYNS+I K +LD+ F+EM
Sbjct: 136 YNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMK 195
Query: 306 QRGISPTIRTYHAFLD-IIRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
P + TY++ ++ ++G+ GL M++ G +P +Y L+ F +
Sbjct: 196 SMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQ 255
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
K + ++ G+ P+ +YT+L+ A G L +A + EM E
Sbjct: 256 QAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLE 301
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 4/254 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y+ +I K + D A L++E++G P L+ T I C +
Sbjct: 337 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF---IWGLCGLEK 393
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNI 177
+ A + + L+ A + N + HL+ +++ +F +
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C S+ + + G+ + ++ +I K + LF+QM +
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ DR Y +++ K + +A++L M E G+ +++ Y SL+ + +L +A
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573
Query: 298 RQAFDEMLQRGISP 311
R +EM+ I P
Sbjct: 574 RSFLEEMIGEEILP 587
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 6/255 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L + A L +M P+L + L I + ++ RA+
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNAL---IHGFVKAKNMDRALELLN 367
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
K + + + LC + ++ A+ +M ++ NT + +++ +
Sbjct: 368 ELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS- 426
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR-MGIECDRKV 245
G+ E + EM + VV+F +I K + + K + F +M G++ + V
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAV 486
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y A+I L K VK A +L + M ++G+ P+ Y SL+ K + EA D+M
Sbjct: 487 YTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMA 546
Query: 306 QRGISPTIRTYHAFL 320
+ G+ + Y + +
Sbjct: 547 EIGMKLDLLAYTSLV 561
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 10/234 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--ILIRRYCAVHDVGRAINA 125
Y T I L + K + A +++EM+ E G + TL+ L+ Y + ++
Sbjct: 381 YGTFIWGLCGLEKIEAAKVVMNEMQ--ENG---IKANTLIYTTLMDAYFKSGNPTEGLHL 435
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNGWC 183
+ V + F L+ LC+ K V A + F N + +++G C
Sbjct: 436 LEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLC 495
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ A ++ +M+Q G+ D +++ ++ K N+ + L L D+M +G++ D
Sbjct: 496 KE-NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDL 554
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
Y +++ ++ ++ A S ++ M + + P+ V ++K + +DEA
Sbjct: 555 LAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 164/345 (47%), Gaps = 16/345 (4%)
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
+L + + D A L+D + G PS LI++ CA GR +A +R
Sbjct: 76 VLVRRGELDDALRLVDSL-AGLNPPSPAAVGPCAALIKKLCAS---GRTADA----RRVL 127
Query: 134 FAVG--IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
A G + + +++ C + DA + + V P + ++N ++ G C G +
Sbjct: 128 AASGPDVMVYNAMVAGYCGAGQL-DAARRLVADMPVEP-DAYTYNTLIRGLCGR-GRTSN 184
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A V +M +RG DVV+++ ++ K + ++L D+M G D YN V++
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ + V+DA+ +K++ G PN V+YN ++K L A + ++A + +EM +G P
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ T++ + + R G E +LE M + GC P + +Y L+ F + ++ +
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G PD SY L+ AL NG+++ A + ++K+K P
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSP 409
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 159/348 (45%), Gaps = 18/348 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ K + A L+DEM P +VT +L I + V D +
Sbjct: 204 YTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLP 263
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+Y V + +L L + +DAE LM +K P N +FN++++ C
Sbjct: 264 SYGCEPNTV---SYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP-NVVTFNMLISFLCRR 319
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A V +M Q G + +S++ ++ + K + +HK + + M G D
Sbjct: 320 -GLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN ++ AL + V AI L+ +++KG +P +++YN++I L KA K EA + DEM
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 306 QRGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+G+ P I TY I +G EE ++ MG +PT Y ++ +
Sbjct: 439 SKGLQPDIITYST----IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKR 494
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
R+ N ++ + +G P+ S+YT L+ L G ++EA + + ++
Sbjct: 495 RETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 169/363 (46%), Gaps = 18/363 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L + A A++++M P +VT IL+ C +A+
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYT---ILLEATCKRSGYKQAMKLLD 225
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWC 183
A I + +L+ +C+ V+DA + K++ + NT S+NI+L G
Sbjct: 226 EMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFL---KNLPSYGCEPNTVSYNIVLKG-- 280
Query: 184 NIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ + R +AE++ EM+ +G +VV+F+ +IS + + + + +QM + G
Sbjct: 281 -LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YN ++HA K + + A+ ++ M +G P++V+YN+L+ LC+ ++D A +
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++ +G SP + +Y+ +D + + G +E LL+ M G QP TY + R
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + ++ + G P + Y A++ L + A + M +P T
Sbjct: 460 DRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTY 519
Query: 419 ELL 421
+L
Sbjct: 520 TIL 522
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERV 195
I + LL+ALCR V A L+ KD P S+N +++G G ++EA +
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV-LISYNTVIDGLTKA-GKTKEALEL 433
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM+ +G+ D++++S I S + + + +R F +++ MGI +YNA++ L K
Sbjct: 434 LDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCK 493
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
R +AI L M G PN TY L++ L + EAR+ F ++ RG+
Sbjct: 494 RRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 7/215 (3%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D VYNA++ + A L+ M V P+ TYN+LI+ LC + A
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 302 DEMLQRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++M +RG P + TY L+ R+G ++ LL+ M GC P TY +++ +
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + + G P+ SY ++ LF + E+A + EM K P T
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+L + + VE + L+ PQ G +S
Sbjct: 310 NMLISFLCRRGLVEPAMEVLE-QMPQYGCTPNSLS 343
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G ++ Y+ ++ K +K A ++ M P +V+ TLL + C
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL---CRNG 390
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V AI + K + + + ++ L + ++A L+ +K + P + ++
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQP-DIITY 449
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ I +G C EA R + ++ GI ++ I+ K R H + LF M
Sbjct: 450 STIASGLCRE-DRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMI 508
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
G + Y ++ LA LVK+A L + +GV
Sbjct: 509 SSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 19/345 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
YH+++ G + D A + +M P VT ILI + + RA +
Sbjct: 173 YHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYN---ILIDAFGKTGQLERAFDFVG 229
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILN--GWCN 184
+ F V + LLS+L R ++Q L K N ++ I++ GW
Sbjct: 230 KSRSFTNEV---TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWA- 285
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G + ++++EM I YD+V+ + ++ C SKA + LF MK G+ D
Sbjct: 286 --GRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTV 343
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I+ L + + A +L+ MEE G APN++TYN+LI K L A + F EM
Sbjct: 344 TYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEM 403
Query: 305 LQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+RG++P + +Y + ++ RT + L M+ GC P + TY +LI R +
Sbjct: 404 KERGVAPNVVSYSSLIEGFGKAGRT-DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGR 462
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
FG + E+ + G + + + L+ +EEA ++ E
Sbjct: 463 FGAAMEYLREMRDAGCQMGKVTKSLLVR--IPPQYMEEAQSFFQE 505
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 13/283 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN--GWCNIIGSSREAERVWMEMSQ 201
LL A RY +VQ M KD +T+ FN +++ G N++ + + + +
Sbjct: 4 LLGAARRYDDVQRLVESM--QKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGG 61
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
R Y ++S +I + K ++ L ++ QM + D +N +I +LAK V++
Sbjct: 62 RPTAY---TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEE 118
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A ++ M + V+P+V TY LI+ L ++D + F+ M +G P + TYH+ +
Sbjct: 119 ACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMH 178
Query: 322 IIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +E + + M + G QP TY +LI F + Q F + ++ +
Sbjct: 179 AFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDF---VGKSRSFT 235
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ +Y +L+ +L G ++ + + +MK K L+ T +L
Sbjct: 236 NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAIL 278
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 163/366 (44%), Gaps = 15/366 (4%)
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H+T ++ +I L K + + A + +M P + T ILIR + +
Sbjct: 100 HTT--FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYT---ILIRSLGTIGRIDAV 154
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
+ F + + + ++ A V +A + K + P + ++NI+++
Sbjct: 155 MKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQP-DAVTYNILID 213
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ G + + ER + + + + V+++ ++S + ++ ++ LF QMK G+
Sbjct: 214 AF----GKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLV 269
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ Y +I L V+D L M + + ++VT N+++ L KA +++ A +
Sbjct: 270 SNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFEL 329
Query: 301 FDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F +M +G++ TY+ ++ + R G + LL M + GC P TY LI + +
Sbjct: 330 FQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
W +++ E+ E G P+ SY++LI G+ + A + EMK + P T
Sbjct: 390 WSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVT 449
Query: 418 DELLQD 423
LL D
Sbjct: 450 YNLLID 455
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 164/356 (46%), Gaps = 13/356 (3%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
M+ +LG R++D L++ M+ T + Q LI Y + + +A+ A+
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTK---LDTQLFNTLIHIYGEANMMEKALQTLAAFT 57
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKSFNIILNGWCNIIGS 188
+ + ++ + +VQ+ LM+ K F + +FNI+++
Sbjct: 58 KEGGRPTAYTYSSMIQVFMKGGDVQNG-LLMYKQMLKAKFVPDHTTFNILIDSLAK-ADQ 115
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EA V+ +M + + DV +++ +I + V++LF+ M G + + Y++
Sbjct: 116 VEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHS 175
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
V+HA V +A + + M +KG+ P+ VTYN LI K +L+ +AFD + +
Sbjct: 176 VMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE---RAFDFVGKSR 232
Query: 309 ISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
TY++ L + ++ GL+E M+ G TY +LI++ + +V+
Sbjct: 233 SFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVW 292
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+++ E+ +N D + ++ L G++E A + + +MK K L + T +L
Sbjct: 293 QLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNIL 348
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+++ AR V RL + M++ + D +++N +IH + +++ A+ + + ++G
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVF 330
P TY+S+I+ K + + +ML+ P T++ +D + EE
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ M K+ P TY +LI+ + V K++ ++ G P+ +Y +++HA
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G+++EA + +M +K L P+ T +L D
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILID 213
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y +I LG + + W L EM + +VT +L + +
Sbjct: 264 KAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSK---- 319
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
GR AF ++ K F+GL N D T ++N
Sbjct: 320 --AGRVEAAFELFQDMK-------FKGL-------------------NAD-----TVTYN 346
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++NG G A + +EM + G ++++++ +IS Y K NL RLF +MK
Sbjct: 347 ILINGLGR-AGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKE 405
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + Y+++I K AISL + M+ +G PN VTYN LI L +A +
Sbjct: 406 RGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGA 465
Query: 297 ARQAFDEMLQRG 308
A + EM G
Sbjct: 466 AMEYLREMRDAG 477
>gi|326504240|dbj|BAJ90952.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R ++ L +M GIE D Y+ ++H ++ + + + +SM+++G+ P V TY
Sbjct: 18 RTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATY 77
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-- 339
S+IK L +L++A EM+ G+ P+ TY+ F R ++V G LE KM
Sbjct: 78 TSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKA 137
Query: 340 GCQPTND---TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
C PT +Y +L+ F + + V ++WN++ E GPD SYT L+H K
Sbjct: 138 PCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKW 197
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELL 421
EA Q++MEM EK LP+ T E L
Sbjct: 198 REACQFFMEMIEKGFLPQKITFETL 222
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 22/252 (8%)
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
R + A L+ EM P + + I++ Y H + F + K +
Sbjct: 18 RTVNAAENLLKEMNDRGIEPDVTSYS---IILHVYSRAHKAELCLCMFRSMKDRGICPTV 74
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN---GWCNIIGSSREAE 193
+ ++ L ++DAE L+ ++ V P + ++N G ++ G+
Sbjct: 75 ATYTSVIKCLASCGRLEDAESLLGEMVSEGVCP-SPATYNCFFKEYRGRKDVSGALELYN 133
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ S D+ S++ ++ + K V+ L++ M + D Y ++H
Sbjct: 134 KMKAPCSPTAP--DIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGF 191
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA----------RKLDEARQAF-D 302
++A M EKG P +T+ +L + L +A +++DE F D
Sbjct: 192 CAKEKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEESAKFGD 251
Query: 303 EMLQRGISPTIR 314
E I P R
Sbjct: 252 EYKSYHIKPYKR 263
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 7/292 (2%)
Query: 143 GLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ LC+ + A L D + N ++ +++G+C +R AE + M
Sbjct: 341 ALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNR-AEMLLSRMK 399
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
++G+ + +++C+I +SKA N K L D M + G + YNA I +L K
Sbjct: 400 EQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFL 459
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A L+K G+ + VTY LI LC+ EA F +M + G+ P + TY+ +
Sbjct: 460 EACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLI 519
Query: 321 DII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
R EE L +G PT +TY +I + R R K +N +S++G
Sbjct: 520 AAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCT 579
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
PD +Y ALI L KL+EA Q Y M +K L P T L + Y KQ
Sbjct: 580 PDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT-RLTLAYEYCKQ 630
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 160/360 (44%), Gaps = 23/360 (6%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E AF FL + Y + Y +MI K K + A L+ M+ P+ +T
Sbjct: 353 EKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN---TKT 409
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
LI + + +A + F+ I + + +LC+ +A L+ K
Sbjct: 410 YTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL---K 466
Query: 166 DVFPF----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
F +T ++ I+++ C +REA + +M + G+ D+ +++ +I+ +S+
Sbjct: 467 KGFRLGLQADTVTYTILISELCRR-ADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQ 525
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + +LF + +G+ ++ Y ++I + R V A+ M + G P+ +TY
Sbjct: 526 RRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTY 585
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISP------TIRTYHAFLDIIRTGEEVFGLLES 335
+LI LCK KLDEA Q ++ M+ +G+SP T+ + D T + L+
Sbjct: 586 GALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLD- 644
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
+K+ + N LI+K R+ G ++++ + DR + TA A + + K
Sbjct: 645 -KKLWIRTVNT----LIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNK 699
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 5/236 (2%)
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
++ N + G +G AE V+ EM RG+C D VS+ + Y + + R
Sbjct: 194 LTVRTLNCV-TGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDR 252
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
M R G D +I + E G+ PN++ + SLI LC
Sbjct: 253 WLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLC 312
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL-LESMRKMGCQPTN 345
K + +A + +EM+++G P + T+ A +D + + G E+ F L L+ +R +P
Sbjct: 313 KRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNV 372
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
TY +I + + + + + + E G P+ +YT LI G E+A++
Sbjct: 373 HTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYE 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++ S+ ++ +C + G + +R +M +RG D + + +IS + + +V
Sbjct: 230 DSVSYKLMAIAYCRM-GRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWY 288
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD+ +G++ + + ++I+ L K +K A +++ M +KG PNV T+ +LI LCK
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCK 348
Query: 291 ARKLDEARQAFDEMLQR-GISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQP 343
++A + F ++++ P + TY + + D + E LL M++ G P
Sbjct: 349 KGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEM---LLSRMKEQGLVP 405
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
TY LI S+ F +++ + + + G + +Y A I +L G+ EA
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEA 461
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 4/242 (1%)
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
IG +EA + +EM G+ V + +C+ + + +FD+M+ G+ D
Sbjct: 174 IGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVS 233
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y + A + + D +K M +G + T +I C+ FD+ +
Sbjct: 234 YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWV 293
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ G+ P + + + ++ + + G ++ F +LE M K G +P T+ LI +
Sbjct: 294 ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTE 353
Query: 363 NVFKVWNEISENGN-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
F+++ ++ + + P+ +YT++IH KL A MKE+ L+P KT L
Sbjct: 354 KAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCL 413
Query: 422 QD 423
D
Sbjct: 414 ID 415
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+V + ++ A+ ++A++++ ME G+ V T N + + + A FDE
Sbjct: 162 EVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE 221
Query: 304 MLQRGISPTIRTYHAF-LDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M RG+ P +Y + R G + L+ M + G N T ++I F
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
VF +++ E G P+ ++T+LI+ L G +++A + EM +K P T
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTA 341
Query: 421 LQDWSYNKQFVER 433
L D K + E+
Sbjct: 342 LIDGLCKKGWTEK 354
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 42/374 (11%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF----------------- 126
A+ + +M+ P+L+T TLL + RY + H V + AF
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213
Query: 127 --YAY---KRFKFAVGIEDFQG-------------LLSALCRYKNVQDAEHLMFCNKD-- 166
Y Y +FK AV + G +L LC+ + DA L+ K
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P N ++NI++ G+C + G +EA V M+Q + DV +++ +I+ + +
Sbjct: 274 LLP-NRNTYNILVYGYCKM-GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEE 331
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+L D+M+ + + D YN +I+ + + +A L++ M EKGV PN VT+N ++K
Sbjct: 332 AFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVK 391
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQP 343
CK K+D+A +M + G SP TY+ ++ + G E F ++ M + +
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ T +++ R ++ +K+ + + G D SY LI F +G ++ A + +
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLW 511
Query: 404 MEMKEKQLLPEPKT 417
EMKEK+++P T
Sbjct: 512 DEMKEKEIIPSTVT 525
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 171/395 (43%), Gaps = 49/395 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-------------------- 107
Y+ +I L + + A+ L DEM + P +V+ TL+
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
I+++ YC + A N + F+ + L++ C+ N+
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435
Query: 156 DAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+A M + ++ + N IL C EA ++ +RG D VS+ +
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCR-EKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I Y K N+ + L+L+D+MK I YN +I L + + AIS + + E G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
P+ TYN+++ C+ +++A Q ++M++ P + T +I+ G + G+LE
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT----CNILLRGLCMEGVLE 610
Query: 335 SMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
K+ G TY LI + + + F + +E+ E GPD +Y A+I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
AL +G++ EA ++ +M EK LP D++LQ
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGNLP----DQVLQ 701
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 44/402 (10%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ N ++ A F GK + + Y+T++ L K + A L+ +M+ P+
Sbjct: 220 LENKFKDAVEFLNVMGKYNCSPDNVT-YNTILDTLCKKGRLGDARDLLMDMKSRGLLPN- 277
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ T IL+ YC + + A N + + + L++ LC +++A L
Sbjct: 278 --RNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 161 M--FCNKDVFPFNTKSFNIILNG---WCNII----------------------------- 186
N + P + S+N ++NG W I
Sbjct: 336 RDEMENLKLLP-DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 187 --GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +A +M + G D V+++ +I+ Y KA N+ + R D+M R ++ D
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
N ++ L + + +++A L+ S ++G + V+Y +LI K +D A + +DEM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 305 LQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ I P+ TY+ + + + G E+ L + + G P TY ++ + R
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
F+ N++ EN PD + L+ L + G LE+A + +
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLF 616
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 166/439 (37%), Gaps = 69/439 (15%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
R EM N + + L++ L W + AF L + G + ++ M+
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSK--ISEAFKL-LEEMSEKGVKPNAVTHNIMVKW 392
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K K D A I +M P VT TL I YC ++G A R
Sbjct: 393 YCKEGKMDDASNTITKMEESGFSPDCVTYNTL---INGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ +L LCR K +++A L+ K + + S+ ++ G+ G+ A
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD-GNVDRAL 508
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA- 252
++W EM ++ I V+++CII + + + +++ G+ D YN ++H
Sbjct: 509 KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGY 568
Query: 253 ----------------------------------LAKGRLVKDAISLMKSMEEKGVAPNV 278
L +++ A+ L + KG A +
Sbjct: 569 CREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDT 628
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRK 338
VTYN+LI LCK +LD+A EM ++ + P TY+A + + + E M K
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688
Query: 339 M---GCQPT-------NDTYIML----------------IKKFSRWRQFGNVFKVWNEIS 372
M G P N+T + IK+ ++ + +++ E
Sbjct: 689 MLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESK 748
Query: 373 ENGNGPDRSSYTALIHALF 391
+ G D+S+Y L+ L
Sbjct: 749 QKGITVDKSTYINLMDGLI 767
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F+ ++GI + +N VI+ KDA+ + M + +P+ VTYN+++ LCK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCK 255
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDT 347
+L +AR +M RG+ P TY+ + + G +E ++E M + P T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y MLI + FK+ +E+ PD SY LI+ K+ EA + EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 408 EKQLLPEPKTDELLQDW 424
EK + P T ++ W
Sbjct: 376 EKGVKPNAVTHNIMVKW 392
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK---ARKLDEARQ 299
+ + + I A + A + K M+ + PN++T N+L+ L + + + +R+
Sbjct: 135 KALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE 194
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLI 352
AF++ ++ GI P + T+ +I+ G ++ L M K C P N TY ++
Sbjct: 195 AFNDAIKLGIVPNVNTF----NIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + G+ + ++ G P+R++Y L++ G L+EA M + LL
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 413 PEPKTDELLQDWSYN 427
P+ W+YN
Sbjct: 311 PDV--------WTYN 317
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 8/350 (2%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S Y MI L + A L+++M P++V ILI Y + + A
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS---ILIMAYASEGRIEEAR 493
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGW 182
A I + ++S L + +++A +L+ + +F + G+
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G EA + + EM G+ + ++ +I+ + KA NL + L +F ++ +G+ D
Sbjct: 554 SKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ +A IH L K V++A+ + ++EKG+ P+V TY+SLI CK ++++A + D
Sbjct: 613 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 672
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EM +GI+P I Y+A +D + ++G+ L + M + G +P + TY +I + +
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F +++E+ G P Y AL+H G +E+A + EM +K
Sbjct: 733 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 10/362 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y + A L + ++ + A +EM+ P L+ R +
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+V R + + + + + L+ LC++ ++ A ++ P N+++F
Sbjct: 351 EVLRIKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP-NSRTF 406
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ G+C R E + EM +R + VS+ +I+ ++L +L ++M
Sbjct: 407 CLLIEGYCREHNMGRALE-LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 465
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ + VY+ +I A A +++A L+ M GVAP++ YN++I L KA K++
Sbjct: 466 FSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 525
Query: 296 EARQAFDEMLQRGISPTIRTYHAF-LDIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
EA E+ RG+ P T+ AF L +TG+ E + M G P N Y +LI
Sbjct: 526 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 585
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++ + G PD + +A IH L NG+++EA + + E+KEK L+
Sbjct: 586 NGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 645
Query: 413 PE 414
P+
Sbjct: 646 PD 647
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 8/308 (2%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFN 176
V A+ F K + + L+S C+ V+ A H C K + P N +N
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP-NIFIYN 687
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G C G + A +++ M ++G+ D V++S +I Y K+ N+ + LF +M
Sbjct: 688 ALVDGLCKS-GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ VYNA++H K ++ A++L + M +KG A +++N+LI CK+ K+ E
Sbjct: 747 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQE 805
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A Q F EM+ + I P TY +D + G EE L + M++ TY L+
Sbjct: 806 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++ Q VF ++ ++ G PD +Y +I+A L EA + E+ K +L
Sbjct: 866 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925
Query: 414 EPKTDELL 421
+ +LL
Sbjct: 926 KGTIHDLL 933
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 144 LLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ +C+ ++ +A L K + P NT ++ II G C EA+ + EM +
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVP-NTYTYTIITAGLCRA-KRMNEAKLTFEEMQK 326
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G+ D + S +I + + ++ +VLR+ D M GI + YN +IH L K ++
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 386
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A ++K M G PN T+ LI+ C+ + A + DEM +R + P+ +Y A ++
Sbjct: 387 AAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 446
Query: 322 IIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +++ LLE M G +P Y +LI ++ + ++ + +S +G P
Sbjct: 447 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D Y A+I L GK+EEA Y +E++ + L P+ T
Sbjct: 507 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 545
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 4/253 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++N++++G C G +A + M G + +F +I Y + N+ +
Sbjct: 364 IPINLITYNVLIHGLCKF-GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L D+M++ + Y A+I+ L + + A L++ M G+ PNVV Y+ LI
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
+++EAR+ D M G++P I Y+A + + EE L ++ G +P
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T+ I +S+ + K ++E+ ++G P+ YT LI+ F G L EA +
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602
Query: 405 EMKEKQLLPEPKT 417
+ +LP+ +T
Sbjct: 603 RLHALGVLPDVQT 615
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+V+ M + +DV +++ ++ K +L R+ +M G+ + +Y+ VI +
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGM 273
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ + +A+ L +SM EKG+ PN TY + LC+A++++EA+ F+EM + G+ P
Sbjct: 274 CQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY 333
Query: 314 RTYHAFLD-IIRTG--EEV----------------------------FG-------LLES 335
A +D +R G +EV FG +L+
Sbjct: 334 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKG 393
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M +GC+P + T+ +LI+ + R G ++ +E+ + P SY A+I+ L
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453
Query: 396 LEEAHQYYMEMKEKQLLP 413
L A++ +M L P
Sbjct: 454 LSLANKLLEKMTFSGLKP 471
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 162/404 (40%), Gaps = 70/404 (17%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL----------- 107
SG A Y+ +I+ L K K + A + E++G P VT +
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561
Query: 108 ---------------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
+LI + ++ A++ F ++ +
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621
Query: 147 ALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
L + VQ+A + K + P + +++ +++G+C G +A + EM +GI
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQ-GEVEKAFELHDEMCLKGI 679
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
++ ++ ++ K+ ++ + +LFD M G+E D Y+ +I K V +A S
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
L M KGV P+ YN+L+ CK +++A F EMLQ+G + T+
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL----------- 788
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
++ LI + + + +++ E+ PD +YT
Sbjct: 789 ----------------------SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+I GK+EEA+ + EM+E+ L+ + T L + YNK
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM-YGYNK 869
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 19/304 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y TMI K A++L EM P L + C
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL---VHGCCKEG 767
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ +A+N F + FA + F L+ C+ +Q+A L K + P +
Sbjct: 768 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+I W G EA ++ EM +R + D V+++ ++ Y+K +V LF++M
Sbjct: 827 TVI--DWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ D Y VI+A K + +A L + KG+ ++ LI LCK L
Sbjct: 885 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944
Query: 296 EARQAFDEMLQRGISPT-------IRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
EA + DEM + G+ P+ +R++H + +E + E ++ +G P T
Sbjct: 945 EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKM----DEATRVFEGVKSLGLVPDTTTL 1000
Query: 349 IMLI 352
I L+
Sbjct: 1001 IDLV 1004
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 20/347 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y+ ++ L K A L D M P VT T+ I YC +V
Sbjct: 678 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM---IDGYCKSENV 734
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A + F+ + L+ C+ +++ A +L T SFN ++
Sbjct: 735 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLI 794
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C +EA +++ EM + I D V+++ +I + KA + + LF +M+ +
Sbjct: 795 DGYCKSC-KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D Y ++++ K + +L + M KGV P+ VTY +I CK L EA +
Sbjct: 854 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 913
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLI 352
DE++ +G+ T T H D++ T E LL+ M ++G +P+ L+
Sbjct: 914 LRDEVVGKGML-TKGTIH---DLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+ F + +V+ + G PD ++ L+ NG L +
Sbjct: 970 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV-----NGNLNDT 1011
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 176/362 (48%), Gaps = 30/362 (8%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ +++ L K++ + ++L ++MR +G S + TL IL+ C V+ +
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMR--LSGLS-SDRCTLNILLNCLCNVNRLREGF 124
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNI 177
AF R ++ I + L+ LC + +A L C DV + T
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT----- 179
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICY------DVVSFSCIISCYSKARNLHKVLRLF 231
++ G C G+ A ++ EM Y +V++++ I+ K + +LF
Sbjct: 180 LIKGLCG-TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
++MK G+ YN++IH +++ L+ M ++G+ P++VT+N LI LCK
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTN 345
K+ EA++ M++ GI P + TY++ ++ + + E+F SM GC+P
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF---VSMPSKGCEPDV 355
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+Y +LI +S+ + K++NE+ G P+ +Y +L+ +FL GK+++A + +
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415
Query: 406 MK 407
MK
Sbjct: 416 MK 417
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 164/362 (45%), Gaps = 10/362 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L KV + D A L +EM+ PS+++ +L I +C +
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL---IHGFCCAGKWEESKRLLD 274
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ LC+ V +A+ L+ + P + ++N ++ G+C +
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP-DLVTYNSLIEGFC-M 332
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G A +++ M +G DV+S++ +I+ YSK + + ++L+++M +G +
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y++++ + V DA L M+ G+A N TY + LCK L EA + F E+
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
I + +D + + G E + L E + G +P TY ++I F R Q
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ ++ NG PD +Y L+ + + KLEE Q M +K + P+ T ++
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572
Query: 423 DW 424
D
Sbjct: 573 DM 574
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 169/390 (43%), Gaps = 16/390 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGG------ETGPSLVTKQTLLILIRRY 113
G Y T+I L + A L EM P+++T I++
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYN---IIVDGL 225
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
C V A F K I + L+ C ++++ L+ ++ + P +
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP-D 284
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+FN++++ C G EA+++ M + GI D+V+++ +I + +L+ LF
Sbjct: 285 MVTFNVLIDTLCKE-GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 343
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M G E D YN +I+ +K V++A+ L M G PNV+TY+SL+K + A
Sbjct: 344 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 403
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTY 348
K+D+A++ F M GI+ TY FLD + + E L ++ + +
Sbjct: 404 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI + + ++++ ++S G+ P+ +YT +IH G++++A+ +M+
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 523
Query: 409 KQLLPEPKTDELLQDWSYNKQFVERQIASL 438
P+ T L Y +E + L
Sbjct: 524 NGCTPDIITYNTLMRGFYESNKLEEVVQLL 553
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF+ ++S +K ++ +V L++QM+ G+ DR N +++ L +++ + +
Sbjct: 71 SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEE 328
+G +PN+VTYN+LIK LC ++ EA + F M + G +P + TY + + TG
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 329 VFGL------LESMRK--MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
L L + + + C+P TY +++ + + +++ E+ G P
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSI 250
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
SY +LIH GK EE+ + EM ++ L P+ T +L D
Sbjct: 251 ISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLID 293
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
SFN +L+G I S + ++ +M G+ D + + +++C L + F
Sbjct: 71 SFNHLLSGLAKIKHYS-QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAG 129
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ R G + YN +I L + +A L M++ G P+VVTY +LIK LC
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN 189
Query: 294 LDEARQAFDEML------QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
++ A + EML + P + TY+ +D + + G +E L E M+ G P+
Sbjct: 190 INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS 249
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y LI F ++ ++ +E+ + G PD ++ LI L GK+ EA +
Sbjct: 250 IISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 309
Query: 405 EMKEKQLLPE 414
M E ++P+
Sbjct: 310 VMIESGIVPD 319
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 5/295 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG Y+++I V ++A L M P +++ +LI Y
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN---VLINGYSKTL 369
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFN 176
V A+ + + + LL + V DA+ L K N+ ++
Sbjct: 370 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 429
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I L+G C EA +++ E+ ++ + +C+I KA L LF+++
Sbjct: 430 IFLDGLCKN-DCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSN 488
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G E + Y +IH + V A L++ ME G P+++TYN+L++ ++ KL+E
Sbjct: 489 EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE 548
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
Q M Q+ +SP T +D++ E+ L + + Q D ++++
Sbjct: 549 VVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLLM 603
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L F M R +N ++ LAK + SL M G++ + T N L+
Sbjct: 54 LHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNC 113
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
LC +L E AF +L+RG SP I TY+ + + E L M+K+GC P
Sbjct: 114 LCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPD 173
Query: 345 NDTYIMLIKKFSRWRQFGNVFKV----WNEIS--ENGNGPDRSSYTALIHALFLNGKLEE 398
TY LIK K+ N+IS E P+ +Y ++ L G+ +E
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE 233
Query: 399 AHQYYMEMKEKQLLP 413
A Q + EMK + ++P
Sbjct: 234 AKQLFEEMKTQGMIP 248
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 173/364 (47%), Gaps = 13/364 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G+ Y TM+ +L K + + A + DEMR ++ TL+ R YC
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLM---RGYCLR 310
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC-RYKNVQDAEHL--MFCNKDVFPFNTK 173
+VG A+N F + V + G+L C + Q A L + + P +T
Sbjct: 311 QEVGNALNLFKETLKDGI-VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP-STF 368
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+++L G N ++A ++ EM+ G+ DV +++ +I + +A L + L LFD+
Sbjct: 369 ELSLVLKGLLND-RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDR 426
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ G++ YN+++ K + +A+ L M +G PNVVTY +L++ +
Sbjct: 427 MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKD 486
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIM 350
D A DEM Q G+S TY+ ++ I + EV G+L+S G PT TY
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I F + G+ F V+ ++ E G P+ +YT+ I G + A + +++ +
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 411 LLPE 414
L P+
Sbjct: 607 LQPD 610
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 177/409 (43%), Gaps = 12/409 (2%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREY 68
+ K E+ ++ G+ S+ +S VL + ND W+ A F SG Y
Sbjct: 347 MTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA-DSGLP-DVFTY 404
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +I + K A L D M+ PS+ T +LL+ YC + A+ +
Sbjct: 405 NNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLM---GYCKKGCMDEAVKLYSE 461
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIG 187
F + + L+ K+ +A L+ ++ N ++N+++NG C ++
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC-MVD 520
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E + + G +++++ II+ + KA + ++ QM+ G+ + Y
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYT 580
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+ I + A+ ++ + +G+ P++V YN+LI C+ + A Q +L+
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKD 640
Query: 308 GISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G++P Y++ + + +EV ESM K G TY LI FS+
Sbjct: 641 GLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++++E+ G PD ++TAL H L +G ++ A + EM+ + P
Sbjct: 701 LELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L G+C G EA +++ EM G +VV++ ++ Y ++ L D+
Sbjct: 438 TYNSLLMGYCKK-GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE 496
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ G+ C+ YN +I+ + V + ++KS +G P ++TYNS+I KA
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ A + +M ++G+ P I TY +F+D RTG + +L +R+ G QP Y
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + + ++ + ++G P+ Y +LI ++E ++Y M +
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676
Query: 411 LLPEPKTDELLQD 423
++ + T L D
Sbjct: 677 IVADTSTYTTLID 689
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 155/337 (45%), Gaps = 8/337 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T++ + FD A+AL+DEM+ + G S T +LI C V V
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK--QNGVS-CNDYTYNVLINGICMVDRV 522
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNII 178
++ F + + +++ + + A + + P N ++
Sbjct: 523 CEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSF 582
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++G+C G S A ++ ++ +RG+ D+V+++ +I+ + + N+ L+L + + G
Sbjct: 583 IDGYCRT-GCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + VYN++I ++K+ +SM + G+ + TY +LI K + A
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKF 355
+ + EM+ +G P T+ A + ++ G LLE MR++ +P Y MLI +
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
R + F++ +E+ G PD ++Y L+ FL
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFL 798
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
S+++A ++MEM RG D F ++S K +RLFD+M I+ D++VY
Sbjct: 172 SAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYA 231
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM--- 304
I AL K A+ +++ M+E G TY +++ L K +++EA + DEM
Sbjct: 232 LAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDA 291
Query: 305 --------------------------------LQRGISPTIRTYHAFL---DIIRTGEEV 329
L+ GI PT Y + D + ++
Sbjct: 292 GKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKA 351
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ L M G P+ +++K R++ + ++ E++++G PD +Y LIH
Sbjct: 352 YELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHW 410
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIASLKAHQPQSGQN 448
KL EA + MK+ + P T + LL Y K+ + L + P G
Sbjct: 411 HCQAHKLREALNLFDRMKKAGVKPSINTYNSLL--MGYCKKGCMDEAVKLYSEMPMEGFK 468
Query: 449 TRVIS 453
V++
Sbjct: 469 PNVVT 473
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A + M RG+ D+ S + ++ ++ + L LF +M+ G D +++A++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
A K + +DA+ L M + P+ Y I LCK A + EM + G
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 312 TIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY +D+ ++TG EE + + MR G + L++ + ++ GN ++
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
E ++G P + Y LI G ++A++ +M + LLP
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 172/401 (42%), Gaps = 53/401 (13%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+++ ++ K++ + TA +L + P L+T L ILI +C + + +
Sbjct: 61 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT---LNILINCFCHMGQITFGFSVL 117
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ A H F +K + F N S+ ++NG C
Sbjct: 118 AKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH--FHDKLLAQGFQLNQVSYATLINGVC 175
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G +R A + ++ R DVV ++ II K + + + LF +M GI D
Sbjct: 176 KI-GDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN +I+ +K+AI L+ M K + PNV TYN L+ LCK K+ EA+
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 304 MLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
ML+ + P + TY +D ++ + VF +M MG P TY +LI F +
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF---NAMSLMGVTPDVHTYTILINGFCK 351
Query: 358 WRQFG---NVFK-----------------------------VWNEISE---NGNGPDRSS 382
+ N+FK VW+ I E G D +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y++LI L NG L+ A + +MK++++ P T +L D
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 10/365 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I + K+ A + ++ G T P +V T+ I C V
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI---IDAMCKYQLV 215
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + + + L+ C +++A L+ K + P N ++NI
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP-NVYTYNI 274
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EA+ V M + + DV+++S ++ Y + K +F+ M M
Sbjct: 275 LVDALCKE-GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y +I+ K ++V +A++L K M +K + P +VTY+SLI LCK+ ++
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
DEM RG + TY + +D + + G + L M+ +P T+ +L+
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + +V+ ++ G + +Y +I+ G LEEA +M++ +P
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 415 PKTDE 419
T E
Sbjct: 514 AFTFE 518
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K K A +++ M P ++T TL+ Y V++V +A + F
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM---DGYFLVYEVKKAQHVFN 328
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A + + L++ C+ K V +A +L K++ P +++ +++G C
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLC-- 385
Query: 186 IGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
S VW EM RG DV+++S +I K +L + + LF++MK I +
Sbjct: 386 --KSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ ++ L KG +KDA + + + KG NV TYN +I CK L+EA
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503
Query: 303 EMLQRGISPTIRTYHAFL 320
+M G P T+ +
Sbjct: 504 KMEDNGCIPNAFTFETII 521
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 167/367 (45%), Gaps = 21/367 (5%)
Query: 67 EYHTMIAILG---KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
E T+ A+L KVRKF T W L DE P T + +R C + D RA
Sbjct: 189 EVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAV---VRSMCELKDFLRAK 245
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGW 182
+ F + I + L+ LC+ V +A E + ++ ++ G+
Sbjct: 246 EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGF 305
Query: 183 CNIIGSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + EA M EM + G + S ++ K + L ++ R G
Sbjct: 306 CRL--QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVP 363
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ VYNA+I++L KG + A L +M + PN +TY+ LI C++ +LD A F
Sbjct: 364 NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYF 423
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES-------MRKMGCQPTNDTYIMLIKK 354
D M+Q GI T+ Y++ ++ G+ FG L + M G +PT T+ LI
Sbjct: 424 DRMIQDGIGETVYAYNSLIN----GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + Q FK++N++ +NG P+ ++TALI L K+ EA + + E+ E+++ P
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 415 PKTDELL 421
T +L
Sbjct: 540 EVTYNVL 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 14/403 (3%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAIL 75
EM NK G++ ++ + ++S D + F L+ +G + + +I+ L
Sbjct: 460 EMTNK----GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGL 515
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K A L DE+ + P+ VT +LI YC + +A +
Sbjct: 516 CSTNKMAEASELFDELVERKIKPTEVTYN---VLIEGYCRDGKIDKAFELLEDMHQKGLV 572
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
++ L+S LC V A+ + +K N ++ +L+G+C G EA
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQE-GRLMEALS 631
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
EM QRGI D+V + +I K + L M G+ D +Y ++I +
Sbjct: 632 ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYS 691
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K K A M + PNVVTY +L+ LCKA ++D A F M + P
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY FLD + + G +E GL +M K G T+ ++I+ F + +F KV +E+
Sbjct: 752 TYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEM 810
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ENG PD +Y+ LI+ +G + + + + M + L P+
Sbjct: 811 TENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPD 853
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 163/357 (45%), Gaps = 10/357 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A Y T++ ++++F+ L+DEM P+ L+ +R+ + D
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDD- 348
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNI 177
A RF F + + L+++LC+ ++ AE L++ N + N +++I
Sbjct: 349 --AYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAE-LLYSNMSLMNLRPNGITYSI 405
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ +C G A + M Q GI V +++ +I+ K +L LF +M
Sbjct: 406 LIDSFCRS-GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + ++I K V+ A L M + G+ PNV T+ +LI LC K+ EA
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ FDE+++R I PT TY+ ++ R G ++ F LLE M + G P TY LI
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ +++ + + Y+AL+H G+L EA EM ++ +
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 186/443 (41%), Gaps = 48/443 (10%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDW--EAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
++ +++ E G + VS ++ +R + A+ + G+ G+ + Y+ +I
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGR-FGFVPNLFVYNALINS 374
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K D A L M P+ +T ILI +C + AI+ F +
Sbjct: 375 LCKGGDLDKAELLYSNMSLMNLRPNGITYS---ILIDSFCRSGRLDVAISYFDRMIQDGI 431
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ + L++ C++ ++ AE L NK V P T +F +++G+C + ++A
Sbjct: 432 GETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTAT-TFTSLISGYCKDL-QVQKA 489
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+++ +M GI +V +F+ +IS + + LFD++ I+ YN +I
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD---------- 302
+ + A L++ M +KG+ P+ TY LI LC ++ +A+ D
Sbjct: 550 YCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609
Query: 303 -------------------------EMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLE 334
EM+QRGI+ + + +D + F LL+
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G +P N Y +I +S+ F F+ W+ + P+ +YTAL++ L G
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729
Query: 395 KLEEAHQYYMEMKEKQLLPEPKT 417
+++ A + M+ + P T
Sbjct: 730 EMDRAGLLFKRMQAANVPPNSIT 752
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 169/428 (39%), Gaps = 71/428 (16%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V +VL +D + A FF + G HST Y M+ L R F A +L+ +
Sbjct: 72 VEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLL 131
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
E+ P V L +YKR KF+ + F L+
Sbjct: 132 RESHPKCVFSHFL--------------------DSYKRCKFSSTL-GFNLLVQNYVLSSR 170
Query: 154 VQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYD 207
+ DA LMF N ++ P ++ + +LNG + R+ VW E G+ D
Sbjct: 171 IFDAVVIVKLMFAN-NLLP-EVRTLSALLNGLLKV----RKFITVWELFDESVNAGVRPD 224
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ S ++ + ++ + M+ G + YN +IH L KG V +A+ + +
Sbjct: 225 PYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKR 284
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
S+ KG+A +VVTY +L+ C+ ++ + Q DEM++ G SPT +D +R
Sbjct: 285 SLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344
Query: 328 EV------------FG--------------------------LLESMRKMGCQPTNDTYI 349
++ FG L +M M +P TY
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI F R + ++ + ++G G +Y +LI+ G L A ++EM K
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464
Query: 410 QLLPEPKT 417
+ P T
Sbjct: 465 GVEPTATT 472
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI K F A+ D M E P++VT L+ C ++ RA F
Sbjct: 683 YTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM---NGLCKAGEMDRAGLLFK 739
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + L L + N+++A L NT + NII+ G+C + G
Sbjct: 740 RMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKL-G 798
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA +V EM++ GI D V++S +I Y ++ N+ ++L+D M G+E D YN
Sbjct: 799 RFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYN 858
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+I+ + A L M +G+ P+
Sbjct: 859 LLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
+ ++ FP N ++ ++NG C G A ++ M + + +++ C + +K
Sbjct: 705 LMVTEECFP-NVVTYTALMNGLCKA-GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
N+ + + L M + G+ + +N +I K +A ++ M E G+ P+ VT
Sbjct: 763 EGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVT 821
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMR 337
Y++LI C++ + + + +D ML RG+ P + Y+ + GE + F L + M
Sbjct: 822 YSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDML 881
Query: 338 KMGCQPTN 345
+ G P N
Sbjct: 882 RRGIIPDN 889
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 41/399 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y ++ L K + D A AL++ M P++VT +++ R
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR------- 156
Query: 120 GRAINAFYAYKRFKFAVG----IEDFQGLLSALCRYKNV-QDAEHLMFCNKDVFPFNTKS 174
R ++ + + A G I + L+ C+ ++V + E L + F + +
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++G C G R+A ++ EMS ++++ +I Y +A ++ + +RL +M
Sbjct: 217 YSTVIDGLCKA-GRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
D Y ++ A K + DA L + M ++P+VVT+ SL+ LC ++
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTY 348
++A + +E+ +RG PTI TY+ +D +R EE L+ R G P TY
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE---LVADFRSRGFVPNTVTY 389
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS---YTALIHALFLNGKLEEAHQYYME 405
+L+ R + + ++++ G GP +S Y ++ AL +G+ ++A Q+Y E
Sbjct: 390 NILVAGCCRAGRTDQALQYLDQLNSEG-GPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Query: 406 MKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
M ++ +P T F A KAHQPQ
Sbjct: 449 MIQRGYVPAAAT------------FATVVFALCKAHQPQ 475
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 170/395 (43%), Gaps = 20/395 (5%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S LV + R D A + + G A + Y+++I + R+ D A +++
Sbjct: 113 SALVDGLCKCERLDEAVALVETM---AERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
M P ++T L I +C DVGR + R F I + ++ LC+
Sbjct: 170 MVAEGCHPDIITYTAL---IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCK 226
Query: 151 YKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
++DA + M C +N+ ++ G+C G EA R+ +M D
Sbjct: 227 AGRLRDAVDIFEEMSCAPTAITYNS-----LIGGYCRA-GDMDEAIRLLGKMVDDKCAPD 280
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV+++ ++S + K L LF QM + D + +++ L ++DA+ L++
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG 326
+ +G P + TYN ++ CKA ++ +A + + RG P TY+ + R G
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 400
Query: 327 --EEVFGLLESMRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
++ L+ + G C + Y +++ R + + + + E+ + G P ++
Sbjct: 401 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 460
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++ AL + ++AH+ EM + P P T
Sbjct: 461 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGT 495
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 4/285 (1%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ L + + ++DA ++ + P NT + +++ C + +A + E
Sbjct: 42 YTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT-TLTVVVQSLC-LGDRVDDARELVEE 99
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG+ + +++S ++ K L + + L + M G YN++I + R
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +A M+ M +G P+++TY +LI CK+R + + E+ +RG +P I TY
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+D + + ++ +M C PT TY LI + R ++ ++ ++ P
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP 279
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT L+ A G+L++A++ + +M +L P+ T L D
Sbjct: 280 DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 14/351 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI +L K R F A L+DEMR +++Q +L L RRY A + F
Sbjct: 138 YASMIVLLAKHRHFGLARHLLDEMRERAVP---ISRQLILALTRRYVRAEMPSEAADLFR 194
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ ++ G D LL+AL + + +A+ L + VF + + +++ WC
Sbjct: 195 RME--EYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCR 252
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EAERV+ EM Q GI +V +++ +I +A + + L QM G +
Sbjct: 253 A-GRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTT 311
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--LDEARQAFD 302
+NA++ + K + + + M++ P+V+TYN LI+ C + LD A + D
Sbjct: 312 TFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLD 371
Query: 303 EMLQRGISPTIRTYHA---FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M + P T++ L ++ L E MR++ C+P TY L++ F++ +
Sbjct: 372 KMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEK 431
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
V ++ ++ G P+ +Y ALI A G + AH EM E++
Sbjct: 432 SMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEK 482
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D FN F ++L ++G+ A +++ +M + +VV+++C++ ++K +
Sbjct: 378 CVPDCHTFNPM-FRLLL-----VLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEK 431
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTY 281
++ VLR+ M GIE + Y A+I A +G + +L + +EEK P+
Sbjct: 432 SMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVR 491
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG 308
+ ++ L KA +L + + + M+ RG
Sbjct: 492 DMVLVLLRKAGQLKKHEELVELMVDRG 518
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 9/159 (5%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR------TGEEVFGLLE 334
Y S+I L K R AR DEM +R + P R L + R E L
Sbjct: 138 YASMIVLLAKHRHFGLARHLLDEMRERAV-PISRQL--ILALTRRYVRAEMPSEAADLFR 194
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M + G + + + ++ + + + PD YTA++HA G
Sbjct: 195 RMEEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAG 254
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+L+EA + + EM++ ++P T + D Y V R
Sbjct: 255 RLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPR 293
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 5/269 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + S++I+++G G +RE ++ M ++G D +++ I + K+ ++K
Sbjct: 578 FIPDVMSYSILIHGLVKA-GFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+L ++MK G + Y +VI LAK + +A L + + G+ NVV Y+SLI
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPT 344
K ++DEA +E++Q+G++P + T++ LD + EE+ L ++M+ + P
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPN 756
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY +LI R R+F F W E+ + G P+ +YT +I L G + EA +
Sbjct: 757 HITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFE 816
Query: 405 EMKEKQLLPEPKT-DELLQDWSYNKQFVE 432
K +P+ + + +++ SY+++ +E
Sbjct: 817 RFKANGGVPDSASYNAIIEGLSYSRRAME 845
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 172/371 (46%), Gaps = 13/371 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ GY S + T+I + + + D A +L+DEM+ +V + I +
Sbjct: 225 QELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYN---VCIDCFGKA 281
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
V A F+ K + ++ LC+ + +A + M N++V P
Sbjct: 282 GKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNV-PC-AY 339
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N ++ G+ + G EA + RG V++++CI++C K L + LR F++
Sbjct: 340 AYNTMIMGYGSA-GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK+ + YN +I L K V+ A + +M+E G+ PNV+T N +I LCKA+K
Sbjct: 399 MKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKK 457
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
LDEA F+ M + SP T+ + +D + + G ++ + L E M P Y
Sbjct: 458 LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS 517
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK F + + + K++ E+ G PD A + +F G+ + + E+K +
Sbjct: 518 LIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG 577
Query: 411 LLPEPKTDELL 421
+P+ + +L
Sbjct: 578 FIPDVMSYSIL 588
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 168/398 (42%), Gaps = 47/398 (11%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
++LV VL + D A ++F W +++ A Y +++ ++ K KFD ++ E
Sbjct: 95 TDLVIGVLRRAK-DVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGE 153
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
M GPS +T + LI + + + ++FKF + L+ AL
Sbjct: 154 MSIAGFGPS---TKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL-- 208
Query: 151 YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+VQ+++ ++ ++ +M + G V
Sbjct: 209 -SSVQESDIML--------------------------------TLFHQMQELGYEVSVHL 235
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F+ +I +++ L L L D+MK + D +YN I K V A ++
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIK 295
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---- 326
G+ P+ VTY S+I LCK +LDEA + F++M Q P Y+ I+ G
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM--IMGYGSAGK 353
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E + LLE + GC P+ Y ++ + + G + + E+ ++ P+ S+Y
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNV 412
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI L G++E A + MKE L P T ++ D
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMID 450
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 37/392 (9%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI-----------------LI 110
+ ++I LGK + D A+ L ++M + P+ V +L+ +I
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539
Query: 111 RRYCA---------------VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
R C+ + G+ F K F + + L+ L + +
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFAR 599
Query: 156 DAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+ L + K+ +T ++N ++G+C G +A ++ EM +G VV++ +
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKS-GKVNKAYQLLEEMKTKGRQPTVVTYGSV 658
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I +K L + LF++ K G+E + +Y+++I K + +A +M+ + +KG+
Sbjct: 659 IDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 718
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFG 331
PNV T+N L+ L KA +++EA F M +P TY ++ +R + F
Sbjct: 719 TPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFV 778
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ M+K G +P TY +I ++ ++ NG PD +SY A+I L
Sbjct: 779 FWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLS 838
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + EA++ + E + K KT L D
Sbjct: 839 YSRRAMEAYKIFEETRMKGCNIHTKTCIALLD 870
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 42/353 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+TMI G KFD A++L++ + PS++ +L + + GR A
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK------GRLGEALR 394
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
++ K KD P N ++N++++ C G
Sbjct: 395 TFEEMK-------------------------------KDAAP-NLSTYNVLIDMLCKA-G 421
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
A +V M + G+ +V++ + +I KA+ L + +F+ M D +
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++I L K V DA L + M + PN V Y SLIK K + ++ + F EM+ R
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541
Query: 308 GISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G SP +R +A++D + + GE G L E ++ G P +Y +LI +
Sbjct: 542 GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARET 601
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++ + E G D +Y I +GK+ +A+Q EMK K P T
Sbjct: 602 YELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 7/278 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+A K+ G T Y+T I K K + A+ L++EM+ P++VT ++ I
Sbjct: 604 LFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSV---ID 660
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
+ + A F K + + + L+ + + +A +M K + P
Sbjct: 661 GLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 720
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N ++N +L+ EA + M + +++S +I+ + R +K
Sbjct: 721 -NVYTWNCLLDALVKA-EEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFV 778
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ +M++ G++ + Y +I LAK + +A SL + + G P+ +YN++I+ L
Sbjct: 779 FWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLS 838
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
+R+ EA + F+E +G + +T A LD ++ E
Sbjct: 839 YSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDE 876
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 12/389 (3%)
Query: 30 SSELVSEVLSWV---RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWA 86
S+ LV +L + ++ A FF ++ S + S + + IL ++R FD AW
Sbjct: 50 STSLVENILGRLFASHSNGLKALEFFNYSLVHSHFPLSPASLNMTLHILTRMRYFDKAWV 109
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA---VGIEDFQG 143
L+ ++ T PSL+T +++ I++ + ++ F + F G ++F
Sbjct: 110 LLRDI--ARTHPSLLTLKSMSIVLSKIAKFQSFEDTLDGFRRMEDEVFVGREFGTDEFNV 167
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL A C + +++A + F NTKS NI+L G+ G+ E + EM +RG
Sbjct: 168 LLKAFCTQRQMKEARSVFAKLVPRFSPNTKSMNILLLGFKES-GNVTSVELFYHEMVRRG 226
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D V+F+ I Y K LRL ++M+R + + +IH R A
Sbjct: 227 FSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAW 286
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDI 322
L K + + + + YN+LI L + R ++ A DEM+++ I TYH FL
Sbjct: 287 QLFKEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHTMFLGF 346
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+R+ E V L + M + P T +ML+K F + + +W + E G P
Sbjct: 347 MRSRGIEGVSKLYQKMTQSNFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKGYCPHA 406
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ L+ L G + +A + +M E+
Sbjct: 407 HALDLLVTGLCARGLVHDAFECSKQMLER 435
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEK---GVAPNVVTYNSLIKPLCKARKLDEARQA 300
K + V+ +AK + +D + + ME++ G +N L+K C R++ EAR
Sbjct: 125 KSMSIVLSKIAKFQSFEDTLDGFRRMEDEVFVGREFGTDEFNVLLKAFCTQRQMKEARSV 184
Query: 301 FDEMLQRGISPTIRTYHAFLDIIR-----TGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F +++ R SP ++ + L + T E+F M + G P T+ + I +
Sbjct: 185 FAKLVPR-FSPNTKSMNILLLGFKESGNVTSVELF--YHEMVRRGFSPDGVTFNIRIDAY 241
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ FG+ ++ E+ P + T LIH L ++A Q + E+ + ++ +
Sbjct: 242 CKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAWQLFKEIPSRNMVAD 300
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 185/447 (41%), Gaps = 54/447 (12%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET-GPSLVTKQTLLILIRRYCAVHDVG 120
A + R Y+ ++ L K R A+ ++ EMR G++ P LVT T +I +C ++
Sbjct: 6 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYST---VINGFCKQGEMD 62
Query: 121 RAINAFY-AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
RA R A + + ++ LCR + A ++ K V P + +F+
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP-DKFTFSA 121
Query: 178 ILNGWCN-------------IIGSSREAERVWMEMSQRGICY------------------ 206
++ GWCN I+ SS + V G+C
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181
Query: 207 ------DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKGRL 258
DVV+++ +I + K+ NL K +++ M+ G +C V Y++++H L K
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME--GRKCVPNVVTYSSLLHGLCKAGD 239
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ L + M KG PNVVTY +LI LC A K+D AR DEM +Y+A
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV-FKVWNEISEN 374
LD R G EE L + M C P TY L++ F + F + N +
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
G PD +Y+ ++ + EA ++ EM + + P T L D V
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 435 IASLK-AHQPQSGQNTRVISKKSDQDR 460
+ LK +P T VI DR
Sbjct: 420 MEVLKNVDKPDVVTYTIVIEGLCGTDR 446
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 154/379 (40%), Gaps = 51/379 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ L K D A L M P++VT TL I CA H V A
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL---IHGLCAAHKVDAARLLMD 283
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ LL CR +++A+ L K P + ++ ++ G+CN
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP-DRITYTCLVRGFCN- 341
Query: 186 IGSSREAERVWME--MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
S E R +E + GI DVV++S +++ YS+A+ + +M + +
Sbjct: 342 -ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400
Query: 244 KVYNAVIHALAK-GRL------------------------------VKDAISLMKSMEEK 272
Y+++I L K GR+ ++A++L++ M K
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEV 329
V P+V T+NS+I LC+ +DEA + M G+ P + TY L+ RTG E
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Query: 330 FGLLESMRKMGCQPTNDTYIM-------LIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ L E MR+ + ++ ++ LI+ + R+ V E+ P
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580
Query: 383 YTALIHALFLNGKLEEAHQ 401
A++ L G+ EEA +
Sbjct: 581 CLAIVDGLLRAGRTEEAGK 599
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ-RGISPTIRTYHAFLDIIRTGEEVFGL 332
VAPN TYN ++ LCKAR +A + EM + ++P + TY ++ E+
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 333 LESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
E +R+M G P TY ++ R + ++ E+ G PD+ +++ALI
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 389 ALFLNGKLEEAHQYYMEM 406
K++EA + Y E+
Sbjct: 125 GWCNARKVDEALKLYKEI 142
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 202/452 (44%), Gaps = 51/452 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSEVL-SWVR-NDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
SEM+ K GI+ S ++ +L +++ W+ AFT F A +SG A+ ++T+++
Sbjct: 322 SEMKTK----GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA-LESGLAN-VFTFNTLLS 375
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
L K K + A L DE+ P++V+ +++ +C ++ A +
Sbjct: 376 WLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL---GHCRKDNINAACKVYKEMLDNG 432
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWC-------- 183
F F L+ + ++++A + KD + P +T + II+ G C
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT-TLGIIIKGLCKAGRSFEG 491
Query: 184 -------------------NII-------GSSREAERVWMEMSQRGICYDVVSFSCIISC 217
N I G+ A V+ EM + GI V+++ +I
Sbjct: 492 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 551
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K N+ L+L + MKR G++ D K Y +I K R +K A L+ + G++PN
Sbjct: 552 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 611
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLE 334
YNS+I ++EA + +M+ GI ++TY + +D ++++G ++ +
Sbjct: 612 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 671
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P + + +LI QF N K+ +++ P Y LI F G
Sbjct: 672 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
L+EA + + EM ++ L+P+ T ++L + +
Sbjct: 732 NLQEAFRLHDEMLDRGLVPDNITYDILVNGKF 763
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 175/440 (39%), Gaps = 81/440 (18%)
Query: 24 ECGIKVSSELV-SEVLSWVRN---DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+C ++S L S V++ + N D +A +F K+ +A T ++ IL
Sbjct: 70 KCDTSLNSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSA 129
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ A L D+ G++ +R C + + K + F + I+
Sbjct: 130 ETHRAQYLFDQFASGKS-------------VRFSCLMDRLVECT------KLYNFPLDIQ 170
Query: 140 DFQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ N+ +AE H + + ++++I ++ C + +S A + E
Sbjct: 171 E-----------GNILEAEQHFLQAKARGVELDQEAYSIFVHLLC-LKPNSGYALSLLRE 218
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G +F+ +I+ K N+ + LRL D M + C + + AV +L KG
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDM----VNCGKSMNLAVATSLMKGYC 274
Query: 259 ----VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
++ A+ L+ + E G+ PN VTY+ LI CK +++A + + EM +GI ++
Sbjct: 275 MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVY 334
Query: 315 TYHAFL-----------------DIIRTG--------------------EEVFGLLESMR 337
+ ++ L D + +G E L + +
Sbjct: 335 SLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G P +Y +I R KV+ E+ +NG P+ ++T L+ F G +E
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
A + MK+ +LP T
Sbjct: 455 NAFSIFHRMKDANILPTDTT 474
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 7/370 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + + +I K +K D A L D+M P+ VT ++I YC V
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN---VMIEGYCLVG 527
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP-FNTKSFN 176
++ +A + ++ L+S LC V A + ++ + N S
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L G+ G E +W EM+ RG+ D+VSF+ I+ K + K LF +MK
Sbjct: 588 ALLYGFFRE-GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I AL+K + A++ M G +PN VT+ LI LCK+ L
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT-GE-EVFGLLESMRKMGCQPTNDTYIMLIKK 354
A EML + P TY+ FLD T G+ E L S G + ++ +LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKG 766
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++I+E+G PD SY+ +IH L G + +A + + EM K L P+
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 415 PKTDELLQDW 424
+ W
Sbjct: 827 VVAYNIFIRW 836
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA + ++ G+ +V +++ +I K RLF +M G+E + Y +I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
HAL K +++DA+ L M +KG+ V YNSLI CK LD AR M++ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT +Y + + ++ +E R+M G N T+ LI F + ++ ++
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++ ++ P+ ++ +I L G + +A Q Y +M E L P+ T
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 13/310 (4%)
Query: 107 LILIRRYCAVHDV-GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CN 164
L+ IR++ D+ + + + + + GI A C +N+ A L+
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIR-------AYCESRNLDGARGLVVRME 225
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + +N+++ G C + +EA V M G+ D V++ ++ + + L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNM-RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LR+ M R+G + +I L K LV++A SL + + G+ PNV YN+L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
I LCK + D+A + F EM RG+ P TY + + + G E+ L + MR G
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ T Y LI + + + + + + G P +SY+ LI L NG L +
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464
Query: 402 YYMEMKEKQL 411
+ EM E+ +
Sbjct: 465 LHREMAERGI 474
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 65/391 (16%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ R H MI LG V +IDE+R E LV + L C + D+G
Sbjct: 287 ALRITHDMIR-LGFVPSEANCSFMIDELRKKE----LVEEAFSLA-----CKLGDLGMVP 336
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
N F + L+ LC+ + DA+ L + + P N ++ I+++
Sbjct: 337 NVF-------------AYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAILIHA 382
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G +A ++ +M +GI V ++ +I+ Y K +L + L M + G+
Sbjct: 383 LCKR-GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y+ +I L + + + L + M E+G+A N T+ +LI CK +K+DEA + F
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK----- 353
D+M+ + P T++ ++ ++ + F L + M +MG +P N TY LI
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561
Query: 354 ------------------------------KFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
F R +F + +W+E++ G D S+
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 621
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
T +++A E++ + EMKE+ + P+
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + NT + +++N C G AE + EM + + +++C + ++ ++
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L M + G +N +I L K +++AI LM + E G +P+ ++Y+++I
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQ 342
LCK +++A + ++EML +G+ P + Y+ F+ ++ ++ G+ +M + G Q
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 343 PTNDTYIMLIKKFS 356
P DTY L+ S
Sbjct: 860 PNWDTYRALLSGIS 873
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ LC+ + AE + C + +V P N ++N L+ + G +A+ + M
Sbjct: 694 LINNLCKSGYLGSAE--LLCKEMLAGNVLP-NKFTYNCFLDYFATE-GDMEKAKDLHSAM 749
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q G +VSF+ +I KA + + + L ++ G D Y+ +IH L K +
Sbjct: 750 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A L M KG+ P+VV YN I+ + D+A + M++ G+ P TY A
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 320 LDII 323
L I
Sbjct: 869 LSGI 872
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY+ +T + +I L K +A L EM G P+ T L + D+
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL---DYFATEGDM 739
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+A + A + A I F L+ LC+ +Q+A LM + F + S++ I
Sbjct: 740 EKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++ C + G +A +W EM +G+ DVV+++ I + K L ++ M R G
Sbjct: 799 IHELCKM-GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 239 IECDRKVYNAVIHALA 254
++ + Y A++ ++
Sbjct: 858 VQPNWDTYRALLSGIS 873
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 3/167 (1%)
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
G+ N T + ++ L K R+ AR FD+MLQ G+ Y A + R +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
GL+ M G + + Y +L+ + + +V N + G D +Y L++
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+LE A + +M +P + D K+ VE +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 33/395 (8%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
F W G+Q GY HS Y+ + L K A+ +M+ P T I++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYS---IVL 80
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDV 167
R C ++ +A + + + + ++ C+ V DA + M
Sbjct: 81 RGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGC 140
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHK 226
P + +FN +L G C+ G V E M++ G +V+S+S ++ KA L +
Sbjct: 141 VP-DVVTFNSLLKGLCS--GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY----- 281
RL+++M D Y + + L K V +A + M KG + V +
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 282 ------------NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII------ 323
N +I+ LC++ LDEA + F+EM+ R P+ ++ + +
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G +F ++SM++ C P +TY +++ + +Q ++ NE++ G PD +Y
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+AL+ L GKL+ A EM ++ + P+ TD
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 42/310 (13%)
Query: 139 EDFQGLLSALCRYKNVQDAEHL---MFCNKDVF-PFNTKSFNIILNGWCNIIGSSREAER 194
E F L+ A+C+ K + D L M K+ + P N +++NI+++ C EA+
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA-KQLDEAQE 360
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ EM+ G+ DVV++S ++ K L + L ++M + G+ D ++++AL+
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE------------------ 296
K V A+S +++M+ +G P++VTYN+L+ LCKA ++DE
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480
Query: 297 -----------------ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRK 338
A F EM++RG+ P YH+ LD + R G E LE ++
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA-LELLKT 539
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
C+P + M++ + + + +V +++ G D +Y ++ L GK+++
Sbjct: 540 SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDK 599
Query: 399 AHQYYMEMKE 408
A Q + E
Sbjct: 600 ARQLVDDASE 609
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 28/293 (9%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+P + +++I+L G C G +A+ + ++ + G+ +V+++S +I KA +
Sbjct: 69 YPPDDFTYSIVLRGLCKA-GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 228 LRLFDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L +F M G C D +N+++ L G + +A L + M + G PNV++Y++L+
Sbjct: 128 LEIFKTMSAGG-GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
LCKA +LDEA + ++EM+++ P + Y +F+ + V + RKM + +
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSK 246
Query: 346 DTYIM--------------------LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ +I+ R K + E+ + P +
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT 306
Query: 386 LIHALFLNGKLEEA---HQYYMEMKEKQLLPEPKTDELLQD-WSYNKQFVERQ 434
LIHA+ + +L + Q MKE P +T ++ D KQ E Q
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 18/250 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y ++ L K+ K D A L++EM P T ++L + + V
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK---AGKV 425
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTK 173
A++ K + + LL LC+ + +A + C DVF
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF----- 480
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S+ II+ C G + A ++ EM +RG+ D V + ++ ARN + L L +
Sbjct: 481 SYTIIITALCRS-GQAAGAHAIFQEMVKRGVLPDTVLYHSLLD--GLARNGLEDLAL-EL 536
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K + D ++ V+ L K +DA +++ M + G + TY ++++ L K K
Sbjct: 537 LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGK 596
Query: 294 LDEARQAFDE 303
+D+ARQ D+
Sbjct: 597 VDKARQLVDD 606
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 172/383 (44%), Gaps = 49/383 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ +++++ K+++FD +L ++M+ P L T I++ C RA
Sbjct: 81 SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN---IVMNCVCRSSQPCRAS 137
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+ F + F LL C + ++DA L +
Sbjct: 138 CFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALAL---------------------FD 176
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I+G G +VV+++ +I C K R+L+ + +F+QM GI +
Sbjct: 177 QIVG--------------MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNV 222
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN+++ L + DA L++ M ++G+ PNV+T+ +LI K K+ EA++ +
Sbjct: 223 VTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV 282
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFS 356
M+Q + P + TY A ++ G +G L+ R+M G P TY LI F
Sbjct: 283 MIQMSVYPDVFTYTALIN----GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFC 338
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ ++ + K++ E+S+ G + +YT LI L G+ + A + + +M ++ P+ +
Sbjct: 339 KSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398
Query: 417 TDELLQDWSYNKQFVERQIASLK 439
T +L D +VE+ + K
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFK 421
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 10/340 (2%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ + A AL D++ G P++VT TL I C + A+ F +
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTL---IHCLCKNRHLNHAVEIFNQMGDNGIRPNVV 223
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+S LC DA L+ + + P N +F +++ + + G EA+ ++
Sbjct: 224 TYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQP-NVITFTALIDAFVKV-GKIMEAKELYK 281
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M Q + DV +++ +I+ L + ++F M+ G + Y +IH K +
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+D + M +KG+ N +TY LI+ C + D A++ F++M R P IRTY+
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYN 401
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
LD + G E+ + + MRK TY ++I+ + + + F ++ +
Sbjct: 402 VLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK 461
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P+ +YT +I G + EA + +MKE LP
Sbjct: 462 GMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
RK+ +H L +A+ L M P++V + L+ + K ++ D F+
Sbjct: 51 RKILRNGLHNLQ----FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFE 106
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M GISP + T + ++ + R+ + L M K+G +P T+ L+ F W
Sbjct: 107 QMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN 166
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + ++++I G P+ +YT LIH L N L A + + +M + + P T
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVT 224
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 10/375 (2%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+W AF + + G + +T + +I+ L + A L EM+ + PS VT
Sbjct: 312 EWHKAFKVYNEMTAK-GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTY 370
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMF 162
++I +C ++ A + F ++ L+S LC V +A E +
Sbjct: 371 N---VMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDD 427
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+KD N ++ +++G+C G ++A M +RG+ D+V ++ +I ++
Sbjct: 428 LHKDHHKLNNMCYSALVHGYCKE-GRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + L +M G+ D +Y +I +K +K+A L M ++G PNVVTY
Sbjct: 487 DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYT 546
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKM 339
+LI LCKA +D+A E L ++P TY FLD + G E+ L +M K
Sbjct: 547 ALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK- 605
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G T +Y +LI+ F R + K+ + +++N PD +Y+ +I+ L+EA
Sbjct: 606 GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665
Query: 400 HQYYMEMKEKQLLPE 414
+ + M +K L P+
Sbjct: 666 IKLWHTMLDKGLKPD 680
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 18/342 (5%)
Query: 67 EYHTMIAILG---KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
E T+ A+L + R+F+ L D++ P + + +R C + D +A
Sbjct: 95 EVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAV---VRSLCELKDFNKAK 151
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWC 183
+ + + + I + L+ LC+ + + +A + K+ N++
Sbjct: 152 EMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI----KNCLMQKGLEANVV----- 202
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G EAE ++ EM ++G+C + +++S +I + + + + D+M + IE
Sbjct: 203 TYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTV 262
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++I+ K A M +KG+ P VVTY SLI C + +A + ++E
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNE 322
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +GISP T+ A + + R E L M++ P+ TY ++I+ R
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
F + +E+ G PD +Y LI L G++ EA ++
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEF 424
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 144 LLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+ + CR + +A L K F +N ++NG+C + G++ A+ + EM +
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL-GNASAAKYYFDEMIDK 291
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ VV+++ +IS Y HK +++++M GI + + A+I L + ++ +A
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEA 351
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD- 321
I L M+E+ + P+ VTYN +I+ C++ + EA DEM+ +G P TY +
Sbjct: 352 IRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISG 411
Query: 322 IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G E ++ + K + N Y L+ + + +F + + E G D
Sbjct: 412 LCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMD 471
Query: 380 RSSYTALI---------HALFLNGKLEEAHQY 402
Y LI ALF G L+E H +
Sbjct: 472 LVCYAILIDGTAREHDTRALF--GLLKEMHNH 501
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 10/343 (2%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
KF+ A L EM GE G T ILI +C ++ AI + +
Sbjct: 207 KFNEAELLFKEM--GEKGLC-ANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVY 263
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L++ C+ N A++ +K + P ++ +++G+CN G +A +V+
Sbjct: 264 PYNSLINGYCKLGNASAAKYYFDEMIDKGLTP-TVVTYTSLISGYCNE-GEWHKAFKVYN 321
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM+ +GI + +F+ IIS +A + + +RLF +MK I YN +I +
Sbjct: 322 EMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSG 381
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ +A L+ M KG P+ TY LI LC ++ EA++ D++ + Y
Sbjct: 382 NISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYS 441
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + + G ++ M + G Y +LI +R +F + E+ +
Sbjct: 442 ALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH 501
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD YT +I G L+EA + M ++ LP T
Sbjct: 502 GLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVT 544
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 22/288 (7%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWCNIIGSSREAE 193
+ LL+ L R++ D L+F D+ N + ++ ++ C + ++ E
Sbjct: 96 VRTLSALLNGLLRFRRFNDVL-LLF--DDIVSANVQPDIYIYSAVVRSLCELKDFNKAKE 152
Query: 194 RV-WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ WME +Q + +V ++ +I K+R + + L + + + + G+E + Y
Sbjct: 153 MIHWMEFNQCKL--SIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY------ 204
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
G+ +A L K M EKG+ N +TY+ LI C+ ++D A D+M + I T
Sbjct: 205 --YGKF-NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFT 261
Query: 313 IRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ Y++ ++ + G + M G PT TY LI + ++ FKV+N
Sbjct: 262 VYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYN 321
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E++ G P+ ++TA+I L + EA + + EMKE++++P T
Sbjct: 322 EMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVT 369
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ ++NG C G +AE + E + + +++ C + ++ N+ K ++L
Sbjct: 541 NVVTYTALINGLCKA-GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL 599
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M + G YN +I + +++A L+ M + + P+ +TY+++I CK
Sbjct: 600 HHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCK 658
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTY 316
L EA + + ML +G+ P Y
Sbjct: 659 RSNLQEAIKLWHTMLDKGLKPDTLAY 684
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
L L R N++ A L F T S+NI++ G+C + G EA ++ M+
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRL-GKIEEATKLLHGMTDND 641
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
I D +++S II ++Q KR ++ +AI
Sbjct: 642 ILPDYITYSTII---------------YEQCKRSNLQ--------------------EAI 666
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
L +M +KG+ P+ + Y+ L+ C A +L++A + DEM++RG+
Sbjct: 667 KLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 100/260 (38%), Gaps = 46/260 (17%)
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP------ 287
MK + + + +A+++ L + R D + L + V P++ Y+++++
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 288 -----------------------------LCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
LCK+R++ EA + + ++Q+G+ + TY+
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ E L + M + G + TY +LI F R + N +++++
Sbjct: 207 KFN------EAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEF 260
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL-----QDWSYNKQFVER 433
Y +LI+ G A Y+ EM +K L P T L + ++K F
Sbjct: 261 TVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320
Query: 434 QIASLKAHQPQSGQNTRVIS 453
+ K P + T +IS
Sbjct: 321 NEMTAKGISPNTYTFTAIIS 340
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 32/361 (8%)
Query: 7 ILREF--SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS 64
ILR F H E + G ++ + ++VL + N + A FF W +Q G+ H
Sbjct: 303 ILRRFKWGHAAEE---ALHNFGFRMDAYQANQVLKQMDN-YANALGFFYWLKRQPGFKHD 358
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
Y TM+ LG+ ++F L+DEM P+ VT L I Y + + A+N
Sbjct: 359 GHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL---IHSYGRANYLKEAMN 415
Query: 125 AFYAYKR---------FKFAVGIEDFQGLLS-ALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
F + + + I G L A+ Y+ +Q+A + D F +
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG----LSPDTF-----T 466
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+++I+N G A R++ EM +G ++V+F+ +I+ ++KARN L+L+ M
Sbjct: 467 YSVIIN-CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + D+ Y+ V+ L +++A + M+ K P+ Y L+ KA +
Sbjct: 526 QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV 585
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIML 351
D+A Q + MLQ G+ P + T ++ L + E + LL+SM +G P+ TY +L
Sbjct: 586 DKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Query: 352 I 352
+
Sbjct: 646 L 646
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q G +D +++ ++ +A+ ++ +L D+M R G + + YN +IH+ + +K
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A+++ M+E G P+ VTY +LI KA LD A + M + G+SP TY +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 321 DIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + + L M GC P T+ ++I ++ R + K++ ++ G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD+ +Y+ ++ L G LEEA + EM+ K +P+ LL D
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E ++ EM + G + V+++ +I Y +A L + + +F+QM+ G E DR Y +I
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AK + A+ + + M+E G++P+ TY+ +I L KA L A + F EM+ +G +
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 311 PTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + T++ + + R E L M+ G QP TY ++++ V
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE-PKTDELLQDW 424
+ E+ PD Y L+ G +++A Q+Y M + L P P + LL +
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 16/362 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K A ++D E P ++T ILI C VG+A+
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYT---ILIEATCNDSGVGQAMKLLD 267
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILNGW 182
++ + + L++ +C+ + +A + F N P N + NIIL
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEA--IKFLNN--MPSYGCKPNVITHNIILRSM 323
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +AER+ +M ++G VV+F+ +I+ + R L + + + ++M + G +
Sbjct: 324 CST-GRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN ++H + + + AI ++ M +G P++VTYN+L+ LCK K+D A + +
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G SP + TY+ +D + + G+ + LLE MR+ G +P TY L++ R
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG 502
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ K+++++ P +Y A++ L + A + M EK P T
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562
Query: 420 LL 421
+L
Sbjct: 563 IL 564
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L+ CR + A +M N P + ++N+++ G+C S E ++ + +
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVP-DVITYNVLIGGYCK----SGEIDKALEVLER 201
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFD-QMKRMGIEC--DRKVYNAVIHALAKGRL 258
+ DVV+++ I+ + L + + + D Q++R EC D Y +I A
Sbjct: 202 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR---ECYPDVITYTILIEATCNDSG 258
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ L+ M +KG P+VVTYN LI +CK +LDEA + + M G P + T++
Sbjct: 259 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNI 318
Query: 319 FL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + TG + LL M + GC P+ T+ +LI R R G V ++ ++G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P+ SY L+H K++ A +Y M + P+
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 417
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 7/263 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E + M +G DV++ + +I + ++ K R+ + ++ G D Y
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I K + A+ +++ M VAP+VVTYN++++ LC + KL EA + D LQ
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R P + TY ++ V LL+ MRK GC+P TY +LI + +
Sbjct: 237 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K N + G P+ ++ ++ ++ G+ +A + +M K P T +L +
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 424 WSYNKQFVERQIASLKAHQPQSG 446
+ K+ + R I L+ P+ G
Sbjct: 357 FLCRKRLLGRAIDVLE-KMPKHG 378
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
D L D +R G PS+VT ILI C +GRAI+ +
Sbjct: 330 MDAERLLSDMLRKG-CSPSVVTFN---ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385
Query: 141 FQGLLSALCRYKNVQDA-EHL-MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ LL C+ K + A E+L + ++ +P + ++N +L C G A + +
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-DIVTYNTLLTALCKD-GKVDAAVEILNQ 443
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+S +G +++++ +I +K + L ++M+R G++ D Y+ ++ L +
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +AI + ME + P+ VTYN+++ LCKA++ A M+++G PT TY
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563
Query: 319 FLDII 323
++ I
Sbjct: 564 LIEGI 568
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 171/380 (45%), Gaps = 55/380 (14%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V I
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S++I+L C+ G S +A+
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYSILLKSLCDQ-GKSGQADD 203
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C DVV+++ +I + K +++K LF +M + GI D Y++V+HA
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPN----------------------------------- 277
L K R + A + ++ M KGV PN
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLE 334
VVT+N L+ LCK K+ EAR FD M +G +P + +Y+ L+ T ++ L +
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P T+ +LIK ++ ++NE+ ++G P+ +YT +I AL G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
K+++A + + +M ++ + P+
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 78/395 (19%)
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G P +V T+ I + DV +A + F + + ++ ALC+ +
Sbjct: 212 GAVCSPDVVAYNTV---IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 153 NVQDAEHLM--FCNKDVFPFN----------------------------------TKSFN 176
+ AE + NK V P N +FN
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G +EA V+ M+ +G DV S++ +++ Y+ L + LFD M
Sbjct: 329 MLMGSLCKY-GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
GI +N +I A A ++ A+ + M + GV PNV+TY ++I LC+ K+D+
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447
Query: 297 ARQAFDEMLQRGISPTIRTYHAF--------------------------LDIIRTGEEVF 330
A + F++M+ +G++P YH LDI+ +
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507
Query: 331 GLLESMRKM------------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
L + R M G PT Y ML+ + + +V++ + G P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ Y L++ G+++E + EM +K + P
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 148/332 (44%), Gaps = 10/332 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P + T +LI+ Y + +A+ F + + + +++
Sbjct: 381 LFDLMLGDGIAPVICTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + +++ ++ G+C GS +A+ + E+ G+
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTH-GSLLKAKELISEIMNNGM 495
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V FS II+ K + +FD +G+ VY+ ++ ++ A+
Sbjct: 496 HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PN V Y +L+ CK ++DE F EMLQ+GI P+ Y+ +D +
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G V ++ M + G TY ++++ + R F ++ E+ D
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +I +F ++EEA + + L+P
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 45/327 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y T+IA L ++ K D A ++M P K LI+ +C
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYHCLIQGFCTH 477
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ +A + I F +++ LC+ V DA+++ + N + P
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-TAVV 536
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++++++G+C ++G +A RV+ M GI + V + +++ Y K + + L LF +M
Sbjct: 537 YSMLMDGYC-LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 235 KRMGIECDRKVYNAVI-----------------------------------HALAKGRLV 259
+ GI+ +YN +I L K R
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 655
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+AI L K + V +++T N++I + + R+++EA+ F + + G+ P + TY
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715
Query: 320 L-DIIRTG--EEVFGLLESMRKMGCQP 343
+ ++I+ G EE + SM+ GC+P
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEP 742
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 11/252 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ D + N ++ + + +A+ L+
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-IIRT 325
E G P+V +Y+ L+K LC K +A M + G SP + Y+ +D +
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R ++ G P+ +Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLKAH 441
LI+ G+ +EA + + EM+ + +LP+ T +L Y K R + A
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM 352
Query: 442 QPQSGQNTRVIS 453
+ GQN V S
Sbjct: 353 K---GQNPDVFS 361
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM-- 161
+L+ YC V + +A+ F A + GIE + L++ C+ + + L
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAM----VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
K + P +T +NII++G G + A+ + EM++ GI + ++S ++ K
Sbjct: 595 MLQKGIKP-STILYNIIIDGLFEA-GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 652
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
R + + LF +++ M ++ D N +I + + R V++A L S+ G+ P VVTY
Sbjct: 653 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTY 712
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-HAFLDIIRTGEEV 329
+ +I L K ++EA F M G P R H ++++ E V
Sbjct: 713 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 169/342 (49%), Gaps = 27/342 (7%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
PSL++ +LL + + V + + A+K + + ++SA C+ NV+DA
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLP---DVYTYTNMISAHCKVGNVKDA 243
Query: 158 EHLMF-------------------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ +K + P + +++I++NG+C + SREA+ + +E
Sbjct: 244 KRVLLEMGEKARLLDEAIELKRSMVDKGLVP-DLYTYDILINGFC-MEKRSREAKLMLLE 301
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ + ++++ +I + + ++ + R+ D+M GIE + ++N +++ + K
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++ A+ +M+ M EKGV P+ TY+ LI+ C+ + + A + DEM +R ++PT+ TY
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + R G + +L M G +P Y L+ ++ + + + E G
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 481
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD Y +LI ++EEA Y MEM E++L P T
Sbjct: 482 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 11/292 (3%)
Query: 135 AVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGS 188
A GIE + LL+ +C+ ++ A +M K V P +++++++++ G C
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP-DSQTYSLLIEGHCRGQNM 397
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+R E + EM +R + V+++S II+ + NL + +M G++ + VY
Sbjct: 398 ARAFE-LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++ A AK V+++ +++ M E+G+ P+V YNSLI CKA++++EAR EML+R
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 309 ISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ P TY AF+D + GE M G P Y LI+ + F
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
V+ I D +Y+ LIH L NGK+ EA + E++EK LLP T
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
V P N + ++ G C G+ EA V+ + R + DV ++S +I S+ +H+
Sbjct: 552 VLP-NVGIYTALIEGHCKE-GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHE 609
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +++ G+ + YN++I K V A L++ M KG+ P++VTYN LI
Sbjct: 610 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 669
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LCKA +++ A+ FD++ RG++P TY A +D + F LLE M G P
Sbjct: 670 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
Y +++ + +F ++ E+ E G S+ LI +GKL+EA+
Sbjct: 730 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLL 788
Query: 404 MEMKEKQLLPEPKTDELLQD 423
EM EKQ +P T L D
Sbjct: 789 EEMIEKQFIPNHVTYTSLID 808
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 8/264 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+S C+ NV A L+ C K + P + ++NI+++G C G A+ ++ +
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINP-DIVTYNILIDGLCKA-GEIERAKNLFDD 686
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ RG+ + V+++ ++ Y K++N +L ++M G+ D +YN +++ K
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ L + M EKG A + V++N+LI+ CK+ KL EA +EM+++ P TY +
Sbjct: 747 FEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + G E L M++ PT TY L+ + V ++ E+ G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865
Query: 376 NGPDRSSYTALIHALFLNGKLEEA 399
PD+ +Y +I A G + EA
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEA 889
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 6/319 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
LI +C +V A + F + ++ + L+ L R + +A + K
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P N ++N +++G C G+ +A ++ EM +GI D+V+++ +I KA + +
Sbjct: 622 LLP-NAFTYNSLISGSCKQ-GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 679
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
LFD ++ G+ + Y A++ K + A L++ M +GV P+ YN ++
Sbjct: 680 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 739
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPT 344
CK K ++A F EML++G + T+ ++G +E LLE M + P
Sbjct: 740 FCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 799
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY LI + G ++W E+ E P +YT+L+H G + E +
Sbjct: 800 HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 859
Query: 405 EMKEKQLLPEPKTDELLQD 423
EM K + P+ T ++ D
Sbjct: 860 EMVAKGIEPDKMTYYVMID 878
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 14/383 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ A + Y +I L + A++ EM P+ V TL+ A
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT------AH 461
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAE-HLMFCNKDVFPFNT 172
GR + +R + + D + L+ C+ K +++A +LM + N
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ ++G+ G A+R + EM G+ +V ++ +I + K N+ + +F
Sbjct: 522 HTYGAFIDGYSKA-GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+ + D + Y+ +IH L++ + +A + ++EKG+ PN TYNSLI CK
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+D+A Q +EM +GI+P I TY+ +D + + G E L + + G P TY
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++ + + + F++ E+ G PD Y +++ K E+A + EM EK
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 760
Query: 410 QLLPEPKTDELLQDWSYNKQFVE 432
+ L++ + + + E
Sbjct: 761 GFASTVSFNTLIEGYCKSGKLQE 783
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 8/267 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+++I+ K D A L++EM P +VT ILI C
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN---ILIDGLCKA 674
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ RA N F + + ++ C+ KN A L+ + V P +
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP-DAFI 733
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N+ILN +C +A ++ EM ++G VSF+ +I Y K+ L + L ++M
Sbjct: 734 YNVILN-FCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM 791
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ Y ++I K ++ +A L M+E+ V P TY SL+ +
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 851
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD 321
E F+EM+ +GI P TY+ +D
Sbjct: 852 SEVSALFEEMVAKGIEPDKMTYYVMID 878
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V F ++ Y K L + + +F K N+++ L KG V+ +
Sbjct: 155 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 214
Query: 269 MEEKGVAPNVVTYNSLIKPLCK-----------------ARKLDEARQAFDEMLQRGISP 311
M V P+V TY ++I CK AR LDEA + M+ +G+ P
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVP 274
Query: 312 TIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+ TY ++ R+ E LLE M +G +P TY LI F R F++
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLE-MIDVGLKPEPITYNALIDGFMRQGDIEQAFRI 333
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+E+ G + + L++ + GK+E+A + EM EK + P+ +T LL
Sbjct: 334 KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES 335
P++++ NSL+ L K K++ + FD M + P + TY +
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTY-----------------TN 229
Query: 336 MRKMGCQPTN--DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M C+ N D +L++ + R ++ + + G PD +Y LI+ +
Sbjct: 230 MISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 289
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ EA +EM + L PEP T L D
Sbjct: 290 KRSREAKLMLLEMIDVGLKPEPITYNALID 319
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 181/396 (45%), Gaps = 17/396 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV EVL + + FF WAGK+ + H + Y +I L +
Sbjct: 82 LEVLKLKVDHRLVREVLK-IDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGML 140
Query: 82 DTAWALIDEMRGGE--TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
W I EM GP+ +++ +++ V +A++ FY K K
Sbjct: 141 GEMWKTIQEMVRSTCVIGPADLSE-----IVKVLGKAKMVNKALSIFYQIKGRKCKPTSN 195
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNK-DVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ ++ L + + + L CN+ D P +T +++ ++ + + G A ++
Sbjct: 196 TYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP-DTVTYSALIAAFGKL-GRDDSAISLF 253
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + G+ ++ I+ Y K + K L L +MK G Y +I + K
Sbjct: 254 DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA 313
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
V++A S+ +M ++G P+VV N+LI L KA +L +A + F+EM +P + TY
Sbjct: 314 GKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY 373
Query: 317 H----AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ A + E F E M++ G P++ TY +LI F + + + E+
Sbjct: 374 NTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMD 433
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
E G P ++Y +LI+AL + E A++ + E++E
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE 469
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 162/364 (44%), Gaps = 27/364 (7%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +IA GK+ + D+A +L DEM+ P+ T+L + Y + V +A+
Sbjct: 230 TVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI---YFKLGRVEKALG 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII 178
K A+ + + L+ + + V++A + C DV ++
Sbjct: 287 LVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDV---------VL 337
Query: 179 LNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQ 233
+N N++G + +A +++ EM +VV+++ +I SKAR L +++
Sbjct: 338 INNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEK 396
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G+ Y+ +I K V+ A+ L++ M+EKG AP Y SLI L KA++
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ A + F E+ + + R Y + + + G E L M+K+GC P Y
Sbjct: 457 YEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ R + + ENG PD +S+ +++ G + A + + MK +
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 411 LLPE 414
+ P+
Sbjct: 577 IKPD 580
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + S I+ KA+ ++K L +F Q+K + YN++I L +
Sbjct: 149 EMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 258 LVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ L M +G P+ VTY++LI K + D A FDEM + G+ PT + Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 317 HAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
L I + G E+ GL++ M++ GC T TY LIK + + + ++ + +
Sbjct: 269 TTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLK 328
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD LI+ L G+L +A + + EM+ Q P
Sbjct: 329 EGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP 368
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 56/322 (17%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A++ F+ K+ G + +I +LGK + A L +EM + P++VT T
Sbjct: 317 EEAYSIFMNMLKE-GCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNT 375
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMF 162
++ + RA AF Y++ K + + L+ C+ V+ A L+
Sbjct: 376 VIKAL-----FESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIIS 216
+ K F +C++I + +A+R ++ E+ + ++ +I
Sbjct: 431 ------EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIK 484
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--- 273
K L + + LF++MK++G D YNA++ + + + +A SL+++MEE G
Sbjct: 485 HLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTP 544
Query: 274 --------------------------------VAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ P+VV+YN+++ L +A +EA +
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Query: 302 DEMLQRGISPTIRTYHAFLDII 323
EM +G + TY + L+ +
Sbjct: 605 KEMNSKGFEYDLITYSSILEAV 626
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 52 FLW--AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
FLW K++G S+ Y +I K + + A L++EM P +L+
Sbjct: 391 FLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA 450
Query: 110 I---RRYCAVHDVGRAI--NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
+ +RY A +++ + + N Y+ R +AV I+ G L ++ + + CN
Sbjct: 451 LGKAKRYEAANELFQELRENCGYSSARV-YAVMIKHL-GKCGRLSEAVDLFNEMKKLGCN 508
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
DV+ ++N +++G + G + EA + M + G D+ S + I++ +++
Sbjct: 509 PDVY-----AYNALMSGMVRV-GMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +F +MK I+ D YN V+ L++ + ++A LMK M KG +++TY+S+
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622
Query: 285 IKPLCK 290
++ + K
Sbjct: 623 LEAVGK 628
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 29/368 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV + A L+ + G + V T+ I C V
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTV---IYGMCKDKHV 211
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SF 175
A + + + + + L+S ++DA L NK + N K +F
Sbjct: 212 NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF--NKIILE-NIKPDGYTF 268
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+++G+C +E + V+ M ++GI DVV+++ ++ Y + ++ +F+ M
Sbjct: 269 NILVDGFCKD-RKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMA 327
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ D + YN +I+ K + V A++L M K + PNVVTYNSLI L K+ ++
Sbjct: 328 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 387
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLI 352
A Q D+M RG+ P I TY++ +D + +V L+ + G QP+ TY +LI
Sbjct: 388 YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 447
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + +I+ N +Y +IH G +EA +MK+ +
Sbjct: 448 DGLCKVEGY--------DITVN-------TYNVMIHGFCKKGLFDEALSLLSKMKDSSCI 492
Query: 413 PEPKTDEL 420
P T E+
Sbjct: 493 PNAVTYEI 500
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 176 NIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
NI++ +C + + + ++ ++ G D VS+ +I K L L
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++ ++ + +YN VI+ + K + V DA L M KG++PNVVTY++LI
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTND 346
KL +A F++++ I P T++ +D ++ G+ VF + M K G P
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAM---MMKQGIIPDVV 301
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY L+ + ++ ++N +++ G PD SY LI+ K+++A + EM
Sbjct: 302 TYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 361
Query: 407 KEKQLLPEPKTDELLQD-------WSYNKQFVER 433
K ++P T L D SY Q V++
Sbjct: 362 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQ 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 36/319 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSE--VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
SEM +K + S L+S V+ +++ + L K GY ++ ++
Sbjct: 219 SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYT-----FNILVD 273
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
K RK + M P +VT +L+ YC V +V A + F +
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM---DGYCLVKEVNTAKSIFNTMAQGG 330
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
I + L++ C+ K V A +L M C K++ P N ++N +++G G
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC-KNIIP-NVVTYNSLIDGLSKS-GRIS 387
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR------- 243
A ++ +M RG+ ++++++ II K + K + L + K GI+
Sbjct: 388 YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 447
Query: 244 -------------KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
YN +IH K L +A+SL+ M++ PN VTY I+ L
Sbjct: 448 DGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLD 507
Query: 291 ARKLDEARQAFDEMLQRGI 309
+ D+A + F EM+ RG+
Sbjct: 508 NNENDKAEKLFREMITRGL 526
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+ +S+S + + ++ + LF+++ R +N ++ +L K + +SL
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLD-EARQAF---DEMLQRGISPTIRTYHAFL-D 321
+ ME +G+ PN+ N LI C+ + + QAF D+++ G +Y +
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 322 IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ + GE LL+ + Q Y +I + + + F +++E+ G P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y+ALI F+ GKL++A + ++ + + P+ T +L D
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 176/386 (45%), Gaps = 31/386 (8%)
Query: 45 WEAAFTFF---LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPS 99
WE A F L G Q S+ +I +L K K A L++ + RG
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSS----VLIDMLCKKGKVIEANKLLEVVIQRG-----C 559
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
++ T L++ C H + +A F ++ + L+ LC+ N++ A
Sbjct: 560 ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 619
Query: 160 L---MFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
L M + + N K S++II++G C G EA ++ EM G+ DV+S++
Sbjct: 620 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC-GREDEARELFKEMKALGVIPDVISYT 678
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I + ++ LF++M +G++ D ++ +I L K V +A L++ M ++
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGL 332
G PN VTY +L+K LC ++ EA Q F +M + G P + TY + + +
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798
Query: 333 LESMRKM---------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
LE +KM +P +Y ++I + + +++ E+ G P+ SY
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 858
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEK 409
T+LIH +GKLE+A + EM ++
Sbjct: 859 TSLIHGFCRSGKLEDAKHLFNEMVDQ 884
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 166/370 (44%), Gaps = 20/370 (5%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I IL K K A L++ M +VT TL I+ C H + A F + +
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL---IKGLCMEHRISEATWLFMSMQ 409
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK----SFNIILNGWC 183
+ + L+ LC+ N+ A L M + + K S++II++G C
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
EA ++ EM +GI DV+S++ +I + + K LF++M +GI+ D
Sbjct: 470 KD-RREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ +I L K V +A L++ + ++G +VVT +L+K LC ++ +A Q F +
Sbjct: 529 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLK 588
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---------GCQPTNDTYIMLIKK 354
M + G P + T + + + LE + M C+P +Y ++I
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + +++ E+ G PD SYT+LIH +GK ++A + EM + + P+
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708
Query: 415 PKTDELLQDW 424
T +L D
Sbjct: 709 VTTFSVLIDM 718
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 9/240 (3%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA ++ + QRG DVV+ + ++ + K +LF +M+++G +
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEK------GVAPNVVTYNSLIKPLCKARKLDEARQA 300
++ L + +K A+ L K+M PN ++Y+ +I LCK + DEAR+
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F EM G+ P + +Y + + R+G+ + L M +G QP T+ +LI +
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++ + + G P+ +YT L+ L +N ++ EA Q +M+M++ LP+ T
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 166/430 (38%), Gaps = 55/430 (12%)
Query: 17 EMRNKIEECGIKVSSELVS-----EVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
EM N GIK L+S + L R + EA F K G Y ++
Sbjct: 149 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF--KEMKAQGMMPDVISYTSL 206
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I K++ A L +EM P + T +LI +C V A
Sbjct: 207 IHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG---VLIDMFCKEGKVIEANELLEVMVH 263
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNI 185
+ I + L+ LC + +A L C D + T ++ G C
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT-----LMKGLCQT 318
Query: 186 IGSSREAERVWMEM----SQRGI-CY--DVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G A + EM SQ GI C DV + S +I K + + L + M + G
Sbjct: 319 -GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D Y+ +I L + +A L SM++ G P+ +TY +L+K LC+ ++ A
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 437
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
Q EML D R G + C+PT +Y ++I +
Sbjct: 438 QLHQEMLN--------------DTGRYG------------IKCKPTLISYSIIIDGLCKD 471
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
R+ +++ E+ G PD SYT LIH L+GK E+A + EM + + P+ T
Sbjct: 472 RREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 531
Query: 419 ELLQDWSYNK 428
+L D K
Sbjct: 532 SVLIDMLCKK 541
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 157/364 (43%), Gaps = 21/364 (5%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I IL K K A L++ M +VT TL I+ C H + A F + +
Sbjct: 60 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL---IKGLCMEHRISEATWLFMSMQ 116
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK----SFNIILNGWC 183
+ + L+ LC+ N+ A L M + + K S++II++G C
Sbjct: 117 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 176
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
EA ++ EM +G+ DV+S++ +I + + K LF++M +GI+ D
Sbjct: 177 KD-RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDV 235
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+I K V +A L++ M +G ++VTY++LIK LC ++ EA Q F
Sbjct: 236 TTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMS 295
Query: 304 MLQRGISPTIRTYHAFL-DIIRTGEEVFGL------LESMRKMGCQ---PTNDTYIMLIK 353
M + G P Y + + +TG+ L L + G + P T MLI
Sbjct: 296 MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLID 355
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ++ + + G D +Y+ LI L + ++ EA +M M++ P
Sbjct: 356 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 415
Query: 414 EPKT 417
+ T
Sbjct: 416 DAIT 419
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC---------IISC 217
+FP ++ +FNI++N CN+ E + +RG D+V++S +I
Sbjct: 6 LFP-DSFTFNILINCLCNV-KRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDI 63
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
K + + L + M + G D Y+ +I L + +A L SM++ G P+
Sbjct: 64 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 123
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMR 337
+TY +L+K LC+ ++ A Q EML D R G
Sbjct: 124 AITYGTLMKGLCQTGNINIALQLHQEMLN--------------DTGRYG----------- 158
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ C+PT +Y ++I + R+ +++ E+ G PD SYT+LIH +GK E
Sbjct: 159 -IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDW 424
+A + EM + + P+ T +L D
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 21/265 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K + D A L EM+ P +++ +L I +C G+ +A Y
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL---IHGFCRS---GKWKDAKY 695
Query: 128 AYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
+ +G++ F L+ LC+ V +A L+ + P NT ++ ++ G
Sbjct: 696 LFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-NTVTYTTLVKG 753
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR----- 236
C + EA +++M+M + G DVV++ ++ + N+ L L +M
Sbjct: 754 LC-MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Query: 237 -MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ D Y+ +I L K +A L K M+ GV PNV++Y SLI C++ KL+
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL 320
+A+ F+EM+ +G+ TY +
Sbjct: 873 DAKHLFNEMVDQGVQLNAVTYSVMI 897
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + +I +L K K A L++ M P+ VT TL ++ C +
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL---VKGLCMNDRI 760
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK--- 173
A F ++ + + L+ LC+ N++ A L M + + N K
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820
Query: 174 -SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
S++II++G C G EA ++ EM G+ +V+S++ +I + ++ L LF+
Sbjct: 821 ISYSIIIDGLCKH-GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879
Query: 233 QMKRMGIECDRKVYNAVIHALAK 255
+M G++ + Y+ +IH K
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCK 902
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 181/403 (44%), Gaps = 31/403 (7%)
Query: 35 SEVLSWVRNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRK--FDTAWALIDEM 91
+ +LSW+ + + + LW G A + Y++MI LG R+ D A ++ +M
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMI--LGHCRQGNLDMAASVFSDM 514
Query: 92 RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF--------KFAVGIEDFQG 143
P+++T IL+ Y D A FY + R F I+
Sbjct: 515 LDCGLKPNVITYS---ILMDGYFKNGDTEYA---FYVFDRMVDENIVPSDFTYNIK---- 564
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ LC+ +A+ ++ F K P ++N I++G+ GS A + EM +
Sbjct: 565 -INGLCKVGRTSEAQDMLKKFVEKGFVPV-CLTYNSIMDGFIKE-GSVSSALTAYREMCE 621
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G+ +V++++ +I+ + K N L++ ++M+ G+E D Y A+I K + ++
Sbjct: 622 SGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIET 681
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L + + G++PN V YNSLI ++ A ML GIS ++TY +D
Sbjct: 682 ASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLID 741
Query: 322 -IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+++ G V L M G P Y +LI Q N K+ E+ + P
Sbjct: 742 GLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITP 801
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ Y ALI F G L+EA + + EM +K L P T ++L
Sbjct: 802 NVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L WC G+ +A ++ +M + IC V + +I + K + + +LFD+
Sbjct: 389 VLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE---- 444
Query: 238 GIECDRK---VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ CD YN+++ L K + +A +L + M +KG+AP V+YNS+I C+ L
Sbjct: 445 AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
D A F +ML G+ P + TY +D + G E F + + M P++ TY +
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + + E G P +Y +++ G + A Y EM E +
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624
Query: 412 LP 413
P
Sbjct: 625 SP 626
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 43/299 (14%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y++++ K +A EM P+++T TL I +C +
Sbjct: 586 EKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL---INGFCKNN 642
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ A+ + + I + L+ C+ ++++ A L F+
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL--------------FSE 688
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G G+ + V ++ +IS Y N+ L L +M
Sbjct: 689 LLDG---------------------GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGE 727
Query: 238 GIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
GI CD + Y +I L K GRLV A+ L M KG+ P+++ Y LI LC +L+
Sbjct: 728 GISCDLQTYTTLIDGLLKEGRLVL-ALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLEN 786
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
A++ EM + I+P + Y+A + + G +E F L M G P + TY +LI
Sbjct: 787 AQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 174/440 (39%), Gaps = 61/440 (13%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
++ E+ + + + ++ +LS+ R+ + +A T+F G+ S ++
Sbjct: 68 RQVELTKPASQDSVLARTNVIDTLLSYKRDPY-SALTYFKQLECTRGFVRSLDSLCVLLH 126
Query: 74 ILGKVRK-FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRF 132
IL + + A L++ G++GP + H +G + KRF
Sbjct: 127 ILTRSSETLKQAQNLLNRFISGDSGP-----------MPNILVDHFIG-------STKRF 168
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL----------- 179
F I + LL++ + + DA D+ P+ K N +L
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPW-IKFLNFLLTALVKNDMIYE 227
Query: 180 -------------NGWCNII----------GSSREAERVWMEMSQRGICYDVVSFSCIIS 216
+G C + + EA++ ++E RG+ D ++S +I
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ K ++ L M+ G + +VI A K + +A+ L M GV
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLL 333
NVV +L+K CK KL A + FD+M + G SP TY ++ + G + + L
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M+ PT LI+ F + K+++E + + + +Y +L+ L
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE-AVACDIANIFTYNSLLSWLCKE 466
Query: 394 GKLEEAHQYYMEMKEKQLLP 413
GK+ EA + +M +K L P
Sbjct: 467 GKMSEATTLWQKMLDKGLAP 486
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 4/254 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N +++G+ G +A ++ EM QRGI D+ +++C+++ KAR + K +
Sbjct: 215 NAVAYNTVIDGFFKE-GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
QM G+ D YN++I+ + K+A+ + K M +G+ P+VVT NSL+ LCK
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDT 347
K+ +AR FD M +G I +Y L+ T + L E M G P +
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+ +LIK +++ ++NE+ E G PD +Y+ +I AL GK+++A + + +M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 408 EKQLLPEPKTDELL 421
++ + P T L
Sbjct: 454 DQGVAPSISTYHFL 467
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 159/336 (47%), Gaps = 42/336 (12%)
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
DV +A + F + + + + +++ALC+ + + AE ++ +K V P N ++
Sbjct: 231 DVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNW-TY 289
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK------ARNL----- 224
N ++ G+ + G +EA RV +M+ +GI DVV+ + +++ K AR++
Sbjct: 290 NSLIYGYSST-GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348
Query: 225 ----------HKVL--------------RLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+K++ LF+ M GI D ++N +I A AK ++
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLD 408
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A + M E+GV P+VVTY+++I LC+ K+D+A + F++M+ +G++P+I TYH +
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLI 468
Query: 321 DIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
T ++ L+ M G +P + +I + + + +++ G
Sbjct: 469 QGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLH 528
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ Y L+ L GK+E A + + M + P
Sbjct: 529 PNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 44/382 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G Y T+IA L ++ K D A ++M PS+ T LI+ +C
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH---FLIQGFCTH 474
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSF 175
D+ +A + I F +++ LC+ V DA+++ F N +
Sbjct: 475 GDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVY 534
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G+C ++G A RV+ M GI +VV + +++ Y K + + L LF ++
Sbjct: 535 NTLMDGYC-LVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593
Query: 236 RMGIECDRKVYNAVIHALAK-GRLVK---------------------------------- 260
GI+ +YN ++H L + GR V
Sbjct: 594 HKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD 653
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+AI L K + V ++ T N +I + + R+++EA+ F + + G+ P++ TY +
Sbjct: 654 EAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMM 713
Query: 321 -DIIRTG--EEVFGLLESMRKMGC-QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
++I+ G EE + SM GC QP + ++++ R+ ++I E
Sbjct: 714 TNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSF 773
Query: 377 GPDRSSYTALIHALFLNGKLEE 398
D S+ T LI G E
Sbjct: 774 SLDHSTTTLLIDLFSSKGTCRE 795
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 159/374 (42%), Gaps = 20/374 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNK 165
+LI+ Y + RA F + + + +++ALCR + DA + ++
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P + +++ ++ G+C G +A+ + ++M +G+ D+ F+ II+ K +
Sbjct: 456 GVAP-SISTYHFLIQGFCTH-GDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+FD +G+ + VYN ++ +++A+ + M G+ PNVV Y +L+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLLE--SMRKMGCQ 342
CK ++DE F E+L +GI P+ Y+ L + + G V ++ M + G
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
TY +++ + ++ E+ D ++ +I +F ++EEA
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVER------QIASLKAHQPQSGQNTRVISKKS 456
+ + L+P T ++ + VE + + QP S V+
Sbjct: 694 FASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVV---- 749
Query: 457 DQDREFLQQPETRR 470
RE L++ E R
Sbjct: 750 ---RELLEKREIVR 760
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
++ ++ C ++A L F Q+ + G+ D + + ++ L + + +A+ L+
Sbjct: 110 TYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHR 169
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARK----------------------------------- 293
M G P+V +Y ++K LC RK
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 294 --LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTY 348
+++A F+EM+QRGISP + TY+ ++ + R ++ +L M G P N TY
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI +S Q+ +V +++ G PD + +L+ +L +GK+++A + M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349
Query: 409 K 409
K
Sbjct: 350 K 350
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 7/370 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + + +I K +K D A L D+M P+ VT ++I YC V
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN---VMIEGYCLVG 527
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP-FNTKSFN 176
++ +A + ++ L+S LC V A + ++ + N S
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L G+ G E +W EM+ RG+ D+VSF+ I+ K + K LF +MK
Sbjct: 588 ALLYGFFRE-GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I AL+K + A++ M G +PN VT+ LI LCK+ L
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT-GE-EVFGLLESMRKMGCQPTNDTYIMLIKK 354
A EML + P TY+ FLD T G+ E L S G + ++ +LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKG 766
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++I+E+G PD SY+ +IH L G + +A + + EM K L P+
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 415 PKTDELLQDW 424
+ W
Sbjct: 827 VVAYNIFIRW 836
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA + ++ G+ +V +++ +I K RLF +M G+E + Y +I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
HAL K +++DA+ L M +KG+ V YNSLI CK LD AR M++ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT +Y + + ++ +E R+M G N T+ LI F + ++ ++
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++ ++ P+ ++ +I L G + +A Q Y +M E L P+ T
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 13/310 (4%)
Query: 107 LILIRRYCAVHDV-GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CN 164
L+ IR++ D+ + + + + + GI A C +N+ A L+
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIR-------AYCESRNLDGARGLVVRME 225
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + +N+++ G C + +EA V M G+ D V++ ++ + + L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNM-RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LR+ M R+G + +I L K LV++A SL + + G+ PNV YN+L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
I LCK + D+A + F EM RG+ P TY + + + G E+ L + MR G
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ T Y LI + + + + + + G P +SY+ LI L NG L +
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464
Query: 402 YYMEMKEKQL 411
+ EM E+ +
Sbjct: 465 LHREMAERGI 474
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 65/391 (16%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ R H MI LG V +IDE+R E LV + L C + D+G
Sbjct: 287 ALRITHDMIR-LGFVPSEANCSFMIDELRKKE----LVEEAFSLA-----CKLGDLGMVP 336
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
N F + L+ LC+ + DA+ L + + P N ++ I+++
Sbjct: 337 NVF-------------AYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAILIHA 382
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G +A ++ +M +GI V ++ +I+ Y K +L + L M + G+
Sbjct: 383 LCKR-GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y+ +I L + + + L + M E+G+A N T+ +LI CK +K+DEA + F
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK----- 353
D+M+ + P T++ ++ ++ + F L + M +MG +P N TY LI
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561
Query: 354 ------------------------------KFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
F R +F + +W+E++ G D S+
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 621
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
T +++A E++ + EMKE+ + P+
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + NT + +++N C G AE + EM + + +++C + ++ ++
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L M + G +N +I L K +++AI LM + E G +P+ ++Y+++I
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQ 342
LCK +++A + ++EML +G+ P + Y+ F+ ++ ++ G+ +M + G Q
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 343 PTNDTYIMLIKKFS 356
P DTY L+ S
Sbjct: 860 PNWDTYRALLSGIS 873
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ LC+ + AE + C + +V P N ++N L+ + G +A+ + M
Sbjct: 694 LINNLCKSGYLGSAE--LLCKEMLAGNVLP-NKFTYNCFLD-YFATEGDMEKAKDLHSAM 749
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q G +VSF+ +I KA + + + L ++ G D Y+ +IH L K +
Sbjct: 750 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A L M KG+ P+VV YN I+ + D+A + M++ G+ P TY A
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 320 LDII 323
L I
Sbjct: 869 LSGI 872
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY+ +T + +I L K +A L EM G P+ T L + D+
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL---DYFATEGDM 739
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+A + A + A I F L+ LC+ +Q+A LM + F + S++ I
Sbjct: 740 EKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++ C + G +A +W EM +G+ DVV+++ I + K L ++ M R G
Sbjct: 799 IHELCKM-GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 239 IECDRKVYNAVIHALA 254
++ + Y A++ ++
Sbjct: 858 VQPNWDTYRALLSGIS 873
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 3/167 (1%)
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
G+ N T + ++ L K R+ AR FD+MLQ G+ Y A + R +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
GL+ M G + + Y +L+ + + +V N + G D +Y L++
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+LE A + +M +P + D K+ VE +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 202/452 (44%), Gaps = 51/452 (11%)
Query: 16 SEMRNKIEECGIKVSSELVSEVL-SWVR-NDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
SEM+ K GI+ S ++ +L +++ W+ AFT F A +SG A+ ++T+++
Sbjct: 204 SEMKTK----GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA-LESGLAN-VFTFNTLLS 257
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
L K K + A L DE+ P++V+ +++ +C ++ A +
Sbjct: 258 WLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL---GHCRKDNINAACKVYKEMLDNG 314
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWC-------- 183
F F L+ + ++++A + KD + P +T + II+ G C
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT-TLGIIIKGLCKAGRSFEG 373
Query: 184 -------------------NII-------GSSREAERVWMEMSQRGICYDVVSFSCIISC 217
N I G+ A V+ EM + GI V+++ +I
Sbjct: 374 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K N+ L+L + MKR G++ D K Y +I K R +K A L+ + G++PN
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLE 334
YNS+I ++EA + +M+ GI ++TY + +D ++++G ++ +
Sbjct: 494 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P + + +LI QF N K+ +++ P Y LI F G
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
L+EA + + EM ++ L+P+ T ++L + +
Sbjct: 614 NLQEAFRLHDEMLDRGLVPDNITYDILVNGKF 645
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 47/316 (14%)
Query: 144 LLSALCRYKNVQDAE-HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+L A + N+ +AE H + + ++++I ++ C + +S A + EM
Sbjct: 46 MLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLC-LKPNSGYALSLLREMRAA 104
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL---- 258
G +F+ +I+ K N+ + LRL D M + C + + AV +L KG
Sbjct: 105 GWIPPEGTFTSVITACVKEGNVAEALRLKDDM----VNCGKSMNLAVATSLMKGYCMQGN 160
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++ A+ L+ + E G+ PN VTY+ LI CK +++A + + EM +GI ++ + ++
Sbjct: 161 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 220
Query: 319 FL-----------------DIIRTG--------------------EEVFGLLESMRKMGC 341
L D + +G E L + + G
Sbjct: 221 ILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P +Y +I R KV+ E+ +NG P+ ++T L+ F G +E A
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340
Query: 402 YYMEMKEKQLLPEPKT 417
+ MK+ +LP T
Sbjct: 341 IFHRMKDANILPTDTT 356
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA + +M G+ D + ++ K N+ + + F Q K G+E D++ Y+ +
Sbjct: 23 EARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFV 82
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L A+SL++ M G P T+ S+I K + EA + D+M+ G S
Sbjct: 83 HLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKS 142
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
+ + L+K + + + NE
Sbjct: 143 MNLAVATS--------------------------------LMKGYCMQGNLRSALVLVNE 170
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
ISE+G P++ +Y+ LI NG +E+A ++Y EMK K +
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 211
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 175/389 (44%), Gaps = 24/389 (6%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
E++ +++ + +++K++T +L EM RG + TL ILI +C +H V +
Sbjct: 42 EFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC-----TLSILINCFCFLHHVDYGFS 96
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNII 178
F + F + F L+ +CR + A L+ C DV N+ +
Sbjct: 97 VFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNS-----L 151
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G+C+ G + +++ M +G+ DV S+S I+ Y K + + + LFD+M G
Sbjct: 152 MRGYCSQ-GKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRG 210
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YN +I AL + +DA L + M G++P+++ Y++L+ CK LDE
Sbjct: 211 VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEML 270
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKF 355
F EM +R + P + Y ++ + +V E + ++ G +P TY L+
Sbjct: 271 VLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGL 330
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R +++ ++ E+G P SY L+ + Q EM ++ +
Sbjct: 331 CREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADA 390
Query: 416 KTDELLQDW--SYNKQFVERQIASLKAHQ 442
T L+D+ + +++ + + HQ
Sbjct: 391 VTRTFLKDFLPGNDSPAIKQLLGLFEGHQ 419
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 3/198 (1%)
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
NL L F++M + +N ++ ++ + + + +SL K ME +G+ NV T +
Sbjct: 20 NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM 339
LI C +D F + L+RG P + + +D + R G E GLL+ M +
Sbjct: 80 ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
GC P T L++ + + V K+++ + G PD SY+ I+ K++EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ + EM + ++P T
Sbjct: 200 MELFDEMSHRGVVPNAVT 217
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 38/266 (14%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G+ +A + M R ++ F+ ++S + + V+ LF +M+ GI+ +
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY------------------------- 281
+ +I+ V S+ ++G P+VV +
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 282 ----------NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEE 328
NSL++ C K+D+ R+ F M+ +G+ P + +Y F++ + +E
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L + M G P TY LIK + + + ++ ++ G PD +Y+ L+
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPE 414
G L+E + EM+ + + P+
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPD 284
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 166/363 (45%), Gaps = 18/363 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E++ +++ + K+ KF+ +L ++M+ L T I I +C + A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS---IFINCFCRRSQLSLAL 138
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNI 177
+ + I LL+ C K + DA L M D F F T +
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L+ + EA + +M QRG D+V++ +++ K ++ L L ++M+
Sbjct: 199 FLHN------KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
I+ + ++N +I +L K R V+ A+ L ME KG+ PNVVTYNSLI LC + +A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ ML++ I+P + T++A +D + G+ E L E M + P TY +LI
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F + +++ + P+ +Y LI+ ++E+ + + EM ++ L+
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 415 PKT 417
T
Sbjct: 433 TVT 435
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 170/401 (42%), Gaps = 50/401 (12%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A AL+D+M P LVT T+ + C
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV---VNGLCKRG 237
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D+ A+N + + + F ++ +LC+Y++V+ A L K + P N ++
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP-NVVTY 296
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N CN G +A R+ M ++ I +VV+F+ +I + K L + +L ++M
Sbjct: 297 NSLINCLCNY-GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ D YN +I+ + +A + K M K PN+ TYN+LI CK ++++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTN---- 345
+ + F EM QRG+ TY + + + VF + S R PT+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR----VPTDIMTY 471
Query: 346 -------------DTYIMLIKKFSRWRQFGNVF----------------KVWNEISENGN 376
DT +++ K + N+F + W+
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y +I L L+EA + +MKE LP T
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 164/369 (44%), Gaps = 43/369 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA----- 122
++T+I L K R + A L EM P++VT +L+ + Y D R
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 123 --------------INAFYAYKRFKFAVGIED-------------FQGLLSALCRYKNVQ 155
I+AF+ + A + + + L++ C + +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
+A+ + +KD P N +++N ++NG+C + ++ EMSQRG+ + V+++
Sbjct: 381 EAKQMFKFMVSKDCLP-NIQTYNTLINGFCKC-KRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
II + +A + +F QM + D Y+ ++H L + A+ + K +++
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ N+ YN++I+ +CKA K+ EA F + I P + TY+ + + R +E
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L M++ G P + TY LI+ R ++ E+ +G D S+ +L+ +
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNM 614
Query: 391 FLNGKLEEA 399
+G+L+++
Sbjct: 615 LHDGRLDKS 623
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA+ L M + P++V +N L+ + K K + ++M GIS + TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 319 FLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F++ ++ +L M K+G +P T L+ + ++ + + +++ E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA +M ++ P+ T
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 19/328 (5%)
Query: 102 TKQTLLILIRRYCAVH---DVGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYKNVQDA 157
T +T IL R+ A D+ A+ F + R + A + F LL AL + ++ A
Sbjct: 132 TPRTFPILFERFAASQRRPDI--AVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKA 189
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L+ + FP + ++N + +GWC + +SR + + +M++ GI +++ I+
Sbjct: 190 ASLVRALERRFPPDVVTYNTLADGWCRVKDTSRALD-LLRQMAESGIAPTKTTYNVILKG 248
Query: 218 YSKARNLHKVLRLFDQMKRMGIE---CDRKV--YNAVIHALAKGRLVKDAISLMKSMEEK 272
+ +A L F QMK+ G + C V Y +IH L + A L M ++
Sbjct: 249 FFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKE 308
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEV 329
G P + TYN+LI+ +CK +++A FD+M+++ P + TY + + G +
Sbjct: 309 GCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRA 368
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIH 388
L+E M+ GC+P TY +LI+ + ++ +S+ P++ +Y +I
Sbjct: 369 MKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVIS 428
Query: 389 ALFLNGKLEE---AHQYYMEMKEKQLLP 413
A+F+ + E+ A + MEM E+ LP
Sbjct: 429 AMFVRKRAEDMAIAARMVMEMVERGYLP 456
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 12/269 (4%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEM--SQRGICYDVVSFSCIISCYSKARNLH 225
PF ++F I+ + A R+++ + S R + D+ F+ ++ K+R+
Sbjct: 129 LPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHR-VAQDLPLFNSLLDALGKSRHAS 187
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L ++R D YN + + + A+ L++ M E G+AP TYN ++
Sbjct: 188 KAASLVRALERR-FPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVIL 246
Query: 286 KPLCKARKLDEARQAFDEMLQRG-----ISPTIRTYHAF---LDIIRTGEEVFGLLESMR 337
K +A +L A F +M +RG P + +Y L + ++ L + M
Sbjct: 247 KGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMS 306
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K GC PT TY LI+ + + V++++ P+ +YT LI L GK++
Sbjct: 307 KEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKID 366
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
A + MK + P +T +L +S+
Sbjct: 367 RAMKLMERMKNEGCEPVVQTYNVLIRYSF 395
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 181/396 (45%), Gaps = 17/396 (4%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV EVL + + FF WAGK+ + H + Y +I L +
Sbjct: 82 LEVLKLKVDHRLVREVLK-IDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGML 140
Query: 82 DTAWALIDEMRGGE--TGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
W I EM GP+ +++ +++ V +A++ FY K K
Sbjct: 141 GEMWKTIQEMVRSTCVIGPADLSE-----IVKVLGKAKMVNKALSIFYQIKGRKCKPTSN 195
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNK-DVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ ++ L + + + L CN+ D P +T +++ ++ + + G A ++
Sbjct: 196 TYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP-DTVTYSALIAAFGKL-GRDDSAISLF 253
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
EM + G+ ++ I+ Y K + K L L +MK G Y +I + K
Sbjct: 254 DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKA 313
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
V++A S+ +M ++G P+VV N+LI L KA +L +A + F+EM +P + TY
Sbjct: 314 GKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY 373
Query: 317 HAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ + + E F E M++ G P++ TY +LI F + + + E+
Sbjct: 374 NTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMD 433
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
E G P ++Y +LI+AL + E A++ + E++E
Sbjct: 434 EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE 469
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 164/358 (45%), Gaps = 15/358 (4%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +IA GK+ + D+A +L DEM+ P+ T+L + Y + V +A+
Sbjct: 230 TVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI---YFKLGRVEKALG 286
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
K A+ + + L+ + + V++A + +F N + K +++N N
Sbjct: 287 LVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA-YSIFMN--MLKEGCKPDVVLINNLIN 343
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCIISCY--SKARNLHKVLRLFDQMKRMGI 239
++G + +A +++ EM +VV+++ +I SKAR L +++MK G+
Sbjct: 344 LLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGV 402
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y+ +I K V+ A+ L++ M+EKG AP Y SLI L KA++ + A +
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F E+ + + R Y + + + G E L M+K+GC P Y L+
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + + ENG PD +S+ +++ G + A + + MK ++ P+
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD 580
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + S I+ KA+ ++K L +F Q+K + YN++I L +
Sbjct: 149 EMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEG 208
Query: 258 LVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ L M +G P+ VTY++LI K + D A FDEM + G+ PT + Y
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268
Query: 317 HAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
L I + G E+ GL++ M++ GC T TY LIK + + + ++ + +
Sbjct: 269 TTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLK 328
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G PD LI+ L G+L +A + + EM+ Q P
Sbjct: 329 EGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP 368
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 56/322 (17%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A++ F+ K+ G + +I +LGK + A L +EM + P++VT T
Sbjct: 317 EEAYSIFMNMLKE-GCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNT 375
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMF 162
++ + RA AF Y++ K + + L+ C+ V+ A L+
Sbjct: 376 VIKAL-----FESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAER------VWMEMSQRGICYDVVSFSCIIS 216
+ K F +C++I + +A+R ++ E+ + ++ +I
Sbjct: 431 ------EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIK 484
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--- 273
K L + + LF++MK++G D YNA++ + + + +A SL+++MEE G
Sbjct: 485 HLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTP 544
Query: 274 --------------------------------VAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ P+VV+YN+++ L +A +EA +
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Query: 302 DEMLQRGISPTIRTYHAFLDII 323
EM +G + TY + L+ +
Sbjct: 605 KEMNSKGFEYDLITYSSILEAV 626
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 52 FLW--AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
FLW K++G S+ Y +I K + + A L++EM P +L+
Sbjct: 391 FLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA 450
Query: 110 I---RRYCAVHDVGRAI--NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
+ +RY A +++ + + N Y+ R +AV I+ G L ++ + + CN
Sbjct: 451 LGKAKRYEAANELFQELRENCGYSSARV-YAVMIKHL-GKCGRLSEAVDLFNEMKKLGCN 508
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
DV+ ++N +++G + G + EA + M + G D+ S + I++ +++
Sbjct: 509 PDVY-----AYNALMSGMVRV-GMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +F +MK I+ D YN V+ L++ + ++A LMK M KG +++TY+S+
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622
Query: 285 IKPLCK 290
++ + K
Sbjct: 623 LEAVGK 628
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 160/369 (43%), Gaps = 52/369 (14%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ + A EM+ P L + LL A+ D GR A + + I
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILL------SALSDSGRMAEAHALFSAMTCSPDIM 209
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSREAERV 195
+ L+ C+ +A+ LM K++ + N +++II+N +C + EA V
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLM---KEILKAGYEPNVFTYSIIINCYCKL-DKVEEAWEV 265
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+M+M + + V+F+ +I+ + KA L ++LF +M+++G + YN +I +L K
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325
Query: 256 GRL-VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR------- 307
R V A+ L +E G+ P +VTYNSLI+ C AR+L EA Q FDEM +
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVIT 385
Query: 308 ---------------------------GISPTIRTYHAFLD-IIRTGEEVFGLL--ESMR 337
G +PT+ TY ++ + GE LL E M+
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMK 445
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC P + LI + + + ++ + G PD +Y LI L ++E
Sbjct: 446 LAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 505
Query: 398 EAHQYYMEM 406
+A + + M
Sbjct: 506 DAQRLFDGM 514
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 30/372 (8%)
Query: 58 QSGYAHSTREYHTMIA----ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY 113
Q+G T H ++ + G+VR A A + +MR S V T ++++
Sbjct: 94 QAGPFLPTSASHNILLRGFFMAGRVRD---ALAHLQDMR---KSSSSVATGTYNLVLKGL 147
Query: 114 C----AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKD 166
C + + + +A+ F K +E + LLSAL + +A L M C+ D
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPD 207
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ ++N++++G+C I G + EA+ + E+ + G +V ++S II+CY K + +
Sbjct: 208 IM-----TYNVLMDGYCKI-GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +M + +N +I K +++DAI L ME+ G +VTYN+LI
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 287 PLCKAR-KLDEARQAFDEMLQRGISPTIRTYHA----FLDIIRTGEEVFGLLESMRKMGC 341
LCK R + A F+++ G++PTI TY++ F D R E + E K C
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK--C 379
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +LI + R+ K ++ +G P +Y LI+ G+L+ A
Sbjct: 380 APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439
Query: 402 YYMEMKEKQLLP 413
++ +MK P
Sbjct: 440 FFEKMKLAGCAP 451
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 162/373 (43%), Gaps = 19/373 (5%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+A + Y+ +I K + A ++ +M+ P+ T TLL+ + C + +
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL---CEIGQMS 84
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIIL 179
A+ F + F LL V+DA HL K T ++N++L
Sbjct: 85 SALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVL 144
Query: 180 NGWCNIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
G C S+ E+ + EM G+ D+ S+ ++S S + + + LF M
Sbjct: 145 KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT- 203
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
D YN ++ K +A SLMK + + G PNV TY+ +I CK K++E
Sbjct: 204 --CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + F +M++ P T++ + + G E+ L M K+GC+ T TY LI
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 354 KFSRWRQFGNVFK---VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ R G V+ ++N++ G P +Y +LI +L EA QY+ EM E +
Sbjct: 322 SLCKKR--GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGK 378
Query: 411 LLPEPKTDELLQD 423
P T +L D
Sbjct: 379 CAPNVITYSILID 391
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-ILIRRYCAVHDVGRAINAF 126
++T+IA K + A L EM ++VT TL+ L ++ V+ A++ F
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY---TAVDLF 337
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ I + L+ C + + +A + N +++I+++G C +
Sbjct: 338 NKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKV- 396
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+EA + +M G VV++ +I+ + K L L F++MK G + ++
Sbjct: 397 RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIF 456
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I L K D + L+ M +G P+V+TYN LI LC A ++++A++ FD M
Sbjct: 457 NTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM-- 514
Query: 307 RGISPTIRTYH 317
+P + T++
Sbjct: 515 -ACAPNVTTFN 524
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 15/309 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++GY + Y +I K+ K + AW + +M P+ VT TL I +C
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL---IAGFCKAG 292
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN-VQDAEHLMFCNK----DVFPFNT 172
+ AI F ++ I + L+ +LC+ + V A L NK + P
Sbjct: 293 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLF--NKLEGAGLTP-TI 349
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLF 231
++N ++ G+C+ S EA + + EM G C +V+++S +I K R + + +
Sbjct: 350 VTYNSLIQGFCDARRLS-EAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTL 406
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ MK G Y +I+ K +K A+ + M+ G APN V +N+LI LCKA
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKA 466
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ ++ + M G P + TY+ + + + V M C P T+ L
Sbjct: 467 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTTFNFL 526
Query: 352 IKKFSRWRQ 360
I+ ++
Sbjct: 527 IRGLCAQKK 535
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+F N ++N+++ G+C G +A V+ +M G+ + + + ++ + +
Sbjct: 27 LFAPNAHTYNVLIRGFCKG-GQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 85
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L+LF +M+ +N ++ V+DA++ ++ M + + TYN ++K
Sbjct: 86 ALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLK 145
Query: 287 PLC----KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
LC A +L++A + F EM G+ P + +YH L + + M C
Sbjct: 146 GLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS 205
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY +L+ + + Q + EI + G P+ +Y+ +I+ K+EEA +
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265
Query: 403 YMEMKEKQLLPEPKT 417
+M+M E +P T
Sbjct: 266 FMKMIESNCVPNAVT 280
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 68 YHTMIAILGKVRK-FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T+I L K R TA L +++ G P++VT +L I+ +C + A+ +
Sbjct: 316 YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL---IQGFCDARRLSEAMQ-Y 371
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGW 182
+ K A + + L+ LC+ + +++A + +D+ + ++ ++NG+
Sbjct: 372 FDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTL---EDMKAHGYTPTVVTYGGLINGF 428
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C G + A + +M G + V F+ +I KA + LRL M G + D
Sbjct: 429 CKC-GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN +I L V+DA L M APNV T+N LI+ LC +K++EAR D
Sbjct: 488 VITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 19/245 (7%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++S AR + LRLF ++ + YN +I KG + A+S+ M+ G
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVF 330
+ PN T N+L+ LC+ ++ A + F EM PT +++ L G +
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN----VFKVWNEISENGNGPDRSSYTAL 386
L+ MRK TY +++K + N + + E+ +G PD SY L
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW------SYNKQFVERQIASLKA 440
+ AL +G++ EAH + M P+ T +L D +Y Q + ++I LKA
Sbjct: 183 LSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEI--LKA 237
Query: 441 -HQPQ 444
++P
Sbjct: 238 GYEPN 242
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +++ L RK D A L E+ G P+ T +LIR +C + +A++ F
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPN---AHTYNVLIRGFCKGGQMHQAVSVFSD 57
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
K GLL N + N +L G C I G
Sbjct: 58 MKS----------SGLLP------------------------NASTMNTLLLGLCEI-GQ 82
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
A +++ EM S + ++ + A + L M++ YN
Sbjct: 83 MSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNL 142
Query: 249 VIHALA----KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V+ L ++ A+ K M+ GV P++ +Y+ L+ L + ++ EA F M
Sbjct: 143 VLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM 202
Query: 305 LQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
SP I TY+ +D + G+ E L++ + K G +P TY ++I + + +
Sbjct: 203 T---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKV 259
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++V+ ++ E+ P+ ++ LI G LE+A + + EM++
Sbjct: 260 EEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 160/343 (46%), Gaps = 16/343 (4%)
Query: 76 GKVRKFDT--AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
G VR+ D A L++ M G E PS LI++ CA A A +
Sbjct: 68 GLVRRGDLEEALRLVESMSGLE--PS-AAPGPCAALIKKLCASGRTAEARRVLAACEPDV 124
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
A + +++ C + DA + + + P ++ ++N ++ G C G + A
Sbjct: 125 MA-----YNAMVAGYCVTGQL-DAARRLVADMPMEP-DSYTYNTLIRGLCGR-GRTGNAL 176
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
V +M +RG DVV+++ ++ K + ++L D+M+ G D YN V++ +
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ V DAI +KS+ G PN V+YN ++K LC A + ++A + EM Q+G P +
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296
Query: 314 RTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
T++ + + R G E +L+ + K GC P + +Y ++ F + ++
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G PD SY L+ AL G+++ A + ++K+K P
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 16/347 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ K + A L+DEMR P ++T +++ C V AI
Sbjct: 194 YTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYN---VVVNGICQEGRVDDAIEFLK 250
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + +L LC + +DAE LM ++ +P N +FN++++ C
Sbjct: 251 SLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRR- 309
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G A V ++ + G + +S++ I+ + K + + + + + M G D Y
Sbjct: 310 GLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSY 369
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL +G V A+ L+ +++KG P +++YN++I L KA K EA + +EM+
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429
Query: 307 RGISPTIRTYHAFLDIIRTG-------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+G+ P I TY I +G EE ++ MG +P Y ++ + R
Sbjct: 430 KGLQPDIITYST----ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+ N ++ + NG P+ S+YT LI L G ++EA + E+
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 169/361 (46%), Gaps = 14/361 (3%)
Query: 68 YHTMI-AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T+I + G+ R + L D +R G P +VT IL+ C +A+
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCV-PDVVTYT---ILLEATCKRSGYKQAMKLL 214
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNI 185
+ A I + +++ +C+ V DA E L NT S+NI+L G C
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT- 273
Query: 186 IGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ R +AE++ EMSQ+G +VV+F+ +IS + + + + DQ+ + G +
Sbjct: 274 --AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN ++HA K + + A++ ++ M +G P++V+YN+L+ LC+ ++D A + +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ +G +P + +Y+ +D + + G +E LL M G QP TY + R +
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDR 451
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+ + ++ + G P+ Y A++ L + A ++ M +P T +
Sbjct: 452 IEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTI 511
Query: 421 L 421
L
Sbjct: 512 L 512
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 15/258 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q GY + ++ +I+ L + + A ++D++ P+ ++ +L +C
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL---HAFCKQK 345
Query: 118 DVGRAINAFYAYKRFKFAVG----IEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFN 171
+ RA+ A+ + G I + LL+ALCR V A L+ KD P
Sbjct: 346 KMDRAM----AFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV- 400
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N +++G G ++EA + EM +G+ D++++S I S + + + +R F
Sbjct: 401 LISYNTVIDGLTKA-GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF 459
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+++ MGI + +YNA++ L K R +AI L M G PN TY LI+ L
Sbjct: 460 CKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYE 519
Query: 292 RKLDEARQAFDEMLQRGI 309
+ EAR+ E+ RG+
Sbjct: 520 GLVKEARELLGELCSRGV 537
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G +T Y+ ++ L +++ A L+ EM P++VT +LI
Sbjct: 248 FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN---MLIS 304
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
C V A+ ++ + +L A C+ K + A + ++ +P
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ S+N +L C G A + ++ +G ++S++ +I +KA + L
Sbjct: 365 -DIVSYNTLLTALCRG-GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L ++M G++ D Y+ + L + +++AI +++ G+ PN V YN+++ LC
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLC 482
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLES 335
K R+ A F M+ G P TY ++ +++ E+ G L S
Sbjct: 483 KRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCS 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D YNA++ + A L+ M + P+ TYN+LI+ LC + A
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALV 177
Query: 300 AFDEMLQRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
D+ML+RG P + TY L+ R+G ++ LL+ MR GC P TY +++
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + + + + +G P+ SY ++ L + E+A + EM +K P
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 417 TDELLQDWSYNKQFVERQIASL 438
T +L + + VE + L
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVL 319
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSME--EKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
R V N + L + +++A+ L++SM E AP +LIK LC + + EAR+
Sbjct: 59 RAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCA--ALIKKLCASGRTAEARRV 116
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRK----MGCQPTNDTYIMLIKKFS 356
P + Y+A + G V G L++ R+ M +P + TY LI+
Sbjct: 117 L-----AACEPDVMAYNAMV----AGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLC 167
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ GN V +++ G PD +YT L+ A ++A + EM+ K P+
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227
Query: 417 TDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
T ++ + + V+ I LK+ P G +S
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKS-LPSHGCEPNTVS 263
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 168/379 (44%), Gaps = 26/379 (6%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
++++ + +I+ K++ + TA +LI M P T TL I+I C R +
Sbjct: 83 VKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKP---TVHTLNIVINCLC------RLSH 133
Query: 125 AFYAYK--RFKFAVGIE----DFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNI 177
A + + F +G+E F +++ LC NV A + KD+ + ++ +
Sbjct: 134 AVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGA 193
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
I NG C + G S A +M ++ DV ++S ++ K + + L LF QM
Sbjct: 194 ITNGLCKV-GHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGK 252
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI+ D YN +IH L K+A L+ +M KG+ P+V T+N + K + A
Sbjct: 253 GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRA 312
Query: 298 RQAFDEMLQRGISPTIRTY------HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ F M+ GI + TY H L+ ++ EVF L+ S GC P TY L
Sbjct: 313 KSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISK---GCLPNIVTYTSL 369
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + E+ NG P+ +++ LI + GK A + ++ M +
Sbjct: 370 IHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQ 429
Query: 412 LPEPKTDELLQDWSYNKQF 430
LP +T ++ D + F
Sbjct: 430 LPNLQTCAIILDGLFKCNF 448
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 42/320 (13%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + G++ LC+ V +A +L K + P + ++N +++G CN +EA +
Sbjct: 223 VTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQP-DLFTYNCLIHGLCNF-DRWKEAAPL 280
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
M ++GI DV +F+ I + K + + +F M MGIE D Y ++I A
Sbjct: 281 LANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCM 340
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+KDA+ + M KG PN+VTY SLI C+ + +++A EM+ G+ P + T
Sbjct: 341 LNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVT 400
Query: 316 YHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLI----------KKFSRWRQ-- 360
+ + + + G+ V L M K G P T +++ + S +R+
Sbjct: 401 WSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELE 460
Query: 361 -----------------------FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ ++++ +S G D +Y +I L G L+
Sbjct: 461 KMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLD 520
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
+A M+M+E P T
Sbjct: 521 DAEDLLMKMEENGCPPNECT 540
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 140/330 (42%), Gaps = 43/330 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ LC + ++A L+ K + P + ++FN+I + G A+ ++
Sbjct: 261 YNCLIHGLCNFDRWKEAAPLLANMMRKGIMP-DVQTFNVIAGRFFKT-GMISRAKSIFSF 318
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M GI +DVV+++ II + + + +FD M G + Y ++IH + +
Sbjct: 319 MVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKN 378
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ + M G+ PNVVT+++LI +CKA K A++ F M + G P ++T
Sbjct: 379 MNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAI 438
Query: 319 FLDII---RTGEEVFGLLESMRKMG---------------CQP--TND------------ 346
LD + E L + KM C ND
Sbjct: 439 ILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKG 498
Query: 347 ------TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
TY ++IK + + + ++ ENG P+ +Y + L ++ ++
Sbjct: 499 VKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKST 558
Query: 401 QYYMEMKEKQLLPEPKTDELLQDW-SYNKQ 429
+Y M MK+K + T + L ++ S NK+
Sbjct: 559 KYLMFMKDKGFQADATTTKFLINYFSANKE 588
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 5/239 (2%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V F+ + S +K ++ + L M +G++ N VI+ L + S++
Sbjct: 83 VKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLG 142
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M + GV P++VT+N+++ LC + +A + D + G T A + + + G
Sbjct: 143 LMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVG 202
Query: 327 EEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
L L+ M + C Y ++ + ++++++ G PD +Y
Sbjct: 203 HSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYN 262
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER--QIASLKAH 441
LIH L + +EA M K ++P+ +T ++ + + R I S H
Sbjct: 263 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVH 321
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
+I +C ++ + A+ F I + L+ C KN+ A + + N
Sbjct: 334 IIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNG 393
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P N +++ ++ G C G A+ +++ M + G ++ + + I+ K +
Sbjct: 394 LDP-NVVTWSTLIGGVCKA-GKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSE 451
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ LF ++++M + + +YN ++ + + DA+ L + KGV +VVTYN +IK
Sbjct: 452 AMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIK 511
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
LCK LD+A +M + G P TY+ F+
Sbjct: 512 GLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFV 545
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 9/272 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H Y ++I + + A + D M P++VT +L I +C ++
Sbjct: 323 GIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSL---IHGWCETKNM 379
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-KNVQDAEHLMFCNKDVFPFNTKSFNII 178
+A+ + + L+ +C+ K V E + +K N ++ II
Sbjct: 380 NKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAII 439
Query: 179 LNGW--CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
L+G CN EA ++ E+ + +++ ++ I+ + L+ L LF +
Sbjct: 440 LDGLFKCNF---HSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSS 496
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D YN +I L K L+ DA L+ MEE G PN TYN ++ L + ++ +
Sbjct: 497 KGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISK 556
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+ + M +G T ++ +E
Sbjct: 557 STKYLMFMKDKGFQADATTTKFLINYFSANKE 588
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 173/381 (45%), Gaps = 22/381 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G S Y+ +I K A AL +EM P++ + T++ +C
Sbjct: 300 KAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIM---YGFCKEG 356
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTK 173
+ A + I + L+ CR N+ +A + L F N FN
Sbjct: 357 KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN---LSFNIV 413
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G C + G A ++ +M RGI DVV+++ +++ K N+ FD+
Sbjct: 414 TYNTLIDGLCRL-GDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDE 472
Query: 234 MKRMGIECDRKVYNA-VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M +G+ D+ Y A ++ L G K A L + M KG P+V+TYN + LCK
Sbjct: 473 MLHVGLAPDQFAYTARIVGELKLGDTAK-AFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTND 346
L+EA + +M++ G P TY +F+ +R G E+F M G PT
Sbjct: 532 NLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF---YDMLSRGQTPTVV 588
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +LI + + + E+ E G P+ +Y LI+ K+++A ++++EM
Sbjct: 589 TYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEM 648
Query: 407 KEKQLLPEPKTDELLQDWSYN 427
+EK + P T +L + + N
Sbjct: 649 QEKGIFPNKYTYTILINENCN 669
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L+ +C G + A + +M +RG V+F+ +I+ SK L + L +
Sbjct: 239 TYNTMLHSFCKG-GEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQE 297
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + G+ YN +I K L+ +A++L + M +GV+P V ++N+++ CK K
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+ +ARQ +ML++ + P I +Y+ + R G E F LL+ +R TY
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI R K+ ++ G PD +YT L++ G + A +++ EM
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477
Query: 411 LLPE 414
L P+
Sbjct: 478 LAPD 481
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 20/300 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF- 126
Y+T+I L ++ +TA L ++M P +VT +L+ C + ++ A F
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT---VLVNGACKLGNMLMAKEFFD 471
Query: 127 ------YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN 180
A +F + I G L K + E ++ FP + ++N+ +N
Sbjct: 472 EMLHVGLAPDQFAYTARI---VGELKLGDTAKAFKLQEEML---TKGFPPDVITYNVFVN 525
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C + G+ EA + +M + G D V+++ + + + +L + +F M G
Sbjct: 526 GLCKL-GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
Y +IHA A + A++ M+EKGV PNV+TYN LI CK RK+D+A +
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKF 644
Query: 301 FDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F EM ++GI P TY ++ + +E L M +P + T+ L+KK +
Sbjct: 645 FIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A V+ M + GI V +++ ++ + K + + L L +M+ G +N +I
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L+K ++ A L++ M + G+ + TYN LI CK L EA ++EM+ RG+S
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339
Query: 311 PTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT+ +++ + + G+ + L M K P +Y LI F R G F +
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+E+ + +Y LI L G LE A + +M + + P+ T +L
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++++ G+ N + V+ +M + DV + + I+ L K L ++ M
Sbjct: 175 DVLIGGYLN-----YQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG 229
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI YN ++H+ KG V+ A+ L+ M+E+G P+ VT+N LI L K +L
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A+ EM + G+ + TY+ + + G E L E M G PT ++ ++
Sbjct: 290 QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIM 349
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
F + + + + +++ + PD SY LI+ G + EA E++ + L
Sbjct: 350 YGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 38/205 (18%)
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++ L G L + + + M P+V N ++K L L +A + + M +
Sbjct: 172 GIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEY 231
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN- 363
GI PT+ TY+ L G EV L+ M++ GC P+ T+ +LI S+ +
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291
Query: 364 ----------------------------------VFKVWNEISENGNGPDRSSYTALIHA 389
+W E+ G P +S+ +++
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPE 414
GK+ +A Q +M +K L+P+
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPD 376
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
++EM ++G+ +V++++ +I+ + K R + + + F +M+ GI ++ Y +I+
Sbjct: 610 FLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCN 669
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++A+ L M K + P+ T+ +L+K L K K+ +A Q + ++ G
Sbjct: 670 MGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDG 721
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 23/400 (5%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V VL ++ D + AF FF W+ ++G+ HS Y + IL R + A +++ EM
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 94 GETGPSL---------VTKQTLLILIRRYCAVHDVG---RAINAFYAYKRFKFAVGIEDF 141
+ + V + + + D+G AI F KRF+
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 142 QGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWM 197
GLL + D + KD+ + ++NI+++ C G A ++
Sbjct: 231 NGLLHRFAKLGKTDDVKRFF---KDMIGAGARPTVFTYNIMIDCMCKE-GDVEAARGLFE 286
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM RG+ D V+++ +I + K L + F++MK M E D YNA+I+ K
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ + + M+ G+ PNVV+Y++L+ CK + +A + + +M + G+ P TY
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 318 AFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ +D I + F L M ++G + TY LI + +++ ++
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P+ +SY ALIH ++ A + E+K + + P+
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 184/405 (45%), Gaps = 10/405 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G T Y++MI GKV + D +EM+ P ++T L I +C
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL---INCFCKF 345
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
+ + + K + + L+ A C+ +Q A + V N ++
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ C I G+ +A R+ EM Q G+ ++VV+++ +I A + + LF +M
Sbjct: 406 TSLIDANCKI-GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ + YNA+IH K + + A+ L+ ++ +G+ P+++ Y + I LC K++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLI 352
A+ +EM + GI Y +D ++G GL L+ M+++ + T T+ +LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 353 KKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + +N IS + G + + +TA+I L + ++E A + +M +K L
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 412 LPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKS 456
+P+ L D ++ + V +A L+ + G +++ S
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALA-LRDKMAEIGMKLDLLAYTS 688
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 20/301 (6%)
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILN-GWCNII 186
A+K FK+++ F+ + + C H++FC + + N+ ++L+ C++
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCI------VAHILFCARMYYDANSVLKEMVLSKADCDVF 178
Query: 187 GSSREAERVWMEMSQRGICYDVVS-FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +W S R +C F + S L + ++ F +MKR + +
Sbjct: 179 ------DVLW---STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 229
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
N ++H AK D K M G P V TYN +I +CK ++ AR F+EM
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 306 QRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG+ P TY++ +D + G ++ E M+ M C+P TY LI F ++ +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ + E+ NG P+ SY+ L+ A G +++A ++Y++M+ L+P T L
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 423 D 423
D
Sbjct: 410 D 410
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 164/427 (38%), Gaps = 77/427 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL----------IRRYCAVH 117
Y+ +I K K EM+G P++V+ TL+ I+ Y +
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 118 DVGRAINAFYAYKRFKFA-------------------VGIE----DFQGLLSALCRYKNV 154
VG N Y Y A VG+E + L+ LC + +
Sbjct: 395 RVGLVPNE-YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 155 QDAEHLMFCNKD---VFPFNTKSFNIILNGWCNIIGSSR--------------------- 190
++AE L F D V P N S+N +++G+ R
Sbjct: 454 KEAEEL-FGKMDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 191 ------------EAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
EA +V M EM + GI + + ++ ++ Y K+ N + L L D+MK +
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDE 296
IE + +I L K +LV A+ + G+ N + ++I LCK +++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIK 353
A F++M+Q+G+ P Y + +D + G E L + M ++G + Y L+
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
S Q E+ G PD +++ + G ++EA + + + QLL
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 751
Query: 414 EPKTDEL 420
+ L
Sbjct: 752 SDNDNAL 758
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y+ +I K + D A L++E++G P L+ T I C++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF---IWGLCSLEK 522
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNI 177
+ A K + L+ A + N + HL+ K++ +F +
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C S+ + + G+ + F+ +I K + LF+QM +
Sbjct: 583 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ DR Y +++ K V +A++L M E G+ +++ Y SL+ L +L +A
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 298 RQAFDEMLQRGISP 311
R +EM+ GI P
Sbjct: 703 RSFLEEMIGEGIHP 716
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 9/302 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y +I L + A L +M P+L + L I +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL---IHGFVKAK 486
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
++ RA+ K + + + LC + ++ A+ +M K+ N+ +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ + G+ E + EM + I VV+F +I K + + K + F+++
Sbjct: 547 TLMDAYFKS-GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 237 -MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ + ++ A+I L K V+ A +L + M +KG+ P+ Y SL+ K +
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 296 EARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
EA D+M + G+ + Y + L ++ LE M G P I ++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Query: 353 KK 354
KK
Sbjct: 726 KK 727
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 33/395 (8%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
F W G+Q GY HS Y+ + L K A+ +M+ P T I++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYS---IVL 80
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDV 167
R C ++ +A + + + + ++ C+ V DA + M
Sbjct: 81 RGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGC 140
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHK 226
P + +FN +L G C+ G V E M++ G +V+S+S ++ KA L +
Sbjct: 141 VP-DVVTFNSLLKGLCS--GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY----- 281
RL+++M D Y + + L K V +A + M KG + V +
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257
Query: 282 ------------NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII------ 323
N +I+ LC++ LDEA + F+EM+ R P+ ++ + +
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G +F ++SM++ C P +TY +++ + +Q ++ NE++ G PD +Y
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+AL+ L GKL+ A EM ++ + P+ TD
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 147/310 (47%), Gaps = 42/310 (13%)
Query: 139 EDFQGLLSALCRYKNVQDAEHL---MFCNKDVF-PFNTKSFNIILNGWCNIIGSSREAER 194
E F L+ A+C+ K + D L M K+ + P N +++NI+++ C EA+
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA-KQLDEAQE 360
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ EM+ G+ DVV++S ++ K L + L ++M + G+ D ++++AL+
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE------------------ 296
K V A+S +++M+ +G P++VTYN+L+ LCKA ++DE
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480
Query: 297 -----------------ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRK 338
A F EM++RG+ P YH+ LD + R G E LE ++
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA-LELLKT 539
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
C+P + M++ + + + +V +++ G D +Y +++ L GK+++
Sbjct: 540 SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDK 599
Query: 399 AHQYYMEMKE 408
A Q + E
Sbjct: 600 ARQLVDDASE 609
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 28/293 (9%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+P + +++I+L G C G +A+ + ++ + G+ +V+++S +I KA +
Sbjct: 69 YPPDDFTYSIVLRGLCKA-GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 228 LRLFDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L +F M G C D +N+++ L G + +A L + M + G PNV++Y++L+
Sbjct: 128 LEIFKTMSSGG-GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
LCKA +LDEA + ++EM+++ P + Y +F+ + V + RKM + +
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSK 246
Query: 346 DTYIM--------------------LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+ +I+ R K + E+ + P +
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT 306
Query: 386 LIHALFLNGKLEEA---HQYYMEMKEKQLLPEPKTDELLQD-WSYNKQFVERQ 434
LIHA+ + +L + Q MKE P +T ++ D KQ E Q
Sbjct: 307 LIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 18/250 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y ++ L K+ K D A L++EM P T ++L + + V
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK---AGKV 425
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTK 173
A++ K + + LL LC+ + +A + C DVF
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF----- 480
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S+ II+ C G + A ++ EM +RG+ D V + ++ ARN + L L +
Sbjct: 481 SYTIIITALCRS-GQAAGAHAIFQEMVKRGVLPDTVLYHSLLD--GLARNGLEDLAL-EL 536
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K + D ++ V+ L K +DA +++ M + G + TY S++ L K K
Sbjct: 537 LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGK 596
Query: 294 LDEARQAFDE 303
+D+ARQ D+
Sbjct: 597 VDKARQLVDD 606
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 10/279 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC K ++A L+ D P N S++ ++NG+ G + +++EM
Sbjct: 171 LLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTE-GQVDKPYNLFLEM 229
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRL 258
RGI DVV+++ +I KA+ + +F QM G++ + YN +IH L+ G+
Sbjct: 230 MDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW 289
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
K+ + +++ M G PN TY SL+ LCK + EAR FD M+ +GI P++ TY
Sbjct: 290 -KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L T E+ LL M G P + + + +++ ++N++ + G
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG 408
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
PD SY ALI AL G++++A + +M + + P+
Sbjct: 409 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 25/435 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y +I L K+ + D A ++M P +V +L + C V
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSL---VYGLCTV 461
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPF 170
+ F+ I F +L LC+ V + + L M DV +
Sbjct: 462 DKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISY 521
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
NT +++G C + G+ EA ++ M G+ D S++ ++ Y KA +
Sbjct: 522 NT-----LIDGHC-LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH 575
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F +M GI YN ++H L + + +A L +M G ++ TYN ++ LCK
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDT 347
+ +DEA + F + +G+ I T++ + + G E+ L ++ G T
Sbjct: 636 SNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVT 695
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y ++++ +++ + +NG P+ AL+ L G + A Y ++
Sbjct: 696 YRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 755
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQD-------R 460
E+ E T +L + ++ + K ++ + N+ + KK+ + R
Sbjct: 756 ERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFR 815
Query: 461 EFLQQPETRRVVRHQ 475
E L + T VV +
Sbjct: 816 EMLMKGLTPDVVTYN 830
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 154/372 (41%), Gaps = 12/372 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA F F GK G S Y M+ L++ M P+
Sbjct: 326 EARFFFDSMIGK--GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN---HHI 380
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLMFC 163
I Y + +A++ F ++ + + L+ ALC+ V DAE
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
N+ V P + F+ ++ G C + + E ++ EM GI ++V F+ I+ K
Sbjct: 441 NEGVTP-DIVVFSSLVYGLCTV-DKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + RL D ++ MG+ D YN +I + +A L++ M G+ P+ +YN+
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
L+ CKA ++D A F +ML GI+P + TY+ L + + E L +M G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ TY +++ + K++ + G + ++ +I AL G+ E+A
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678
Query: 401 QYYMEMKEKQLL 412
+ + L+
Sbjct: 679 DLFAAIPANGLV 690
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ +LN C G REA + M +GI V ++ ++ Y+ L ++ L
Sbjct: 307 NCCTYGSLLNYLCKN-GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDL 365
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M GI + ++N A AK ++ A+ + M ++G++P+ V+Y +LI LCK
Sbjct: 366 LNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL------------------------------ 320
++D+A F++M+ G++P I + + +
Sbjct: 426 LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485
Query: 321 ------DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
++ + G + G L++S+ MG +P +Y LI K+ +
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFV 431
G PD SY L+H G+++ A+ ++ +M + P T + +L K+F
Sbjct: 546 SVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFS 605
Query: 432 ERQ 434
E +
Sbjct: 606 EAK 608
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 8/246 (3%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
N +LNG C+ + + M + G D VS++ ++ + + L L M
Sbjct: 132 INQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMM 191
Query: 235 KRMGI-ECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ C V Y+ VI+ V +L M ++G+ P+VVTY ++I LCKA
Sbjct: 192 ADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKA 251
Query: 292 RKLDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDT 347
+ D A F +M+ G+ P I TY H +L I + +EV +LE M G +P T
Sbjct: 252 QLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW-KEVVRMLEEMSAGGPKPNCCT 310
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+ + + ++ + G P ++Y ++H G L E H M
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370
Query: 408 EKQLLP 413
+ P
Sbjct: 371 ANGISP 376
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 48/253 (18%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
++S +I C+ + +L F + + G D V N +++ L G+ V +A+ L++
Sbjct: 96 TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQR 155
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQ----------------------------- 299
M E G P+ V+YN L+K LC ++ +EA +
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 300 ---------AFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPT 344
F EM+ RGI P + TY +D + E VF + M G +P
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF---QQMIDNGVKPN 272
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
DTY LI + ++ V ++ E+S G P+ +Y +L++ L NG+ EA ++
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332
Query: 405 EMKEKQLLPEPKT 417
M K + P T
Sbjct: 333 SMIGKGIKPSVTT 345
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 155/377 (41%), Gaps = 48/377 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ L K + L+D + P +++ TL I +C + A
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL---IDGHCLAGTIDEASKLLE 542
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ LL C+ + A H + ++N IL+G +
Sbjct: 543 GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG---LF 599
Query: 187 GSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ R EA+ +++ M G +D+ +++ I++ K+ + + +++F + G++ +
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+N +I AL KG +DA+ L ++ G+ NVVTY +++ L + L+E F M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719
Query: 305 LQRGISPTIRTYHAFL-------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS- 356
+ G +P + +A + DI R G + L E R + + T MLI FS
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE--RNFSVEAS--TTSMLISIFSS 775
Query: 357 ---------------------------RWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ R+ + + ++ E+ G PD +Y ++H
Sbjct: 776 DEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 835
Query: 390 LFLNGKLEEAHQYYMEM 406
LF G+ EA + Y+ M
Sbjct: 836 LFQTGRFSEAKELYLSM 852
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 46/401 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---ILIRRYCAV 116
G + Y+T++ K + D+A++ +M P +VT T+L +R+
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 117 HDVG-RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
++ IN+ + + + + +L+ LC+ V +A + C+K + N
Sbjct: 608 KELYLNMINSGTKWDIYTYNI-------ILNGLCKSNCVDEAIKMFQNLCSKGL-QLNII 659
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FNI++ G +A ++ + G+ +VV++ ++ + +L + LF
Sbjct: 660 TFNIMIGALLKG-GRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC---- 289
M++ G + ++ NA++ L + A + + ++E+ + T + LI
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEY 778
Query: 290 ------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIR 324
KAR++D+A F EML +G++P + TY+ L + +
Sbjct: 779 QHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQ 838
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
TG E L SM Q TY +++ + FK++ + G + +
Sbjct: 839 TGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 898
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +I AL G+ E+A + + L+P+ T L+ +
Sbjct: 899 FNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE 939
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 23/236 (9%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSK------ARNLHKVLRLFDQMKRMGIE 240
G A ++ +R + + S +IS +S A++L K R+ ++ +
Sbjct: 742 GDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL- 800
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ K R + DA SL + M KG+ P+VVTYN+++ L + + EA++
Sbjct: 801 ------------IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848
Query: 301 FDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ M+ I TY+ L+ + +E F + +S+ G Q T+ ++I +
Sbjct: 849 YLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLK 908
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ++ I NG PD +Y + L G LEE ++ M EK P
Sbjct: 909 GGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTM-EKSGTP 963
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK--GRLVKDA-----ISLMKSMEE 271
S + L L+LFD++ +N ++ A+++ GR + +SL M
Sbjct: 25 SGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVR 84
Query: 272 K---GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTI--RTYHAFLDIIR 324
VAPN TY+ LI C+ L+ AF +L+ G + + + + D R
Sbjct: 85 DCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKR 144
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN---GNGPDRS 381
GE + LL+ M ++GC P +Y +L+K ++ ++ + ++++ P+
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
SY+ +I+ F G++++ + ++EM ++ + P+ T + D Q +R
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDR 256
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 150/302 (49%), Gaps = 10/302 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++SA CR N A L+ K + P N ++ ++ G G +A+ + E
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKP-NLITYTTLVVGLLEA-GVVEKAKYLLNE 669
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M+ G +++ ++ S +R+ + +L + + M G+ D VYN ++H L +
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGM 729
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A ++ M +G+AP+ +T+N+LI CK+ LD A + +ML +G+SP I T++
Sbjct: 730 TRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNT 789
Query: 319 FLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L + R GE + E M+KMG +P N TY +L+ +++ +++ E+
Sbjct: 790 LLGGLESAGRIGEADTVICE-MKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 848
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVER 433
G P S+Y +LI G + +A + + EMK + +L T D LL WS + E
Sbjct: 849 GFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEV 908
Query: 434 QI 435
+I
Sbjct: 909 RI 910
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 162/363 (44%), Gaps = 10/363 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y T I L KV++ + + L+ EM LV T++ + + + +
Sbjct: 324 GVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEA 383
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNI 177
+ + V + L+ A CR N+ AE ++ K V P N +F+
Sbjct: 384 KDVLRHALSDNITPNCV---TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP-NVVTFSS 439
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
ILNG G +A +M GI +VV++ +I + K + L ++ M
Sbjct: 440 ILNGLVKR-GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHE 498
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+E + + +++++ L K +++A +L K M E+G+ + V Y +L+ L K + A
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAA 558
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ E+++R +SP Y+ F++ + R G+ E L+ MR G +P TY +I
Sbjct: 559 LKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISA 618
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R K+ NE+ + P+ +YT L+ L G +E+A EM P
Sbjct: 619 QCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPT 678
Query: 415 PKT 417
P T
Sbjct: 679 PLT 681
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 41/348 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++A D AW + + M+ PS+VT TL I YC + + A +
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTL---IGEYCKMKRIEEAFTLYE 283
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
R + L+ LCR G
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRD-----------------------------------G 308
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA ++ EM + G+ + V++ I +K + +++ L L +M G+ D +Y
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
V+ L K +++A +++ + PN VTY L+ C+A +D A Q +M ++
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428
Query: 308 GISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
+SP + T+ + L+ +++ G + G + M+ G P TY LI F + +
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
V+ ++ G + +L++ L NG +EEA + +M E+ LL
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLL 536
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 171/393 (43%), Gaps = 22/393 (5%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
+G Q A T Y+ +A L + A ++ EM VT T L+ + R
Sbjct: 107 SGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTG 166
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
V + A+ R +G+ + L+ C+ +++ A + V T+
Sbjct: 167 LVGEAA-ALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAV------VERMTTQG 219
Query: 175 FNIILNGWCNIIGS---SREAERVWMEMSQR----GICYDVVSFSCIISCYSKARNLHKV 227
++ + G+ ++ S +A+ W E+++R G+ VV+ + +I Y K + + +
Sbjct: 220 LSLDVVGYNTLVAGFFYSGDADAAW-EVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEA 278
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L++ M R G+ D +A++ L + +A +L + M++ GVAPN VTY + I
Sbjct: 279 FTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDS 338
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-----EEVFGLLESMRKMGCQ 342
L K ++++E+ EM+ RG++ + Y +D R G EE +L
Sbjct: 339 LAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD--RLGKEGKIEEAKDVLRHALSDNIT 396
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY +L+ R ++ ++ E P+ +++++++ L G + +A Y
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+MK+ + P T L D + Q E +
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 50/362 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + +G Y+TMI+ + A L++EM+ P+L+T TL++ +
Sbjct: 596 FLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLL 655
Query: 112 RYCAVHDVGRAINAFYA---------YKRFKFAVG-----------------------IE 139
V +N + Y+R A I
Sbjct: 656 EAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADIT 715
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERV 195
+ L+ LC + + A ++ + + P +T +FN ++ G C SS A
Sbjct: 716 VYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP-DTITFNALILGHCK---SSHLDNAFAT 771
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ +M +G+ ++ +F+ ++ A + + + +MK+MG+E + Y+ ++ AK
Sbjct: 772 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAK 831
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+A+ L M KG P TYNSLI KA +++A++ F EM +RG+ T T
Sbjct: 832 KSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSST 891
Query: 316 YHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR----W---RQFGNVF 365
Y L+ +R G EV LL+ M+++G +P+ T + + FS+ W R +F
Sbjct: 892 YDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLF 951
Query: 366 KV 367
KV
Sbjct: 952 KV 953
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 179/407 (43%), Gaps = 64/407 (15%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWE---------AAFTFFLWAGKQSGYAHSTREYHTMI 72
++E ++VS LV EVL + + A+ FF+W+G+Q + H+ YH ++
Sbjct: 99 LDELNVRVSGLLVREVLVGILRNLSYDNKTRCARLAYRFFVWSGEQDCFRHTVNSYHLLM 158
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAFYAY 129
I + ++ W L+DEM + P+ T +T +LI C+ + G +A+ F
Sbjct: 159 KIFAECGEYKAMWRLVDEMV-QDGFPT--TARTFNLLI---CSCGEAGLAKQAVVQFMKS 212
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
K F + PF S+N ILN +
Sbjct: 213 KTFNYR---------------------------------PFK-HSYNAILNSLLG-VKQY 237
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
+ E V+ +M + G DV++++ ++ + + + RLFD+M R G+ D YN +
Sbjct: 238 KLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNIL 297
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+H L KG A++ + M+E G+ +V+ Y +LI L +A L+ + DEM++ G
Sbjct: 298 LHILGKGNKPLAALTTLNHMKEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 357
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFG 362
P + Y ++ TG V G LE ++M G P TY +I+ +F
Sbjct: 358 RPDVVCY----TVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFR 413
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ E+ G P+ Y+ L+ L GKL EA + +M +K
Sbjct: 414 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKK 460
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 5/313 (1%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+D F S+++++ + G + R+ EM Q G +F+ +I +A
Sbjct: 144 QDCFRHTVNSYHLLMKIFAEC-GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 202
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + F + K + YNA++++L + K + + M E G +P+V+TYN L
Sbjct: 203 KQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNIL 262
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES---MRKMGC 341
+ + K+D + FDEM + G+SP TY+ L I+ G + L + M+++G
Sbjct: 263 LWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGI 322
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ Y LI SR +E+ + G PD YT +I ++G+LE+A +
Sbjct: 323 DLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKE 382
Query: 402 YYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDR 460
+ EM + LP T + +++ +F E + N V S R
Sbjct: 383 MFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR 442
Query: 461 EFLQQPETRRVVR 473
+ + E R+V+R
Sbjct: 443 KAGKLSEARKVIR 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM + G DVV ++ +I+ Y + L K +F +M G + YN++I L
Sbjct: 351 EMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAG 410
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
++A L+K ME +G PN V Y++L+ L KA KL EAR+ +M+++G
Sbjct: 411 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKG 461
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 31/374 (8%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF FF S + +++ L K++ + + L ++MR P T L
Sbjct: 80 AFQFFHLM-MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT---LN 135
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------M 161
IL+ C V+ VG + R + I + L+ LC + A L +
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL 195
Query: 162 FCNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMSQRGICYD--VVSFSCIIS 216
C + + T ++ G C NI + + + + + S GI + V+S+S II
Sbjct: 196 GCTPNAITYGT-----LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K R + LF++MK G+ Y +++ AK L M +GV P
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAK--------RLFNEMVNQGVQP 302
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLL 333
NVVT+N LI LCK K+ EA+ + M+QRGI P + TY++ ++ ++ L
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
SM GC+P Y +LI + + + K++N + + G PD +Y AL+ LF
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 422
Query: 394 GKLEEAHQYYMEMK 407
GK+ +A + + MK
Sbjct: 423 GKVGDAKKLFGVMK 436
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 165/349 (47%), Gaps = 18/349 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K R+ D A L +EM+ P++++ +L+ + V + +
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQP-- 302
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ LC+ V +A+ L+ + + P N ++N ++ G+C +
Sbjct: 303 ---------NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP-NLLTYNSLIEGFC-L 351
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G A +++ M +G DV+ ++ +I+ Y K + + ++L++ M ++G D K
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y A++ L +G V DA L M+ G+ ++ Y + LCK L EA + F+++
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471
Query: 306 QRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
I I ++ +D + + G E + L E + + QP TY ++I +F R Q
Sbjct: 472 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 531
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
++ ++ +NG PD+ +Y LI F + KLE+ + M ++ +
Sbjct: 532 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 580
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 182/429 (42%), Gaps = 51/429 (11%)
Query: 50 TFFLWAG-KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI 108
F+L+ + SG + + ++ L V + A++ + P +VT TL
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTL-- 172
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNK 165
I+ C H + +A F ++ + L+ LCR N+ A L M +
Sbjct: 173 -IKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231
Query: 166 DVFPFNTK----SFNIILNGWC----------------------NIIGSS----REAERV 195
++ N K S++II++ C +I + EA+R+
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRL 291
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM +G+ +VV+F+ +I K + + L + M + GI + YN++I
Sbjct: 292 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 351
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ A L SM KG P+V+ Y LI CK K++EA + ++ MLQ G P ++T
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411
Query: 316 YHAFLDIIRTGEEV------FGLLESMRKMGCQPTNDTYI--MLIKKFSRWRQFGNVFKV 367
Y A L + G +V FG+++ G D YI + + + ++
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPG-----DLYIYGIFLNGLCKNGCLFEAMEL 466
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSY 426
+N++ D + LI L GKLE A + + ++ +++L P+ T + ++ ++
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526
Query: 427 NKQFVERQI 435
Q V+ I
Sbjct: 527 GGQVVKANI 535
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+++I V ++A L M P ++ +LI YC
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT---VLINGYCKTS 388
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
V A+ + + ++ + LL+ L + V DA+ L K P + +
Sbjct: 389 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 448
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I LNG C G EA ++ ++ I D+ F+C+I KA L LF+++ +
Sbjct: 449 IFLNGLCKN-GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
++ D YN +IH +G V A L + ME+ G P+ +TY +LI+ +++KL++
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 567
Query: 297 ARQAFDEMLQRGIS 310
+ M+QR +S
Sbjct: 568 VVELLHMMVQRDVS 581
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 25/279 (8%)
Query: 149 CRYKNVQDAE-----HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
C+ N+ + HLM + P + SF +L+G I S + ++ +M G
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLS--SFTHLLSGLAKIKHYS-QVFYLYNQMRLSG 126
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
I D + + +++C + + L + + R G D Y +I L + A
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR----GIS--PTIRTYH 317
L M++ G PN +TY +L+K LC+ + A + EML GI+ P + +Y
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246
Query: 318 AFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + R +E L E M+ G PT +Y L+ W + +F NE+
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-----WEEAKRLF---NEMVNQ 298
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
G P+ ++ LI L GK+ EA M ++ ++P
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF+ ++S +K ++ +V L++QM+ GI D N +++ L V + +++M +
Sbjct: 98 SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEE 328
+G P++VTY +LIK LC ++ +A F M + G +P TY + + RTG
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217
Query: 329 VFGLL--------ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
L S+ + +P +Y ++I + R+ ++ E+ G P
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
SYT+L+ EEA + + EM + + P T +L D
Sbjct: 278 ISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLID 312
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 163/359 (45%), Gaps = 18/359 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I K+ A L+ + P VT +L I CA DV RA+ F
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL---INGLCAEGDVERALELFN 352
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
+ I + L+ LC + A +M C+ D+ +++NI++NG
Sbjct: 353 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI-----QTYNIVING 407
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + G+ +A V + +G DV +F+ +I Y K L L+L ++M GI
Sbjct: 408 LCKM-GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN+V++ L K V + + M KG PN +TYN LI+ C++ K++EA +
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+M Q G+ P +++ + R G E + L + + + G T DT+ LI FS
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K+++E+ G+ D +Y LI ++ A+ + +EM +K +P T
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 645
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 145/309 (46%), Gaps = 42/309 (13%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ LC+ Q+A H + N+ P + ++N I++G+C I +EA + +
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP-DDFTYNTIIDGYCKI-SMVQEATELLKD 318
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+G D V++ +I+ ++ + L LF++ + GI+ D VYN+++ L L
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA--------------------------- 291
+ A+ +M M E+G P++ TYN +I LCK
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438
Query: 292 --------RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---G 340
KLD A Q + M + GI+P TY++ L+ + +V + E+ ++M G
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
C P TY +LI+ F R + KV ++S+ G PD S+ LI+ NG LE A+
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558
Query: 401 QYYMEMKEK 409
+ +++EK
Sbjct: 559 LLFQKLEEK 567
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
G + ++ L + + DA L + VFP N +FN +L+ C G EA
Sbjct: 153 GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP-NLAAFNKVLHALCKR-GDVLEAGL 210
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ ++ QRG+ ++ +++ I +A L + +RL D M+ + D YN +I L
Sbjct: 211 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLC 269
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + ++A+ ++ M +G P+ TYN++I CK + EA + + + +G P
Sbjct: 270 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 329
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY + ++ + G E L + G +P Y L+K + +V NE+
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+E G PD +Y +I+ L G + +A + K LP+ T L D
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 441
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSAL--CRYKNVQDAEHLMFCNKDV 167
IR Y + A++AF F + ++ AL Y + ++ V
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P + + I L +C + A R+ + RG V++ ++ + H
Sbjct: 120 SP-DLHTHTIRLRSFC-LTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDA 173
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+LFDQM + + +N V+HAL K V +A L+ + ++G++ N+ TYN I+
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
LC+A +L EA + D M + P + TY+ + + +E L M GC P
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+ TY +I + + ++ + G PD+ +Y +LI+ L G +E A + +
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 352
Query: 405 EMKEKQLLPE 414
E + K + P+
Sbjct: 353 EAQAKGIKPD 362
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ +I L K+ A ++++ P + T TL I YC
Sbjct: 391 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL---IDGYCKRL 447
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A+ + A + +L+ LC+ V + K P N ++
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP-NPITY 506
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++ +C EA +V ++MSQ G+ D VSF+ +I + + +L LF +++
Sbjct: 507 NILIENFCRS-NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G +N +I A + + A + M KG + TY LI CK +D
Sbjct: 566 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 625
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQP 343
A EM+++G P++ T+ ++ + VF G++ M K+G P
Sbjct: 626 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y A I A A+ ++DA+ + M+ P YN+++ L A D+A + + M
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114
Query: 305 LQRGISPTIRTY 316
L G+SP + T+
Sbjct: 115 LAAGVSPDLHTH 126
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 28/371 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I L + K + A+ L EM+ P + T ILI +C +
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT---ILIDSFCKAGLI 339
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFN 176
+A + F + + + + LL A + K + A + N+ + P NT +++
Sbjct: 340 EQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF--NRMIDAGCPPNTITYS 397
Query: 177 IILNGWCNIIGSSREAERVWMEM----------------SQRGICYDVVSFSCIISCYSK 220
+++G C G ++A V+ ++ I +VV++ +I K
Sbjct: 398 ALVDGLCKA-GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + L D M G E + +Y+A+I K + +A + M + G P V T
Sbjct: 457 AHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMR 337
Y SLI + K R+LD A + +M++ +P + TY A +D + R GE + LL M
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ GC P TY LI + + +++ ++S G P+ +Y LI+ G L+
Sbjct: 577 EKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLD 636
Query: 398 EAHQYYMEMKE 408
EAH EMK+
Sbjct: 637 EAHSLLSEMKQ 647
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 178/409 (43%), Gaps = 56/409 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL------IRRY 113
G + + Y ++ K ++ A + + M P+ +T L+ I++
Sbjct: 353 GCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKA 412
Query: 114 CAVHD--VGRAINA---FYAYKRF--KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCN 164
C V+ +G + N FY + A + + L+ LC+ V DA+ L+ +
Sbjct: 413 CEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLS 472
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
P N ++ +++G+C + G A+ V++ MS+ G V +++ +I K R L
Sbjct: 473 NGCEP-NHIIYDALIDGFCKV-GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRL 530
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+++ QM + Y A+I L + + A+ L+ MEEKG +PNVVTY +L
Sbjct: 531 DLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTAL 590
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----------------------- 321
I L K+ K+D + Q F +M +G +P TY ++
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 650
Query: 322 ---------IIRTGEEVF----GLLESMRKMGCQPTNDTYIMLIKKFS---RWRQFGNVF 365
+++ + F GLLE + G P Y +LI FS R + +
Sbjct: 651 PKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELH 710
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
K E+S + N + YT+LI AL L +LE+A + Y E+ K ++PE
Sbjct: 711 KEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPE 759
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 133/275 (48%), Gaps = 20/275 (7%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F +T +++ ++ C + +A ++ EM G+ DV +++ +I + KA + +
Sbjct: 284 FVPDTSTYSKVITFLCEAM-KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
FD+M+ +G + Y A++HA K + + A + M + G PN +TY++L+
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402
Query: 288 LCKARKLDEARQAFDEML----------------QRGISPTIRTYHAFLDIIRTGEEVFG 331
LCKA ++ +A + + +++ I+P + TY A +D + +V
Sbjct: 403 LCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVD 462
Query: 332 ---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
LL++M GC+P + Y LI F + + N +V+ +S+ G P +YT+LI
Sbjct: 463 AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLID 522
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
A+F + +L+ A + +M E P T + D
Sbjct: 523 AMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 144/320 (45%), Gaps = 41/320 (12%)
Query: 134 FAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNII 186
F + +++ LC V+ A L+F N DV+ ++ I+++ +C
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKA-FLLFQEMKSVGVNPDVY-----TYTILIDSFCK-- 335
Query: 187 GSSREAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
E R W EM G +VV+++ ++ Y KA+ L + +F++M G +
Sbjct: 336 AGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTIT 395
Query: 246 YNAVIHALAKGRLVKDAIS----LMKSMEEKG------------VAPNVVTYNSLIKPLC 289
Y+A++ L K ++ A L+ + + G +APNVVTY +LI LC
Sbjct: 396 YSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC 455
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQP 343
KA K+ +A++ D ML G P Y A +D I +EVF M K G P
Sbjct: 456 KAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF---LRMSKCGYLP 512
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
T TY LI + R+ KV +++ E+ P+ +YTA+I L G+ ++A +
Sbjct: 513 TVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLL 572
Query: 404 MEMKEKQLLPEPKTDELLQD 423
M+EK P T L D
Sbjct: 573 SMMEEKGCSPNVVTYTALID 592
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 44/261 (16%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+VV++ +++ + K + L R+ + M + G + ++N+++H+ R A L+
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200
Query: 267 KSMEEKGVAPNVVTYNSLI----------------------------------------- 285
K M + G P V YN I
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYH---AFLDIIRTGEEVFGLLESMRKMGCQ 342
+ LC K D A Q M+ +G P TY FL E+ F L + M+ +G
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY +LI F + ++E+ G + +YTAL+HA +L +A
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
+ M + P T L D
Sbjct: 381 FNRMIDAGCPPNTITYSALVD 401
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 26/275 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY + Y ++I + K R+ D A ++ +M P++VT + I C +
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAM---IDGLCRIG 563
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSF 175
+ +A+ + + + + L+ L + V + L K P N ++
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP-NYVTY 622
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQ-------RGICYDVVSFSCIISCYSKARNLHKVL 228
+++N C G EA + EM Q +G C V FS + L
Sbjct: 623 RVLINHCCAA-GLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS---------KKFIASL 672
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT---YNSLI 285
L ++++ G VY +I +K +++A+ L K M E + N+ + Y SLI
Sbjct: 673 GLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLI 732
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+ LC A +L++A + + E+ ++G+ P + + +
Sbjct: 733 QALCLASQLEKAFELYSEITRKGVVPELSVFVCLI 767
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 49/285 (17%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
RV EMS+ G C D + C K L + ++R + D + +I L
Sbjct: 61 RVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVLCTQMISGL 117
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ L +AIS + M PNVVTY +L+ K ++L ++ + M++ G +P
Sbjct: 118 MEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNP 177
Query: 314 RTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI----------------- 352
+ H++ + R + LL+ M GC P Y + I
Sbjct: 178 SLFNSLVHSYCN-ARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236
Query: 353 --------------------KKFSR----WRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
F+R +F F++ + G PD S+Y+ +I
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
L K+E+A + EMK + P+ T +L D +E+
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQ 341
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 14/164 (8%)
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++K G YNA++ LA + + K M E G + T + LCK
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 293 KLDEA-----RQAF--DEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
+ +A R+ F D +L + + F +E L MR C P
Sbjct: 90 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLF-------DEAISFLHRMRCNSCIPNV 142
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
TY L+ F + +Q G ++ N + + G P+ S + +L+H+
Sbjct: 143 VTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHS 186
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 175/397 (44%), Gaps = 48/397 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ SG + Y +I K + D A + +EM+ P + + ILI +C
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYS---ILIDGFCRK 398
Query: 117 HDVGRAI--------NAFYA------------YKRFKFAVGIEDFQGLLSALCRYKNVQD 156
D+ AI N F YK +FA +++F+ ++ L + +
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR-IMQKLGMWPDTIA 457
Query: 157 AEHLM--FCNKDVFP---------------FNTKSFNIILNGWCNIIGSSRE-AERVWME 198
H++ +C K F FN S+N ++ C GS E A ++
Sbjct: 458 CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICR--GSVPEKALQLLPV 515
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +R + DVV++S +ISC++K N K + LF +M ++GI + K Y +I+
Sbjct: 516 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 575
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A L K M+E V P+ + Y SL+ C ++ AR FDEM + G SP + TY
Sbjct: 576 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 635
Query: 319 FLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F++ + + L E M++ G P Y MLI F + +++E+ + G
Sbjct: 636 FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695
Query: 376 N-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
P+ YT LI++ K ++A + Y EM+ K L
Sbjct: 696 RCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 164/370 (44%), Gaps = 24/370 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG Y +I + + D A + EMR P++ + ILI +C
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYS---ILIDGFCKE 363
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
V +A+ F K + + L+ CR ++ A M N F+
Sbjct: 364 GRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN----FSPS 419
Query: 174 SFNIILNGWCNIIGS---SREAERVWME---MSQRGICYDVVSFSCIISCYSKARNLHKV 227
+FN +C++I S++ E M + G+ D ++ + I+S Y + + +K
Sbjct: 420 AFN-----YCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKA 474
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L ++ + G+ + YN IH + +G + + A+ L+ M ++ V P+VV Y++LI
Sbjct: 475 LALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISC 534
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
K ++A F +M + GI+ ++TY +++ + + + L + M++ P
Sbjct: 535 FAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPD 594
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
Y L+ F + +++E+S G P+ +YT I+ K +AH+ Y
Sbjct: 595 QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYE 654
Query: 405 EMKEKQLLPE 414
+MKE+ + P+
Sbjct: 655 KMKERGVYPD 664
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
Query: 171 NTKSFNIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
N ++ I++N +C +G S R A + ++ G +VV++ I K
Sbjct: 205 NIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVA 264
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RL + R + +NAVI+ L +G ++ +A + K M+ G+ P+V +Y+ LI
Sbjct: 265 WRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDG 324
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
C+ ++D+A + F EM GI P I +Y +D + G ++ + E M+ G P
Sbjct: 325 FCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPD 384
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+Y +LI F R + K W E++ N P +Y +LI + + + A + +
Sbjct: 385 VYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Query: 405 EMKEKQLLPE 414
M++ + P+
Sbjct: 445 IMQKLGMWPD 454
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 10/342 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
D A + EM+ P + + ILI +C V +A F + I
Sbjct: 296 LDEASEVFKEMKNSGILPDVYSYS---ILIDGFCRKGRVDQASEVFKEMRNSGILPNIYS 352
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ C+ V A + N + P + S++I+++G+C G A + W E
Sbjct: 353 YSILIDGFCKEGRVDKALEVFEEMKNSGILP-DVYSYSILIDGFCRK-GDMDSAIKFWEE 410
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M+ ++ +I Y K++ L+ F M+++G+ D N ++ +
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A++L + +E GV N +YN I +C+ ++A Q ML+R + P + Y
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530
Query: 319 FLDIIR---TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ E+ L M K+G TY +LI F + ++++ + E+
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD+ +YT+L+ G++ A + EM + P T
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
V+P + ++ ++ G+CN G A ++ EMS+ G +VV+++C I+ Y K ++
Sbjct: 591 VYP-DQIAYTSLVAGFCNT-GEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQ 648
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLI 285
+L+++MK G+ D+ +Y +I A + A +L M+++G PNVV Y LI
Sbjct: 649 AHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLI 708
Query: 286 KPLCKARKLDEARQAFDEMLQRGIS 310
K K D+A + ++EM +G+S
Sbjct: 709 NSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 16/261 (6%)
Query: 176 NIILNGWCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
N++ + + S+ A V++ GI +++S + ++ C + + V LF+
Sbjct: 136 NVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFE 195
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRL----VKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ + G + Y +++ +G ++ A ++ + G PNVVTY + IK L
Sbjct: 196 VLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGL 255
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQ 342
CK A + + ++ ++A + I+ EVF + M+ G
Sbjct: 256 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVF---KEMKNSGIL 312
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P +Y +LI F R + +V+ E+ +G P+ SY+ LI G++++A +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
+ EMK +LP+ + +L D
Sbjct: 373 FEEMKNSGILPDVYSYSILID 393
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ +E V++ +I A +++ A + ++ G+ N+++ N L+K L + ++D
Sbjct: 130 LDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDG 189
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI----------IRTGEEVFGLLESMRKMGCQPTND 346
R F+ +++ G P I TY ++ IR E+ G + G P
Sbjct: 190 VRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILG---KIYMSGETPNVV 246
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY IK + FG +++ + + + A+I+ L G L+EA + + EM
Sbjct: 247 TYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM 306
Query: 407 KEKQLLPEPKTDELLQD 423
K +LP+ + +L D
Sbjct: 307 KNSGILPDVYSYSILID 323
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 41/377 (10%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E+ ++ + K++ + T +L +M P + TL I+I +C ++
Sbjct: 58 EFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDV---YTLTIVINSFCHLN--------- 105
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
R FA+ + L+ + + + D T +F ++ G C ++
Sbjct: 106 ----RVDFALSV------LAKILKLGHQPD---------------TATFTTLVRGLC-VV 139
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA V+ +M G +VV++ +++ K R L + L LF +M GI D Y
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++IHAL K +L+ M + + PNVV+ N ++ LCK K+ EA D M+Q
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
Query: 307 RGISPTIRTYHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G+ P + TY A +D +R+ +E + + M + GC +Y LI + + ++
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++ E+ P+ +Y+ LIH L G+L++A + EM +P T +L D
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379
Query: 424 WSYNKQFVERQIASLKA 440
+ + +A LKA
Sbjct: 380 YLCKNHRLAEAMALLKA 396
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 163/359 (45%), Gaps = 12/359 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T + T++ L V K A + D+M G P++VT TL+ C +
Sbjct: 121 GHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLM---NGLCKDRQL 177
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFN 176
A+N F + I + L+ ALC +K+V + M +K + P N S N
Sbjct: 178 TEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK-IMP-NVVSLN 235
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+++ C G EA V M Q G+ DVV+++ ++ + + + +++FD M R
Sbjct: 236 IVVDALCK-EGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G C+ YN +I+ K + + A+ L + M + + PN +TY++LI LC +L +
Sbjct: 295 NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQD 354
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIK 353
A F+EM+ G P + TY LD + E LL+++ P Y + I
Sbjct: 355 AIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAID 414
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
R +++ ++ G PD ++ +I L G L+EA + + EM E L
Sbjct: 415 GMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T++ L K R+ A L EM P + T +L+ + C V
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+N + K + ++ ALC+ V +A + M V P + ++
Sbjct: 216 TTLLNEMV---KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP-DVVTYAA 271
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C + EA +V+ M + G +VVS++ +I+ Y K + + K + LF++M R
Sbjct: 272 LMDGHC-LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQ 330
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + Y+ +IH L ++DAI+L M G PN+VTY+ L+ LCK +L EA
Sbjct: 331 ELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEA 390
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ + P ++ Y+ +D + R G E L ++ G QP T+ ++I+
Sbjct: 391 MALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRG 450
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ K++ E+ ENG + +Y + L N K A Q EM + +
Sbjct: 451 LCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSAD 510
Query: 415 PKTDELL 421
T LL
Sbjct: 511 VSTTALL 517
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ F+ +++ +K ++ VL L +M GI D VI++ V A+S++
Sbjct: 56 IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---R 324
+ + G P+ T+ +L++ LC K+ EA FD+M+ G P + TY ++ + R
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR 175
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E L M G P TY LI ++ +V + NE+ ++ P+ S
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++ AL GK+ EAH M + + P+ T L D
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 7/233 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + Y+T+I K+++ D A L +EM E P+ +T TL I C V
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTL---IHGLCHVG 350
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSF 175
+ AI F + + LL LC+ + +A L+ ++ P + + +
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDP-DVQVY 409
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI ++G C G A ++ ++ RG+ DV + + +I K L + +LF +M
Sbjct: 410 NIAIDGMCRA-GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMD 468
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
G + YN + L + AI L++ M +G + +V T L+K L
Sbjct: 469 ENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 64/432 (14%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ND AA WA KQ + ++ Y ++ LGKV F++ ++ EM+G + +
Sbjct: 64 QNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQ---I 120
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALCRYKNVQDAE- 158
+ LLI I Y A ++ I +F + ++ + LL+ L ++ E
Sbjct: 121 DRGVLLIFIDSY-AKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVEN 179
Query: 159 -HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
H +K + P + +FNI++ C R A V EMS G+ D +F+ ++
Sbjct: 180 VHSTMVSKGIKP-DVSTFNILIKALCK-AHQIRPAILVMEEMSSYGLVPDEKTFTTLMQG 237
Query: 218 YSKARNLHKVLR------------------------------------------------ 229
+ + N+ R
Sbjct: 238 FIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTM 297
Query: 230 ---LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L+++MK G + D YN +I +L +++A+ L++ ME G A NV+TYN+LI
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLID 357
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
CK +K++EA + FD+M +G+S TY+ +D + R +E L++ M G +P
Sbjct: 358 GFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY ++ F R + ++ NG PD +Y LI L G++E A +
Sbjct: 418 DKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477
Query: 404 MEMKEKQLLPEP 415
++ K ++ P
Sbjct: 478 RSIQLKGMVLTP 489
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D F ++N++++ C G +EA + EM G +V++++ +I + K +
Sbjct: 310 CQPDEF-----TYNMLIDSLC-YRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + +FDQM+ G+ + YN +I L K R V++A LM M +G+ P+ TYN
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM 339
S++ C+ + +A M G P I TY + + + G E LL S++
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF-LNGKLEE 398
G T Y +I+ + ++ +++ E+ E GN PD +Y + L G + E
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGE 543
Query: 399 AHQYYMEMKEKQLLPE 414
A + +EM EK LPE
Sbjct: 544 AVDFVIEMIEKGFLPE 559
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 7/236 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV- 245
G A ++ EM +G D +++ +I L + L L +M+ G C R V
Sbjct: 293 GKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISG--CARNVI 350
Query: 246 -YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I K + +++A + ME +G++ N VTYN+LI LCK+R++ EA Q D+M
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410
Query: 305 LQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G+ P TY++ L R G+ + ++++M GC+P TY LI + +
Sbjct: 411 IMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRV 470
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ I G +Y +I ALF + +EA + + EM+EK P+ T
Sbjct: 471 EVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 34 VSEVLSWV---RNDWEAAFTFFLW-AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALID 89
+ E LS++ N+ + L+ K G Y+ +I L K A L+
Sbjct: 279 IEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLR 338
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
EM +++T TL I +C + A F + + + L+ LC
Sbjct: 339 EMEISGCARNVITYNTL---IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLC 395
Query: 150 RYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
+ + VQ+A LM + + P + ++N +L +C G ++A + M+ G D
Sbjct: 396 KSRRVQEAAQLMDQMIMEGLKP-DKFTYNSMLTYFCRE-GDIQKAADIVQTMTSNGCEPD 453
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+V++ +I KA + RL ++ G+ YN VI AL K + K+A+ L +
Sbjct: 454 IVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFR 513
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKA-RKLDEARQAFDEMLQRGISPTIRTYH 317
MEEKG P+ TY + + L + + EA EM+++G P +++
Sbjct: 514 EMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFY 564
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG A + Y+T+I K +K + A + D+M + VT TL+ + + V +
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQE 402
Query: 119 VGRAINAFY--AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+ ++ K KF + +L+ CR ++Q A ++ C D+ +
Sbjct: 403 AAQLMDQMIMEGLKPDKFT-----YNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
T ++ G C G A R+ + +G+ +++ +I K + + +RL
Sbjct: 458 GT-----LIGGLCKA-GRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511
Query: 231 FDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F +M+ G D Y V L+ G + +A+ + M EKG P ++ L + LC
Sbjct: 512 FREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Query: 290 KARKLDEARQAFDEMLQRG 308
D + D ++++
Sbjct: 572 SLSMEDTLIKLVDLVMEKA 590
>gi|449437886|ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 171/401 (42%), Gaps = 43/401 (10%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
++ +E C ++ S ELV E+L D AAF FF W GKQ GY H+T Y+ I I G
Sbjct: 636 IKKALENCSVEFSPELVIEILRKCSLDGCAAFNFFAWVGKQPGYNHTTETYNMAIKIAGL 695
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+ F +L EMR G S +T T I+I +Y A+ ++ K
Sbjct: 696 GKDFKHMRSLFYEMR--RRGCS-ITPYTWTIMIMQYARAGLTEIALKSYEEMKEINIKPN 752
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
++ L+ +LC K + EA ++
Sbjct: 753 ANTYKYLIMSLCESKRRK---------------------------------VDEAITLFQ 779
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM D + C K L + D ++++G Y+ I AL + R
Sbjct: 780 EMIHSKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIPL-TYSLYIRALCRAR 838
Query: 258 LVKDAISLMKSM--EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +A++L++ + +E+ + + Y SL+ L + + +EA + M Q GI+PT+
Sbjct: 839 KLDEALTLLEEVVGDERSKLDSYI-YGSLVYGLLQTGRTEEALAKMNSMKQVGINPTVHV 897
Query: 316 YHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y +F+ ++ LE + KM GC+P+ TY ++ + + +KV+N +
Sbjct: 898 YTSFIVYSFKEKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNYMK 957
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ G PD +YT LI L G+ EEA + +M + P
Sbjct: 958 KYGPSPDFKAYTMLISCLCKAGRSEEALEIISDMLNNGIAP 998
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 166/402 (41%), Gaps = 45/402 (11%)
Query: 18 MRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
M ++ + SSE+V +VL A FF W + G+ +T ++T+++I G+
Sbjct: 146 MEERLGNLDVMFSSEIVEKVLKRCFKFPHLALGFFNWVKSRDGFQCTTNVFNTVLSIAGE 205
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY------------------------ 113
R F L++EM E+ L +T ILI Y
Sbjct: 206 ARDFKLIDKLLEEM---ESYSLLKDIKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPD 262
Query: 114 --------CAVHDVGRAINAFYAYKRF-KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
C++ G+ A Y+ K + + D + L D ++
Sbjct: 263 GVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKMLLSSLAGSGDTASVLDIA 322
Query: 165 KDVFP-FNTKS---FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
KD+ FN + ++ IL +C I +EA +++ +GI D F +I +
Sbjct: 323 KDMVALFNVQERDVYHYILKSFC-ISRRIKEALEFIRDLNSKGIVLDSEYFEILIGGLCR 381
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + L L + +KR G + D K+Y +I+ + V A+ L ++M+E G P T
Sbjct: 382 ANRIEDALELINIIKRKG-DVDGKIYGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTST 440
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGIS-PTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
Y L++ L + ++ + + EML++GI T+ + +R + R M
Sbjct: 441 YTQLMQHLFSLAEYEKGFELYKEMLEKGIELDTVAIMTVVVGNVRQN-RITEAWNVFRTM 499
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE-NGNGPDR 380
+PT + + I++ R + + KV NE+ E N PD+
Sbjct: 500 ENKPTWKSCSVFIRELFRISRTDEIVKVLNEMQELNIVIPDK 541
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 40/267 (14%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL- 253
++ EM +RG +++ +I Y++A L+ +++MK + I+ + Y +I +L
Sbjct: 705 LFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSYEEMKEINIKPNANTYKYLIMSLC 764
Query: 254 -AKGRLVKDAISLMKSMEEKGVAPN----------------------------------V 278
+K R V +AI+L + M P+
Sbjct: 765 ESKRRKVDEAITLFQEMIHSKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLRKVGFSIP 824
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL--DIIRTG--EEVFGLLE 334
+TY+ I+ LC+ARKLDEA +E++ S + L +++TG EE +
Sbjct: 825 LTYSLYIRALCRARKLDEALTLLEEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMN 884
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
SM+++G PT Y I + +Q ++ ++ + G P ++Y+A++H G
Sbjct: 885 SMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMG 944
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+ EA + + MK+ P+ K +L
Sbjct: 945 KVCEAWKVFNYMKKYGPSPDFKAYTML 971
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F+ ++S +AR+ + +L ++M+ + D K + +I +L ++ + M+
Sbjct: 196 FNTVLSIAGEARDFKLIDKLLEEMESYSLLKDIKTWTILISLYGNAKLTGKSLMVYSKMK 255
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL--DIIRTGE- 327
E G P+ V Y +LI L A K + A + + EM ++GIS L + +G+
Sbjct: 256 ESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDMKMCKMLLSSLAGSGDT 315
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
V + + M + D Y ++K F R+ + +++ G D + L
Sbjct: 316 ASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRDLNSKGIVLDSEYFEIL 375
Query: 387 IHALFLNGKLEEAHQYYMEMKEK 409
I L ++E+A + +K K
Sbjct: 376 IGGLCRANRIEDALELINIIKRK 398
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+R A + +M Q G + ++S I+ Y + + ++F+ MK+ G D K Y
Sbjct: 911 TRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNYMKKYGPSPDFKAYTM 970
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+I L K ++A+ ++ M G+AP+ + + ++I L + K AR + L
Sbjct: 971 LISCLCKAGRSEEALEIISDMLNNGIAPSSINFRTVIFGLNREGKHVLARDVLQQKL 1027
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +T T + C VG A+ + + + +++ LC+ +++A
Sbjct: 192 PDQITYNTF---VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCI 214
+ ++ ++ P + +FN ++ C G+ EA + +++ +G+ DV +F+ +
Sbjct: 249 KGILNQMVDRGCLP-DITTFNTLIAALCT--GNRLEEALDLARQVTVKGVSPDVYTFNIL 305
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKG 273
I+ K + H LRLF++MK G D YN +I L G+L K A+ L+K ME G
Sbjct: 306 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK-ALDLLKDMESTG 364
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ +TYN++I LCK +++EA + FD+M +GIS T++ +D + + ++ F
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L+ M G QP N TY ++ + + + ++ NG D +Y LI+ L
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPK 416
G+ + A + M+ K + P PK
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPK 510
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I F L++ALC +++A L K V P + +FNI++N C + G A R+
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP-DVYTFNILINALCKV-GDPHLALRL 321
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G D V+++ +I L K L L M+ G YN +I L K
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A + M+ +G++ N +T+N+LI LCK +K+D+A + ++M+ G+ P T
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441
Query: 316 YHAFL--------------------------DIIRTGEEVFGL------------LESMR 337
Y++ L D++ G + GL L MR
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKL 396
G +PT Y +++ R + ++ E++E G PD +Y + L G +
Sbjct: 502 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 561
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+EA + +EM +K +PE + +L + N
Sbjct: 562 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 592
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ ALCR V+ A ++ ++ V P T +F ++ G+ GS A RV
Sbjct: 92 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET-TFTTLMQGFVEE-GSIEAALRVKAR 149
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G V+ + +I+ Y K + L Q G E D+ YN ++ L +
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 209
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ +M M ++G P+V TYN ++ LCK +L+EA+ ++M+ RG P I T++
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + TG EE L + G P T+ +LI + +++ E+ +G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y LI L GKL +A +M+
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 361
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+FN ++ C R A + EMS RG+ D +F+ ++ + + ++ LR+ +
Sbjct: 91 TFNTLMKALCRA-HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKAR 149
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M MG + N +I+ K V+DA+ ++ G P+ +TYN+ + LC+
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 209
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ A + D M+Q G P + TY+ ++ + + G EE G+L M GC P T+
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + +++ G PD ++ LI+AL G A + + EMK
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 411 LLPEPKTDELLQD 423
P+ T L D
Sbjct: 330 CTPDEVTYNTLID 342
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G ST Y+T+I L K + + A + D+M +
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD-----------------------L 397
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ R NA F L+ LC+ K + DA L+ ++ + P N +
Sbjct: 398 QGISR--NAIT-------------FNTLIDGLCKDKKIDDAFELINQMISEGLQP-NNIT 441
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N IL +C G ++A + M+ G DVV++ +I+ KA L++ M
Sbjct: 442 YNSILTHYCK-QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ K YN V+ +L + ++DA+SL + M E G P+ +TY + + LC+
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG- 559
Query: 295 DEARQAFD---EMLQRGISPTIRTY 316
++AFD EM+ +G P ++
Sbjct: 560 -PIKEAFDFMLEMVDKGFIPEFSSF 583
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 47/351 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + + Y +I+ L + KF+ A + +M P+ VT L
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL---------- 383
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
IN Y RF+ A+ I F+ +LS D P NT+++N
Sbjct: 384 ------INQLYVEGRFETALTI--FEWMLS------------------HDSLP-NTETYN 416
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+I+ G+C+I G ++A ++ +M + G +V++++ II Y K ++ +RL + MK
Sbjct: 417 VIIKGFCSI-GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKG 475
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I ++G ++ A SL M E G++PNVVTYN++I K+D+
Sbjct: 476 NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD 535
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
A F +M++ G P+ TY+ + + I E G M K G P TY
Sbjct: 536 ALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG---KMVKQGLLPNVITYTS 592
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
I + + FK+++E+ + P+ +Y++LI L G+ E+A +
Sbjct: 593 FIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAER 643
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 12/370 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG + ++ MI IL K A ++ + P T +L+I +C
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII---GHCKNG 251
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ A F + + L++ LC +++A ++ +K + P ++
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP-TVHAY 310
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I + C+ G S EA ++ +M +RG +V +++ +IS S+ + ++ +M
Sbjct: 311 TIPIVSLCDA-GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKML 369
Query: 236 RMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+ Y+A+I+ L +GR + A+++ + M PN TYN +IK C +
Sbjct: 370 ADGLVPTAVTYSALINQLYVEGRF-ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
+A FD+ML+ G SP + TY+ + I + G LLE M+ G + TY L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I FSR + + F ++NE+ E+G P+ +Y A+I+ K+++A + +M E
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548
Query: 412 LPEPKTDELL 421
+P T ++
Sbjct: 549 VPSSGTYNMM 558
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 168/382 (43%), Gaps = 30/382 (7%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
N+ E+ FF W + + H + +M+ L + R F A D +R
Sbjct: 87 THNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPA----DNVR-------- 134
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYK--NVQDA 157
+++I+ +V R I + F + F LL L ++ +
Sbjct: 135 ------ILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRD 188
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
++ N + P N +FN ++ CN G +EAE + + G C D +++ +I
Sbjct: 189 VYIEMLNSGIRP-NLFTFNAMIKILCNK-GKVQEAELIMGHIFHYGACPDTFTYTSLIIG 246
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAP 276
+ K NL +FD+M + G + + Y+A+I+ L ++GRL ++A+ +++ M +KG+ P
Sbjct: 247 HCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL-EEAMDMLEEMIDKGIEP 305
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLL 333
V Y I LC A + EA + +M +RG P ++TY A + + R G E G+
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M G PT TY LI + +F ++ + + + P+ +Y +I
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425
Query: 394 GKLEEAHQYYMEMKEKQLLPEP 415
G +++A + +M + P P
Sbjct: 426 GYIQKATAIFDQMLKAG--PSP 445
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 194/466 (41%), Gaps = 44/466 (9%)
Query: 31 SELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDE 90
S L++++ +V +E A T F W + T Y+ +I + A A+ D+
Sbjct: 381 SALINQL--YVEGRFETALTIFEWMLSHDSLPN-TETYNVIIKGFCSIGYIQKATAIFDQ 437
Query: 91 MRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR 150
M P+++T I+I Y + A+ K + + L+S R
Sbjct: 438 MLKAGPSPNVITYN---IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSR 494
Query: 151 YKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
++ A L + P N ++N I+NG+ + W +M + G
Sbjct: 495 GGKLEHAFSLFNEMVEHGISP-NVVTYNAIINGYLTVAKVDDALALFW-KMVESGNVPSS 552
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ +IS +SK + + +M + G+ + Y + I L K A +
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M+++ PN+ TY+SLI LC+ + ++A + D+ G P + TY + + G
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGR 668
Query: 328 --EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E L+ESM+K G QP+ + Y L+ + + + K+++ + G P S Y A
Sbjct: 669 CYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKA 728
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQ--------------LLPEPKTD---ELL-----QD 423
LI AL ++A + M +K LL E +TD ELL ++
Sbjct: 729 LICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788
Query: 424 WSYNKQ---FVERQIASLKA--HQPQSGQNTRVISKKSDQDREFLQ 464
+ N Q + R++++L PQ + ++ +K Q + L+
Sbjct: 789 CTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKEKQKQTADVLR 834
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 191 EAERVWMEMSQRGICYD----VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
E +RV +S+ YD + SFS ++ K ++ +M GI + +
Sbjct: 146 EVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTF 205
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
NA+I L V++A +M + G P+ TY SLI CK LD A + FD M++
Sbjct: 206 NAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVK 265
Query: 307 RGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G P TY A ++ + G EE +LE M G +PT Y + I +
Sbjct: 266 DGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCE 325
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K+ ++ + G GP+ +YTALI L +GK E A Y +M L+P T L +
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385
Query: 424 WSY 426
Y
Sbjct: 386 QLY 388
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 21/368 (5%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG Y+ MI+ K + + A +++D M P +VT T+L R C
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTIL---RSLCDSGK 219
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNT 172
+ +A+ + + + L+ A CR V A L+ C DV
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVV---- 275
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N+++NG C G EA + +M G +V++ + I+ +L
Sbjct: 276 -TYNVLVNGICKE-GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M R G +N +I+ L + L+ AI +++ M + G PN ++YN L+ CK +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
K+D A + + M+ RG P I TY+ L + + G E+ +L + GC P TY
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+I ++ + G K+ +E+ PD +Y++L+ L GK++EA +++ E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 410 QLLPEPKT 417
+ P T
Sbjct: 514 GVRPNAVT 521
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 175/369 (47%), Gaps = 19/369 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K A ++D M + P ++T ILI C VG+A+
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT---ILIEATCRDSGVGQAMKLLD 263
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILNGW 182
+ + + L++ +C+ + +A + F N P N + NIIL
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEA--IKFLND--MPSSGCQPNVITHNIILRSM 319
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +AE++ +M ++G VV+F+ +I+ + L + + + ++M + G + +
Sbjct: 320 CST-GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN ++H K + + AI ++ M +G P++VTYN+++ LCK K+++A + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 303 EMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++ +G SP + TY+ +D + +TG+ + LL+ MR +P TY L+ SR
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAI-KLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP-EPKT 417
+ K ++E G P+ ++ +++ L + + A + + M + P E
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557
Query: 418 DELLQDWSY 426
L++ +Y
Sbjct: 558 TILIEGLAY 566
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D+ P T ++ G+C + G +R+A ++ + G DV++++ +IS Y KA ++
Sbjct: 136 DIIPCTT-----LIRGFCRM-GKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L + D RM + D YN ++ +L +K A+ ++ M ++ P+V+TY LI
Sbjct: 190 NALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
+ C+ + +A + DEM RG +P + TY+ ++ I + G +E L M GCQ
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P T+ ++++ ++ + K+ ++ G P ++ LI+ L G L A
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 403 YMEMKEKQLLPEPKT-DELLQDWSYNK------QFVERQIA 436
+M + P + + LL + K +++ER ++
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 16/327 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y+ ++ + K + D A +++M P+++T I++R C+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN---IILRSMCST 322
Query: 117 HDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNT 172
GR ++A R F+ + F L++ LCR + A + L K N+
Sbjct: 323 ---GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379
Query: 173 KSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N +L+G+C R E ++E M RG D+V+++ +++ K + + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIE--YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+Q+ G YN VI LAK AI L+ M K + P+ +TY+SL+ L +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
K+DEA + F E + G+ P T+++ L R + L M GC+PT +Y
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENG 375
+LI+ + ++ NE+ G
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKG 584
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 132/297 (44%), Gaps = 18/297 (6%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E + M G D++ + +I + + K ++ + ++ G D Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I K + +A+S++ M V+P+VVTYN++++ LC + KL +A + D MLQ
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R P + TY ++ V LL+ MR GC P TY +L+ + +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K N++ +G P+ ++ ++ ++ G+ +A + +M K P T +L +
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 424 WSYNKQFVERQIASLKAHQPQSGQNTRVIS-----------KKSDQDREFLQQPETR 469
+ K + R I L+ P+ G +S KK D+ E+L++ +R
Sbjct: 353 FLCRKGLLGRAIDILE-KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G++ S ++ +I L + A ++++M P+ ++ LL +C +
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL---HGFCKEKKM 395
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
RAI I + +L+ALC+ V+DA ++ +K P ++N
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-LITYNT 454
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G G + +A ++ EM + + D +++S ++ S+ + + ++ F + +RM
Sbjct: 455 VIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 238 GIECDRKVYNAVIHALAKGR-----------------------------------LVKDA 262
G+ + +N+++ L K R + K+A
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Query: 263 ISLMKSMEEKGV 274
+ L+ + KG+
Sbjct: 574 LELLNELCNKGL 585
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 5/286 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N SFNI++ G + G +A +W M + G D +++ II + K ++K L +
Sbjct: 58 NVVSFNIMMRGLFDN-GEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHV 116
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ + G D Y+A+I+ L K + A+S++ M + G PN YN+LI
Sbjct: 117 LEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVG 176
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
A K D+A + F EM SPTI TYH ++ + GE E + L++ M + G +P T
Sbjct: 177 ASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVIT 236
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+K + + ++WN++ G PD + LIH L GK + A Y +M
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMN 296
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
P T L + Y + R + A +SG +IS
Sbjct: 297 HWNCAPNLVTHNTLMEGFYKDGDI-RNALVIWARILRSGLQPDIIS 341
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 7/315 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKD 166
I++R +V +AI+ + K+ F + ++ C+ + + H++
Sbjct: 64 IMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGK 123
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ +++ ++NG C +A V M + G + ++ +I+ + A
Sbjct: 124 GGVLDAFAYSAMINGLCKE-AKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDD 182
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+R+F +M M Y+ +I+ L KG +A L+K M EKG P V+TY+ L+K
Sbjct: 183 AIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQ 342
LC+ K++ A Q ++++L +G P ++ + H + +T + L M C
Sbjct: 243 GLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKT-QHALMLYFDMNHWNCA 301
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P T+ L++ F + N +W I +G PD SY + L ++ A +
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILF 361
Query: 403 YMEMKEKQLLPEPKT 417
+ K++ P T
Sbjct: 362 LHDALTKKIFPTIIT 376
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 13/253 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI L K K D A ++++ M P+ TL I + AI F
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTL---INGFVGASKFDDAIRVFR 188
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWC 183
+ I + L++ LC+ + +A L+ K++ K ++++++ G C
Sbjct: 189 EMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLV---KEMLEKGWKPCVITYSLLMKGLC 245
Query: 184 NIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G E A ++W ++ +G DV + +I L L+ M +
Sbjct: 246 Q--GHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPN 303
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+N ++ K +++A+ + + G+ P++++YN +K LC ++ A
Sbjct: 304 LVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLH 363
Query: 303 EMLQRGISPTIRT 315
+ L + I PTI T
Sbjct: 364 DALTKKIFPTIIT 376
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG + Y+T+I KFD A + EM + P++VT T LI C
Sbjct: 157 KSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT---LINGLCKGE 213
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
A + + + + L+ LC+ V+ A L +K P + +
Sbjct: 214 RFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKP-DVQMH 272
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI+++G C+ +G ++ A ++ +M+ ++V+ + ++ + K ++ L ++ ++
Sbjct: 273 NILIHGLCS-VGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARIL 331
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
R G++ D YN + L + AI + K + P ++T
Sbjct: 332 RSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 10/250 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +++ +++NG+C I G AE + +M +G+ + + F+ +I Y + + L++
Sbjct: 107 NERTYGVLINGFCKI-GQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 165
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
M++MG+E D YN + L + + +A +L+ M E GV PN VTY +LI CK
Sbjct: 166 KAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCK 225
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPT 344
+ EAR+ F EM ++G +P++ TY+ + IR E + M K G P
Sbjct: 226 DGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAER---FRKEMEKKGFVPD 282
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY L+ + K++ E+ + G P+ +YTALI L G+ E A Q Y
Sbjct: 283 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYD 342
Query: 405 EMKEKQLLPE 414
+M + L+P+
Sbjct: 343 DMLKAGLIPD 352
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 7/269 (2%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + R Y +I K+ + + A L+ +M+G G + + T+ I YC
Sbjct: 102 NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM---IDGYCRKGM 158
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
V A+ A ++ + I + L LCR + +A+ L+ V P N ++
Sbjct: 159 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP-NYVTYT 217
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ C G EA R++ EM+++G VV+++ +I Y+K ++ + R +M++
Sbjct: 218 TLISIHCKD-GDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEK 276
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G D Y +++H V A+ L + M+++G PNVV Y +LI L K + +
Sbjct: 277 KGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEA 336
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
A Q +D+ML+ G+ P Y A + + T
Sbjct: 337 AFQLYDDMLKAGLIPDDSLYSALVGSLHT 365
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 125/282 (44%), Gaps = 31/282 (10%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C V P + +++++G C G +A R+ +M + G+ + + ++ ++ CY + +
Sbjct: 8 CPGSVSPL---AASVVVDGLCKS-GRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 63
Query: 223 NLHKVLRLFDQMKRMGIEC------------------------DRKVYNAVIHALAKGRL 258
+ +V + + M+ GIE + + Y +I+ K
Sbjct: 64 DDGRVQEILEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQ 123
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++ A L+ M+ +GV N + +N++I C+ +D+A + M + G+ I TY+
Sbjct: 124 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 183
Query: 319 F---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + +E LL M +MG P TY LI + +++ E++E G
Sbjct: 184 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P +Y +IH G + EA ++ EM++K +P+ T
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYT 285
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 22/385 (5%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D+ AF F K + Y ++ L K + A L+DEMR P++ T
Sbjct: 92 DFGQAFKFLAEMVKNHCLP-TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTY 150
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
+++ C + A + + + + LC+ V +A +
Sbjct: 151 N---VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL-A 206
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
V P + S+ ++NG C G A R+ MS RG DVV++S +I + K
Sbjct: 207 RMPVTP-DVVSYTTVINGLCKS-GDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGE 264
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + + L D M ++G + YN+++ AL + + A ++ ME +G P+VV+YN+
Sbjct: 265 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 324
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLLESMR----- 337
I LCKA ++ +A+ FD M++RG +P +Y + DI+ + GL + R
Sbjct: 325 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEAC 384
Query: 338 --------KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
+ C+P Y +++ + RQ ++ ++ E N + ++ L+H
Sbjct: 385 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK-NCCNVVTWNILVHG 443
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPE 414
L ++ +L +A + M ++ +P+
Sbjct: 444 LCVDDRLSDAETMLLTMVDEGFIPD 468
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D F +F I+L G C +A ++ M + G D ++ +IS YSKA+
Sbjct: 38 CQPDAF-----TFAILLRGLCRS-NQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAK 91
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + + +M + Y ++ L K +DA+ L+ M +KG +PN+ TYN
Sbjct: 92 DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYN 151
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
+++ LC+ RKLDEA++ +EM RG P + TY++F+ + + V + + +M
Sbjct: 152 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 211
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P +Y +I + + ++ + +S G PD +Y++LI G++E A
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERA 268
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 6/253 (2%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A V+ EM + D +F+ ++ ++ L K +L +MK MG D +YNA+I
Sbjct: 25 KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALI 84
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+K + A + M + P VVTY +++ LCKA + +A + DEM +G S
Sbjct: 85 SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY+ ++ + R +E +LE M G P TY IK + + K
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ PD SYT +I+ L +G L+ A + M + P+ T L D
Sbjct: 205 LARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261
Query: 428 KQFVERQIASLKA 440
VER + L +
Sbjct: 262 GGEVERAMGLLDS 274
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 162/370 (43%), Gaps = 55/370 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K D+A ++D M P +VT +L I +C +V RA+
Sbjct: 217 YTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL---IDGFCKGGEVERAM---- 269
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
GLL ++ + + C ++ +N+ L G + +G
Sbjct: 270 ---------------GLLDSMLK----------LGCRPNMVAYNS------LLGALHRLG 298
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE------- 240
+AE + +EM +RG DVVS++ I KA + K +FD+M G
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358
Query: 241 ---CDRKVYNAVIHALAKGRLVKDAISLM-KSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
D +Y ++ L KG +A +L K ++EK P+V YN ++ CK R++D+
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418
Query: 297 ARQAFDEMLQRG----ISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
A Q +ML++ ++ I + +D + E +L +M G P TY L+
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAET--MLLTMVDEGFIPDFVTYGTLV 476
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + +++ E + G PD +Y+ALI L EEA+ + ++ E++ +
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536
Query: 413 PEPKTDELLQ 422
P+ KT LL
Sbjct: 537 PDDKTLGLLH 546
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 17/273 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G Y ++I K + + A L+D M P++V +LL + R + +
Sbjct: 244 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR---LGHI 300
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF--- 170
G+A + +R F + + + LC+ + V+ A+ + C + +
Sbjct: 301 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 360
Query: 171 --NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKV 227
+ + ++L+G C G EA ++ ++ IC DV ++ ++ + K R + K
Sbjct: 361 IVDILLYTVLLDGLCKG-GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L++ QM C+ +N ++H L + DA +++ +M ++G P+ VTY +L+
Sbjct: 420 LQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+CK K A + F+E ++ G P + TY A +
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 511
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
MG E + YN ++ L + A ++ + M +K P+ T+ L++ LC++ +L++
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIK 353
AR+ M + G P Y+A + ++ F L M K C PT TY ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + K+ +E+ + G P+ +Y ++ L KL+EA + EM + P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 414 EPKT 417
+ T
Sbjct: 181 DVVT 184
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G+ Y+ I L K + A A+ D M P+ + L++ I Y +
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVL 370
Query: 117 HDV----GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAE--HLMFCNKD 166
D GR A + + E + +L + C+ + + A H K+
Sbjct: 371 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN 430
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
N ++NI+++G C + +AE + + M G D V++ ++ K
Sbjct: 431 CC--NVVTWNILVHGLC-VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL-- 284
L LF++ + G D Y+A+I L + ++A L + E+ P+ T L
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHR 547
Query: 285 -IKPLCKARK 293
+K L K RK
Sbjct: 548 KLKLLNKPRK 557
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 172/406 (42%), Gaps = 56/406 (13%)
Query: 19 RNKIEECGIKVSSELVSEVLSWVRNDWEA---------AFTFFLWAGKQSGYAHSTREYH 69
R ++E KVS ELV EVL + + A+ FF+WAG+Q GY H T Y+
Sbjct: 124 RQALDEMRPKVSLELVREVLFRIVVSVDCVNRERYPKLAYKFFIWAGQQEGYQHGTSMYN 183
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAF 126
++ + + + W L +EM + G V+ +T +LI CA G R + F
Sbjct: 184 LVMKVFAECGEVKAMWRLFEEMM--DKGLP-VSSRTFHLLI---CASGKAGLRRRLVEGF 237
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F + PF +FN IL+ I
Sbjct: 238 IKSSTFNYR---------------------------------PFRN-AFNAILHTLLTIE 263
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
S E V +M G DV++++ ++ L + RL D+M R G+ D Y
Sbjct: 264 QYSL-IEWVHEKMILEGYSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTY 322
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++H L KG A++L+ M + G PNV+ + +LI L +A L+ + FDEM++
Sbjct: 323 NLLLHVLGKGDKPLAALNLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIK 382
Query: 307 RGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P + Y + + G EE + M G P TY +I+ +F
Sbjct: 383 KGCDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDK 442
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F + ++ +G P+ S Y++L+ L GK +A+ M +K
Sbjct: 443 AFAMLKDMDSHGCTPNFSVYSSLVSRLRSAGKDTQANNVIKYMTDK 488
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
T +N+++ + G + R++ EM +G+ +F +I KA +++
Sbjct: 178 GTSMYNLVMKVFAEC-GEVKAMWRLFEEMMDKGLPVSSRTFHLLICASGKAGLRRRLVEG 236
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK----GVAPNVVTYNSLIK 286
F + R +NA++H L L + SL++ + EK G +P+V+TYN +++
Sbjct: 237 FIKSSTFNYRPFRNAFNAILHTL----LTIEQYSLIEWVHEKMILEGYSPDVLTYNVVMR 292
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQP 343
KLD+ + DEM + G++P + TY+ L ++ G++ LL M +GC P
Sbjct: 293 AKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVP 352
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ LI R ++E+ + G PD YT +I + G+ EEA +++
Sbjct: 353 NVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQRFF 412
Query: 404 MEMKEKQLLPEPKT 417
+M + LP T
Sbjct: 413 DDMLLRGQLPNVYT 426
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N F +++G G+ + + EM ++G DVV ++ +IS Y A + R
Sbjct: 353 NVLHFTNLIDGLGRA-GNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQRF 411
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD M G + YN++I L A +++K M+ G PN Y+SL+ L
Sbjct: 412 FDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNFSVYSSLVSRLRS 471
Query: 291 ARKLDEARQAFDEMLQRG 308
A K +A M +G
Sbjct: 472 AGKDTQANNVIKYMTDKG 489
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE- 328
+++G YN ++K + ++ + F+EM+ +G+ + RT+H L I +G+
Sbjct: 171 QQEGYQHGTSMYNLVMKVFAECGEVKAMWRLFEEMMDKGLPVSSRTFH--LLICASGKAG 228
Query: 329 -----VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
V G ++S +P + + ++ Q+ + V ++ G PD +Y
Sbjct: 229 LRRRLVEGFIKS-STFNYRPFRNAFNAILHTLLTIEQYSLIEWVHEKMILEGYSPDVLTY 287
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ A ++ GKL++ H+ EM L P+ T LL
Sbjct: 288 NVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLL 325
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 180/411 (43%), Gaps = 47/411 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G ++ Y ++I +L ++ K A EM P V TL I +C
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL---IDGFCKR 364
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTK 173
D+ A FY + + ++S C+ ++ +A H MFC K + P ++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEP-DSV 422
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F ++NG+C G ++A RV M Q G +VV+++ +I K +L L +
Sbjct: 423 TFTELINGYCKA-GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M ++G++ + YN++++ L K +++A+ L+ E G+ + VTY +L+ CK+ +
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVF----------------- 330
+D+A++ EML +G+ PTI T++ ++ ++ GE++
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 331 ---------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + M G P TY L+K + R + ++ E+ G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
S+Y+ LI K EA + + +M+ + L + + + D Y
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 165/365 (45%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ +I + ++ + A L+ M P +++ T+ + YC
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV---VNGYCRFG 295
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ + KR + ++ LCR + +AE + + P +T +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVY 354
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G+C G R A + + EM R I DV++++ IIS + + ++ + +LF +M
Sbjct: 355 TTLIDGFCKR-GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + +I+ K +KDA + M + G +PNVVTY +LI LCK LD
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
A + EM + G+ P I TY++ ++ + ++G EE L+ G TY L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + ++ E+ G P ++ L++ L+G LE+ + M K +
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 413 PEPKT 417
P T
Sbjct: 594 PNATT 598
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 40/346 (11%)
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKS 174
+ AI F + + + ++ +C+ +++A HL+ K P + S
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVIS 283
Query: 175 FNIILNGWC----------------------------NIIG------SSREAERVWMEMS 200
++ ++NG+C +IIG EAE + EM
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
++GI D V ++ +I + K ++ + F +M I D Y A+I + +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A L M KG+ P+ VT+ LI CKA + +A + + M+Q G SP + TY +
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 321 D-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + + G+ LL M K+G QP TY ++ + K+ E G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT L+ A +G++++A + EM K L P T +L +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL-VKDAISLMKSMEEKGVAPNVVTYN 282
L + R+F++M G+ N + L+K AI + + E GV NV +YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKM 339
+I +C+ ++ EA M +G +P + +Y ++ R GE +V+ L+E M++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P + Y +I R + + ++E+ G PD YT LI G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 400 HQYYMEMKEKQLLPEPKT 417
+++ EM + + P+ T
Sbjct: 371 SKFFYEMHSRDITPDVLT 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ L K + A L+ E VT TL+ YC ++ +A
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM---DAYCKSGEMDKAQEILK 550
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I F L++ C + ++D E L+ K + P N +FN ++ +C I
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSLVKQYC-I 608
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + A ++ +M RG+ D ++ ++ + KARN+ + LF +MK
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK---------- 658
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
KG + +V TY+ LIK K +K EAR+ FD+M
Sbjct: 659 -------------------------GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 306 QRGISPTIRTYHAFLDIIRTGE 327
+ G++ + F D G+
Sbjct: 694 REGLAADKEIFDFFSDTKYKGK 715
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%), Gaps = 3/226 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +G+ V + + ++S + K+ K L+ +M RM I+ +N +I+ L K
Sbjct: 147 MKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGK 206
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+K A + ME G+ PNVVTYN++I C +++ AR FD M RG+ P TY +
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F+ + + G EE G+LE M+++G +PT TY LI + F +++ G
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P S+Y LIHALFL+ K++EA EM EK L+P+ T +L
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 170/392 (43%), Gaps = 41/392 (10%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S ++ MI +L K K A I M P++VT T+ I YC+ V A
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI---IHGYCSRGRVEGAR 246
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK-SFNIILNGW 182
F K + +S +C+ +++A ++ K++ T ++N +++G+
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 183 CN----------------------------------IIGSSREAERVWMEMSQRGICYDV 208
CN + EA+ + EMS++G+ D
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
V+++ +I+ Y + N+ K L D+M GI+ R Y ++I+ L+K +K A L +
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG- 326
+ KG+ P+++ +N+LI C +D A EM Q + P T++ + R G
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
E L+E M+ G +P + +Y LI +S+ + F+V +E+ G P +Y A
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
LI L N + + A Q EM K + P T
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 12/364 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + M+++ K + + AW L EM S+VT I+I C
Sbjct: 148 KGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFN---IMINVLCKE 204
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTK 173
+ +A + + + ++ C V+ A LM C + V P ++
Sbjct: 205 GKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC-RGVKP-DSY 262
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++G C G EA + +M + G+ V+++ +I Y NL D+
Sbjct: 263 TYGSFISGMCKE-GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDK 321
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R G+ YN +IHAL + +A ++K M EKG+ P+ VTYN LI C+
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ +A DEM+ +GI PT TY + + ++ + G ++ L E + + G P +
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + E+ + PD ++ L+ GK+E A + EMK +
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 411 LLPE 414
+ P+
Sbjct: 502 IKPD 505
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 18/316 (5%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
S M K++E G++ ++ + ++ N + E AF + ++ G + Y+ +I
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVRE-GLMPTVSTYNMLIH 339
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK 133
L K D A +I EM P VT ILI YC +V +A +
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYN---ILINGYCRCGNVKKA----FTLHDEM 392
Query: 134 FAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIG 187
+ GI+ + L+ L + ++ A+ L K +FP + FN +++G C G
Sbjct: 393 ISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP-DLIMFNALIDGHC-ANG 450
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ A + EM Q + D V+F+ ++ + + L ++MK GI+ D YN
Sbjct: 451 NMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYN 510
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I +K +KDA + M G P ++TYN+LI+ LCK + D A Q EM+ +
Sbjct: 511 TLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK 570
Query: 308 GISPTIRTYHAFLDII 323
GI+P TY + ++ I
Sbjct: 571 GITPNDNTYLSLIEGI 586
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 156/337 (46%), Gaps = 45/337 (13%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y + I+ + K K + A ++++M+ P+ VT TL I YC
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL---IDGYCNK 309
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ A + R + + L+ AL + +A+ ++ K + P ++ +
Sbjct: 310 GNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVP-DSVT 368
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI++NG+C G+ ++A + EM +GI V+++ +I SK + + LF+++
Sbjct: 369 YNILINGYCRC-GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R GI D ++NA+I + A +++K M++ V P+ VT+N+L++ C+ K+
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487
Query: 295 DEARQ--------------------------------AF---DEMLQRGISPTIRTYHAF 319
+ AR+ AF DEML G +PT+ TY+A
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNAL 547
Query: 320 LDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ + G+ LL+ M G P ++TY+ LI+
Sbjct: 548 IQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y+ +I A + + DA M+ KGV P+V N ++ K+ + ++A + EM
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 305 LQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+ I ++ T++ ++++ + +E GL+E++ G +P TY +I +
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL---GIKPNVVTYNTIIHGYCSR 239
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ +++ + G PD +Y + I + GKLEEA +MKE L P T
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299
Query: 419 ELLQDWSYNKQFVE 432
L D NK +E
Sbjct: 300 NTLIDGYCNKGNLE 313
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 58/402 (14%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R+ + ++A L + D A A+ RG + PS++T L ILI +C + + +A+
Sbjct: 39 RDINLLLASLCQAGTMDQAMAIF---RGIQCSPSVIT---LNILINGFCELQLLDKALEL 92
Query: 126 FYAY-KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM----FCNKDVFPFNTKSFNIILN 180
F+ K F + ++ C+ + A L+ C+ DV + +
Sbjct: 93 FHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITS-----VAR 147
Query: 181 GWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+C EA ++ ++M ++ D+V+++ II + KA + + + + + MG
Sbjct: 148 GFCKA-QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKARKLDEA 297
+ Y +I K + +A+ L K + + PNVVT+N+LI LCKA +L+ A
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +M R + TY +D + + G EV + E M + GC P+ TY L+
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK------------------- 395
+ + +V + G PD ++YT L+ LF NGK
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 396 ----------------LEEAHQYYMEMKEKQLLPEPKTDELL 421
++EA +YY+EM +++L P+P T +LL
Sbjct: 387 AVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 149/360 (41%), Gaps = 49/360 (13%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---M 161
T +LI C +G A+ + + D LL++LC+ + A + +
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSK 220
C+ V + NI++NG+C + + E ++ EM + + + +++ II CY K
Sbjct: 65 QCSPSVI-----TLNILINGFCELQLLDKALE-LFHEMEKNFALVPEATTYTAIIKCYCK 118
Query: 221 ---------------------------ARNLHKVLR-------LFDQMKRMGIECDRKVY 246
AR K R L D +++ + D +
Sbjct: 119 MDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +IH K V++A +++++ G PN VTY +LI CK+ L EA Q F +
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 307 RG--ISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
R P + T++A + + E F L++ M+ + TY L+ + +
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V +V+ E+ G P +YT L+HA G L++A Q M K + P+ T +L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 30/335 (8%)
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGS 188
RF F+V L++ LC+ + +A + P N + N++L C G+
Sbjct: 3 RFTFSV-------LIAGLCKAGRLGEAVECYNQMLERHCVP-NLRDINLLLASLCQA-GT 53
Query: 189 SREAERVWMEMSQRGI-CY-DVVSFSCIISCYSKARNLHKVLRLFDQM-KRMGIECDRKV 245
+A ++ RGI C V++ + +I+ + + + L K L LF +M K + +
Sbjct: 54 MDQAMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATT 108
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y A+I K + A L++ E + +V+ S+ + CKA+++DEA Q +M+
Sbjct: 109 YTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMV 166
Query: 306 QR-GISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
++ P I + H F R E + +LE++ MGC P TY LI F +
Sbjct: 167 EKKSAKPDIVAWNVIIHGFCKAGRV-REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225
Query: 361 FGNVFKVWNEIS--ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+++ +S ++ P+ ++ ALI L +LE A + +MK + L + T
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
L D KQ +++ + + G N V++
Sbjct: 286 TTLMD-GLCKQGRTSEVSRVFEEMLREGCNPSVVT 319
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLES 335
PN T++ LI LCKA +L EA + +++ML+R P +R + L + + +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLNG 394
R + C P+ T +LI F + ++++E+ +N P+ ++YTA+I
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 395 KLEEAHQYYME 405
+L++A Q E
Sbjct: 121 RLDQARQLLEE 131
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+R ++ +I L K + +A+ M E+ PN+ N L+ LC+A +D+A F
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF 61
Query: 302 DEMLQRGI--SPTIRTYHAF------LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
RGI SP++ T + L ++ E+F +E + P TY +IK
Sbjct: 62 -----RGIQCSPSVITLNILINGFCELQLLDKALELFHEME--KNFALVPEATTYTAIIK 114
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ + + ++ E S + D + T++ +++EA+Q ++M EK+
Sbjct: 115 CYCKMDRLDQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +T T + C VG A+ + + + +++ LC+ +++A
Sbjct: 284 PDQITYNTF---VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCI 214
+ ++ ++ P + +FN ++ C G+ EA + +++ +G+ DV +F+ +
Sbjct: 341 KGILNQMVDRGCLP-DITTFNTLIAALCT--GNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKG 273
I+ K + H LRLF++MK G D YN +I L G+L K A+ L+K ME G
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK-ALDLLKDMESTG 456
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ +TYN++I LCK +++EA + FD+M +GIS T++ +D + + ++ F
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L+ M G QP N TY ++ + + + ++ NG D +Y LI+ L
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPK 416
G+ + A + M+ K + P PK
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPK 602
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I F L++ALC +++A L K V P + +FNI++N C + G A R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP-DVYTFNILINALCKV-GDPHLALRL 413
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G D V+++ +I L K L L M+ G YN +I L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A + M+ +G++ N +T+N+LI LCK +K+D+A + ++M+ G+ P T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 316 YHAFL--------------------------DIIRTGEEVFGL------------LESMR 337
Y++ L D++ G + GL L MR
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKL 396
G +PT Y +++ R + ++ E++E G PD +Y + L G +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+EA + +EM +K +PE + +L + N
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ ALCR V+ A ++ ++ V P T +F ++ G+ GS A RV
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDET-TFTTLMQGFVEE-GSIEAALRVKAR 241
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G V+ + +I+ Y K + L Q G E D+ YN ++ L +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ +M M ++G P+V TYN ++ LCK +L+EA+ ++M+ RG P I T++
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + TG EE L + G P T+ +LI + +++ E+ +G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y LI L GKL +A +M+
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 167/399 (41%), Gaps = 18/399 (4%)
Query: 36 EVLSWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR- 92
++L+ +R D +AA A + +A Y +I LG V D L+ EMR
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 93 -GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALC 149
G + +V + Y A++ + F + + + LL+ L
Sbjct: 103 EGHQVKLGVVHS-----FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 150 RYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
++ E + + + P + +FN ++ C R A + EMS RG+ D
Sbjct: 158 EGSKMKLLESVYSEMGARGIKP-DVVTFNTLMKALCRA-HQVRTAVIMLEEMSSRGVAPD 215
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+F+ ++ + + ++ LR+ +M MG + N +I+ K V+DA+ ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG 326
G P+ +TYN+ + LC+ + A + D M+Q G P + TY+ ++ + + G
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE G+L M GC P T+ LI + + +++ G PD ++
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI+AL G A + + EMK P+ T L D
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G ST Y+T+I L K + + A + D+M +
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD-----------------------L 489
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ R NA F L+ LC+ K + DA L+ ++ + P N +
Sbjct: 490 QGISR--NAIT-------------FNTLIDGLCKDKKIDDAFELINQMISEGLQP-NNIT 533
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N IL +C G ++A + M+ G DVV++ +I+ KA L++ M
Sbjct: 534 YNSILTHYCK-QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ K YN V+ +L + ++DA+SL + M E G P+ +TY + + LC+
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG- 651
Query: 295 DEARQAFD---EMLQRGISPTIRTY 316
++AFD EM+ +G P ++
Sbjct: 652 -PIKEAFDFMLEMVDKGFIPEFSSF 675
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +T T + C VG A+ + + + +++ LC+ +++A
Sbjct: 284 PDQITYNTF---VNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCI 214
+ ++ ++ P + +FN ++ C G+ EA + +++ +G+ DV +F+ +
Sbjct: 341 KGILNQMVDRGCLP-DITTFNTLIAALCT--GNRLEEALDLARQVTVKGVSPDVYTFNIL 397
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKG 273
I+ K + H LRLF++MK G D YN +I L G+L K A+ L+K ME G
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK-ALDLLKDMESTG 456
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ +TYN++I LCK +++EA + FD+M +GIS T++ +D + + ++ F
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L+ M G QP N TY ++ + + + ++ NG D +Y LI+ L
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPK 416
G+ + A + M+ K + P PK
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPK 602
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I F L++ALC +++A L K V P + +FNI++N C + G A R+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP-DVYTFNILINALCKV-GDPHLALRL 413
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G D V+++ +I L K L L M+ G YN +I L K
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+++A + M+ +G++ N +T+N+LI LCK +K+D+A + ++M+ G+ P T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 316 YHAFL--------------------------DIIRTGEEVFGL------------LESMR 337
Y++ L D++ G + GL L MR
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL-NGKL 396
G +PT Y +++ R + ++ E++E G PD +Y + L G +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+EA + +EM +K +PE + +L + N
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ ALCR V+ A ++ ++ V P T +F ++ G+ GS A RV
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET-TFTTLMQGFVEE-GSIEAALRVKAR 241
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G V+ + +I+ Y K + L Q G E D+ YN ++ L +
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ +M M ++G P+V TYN ++ LCK +L+EA+ ++M+ RG P I T++
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + TG EE L + G P T+ +LI + +++ E+ +G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
PD +Y LI L GKL +A +M+
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 167/399 (41%), Gaps = 18/399 (4%)
Query: 36 EVLSWVRN--DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR- 92
++L+ +R D +AA A + +A Y +I LG V D L+ EMR
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 93 -GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED--FQGLLSALC 149
G + +V + Y A++ + F + + + LL+ L
Sbjct: 103 EGHQVKLGVVHS-----FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 150 RYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYD 207
++ E + + + P + +FN ++ C R A + EMS RG+ D
Sbjct: 158 EGSKMKLLESVYSEMGARGIKP-DVVTFNTLMKALCRA-HQVRTAVLMLEEMSSRGVAPD 215
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+F+ ++ + + ++ LR+ +M MG + N +I+ K V+DA+ ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG 326
G P+ +TYN+ + LC+ + A + D M+Q G P + TY+ ++ + + G
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
EE G+L M GC P T+ LI + + +++ G PD ++
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI+AL G A + + EMK P+ T L D
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 47/265 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G ST Y+T+I L K + + A + D+M +
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD-----------------------L 489
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ R NA F L+ LC+ K + DA L+ ++ + P N +
Sbjct: 490 QGISR--NAIT-------------FNTLIDGLCKDKKIDDAFELINQMISEGLQP-NNIT 533
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N IL +C G ++A + M+ G DVV++ +I+ KA L++ M
Sbjct: 534 YNSILTHYCK-QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ K YN V+ +L + ++DA+SL + M E G P+ +TY + + LC+
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG- 651
Query: 295 DEARQAFD---EMLQRGISPTIRTY 316
++AFD EM+ +G P ++
Sbjct: 652 -PIKEAFDFMLEMVDKGFIPEFSSF 675
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ + K++++ +L M P +T L ILI YC ++ V +
Sbjct: 95 FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFIT---LNILINCYCNLNKVDFGLAVLG 151
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCN 184
R + F L+ LC + +A L+ K V + N ++ +LNG C
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL--RKMVRMGYRPNVVTYGTLLNGLC- 208
Query: 185 IIGSSREAERVWMEMSQRG------ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G++ A ++ EM I ++V + II K + K LF +MK G
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I D Y+++IH + + A L M ++GV PNVVT+N LI LCKA K++EA
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
M+QRG SP TY+ +D G ++ L SM G + +Y +LI +
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + K++ E+ P +Y L+ LF GK+ +A + EMK L PE
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448
Query: 416 KTDELLQD 423
T +L D
Sbjct: 449 CTYNILLD 456
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 186/425 (43%), Gaps = 27/425 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD- 118
GY + Y T++ L A L +EM G G + K L+ YC + D
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC----YCTIIDS 247
Query: 119 ------VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
+ + F K + + + ++ +C + A+ L ++ V P
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP- 306
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +FN++++ C G EA + M QRG D +++ +I + + L
Sbjct: 307 NVVTFNVLIDALCKA-GKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Query: 231 FDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F M+ GIE D YN +I+ K GR+V +A L + M K + P V+TYN+L+ L
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMV-EAKKLYREMMCKEIMPTVITYNTLLTGLF 424
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTND 346
+ K+ +A F EM ++P TY+ LD + E L + QP+
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+ LI + R+ +++N +S G P+ +YT +IH L +G+LE A ++ M
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM 544
Query: 407 KEKQLLPEPKT-DELLQDWSYN---KQFVE-RQIASLKAHQPQSGQNTRVIS--KKSDQD 459
+EK P T + L++ + N ++ VE Q + K P + + V+ K ++
Sbjct: 545 EEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604
Query: 460 REFLQ 464
RE+L
Sbjct: 605 REYLH 609
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 13/276 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + T Y+T+I + D A L M V+ +LI YC
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN---VLINGYCKS- 391
Query: 118 DVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNT 172
GR + A Y+ + + + LL+ L R V+DA +L K D+ P +
Sbjct: 392 --GRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP-ES 448
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++NI+L+G C S EA ++ + + F+C+I KAR + LF+
Sbjct: 449 CTYNILLDGLCKNNHLS-EAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++ G+E + Y +IH L K +++A L MEEKG APN+VT+N+L++ C+
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
++ + + EM ++ SP T +D++ E+
Sbjct: 568 EMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 154/346 (44%), Gaps = 16/346 (4%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WE A F + G + ++ +I L K K + A L+ M P T
Sbjct: 289 WEGAKGLFNEMVDE-GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---M 161
TL I +C + A + F + + + L++ C+ + +A+ L M
Sbjct: 348 TL---IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM 404
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
C K++ P ++N +L G G R+A ++ EM + + +++ ++ K
Sbjct: 405 MC-KEIMP-TVITYNTLLTGLFRE-GKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKN 461
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+L + + LF ++ + +++N +I L K R ++ A L + +G+ PNV+TY
Sbjct: 462 NHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITY 521
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRK 338
+I LCK+ +L+ A+ F M ++G +P + T++ + +E V LL+ M +
Sbjct: 522 TVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAE 581
Query: 339 MGCQPTNDT---YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
P T + L+ K ++R++ ++ + + G G ++S
Sbjct: 582 KDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTGRGYEKS 627
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ SF+ ++ +K + V+ L+ +M +G+ D N +I+ V ++++
Sbjct: 92 ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLG 151
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
M +G +PN VT+ SL+K LC ++ EA +M++ G P + TY L+ + TG
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Query: 327 EEVFG--LLESMRK------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ L E M + +P Y +I + +++ E+ G P
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISP 271
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +Y+++IH + G+ E A + EM ++ + P T +L D
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLID 316
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 16/306 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I + K + + A+ L EM P +VT L IR + V + AI+ F
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSAL---IRGFFIVGKLKDAIDLFN 267
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ F L+ C+ ++ A+++ M +D+ P N +FN +++G+C
Sbjct: 268 KMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP-NVSTFNTLVDGFCKD 326
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+E + V+ M ++GI +VV++ ++ Y + ++K ++F+ M + G+ +
Sbjct: 327 -RKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHS 385
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I+ K + V A+ L M K + P+VVTYNSLI LCK+ K+ A Q +EM
Sbjct: 386 YNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH 445
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
RG P I TY++ L+ LL ++ G QP T +LIK + +
Sbjct: 446 DRGQPPNIITYNSILN---------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAAR 496
Query: 366 KVWNEI 371
KV+ ++
Sbjct: 497 KVFEDL 502
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 179/394 (45%), Gaps = 19/394 (4%)
Query: 39 SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGP 98
++ ND + A + F Q+ + E++ ++ L K + + T +L +M P
Sbjct: 43 TFHSNDVDGAVSLFNSLLHQNP-TLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP 101
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
+ VT ILI +C + + A + + + I + C + A
Sbjct: 102 NFVTFN---ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA- 157
Query: 159 HLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L F +K V F + S+ ++NG C + G +R A ++ + + + + V ++ +I
Sbjct: 158 -LNFHDKLVALGFHLDQVSYGTLINGLCKV-GETRAALQLLRRVDGKLVQLNAVMYNTVI 215
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
SK ++++ L+ +M I D Y+A+I +KDAI L M + +
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEV 329
P+V T+N L+ CK +L +A+ D M+ + I P + T++ +D ++ G+ V
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F + M K G +P TY L+ + +Q K++N +S+ G + SY +I+
Sbjct: 336 FAM---MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMING 392
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K+++A + ++EM K ++P+ T L D
Sbjct: 393 FCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLID 426
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 158/314 (50%), Gaps = 7/314 (2%)
Query: 144 LLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
++S L R V+ A + K F N +++ +++ + G REA +V+ M +
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRS-GRCREALKVFQAMKKA 263
Query: 203 GICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G ++++++ II +C +L K L +F++M++ G+E DR +N++I ++G L +D
Sbjct: 264 GCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED 323
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
+ + M+ +G+ ++ TYN+LI +CK +++ A M + ISP + TY +D
Sbjct: 324 SQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMID 383
Query: 322 ---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ EE GL M++ G +P +Y LI +++ +F + ++ G
Sbjct: 384 GYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
D +Y ALI A GK ++A + +MK + L+P T L D +Y+K + + S+
Sbjct: 444 DVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALID-AYSKAGMHQDATSI 502
Query: 439 KAHQPQSGQNTRVI 452
++G V+
Sbjct: 503 FVEFKRAGLKPDVV 516
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVR-KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY 113
A K++G + Y+T+I GK A + +EM+ P +T +L+ + R
Sbjct: 259 AMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRG 318
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFN 171
D R F +R I + L+ A+C+ ++ A +M K++ P N
Sbjct: 319 SLWEDSQRV---FAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISP-N 374
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+++ +++G+ + G EA ++ +M + G+ D VS++ +I Y+K L
Sbjct: 375 VVTYSTMIDGYGKL-GCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTAC 433
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M+R+G++ D YNA+I A K KDA L M+ +G+ PNV+TY++LI KA
Sbjct: 434 KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKA 493
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTY 348
+A F E + G+ P + Y + +D + G E+ LL+ M + G QP TY
Sbjct: 494 GMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTY 553
Query: 349 IMLIKKFSRWRQFGNV 364
LI + R Q NV
Sbjct: 554 NSLIDAYGRNGQVDNV 569
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 186/444 (41%), Gaps = 48/444 (10%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHS--TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPS 99
R +WE A + W +Q G+ S ++ MI+ LG++ K + A + + + G +
Sbjct: 175 RGEWERALQGYEWMVQQ-GHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNN 233
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
+ ++ R GR A ++ K A G L Y + DA
Sbjct: 234 VYAYSAMVSAYGRS------GRCREALKVFQAMKKA-------GCKPNLITYNTIIDA-- 278
Query: 160 LMFCNK---------DVFPFNTK--------SFNIILNGWCNIIGSSREAERVWMEMSQR 202
C K D+F K +FN ++ C+ +++RV+ EM +R
Sbjct: 279 ---CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRR 334
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
GI D+ +++ +I K + + M+ I + Y+ +I K ++A
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
I L M+E GV P+ V+YN+LI K + D+A A +M + G+ + TY+A +D
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDA 454
Query: 323 I-RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G+ + GL + M+ G P TY LI +S+ + ++ E G PD
Sbjct: 455 YGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPD 514
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
Y++LI + G +E+A EM + + P T L D +Y + + + K
Sbjct: 515 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID-AYGRNGQVDNVEAAK 573
Query: 440 AHQPQSGQNTRVISKKSDQDREFL 463
+ P V +K D+ E +
Sbjct: 574 GNMP-----INVFNKVGDRSTEII 592
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 180/411 (43%), Gaps = 47/411 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G ++ Y ++I +L ++ K A EM P V TL I +C
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL---IDGFCKR 807
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTK 173
D+ A FY + + ++S C+ ++ +A H MFC K + P ++
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEP-DSV 865
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F ++NG+C G ++A RV M Q G +VV+++ +I K +L L +
Sbjct: 866 TFTELINGYCKA-GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 924
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M ++G++ + YN++++ L K +++A+ L+ E G+ + VTY +L+ CK+ +
Sbjct: 925 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVF----------------- 330
+D+A++ EML +G+ PTI T++ ++ ++ GE++
Sbjct: 985 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044
Query: 331 ---------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + M G P TY L+K + R + ++ E+ G
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
S+Y+ LI K EA + + +M+ + L + + + D Y
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 1155
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 165/365 (45%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y+ +I + ++ + A L+ M P +++ T+ + YC
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV---VNGYCRFG 738
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ + KR + ++ LCR + +AE + + P +T +
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVY 797
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G+C G R A + + EM R I DV++++ IIS + + ++ + +LF +M
Sbjct: 798 TTLIDGFCKR-GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + +I+ K +KDA + M + G +PNVVTY +LI LCK LD
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
A + EM + G+ P I TY++ ++ + ++G EE L+ G TY L+
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + ++ E+ G P ++ L++ L+G LE+ + M K +
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1036
Query: 413 PEPKT 417
P T
Sbjct: 1037 PNATT 1041
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 145/346 (41%), Gaps = 40/346 (11%)
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKS 174
+ AI F + + + ++ +C+ +++A HL+ K P + S
Sbjct: 668 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVIS 726
Query: 175 FNIILNGWC----------------------------NIIG------SSREAERVWMEMS 200
++ ++NG+C +IIG EAE + EM
Sbjct: 727 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 786
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
++GI D V ++ +I + K ++ + F +M I D Y A+I + +
Sbjct: 787 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 846
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A L M KG+ P+ VT+ LI CKA + +A + + M+Q G SP + TY +
Sbjct: 847 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 906
Query: 321 D-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + + G+ LL M K+G QP TY ++ + K+ E G
Sbjct: 907 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +YT L+ A +G++++A + EM K L P T +L +
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL-VKDAISLMKSMEEKGVAPNVVTYN 282
L + R+F++M G+ N + L+K AI + + E GV NV +YN
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKM 339
+I +C+ ++ EA M +G +P + +Y ++ R GE +V+ L+E M++
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P + Y +I R + + ++E+ G PD YT LI G + A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 400 HQYYMEMKEKQLLPE 414
+++ EM + + P+
Sbjct: 814 SKFFYEMHSRDITPD 828
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ L K + A L+ E VT TL+ YC ++ +A
Sbjct: 937 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM---DAYCKSGEMDKAQEILK 993
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I F L++ C + ++D E L+ K + P N +FN ++ +C I
Sbjct: 994 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSLVKQYC-I 1051
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + A ++ +M RG+ D ++ ++ + KARN+ + LF +MK G
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 1111
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ +I K + +A + M +G+A + ++ K ++ D DE++
Sbjct: 1112 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 1171
Query: 306 Q 306
+
Sbjct: 1172 E 1172
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 18/354 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K D A+ L EM G P +VT IL+ +C V + RAI+
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYS---ILVSGFCIVGQLNRAIDLLN 257
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
I + L+ ALC+ V++AE+++ N DV ++T +++G
Sbjct: 258 EMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYST-----LMDG 312
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+C ++ A+RV+ M+Q G+ DV +S +I+ K + + + L LF+++ + +
Sbjct: 313 YC-LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y ++I L K + L M ++G P+V+TYN+LI LCK LD A F
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALF 431
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++M + I P + T+ LD + + G + + + G TY ++I +
Sbjct: 432 NKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKE 491
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + + +NG D ++ +I A F + ++A + EM + LL
Sbjct: 492 GLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 177/400 (44%), Gaps = 47/400 (11%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T ++ ++ L V+++ TA +L +M E P T L I+I +C V A +
Sbjct: 58 TFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT---LNIIINCFCHFGQVVLAFS 114
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNG 181
+ + L+ LC V++A L F +K + F + S+ I++NG
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEA--LRFHDKVLAQGFRLSGISYGILING 172
Query: 182 WCNIIGSSREAERV-----------------------------------WMEMSQRGICY 206
C I G +R A R+ + EM +GI
Sbjct: 173 VCKI-GETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISP 231
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVV++S ++S + L++ + L ++M I D Y ++ AL K VK+A +++
Sbjct: 232 DVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVL 291
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---II 323
M + V +VV Y++L+ C +++ A++ F M Q G++P + Y ++ I
Sbjct: 292 AVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKI 351
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ +E L E + + P TY LI + + V+ +++E+ + G PD +Y
Sbjct: 352 KRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITY 411
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LI AL NG L+ A + +MK++ + P T +L D
Sbjct: 412 NNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 11/186 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q T Y ++I L K + W L DEM P ++T LI C
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNN---LIDALCKNG 422
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTK 173
+ RAI F K + F LL LC+ +++A +D+ + N +
Sbjct: 423 HLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFF---QDLLTKGYCLNVR 479
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +++NG C G EA + M G D V+F +I + K +L +
Sbjct: 480 TYTVMINGLCK-EGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVRE 538
Query: 234 MKRMGI 239
M G+
Sbjct: 539 MIARGL 544
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 164/360 (45%), Gaps = 15/360 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + Y+ ++ L K + D A L+ EM P V+ TL I C +
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL---ISSLCKL 229
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A F + + L++ +C+ ++A L+ NK + P N S
Sbjct: 230 GKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP-NVIS 283
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I+N + G+ + V +M RG ++ +F+ +I + H+ L +D+M
Sbjct: 284 YTTIINALSDA-GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R G+ + YNA++H L R + DA+S+ ME G PNV TY++LI KA L
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
D A + ++ M+ G P + Y +D++ + + L+E+M+ C P T+
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
IK + KV++++ +G P+ ++Y L+ +L + + EA +M+ + +
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 161/395 (40%), Gaps = 41/395 (10%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------- 107
+ S Y+ +I + K F+ A+ L+DEM P++++ T++
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301
Query: 108 ----ILIRRYCA--VHDVGRAINAFY----AYKRFKF---------AVGIEDFQGLLSAL 148
+ R C+ +H I F+ +++ F + + L+ L
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361
Query: 149 CRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
C +++ DA + F ++ P N ++++ +++G+ G A VW M G
Sbjct: 362 CSKRSLGDAVSV-FNQMEINGCCP-NVRTYSALIDGYAKA-GDLDGASEVWNWMITHGCH 418
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+VV+++C++ + ++ L + M+ + +N I L V AI +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
M G PN TYN L+ L K R+ EA +M RGI + TY+ +
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538
Query: 326 GEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ LE + KM G +P T ++I + + + ++ + +S PD +
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT+LI + + +EEA Y M + + P T
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 186 IGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
+ S RE + V +M GI F +I Y +A + + L+ F +M+ ++
Sbjct: 86 LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPT 145
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
K+YN ++ AL + + +M++ G+ PNV TYN L+K LCK ++D A +
Sbjct: 146 VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLV 205
Query: 303 EMLQRG------------------------------ISPTIRTYHAFLDII---RTGEEV 329
EM +G +P++ Y+A ++ + T EE
Sbjct: 206 EMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEA 265
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F LL+ M G P +Y +I S V ++ G P+ ++T+LI
Sbjct: 266 FQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKG 325
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLP 413
FL G EA ++ M + ++P
Sbjct: 326 FFLKGGSHEALDFWDRMIREGVVP 349
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ +L + F+ A+ LI+ M+ P+ VT T I+ C V AI F
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF---IKGLCGSGRVDWAIKVF- 479
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
D G N FP NT ++N +L+ +++
Sbjct: 480 ------------DQMG--------------------NSGCFP-NTTTYNELLD---SLLK 503
Query: 188 SSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
R EA + +M RGI ++V+++ II Y A L + L L +M G + D
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
N VI A K V AI LM + P+++ Y SLI +C ++EA ML
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623
Query: 306 QRGISPTIRTYHAFL 320
GISP + T++ +
Sbjct: 624 SEGISPNVATWNVLV 638
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I LA R + L++ M+ +G++ + + S+I +A ++A + F M
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQ 138
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLL----ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ PT++ Y+ LD + E F ++ +M+K G +P TY +L+K + +
Sbjct: 139 DFRVKPTVKIYNHILDAL-LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+ E+S G PD SYT LI +L GK++EA + M + + +
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVC 257
Query: 422 QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSD 457
+++++ + F K P T +I+ SD
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 163/360 (45%), Gaps = 7/360 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + + +I K +K D A L D+M P+ VT ++I YC V
Sbjct: 494 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN---VMIEGYCLVG 550
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP-FNTKSFN 176
++ +A + ++ L+S LC V A + ++ + N S
Sbjct: 551 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 610
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L G+ G E +W EM+ RG+ D+VSF+ I+ K + K LF +MK
Sbjct: 611 ALLYGFFRE-GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 669
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I AL+K + A++ M G +PN VT+ LI LCK+ L
Sbjct: 670 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 729
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT-GE-EVFGLLESMRKMGCQPTNDTYIMLIKK 354
A EML + P TY+ FLD T G+ E L S G + ++ +LIK
Sbjct: 730 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKG 789
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++I+E+G PD SY+ +IH L G + +A + + EM K L P+
Sbjct: 790 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 849
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA + ++ G+ +V +++ +I K RLF +M G+E + Y +I
Sbjct: 344 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 403
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
HAL K +++DA+ L M +KG+ V YNSLI CK LD AR M++ G++
Sbjct: 404 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 463
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT +Y + + ++ +E R+M G N T+ LI F + ++ ++
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++ ++ P+ ++ +I L G + +A Q Y +M E L P+ T
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 573
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 13/310 (4%)
Query: 107 LILIRRYCAVHDV-GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CN 164
L+ IR++ D+ + + + + + GI A C +N+ A L+
Sbjct: 196 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIR-------AYCESRNLDGARGLVVRME 248
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + +N+++ G C + +EA V M G+ D V++ ++ + + L
Sbjct: 249 SEGVKASAVPYNVLMYGLCKNM-RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 307
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LR+ M R+G + +I L K LV++A SL + + G+ PNV YN+L
Sbjct: 308 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 367
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
I LCK + D+A + F EM RG+ P TY + + + G E+ L + MR G
Sbjct: 368 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ T Y LI + + + + + + G P +SY+ LI L NG L +
Sbjct: 428 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 487
Query: 402 YYMEMKEKQL 411
+ EM E+ +
Sbjct: 488 LHREMAERGI 497
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 65/391 (16%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ R H MI LG V +IDE+R E LV + L C + D+G
Sbjct: 310 ALRITHDMIR-LGFVPSEANCSFMIDELRKKE----LVEEAFSLA-----CKLGDLGMVP 359
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
N F + L+ LC+ + DA+ L + + P N ++ I+++
Sbjct: 360 NVF-------------AYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAILIHA 405
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G +A ++ +M +GI V ++ +I+ Y K +L + L M + G+
Sbjct: 406 LCKR-GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 464
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y+ +I L + + + L + M E+G+A N T+ +LI CK +K+DEA + F
Sbjct: 465 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK----- 353
D+M+ + P T++ ++ ++ + F L + M +MG +P N TY LI
Sbjct: 525 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 584
Query: 354 ------------------------------KFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
F R +F + +W+E++ G D S+
Sbjct: 585 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 644
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
T +++A E++ + EMKE+ + P+
Sbjct: 645 TIIVYAALKQHDKEKSCVLFREMKEQGVKPD 675
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + NT + +++N C G AE + EM + + +++C + ++ ++
Sbjct: 705 DGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 763
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L M + G +N +I L K +++AI LM + E G +P+ ++Y+++I
Sbjct: 764 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQ 342
LCK +++A + ++EML +G+ P + Y+ F+ ++ ++ G+ +M + G Q
Sbjct: 823 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 882
Query: 343 PTNDTYIMLIKKFS 356
P DTY L+ S
Sbjct: 883 PNWDTYRALLSGIS 896
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ LC+ + AE + C + +V P N ++N L+ + G +A+ + M
Sbjct: 717 LINNLCKSGYLGSAE--LLCKEMLAGNVLP-NKFTYNCFLD-YFATEGDMEKAKDLHSAM 772
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q G +VSF+ +I KA + + + L ++ G D Y+ +IH L K +
Sbjct: 773 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A L M KG+ P+VV YN I+ + D+A + M++ G+ P TY A
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891
Query: 320 LDII 323
L I
Sbjct: 892 LSGI 895
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY+ +T + +I L K +A L EM G P+ T L + D+
Sbjct: 706 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL---DYFATEGDM 762
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+A + A + A I F L+ LC+ +Q+A LM + F + S++ I
Sbjct: 763 EKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 821
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++ C + G +A +W EM +G+ DVV+++ I + K L ++ M R G
Sbjct: 822 IHELCKM-GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 880
Query: 239 IECDRKVYNAVIHALA 254
++ + Y A++ ++
Sbjct: 881 VQPNWDTYRALLSGIS 896
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 3/163 (1%)
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
G+ N T + ++ L K R+ AR FD+MLQ G+ Y A + R +
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
GL+ M G + + Y +L+ + + +V N + G D +Y L++
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+LE A + +M +P + D K+ VE
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 343
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 171/365 (46%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y+ +++ L + + D AL+DEM P T L + R
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR---TG 314
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
D ++ F + +G LL+ LC+ V AE + M + + P T +
Sbjct: 315 DSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP-TTAIY 373
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++NG+C + + A ++ +M R I D ++++ +I+ K + + L +M+
Sbjct: 374 NTLINGYCQV-RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G++ + +N +I A + ++ +++ M++KG+ NV+++ S++K CK K+
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA D+M+ + + P + Y++ +D I +G E+ F L+E M+ G + TY +L+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K + Q ++ ++ G PD SY +I A G + A + EM + +
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612
Query: 413 PEPKT 417
P +T
Sbjct: 613 PTLRT 617
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 190/443 (42%), Gaps = 29/443 (6%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTR-EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
D + A G+ G Y+ +IA L + K A + DEM P+ +
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG----IEDFQGLLSALCRYKNVQDA 157
T T++ H G + A + + G + + LLS LCR + +
Sbjct: 232 TYNTMI-------DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDET 284
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
LM + + P + +++I+ +G G SR ++ E ++G+ + S ++
Sbjct: 285 RALMDEMTSYSMLP-DGFTYSILFDGLTRT-GDSRTMLSLFGESLKKGVIIGAYTCSILL 342
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ K + K ++ + + G+ +YN +I+ + R ++ A S+ + M+ + +
Sbjct: 343 NGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR 402
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGL 332
P+ +TYN+LI LCK + EA EM + G+ P++ T++ +D R G E+ F +
Sbjct: 403 PDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTV 462
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L M+ G + ++ ++K F + + + +++ P+ Y ++I A
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF--VERQIASL--KAHQPQSGQ 447
+G E+A +MK + T + LL+ N Q E I +L + +P
Sbjct: 523 SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVS 582
Query: 448 NTRVIS---KKSDQDR--EFLQQ 465
+IS K D DR E LQ+
Sbjct: 583 YNTIISACCNKGDTDRALELLQE 605
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 11/282 (3%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDV 167
LI YC V D+ A + F K + L++ LC+ + + +AE L M K
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAER---VWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ ++FN +++ + G + + E+ V +M +GI +V+SF ++ + K +
Sbjct: 436 VDPSVETFNTLIDAY----GRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + + D M + + +VYN++I A + + A L++ M+ GV+ ++ TYN L
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGC 341
+K LCK ++DEA + + +G+ P + +Y+ + + LL+ M K
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDI 611
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+PT TY L+ + ++ ++ + P S Y
Sbjct: 612 RPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 14/333 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+G +T Y+T+I +VR A+++ ++M+ P +T L I C +
Sbjct: 363 HTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL---INGLCKME 419
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSFN 176
+ A + ++ +E F L+ A R ++ ++ +D N SF
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ +C G EA + +M + + + ++ II Y ++ + L ++MK
Sbjct: 480 SVVKAFCKN-GKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ YN ++ L K + +A L+ ++ +G+ P+VV+YN++I C D
Sbjct: 539 SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR 598
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIK 353
A + EM + I PT+RTYH L + + V L + M +P++ Y
Sbjct: 599 ALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY----- 653
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+R V + E+SE G D + T L
Sbjct: 654 -GTRCENESKVASLKKEMSEKGIAFDDTERTNL 685
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM--EEKGVAPNVVTYNSLIKPL 288
F + G D +N + A + +A+++++ M E P+ +YN +I L
Sbjct: 146 FGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGL 205
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTN 345
++ K +A + FDEM+ RG++P TY+ +D ++ G E F L + M + G +P
Sbjct: 206 WRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNV 265
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
TY +L+ R + + +E++ PD +Y+ L L G
Sbjct: 266 VTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTG 314
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG S ++T+I G+ + + + ++ +M+ ++++
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS-------------- 477
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
G + AF + AV I D D H KDV P N + +N
Sbjct: 478 --FGSVVKAFCKNGKIPEAVAILD---------------DMIH-----KDVVP-NAQVYN 514
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I++ + G + +A + +M G+ + +++ ++ K + + L +
Sbjct: 515 SIIDAYIE-SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTN 573
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D YN +I A A+ L++ M + + P + TY+ L+ L A ++ +
Sbjct: 574 QGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHD 633
Query: 297 ARQAFDEMLQRGISPTIRTY 316
+ M+ + + P+ Y
Sbjct: 634 MECLYQHMVHKNVEPSSSIY 653
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 159/391 (40%), Gaps = 62/391 (15%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTK--QTLLILIRRYCAVHDVGRAINAFYAYKRF 132
L V + A A+ R G VT T ILI C + A +
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKK 121
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNI 185
F V F LL LC K DA ++ C DVF S+N +L G C+
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVF-----SYNNLLKGLCDE 176
Query: 186 IGSSREAERVWMEMSQRG--ICYDVVSFSCIISCYSK--------ARNLHKVLRLFDQMK 235
S E + M RG DVVS++ +++ + K A+ + K + + + M
Sbjct: 177 NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMV 236
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ D YN+++H K+AI +K M GV PNVVTY+SL+ LCK +
Sbjct: 237 KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRST 296
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-----------------IIRTG------------ 326
EAR+ FD M +RG+ P I TY L ++R G
Sbjct: 297 EARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 356
Query: 327 ---------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+E LL SM +G +P TY LI + R + + ++ E+ +G
Sbjct: 357 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 416
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
P+ +Y ++ LF + A + Y+ + +
Sbjct: 417 PNIITYNIILQGLFHTRRTAAAKELYVSITK 447
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 125/256 (48%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N +++ ++N C G S EA +++ M++RG+ D+ ++ ++ + K + + +L
Sbjct: 278 NVVTYSSLMNYLCKN-GRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
FD M R+G++ D YN +I + +A L+ SM GV P++VTY +LI C+
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
++D+A F EM+ G+SP I TY+ L + R L S+ K G Q T
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +++ + +++ + + ++ +I AL G+++EA +
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516
Query: 408 EKQLLPEPKTDELLQD 423
L+P+ +T L+ +
Sbjct: 517 ANGLVPDVRTYSLMAE 532
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 14/242 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T TL I C + A + I + L++ CR + DA
Sbjct: 347 PDIITYNTL---IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 403
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L + V P N ++NIIL G + ++ A+ +++ +++ G ++ +++ I+
Sbjct: 404 LALFKEMVSSGVSP-NIITYNIILQGLFHTRRTA-AAKELYVSITKSGTQLELSTYNIIL 461
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + LR+F + ++ + + +N +I AL K + +A L + G+
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEE 328
P+V TY+ + + L + L+E F M + G S R ++ + DI R G
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581
Query: 329 VF 330
+F
Sbjct: 582 LF 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V +++ +I C +A L + + G D + ++ L + DA+ + +
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRTYHAFLD-I 322
+ M E G P+V +YN+L+K LC + EA + M G P + +Y+ L+
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ G + ++M K +V N + +NG PD +
Sbjct: 212 FKEGIQTKLTAQAMDK-------------------------AMEVLNTMVKNGVMPDCMT 246
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
Y +++H +G+ +EA +M+ + P T L ++
Sbjct: 247 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 288
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ LC+ + DA L+ + FP N FN I++ C G S EA
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMAERGCFP-NALVFNGIMDALCKE-GRSAEAYGYIET 70
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ +V+++ +I + K LH+ L + +M G E + YN +H L K
Sbjct: 71 MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA++L ++M EK + +V Y +LI LC+A KL EA DEM G P Y+A
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 319 FLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + G E L + M G P T+ M++ + R + + + ++ G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
P Y LI AL G++ EA++ EM + L P +T L++
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMR 297
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M+++G VV+F ++ KA L L + M G + V+N ++ AL K
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A +++M GV+P +VTYN LI CK KL A + EM RG P TY+
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 319 FL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
FL + + G ++ L +M + + Y LI + + + + +E+ +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P Y A++ L ++ EAH+ + M +LP+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPD 219
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ ++ L K + DA L++ M E+G PN + +N ++ LCK + EA + M
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETM 71
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQF 361
G+SPTI TY+ +D E++ LE +++M G +P + TY + ++ +
Sbjct: 72 RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++ ++E D YT LI L GKL EA+ EM+ +P+P +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAI 191
Query: 422 QDW 424
W
Sbjct: 192 LSW 194
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + GC PT T+ +L+ + + + F++ ++E G P+ + ++ AL G+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL-----KAHQPQ 444
EA+ Y M+ + P T +L D ++ + R + L + H+P
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPN 114
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 184/414 (44%), Gaps = 53/414 (12%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWA--LIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+G T Y+ +I G ++ D A A L+ EM+ + PS T +LI C
Sbjct: 410 AGIEPDTWTYNLLID--GYLKSHDMAKACELLAEMKARKLTPSPFTYS---VLISGLCHS 464
Query: 117 HDV----------------------GRAINAFYAYKRFKFAVGIED-------------F 141
D+ G I A+ R++ A+ + +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L+ LCR K V++A+ L+ K + P N ++ +N + G + AER + +M
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKP-NAHTYGAFINLYSKS-GEIQVAERYFKDM 582
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
GI + V ++ +I + N + L F M G+ D + Y+A+IH+L+K
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+A+ + + GV P+V YNSLI CK +++A Q +DEML GI+P I Y+
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702
Query: 320 LD---IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ ++G E F L + M G P Y +LI + +++E +
Sbjct: 703 INDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 762
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
G S++ +LI + +GK+ EA + + +M +K+L P T +L D +Y K
Sbjct: 763 SVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID-AYGK 814
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 163/397 (41%), Gaps = 20/397 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+ MI + K + A +L +EM P T +LI Y HD+
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN---LLIDGYLKSHDM 432
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A K K + L+S LC ++Q A ++ D N N+ +
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL----DQMIRNGVKPNVFM 488
Query: 180 NGWCNIIGSSREAERVWME------MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
G +I + + R M M G+ D+ ++C+I +A+ + + L
Sbjct: 489 YG--TLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M GI+ + Y A I+ +K ++ A K M G+ PN V Y LIK C
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
EA F ML++G+ P IR Y A + + + G +E G+ K G P Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI--HALFLNGKLEEAHQYYMEMKE 408
LI F + ++++E+ NG P+ Y LI + +G L EA + + EM
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 409 KQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS 445
K + P+ +L D + +E+ ++ Q +S
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 763
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 157/342 (45%), Gaps = 19/342 (5%)
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
W + M + P + T + I+ +C V DV + ++ + + +
Sbjct: 227 WKVYGSMVEAKIVPDVYTYTNV---IKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAF 282
Query: 145 LSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ LC+ V +A + + K + P + ++ ++++G+C S+EA+ ++ M
Sbjct: 283 IGGLCQTGAVDEALEVKKLMMEKGLGP-DGHTYTLLVDGFCKQ-KRSKEAKLIFESMPSS 340
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ + +++ +I + K N+ + LR+ D+M G++ + YNA+I +AK + A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-- 320
+SL M G+ P+ TYN LI K+ + +A + EM R ++P+ TY +
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 321 -----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
D+ + E +L+ M + G +P Y LIK + + ++ ++ + NG
Sbjct: 461 LCHSSDLQKANE----VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD Y LI L K+EEA ++M EK + P T
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 7/275 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN--IILNGWCNIIGSSREAERVWMEMSQ 201
L+ C+ K ++A+ L+F + N F +++G+ G+ EA R+ EM
Sbjct: 317 LVDGFCKQKRSKEAK-LIFESMPSSGLNPNRFTYTALIDGFIKE-GNIEEALRIKDEMIT 374
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
RG+ +VV+++ +I +KA + K + LF++M GIE D YN +I K +
Sbjct: 375 RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAK 434
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L+ M+ + + P+ TY+ LI LC + L +A + D+M++ G+ P + Y +
Sbjct: 435 ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIK 494
Query: 322 II---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E LL+ M G P Y LI R ++ + ++ E G P
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +Y A I+ +G+++ A +Y+ +M ++P
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIH 251
+V+ M + I DV +++ +I + K ++ K + +M++ EC + YNA I
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK---ECKPNLFTYNAFIG 284
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L + V +A+ + K M EKG+ P+ TY L+ CK ++ EA+ F+ M G++P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY A +D I+ G EE + + M G + TY +I ++ + ++
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
NE+ G PD +Y LI + + +A + EMK ++L P P T +L
Sbjct: 405 NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 19/276 (6%)
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ L+ C ++ N F+I ++ + ++G EA V++ G F +I C
Sbjct: 158 DSLVRCYREFGGSNLTVFDIFIDKF-RVLGFLNEASSVFIASISEGF------FPTLICC 210
Query: 218 YSKARNLHKV------LRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSME 270
+ R+L K +++ M I D Y VI A K G ++K + L S
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVL--SEM 268
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGE 327
EK PN+ TYN+ I LC+ +DEA + M+++G+ P TY +D + +
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + ESM G P TY LI F + ++ +E+ G + +Y A+I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ G++ +A + EM + P+ T LL D
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 129/291 (44%), Gaps = 18/291 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G Y+++I+ K + A L DEM P++V TL ++
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL---------IN 704
Query: 118 DVG--RAINAFYAYKRFK--FAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFP 169
D G ++ N A+K F + GI + L+ + N++ A L +
Sbjct: 705 DYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 764
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +FN +++ +C G EA ++ +M + + ++V+++ +I Y KA + + +
Sbjct: 765 GSLSAFNSLIDSFCKH-GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 823
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF M+ I + Y +++ + + ISL K ME +G+A + + Y + C
Sbjct: 824 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 883
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
K K EA + ++ L GI + A + + +++ +LE + +MG
Sbjct: 884 KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 934
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 11/263 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I GK + A +L E + G SL +L I +C V A F
Sbjct: 736 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSL---IDSFCKHGKVIEARELFD 791
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNI 185
K I + L+ A + + +++AE L +++ P NT ++ +L + N
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP-NTLTYTSLLLSY-NQ 849
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
IG+ + ++ +M RGI D +++ + S Y K + L+L ++ GI+ + V
Sbjct: 850 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 909
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++A+I L K + + + L+ M ++ ++ + T N+L+ K+ DEA + M
Sbjct: 910 FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 969
Query: 306 QRGISPTIRTYHAFLDIIRTGEE 328
+ G P T + D I TG +
Sbjct: 970 RLGWVP---TSLSLTDSISTGRD 989
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 15/346 (4%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A A+++EM+ P + Q+ +LIR + R + +
Sbjct: 13 AEAIVEEMKYAGFSPDV---QSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMS 200
L+S LC+ + +AE + N S+NII++G+C +R E+ EM
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCK----ARNIEKALAFLREME 125
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G ++S I+ + K N+ K + +F +M G E D +N ++ L + R +
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIH 185
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A L +SM +G P+VVTYN++I LCK +KLDEA + M Q +SPT TY +
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245
Query: 321 DII---RTGEEVFGLLESMRKMGCQPTNDTY--IMLIKKFSRWRQFGNVFKVWNEISENG 375
D + ++ + + E M + C T Y ++LI + R+ G +++ E+ G
Sbjct: 246 DHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRG 305
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P +Y L+ L KL++A + M ++ P T E+L
Sbjct: 306 ISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEIL 351
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL ++ G+ + Y +++ K A + EM P +V LL +
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
R +H+ A F + + + +++ LC++K + +A L+ +DV P
Sbjct: 180 RARKIHE---ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY---DVVSFSCIISCYSKARNLHK 226
++ +++ C ++A V+ +M++ G C S +I+ KAR +
Sbjct: 237 -TFVTYTTLIDHLCKF-ARLQQAYEVFEKMAE-GPCPCTEPAYSVLILINGLCKARRPGE 293
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F +M+ GI YN ++ L ++DA+ L M ++ APN+ TY LI
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQP 343
LCK +++EA + M +G P+++ + L + R G ++ F L + M ++ CQ
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 413
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ +L+ R ++++ G PD+ +Y L+ L GK ++A +
Sbjct: 414 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 473
Query: 404 MEM 406
E+
Sbjct: 474 EEL 476
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+AE + EM G DV S +I + K+ + + D+M G+ + +YN +I
Sbjct: 12 QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K ++ +A S +K M + APNVV+YN +I CKAR +++A EM + G
Sbjct: 72 SCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP 130
Query: 311 PTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT Y + + +TG + + M GC+P + +L+ R R+ ++
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ G PD +Y +I L KL+EA MK++ + P
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 10/279 (3%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
+++ + W + D EA F L KQ + + Y T+I L K + A+ + ++M
Sbjct: 209 MIAGLCKWKKLD-EA--VFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G P ++LILI C G A F + + + + LL L
Sbjct: 266 EGPC-PCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 324
Query: 153 NVQDAEHLMFCNKDVFPF-NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+QDA L + D P N ++ I+++ C EA ++ M +G + +
Sbjct: 325 KLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT-DQVEEAFKLLSAMRDKGFVPSLKIW 383
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSM 269
++S ++A L L+ +M R I C + V N ++ + + V +A +K M
Sbjct: 384 EVLLSRLARAGRLDDAFELYKEMSR--INCQQLVGSSNILLDGILRRGSVDEAKDFLKQM 441
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+ G+ P+ TY+ L+ LC K D+AR+ +E+++ G
Sbjct: 442 TDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L + LV A ++++ M+ G +P+V ++ LI+ K+ D ML+ G+
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKMG--CQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P Y+ + + + +++M C P +Y ++I + + R
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAF 120
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
E+ E G+ P +Y++++ + G + +A + EM K P+
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD 167
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 181/398 (45%), Gaps = 10/398 (2%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D EAA F K G T Y++MI GKV + D +EM+ P ++T
Sbjct: 145 DVEAARGLF-EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 203
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
LI +C + + + K + + L+ A C+ +Q A
Sbjct: 204 NA---LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 260
Query: 164 NKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ V N ++ +++ C IG+ +A R+ EM Q G+ ++VV+++ +I A
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCK-IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 319
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + LF +M G+ + YNA+IH K + + A+ L+ ++ +G+ P+++ Y
Sbjct: 320 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 379
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKM 339
+ I LC K++ A+ +EM + GI Y +D ++G G LL+ M+++
Sbjct: 380 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 439
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN-GNGPDRSSYTALIHALFLNGKLEE 398
+ T T+ +LI + + +N IS + G + + +TA+I L + ++E
Sbjct: 440 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 499
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
A + +M +K L+P+ L D ++ + V +A
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 537
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 23/376 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL---------VTKQTLLI 108
++G+ HS Y + IL R + A +++ EM + + V +
Sbjct: 3 RNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGV 62
Query: 109 LIRRYCAVHDVG---RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
+ + D+G AI F KRF+ GLL + D + K
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF---K 119
Query: 166 DVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
D+ + ++NI+++ C G A ++ EM RG+ D V+++ +I + K
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKE-GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 178
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
L + F++MK M E D YNA+I+ K + + + M+ G+ PNVV+Y
Sbjct: 179 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRK 338
++L+ CK + +A + + +M + G+ P TY + +D I + F L M +
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+G + TY LI + +++ ++ G P+ +SY ALIH ++
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 399 AHQYYMEMKEKQLLPE 414
A + E+K + + P+
Sbjct: 359 ALELLNELKGRGIKPD 374
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 14/270 (5%)
Query: 159 HLMFCNKDVFPFNTKSFNIILN-GWCNIIGSSREAERVWMEMSQRGICYDVVS-FSCIIS 216
H++FC + + N+ ++L+ C++ + +W S R +C F + S
Sbjct: 18 HILFCARMYYDANSVLKEMVLSKADCDVF------DVLW---STRNVCVPGFGVFDALFS 68
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
L + ++ F +MKR + + N ++H AK D K M G P
Sbjct: 69 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 128
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLL 333
V TYN +I +CK ++ AR F+EM RG+ P TY++ +D + G ++
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
E M+ M C+P TY LI F ++ + + + E+ NG P+ SY+ L+ A
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G +++A ++Y++M+ L+P T L D
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 174/451 (38%), Gaps = 83/451 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL----------IRRYCAVH 117
Y+ +I K K EM+G P++V+ TL+ I+ Y +
Sbjct: 203 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 262
Query: 118 DVGRAINAFYAYKRFKFA-------------------VGIE----DFQGLLSALCRYKNV 154
VG N Y Y A VG+E + L+ LC + +
Sbjct: 263 RVGLVPNE-YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321
Query: 155 QDAEHLMFCNKD---VFPFNTKSFNIILNGWCNIIGSSR--------------------- 190
++AE L F D V P N S+N +++G+ R
Sbjct: 322 KEAEEL-FGKMDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 379
Query: 191 ------------EAERVWM-EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
EA +V M EM + GI + + ++ ++ Y K+ N + L L D+MK +
Sbjct: 380 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 439
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDE 296
IE + +I L K +LV A+ + G+ N + ++I LCK +++
Sbjct: 440 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 499
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIK 353
A F++M+Q+G+ P Y + +D + G E L + M ++G + Y L+
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 559
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
S Q E+ G PD +++ + G ++EA + + + QLL
Sbjct: 560 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 619
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
+ L +S ++ + S + H+ Q
Sbjct: 620 SDNDNALPNIYS------DQNLVSSREHEEQ 644
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y+ +I K + D A L++E++G P L+ T I C++
Sbjct: 334 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF---IWGLCSLEK 390
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNI 177
+ A K + L+ A + N + HL+ K++ +F +
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 450
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C S+ + + G+ + F+ +I K + LF+QM +
Sbjct: 451 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 510
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ DR Y +++ K V +A++L M E G+ +++ Y SL+ L +L +A
Sbjct: 511 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 570
Query: 298 RQAFDEMLQRGISP 311
R +EM+ GI P
Sbjct: 571 RSFLEEMIGEGIHP 584
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 9/302 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y +I L + A L +M P+L + L I +
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL---IHGFVKAK 354
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
++ RA+ K + + + LC + ++ A+ +M K+ N+ +
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++ + G+ E + EM + I VV+F +I K + + K + F+++
Sbjct: 415 TLMDAYFKS-GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473
Query: 237 -MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G++ + ++ A+I L K V+ A +L + M +KG+ P+ Y SL+ K +
Sbjct: 474 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 533
Query: 296 EARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
EA D+M + G+ + Y + L ++ LE M G P I ++
Sbjct: 534 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 593
Query: 353 KK 354
KK
Sbjct: 594 KK 595
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 142/278 (51%), Gaps = 4/278 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+P N FNI+++G+C I G A V+ E+S+RG+ VVSF+ +IS Y +++N+ +
Sbjct: 222 YPPNVYLFNILMHGFCKI-GDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L M+ I D Y+A+I+ L K V++A L M E G+ PN VT+ +LI
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPT 344
CK K+D A + F+ M RGI P + TY+A ++ + R G+ E LL M G +P
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
T+ L+ + + ++ + + E G D ++TALI L +G++ +A +
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
+M P+ T ++ D K V+ LK Q
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQ 498
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 19/327 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC---- 163
IL+ +C + DV A F R + F L+S CR KNV++ L
Sbjct: 231 ILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESE 290
Query: 164 --NKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ DVF +++ ++NG C SR EA ++ EM + G+ + V+F+ +I
Sbjct: 291 RISPDVF-----TYSALINGLCK---ESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K + LR F+ MK GI D YNA+I+ L + +K+A L+ M G P+ +
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESM 336
T+ +L+ CK +D A + D M++ GI + A + + R G + +L+ M
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P + TY M+I F + K+ E+ +G P +Y AL++ G++
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ A M +++P T +L D
Sbjct: 523 KNAKMLLHAMLNMEVVPNDITFNILLD 549
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 153/368 (41%), Gaps = 46/368 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY + ++ ++ K+ A + DE+ PS+V+ TL I YC +V
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTL---ISGYCRSKNV 277
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP----FNTK 173
+ + + + + L++ LC+ V++A L C + P F T
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337
Query: 174 ------------------------------SFNIILNGWCNIIGSSREAERVWMEMSQRG 203
++N ++NG C G +EA ++ EM G
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRD-GDLKEARKLLNEMIGNG 396
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
D ++F+ ++ K ++ L + D+M GIE D + A+I L + V+DA
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
++K M G P+ TY +I CK + + EM + G P + TY+A ++
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ LL +M M P + T+ +L+ + + FK++N E G D
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFN--GEKGLVSDY 573
Query: 381 SSYTALIH 388
+SYTAL++
Sbjct: 574 ASYTALVN 581
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 176/406 (43%), Gaps = 56/406 (13%)
Query: 19 RNKIEECGIKVSSELVSEVL--------SWVRNDW-EAAFTFFLWAGKQSGYAHSTREYH 69
R+ ++E KVS ELV EVL S R + + A+ FF+WAG+Q GY HST Y+
Sbjct: 124 RHALDEMRPKVSIELVREVLFRIVVSVDSVNRERYPKLAYKFFIWAGQQEGYQHSTSMYN 183
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG---RAINAF 126
++ + + + W L +EM + P V+ +T +LI CA VG R + F
Sbjct: 184 LVMKVFAECGEVKAMWRLFEEM-AAKGLP--VSSRTFHLLI---CASVKVGLRRRLVERF 237
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
F + PF +FN IL I
Sbjct: 238 IRSSTFNYR---------------------------------PFRN-AFNAILYTLLTIE 263
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
S E V +M G DV++++ ++ L + +L D+M + G+ D Y
Sbjct: 264 QYSL-IEWVHEKMILEGYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTY 322
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++H L KG A++L+ M + G PNV+ + +LI L +A L+ R FDEM++
Sbjct: 323 NLLLHVLGKGDKPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMK 382
Query: 307 RGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P + Y + + G EE + M G P TY +I+ +F
Sbjct: 383 KGCDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDK 442
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
F + ++ +G P+ S Y++L+ L GK +A+ M +K
Sbjct: 443 AFTMLKDMDSHGCTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDK 488
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 147/344 (42%), Gaps = 45/344 (13%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F T AL DEMR P + + +L R +V V R AYK F +A E
Sbjct: 121 FSTRHAL-DEMR-----PKVSIELVREVLFRIVVSVDSVNRERYPKLAYKFFIWAGQQEG 174
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
+Q +T +N+++ + G + R++ EM+
Sbjct: 175 YQ---------------------------HSTSMYNLVMKVFAEC-GEVKAMWRLFEEMA 206
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+G+ +F +I K +++ F + R +NA+++ L L
Sbjct: 207 AKGLPVSSRTFHLLICASVKVGLRRRLVERFIRSSTFNYRPFRNAFNAILYTL----LTI 262
Query: 261 DAISLMKSMEEK----GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ SL++ + EK G +P+V+TYN +++ KLD+ Q DEM + G++P + TY
Sbjct: 263 EQYSLIEWVHEKMILEGYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTY 322
Query: 317 HAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ L ++ G++ LL M +GC+P + LI R ++E+ +
Sbjct: 323 NLLLHVLGKGDKPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMK 382
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD YT +I + G+ EEA +++ +M + LP T
Sbjct: 383 KGCDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYT 426
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM ++G DVV ++ +I+ Y A + R FD M G + YN++I L
Sbjct: 379 EMMKKGCDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVG 438
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
A +++K M+ G PN Y+SL++ L A K +A M +G
Sbjct: 439 EFDKAFTMLKDMDSHGCTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDKG 489
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 27/226 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY+ Y+ ++ + K D L+DEM P L T LL H +
Sbjct: 279 GYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLLL---------HVL 329
Query: 120 GRAINAFYAYKRFKFA--VG----IEDFQGLLSALCRYKNVQDAEHLM------FCNKDV 167
G+ A + VG + F L+ L R N++ + C+ DV
Sbjct: 330 GKGDKPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDV 389
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ +++ + G EA+R + +M RG +V +++ +I K
Sbjct: 390 V-----CYTVMIASYV-AAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKA 443
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+ M G + VY++++ L A +++K M +KG
Sbjct: 444 FTMLKDMDSHGCTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDKG 489
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEE 328
+++G + YN ++K + ++ + F+EM +G+ + RT+H + ++ G
Sbjct: 171 QQEGYQHSTSMYNLVMKVFAECGEVKAMWRLFEEMAAKGLPVSSRTFHLLICASVKVGLR 230
Query: 329 VFGLLESMRK--MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+ +R +P + + ++ Q+ + V ++ G PD +Y +
Sbjct: 231 RRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNVV 290
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ A ++ GKL++ HQ EM + L P+ T LL
Sbjct: 291 LRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLL 325
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 163/361 (45%), Gaps = 27/361 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMR-GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T++ K ++ A L + M+ GG+ P+LVT +LI YC +VG +
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYS---VLIDCYCKSGEVGEGLGLL 208
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+R + + L+SA C +++ L + V P N +++ ++ G
Sbjct: 209 EEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSP-NVVTYSCLMQGL-G 266
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G REA + +M+ RG+ DVV+++ + K +++ D M + G E
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN V++ L K + DA +++ M +KG P+ VTYN+L+K LC A K+ EA + +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLE------------SMRKMGCQPTNDTYIMLI 352
L +H D+ + GL + SM +MG Q TY LI
Sbjct: 387 LS-------EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI 439
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + R+ K+W E+G P+ +Y+ +I+ L L A + +MK+ +
Sbjct: 440 EGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR 499
Query: 413 P 413
P
Sbjct: 500 P 500
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 128/257 (49%), Gaps = 9/257 (3%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY--DVVSFSCIISCYSKARNLH 225
F N + N++L G+C G +A ++ +M + C D V+++ +++ + KA+ L
Sbjct: 108 FGVNVYNLNLVLKGFCR-SGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLA 166
Query: 226 KVLRLFDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ LF+ MK+ G +C + Y+ +I K V + + L++ ME +G+ +V Y+S
Sbjct: 167 EARVLFEAMKKGG-DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMG 340
LI C ++ R+ FDEML+R +SP + TY + + RTG E +L+ M G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P Y +L + + G+ KV + + + G P +Y +++ L ++++A
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 401 QYYMEMKEKQLLPEPKT 417
M +K P+ T
Sbjct: 346 GVVEMMVKKGKKPDAVT 362
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 39/362 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G T Y+ ++ L K + D A+ +++ M P VT TLL + C
Sbjct: 318 QKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL---KGLCGAG 374
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ A++ + KF V DVF N
Sbjct: 375 KIHEAMDLWKLLLSEKFHV---------------------------KPDVFTCNN----- 402
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G C G +A R+ M + G+ ++V+++ +I Y AR L + L+L+
Sbjct: 403 LIQGLCKE-GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + Y+ +I+ L K +++ A L M++ G+ P V+ YN+L+ LC+ L++A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
R F EM + + +++ +D ++ G+ LL M M P T+ +LI +
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
FS+ ++ ++ G+ P + +L+ L G+ E+ +M +K ++ +
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLD 641
Query: 415 PK 416
K
Sbjct: 642 SK 643
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M++RG +V + + ++ + ++ K + LF QMKR Y+ V+
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN--------YDCVV-------- 146
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYH 317
P+ VTYN+L+ CKA++L EAR F+ M + G P + TY
Sbjct: 147 -----------------PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYS 189
Query: 318 AFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D ++GE E GLLE M + G + Y LI F ++++E+
Sbjct: 190 VLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRR 249
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ +Y+ L+ L G+ EA + +M + + P+ +L D
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLAD 298
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
T ++I C + + A F K + D+ L+++LCR +++ A L
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Query: 165 KDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
++V + SFNII++G G + A+ + EM + D V+FS +I+ +SK
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKA-GDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGM 587
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L + + L+++M G V+++++ + ISL+ M +K V + ++
Sbjct: 588 LDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTST 647
Query: 284 LIKPLCK-ARKLD 295
++ LC +R LD
Sbjct: 648 ILACLCHMSRNLD 660
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + +NI++N +C GS R+A+ ++ E+ +RG+ VSF+ +I+ K+RNL +
Sbjct: 219 FPPKVQYYNILINKFCKE-GSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
RL M+ I D Y+ +IH L K + A L M+++G+ PN +T+ +LI
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPT 344
++R++D A + +ML G+ P + Y+ L+ + + G+ + L++ M+ +G +P
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI + + + ++ ++E G D ++TALI +G++ +A +
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
EM E + P+ T ++ D K V+ LK Q
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD- 166
ILI ++C + A F ++ F L++ LC+ +N+ + L ++
Sbjct: 228 ILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEEN 287
Query: 167 -VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
++P + +++++++G C G AE+++ EM QRG+ + ++F+ +I ++R +
Sbjct: 288 RIYP-DVFTYSVLIHGLCKE-GRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + QM MG++ D +YN +++ L K V A L+ M+ G+ P+ +TY +LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
CK L+ A + M + G+ + A + R G + L M + G +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + TY M+I + + FK+ E+ NG+ P +Y L++ L G+++ A+
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 403 YMEMKEKQLLPEPKTDELL 421
M + P+ T +L
Sbjct: 526 LEAMLNLGVTPDDITYNIL 544
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 5/255 (1%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K + D A L DEM+ P+ +T LI + A+N ++
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT---FTALIDGQYRSRRMDSAMNTYH 352
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNII 186
+ + LL+ LC+ +V A L+ K V + ++ +++G+C
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE- 411
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G A + M++ G+ D V+F+ +IS + + + R +M G++ D Y
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
VI K VK L+K M+ G P V+TYN L+ LCK ++ A + ML
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 307 RGISPTIRTYHAFLD 321
G++P TY+ L+
Sbjct: 532 LGVTPDDITYNILLE 546
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 14/351 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I + R + A A +EM G L + +I Y + + A + F
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEML--SQGIQL-NEAVFCSIISGYASAGNNEAAEHWFE 225
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+K G + ++ A C+ N++ E L+ ++ F N + +LNG+ I
Sbjct: 226 KFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI- 284
Query: 187 GSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
R+ E+ + + G+ ++ CI+ ++KA N+ K L + ++M + G+ ++
Sbjct: 285 ---RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 341
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+Y ++ A+G A + + M G+ P++VTYN L+ CKA ++D+A +
Sbjct: 342 MIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLEN 401
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ + PTI TY + LD G + LE ++ G +P +Y L+ ++ RQ
Sbjct: 402 IQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 461
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
N + +E+ NG P+ SYTAL G +E+A + MK++ L
Sbjct: 462 MENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENL 512
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + +I++G+ G A +VW +M G+ D+V+++ ++ + KA + K L +
Sbjct: 340 NKMIYAMIMDGYARG-GDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGV 398
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ ++ + + Y +++ KG ++ A+ + ++ G+ P VV+YNSL+ L K
Sbjct: 399 LENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 458
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
AR+++ AR DEML G+ P R+Y A + R G E+ FG+ + M+K
Sbjct: 459 ARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVA 518
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y L+K + +V+ +I++ G +R +Y ++ G+L +A +M+
Sbjct: 519 YGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQ 578
Query: 408 E 408
+
Sbjct: 579 K 579
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +GI + F IIS Y+ A N F++ K + VYN+++ A +
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++ +L+ MEE+G N+ Y +++ + R ++ F + G+SPT TY
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310
Query: 318 AFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + +LE M K G P Y M++ ++R F FKVW ++
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 370
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD +Y L+HA G++++A ++ +LLP +T
Sbjct: 371 GLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIET 413
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 152/358 (42%), Gaps = 12/358 (3%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
REY ++ + A A + MR P++ LI Y D+ A+
Sbjct: 132 REYGLLVDFYARHGDKVAARATFEAMRASHIKPNV---HIYTSLIHAYAEARDMEGAVAC 188
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ F ++S N + AEH F +++ P +N I+ +C
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGI-VYNSIVQAYC 247
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G+ E + +M + G ++ ++ +++ +++ R+ K L F ++K G+
Sbjct: 248 QA-GNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 306
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y ++ K + A+ +++ M++ GV+PN + Y ++ + A + +++
Sbjct: 307 ATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 366
Query: 304 MLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
M+ G+ P I TY HAF R ++ G+LE+++ PT +TY ++ + +
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRM-DKALGVLENIQANRLLPTIETYTSILDGYVKGG 425
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+V++ I G P SY +L+ L ++E A EM ++P ++
Sbjct: 426 HIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERS 483
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 16/280 (5%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F A+ + ++M P +VT IL+ +C + +A+ + + IE
Sbjct: 357 FTAAFKVWEDMVSAGLKPDIVTYN---ILVHAFCKAGRMDKALGVLENIQANRLLPTIET 413
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM- 197
+ +L + ++Q A + + P S+N +L+G + +R+ E +
Sbjct: 414 YTSILDGYVKGGHIQKALEVFDRIKTAGLRP-GVVSYNSLLSG----LAKARQMENARLM 468
Query: 198 --EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM G+ + S++ + Y++A ++ K +F +MK+ + D Y A++ A K
Sbjct: 469 LDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK 528
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
++ A+ + + + + G+ N +TY +++ + +L +AR +M + G
Sbjct: 529 SGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTIC 588
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
Y +F+ R+G EEV L MR+ + TY LI
Sbjct: 589 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLI 628
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G Y+++++ L K R+ + A ++DEM P+ +++ L Y
Sbjct: 438 KTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN---ERSYTALTEGYARA 494
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
DV +A F K+ A+ I + LL A C+ +Q A + D N ++
Sbjct: 495 GDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITY 554
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+L+GW G +A + +M + G D + ++ I ++ + +V M+
Sbjct: 555 CTMLDGWARK-GELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMR 613
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+E + + Y +IH AIS + + G+ + N L+ L
Sbjct: 614 EKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 666
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 13/315 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV 167
++IR + + + +A F+ ++++ +E + L++A R + A ++M +D+
Sbjct: 35 MMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIM---EDM 91
Query: 168 F----PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
P + +FN ++N C G+ REA RV +M+ G+ D+V+ + ++S Y
Sbjct: 92 LRAAIPPSRSTFNNLINA-CGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 150
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK--GVAPNVVTY 281
K L F+ MK I D N VIH L K + AI + SM EK P+VVT+
Sbjct: 151 YSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTF 210
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRK 338
S+I ++++ + F ML GI P I +Y+A + + +E F + + M++
Sbjct: 211 TSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKR 270
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P +Y LI F R +Q +V++ + N P+ SY AL+ A NG L +
Sbjct: 271 SGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQ 330
Query: 399 AHQYYMEMKEKQLLP 413
A EM++ + P
Sbjct: 331 AVDILREMEQDGIHP 345
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
DVV+F+ II YS + +F M GI+ + YNA+I A A + K+A S+
Sbjct: 206 DVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVF 265
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
M+ G P+VV+Y SLI ++++ AR+ FD M + P + +Y+A +D +
Sbjct: 266 DEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSN 325
Query: 327 ---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ +L M + G P + L+ R+ Q N+ V + G + +
Sbjct: 326 GYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIAC 385
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ I + G+ E+A Y M+ K P+ T +L
Sbjct: 386 NSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTIL 423
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 47/374 (12%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY--KRFKFAVG 137
++ A + + M+G P TL I+I V G+AI F + KR +
Sbjct: 150 QYSKALSYFELMKGTNIRPD---TTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPD 206
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ F ++ ++D + + + + P N S+N +++ + + G +EA V
Sbjct: 207 VVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKP-NIVSYNALISAYASH-GMDKEAFSV 264
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM + G C DVVS++ +IS + +++ + +FD MKR + + YNA++ A
Sbjct: 265 FDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGS 324
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS-PTIR 314
+ A+ +++ ME+ G+ PNVV+ +L+ + + RGI TI
Sbjct: 325 NGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIA 384
Query: 315 TYHAFLDIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF----------- 361
A + GE + L SM +P + T+ +LI R ++
Sbjct: 385 CNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEML 444
Query: 362 ---------------------GNVFK---VWNEISENGNGPDRSSYTALIHALFLNGKLE 397
G + K ++N + +G PD +YTA+I+A + E
Sbjct: 445 DLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWE 504
Query: 398 EAHQYYMEMKEKQL 411
+ Y EM+ +
Sbjct: 505 KVCALYQEMEANNI 518
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 186 IGSSREAERV--WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
IGS +V WM+ +QR C ++ +I +++ + + LF +M++ + D
Sbjct: 7 IGSIEHCVQVFDWMK-NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDV 65
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ YNA+I+A + + A ++M+ M + P+ T+N+LI EA + +
Sbjct: 66 ETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKK 125
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M G+ P + T++ L ++G + E M+ +P T ++I + +Q
Sbjct: 126 MTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQ 185
Query: 361 FGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+G ++++ + E + PD ++T++IH + G++E+ + M + + P +
Sbjct: 186 YGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSY 245
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKS 456
L +Y ++++ S+ +SG V+S S
Sbjct: 246 NALIS-AYASHGMDKEAFSVFDEMKRSGFCPDVVSYTS 282
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 10/310 (3%)
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR-AINAFYAYKRFKFAVGIEDFQGL 144
A+ M P++V+ L I Y A H + + A + F KR F + + L
Sbjct: 228 AVFSTMLAEGIKPNIVSYNAL---ISAY-ASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 283
Query: 145 LSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
+S R + A + ++ N S+N +++ + + G +A + EM Q G
Sbjct: 284 ISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSN-GYLPQAVDILREMEQDG 342
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
I +VVS +++ + + + + GI + N+ I + + AI
Sbjct: 343 IHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAI 402
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DI 322
+L +SME K P+ VT+ LI C+ K +EA F EML I + Y + +
Sbjct: 403 NLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAY 462
Query: 323 IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ V L S++ GC P TY +I +S + V ++ E+ N D
Sbjct: 463 SKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDS 522
Query: 381 SSYTALIHAL 390
+ +AL+ A
Sbjct: 523 IACSALMKAF 532
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 17/288 (5%)
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-F 168
I Y + + +AIN + + + F L+S CR ++A D+
Sbjct: 389 IGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRI 448
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P +++ ++ ++ + G +AE ++ + G C D+V+++ +I+ YS + KV
Sbjct: 449 PLSSEIYSSMICAYSKQ-GQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVC 507
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN------VVTYN 282
L+ +M+ I+ D +A++ A KG + + L + M+EKG+ N +++
Sbjct: 508 ALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSAC 567
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ 342
S+++ KA L + ++ G TI FL E + L +G
Sbjct: 568 SILRDWRKATDLINLMEPSFHLVSLG---TINHLLQFLGKSGKTEIMIKLFYRFVALGSS 624
Query: 343 PTNDTYIMLIKKF---SRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+TY +L+K +WR++ V + W +++ G P + Y ++
Sbjct: 625 VNINTYSILLKNLLSAGKWRKYIEVLQ-W--MNDAGIQPSHAMYNNIL 669
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 174/395 (44%), Gaps = 23/395 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++++L D A + +R P+ T +L+ + R V R
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP 195
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNG 181
A F F + I DF LC+ + +A L M C+ DV +N+ +++G
Sbjct: 196 APNVFTFNIVI-DF------LCKQGELVEARALFVRMKAMGCSPDVVTYNS-----LIDG 243
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ G E E + EM + G DVV+++ +I+C+SK + K F +MKR+G+
Sbjct: 244 Y-GKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ + + A K LV++A+ L M +G+ PN TY SL+ CKA +LD+A
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRW 358
DEM+ +G+ P + TY +D + + G+ +L M + G + Y LI
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + NE+ G D S Y LI L KL+EA +M + L P
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ D ++ K E + +L P SG V++
Sbjct: 483 TTIMD-AFFKAGKESEAVALLHKIPDSGLQPNVVT 516
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 163/361 (45%), Gaps = 12/361 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG A Y+ +I K + A++ EM+ ++VT T + +C
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF---VDAFCKE 317
Query: 117 HDVGRAINAFYAYKRFKFAVGIE-DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
V A+ F A R + + E + L+ C+ + DA L+ ++ + P N
Sbjct: 318 GLVREAMKLF-AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP-NVV 375
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++++G C G A+ V M + G+ + + ++ +I + +N + L L ++
Sbjct: 376 TYTVMVDGLCKE-GKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G+E D +Y +I L K + + +A SL+ M++ G+ PN V Y +++ KA K
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGK 494
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
EA ++ G+ P + TY A +D + + G E + MR++G P Y
Sbjct: 495 ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT 554
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + + NE+ + G D+ YT+LI G L+ A +M E
Sbjct: 555 LIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614
Query: 411 L 411
L
Sbjct: 615 L 615
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 41/370 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y+++I GK + + L+ EMR +VT L+ ++ +
Sbjct: 226 KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWI 285
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTK 173
+A + F KR + + A C+ V++A L F + + P N
Sbjct: 286 E---KAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL-FAQMRVRGMMP-NEF 340
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +++G C G +A + EM +G+ +VV+++ ++ K + +
Sbjct: 341 TYTSLVDGTCKA-GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+R G++ + +Y +IH + + A+ L+ M+ KG+ +V Y +LI LCK +K
Sbjct: 400 MERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQK 459
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
LDEA+ LL M G +P Y ++
Sbjct: 460 LDEAKS--------------------------------LLHKMDDCGLRPNTVIYTTIMD 487
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F + + + ++I ++G P+ +Y ALI L G + EA ++ +M+E L P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547
Query: 414 EPKTDELLQD 423
+ L D
Sbjct: 548 NVQVYTTLID 557
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIIL 179
RA++ K + + + L+ LC+ + + +A+ L+ D NT + I+
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+ + G EA + ++ G+ +VV++ +I KA ++++ + FD+M+ +G+
Sbjct: 487 DAFFKA-GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ + +VY +I K + A+ LM M +KG++ + V Y SLI K L A
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFA 605
Query: 300 AFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+M++ G+ + Y F+ + +E G+L M G P Y LI+K+
Sbjct: 606 LKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQ 665
Query: 357 RWRQFGNVFKVWNEI 371
+ + NE+
Sbjct: 666 KLGNMEEASSLQNEM 680
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++ ++ LA L+ DA+ + + + V PN T N ++ L + R+ R+ F+ +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194
Query: 305 LQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+P + T++ +D + + GE E L M+ MGC P TY LI + + +
Sbjct: 195 ----PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
V + +E+ ++G D +Y ALI+ G +E+A+ Y+ EMK
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMK 296
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 12/258 (4%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+EM+NK E + + L+ + + D + L G +T Y T++
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSL---LHKMDDCGLRPNTVIYTTIMDAF 489
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K K A AL+ ++ P++VT L I C + AI+ F +
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCAL---IDGLCKAGSIYEAISHFDKMRELGLD 546
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREA 192
++ + L+ C+ ++ A HLM N+ V + + +++G G + A
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLM--NEMVDKGMSLDKVVYTSLIDGHMKQ-GDLQGA 603
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ +M + G+ D+ ++C IS + + + + +M GI D+ YN +I
Sbjct: 604 FALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRK 663
Query: 253 LAKGRLVKDAISLMKSME 270
K +++A SL ME
Sbjct: 664 YQKLGNMEEASSLQNEME 681
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 98/226 (43%), Gaps = 6/226 (2%)
Query: 18 MRNKIEECGIKVSSELVSEVL-SWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
+ +K+++CG++ ++ + + ++ ++ + E+ L SG + Y +I L
Sbjct: 466 LLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLC 525
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
K A + D+MR P++ Q LI +C + + +A++ ++
Sbjct: 526 KAGSIYEAISHFDKMRELGLDPNV---QVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSL 582
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERV 195
+ L+ + ++Q A L + + + ++G+CN+ +EA V
Sbjct: 583 DKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNM-NMMQEARGV 641
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
EM GI D +++C+I Y K N+ + L ++M+ + C
Sbjct: 642 LSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSSC 687
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 181/351 (51%), Gaps = 15/351 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + Y ++I+ + K K + A ++++M+ P+ VT TL I YC
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL---IDGYCNK 354
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ +A R + + L+ AL + +A+ ++ + + P ++ +
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP-DSIT 413
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI++NG+C G++++A + EM +GI +V+++ +I SK + LF+++
Sbjct: 414 YNILINGYCRC-GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472
Query: 235 KRMGIECDRKVYNAVIHA-LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
R G D ++NA+I A G L + A +L+K M+++ + P+ VTYN+L++ C+ K
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDR-AFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
++EAR+ EM +RGI P +Y+ + + G+ + F + + M +G PT TY
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
LI+ + +Q ++ E+ G PD S+Y +LI + GK++++ +
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSE 639
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 179/399 (44%), Gaps = 24/399 (6%)
Query: 100 LVTKQTLL--ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
L TK +++ +LIR C + A F K IE F +LS + +
Sbjct: 161 LGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLK---LNQT 217
Query: 158 EHLMFCNKDVFPFNTKS----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
E + ++F KS FNI++N C G ++A+ M G+ +VV+++
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKE-GKLKKAKDFIGSMENLGVKPNVVTYNT 276
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + + D MK G+E D Y ++I + KG +++A +++ M+E G
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
+ P VTYN+LI C L +A DEM++R I PT+ TY+ + + +E
Sbjct: 337 LLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEAD 396
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
G+++ M G P + TY +LI + R F + +E+ G P +YT+LI+ L
Sbjct: 397 GMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVL 456
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS----- 445
+++ A + ++ + P+ L D ++R A LK ++
Sbjct: 457 SKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDE 516
Query: 446 -GQNT----RVISKKSDQDREFLQQPETRRVVRHQGFSF 479
NT R K ++ RE L++ + RR +R S+
Sbjct: 517 VTYNTLMQGRCREGKVEEARELLKEMK-RRGIRPDHISY 554
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 162/366 (44%), Gaps = 16/366 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G ++ M+++ K+ + +T W L EM + ++ T I+I C
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFN---IMINVLCKE 249
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ +A + + + + + ++ C V+ A ++ N+ V P ++ +
Sbjct: 250 GKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP-DSYT 308
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++G C G EA + +M + G+ V+++ +I Y +L K D+M
Sbjct: 309 YGSLISGMCKG-GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R I YN +IHAL + +A ++K M + G+ P+ +TYN LI C+
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII------RTGEEVFGLLESMRKMGCQPTNDTY 348
+A DEM+ +GI PT+ TY + + ++ + +++F E + + G P +
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF---EKIIREGASPDLIMF 484
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI F + E+ + PD +Y L+ GK+EEA + EMK
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544
Query: 409 KQLLPE 414
+ + P+
Sbjct: 545 RGIRPD 550
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG + Y+ +I + A+ L DEM P+LVT +L+ ++ + +
Sbjct: 404 DSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR---N 460
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ A + F R + + F L+ C N+ A L+ +++ P + ++
Sbjct: 461 RMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP-DEVTY 519
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++ G C G EA + EM +RGI D +S++ +IS YSK +++ + D+M
Sbjct: 520 NTLMQGRCRE-GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G YNA+I L K + A L+K M KG+ P+ TY SLI+ + K+D
Sbjct: 579 SIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVD 635
Query: 296 EARQAFD 302
++ +A D
Sbjct: 636 DSSEASD 642
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 38/208 (18%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
VKD + ++ + + ++ LI+ C+ ++ D+A + FD M ++G+ P I T++A
Sbjct: 147 VKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNA 206
Query: 319 FLDI---------------------IRTGEEVFGLL-----------------ESMRKMG 340
L + I++ F ++ SM +G
Sbjct: 207 MLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLG 266
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY +I + + V + + G PD +Y +LI + GKLEEA
Sbjct: 267 VKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEAS 326
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNK 428
+MKE LLP T L D NK
Sbjct: 327 GILEKMKEIGLLPTAVTYNTLIDGYCNK 354
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 12/369 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
KFD A+ L EM PS+V +L I + ++ I F+ + + +
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAK---MNKFDIVIYLFHKMENLGISHDLY 651
Query: 140 DFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSS-REAERVWM 197
F L+ CR A L+ K F + + +LNG+C G+ +EA +
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQ--GNRFQEAVSLVD 709
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M++ G+ +VV ++ +I+ K R+L+ L +F M++ GI D YN +I L
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
DA L++ M ++ + PNV+ + +LI K L EA+ + EM++R + P I TY+
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829
Query: 318 AFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ ++ R G+ + + M GC P TY LI F + ++ + K++ E++
Sbjct: 830 SLINGFCIQGRLGDAKH-MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
G D +Y LIH GKL A + + M + + P+ T +L D N +E+
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEK 948
Query: 434 QIASLKAHQ 442
+ ++ Q
Sbjct: 949 ALVMVEDLQ 957
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 11/370 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S +++ + +F A +L+D M P++V T+ I C D+
Sbjct: 680 GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTV---INGLCKNRDL 736
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ FY ++ + L+S LC DA L+ + + P N F
Sbjct: 737 NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP-NVIFFTA 795
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ + G+ EA+ ++ EM +R + ++++++ +I+ + L +FD M
Sbjct: 796 LIDTFVKE-GNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G D YN +I K + V+D + L M +G+ + TYN+LI C+A KL+ A
Sbjct: 855 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ F+ M+ G+ P I TY+ LD + E+ ++E ++K TY ++I+
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + + ++ ++ G D +Y +I L NG EA + MKE +P
Sbjct: 975 MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Query: 415 PKT-DELLQD 423
+ DE L+D
Sbjct: 1035 ERIYDETLRD 1044
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 170/369 (46%), Gaps = 21/369 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +H + +I + + A +++ +M PS+VT +LL +C + +
Sbjct: 95 GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLL---HGFCLRNRI 151
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + + + + L+ LC+ +V A L+ K + ++N
Sbjct: 152 HDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNT 211
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L G C G R+A R+ +M++R I DV +F+ +I + K NL + L+ QM +
Sbjct: 212 LLTGLC-YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 238 GIECDRKVYNAVIHALA-KGRL--VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
I + YN++I+ L GRL K LM S KG PNVVTYN+LI CK+R++
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS---KGCFPNVVTYNTLINGFCKSRRV 327
Query: 295 DEARQAFDEMLQRGISPTIRTY----HAFLDI--IRTGEEVFGLLESMRKMGCQPTNDTY 348
++ + F M + G+ TY H + + +R +++F + S G P T+
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVS---CGVTPDIITH 384
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+L+ + G+ +N++ +Y +IH L K+EEA + + +
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444
Query: 409 KQLLPEPKT 417
+ + P+ +T
Sbjct: 445 EGVKPDART 453
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 179/394 (45%), Gaps = 47/394 (11%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPS 99
+RN AF+ + + +SGY + Y+T+I L K + A L++EM + G
Sbjct: 147 LRNRIHDAFSL-VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAAD 205
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
LVT TLL + C + +A + + + F L+ A + N+ +A+
Sbjct: 206 LVTYNTLLTGL---CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Query: 160 L--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L + P NT ++N ++NG C + G A++ + M+ +G +VV+++ +I+
Sbjct: 263 LYKQMLQSSIGP-NTVTYNSLINGLC-MHGRLYHAKKTFDLMASKGCFPNVVTYNTLING 320
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA---LAKGRLVKDAISLMKSMEEKGV 274
+ K+R + ++LF +M R G+ D YN +IH + K R+ KD S M S GV
Sbjct: 321 FCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSC---GV 377
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE 334
P+++T+ L+ LC ++ A F++M R+GE+ G++
Sbjct: 378 TPDIITHCILLHGLCVNGEIGSAMVKFNDM-------------------RSGEKYLGIV- 417
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
Y ++I + + ++++ + G PD +YT +I L NG
Sbjct: 418 ------------AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
EA + + MKE ++ + + L + + N+
Sbjct: 466 PRREADELFRRMKEDGIICQAEDGHLGEHGTNNQ 499
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI +D+ SF+ +I C+ + L L + +M ++G + + +++H
Sbjct: 90 QMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRN 149
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTY 316
+ DA SL+ SM + G PNVV YN+LI LCK ++ A + +EM ++G ++ + TY
Sbjct: 150 RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTY 209
Query: 317 HAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ L + +GE + +L M K P T+ LI F + +++ ++ +
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ 269
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ GP+ +Y +LI+ L ++G+L A + + M K P T
Sbjct: 270 SSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVT 313
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 10/234 (4%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A +++EM Q VV F+ +++ + R V+ QM+ GI D + +I
Sbjct: 48 DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H + + A+S++ M + G P++VT+ SL+ C ++ +A M++ G
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167
Query: 311 PTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQP----TNDTYIMLIKKFSRWRQFGN 363
P + Y+ +D + +V LL M K G T +T + + WRQ
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + ++++ PD ++TALI A G L+EA + Y +M + + P T
Sbjct: 228 ILR---DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY--- 316
+DA+ L M + P+VV + L+ + R+ + +M GIS + ++
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 317 -HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
H F R +L M K+G P+ T+ L+ F + + F + + ++G
Sbjct: 107 IHCFCRCSRL-SLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
P+ Y LI L NG + A + EM++K
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK 199
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 145/318 (45%), Gaps = 15/318 (4%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
LI CA D+ RA+ F + + + L+ LCR + A +M
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ D++ ++NII+NG C + G+ +A V + +G DV +F+ +I Y K
Sbjct: 416 CHPDIW-----TYNIIINGLCKM-GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRL 469
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L L+L ++M GI D YN+V++ L K K+ + M KG PN +TYN
Sbjct: 470 KLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN 529
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKM 339
LI+ CK +L+EA M Q G+ P +++ + R G + + L + + +
Sbjct: 530 ILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G T DT+ +LI +S K++ E+ G PD +Y L+ L ++ A
Sbjct: 590 GYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ + EM K +P T
Sbjct: 650 YAHLAEMISKGFVPSMAT 667
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 42/315 (13%)
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
A + + L+ LC+ VQ+A + N+ P + ++N I++G+C G +EA
Sbjct: 277 APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP-DDFTYNTIIDGYCKS-GMLQEA 334
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ + +G D V++ +I+ ++ + L LF++ + ++ D VYN+++
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR-------------------- 292
L + L+ A+ +M M E+G P++ TYN +I LCK
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454
Query: 293 ---------------KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLE 334
KLD A Q + M GI+P + TY++ L+ + + G +EV E
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M GC+P TY +LI+ F + Q V + ++G PD S+ LIH NG
Sbjct: 515 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574
Query: 395 KLEEAHQYYMEMKEK 409
L+ A+ + ++ EK
Sbjct: 575 DLDGAYLLFQKLDEK 589
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 14/283 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K+ A ++++ P + T TL I YC + A+
Sbjct: 423 YNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL---IDGYCKRLKLDSALQLVE 479
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIILNGWC 183
+ A + + +L+ LC+ ++ E ++ K P N ++NI++ +C
Sbjct: 480 RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL--KGCRP-NAITYNILIENFC 536
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I EA V + M Q G+ D VSF+ +I + + +L LF ++ G
Sbjct: 537 KI-NQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 595
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N +I A + ++ A + M KG P++ TY L+ LCKA +D A E
Sbjct: 596 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655
Query: 304 MLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQP 343
M+ +G P++ T+ L+++ E ++ M +MG P
Sbjct: 656 MISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 12/275 (4%)
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
+A HL +DVFP + +FN +L+ C G E+ + ++ +RG+ + + +
Sbjct: 194 NARHLFDEMLGRDVFP-DVATFNNVLHALCQK-GDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 214 IISCYSKARNLHKVLRLFDQMKRMG--IECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
I + L + + L ++RMG + D YN ++ L K V++A + M
Sbjct: 252 WIRGLCEDGRLEEAVAL---VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
+G P+ TYN++I CK+ L EA + + + +G P TY + ++ + G E
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L + +P Y L+K R + +V NE+ E G PD +Y +I+
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
L G + +A + K LP+ T L D
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 40/288 (13%)
Query: 166 DVF--PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
D+F P ++N I++ N +A +V++ M G+ D + + + +
Sbjct: 98 DLFACPPAAPAYNAIMDALVNA-AYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
H LRL + G + Y V+ L +A L M + V P+V T+N+
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGIS--------------------------------- 310
++ LC+ + E+ ++L+RG+S
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYV 276
Query: 311 -PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY+ + + +E L M GC P + TY +I + + +
Sbjct: 277 APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + G PDR +Y +LI+ L G +E A + + E + K L P+
Sbjct: 337 LLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ +Y A I A A+ ++ A+ + M+ P YN+++ L A D+A + +
Sbjct: 71 QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYV 130
Query: 303 EMLQRGISPTIRTYHAFL-DIIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
ML G++P RT+ L TG LL S+ + GC Y +++
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
N +++E+ PD +++ ++HAL G + E+
Sbjct: 191 HGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMES 230
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 168/361 (46%), Gaps = 20/361 (5%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
SG+ + Y +++ L K + D A L+ EM P LVT ILI C
Sbjct: 320 SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYS---ILIHGLCKQGK 376
Query: 119 VGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDA----EHLMFCNKDVFPFN 171
V +AI YK F + G+L LC + DA + L+ N + P +
Sbjct: 377 VQQAIQL---YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSN--LRP-D 430
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+NI+++G+ + G EA R++ + + I +V+F+ +I + K R + + RL
Sbjct: 431 VTLYNIMIDGYVKL-GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ +K G+E Y +++A + + L+ M K + P VVTY +IK LCK
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTY 348
RKL+E+ Q ++M +G++P TY+ + +++ F LL+ M +PT TY
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+LI R+ + +V + + + +YT +I A + G + A + + +M E
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Query: 409 K 409
K
Sbjct: 670 K 670
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 173/402 (43%), Gaps = 46/402 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-- 114
K SG S R ++ L +F A + + G E PS+V+ T++ RYC
Sbjct: 142 KDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIM---SRYCKL 198
Query: 115 AVHDVGRAINAF----------YAYKRFKFAVGIE-------------DFQGLLSALCRY 151
+ DV ++ Y+Y + + + QGL + Y
Sbjct: 199 GLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTY 258
Query: 152 KNVQDAEHL-------------MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
K V HL M ++ + P + ++ +++ G C + G+ EA R+ +
Sbjct: 259 KIVAKGFHLLGLMSGAREIIQKMLTDEGLKP-DLVTYTVLICGHCQM-GNIEEALRLRRD 316
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ G +V+ +S ++S K + + L+L +M+ ++ D Y+ +IH L K
Sbjct: 317 LLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGK 376
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+ AI L K M + PN ++ ++K LC+ L +AR FD ++ + P + Y+
Sbjct: 377 VQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D ++ G EE L + +R P+ T+ LI F + R+ ++ I +G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P +YT L++A G + + H+ +EM K + P T
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT 538
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 8/330 (2%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P LVT +LI +C + ++ A+ F + + + LLS+LC+ V +A
Sbjct: 289 PDLVTYT---VLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
L++ + + +++I+++G C G ++A +++ EM I + + S I+
Sbjct: 346 LQLLYEMEANNLQPDLVTYSILIHGLCKQ-GKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ L FD + + D +YN +I K V++A+ L K + +K + P
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESM 336
++VT+NSLI CK RK+ EAR+ + + G+ P+ TY ++ + L E +
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524
Query: 337 RKMG---CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+M +PT TY ++IK + R+ ++ ++ G PD+ +Y +I
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ +A + +M L P P T +L D
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLID 614
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 161/393 (40%), Gaps = 45/393 (11%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V E LS D+ A F+ + + G+ HS + +L + R+F ++D+M
Sbjct: 34 VIENLSVQNADFVA--DFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQ 91
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCR--- 150
E +V HD A+ K I+ + LL L
Sbjct: 92 EEVASRMV---------------HD---ALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDI 133
Query: 151 ----YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG--I 204
Y +++D+ P + ++ +II++G C G SR + V G
Sbjct: 134 MWDVYNDIKDSGT---------PQSARTSSIIVDGLC---GQSRFRDAVLFLRQNDGKEF 181
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VVSF+ I+S Y K F M + GI D YN +IH L +++A+
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML-QRGISPTIRTYHAFL-DI 322
L ME++G+ P++VTY + K + AR+ +ML G+ P + TY +
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGH 301
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G EE L + G Q Y +L+ + Q ++ E+ N PD
Sbjct: 302 CQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+Y+ LIH L GK+++A Q Y EM ++ P
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 45/313 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ MI K+ + A L +R PS+VT +L I +C V A
Sbjct: 434 YNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL---IYGFCKNRKVVEARRLLE 490
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNI 185
+ K + L++A C N+ L+ KD+ P ++ +++ G C
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEP-TVVTYTVVIKGLCKQ 549
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
E+ ++ +M +G+ D ++++ II C+ KA+++ K L D M +E
Sbjct: 550 -RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPAT 608
Query: 246 YNAVIHALAKGRLVKDA-----------------------------------ISLMKSME 270
YN +I L + V+DA + + M
Sbjct: 609 YNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMV 668
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--E 327
EKG ++ Y+++I LCK ++EA+ F ML G+SP + L+ R G
Sbjct: 669 EKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVH 728
Query: 328 EVFGLLESMRKMG 340
VF LL M K G
Sbjct: 729 SVFELLAVMIKFG 741
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 114/262 (43%), Gaps = 11/262 (4%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + K G S Y T++ + + L+ EM + P++VT ++I+
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT---VVIK 544
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
C + ++ + A + ++ C+ K+++ A L+ D+ N
Sbjct: 545 GLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL---DDMLIHN 601
Query: 172 TK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ ++N++++G C G +A+RV + + R I V+++ +I + + +
Sbjct: 602 LEPTPATYNVLIDGLCRY-GDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA 660
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+++F QM G E K Y+AVI+ L K L+ +A M GV+P+ + ++
Sbjct: 661 VKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNA 720
Query: 288 LCKARKLDEARQAFDEMLQRGI 309
+A + + M++ G+
Sbjct: 721 FHRAGHVHSVFELLAVMIKFGL 742
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
R V + ++ R+V DA+ ++ M+E+ + P++ TYNSL+ L R D ++
Sbjct: 83 RLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYN 139
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
++ G + RT +D + + +R+ + + + SR+ + G
Sbjct: 140 DIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLG 199
Query: 363 --NVFK-VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+V K + + + G PD SY LIH L + G +EEA + +M+++ L P+ T
Sbjct: 200 LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVT 257
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 7/370 (1%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + + +I K +K D A L D+M P+ VT ++I YC V
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN---VMIEGYCLVG 527
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP-FNTKSFN 176
++ +A + ++ L+S LC V A + ++ + N S
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L G G E +W EM+ RG+ D+VSF+ I+ K + K LF +MK
Sbjct: 588 ALLYGLFRE-GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I AL+K + A++ M G +PN VT+ LI LCK+ L
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGS 706
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRT-GE-EVFGLLESMRKMGCQPTNDTYIMLIKK 354
A EML + P TY+ FLD T G+ E L S G + ++ +LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKG 766
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + +I+E+G PD SY+ +IH L G + +A + + EM K L P+
Sbjct: 767 LCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 415 PKTDELLQDW 424
+ W
Sbjct: 827 VVAYNIFIRW 836
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 13/310 (4%)
Query: 107 LILIRRYCAVHDV-GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CN 164
L+ IR++ D+ + + + + + GI A C +N+ A L+
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIR-------AYCESRNLDGARGLVVRME 225
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ + +N+++ G C + +EA V M G+ D V++ ++ + + L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNM-RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
LR+ M R+G + +I L K LV++A SL + + G+ PNV YN+L
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
I LCK + D+A + F EM RG+ P TY + + + G E+ L + MR G
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ T Y LI + + + + + + G P +SY+ LI L NG L A +
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464
Query: 402 YYMEMKEKQL 411
+ EM E+ +
Sbjct: 465 LHREMAERGI 474
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA + ++ G+ +V +++ +I K RLF +M G+E + Y +I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
HAL K +++DA+ L M +KG+ V YNSLI CK LD AR M++ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 311 PTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT +Y + + R G+ L M + G N T+ LI F + ++ ++
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++ ++ P+ ++ +I L G + +A Q Y +M E L P+ T
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 30/348 (8%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+ R H MI LG V +IDE+R E LV + L C + D+G
Sbjct: 287 ALRITHDMIR-LGFVPSEANCSFMIDELRKKE----LVEEAFSLA-----CKLGDLGMVP 336
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNG 181
N F + L+ LC+ + DA+ L + + P N ++ I+++
Sbjct: 337 NVF-------------AYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAILIHA 382
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G +A ++ +M +GI V ++ +I+ Y K +L + L M + G+
Sbjct: 383 LCKR-GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y+ +I L + + A+ L + M E+G+A N T+ +LI CK +K+DEA + F
Sbjct: 442 TAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Query: 302 DEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
D+M+ + P T++ ++ ++ + F L + M +MG +P N TY LI
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+ ++ + + S TAL++ LF G+ E + + EM
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D + NT + +++N C G AE + EM + + +++C + ++ ++
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L M + G +N +I L K +++AI LM+ + E G +P+ ++Y+++I
Sbjct: 741 KAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQ 342
LCK +++A + ++EML +G+ P + Y+ F+ ++ ++ G+ +M + G Q
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 343 PTNDTYIMLIKKFS 356
P DTY L+ S
Sbjct: 860 PNWDTYRALLSGIS 873
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 144 LLSALCRYKNVQDAEHLMFCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ LC+ + AE + C + +V P N ++N L+ + G +A+ + M
Sbjct: 694 LINNLCKSGYLGSAE--LLCKEMLAGNVLP-NKFTYNCFLDYFATE-GDMEKAKDLHSAM 749
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q G +VSF+ +I KA + + + L ++ G D Y+ +IH L K +
Sbjct: 750 LQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A L M KG+ P+VV YN I+ + D+A + M++ G+ P TY A
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 320 LDII 323
L I
Sbjct: 869 LSGI 872
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY+ +T + +I L K +A L EM G P+ T L + D+
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL---DYFATEGDM 739
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+A + A + A I F L+ LC+ +Q+A LM + F + S++ I
Sbjct: 740 EKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTI 798
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++ C + G +A +W EM +G+ DVV+++ I + K L ++ M R G
Sbjct: 799 IHELCKM-GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 239 IECDRKVYNAVIHALA 254
++ + Y A++ ++
Sbjct: 858 VQPNWDTYRALLSGIS 873
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 3/167 (1%)
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEV 329
G+ N T + ++ L K R+ AR FD+MLQ G+ Y A + R +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
GL+ M G + + Y +L+ + + +V N + G D +Y L++
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
+LE A + +M +P + D K+ VE +
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 173/398 (43%), Gaps = 50/398 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I K R F A+ L+DEM P T +I+ C D GR +A
Sbjct: 36 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT---IIKGLC---DNGRVDSALV 89
Query: 128 AYKRFK--FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
Y+ + A + + L+ ALC+ + DA ++ P N ++N ++NG+C
Sbjct: 90 HYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP-NVVTYNTLINGFC 148
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+G+ EA ++ +M + DV +++ +I Y K +L +M + G E +
Sbjct: 149 K-LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207
Query: 244 KVYNAVIHALAKGRLVKDAISLMKS----------------------------------- 268
YN ++ +L K DA +L +
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-- 326
M ++G P++ TYN +I C+A ++D+ARQ + M + G P + TY++ + +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
+E + + E +R G T LI + R+ + K+ E+ NG+ PD +YT
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
LIH +L+++ ++ EM +K +P T ++ D
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 425
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 20/285 (7%)
Query: 144 LLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
LLSA R K Q+A L C+ D ++T ++NG+C ++A R+
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYST-----LINGFCKA-RDFQQAYRLLD 57
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAK 255
EM +RGI ++ II + L + M+R C V Y ++ AL K
Sbjct: 58 EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR---HCAPSVITYTILVDALCK 114
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ DA +++ M E G APNVVTYN+LI CK +DEA F++ML+ SP + T
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174
Query: 316 YHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ +D E + LL+ M K GC+P TY L+ + ++ + F + +
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P ++ +I G+L+ A++ + M ++ LP+ T
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 12/306 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G A + Y+T+I K+ D A L ++M P + T ILI YC
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN---ILIDGYCKQE 186
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSF 175
++ + L+ +L + DA +L M +D P + +F
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF-TF 245
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N++++ +C + G A ++ M+ RG D+ +++ +IS +A + +L ++M
Sbjct: 246 NLMIDMFCKV-GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G D YN+++ L K V +A + + + G +VVT ++LI LCK+R+LD
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 296 EARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A + EM + G +P + Y H F + ++ M GC PT TY ++
Sbjct: 365 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQL-DKSLAFFSEMLDKGCVPTVITYSIV 423
Query: 352 IKKFSR 357
I K +
Sbjct: 424 IDKLCK 429
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K K+ A+ L M + PS T ++I +C V + A F
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN---LMIDMFCKVGQLDLAYELFQ 266
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNG 181
I + ++S CR + DA L+ C DV +N+ I++G
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS-----IVSG 321
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C EA V+ + G DVV+ S +I K+R L +L +M+R G
Sbjct: 322 LCKA-SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y +IH K + +++ M +KG P V+TY+ +I LCK+ ++ +
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 440
Query: 302 DEMLQRGI 309
ML+RG+
Sbjct: 441 KTMLERGV 448
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 164/360 (45%), Gaps = 15/360 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + Y+ ++ L K + D A L+ EM P V+ TL I C +
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL---ISSLCKL 229
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A F + + L++ +C+ ++A L+ NK + P N S
Sbjct: 230 GKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP-NVIS 283
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I+N + G+ + V +M RG ++ +F+ +I + H+ L +D+M
Sbjct: 284 YTTIINALSDA-GNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R G+ + YNA++H L R + DA+S+ ME G PNV TY++LI KA L
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
D A + ++ M+ G P + Y +D++ + + L+E+M+ C P T+
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
IK + KV++++ +G P+ ++Y L+ +L + + EA +M+ + +
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 161/395 (40%), Gaps = 41/395 (10%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------- 107
+ S Y+ +I + K F+ A+ L+DEM P++++ T++
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301
Query: 108 ----ILIRRYCA--VHDVGRAINAFY----AYKRFKF---------AVGIEDFQGLLSAL 148
+ R C+ +H I F+ +++ F + + L+ L
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361
Query: 149 CRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
C +++ DA + F ++ P N ++++ +++G+ G A VW M G
Sbjct: 362 CSKRSLGDAVSV-FNQMEINGCCP-NVRTYSALIDGYAKA-GDLDGASEVWNWMITHGCH 418
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+VV+++C++ + ++ L + M+ + +N I L V AI +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
M G PN TYN L+ L K R+ EA +M RGI + TY+ +
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538
Query: 326 GEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ LE + KM G +P T ++I + + + ++ + +S PD +
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT+LI + + +EEA Y M + + P T
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 186 IGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
+ S RE + V +M GI F +I Y +A + + L+ F +M+ ++
Sbjct: 86 LASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPT 145
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
K+YN ++ AL + + +M++ G+ PNV TYN L+K LCK ++D A +
Sbjct: 146 VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLV 205
Query: 303 EMLQRG------------------------------ISPTIRTYHAFLDII---RTGEEV 329
EM +G +P++ Y+A ++ + T EE
Sbjct: 206 EMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEA 265
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F LL+ M G P +Y +I S V ++ G P+ ++T+LI
Sbjct: 266 FQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKG 325
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLP 413
FL G EA ++ M + ++P
Sbjct: 326 FFLKGGSHEALDFWDRMIREGVVP 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ +L + F+ A+ LI+ M+ P+ VT T I+ C V AI F
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF---IKGLCGSGRVDWAIKVFD 480
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWC 183
+ LL +L + + +A L+ KD+ N ++N I+ G+C
Sbjct: 481 QMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV---KDMEHRGIELNLVTYNTIIYGYC 537
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G EA + +M RG D ++ + +I Y K ++ ++L D++ D
Sbjct: 538 -CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y ++I + V++AI ++ M +G++PNV T+N L++ L A Q D
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
S ++ L I + E G L S+ MG
Sbjct: 657 ------SSIMQPKFVVLIITK---EAGGQLHSVSSMG 684
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I LA R + L++ M+ +G++ + + S+I +A ++A + F M
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQ 138
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLL----ESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ PT++ Y+ LD + E F ++ +M+K G +P TY +L+K + +
Sbjct: 139 DFRVKPTVKIYNHILDAL-LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
K+ E+S G PD SYT LI +L GK++EA + M + + +
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVC 257
Query: 422 QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSD 457
+++++ + F K P T +I+ SD
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F L+ LC+ + DA L+ + FP N FN I++ C G S EA
Sbjct: 13 FGILVDGLCKANRLTDAFELVEVMGERGCFP-NALVFNGIMDALCKE-GRSAEAYGFIET 70
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M G+ +V+++ +I + K LH+ L + +M G E + YN +H L K
Sbjct: 71 MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA++L ++M EK + +V Y +LI LC+A KL EA DEM G P Y+A
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 319 FLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + G E L + M G P T+ M++ + R + + + ++ G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
P Y LI AL G++ EA++ EM + L P +T L++
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMR 297
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M+++G VV+F ++ KA L L + M G + V+N ++ AL K
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A +++M GV+P +VTYN LI CK KL A + EM RG P TY+
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 319 FL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
FL + + G ++ L +M + + Y LI + + + + +E+ +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P Y A++ L ++ EAH+ + M +LP+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPD 219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ ++ L K + DA L++ M E+G PN + +N ++ LCK + EA + M
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETM 71
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQF 361
G+SPTI TY+ +D E++ LE +++M G +P + TY + ++ +
Sbjct: 72 RSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++ ++E D YT LI L GKL EA+ EM+ +P+P +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAI 191
Query: 422 QDW 424
W
Sbjct: 192 LSW 194
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 168/367 (45%), Gaps = 10/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I L K R+ A+ + EM P++VT +L+ + + C V
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+N K + ++ ALC+ V +A + M ++ V P N ++N
Sbjct: 205 TTLMNEMVDSKIMP---DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP-NVVTYNA 260
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C + A +V+ M + +V+S++ +I+ Y K +++ K + LF++M R
Sbjct: 261 LMDGHC-LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 319
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + YN +IH L ++DAISL M +G P++VTY +L LCK R LD+A
Sbjct: 320 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 379
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ P I+ Y LD + R GE + L ++ G QP TY ++I
Sbjct: 380 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ K+++E+++NG P+ +Y + N + + EM + +
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499
Query: 415 PKTDELL 421
T LL
Sbjct: 500 VSTTTLL 506
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 174/398 (43%), Gaps = 43/398 (10%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA TF KQ ST +++ ++ + K + T +L +M P + T
Sbjct: 28 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV---YT 82
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L I+I C ++ V A +A L+ + + + DA
Sbjct: 83 LAIVINSLCHLNRVDFAFSA-------------------LAKILKLGHQPDA-------- 115
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+F ++ G C + G EA ++ +M G +VV++ +I+ K R +
Sbjct: 116 -------TTFTTLIRGLC-VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ +F +M GI + YN++IH L K K +LM M + + P+V T N+++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRTGEEV-FGLLESMRKMGCQ 342
LCK + EA D M+ RG+ P + TY+A +D +R +V + ++M C
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+Y LI + + + ++ E+S P+ +Y LIH L G+L++A
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ EM + +P+ T L D+ + +++ +A LKA
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 32/375 (8%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST ++ ++ + K++ + T +L +M P + TL ILI +C + +G A
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV---YTLNILINSFCHLRRLGYAF 636
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCR------------YKNVQDA-------EHLM--- 161
+ + F + + L++ LC+ Y ++ A +H+
Sbjct: 637 SVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 696
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
N + P N F+ +++ C G A V M +RG+ DVV+++ ++ +
Sbjct: 697 NEMVNSKIMP-NVVVFSTVVDALCKE-GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 754
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
+ + +++FD M G + + YN +I+ + + + A+ L++ M +G+ + V
Sbjct: 755 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 814
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESM 336
TYN+LI LC +L A F EM+ G P + TY LD + E LL+++
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
Y + I R + +++ +S G PD +Y +IH L G L
Sbjct: 875 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 934
Query: 397 EEAHQYYMEMKEKQL 411
+EA++ + +M E +
Sbjct: 935 DEANKLFRKMDENDI 949
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 24/308 (7%)
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVF--PFNTKSFNIILNGWCNI--IGSSREAERV 195
DF LL+++ + K+ L D F P + + NI++N +C++ +G A V
Sbjct: 583 DFTKLLTSIAKMKHYSTVLSLS-TQMDSFGIPPDVYTLNILINSFCHLRRLG---YAFSV 638
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
++ + G DVV++ +++ K M GI D YN++IHAL
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCN 685
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
K +L+ M + PNVV +++++ LCK + A D M++RG+ P + T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745
Query: 316 YHAFLD--IIRTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y A +D +R+ +E + ++M GC P +Y +LI + + ++ + ++S
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
G D +Y LIH L G+L+ A + EM +P+ T +L D+ +
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865
Query: 433 RQIASLKA 440
+ LKA
Sbjct: 866 EAMVLLKA 873
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 40/356 (11%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T LIR C +G A++ F F + + L++ LC+ + V +A ++
Sbjct: 117 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEM 176
Query: 163 CNKDVFPFNTKSFNIILNGWCNII----------------------------------GS 188
K + P N ++N +++G C + G
Sbjct: 177 ITKGISP-NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 235
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EA V M RG+ +VV+++ ++ + + +++FD M + YN
Sbjct: 236 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 295
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I+ K + V A+ L + M + + PN VTYN+LI LC +L +A F EM+ RG
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 309 ISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
P + TY D + R ++ LL+++ P Y ++ R + +
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+++ +S G P+ +Y +IH L G L EA + + EM + P T L+
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 471
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%)
Query: 69 HTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+T++ L K A ++D M RG E P++VT L+ +C ++V A+ F
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVE--PNVVTYNALM---DGHCLRNEVDVAVKVF 278
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
+ + L++ C+ ++V A +L +++ P NT ++N +++G C+
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP-NTVTYNTLIHGLCH 337
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+ G ++A ++ EM RG D+V++ + K R+L K + L ++ + D +
Sbjct: 338 V-GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y ++ + + ++DA L ++ KG+ PNV TYN +I LCK L EA + F EM
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456
Query: 305 LQRGISPTIRTYHAFL-DIIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFS 356
+ G SP TY+ +R E + LLE M G T +L+ S
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 511
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 147/403 (36%), Gaps = 61/403 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+ L K R D A AL+ + G P + T+L C ++ A + F
Sbjct: 363 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL---DGMCRAGELEDARDLFS 419
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + ++ LC+ + +A L NK+ N ++N+I G+
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA------------------------- 221
+ R E + EM RG DV + + ++ S
Sbjct: 480 EALRTIE-LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMR 538
Query: 222 ---------------------RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
L L F++M M + ++ ++AK +
Sbjct: 539 SLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYS 598
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+SL M+ G+ P+V T N LI C R+L A ++L+ G P + TY +
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658
Query: 321 DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ GL + + K G P TY LI ++ +V + NE+ + P+
Sbjct: 659 N---------GLCKMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 708
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
++ ++ AL G + AH M ++ + P+ T L D
Sbjct: 709 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 751
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 38/218 (17%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + R Y+ +I ++++ D A L+++M VT TL I C V +
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL---IHGLCHVGRL 829
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
AI F+ + ++ LL LC+ ++ +A L+
Sbjct: 830 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA---------------- 873
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
I GS+ +A+ + ++ G+C +A L LF + G+
Sbjct: 874 -----IEGSNLDADILVYNIAIDGMC--------------RAGELEAARDLFSNLSSKGL 914
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ D + YN +IH L K L+ +A L + M+E + N
Sbjct: 915 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 170/374 (45%), Gaps = 12/374 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L + D + +EM G P+ T +L IR C V
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSL---IRGLCGVGKFLEGFGLVD 244
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
R V + F L+ LC+ + +A + N+ P N + ++ G+C +
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEP-NIVTCTALMGGYC-L 302
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ A ++ + + G DV +++ I Y K + +R+FD+M R G+ +
Sbjct: 303 KGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT 362
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++I L K V A ++K+M G+ P++VT L+ LCK+++LD+A F++++
Sbjct: 363 YNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422
Query: 306 QRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G++P + +Y H R GE + LL M P TY LI R +
Sbjct: 423 ESGLTPDVWSYTILIHGCCTSRRMGEAM-NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 481
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
N +++ NE+ G PD +Y+ L+ AL+ L+EA + +M ++ L P+ ++
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541
Query: 422 QDWSYNKQFVERQI 435
D + ++ I
Sbjct: 542 IDGYCKSERIDEAI 555
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 12/369 (3%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAV 116
+G + Y ++I L V KF + L+DEM RG + V+ +LI C
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLD-----VSVYVFTVLIDGLCKN 268
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD-VFPFNTKSF 175
+ A F + I L+ C NV A L + F + ++
Sbjct: 269 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTY 328
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+ ++G+C + G R+A RV+ EM + G+ ++V+++ +I C KA + + M
Sbjct: 329 NVFIHGYCKV-GRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R G+ D ++ L K + + AI L + E G+ P+V +Y LI C +R++
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA +M + + P I TY +D + R+G + LL M G P TY +L+
Sbjct: 448 EAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILL 507
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + ++N++ + G PD YT +I + +++EA + EM K L+
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 567
Query: 413 PEPKTDELL 421
P+ T +L
Sbjct: 568 PDIVTYTIL 576
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 174/396 (43%), Gaps = 14/396 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + +I L K A + DEM P++VT L+ YC +V
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM---GGYCLKGNV 306
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F A + F + + + C+ V+DA + C + V P N ++N
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP-NIVTYNS 365
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G A + M + G+ D+V+ ++ K++ L + + LF+Q+
Sbjct: 366 LIDCLCKA-GEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y +IH R + +A++L++ M K + P++VTY+ LI LC++ ++ A
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 484
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+ +EM +G P TY LD + E VF L M K G +P Y ++I
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF-LFNQMIKRGLEPDVMCYTIMID 543
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + ++ E+ PD +YT L +A+F +G ++++ + + P
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG--SNSYEWKFVNVIRDINP 601
Query: 414 EPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNT 449
P+ + L ++ + +AS A S Q +
Sbjct: 602 PPRVLKYLAALCKSEHLDYKCLASEFASYAGSLQTS 637
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 81/215 (37%), Gaps = 17/215 (7%)
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
C+ ++ +F ++ + G D N V+ L V A+ + G +
Sbjct: 81 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140
Query: 277 NVVTYNSLIKPLCKARKLDEARQAF-----------DEMLQRGISPTIRTYHAFLD-IIR 324
N V+Y LI LC+ +++EA D +G + Y +D + R
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCR 197
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G +E F M G P TY LI+ +F F + +E+ G
Sbjct: 198 NGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYV 257
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+T LI L NG L EA + + EM + P T
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVT 292
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 162/359 (45%), Gaps = 11/359 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G++ S+ ++ + +L K D W E G + + I I+ +C +V
Sbjct: 68 GHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY----LGRTQFDVYSFWITIKAFCENGNV 123
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNI 177
+ + + + + L+ A CR ++ A+ +MF D N + I
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK-VMFSRMDDLGLAANQYIYTI 182
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+ G ++ ++ +M G+ ++ +++ +I+ Y + L ++FD++ +
Sbjct: 183 MINGFFKK-GYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ C+ YN +I L + V A L++ M+ + P T+N L+ LC +LD+A
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+++ G+ PT+ TY+ + + V L+ M G P+ TY +L+
Sbjct: 302 LSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNT 361
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F R +++++ + G PD+ +Y LIH L + G + EA + Y M E L P
Sbjct: 362 FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
F+ SF I + +C G+ + + +M G+ +V ++ +I + ++ +
Sbjct: 105 FDVYSFWITIKAFCEN-GNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKV 163
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +M +G+ ++ +Y +I+ K KD L + M+ GV PN+ TYNSLI C
Sbjct: 164 MFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYC 223
Query: 290 KARKLDEARQAFDEMLQRG-----------------------------------ISPTIR 314
+ KL A + FDE+ +RG I+PT R
Sbjct: 224 RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR 283
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
T++ +D + TG ++ LE ++ +G PT TY +LI FS+ V ++ E+
Sbjct: 284 TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM 343
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ G P + +YT L++ + +E+A++ + MK L+P+ T +L
Sbjct: 344 EDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVL 393
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 45/324 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y MI K + L +M+ P+L T +L I YC +
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL---ITEYCRDGKL 228
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + A + L+ LCR V AE L+ + P T++FN+
Sbjct: 229 SLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP-TTRTFNM 287
Query: 178 ILNGWCNI----------------------------------IGSSREAERVWMEMSQRG 203
+++G CN +G+S + EM RG
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDA 262
I V+++ +++ + ++ ++ K +F MKR+G+ D+ Y +IH L KG +V +A
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV-EA 406
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
L KSM E + PN V YN++I CK +A + +EM++ G++P + +Y + + I
Sbjct: 407 SKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQI 466
Query: 323 I-RTGEEVFG--LLESMRKMGCQP 343
+ + G+ + LL+ M + G +P
Sbjct: 467 LCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I A + V L+ ME GV+PNV Y LI+ C+ +D+A+ F M G+
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
+ Y ++ + G ++ F L + M+ +G P TY LI ++ R + FK
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
V++EIS+ G + +Y LI L G++ +A MK + P +T +L D
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 427 NKQFVERQIASLK 439
N +++ ++ L+
Sbjct: 294 NTGQLDKALSYLE 306
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 15/379 (3%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
+++ T+ ++ K++ + TA +LI P + TL I+I C + +
Sbjct: 8 KDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDV---HTLTIVINCLCHLKHTVFGFSV 64
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCN 184
A + + F L++ LC NV A +D+ + N+ + I+NG C
Sbjct: 65 LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124
Query: 185 IIGSSREAERVWMEMSQRGICYDV-VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G + A ++ R +D+ +++S I+ K L L F M GI+ D
Sbjct: 125 V-GDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDL 183
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN++IH L +A +L+ +M KG+ PNV T+N L+ CK K+ A+
Sbjct: 184 VAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCF 243
Query: 304 MLQRGISPTIRTY------HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
M+ G+ P + TY H L + +VF E M G P TY LI + +
Sbjct: 244 MVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVF---ELMIHKGLLPNVVTYSSLIHGWCK 300
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
R V +E+ NG D +++ LI G+ E A + + M E LP +T
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT 360
Query: 418 DELLQDWSYNKQFVERQIA 436
++ D + QF I+
Sbjct: 361 CAIILDGLFKCQFHSEAIS 379
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 168/367 (45%), Gaps = 9/367 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY ++ + T+I L KV A + ++++ G G L+ + ++ C +
Sbjct: 107 GYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYS--TIMDSLCKDGML 164
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+N F + + L+ LC + +A L+ K + P N ++FN+
Sbjct: 165 CLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMP-NVQTFNV 223
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ +C G A+ + M G+ DVV+++ +IS + ++ +++F+ M
Sbjct: 224 LVDNFCKE-GKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHK 282
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + Y+++IH K R + AI ++ M G+ +VVT+++LI CKA + + A
Sbjct: 283 GLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAA 342
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ F M + P ++T LD + + E L M KM + TY +++
Sbjct: 343 IELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDG 402
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ +F + ++++ + G D +YT +I L G L++A M+M+E P
Sbjct: 403 MCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPN 462
Query: 415 PKTDELL 421
T +L
Sbjct: 463 EFTYNVL 469
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 67/344 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L +++ A L+ M P++ QT +L+ +C + RA
Sbjct: 186 YNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNV---QTFNVLVDNFCKEGKISRA----K 238
Query: 128 AYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNG 181
F VG+E + ++S C + DA + + +K + P N +++ +++G
Sbjct: 239 TIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLP-NVVTYSSLIHG 297
Query: 182 WC---NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA----------------- 221
WC NI +A V EM G+ DVV++S +I + KA
Sbjct: 298 WCKTRNI----NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353
Query: 222 --RNLH----------------KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
NL + + LF +M++M +E + YN V+ + DA
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL--- 320
L + KG+ +VV Y ++IK LCK LD+A +M + G P TY+ +
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473
Query: 321 ----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
DI R+ + L M+ G T +LI FS ++
Sbjct: 474 LQRYDISRSTK----YLMLMKGKGLSADATTTELLISYFSANKE 513
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 12/361 (3%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E+ ++ L K++ + TA +L +M P+LVT L ILI +C + + + +
Sbjct: 67 EFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT---LNILINCFCHLGQMAFSFSVL 123
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ + H F +K V F N S+ +LNG C
Sbjct: 124 GKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH--FHDKVVAQGFQMNQVSYGTLLNGLC 181
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G +R A ++ + R DVV +S II K + +++ F +M GI +
Sbjct: 182 KI-GETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNV 240
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ +I + A SL+ M K + PNV TYN LI LCK K+ EA++ E
Sbjct: 241 ITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAE 300
Query: 304 MLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +G + TY++ LD + + ++ L M+K G QP TY LI + +
Sbjct: 301 MHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGR 360
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
N K++ + G D +Y +I L G ++A +M++ +P T ++
Sbjct: 361 LKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDI 420
Query: 421 L 421
+
Sbjct: 421 I 421
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + NI++N +C++ G + V ++ + G D ++ + ++ + + L
Sbjct: 99 NLVTLNILINCFCHL-GQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHF 157
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D++ G + ++ Y +++ L K + A+ L++ +E++ P+VV Y+++I LCK
Sbjct: 158 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCK 217
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEV--FGLLESMRKMGCQPTNDT 347
+ +++A F EM RGI P + TY + G+ + F LL M P T
Sbjct: 218 DKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYT 277
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + K+ E+ G D +Y +++ L + L++A +M+MK
Sbjct: 278 YNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMK 337
Query: 408 EKQLLPEPKTDELLQD 423
+ + P T L D
Sbjct: 338 KWGIQPNKYTYTALID 353
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
++ F I+ K ++ + L QM+ GIE + N +I+ + + S++
Sbjct: 65 IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G P+ +T N+L+K LC ++ + D+++ +G +Y L+ + + G
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184
Query: 327 EE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E LL + +P Y +I + + + ++E++ G P+ +Y+
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYS 244
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
LI L G+L A EM K + P T +L D + K+ ++ L A
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILID-ALCKEGKVKEAKKLLAEMHH 303
Query: 445 SGQNTRVISKKSDQD 459
GQ V++ S D
Sbjct: 304 KGQPADVVTYNSVLD 318
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 24/370 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + + ++ GK R +T +L++EM P++ T + ++ R
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGR------A 277
Query: 120 GRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSF 175
GR A KR + + + L+ ALC + DA L K + ++
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337
Query: 176 NIILNGW--CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+L+ + C +G +E W EM G DV++F+ +++ KA N+ + L D
Sbjct: 338 ITMLDKFSDCGDLGRVKE---FWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDV 394
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M++ G+ + YN +I L + + DA+ L +ME GV P TY I K+ +
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDT 347
D+A + F++M RGI+P I +A L +R + +F L+S G P + T
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS---NGLAPDSVT 511
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y M++K +S+ Q ++ +++SEN PD +LI+ L+ G+++EA + + +K
Sbjct: 512 YNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLK 571
Query: 408 EKQLLPEPKT 417
+ +L P T
Sbjct: 572 DMKLAPTVVT 581
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 160/337 (47%), Gaps = 15/337 (4%)
Query: 23 EECGIKVSSE---LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+E G+K + E + E V ND E A+ F K +G A Y+ ++ GK
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHND-EMAWNLFTEM-KNAGCAPDVFTYNLLLDAHGKSG 839
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
K + + L ++M P+ +T I+I + + +A++ FY F+
Sbjct: 840 KINELFELYEQMICSSCKPNTITHN---IIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL L + +++A+ L + P N +NI++NG+ G A ++
Sbjct: 897 TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRP-NNAIYNILINGFGKT-GDVNTACELFK 954
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M + GI D+ S++ ++ C +A + L F+++K+ G+ D YN +I L +
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+++A++L M+ +G+ P++ TYNSLI L A +++A + ++E+ G+ P + TY+
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 318 AFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
A + + + + + + M GC P T+ L
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 180/430 (41%), Gaps = 61/430 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y +I L K D A L +M+ P VT T+L ++
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML---DKFSDC 347
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKS 174
D+GR + + +A + F L++ALC+ N+ +A HL+ + V P N +
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLP-NLHT 406
Query: 175 FNIILNGWCNI----------------------------------IGSSREAERVWMEMS 200
+N +++G + G S +A + +M
Sbjct: 407 YNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Query: 201 QRGICYDVVSFSCIISCYSKAR--NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
RGI ++V+ C S YS A L + +F+++K G+ D YN ++ +K
Sbjct: 467 IRGIAPNIVA--CNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +AI L+ M E P+++ NSLI L KA ++DEA + F + ++PT+ TY+
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584
Query: 319 FLDIIRTGEE-----VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
I G+E L SM GC P T+ ++ + + K+ +++
Sbjct: 585 L--IAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTT 642
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK---------QLLPEPKTDELLQD- 423
PD ++ +IH L + ++ +A + +MK+ LLP + L++D
Sbjct: 643 MNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDA 702
Query: 424 WSYNKQFVER 433
+ + FV R
Sbjct: 703 FKIAEDFVHR 712
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 4/250 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ ++ II G I G R+ + +M + G + S++ +I ++ + L +
Sbjct: 158 DLNTYLIIFKGLF-IRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEM 216
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ +M G++ K ++A++ A K R + SL++ ME G+ PN+ TY I+ L +
Sbjct: 217 YRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGR 276
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDT 347
A ++DEA + M G P + TY +D + T ++ L M+ +P T
Sbjct: 277 AGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVT 336
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
YI ++ KFS G V + W+E+ +G PD ++T L++AL G ++EA M+
Sbjct: 337 YITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR 396
Query: 408 EKQLLPEPKT 417
++ +LP T
Sbjct: 397 KQGVLPNLHT 406
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 192 AERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A+ V++ ++ G+ + S++ +I + N LF +MK G D YN ++
Sbjct: 773 AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLL 832
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
A K + + L + M PN +T+N +I L K+ LD+A F +++ S
Sbjct: 833 DAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFS 892
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
PT TY LD ++++G EE L E M GC+P N Y +LI F + ++
Sbjct: 893 PTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACEL 952
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + G PD SYT+L+ L G++++A Y+ ++K+ L + L+ D
Sbjct: 953 FKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMID 1008
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 139/323 (43%), Gaps = 42/323 (13%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
++ LC++K A+ + F + +S+N ++ G+ + + A ++ EM
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGV-HNDEMAWNLFTEMKN 818
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G DV +++ ++ + K+ ++++ L++QM + + +N +I L K +
Sbjct: 819 AGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDK 878
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ L + +P TY L+ L K+ +L+EA++ F+EM+ G P Y+ ++
Sbjct: 879 ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938
Query: 322 -----------------IIRTG---------------------EEVFGLLESMRKMGCQP 343
++R G ++ E +++ G
Sbjct: 939 GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ Y ++I R + +++E+ G PD +Y +LI L + G +E+A + Y
Sbjct: 999 DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLY 1058
Query: 404 MEMKEKQLLPEPKT-DELLQDWS 425
E++ L P T + L++ +S
Sbjct: 1059 EELQFIGLEPNVFTYNALIRGYS 1081
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 145/372 (38%), Gaps = 44/372 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G A + Y+ M+ K + D A L+ +M + P ++ +L
Sbjct: 501 KSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSL---------- 550
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
IN Y R A CR K+++ A ++ ++N
Sbjct: 551 ------INTLYKAGRVDEA---------WKMFCRLKDMKLAPTVV------------TYN 583
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G G + A ++ M+ G + ++F+ I+ C K + L++ +M
Sbjct: 584 TLIAGLGKE-GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTT 642
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
M D +N +IH L + V DAI L M+ K + P+ VT +L+ + K +++
Sbjct: 643 MNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMED 701
Query: 297 ARQAFDEMLQR-GISPTIRTYHAFLDIIRT--GEEVFGLLESMRKMGCQPTNDTYIM-LI 352
A + ++ + R G+ R + + I T G E L G + + +M +I
Sbjct: 702 AFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPII 761
Query: 353 KKFSRWRQFGNVFKVWNEIS-ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
K + +Q V+ + E G P SY LI E A + EMK
Sbjct: 762 KVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGC 821
Query: 412 LPEPKTDELLQD 423
P+ T LL D
Sbjct: 822 APDVFTYNLLLD 833
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 172/370 (46%), Gaps = 8/370 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G S Y+ ++ L ++A + + M GG+ P VT I+I+ YC
Sbjct: 210 KENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN---IMIKGYCKA 266
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSF 175
+ +A+ F + + L+ A ++ L + S+
Sbjct: 267 GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSY 326
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++++ G C EA V+ M+Q+G +V ++ +I YSK ++ + +RLF++MK
Sbjct: 327 SLVIGGLCKQ-RKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G E D Y+ +++ L K + D + L KGVA N + Y SLI L KA +++
Sbjct: 386 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 445
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A F+EM ++G + Y+A +D + + G ++ L M + GC T T+ +LI
Sbjct: 446 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 505
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + K W+++ + G P +S+ AL L L GK+ A + ++ ++
Sbjct: 506 DGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGII 565
Query: 413 PEPKTDELLQ 422
PE ++++
Sbjct: 566 PETAFEDMIN 575
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 185/394 (46%), Gaps = 20/394 (5%)
Query: 27 IKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
+K+S V+ VL V R E A FF WAGKQ Y H + ++I +L
Sbjct: 108 VKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 167
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK---FAVGIEDF 141
+ E++ + G L+T+ LI+ + ++G + ++R K + +
Sbjct: 168 RLVFFELK--DRG-LLMTESAANSLIKSF---GNLGLVEELLWVWRRMKENGIDPSLYTY 221
Query: 142 QGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ L ++ AE + + + P +T ++NI++ G+C G ++A + +M
Sbjct: 222 NFLVNGLVNSMFIESAEKVFEVMDGGKIVP-DTVTYNIMIKGYCK-AGKLQKAMEKFRDM 279
Query: 200 SQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ + D +++ +I +CYS+ R+ L L+ +M+ G+E Y+ VI L K R
Sbjct: 280 EMKNVKPDKITYMTLIQACYSE-RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 338
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A ++ ++M +KG NV Y +LI K ++EA + F+ M G P TY
Sbjct: 339 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 398
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + ++G ++ L + R G Y LI + + + ++ E+SE G
Sbjct: 399 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 458
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
D Y A+I AL +GK+++A + M+E+
Sbjct: 459 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEE 492
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ E+ RG+ + + +I + + ++L ++ +MK GI+ YN +++ L
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
++ A + + M+ + P+ VTYN +IK CKA KL +A + F +M + + P
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY + R + L M + G + +Y ++I + R+ + V+ +
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 349
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ G + + YTALI + NG +EEA + + MK + P+ T +L
Sbjct: 350 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVL 399
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 50/313 (15%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLV 101
D++ + +L ++ G Y +I L K RK A+A+ + M +G ++
Sbjct: 303 DFDTCLSLYLEM-EERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIY 361
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T LI Y + A+ F K F + L++ LC+ + D L
Sbjct: 362 TA-----LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416
Query: 162 -FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
FC N + +++G G +AE ++ EMS++G D ++ II +K
Sbjct: 417 DFCRNKGVAINAMFYASLIDGLGKA-GRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 475
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYN--AVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + L LF +M+ G CD+ VY +I L K ++AI M +KG+ P V
Sbjct: 476 HGKIDQALALFGRMEEEG--CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTV 533
Query: 279 VTYNSL----------------------------------IKPLCKARKLDEARQAFDEM 304
++ +L I LCKA+++ EA + D +
Sbjct: 534 ASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGI 593
Query: 305 LQRG--ISPTIRT 315
+ RG I IRT
Sbjct: 594 VDRGREIPGRIRT 606
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 25/347 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG-GETGPSLVTKQTLLILIRRYCA 115
++ G A Y T+I+ KV K + A + DEM G+ P+ V L I YC
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNAL---IGGYCD 231
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
++ A+ ++ + + + L +A L+ K + P +
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAP-DAF 290
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI++NG+C G ++A +++ M +GI VV+++ +I S + + RLF+
Sbjct: 291 TYNILINGYCKE-GKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
R GI D +YNA+I++ G + A +M ME+K + P+ VTYN+L++ LC +
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL----------DIIRTGEEVFGLLESMRKMGCQP 343
LDEAR +EM +RGI P + +Y+ + D ++ +E+ G G P
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG-------KGFNP 462
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
T TY +IK Q G+ + E+ NG PD S+Y +LI L
Sbjct: 463 TLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 166/395 (42%), Gaps = 49/395 (12%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
ST ++ M+ L K A L+ +M P+ VT T+ I +CA V I
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQM----PSPNAVTYNTV---IAGFCARGRVQAGI 167
Query: 124 NAFYAYK-RFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIIL 179
+ R A + ++S C+ V+DA + M V P N +N ++
Sbjct: 168 EIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEP-NAVMYNALI 226
Query: 180 NGWCN----------------------------------IIGSSREAERVWMEMSQRGIC 205
G+C+ + G + EA + EM ++G+
Sbjct: 227 GGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLA 286
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D +++ +I+ Y K K +++F+ M GI Y ++IHAL+ +V++ L
Sbjct: 287 PDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRL 346
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDI 322
+G+ P++ YN+LI C +D A + EM ++ I+P TY+ L +
Sbjct: 347 FNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCL 406
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ +E GL+E M K G QP +Y LI +S + KV +E+ G P +
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
Y A+I L LNG+ +A EM + P+ T
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG--PSLVTKQTLLILIRRYCAVH 117
G + + Y+ + L + A AL++EM GE G P T ILI YC
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEAHALVEEM--GEKGLAPDAFTYN---ILINGYCKEG 303
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+A+ F + + L+ AL VQ+ + L + + P + +
Sbjct: 304 KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP-DLFMY 362
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++N C G A + EM ++ I D V+++ ++ L + L ++M
Sbjct: 363 NALINSHCTG-GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ GI+ D YN +I + +KDA+ + M KG P ++TYN++IK LC +
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+A EM+ GI+P TY + ++ + T +E
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 43/246 (17%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLM 266
+F+ ++ A + L L QM + YN VI A+GR V+ I +M
Sbjct: 116 TTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGR-VQAGIEIM 170
Query: 267 KSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHAFLDIIR 324
+ M E+G +AP+ TY ++I CK K+++A + FDEML G + P Y+A
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA------ 224
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
LI + + E+ + G ++Y
Sbjct: 225 --------------------------LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYN 258
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQ 444
+H LF+ G+ EAH EM EK L P+ T +L + Y K+ E++ ++K +
Sbjct: 259 LFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN-GYCKEGKEKK--AMKMFEVM 315
Query: 445 SGQNTR 450
G+ R
Sbjct: 316 VGKGIR 321
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 3/247 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N+ILN + + + + M G+ D+ +++ +IS + + +F++
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G D+ YNA++ K R ++A+ ++K ME G AP++VTYNSLI +
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEEVFGL--LESMRKMGCQPTNDTYIM 350
LDEA + +M+++GI P + TY L +TG++ + + E MR GCQP T+
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK F + KV+ EI PD ++ L+ NG E + EMK
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 496
Query: 411 LLPEPKT 417
+PE T
Sbjct: 497 FVPERDT 503
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 68/365 (18%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D++ +NT L C EA V+ EM G D V+++ ++ Y K+R
Sbjct: 290 DLYTYNT------LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + + +M+ G YN++I A A+ L+ +A+ L M +KG+ P+V TY +L+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHA----------FLDIIRTGEE------- 328
K K D A + F+EM G P I T++A F+++++ EE
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463
Query: 329 ---------------------VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
V G+ + M++ G P DT+ LI +SR F +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD-ELLQDWSY 426
+ + + G PD S+Y A++ AL G E++ + EMK+ + P T LL ++
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Query: 427 NKQFVERQIASLKAHQPQSG---------QNTRVISKKSD----QDREFLQQPETRRVVR 473
K+ VER S A + SG + ++ KSD +R FL+ +R
Sbjct: 584 GKE-VERM--SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLE-------LR 633
Query: 474 HQGFS 478
QGFS
Sbjct: 634 EQGFS 638
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 168/424 (39%), Gaps = 60/424 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ SG+A S Y+++I+ + D A L +M P + T TLL
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL------SGF 406
Query: 117 HDVGRAINAFYAYKRFKFA---VGIEDFQGLLSALCRYKNVQDA----EHLMFCN--KDV 167
G+ A ++ + A I F L+ N + E + C D+
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDI 466
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+NT NG E V+ EM + G + +F+ +IS YS+ +
Sbjct: 467 VTWNTLLAVFGQNGM------DSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520
Query: 228 LRLFDQMKRMGIECDRKVYNAVI-----------------------------------HA 252
+ ++ +M G+ D YNAV+ HA
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
A G+ V+ +L + + + P V +L+ K+ L E +AF E+ ++G SP
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640
Query: 313 IRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
I T +A + I R + +L ++ G P+ TY L+ +SR F +
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNK 428
EI G PD S+ +I A NG+++EA + + EMK+ L P+ T + + ++ +
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760
Query: 429 QFVE 432
F+E
Sbjct: 761 MFIE 764
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 157/366 (42%), Gaps = 10/366 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG A Y+T+I+ + ++ A + +EM+ P VT LL + Y
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV---YGKS 339
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
A+ + FA I + L+SA R + +A L K + P + +
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKP-DVFT 398
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +L+G+ G A +V+ EM G ++ +F+ +I + N +++++F+++
Sbjct: 399 YTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K D +N ++ + + + + K M+ G P T+N+LI +
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
D+A + ML G++P + TY+A L + G E+ +L M+ C+P TY L
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSL 577
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ ++ ++ + + EI P L+ + L E + ++E++E+
Sbjct: 578 LHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGF 637
Query: 412 LPEPKT 417
P+ T
Sbjct: 638 SPDITT 643
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 159/354 (44%), Gaps = 22/354 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSW-------VRNDWEAAFTFFLWAGKQSGYAHSTREYH 69
EM EE I E V ++++W +N ++ + K++G+ ++
Sbjct: 449 EMMKVFEEIKI---CECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 505
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
T+I+ + FD A A+ M P L T +L + R + + + A
Sbjct: 506 TLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR-GGLWEQSEKVLAEMKD 564
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
R K + S L Y N ++ E + ++++ + ++L + S
Sbjct: 565 GRCK-----PNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKS 619
Query: 190 ---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
E ER ++E+ ++G D+ + + ++S Y + R + K + + +K G Y
Sbjct: 620 DLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTY 679
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++++ ++ + + +++ + KG+ P+++++N++I C+ ++ EA + F EM
Sbjct: 680 NSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
G++P + TY+ F+ + E +++ M K GC+P +TY LI F +
Sbjct: 740 FGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCK 793
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ IIS K L ++ G+ D Y ++I A A ++A+ + K +EE
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 272 KGVAPNVVTYNSLIKPLCK-ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+G P ++TYN ++ K + D M G++P + TY+ + R G E
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + E M+ G P TY L+ + + R+ +V E+ +G P +Y +LI
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPE 414
A +G L+EA + +M +K + P+
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPD 395
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 7/247 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ + AL +E+ G P V +TL+++ + + + RA F
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERA---FL 630
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ F+ I ++S R + V E L F F + ++N ++ +
Sbjct: 631 ELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT- 689
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
++E + E+ +G+ D++SF+ +I Y + + + R+F +MK G+ D Y
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N I + A + +AI ++K M + G PN TYNSLI CK + DEA +
Sbjct: 750 NTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNL-- 807
Query: 307 RGISPTI 313
R + P++
Sbjct: 808 RNLDPSV 814
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V +I L K A SL+ + GV ++ Y SLI + EA F ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 305 LQRGISPTIRTYHAFLDII-RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ G PT+ TY+ L++ + G ++ GL++SM+ G P TY LI R
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +V+ E+ G PD+ +Y AL+ + + EA + EM+ P
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAP 359
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 3/247 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N+ILN + + + + M G+ D+ +++ +IS + + +F++
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G D+ YNA++ K R ++A+ ++K ME G AP++VTYNSLI +
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGEEVFGL--LESMRKMGCQPTNDTYIM 350
LDEA + +M+++GI P + TY L +TG++ + + E MR GCQP T+
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LIK F + KV+ EI PD ++ L+ NG E + EMK
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 496
Query: 411 LLPEPKT 417
+PE T
Sbjct: 497 FVPERDT 503
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 68/365 (18%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D++ +NT L C EA V+ EM G D V+++ ++ Y K+R
Sbjct: 290 DLYTYNT------LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + + +M+ G YN++I A A+ L+ +A+ L M +KG+ P+V TY +L+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHA----------FLDIIRTGEE------- 328
K K D A + F+EM G P I T++A F+++++ EE
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463
Query: 329 ---------------------VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
V G+ + M++ G P DT+ LI +SR F +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD-ELLQDWSY 426
+ + + G PD S+Y A++ AL G E++ + EMK+ + P T LL ++
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Query: 427 NKQFVERQIASLKAHQPQSG---------QNTRVISKKSD----QDREFLQQPETRRVVR 473
K+ VER S A + SG + ++ KSD +R FL+ +R
Sbjct: 584 GKE-VERM--SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLE-------LR 633
Query: 474 HQGFS 478
QGFS
Sbjct: 634 EQGFS 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 168/424 (39%), Gaps = 60/424 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ SG+A S Y+++I+ + D A L +M P + T TLL
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL------SGF 406
Query: 117 HDVGRAINAFYAYKRFKFA---VGIEDFQGLLSALCRYKNVQDA----EHLMFCN--KDV 167
G+ A ++ + A I F L+ N + E + C D+
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDI 466
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+NT L G E V+ EM + G + +F+ +IS YS+ +
Sbjct: 467 VTWNT------LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQA 520
Query: 228 LRLFDQMKRMGIECDRKVYNAVI-----------------------------------HA 252
+ ++ +M G+ D YNAV+ HA
Sbjct: 521 MAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHA 580
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
A G+ V+ +L + + + P V +L+ K+ L E +AF E+ ++G SP
Sbjct: 581 YANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640
Query: 313 IRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
I T +A + I R + +L ++ G P+ TY L+ +SR F +
Sbjct: 641 ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILR 700
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNK 428
EI G PD S+ +I A NG+++EA + + EMK+ L P+ T + + ++ +
Sbjct: 701 EIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDS 760
Query: 429 QFVE 432
F+E
Sbjct: 761 MFIE 764
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 157/366 (42%), Gaps = 10/366 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K SG A Y+T+I+ + ++ A + +EM+ P VT LL + Y
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDV---YGKS 339
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
A+ + FA I + L+SA R + +A L K + P + +
Sbjct: 340 RRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKP-DVFT 398
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +L+G+ G A +V+ EM G ++ +F+ +I + N +++++F+++
Sbjct: 399 YTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K D +N ++ + + + + K M+ G P T+N+LI +
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
D+A + ML G++P + TY+A L + G E+ +L M+ C+P TY L
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSL 577
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ ++ ++ + + EI P L+ + L E + ++E++E+
Sbjct: 578 LHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGF 637
Query: 412 LPEPKT 417
P+ T
Sbjct: 638 SPDITT 643
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 158/354 (44%), Gaps = 22/354 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWV-------RNDWEAAFTFFLWAGKQSGYAHSTREYH 69
EM EE I E V ++++W +N ++ + K++G+ ++
Sbjct: 449 EMMKVFEEIKI---CECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 505
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
T+I+ + FD A A+ M P L T +L + R + + + A
Sbjct: 506 TLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR-GGLWEQSEKVLAEMKD 564
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS 189
R K + S L Y N ++ E + ++++ + ++L + S
Sbjct: 565 GRCK-----PNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKS 619
Query: 190 ---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
E ER ++E+ ++G D+ + + ++S Y + R + K + + +K G Y
Sbjct: 620 DLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTY 679
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N++++ ++ + + +++ + KG+ P+++++N++I C+ ++ EA + F EM
Sbjct: 680 NSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739
Query: 307 RGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
G++P + TY+ F+ + E +++ M K C+P +TY LI F +
Sbjct: 740 FGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCK 793
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ IIS K L ++ G+ D Y ++I A A ++A+ + K +EE
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 272 KGVAPNVVTYNSLIKPLCK-ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---E 327
+G P ++TYN ++ K + D M G++P + TY+ + R G E
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + E M+ G P TY L+ + + R+ +V E+ +G P +Y +LI
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPE 414
A +G L+EA + +M +K + P+
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPD 395
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ + AL +E+ G P V +TL+++ + + + RA F
Sbjct: 574 YCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERA---FL 630
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ F+ I ++S R + V E L F F + ++N ++ +
Sbjct: 631 ELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT- 689
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
++E + E+ +G+ D++SF+ +I Y + + + R+F +MK G+ D Y
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N I + A + +AI ++K M + PN TYNSLI CK + DEA +
Sbjct: 750 NTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNL-- 807
Query: 307 RGISPTI 313
R + P++
Sbjct: 808 RNLDPSV 814
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V +I L K A SL+ + GV ++ Y SLI + EA F ++
Sbjct: 187 VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKL 246
Query: 305 LQRGISPTIRTYHAFLDII-RTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ G PT+ TY+ L++ + G ++ GL++SM+ G P TY LI R
Sbjct: 247 EEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +V+ E+ G PD+ +Y AL+ + + EA + EM+ P
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAP 359
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K + P ++FNI++NG C + G +A+ + M +G D+ +F+ +I YS +
Sbjct: 420 KGLIP-EVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L + D M G++ D YN++++ L K +D + K+M EKG APN+ T+N L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----G 340
++ LC+ RKLDEA +EM + ++P T+ +D ++ G RKM
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ TY ++I F+ K++ E+ + GPD +Y ++ G + +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 401 QYYMEMKEKQLLPEPKT 417
++ +EM E +P T
Sbjct: 658 KFLLEMMENGFIPSLTT 674
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 7/288 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ LC+ Q+AE + N+ + P ++ ++N ++ G+C G + AER+ +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP-DSYTYNTLIAGYCKG-GMVQLAERIVGD 346
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
G D ++ +I ++ L LF++ GI+ + +YN +I L+ +
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ +A L M EKG+ P V T+N L+ LCK + +A M+ +G P I T++
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ T E +L+ M G P TY L+ + +F +V + + + E G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ ++ L+ +L KL+EA EMK K + P+ T L D
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 151/376 (40%), Gaps = 69/376 (18%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D A F K+ G+ H+ Y ++I LG KF+ ++ +MR E + +
Sbjct: 17 QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR--ENVGNHM 74
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+ + ++ Y V A+N F +R F Y
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVF---ERMDF----------------YD--------- 106
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
C VF +N ++ +G+ + +A +V+M M RGI DV SF+ + + K
Sbjct: 107 -CEPTVFSYNAIMSVLVDSGYFD------QAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
H LRL + M G E + Y V+ + + L M GV+ + T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGC 341
N L++ LCK + E + D++++RG+ P + TY+ F+ + E+ G ++R +GC
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG---AVRMVGC 276
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ E G PD +Y LI+ L N K +EA
Sbjct: 277 -----------------------------LIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 402 YYMEMKEKQLLPEPKT 417
Y +M + L P+ T
Sbjct: 308 YLGKMVNEGLEPDSYT 323
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 190/507 (37%), Gaps = 101/507 (19%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR---- 66
F H S R+ IE+ G E + EVL +R + ++ G Y +
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 67 -----------------EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
Y+ ++++L FD A + MR P + + I
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV---YSFTIR 152
Query: 110 IRRYCAV---HDVGRAIN-------------------AFY-------AYKRFK--FAVGI 138
++ +C H R +N FY Y+ F A G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 139 E----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
F LL LC+ +V++ E L+ + V P N ++N+ + G C G A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP-NLFTYNLFIQGLCQR-GELDGA 270
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
R+ + ++G DV++++ +I K + +M G+E D YN +I
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
KG +V+ A ++ G P+ TY SLI LC + + A F+E L +GI P
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 313 IRTYHAFLD-------IIRTGE--------------EVFGLL-ESMRKMGCQPTND---- 346
+ Y+ + I+ + + F +L + KMGC D
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 347 ------------TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
T+ +LI +S + N ++ + + +NG PD +Y +L++ L
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
K E+ + Y M EK P T +L
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNIL 537
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 141 FQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ LL+ LC+ +D + K P N +FNI+L C EA + E
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAP-NLFTFNILLESLCRY-RKLDEALGLLEE 556
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGR 257
M + + D V+F +I + K +L LF +M+ + YN +IHA +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V A L + M ++ + P+ TY ++ CK ++ + EM++ G P++ T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 318 AFLDIIRTGEEVF---GLLESMRKMGCQP 343
++ + + V+ G++ M + G P
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 8/255 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
GY ++ +I K + A ++D M P + T +LL + + DV
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ + A + F LL +LCRY+ + +A L+ NK V P + +F
Sbjct: 516 ---METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-DAVTFGT 571
Query: 178 ILNGWCNIIGSSREAERVWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+++G+C G A ++ +M + + +++ II +++ N+ +LF +M
Sbjct: 572 LIDGFCKN-GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ D Y ++ K V + M E G P++ T +I LC ++ E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 297 ARQAFDEMLQRGISP 311
A M+Q+G+ P
Sbjct: 691 AAGIIHRMVQKGLVP 705
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 31/237 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + ++ ++ L + RK D A L++EM+ P VT T LI +C
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT---LIDGFCKNG 580
Query: 118 DVGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ A F + +K + + ++ A NV AE L ++ + P + +
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP-DGYT 639
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ ++++G+C G+ + +EM + G + + +I+C
Sbjct: 640 YRLMVDGFCK-TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLC--------------- 683
Query: 235 KRMGIECDRKVYNA--VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ +VY A +IH + + LV +A++ + +++K VA + L+K C
Sbjct: 684 ------VEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 168/417 (40%), Gaps = 92/417 (22%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTK--QTLLILIRRYCAVH--DVGRAINAFYAYK 130
L V + + A A+ R G S+VT T ILI C+ D+G A K
Sbjct: 60 LADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKK 119
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWC 183
F+ I F LL LC K DA ++ C +VF S IIL G C
Sbjct: 120 GFRVEPII--FNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVF-----SHTIILKGLC 172
Query: 184 ------------------------NII------------GSSREAERVWMEMSQRGICYD 207
N++ G +A + EM R I +
Sbjct: 173 HENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPN 232
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
VV +S II+ K + + K + + D+M + G+ + Y +++H + +AI ++
Sbjct: 233 VVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLE 292
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----------- 316
M GV PNVVTY+S + LCK + EAR+ FD M++RG+ P I TY
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEG 352
Query: 317 -----HAFLDII--------------------RTG--EEVFGLLESMRKMGCQPTNDTYI 349
H D++ + G +E + MR+ G +P TY
Sbjct: 353 ALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYS 412
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
LI + + + N ++ E+ NG P+ +Y ++ LF G+ A ++Y+++
Sbjct: 413 TLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQI 469
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
EA + A G + Y T+I L K D A+A EM P++V +
Sbjct: 179 EALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSS 238
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
+ I C + +A+ + + L+ C + +A + C
Sbjct: 239 I---IAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMC 295
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+ V P N +++ ++ C G EA +++ M +RG+ D+ ++S ++ Y+
Sbjct: 296 SNGVEP-NVVTYSSFMDYLCKN-GRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGA 353
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L ++ LFD M + ++ D V+N +I+A AK V +A+ + M ++G+ PN VTY++
Sbjct: 354 LVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYST 413
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG 326
LI CK +++ A F EM+ G+SP TY+ L + RTG
Sbjct: 414 LINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTG 457
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG---VAPNVVTYNSL 284
L +FD++ R GI + N + +A+ A+S M G V P V TY L
Sbjct: 38 LDVFDELLRRGIGAPIRSLNGALADVARDNPAA-AVSRFNRMARAGASMVTPTVHTYGIL 96
Query: 285 IKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLDII----RTGEEVFGLLESMRK 338
I C A +LD A ++++G + P I ++ L + RT + + +L M +
Sbjct: 97 IGCCCSAGRLDLGFAALGHVVKKGFRVEPII--FNPLLKGLCADKRTDDAMDIVLRGMTE 154
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKL 396
+ C P ++ +++K + ++ + ++++G G P+ SY+ +I L G
Sbjct: 155 LSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDP 214
Query: 397 EEAHQYYMEMKEKQLLP 413
++A+ Y EM ++++LP
Sbjct: 215 DKAYATYREMLDRRILP 231
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 6/223 (2%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL-M 266
V ++ +I C A L + + G + ++N ++ L + DA+ + +
Sbjct: 90 VHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVL 149
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS--PTIRTYHAFLDIIR 324
+ M E PNV ++ ++K LC + EA + M G P + +Y +D +
Sbjct: 150 RGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLL 209
Query: 325 TG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G ++ + M P Y +I + + +V + + +NG P+
Sbjct: 210 KGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCF 269
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+YT+L+H +G+L EA ++ +M + P T D+
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDY 312
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA L K + D A + D M P+ T +L + +C+ + AI
Sbjct: 236 YSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSL---VHGFCSSGQLTEAIKFLE 292
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + LC+ +A + + + P + +++ +L+G+ I
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKP-DITTYSSLLHGYA-I 350
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G+ E ++ M Q + D F+ +I +K + + + +F +M++ G++ +
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVT 410
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+ +I+ K +++A++L + M GV+PN +TYN +++ L + + A++ + +++
Sbjct: 411 YSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQII 470
Query: 306 QRG 308
+ G
Sbjct: 471 KSG 473
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N SFN ++ G N G E +W M + G D ++ ++ + K +K L +
Sbjct: 58 NVASFNTMMRGLFNN-GEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHV 116
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ K+ G D Y+A+I L K + A+S++ M E G PN YN+LI L
Sbjct: 117 LEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLG 176
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
A K ++A + F E+ R SPTI TY+ ++ + GE E + L++ M + G P+ T
Sbjct: 177 ASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVIT 236
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LIK + + ++WN++ G PD + LIH L GK E A + Y +M
Sbjct: 237 YSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMN 296
Query: 408 EKQLLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 297 HWNCAPNLVTYNTLMEGFY 315
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F ++ ++ I+++G+C G + ++ V Q G D ++S +IS K L K
Sbjct: 90 FVEDSTTYGILVHGFCKN-GYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKA 148
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ + + M G + + +VYNA+I+ L +DAI + K + + +P +VTYN+LI
Sbjct: 149 VSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLING 208
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTY------------------------------- 316
LCK + EA EML++G +P++ TY
Sbjct: 209 LCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPD 268
Query: 317 --------HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
H + +T E L M C P TY L++ F + N +W
Sbjct: 269 VQMHNILIHGLCSVGKT-EHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIW 327
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
I NG PD SY + L ++ A + + K ++P T
Sbjct: 328 ARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 112/281 (39%), Gaps = 7/281 (2%)
Query: 37 VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
V + +N + L KQ G A Y MI+ L K+ K D A ++++ M
Sbjct: 101 VHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGC 160
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
P+ Q LI AI F + I + L++ LC+ + +
Sbjct: 161 KPN---TQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAE 217
Query: 157 AEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
A L+ K P + ++++++ G C A ++W ++ +G DV + +
Sbjct: 218 AYDLVKEMLEKGWNP-SVITYSLLIKGLCQD-HKVEMALQLWNQVISKGFKPDVQMHNIL 275
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I L+ M + YN ++ KG ++A+ + + G+
Sbjct: 276 IHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGL 335
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
P++++YN +K LC ++ A ++ + + I PT+ T
Sbjct: 336 LPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
C++ ++ A + + EM + ISP Y+A L+ + G + F L E M + G +
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M+ F+ + VF +W + E+G D ++Y L+H NG
Sbjct: 61 SFNTMMRGLFNN-GEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNG 108
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 20/273 (7%)
Query: 166 DVFPFNTKSFNIILNGWCNIIGSS-REAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
D+F F + ++NG+C +G+ EA + +M + GI DVV ++ II K ++
Sbjct: 140 DIFTFTS-----LINGFC--LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L LF+QM+ GI D +Y ++++ L +DA L++ M ++ + P+V+T+N+L
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM----- 339
I K KL +A++ ++EM+Q I+P I TY + ++ G + G L+ R+M
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN----GLCMEGRLDEARQMFYLME 308
Query: 340 --GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC P Y LI F + ++ + K++ E+S+ G + +YT LI L GK
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Query: 398 EAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQ 429
A + + M + + P +T + LL YN +
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 19/352 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA-- 125
Y T+I L K D A +L ++M P +V +L + C + GR +A
Sbjct: 179 YTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL---VNGLC---NSGRWRDADL 232
Query: 126 -FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
+ K + F L+ A + + DA+ L + P N ++ ++NG
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAP-NIFTYTSLINGL 291
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C + G EA +++ M +G DVV+++ +I+ + K + + +++F +M + G+ +
Sbjct: 292 C-MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
Y +I A + M +GV PN+ TYN L+ LC K+++A F+
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410
Query: 303 EMLQR---GISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+M +R G+ P IRTY+ L + G E+ + M+K TY ++I+
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ + + ++ + G P+ +YT +I LF G + EAH + +MKE
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 48/351 (13%)
Query: 3 TLVDILREFSHKRSEMR--NKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQ 58
T++D L + H + + N++E GI+ + + +++ + N W A L +
Sbjct: 181 TIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA-DLLLRGMMK 239
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
++ +I K K A L +EM P++ T +L I C
Sbjct: 240 RKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL---INGLCMEGR 296
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
+ A FY + + + L++ C+ K V+DA + + ++ NT ++
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G+ ++G A+ V+ M RG+ ++ +++ ++ C ++K L +F+ M++
Sbjct: 357 LIQGF-GLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKR 415
Query: 238 ---GIECDRKVYNAVIHALA-KGRL----------------------------------V 259
G+ + + YN ++H L G+L V
Sbjct: 416 EIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKV 475
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
KDA++L S+ KGV PNVVTY ++I L + + EA F +M + G+S
Sbjct: 476 KDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+ +++ +AK + I+L K ++ GV+ ++ T N L+ C++ + A +++
Sbjct: 74 FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ G P I T+ + ++ G EE ++ M +MG +P Y +I +
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
N ++N++ G PD YT+L++ L +G+ +A M ++++ P+ T L
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253
Query: 423 D 423
D
Sbjct: 254 D 254
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 7/175 (4%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
R++ +H+L +A+ L M E P+++ + L+ + K +K D
Sbjct: 40 REILRNGLHSLQ----FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCK 95
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+ G+S + T + ++ + L + K+G +P T+ LI F
Sbjct: 96 HLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGN 155
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + N++ E G PD YT +I +L NG ++ A + +M+ + P+
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPD 210
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 162/359 (45%), Gaps = 11/359 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G++ S+ ++ + +L K D W E G + + I I+ +C +V
Sbjct: 68 GHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY----LGRTQFDVYSFGITIKAFCENGNV 123
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNI 177
+ + + + + L+ A CR ++ A+ +MF D N + I
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK-VMFSRMDDLGLAANQYIYTI 182
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+ G ++ ++ +M G+ ++ +++ +I+ Y + L ++FD++ +
Sbjct: 183 MINGFFKK-GYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ C+ YN +I L + V A L++ M+ + P T+N L+ LC +LD+A
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+++ G+ PT+ TY+ + + V L+ M G P+ TY +L+
Sbjct: 302 LSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNT 361
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F R +++++ + G PD+ +Y LIH L + G + EA + Y M E L P
Sbjct: 362 FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
F+ SF I + +C G+ + + +M G+ +V ++ +I + ++ +
Sbjct: 105 FDVYSFGITIKAFCEN-GNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKV 163
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +M +G+ ++ +Y +I+ K KD L + M+ GV PN+ TYNSLI C
Sbjct: 164 MFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYC 223
Query: 290 KARKLDEARQAFDEMLQRG-----------------------------------ISPTIR 314
+ KL A + FDE+ +RG I+PT R
Sbjct: 224 RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR 283
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
T++ +D + TG ++ LE ++ +G PT TY +LI FS+ V ++ E+
Sbjct: 284 TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREM 343
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ G P + +YT L++ + +E+A++ + MK L+P+ T +L
Sbjct: 344 EDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVL 393
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 45/324 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y MI K + L +M+ P+L T +L I YC +
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL---ITEYCRDGKL 228
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + A + L+ LCR V AE L+ + P T++FN+
Sbjct: 229 SLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP-TTRTFNM 287
Query: 178 ILNGWCNI----------------------------------IGSSREAERVWMEMSQRG 203
+++G CN +G+S + EM RG
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDA 262
I V+++ +++ + ++ ++ K +F MKR+G+ D+ Y +IH L KG +V +A
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV-EA 406
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
L KSM E + PN V YN++I CK +A + +EM++ G++P + +Y + + I
Sbjct: 407 SKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQI 466
Query: 323 I-RTGEEVFG--LLESMRKMGCQP 343
+ + G+ + LL+ M + G +P
Sbjct: 467 LCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKVYNAVIHALAKGRLVKDAISLMKS 268
SF+ + +K+ NL + F + +G + D + I A + V L+
Sbjct: 75 SFNNALDLLAKSGNLDRTWGFFTEY--LGRTQFDVYSFGITIKAFCENGNVSKGFELLAQ 132
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG- 326
ME GV+PNV Y LI+ C+ +D+A+ F M G++ Y ++ + G
Sbjct: 133 METMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGY 192
Query: 327 -EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
++ F L + M+ +G P TY LI ++ R + FKV++EIS+ G + +Y
Sbjct: 193 KKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNI 252
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
LI L G++ +A MK + P +T +L D N +++ ++ L+
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLE 306
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 184/400 (46%), Gaps = 8/400 (2%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
++S++ V ++ +++ A F + + G+ HS + ++ + + ++ A L
Sbjct: 82 EISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNL 141
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FKFAVGIEDFQGLLS 146
+ P + +T +LI YC + A + F A ++ +L
Sbjct: 142 LKNELATIFRPDV---ETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLH 198
Query: 147 ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
LC+ V A + P + +F+I++NG G +A + E + G
Sbjct: 199 GLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKA-GMMIQAHSLAQETTTNGCTI 257
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D+ +++ I++ +K + + + + L +++ G YNA+++ L K +++AI L+
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 317
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRT 325
+ + + G P+VVTY SLI L K ++ EA + F EM RG++ Y A + +++T
Sbjct: 318 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQT 377
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + + ++M GC P T +I S+ + G +++ + G P+ Y
Sbjct: 378 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 437
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ALIH L K++ A + +MK+ P+ T +L D
Sbjct: 438 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 162/381 (42%), Gaps = 47/381 (12%)
Query: 65 TREYHTMIAI---LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
T + HT AI L K +K A AL++++ P++ T LL C + +
Sbjct: 256 TIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL---NGLCKMGRLEE 312
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNI 177
AI+ + + L+ L + K +A L K++ +T +
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF---KEMASRGLALDTVCYTA 369
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G G +A V+ M+ G DVV+ S +I SKA + +R+F M+
Sbjct: 370 LIRGLLQT-GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ + VY+A+IH L K R + A+ ++ M++ P+ +TYN LI LCK+ ++ A
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKM--------------- 339
R FDEML+ G P + TY+ + + + G + G+L+ M
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSG 548
Query: 340 ----GCQ----------PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
GC + T LI + + ++N I + G P +Y +
Sbjct: 549 KLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNS 607
Query: 386 LIHALFLNGKLEEAHQYYMEM 406
+I AL +GK+ E Y EM
Sbjct: 608 IISALIKSGKVNEGQAVYQEM 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y+ ++ L K+ + + A L+ ++ P +VT +L +
Sbjct: 288 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL---------IDG 338
Query: 119 VGRAINAFYAYKRFK------FAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKD 166
+G+ +F AYK FK A+ + L+ L + + A + C D
Sbjct: 339 LGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPD 398
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
V +T +++G G A R++ M RG+ + V +S +I KAR +
Sbjct: 399 VVTLST-----MIDGLSKA-GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L + QMK+ D YN +I L K V+ A + M E G P+V TYN LI
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512
Query: 287 PLCKARKLDEARQAFDEM---------LQRGISPTIRTYHA---FLDIIRTG-------- 326
LCKA D A D+M L G+ + + F ++ R+G
Sbjct: 513 GLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRT 572
Query: 327 ------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+E L ++RK G P Y +I + + V+ E++
Sbjct: 573 RLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW 631
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
PDR +Y AL++ + +++ AH YY+EM + +P
Sbjct: 632 WK-PDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 11/262 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y +I L K RK D A ++ +M+ P +T ILI C DV
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN---ILIDGLCKSGDV 485
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A F + + L+S LC+ N A ++ D + ++ ++
Sbjct: 486 EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL----DDMSSSRFVYSSLV 541
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G C G ++ EM + G+ I KA + + + LF+ +++ G+
Sbjct: 542 DGLCKS-GKLEGGCMLFHEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGM 599
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
YN++I AL K V + ++ + M + P+ VTYN+L+ + A ++D A
Sbjct: 600 P-HPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHY 657
Query: 300 AFDEMLQRGISPTIRTYHAFLD 321
+ EM RG P + H D
Sbjct: 658 YYLEMTGRGYVPPVSILHKLAD 679
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 176/376 (46%), Gaps = 9/376 (2%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
D EAA + F K G Y+++I GKV A ++ +EM+ P ++T
Sbjct: 265 GDLEAARSLF-EEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVIT 323
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
+L I +C + +A + K+ + + L+ A C+ + +A
Sbjct: 324 YNSL---INCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFV 380
Query: 163 CNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
V N ++ +++ C I G EA ++ EM Q G+ ++V+++ ++ +
Sbjct: 381 DMIRVGLQPNEFTYTSLIDANCKI-GDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCED 439
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + LF + + G ++++Y ++ H K ++++ A+ +++ M +K + P+++ Y
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLY 499
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRK 338
+ I LC+ +++++ EM+ G++ Y +D + G+ E LL+ M+
Sbjct: 500 GTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQD 559
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+G + T TY +LI + + ++ ++ NG P+ YTALI L N LEE
Sbjct: 560 LGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEE 619
Query: 399 AHQYYMEMKEKQLLPE 414
A + EM +K + P+
Sbjct: 620 AKNLFNEMLDKGISPD 635
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 172/377 (45%), Gaps = 31/377 (8%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
VS+ L ++ D ++A FF AG ++G+ H+ Y + IL + A ++I E
Sbjct: 97 VSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEW-- 154
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
IL+ R D + + R F V F L + L
Sbjct: 155 --------------ILLGREFPGCDFFDMLWSTRNVCRPGFGV----FDTLFNVLVDLGM 196
Query: 154 VQDAEHLMF-CNK-DVFPFNTKSFNIILNGWCNIIGSSRE--AERVWMEMSQRGICYDVV 209
+++A + NK V P +S N +L+ + SS+ A + +M G+ V
Sbjct: 197 LEEARQCFWKMNKFRVLP-KVRSCNELLH---RLSKSSKGGLALSFFKDMVVAGLSPSVF 252
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+++ +I C ++ +L LF++MK G+ D YN++I K ++ A+S+ + M
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE- 327
++ G P+V+TYNSLI CK ++ +A + M QRG+ P + TY +D + G
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E M ++G QP TY LI + FK+ +E+ + G + +YTAL
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTAL 432
Query: 387 IHALFLNGKLEEAHQYY 403
+ L +G++ EA + +
Sbjct: 433 LDGLCEDGRMREAEELF 449
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 164/405 (40%), Gaps = 53/405 (13%)
Query: 52 FLWAGKQSGYAHSTREYHTMI------AILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+L KQ G + Y T+I +L + KF +D +R G P+ T +
Sbjct: 343 YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF-----FVDMIRVG-LQPNEFTYTS 396
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN- 164
L I C + D+ A ++ + I + LL LC +++AE L
Sbjct: 397 L---IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 165 KDVFPFNTKSFNIILNGW-----------------------------CNIIGSSREAE-- 193
K + N + + + +G+ I G R+ E
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513
Query: 194 ---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
V EM G+ + ++ +I Y K + + L +M+ +GI+ Y +I
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K LV+ A+ M G+ PN++ Y +LI LCK L+EA+ F+EML +GIS
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633
Query: 311 PTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P Y + +D ++ G E L M ++G + Y LI FSR+ Q +
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+E+ G PD+ L+ + G + EA + +M + L+
Sbjct: 694 LDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FN++++ +G EA + + +M++ + V S + ++ SK+ L F M
Sbjct: 188 FNVLVD-----LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDM 242
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+ YN VI LA+ ++ A SL + M+ KG+ P++VTYNSLI K L
Sbjct: 243 VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGML 302
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIML 351
A F+EM G P + TY++ ++ E + F L M++ G QP TY L
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTL 362
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
I F + K + ++ G P+ +YT+LI A G L EA + EM++
Sbjct: 363 IDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++ + + L ++++A M + V P V + N L+ L K+ K A F +M
Sbjct: 183 VFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDM 242
Query: 305 LQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G+SP++ TY+ + + R G E L E M+ G +P TY LI + +
Sbjct: 243 VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGML 302
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V+ E+ + G PD +Y +LI+ ++ +A +Y MK++ L P T L
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTL 362
Query: 422 QD 423
D
Sbjct: 363 ID 364
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 172/370 (46%), Gaps = 8/370 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G S Y+ ++ L ++A + + M GG+ P VT I+I+ YC
Sbjct: 212 KENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN---IMIKGYCKA 268
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSF 175
+ +A+ F + + L+ A ++ L + S+
Sbjct: 269 GKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSY 328
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++++ G C EA V+ M+Q+G +V ++ +I YSK ++ + +RLF++MK
Sbjct: 329 SLVIGGLCKQ-RKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G E D Y+ +++ L K + D + L KGVA N + Y SLI L KA +++
Sbjct: 388 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 447
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A F+EM ++G + Y+A +D + + G ++ L M + GC T T+ +LI
Sbjct: 448 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 507
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + K W+++ + G P +S+ AL L L GK+ A + ++ ++
Sbjct: 508 DGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGII 567
Query: 413 PEPKTDELLQ 422
PE ++++
Sbjct: 568 PETAFEDMIN 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 185/394 (46%), Gaps = 20/394 (5%)
Query: 27 IKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
+K+S V+ VL V R E A FF WAGKQ Y H + ++I +L
Sbjct: 110 VKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 169
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK---FAVGIEDF 141
+ E++ + G L+T+ LI+ + ++G + ++R K + +
Sbjct: 170 RLVFFELK--DRG-LLMTESAANSLIKSF---GNLGLVEELLWVWRRMKENGIDPSLYTY 223
Query: 142 QGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ L ++ AE + + + P +T ++NI++ G+C G ++A + +M
Sbjct: 224 NFLVNGLVNSMFIESAEKVFEVMDGGKIVP-DTVTYNIMIKGYCK-AGKLQKAMEKFRDM 281
Query: 200 SQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ + D +++ +I +CYS+ R+ L L+ +M+ G+E Y+ VI L K R
Sbjct: 282 EMKNVKPDKITYMTLIQACYSE-RDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 340
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+A ++ ++M +KG NV Y +LI K ++EA + F+ M G P TY
Sbjct: 341 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 400
Query: 319 FLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ + ++G ++ L + R G Y LI + + + ++ E+SE G
Sbjct: 401 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 460
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
D Y A+I AL +GK+++A + M+E+
Sbjct: 461 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEE 494
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ E+ RG+ + + +I + + ++L ++ +MK GI+ YN +++ L
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
++ A + + M+ + P+ VTYN +IK CKA KL +A + F +M + + P
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291
Query: 315 TYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY + R + L M + G + +Y ++I + R+ + V+ +
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 351
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ G + + YTALI + NG +EEA + + MK + P+ T +L
Sbjct: 352 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVL 401
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 50/317 (15%)
Query: 40 WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETG 97
+ D++ + +L ++ G Y +I L K RK A+A+ + M +G
Sbjct: 301 YSERDFDTCLSLYLEM-EERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRAN 359
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
++ T LI Y + A+ F K F + L++ LC+ + D
Sbjct: 360 VAIYTA-----LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDG 414
Query: 158 EHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
L FC N + +++G G +AE ++ EMS++G D ++ II
Sbjct: 415 MELFDFCRNKGVAINAMFYASLIDGLGKA-GRIEDAENLFEEMSEKGCARDSYCYNAIID 473
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYN--AVIHALAKGRLVKDAISLMKSMEEKGV 274
+K + + L LF +M+ G CD+ VY +I L K ++AI M +KG+
Sbjct: 474 ALAKHGKIDQALALFGRMEEEG--CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGI 531
Query: 275 APNVVTYNSL----------------------------------IKPLCKARKLDEARQA 300
P V ++ +L I LCKA+++ EA +
Sbjct: 532 TPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKL 591
Query: 301 FDEMLQRG--ISPTIRT 315
D ++ RG I IRT
Sbjct: 592 ADGIVDRGREIPGRIRT 608
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 175/386 (45%), Gaps = 53/386 (13%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y+T+I L + D A A++D+M P +VT IL+ C +A+
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYT---ILLEATCKRSGYKQAVK 208
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILN 180
+ A I + +++ +C+ V DA + K + + NT S+NI+L
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFL---KSLPSYGCEPNTVSYNIVLK 265
Query: 181 GWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G C + R +AE++ EMS++G +VV+F+ +IS + + + + DQ+ + G
Sbjct: 266 GLCT---AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ YN ++HA K + + A++ ++ M G P++V+YN+L+ LC+ ++D A
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 299 QAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIML---- 351
+ ++ +G +P + +Y+ +D + + G EE LL M G QP TY +
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 352 ---------IKKFSRWRQFG----------------------NVFKVWNEISENGNGPDR 380
IK F + + G + ++ + NG P+
Sbjct: 443 CREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNE 502
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEM 406
S+YT LI L G ++EA + E+
Sbjct: 503 STYTILIEGLAYEGLVKEAREMMAEL 528
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 166/367 (45%), Gaps = 19/367 (5%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+ A + H + + + +L + + A L++ M G E PS LI+
Sbjct: 43 YAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLE--PS--AAGPCAALIK 98
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF- 170
+ CA A + + + + +++ C + +A L+ P
Sbjct: 99 KLCASGRTAEARRVLASCEP-----DVMSYNAMVAGYCVTGQLDNARRLVA----AMPME 149
Query: 171 -NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+T ++N ++ G C G + A V +M +RG DVV+++ ++ K + ++
Sbjct: 150 PDTYTYNTLIRGLCGR-GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L D+M+ G D YN V++ + + V DA+ +KS+ G PN V+YN ++K LC
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLC 268
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
A + ++A + EM ++G P + T++ + + R G E +L+ + K GC P +
Sbjct: 269 TAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL 328
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+Y ++ F + ++ + +G PD SY L+ AL G+++ A + ++
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388
Query: 407 KEKQLLP 413
K+K P
Sbjct: 389 KDKGCTP 395
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 16/271 (5%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WE A ++ G + ++ +I+ L + + A ++D++ P+ ++
Sbjct: 273 WEDAEKLMAEMSRK-GRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG----IEDFQGLLSALCRYKNVQDAEHL 160
+L +C + RA+ A+ + G I + LL+ALCR V A L
Sbjct: 332 PIL---HAFCKQKKMDRAM----AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384
Query: 161 MFCNKD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ KD P S+N +++G G + EA + EM +G+ D++++S I S
Sbjct: 385 LHQLKDKGCTPV-LISYNTVIDGLTKA-GKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + + ++ F +++ MGI + +YNA++ L K R AI L M G PN
Sbjct: 443 CREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNE 502
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
TY LI+ L + EAR+ E+ RG+
Sbjct: 503 STYTILIEGLAYEGLVKEAREMMAELCSRGV 533
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 233 QMKRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ +R+ C+ V YNA++ + +A L+ +M + P+ TYN+LI+ LC
Sbjct: 108 EARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCG 164
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDT 347
+ D A D+ML+RG P + TY L+ R+G ++ LL+ MR GC P T
Sbjct: 165 RGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVT 224
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +++ + + + + + G P+ SY ++ L + E+A + EM
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVE 432
K P T +L + + VE
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVE 309
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 125/290 (43%), Gaps = 11/290 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G +T Y+ ++ L +++ A L+ EM P++VT +LI
Sbjct: 244 FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN---MLIS 300
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFP 169
C V A+ ++ + +L A C+ K + A + + +P
Sbjct: 301 FLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP 360
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ S+N +L C G A + ++ +G ++S++ +I +KA + L
Sbjct: 361 -DIVSYNTLLTALCRG-GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALE 418
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L ++M G++ D Y+ + L + +++AI +++ G+ PN V YN+++ LC
Sbjct: 419 LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
K R A F M+ G P TY ++ G GL++ R+M
Sbjct: 479 KRRATHSAIDLFTYMVSNGCMPNESTYTILIE----GLAYEGLVKEAREM 524
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 21/370 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ SG Y+ +I+ K + +A L+D M P +VT T+L R C
Sbjct: 172 EDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTIL---RTLCDS 225
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPF 170
+ A+ + + + + L+ A C+ V A L+ C DV
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV-- 283
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++N+++NG C G EA R M G +V++ + I+ +
Sbjct: 284 ---TYNVLINGICKE-GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKF 339
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M R G +N +I+ L + L+ AI +++ M + G PN ++YN L+ LCK
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDT 347
+K++ A + D M+ RG P I TY+ L + +V +E + ++G C P T
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +I S+ + + K+ +E+ G PD +Y+ L+ L GK++EA ++ +++
Sbjct: 460 YNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Query: 408 EKQLLPEPKT 417
E + P T
Sbjct: 520 EMGVKPNAIT 529
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 160/331 (48%), Gaps = 16/331 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K A ++D E P ++T ILI C VG+A+
Sbjct: 215 YNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYT---ILIEATCKESGVGQAMKLLD 271
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILNGW 182
+ + + L++ +C+ + +A + F N P N + NIIL
Sbjct: 272 EMRDKGCKPDVVTYNVLINGICKEGRLDEA--IRFLNH--MPSYGCQPNVITHNIILRSM 327
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +AE+ EM ++G VV+F+ +I+ + + + + + ++M + G +
Sbjct: 328 CST-GRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN ++HAL K + ++ AI + M +G P++VTYN+L+ LCK K+D A + +
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G SP + TY+ +D + + G ++ LL+ M+ G +P TY L+ SR
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ ++++ E G P+ +Y +++ L
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 137/284 (48%), Gaps = 20/284 (7%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWCNI--IGSSREAERVWMEM 199
L+ LC+ A +M +D P + ++N++++G+C IGS+ + +
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVP-DVITYNVLISGYCKTGEIGSALQL------L 203
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFD-QMKRMGIEC--DRKVYNAVIHALAKG 256
+ + DVV+++ I+ + L + + + D QM+R EC D Y +I A K
Sbjct: 204 DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR---ECYPDVITYTILIEATCKE 260
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
V A+ L+ M +KG P+VVTYN LI +CK +LDEA + + M G P + T+
Sbjct: 261 SGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITH 320
Query: 317 HAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ L + TG + L M + GC P+ T+ +LI R G V ++ +
Sbjct: 321 NIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ 380
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+G P+ SY L+HAL + K+E A +Y M + P+ T
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E + +M RG D+++ + +I K K R+ + ++ G D Y
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I K + A+ L+ M V+P+VVTYN++++ LC + KL EA + D +Q
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 307 RGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R P + TY ++ +G + LL+ MR GC+P TY +LI + +
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ N + G P+ ++ ++ ++ G+ +A ++ EM K P T +L +
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360
Query: 424 WSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ K + R I L+ PQ G +S
Sbjct: 361 FLCRKGLIGRAIDVLE-KMPQHGCTPNSLS 389
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 16/327 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y+ +I + K + D A ++ M P+++T I++R C+
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHN---IILRSMCST 330
Query: 117 HDVGRAINA--FYA-YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
GR ++A F A R + + F L++ LCR + A ++ P N
Sbjct: 331 ---GRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTP-N 386
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+ S+N +L+ C R E + + M RG D+V+++ +++ K + + +
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDI-MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+Q+ G YN VI L+K DAI L+ M+ KG+ P+++TY++L+ L +
Sbjct: 446 NQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSRE 505
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGEEV--FGLLESMRKMGCQPTNDTY 348
K+DEA F ++ + G+ P TY++ L + + + V L M GC+PT +Y
Sbjct: 506 GKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSY 565
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENG 375
++LI+ + ++ NE+ G
Sbjct: 566 MILIEGLAYEGLAKEALELLNELCSRG 592
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 181/377 (48%), Gaps = 16/377 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L K+ + TA ++ ++ G ++V T++ + ++ V
Sbjct: 168 GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV--- 224
Query: 120 GRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
I+A+ Y + K + + F L+ C +++A L K++ P + +
Sbjct: 225 ---IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP-DYYT 280
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
FNI+++ C G+ + A+ + + M + G+ +VV++S ++ Y ++K + + +
Sbjct: 281 FNILVDALCKE-GNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTI 339
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+MG + Y +I+ K ++V +A+SL M+ KG+AP+ VTYNSLI LCK+ ++
Sbjct: 340 SQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRI 399
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIML 351
A + DEM G I TY+ +D + V L++ ++ G QP T+ +L
Sbjct: 400 SYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNIL 459
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + N V+ ++ G + +Y +++ L G +EA +M + +
Sbjct: 460 IYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGI 519
Query: 412 LPEPKTDELLQDWSYNK 428
+P+ T E L ++K
Sbjct: 520 IPDAVTYETLIQALFHK 536
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 166/353 (47%), Gaps = 16/353 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + A+ L +M + P +VT L I +C V + A F
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSAL---IYGFCIVGQLEEAFGLFR 267
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNI 185
F L+ ALC+ N++ A++++ + V P N +++ +++G+C +
Sbjct: 268 EMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP-NVVTYSSLMDGYC-L 325
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ +A+ V +SQ G + S+ +I+ + K + + + L LF+ M+ GI D+
Sbjct: 326 VNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN++I L K + A L+ M + G N+ TYN LI LCK +D+A ++
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445
Query: 306 QRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+GI P + T++ + ++ ++VF + + G TY +++ +
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVF---QDLLSKGYSVNAWTYNIMVNGLCKEG 502
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
F + +++ +NG PD +Y LI ALF + E+A + EM + ++
Sbjct: 503 LFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 19/386 (4%)
Query: 74 ILGKVRK-----FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
ILG + K + TA +L + P + T ILI YC + ++ A +
Sbjct: 72 ILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFN---ILINCYCHMAEMNFAFSMMAK 128
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCN 184
+ + F L+ LC V++A H + V F + S+ ++NG C
Sbjct: 129 ILKMGYEPDTITFNTLIKGLCLNGKVKEALHF---HDHVLALGFHLDQFSYGTLINGLCK 185
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I G +R A ++ ++ + + +VV ++ II K + + L+ QM I D
Sbjct: 186 I-GETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
++A+I+ +++A L + M K + P+ T+N L+ LCK L A+ M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304
Query: 305 LQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ G+ P + TY + +D ++ + +L ++ +MG P +Y +I F + +
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++N++ G PD+ +Y +LI L +G++ A + EM + T L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424
Query: 422 QDWSYNKQFVERQIASLKAHQPQSGQ 447
D V++ IA +K + Q Q
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQ 450
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 80/326 (24%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQR----GICYDVVSFSCIISCYSKARNLHKVLRL 230
FN IL +++ S+ + +S+R GI D+ +F+ +I+CY ++ +
Sbjct: 69 FNKILG---SLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ +MG E D +N +I L VK+A+ + G + +Y +LI LCK
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCK 185
Query: 291 A----------RKLD-------------------------EARQAFDEMLQRGISPTIRT 315
RK+D +A + + +M+ + ISP + T
Sbjct: 186 IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245
Query: 316 YHAFL---DIIRTGEEVFGL-----------------------------------LESMR 337
+ A + I+ EE FGL L M
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K G P TY L+ + Q V N IS+ G P+ SY +I+ ++
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVD 365
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
EA + +M+ K + P+ T L D
Sbjct: 366 EALSLFNDMQFKGIAPDKVTYNSLID 391
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 32/361 (8%)
Query: 7 ILREF--SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHS 64
ILR F H E + G ++ + ++VL + N + A FF W +Q G+ H
Sbjct: 293 ILRRFKWGHAAEE---ALHNFGFRMDAYQANQVLKQMDN-YANALGFFYWLKRQPGFKHD 348
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
Y TM+ LG+ ++F L+DEM P+ VT L I Y + + A+N
Sbjct: 349 GHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRL---IHSYGRANYLNEAMN 405
Query: 125 AFYAYKR---------FKFAVGIEDFQGLLS-ALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
F + + + I G L A+ Y+ +Q A + D F +
Sbjct: 406 VFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAG----LSPDTF-----T 456
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+++I+N G A R++ EM +G ++V+F+ +I+ ++KARN L+L+ M
Sbjct: 457 YSVIIN-CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 515
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G + D+ Y+ V+ L +++A + M+ K P+ Y L+ KA +
Sbjct: 516 QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV 575
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIML 351
++A Q + EML G+ P + T ++ L + E + LL+SM +G P+ TY +L
Sbjct: 576 EKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 635
Query: 352 I 352
+
Sbjct: 636 L 636
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q G +D +++ ++ +A+ + RL D+M + G + + YN +IH+ + +
Sbjct: 342 QPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLN 401
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A+++ K M+E G P+ VTY +LI KA LD A + M G+SP TY +
Sbjct: 402 EAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVII 461
Query: 321 DIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + + L M GC P T+ ++I ++ R + K++ ++ G
Sbjct: 462 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 521
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PD+ +Y+ ++ L G LEEA + EM+ K +P+ LL D
Sbjct: 522 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R+ EM + G + V+++ +I Y +A L++ + +F QM+ G E DR Y +I
Sbjct: 370 RLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIH 429
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
AK + A+ + + M+ G++P+ TY+ +I L KA L A + F EM+ +G +P +
Sbjct: 430 AKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 489
Query: 314 RTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
T++ + + R E L M+ G QP TY ++++ V+ E
Sbjct: 490 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 549
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE-PKTDELLQDW 424
+ PD Y L+ G +E+A Q+Y EM L P P + LL +
Sbjct: 550 MQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTF 604
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 183/428 (42%), Gaps = 55/428 (12%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET--GP 98
++ D +F FF W Q+ + Y ++ IL K KF +A +++ + G + P
Sbjct: 167 IKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHP 226
Query: 99 SLVTKQTLLI-------------LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
S + + L L + Y + + AI+ F K + F +E +
Sbjct: 227 SKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYI 286
Query: 146 SA----------------LCRYK---NVQDAEHLM--FCN-----KDV----------FP 169
SA + RY+ NV +M FC K + F
Sbjct: 287 SASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFS 346
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
S+N ++ G+CN G ++ + M + G+ D V+F+ +I+ + + LH+ +
Sbjct: 347 PTITSYNTLIAGYCNK-GLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANK 405
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F +MK + + YN +I+ ++ + L M G+ +++TYN+LI LC
Sbjct: 406 IFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 465
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTND 346
+ +A E+ + + P T+ A + + + E F L +SM + GC P
Sbjct: 466 MEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYH 525
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
T+ MLI F + F +V E+SE PD + + L L+L+GK E A + EM
Sbjct: 526 TFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 585
Query: 407 KEKQLLPE 414
+ K L+PE
Sbjct: 586 EMKHLMPE 593
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 241 CDRK--VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
CD V++++ A+ + +++AI + M++ G P V + N+ I ++ D A
Sbjct: 240 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 299
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ EM + ISP + T + + + G E+ + + M MG PT +Y LI +
Sbjct: 300 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGY 359
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ K+ + +NG PD ++ LI+ GKL EA++ + EMK ++P
Sbjct: 360 CNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 419
Query: 416 KT-DELLQDWS 425
T + L+ +S
Sbjct: 420 ITYNTLINGYS 430
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 26/370 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y +I L K + A+ L +EM+ PS+ T ILI +C +
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT---ILIDSFCKAGLI 504
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+A N F R + + L+ A + + V DA L M + P N ++
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKP-NVVTYTA 563
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSKA 221
+++G C G +A +++ M D+ +++ ++ KA
Sbjct: 564 LIDGHCKA-GQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKA 622
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + L D M G E ++ VY+A+I K +++A + M E+G PN+ TY
Sbjct: 623 NRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTY 682
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK 338
+SLI L K ++LD + +ML+ +P + Y +D + + G EE + L+ M +
Sbjct: 683 SSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEE 742
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
+GC P TY +I F + + +++ ++ G P+ +Y LI+ G L+E
Sbjct: 743 VGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDE 802
Query: 399 AHQYYMEMKE 408
AH+ EMK+
Sbjct: 803 AHRLLDEMKQ 812
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 185/446 (41%), Gaps = 94/446 (21%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------- 107
+ T Y+ M++ L + F A ++D MR P++VT + LL
Sbjct: 268 FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCK 327
Query: 108 ----ILIRRYC---------AVHDVGRAINAFYAYKRFKFAV------GIEDFQGLLSAL 148
+++ C VH ++ + YAYK FK + G + + ++
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSI 387
Query: 149 CRYKNVQDAEHLMFCNK---------------DVFPFN---------TKSFNIIL----- 179
C + + ++ L K +V F K+F II
Sbjct: 388 CSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSK 447
Query: 180 ------NGWCNIIGSSREAERV------WMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+ + +IG +A +V + EM + GI V +++ +I + KA + +
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
FD+M R + Y ++IHA K R V DA L + M +G PNVVTY +LI
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDG 567
Query: 288 LCKARKLDEARQAFDEMLQRGI-----------------SPTIRTYHAFLDIIRTG---E 327
CKA ++D+A Q + M Q I +P I TY A +D + E
Sbjct: 568 HCKAGQIDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVE 626
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E LL++M GC+P Y LI F + + N +V+ ++SE G P+ +Y++LI
Sbjct: 627 EAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLI 686
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
++LF +L+ + +M E P
Sbjct: 687 NSLFKEKRLDLVLKVLSKMLENSCTP 712
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 34/356 (9%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I K RK A L + M + P++VT L I +C + +A +
Sbjct: 526 YTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTAL---IDGHCKAGQIDKACQIYA 582
Query: 128 AYK----------RFKF------AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
+ FK I + L+ LC+ V++A L+ D N
Sbjct: 583 RMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELL----DTMSVN 638
Query: 172 TKS-----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
++ +++G+C G A+ V+++MS+RG C ++ ++S +I+ K + L
Sbjct: 639 GCEPNQIVYDALIDGFCKT-GKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDL 697
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
VL++ +M + +Y +I L K ++A LM MEE G PNV+TY ++I
Sbjct: 698 VLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMID 757
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQP 343
K K+++ + + +M +G +P TY ++ TG +E LL+ M++
Sbjct: 758 GFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPR 817
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
+Y +I+ F+ R+F + +E+SEN + P S Y LI G+LE A
Sbjct: 818 HISSYRKIIEGFN--REFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGA 871
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 193/473 (40%), Gaps = 90/473 (19%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
+E +N + + ++S LV EV++ V++ E FFLWA +Q GY+H+ Y+ +I +L
Sbjct: 85 AETQNFLRQFRGRLSEPLVVEVMNLVKHP-EFCVEFFLWASRQIGYSHTPVVYNALIELL 143
Query: 76 --GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGRAINAF 126
V + + ++R + + ++ L LI++ C A+ ++GR +
Sbjct: 144 CCNAVNNDRVSHKFLMQIRDDDRE---LLRKLLNFLIQKCCRNGMWNVALEELGRLKDFG 200
Query: 127 YAYKRFKFAVGIEDF---------------------------QGLLS-ALCRYKNVQDAE 158
Y + I+ F G + +LC+ DA
Sbjct: 201 YKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDAL 260
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS-C 217
L+ K+ F +T +N +++G C +EA + M +VV++ ++S C
Sbjct: 261 SLL--EKEEFVPDTVFYNRMVSGLCE-ASLFQEAMDILDRMRSISCIPNVVTYRILLSGC 317
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
K + L + R+ M G +R+++N+++HA K R A L K M + G P
Sbjct: 318 LGKGQ-LGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPG 376
Query: 278 VVTYNSLI-----------------------------------------KPLCKARKLDE 296
+ YN I + LC A K D+
Sbjct: 377 YLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDK 436
Query: 297 ARQAFDEMLQRGISPTIRTYH---AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + EM+ +G P TY FL E+ F L E M+K G P+ TY +LI
Sbjct: 437 AFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILID 496
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
F + ++E+ + P+ +YT+LIHA K+ +A++ + M
Sbjct: 497 SFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMM 549
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 122/295 (41%), Gaps = 20/295 (6%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY + Y ++I L K ++ D ++ +M P++V + I C V
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM---IDGLCKVG 728
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
A + + + ++ + ++ L C+K P N ++
Sbjct: 729 KTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAP-NFITY 787
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++N C+ G EA R+ EM Q + S+ II ++ R + L D++
Sbjct: 788 RVLINHCCST-GLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFN--REFITSIGLLDELS 844
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT-----YNSLIKPLCK 290
+Y +I K ++ A++L+ EE +P++ Y SLI+ L
Sbjct: 845 ENESVPVESLYRILIDNFIKAGRLEGALNLL---EEISSSPSLAVANKYLYTSLIESLSH 901
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTY-HAFLDIIRTG--EEVFGLLESMRKMGCQ 342
A K+D+A + + M+ + + P + T+ H + R G +E L +S+ +M C
Sbjct: 902 ASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCH 956
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 20/337 (5%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A FF WA +Q GY H Y TMI I+G+ R F+ L+ EMR P +VT
Sbjct: 50 ALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNR-- 107
Query: 108 ILIRRYCAVHDVGRAINAFYAYK-------RFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
LI Y + +G A+ FY + R + ++ L S + N D
Sbjct: 108 -LIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVD----LHSKAGFHDNAMDMYQK 162
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M + F +T ++++I++ G EA +++ EM +RG +V+++ II +K
Sbjct: 163 M--QQAGFQPDTFTYSVIIH-CLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAK 219
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ N ++L++ M+ G DR Y+ ++ L + +++A + ME+ G P+
Sbjct: 220 SGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPI 279
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMR 337
Y ++ KAR + A + + +ML G++P ++ ++ L ++ + FG++E+M+
Sbjct: 280 YGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMK 339
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
G PT T+ +L+ + Q V + + SE
Sbjct: 340 AWGLVPTLQTHTILLSSCTASAQHHQVVNLMHRSSET 376
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
Q G +DV +++ +I +ARN RL +M+R G E YN +IHA + +
Sbjct: 60 QEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLG 119
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A+ + M+E+G +P+ VTY +L+ KA D A + +M Q G P TY +
Sbjct: 120 EAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVII 179
Query: 321 DII-RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + G+ E L E M + G P+ TY ++I ++ + K++N++ + G
Sbjct: 180 HCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFH 239
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
PDR +Y+ ++ L G L+EA + EM++ +P+ ++ D
Sbjct: 240 PDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVD 285
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 7/253 (2%)
Query: 185 IIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
I+G +R E R+ EM + G VV+++ +I Y +A L + +R+F QM+ G
Sbjct: 76 IMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSP 135
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DR Y ++ +K +A+ + + M++ G P+ TY+ +I L KA K+ EA + F
Sbjct: 136 DRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLF 195
Query: 302 DEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM++RG +P++ TY+ +D+ ++G V L M+ G P TY ++++ +
Sbjct: 196 EEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQI 255
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK-T 417
++NE+ + G PD Y ++ E A ++Y +M + L P + +
Sbjct: 256 GHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQIS 315
Query: 418 DELLQDWSYNKQF 430
+ LL + +QF
Sbjct: 316 NSLLGSYLRMQQF 328
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 40/367 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A + Y +I L K RK D A ++ +M+ P +T +LI C DV
Sbjct: 156 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN---VLIDGLCKSGDV 212
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A AF F +L A C+ DV+ ++NI++
Sbjct: 213 -EAARAF--------------FDEMLEAGCK--------------PDVY-----TYNILI 238
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C + + + E + G D+ +++ I+ +K + + + + L +++ G
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
YNA+++ L K +++AI L++ + + G P+VVTY SLI L K ++ EA +
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
F EM RG++ Y A + ++++TG+ + + ++M GC P T +I S
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 418
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + G +++ + G P+ Y+ALIH L K++ A + +MK+ P+
Sbjct: 419 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 417 TDELLQD 423
T +L D
Sbjct: 479 TYNILID 485
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 145/348 (41%), Gaps = 74/348 (21%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNT---------KSF------- 175
I + LL+ LC+ +++A L+ C DV + + +SF
Sbjct: 21 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 80
Query: 176 -----NIILNGWCNI--------IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ L+ C G +A V+ M+ G DVV+ S +I SKA
Sbjct: 81 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 140
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ +R+F M+ G+ + VY+A+IH L K R + A+ ++ M++ P+ +TYN
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY-------------------------- 316
LI LCK+ ++ AR FDEML+ G P + TY
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTI 260
Query: 317 -------HAFLDII------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
H + I+ + EE L+E + GC PT TY L+ + +
Sbjct: 261 NGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 320
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ +I +NG PD +YT+LI L + EA++ + EM + L
Sbjct: 321 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 368
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 27/344 (7%)
Query: 52 FLWAGKQSGYAHS----------TREYHTMIAI---LGKVRKFDTAWALIDEMRGGETGP 98
F AG +HS T + HT AI L K +K + A AL++++ P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
++ T LL C + + AI+ + + L+ L + K +A
Sbjct: 301 TIATYNALL---NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357
Query: 159 HLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
L K++ +T + ++ G +A V+ M+ G DVV+ S +
Sbjct: 358 KLF---KEMALRGLALDTVCYTALIRELLQT-GKIPQASSVYKTMTSHGCVPDVVTLSTM 413
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I SKA + +R+F M+ G+ + VY+A+IH L K R + A+ ++ M++
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 473
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFG 331
P+ +TYN LI LCK+ ++ AR FDEML+ G P + TY+ + + G + G
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 533
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + M C TY LI + RQ + + E G
Sbjct: 534 VFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + + L +++ G YNA+++ L K +++AI L++ + + G P+VVTY S
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMG 340
LI L K ++ EA + F EM RG++ Y A + ++++TG+ + + ++M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
C P T +I S+ + G +++ + G P+ Y+ALIH L K++ A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ +MK+ P+ T +L D
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLID 204
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
K++EA +++ G +PTI TY+A L+ + + G EE LL + GC P TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI + ++ +K++ E++ G D YTALI L GK+ +A Y M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 410 QLLPEPKTDELLQD 423
+P+ T + D
Sbjct: 121 GCVPDVVTLSTMID 134
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 192/435 (44%), Gaps = 48/435 (11%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
GI + + + S ++S + + EA +TF+L +G A TR ++ ++ ++ + +A
Sbjct: 149 GISLPAPVCSGLMSRLPSTPEA-YTFYLQL-LDAGMAPETRLFNVLMRDFVRLGELVSAR 206
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
+ DEMR P++VT F L+
Sbjct: 207 KVFDEMRR-SVQPTVVT--------------------------------------FNTLI 227
Query: 146 SALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
S +CR +++ + L DV + ++ ++ G+C G A +++ EM G+
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRT-GRMENAVKMFNEMRDTGV 286
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
+ V F+ +I + K N++ + L+ M+ G+ D YNA+++ L + R +K A S
Sbjct: 287 NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAES 346
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+++ M+ G+ P+ VTY +LI CK KLD A +M ++ +S TY A + +
Sbjct: 347 IVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLS 406
Query: 324 RTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G V +L M + +P N TY M+I F R FK+ E+ G P
Sbjct: 407 KAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVV 466
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS--YNKQFVERQIASLK 439
+Y +++ L G+++ A M + P+ T +L D + K ++ S K
Sbjct: 467 TYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSK 526
Query: 440 AHQPQSGQNTRVISK 454
P T +IS+
Sbjct: 527 GMVPDFAVYTSLISE 541
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 19/312 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G Y +I + + + A + +EMR P+ V TL I +C +V
Sbjct: 250 GVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL---IDAHCKEGNV 306
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
++ + + + + L++ LCR +N++ AE ++ N + P + ++
Sbjct: 307 NAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKP-DKVTYTT 365
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C G A + +M+++ + D V+++ +IS SKA R+ +M
Sbjct: 366 LIDGCCKD-GKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+E D Y VI A + VK L+K M+ KG P VVTYN ++ LCK ++ A
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
ML G+SP TY+ LD + EE LES + G P Y L
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE----LESSK--GMVPDFAVYTSL 538
Query: 352 IKKFSRWRQFGN 363
I + ++ + N
Sbjct: 539 ISELAKKKPAKN 550
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI V + ++ L +A + + + G+AP +N L++ + +L
Sbjct: 147 RRGISLPAPVCSGLMSRLPS---TPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELV 203
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
AR+ FDEM +R + PT+ T++ + + R + V GL + M +G +P TY LI
Sbjct: 204 SARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K F R + N K++NE+ + G P+ +T LI A G + Y +M+ + ++
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322
Query: 413 PE 414
P+
Sbjct: 323 PD 324
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 12/359 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY T + T+I L K A ALID M P LVT + + C
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV---VNGLCKRG 232
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D A+N + K + + ++ +LC+Y++ DA +L NK V P N ++
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITY 291
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ +++ CN G +A R+ +M +R I ++V+FS +I + K L K +L+++M
Sbjct: 292 SSLISCLCNY-GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I+ + Y+++I+ + +A +++ M K PNVVTYN+LI CKA+++D
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 296 EARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+ + F EM QRG+ TY H F R + + + M +G P TY +L
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQA-RDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ + + V+ + + PD +Y +I + GK + Y++ K+
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALKE 528
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 14/388 (3%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
S E+ +++ + K+ KFD + ++M +L T ILI +C + A+
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN---ILINCFCRCSRLSLAL 133
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGW 182
+ + I LL+ C + DA L+ ++ + +T +F +++G
Sbjct: 134 ALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
+ + EA + M QRG D+V++ +++ K + L L ++M+ IE +
Sbjct: 194 F-LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+Y+ VI +L K R DA++L ME KGV PNV+TY+SLI LC + +A +
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M++R I+P + T+ A +D ++ G+ V L E M K P TY LI F
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ G ++ + P+ +Y LI+ ++++ + + EM ++ L+ T
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 420 LLQDWSY------NKQFVERQIASLKAH 441
L + N Q V +Q+ S+ H
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ DAI L M + P+++ ++ L+ + K K D ++M GIS + TY+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 319 FLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ LL M K+G +P T L+ F + + + +++ E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD ++T LIH LFL+ K EA M ++ P+ T
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 25/324 (7%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM-RGGETGPSL 100
R +AA ++ G A Y T+I+ K+ + + A + DEM GE PS
Sbjct: 160 RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSA 219
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V L I YC + A+ + A+ + + L+ AL DA +
Sbjct: 220 VMYNAL---IGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAV 276
Query: 161 M------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
+ + DVF ++NI++NG+C G+ ++A V+ EMS++G+ V+++ +
Sbjct: 277 LEEMQRNGLSPDVF-----TYNILINGYCKE-GNEKKALEVFEEMSRKGVRATAVTYTSL 330
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I +S+ + + RLF + GI D +YNA+I++ G ++ A +M ME+K +
Sbjct: 331 IYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRI 390
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT--GEEVFGL 332
P+ VTYN+LI+ C +LDEAR DEM +RGI P L + + G++ L
Sbjct: 391 PPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD-------LGLCKNGQGDDAENL 443
Query: 333 LESMRKMGCQPTNDTYIMLIKKFS 356
++ M G P + TYI LI+ +
Sbjct: 444 MKEMVGKGITPDDSTYISLIEGLT 467
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 11/316 (3%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T I++R CA RA+ R + +++ C VQ A +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRPNAVT----YNTVIAGFCARGRVQAALEVMREM 173
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKA 221
+ + ++ +++GWC I G +A +V+ EM +G + V ++ +I Y
Sbjct: 174 RERGGIAPDKYTYATLISGWCKI-GRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
L L+ + M + G+ YN ++HAL DA ++++ M+ G++P+V TY
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTY 292
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRK 338
N LI CK +A + F+EM ++G+ T TY + + R G+ E L + K
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVK 352
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G +P Y LI F++ E+ + PD +Y LI L G+L+E
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412
Query: 399 AHQYYMEMKEKQLLPE 414
A EM ++ + P+
Sbjct: 413 ARGLIDEMTKRGIQPD 428
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 14/262 (5%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLR 229
N ++N ++ G+C G + A V EM +RG I D +++ +IS + K + +
Sbjct: 146 NAVTYNTVIAGFCAR-GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 230 LFDQMKRMG-IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+FD+M G + +YNA+I + A+ + M ++GVA V TYN L+ L
Sbjct: 205 VFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTN 345
+ +A +EM + G+SP + TY+ ++ + G E + E M + G + T
Sbjct: 265 FMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI FSR Q +++ + G PD Y ALI++ G +E A + E
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE 384
Query: 406 MKEKQLLPEPKTDELLQDWSYN 427
M++K++ P+ D +YN
Sbjct: 385 MEKKRIPPD--------DVTYN 398
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 184/467 (39%), Gaps = 92/467 (19%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTREYH 69
FS K+ N + I+++ V EVL RND F G + H++
Sbjct: 60 FSLKQGN--NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLS 117
Query: 70 TMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTK------------QTLLILIRRYCA 115
MI IL + + A + + M R G + +V +LIR Y
Sbjct: 118 AMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQ 177
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 175
+ A AF + F V I+ L+ +L R
Sbjct: 178 ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI------------------------ 213
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
GW + A V+ E+S+ G+ +V + + +++ K + KV Q++
Sbjct: 214 -----GWVEL------AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I A + L+++A LM +M KG +P V TYN++I LCK K +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEEVFG----------------- 331
A++ F EML+ G+SP TY + L D++ T E+VF
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET-EKVFSDMRSRDVVPDLVCFSSM 381
Query: 332 ---------------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
S+++ G P N Y +LI+ + R + NE+ + G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D +Y ++H L L EA + + EM E+ L P+ T +L D
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 15/412 (3%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDW-EAAFTFFLWAGKQSGYAHSTR 66
LRE + +R+K I + L+ S VR W E A+ + + SG +
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIG---SLVRIGWVELAWGVYQEISR-SGVGINVY 236
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+ M+ L K K + + +++ P +VT TL I Y + + A
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL---ISAYSSKGLMEEAFELM 293
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
A F+ G+ + +++ LC++ + A+ + + P ++ ++ +L C
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP-DSTTYRSLLMEACK 352
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G E E+V+ +M R + D+V FS ++S ++++ NL K L F+ +K G+ D
Sbjct: 353 K-GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+Y +I + ++ A++L M ++G A +VVTYN+++ LCK + L EA + F+EM
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 305 LQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+R + P T +D + + L + M++ + TY L+ F +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++W ++ P SY+ L++AL G L EA + + EM K + P
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 30/376 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG + + Y +++ K + +MR + P LV +++ L R
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS---- 388
Query: 118 DVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHL------MFCNKDVF 168
G A + K A I D + L+ CR + A +L C DV
Sbjct: 389 --GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 169 PFNTKSFNIILNGWCN--IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+NT IL+G C ++G EA++++ EM++R + D + + +I + K NL
Sbjct: 447 TYNT-----ILHGLCKRKMLG---EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ LF +MK I D YN ++ K + A + M K + P ++Y+ L+
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQP 343
LC L EA + +DEM+ + I PT+ ++ + R+G G LE M G P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAHQ 401
+Y LI F R F + ++ E G PD +Y +++H +++EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 402 YYMEMKEKQLLPEPKT 417
+M E+ + P+ T
Sbjct: 679 VLRKMIERGVNPDRST 694
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 12/295 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G A Y+T++ L K + A L +EM P TL ILI +C +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD---SYTLTILIDGHCKLG 494
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ A+ F K + + + + LL + ++ A+ + +K++ P S+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP-TPISY 553
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+I++N C+ G EA RVW EM + I V+ + +I Y ++ N ++M
Sbjct: 554 SILVNALCSK-GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK--GVAPNVVTYNSLIKPLCKARK 293
G D YN +I+ + + A L+K MEE+ G+ P+V TYNS++ C+ +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTN 345
+ EA +M++RG++P TY ++ + + E F + + M + G P +
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 50/217 (23%)
Query: 247 NAVIHALAK-GRLVKDAISLMKSMEEKGVA----------------PNVVTYNSLIKPLC 289
+A+IH L + GRL L++ + GV+ N ++ LI+
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ARKL EA +AF + +G + +I +A L+ S+ ++G
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNA-------------LIGSLVRIG--------- 214
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
W + + V+ EIS +G G + + +++AL +GK+E+ + +++EK
Sbjct: 215 --------WVELA--WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 410 QLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSG 446
+ P+ T L +K +E + A P G
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNA-MPGKG 300
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 10/340 (2%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ + A AL D++ G P++VT TL IR C + A+ F +
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTL---IRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L++ LC DA L+ + + P N +F +++ + + G EA+ ++
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NVITFTALIDAFVKV-GKLMEAKELYN 282
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
M Q + DV ++ +I+ L + ++F M+R G + +Y +IH K +
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+D + + M +KGV N +TY LI+ C + D A++ F++M R P IRTY+
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 318 AFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
LD + E+ + E MRK TY ++I+ + + + F ++ +
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
G P+ +YT +I G + EA + +MKE LP
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 50/330 (15%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVF--PFNTKSFNIILNGWCNIIGSSREAERV 195
I DF LLS + + N D +F + P + NI+++ C + A
Sbjct: 83 IIDFTRLLSVIAK-MNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC-LSSQPCRASCF 140
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+M + G D+V+F+ +++ Y + + LFDQ+ MG + + Y +I L K
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC-------------------------- 289
R + A+ L M G PNVVTYN+L+ LC
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 290 ---------KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM- 339
K KL EA++ ++ M+Q + P + TY + ++ G ++GLL+ R+M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN----GLCMYGLLDEARQMF 316
Query: 340 ------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
GC P Y LI F + ++ + K++ E+S+ G + +YT LI L
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G+ + A + + +M ++ P+ +T +L D
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFN----IILNGWCNIIGSSREAERVWMEMSQRGICYDV 208
N + A L C F F ++F+ I+ NG N+ +A ++ M +
Sbjct: 29 NPRTAASLSLCG---FCFWIRAFSSYRKILRNGLHNL--QFNDALDLFTRMVHSRPLPSI 83
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA-----------KGR 257
+ F+ ++S +K V+ LF+QM+ +GI N V+H + G+
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGK 143
Query: 258 LVK------------------------DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++K DAI+L + G PNVVTY +LI+ LCK R
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
L+ A + F++M G P + TY+A + +I R G+ + LL M K +P T+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW-LLRDMMKRRIEPNVITFT 262
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI F + + +++N + + PD +Y +LI+ L + G L+EA Q + M+
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 410 QLLPE 414
P
Sbjct: 323 GCYPN 327
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I KV K A L + M P + T +L I C + A FY
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL---INGLCMYGLLDEARQMFY 317
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNI 185
+R + L+ C+ K V+D + + K V NT ++ +++ G+C +
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQGYC-L 375
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G A+ V+ +MS R D+ +++ ++ + K L +F+ M++ ++ +
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I + K V+DA L S+ KG+ PNV+TY ++I C+ + EA F +M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 306 QRGISPTIRTY 316
+ G P Y
Sbjct: 496 EDGFLPNESVY 506
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 172/418 (41%), Gaps = 70/418 (16%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
++S LV +L V+N E+A FF WAG + + H+ Y+ L + + + A+ L
Sbjct: 54 QLSQRLVGVILHMVKNG-ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRL 112
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
E E P +T ILIR C + A + + + + LL+A
Sbjct: 113 FKEKWPQELIPDSITYG---ILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNA 169
Query: 148 LCRYKNVQDAEHL-----------------------MFCNKDVFPFNTKSFNIILNGWCN 184
LC+ N++ A + ++ + F I N W
Sbjct: 170 LCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTY 229
Query: 185 II--------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ G EAERV EM + +++ +I + KA ++ K L + MKR
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEMPVPTL----ANYTSVIGGHCKAGDMGKAYHLLEDMKR 285
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D YN +IH + + + A L++ M+ P++ TY+ LI LC+A++L E
Sbjct: 286 KGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSE 345
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
AR L +R ++ C P +Y LI FS
Sbjct: 346 ARD-------------------LLGTLRNEDD------------CTPNVVSYNTLIDGFS 374
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + ++++ E+ G PD +Y+ LI L G+ EAH Y EM K++LP+
Sbjct: 375 KAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPK 432
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 180/427 (42%), Gaps = 18/427 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ GY Y+T+I ++++ D A+ L++EM+ + P + T ILI C
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYD---ILIAGLCRA 340
Query: 117 HDVGRAINAFYAYKRFKFAV-GIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTK 173
+ A + + + + L+ + V DA L P +
Sbjct: 341 KRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP-DVV 399
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+++ ++ G CN G + EA EM + I V +S +IS +A L +FD
Sbjct: 400 TYSTLIRGLCNA-GRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDS 458
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G + + VYN++I+ L K + DA +K M E+G +P+ VTY +LI LC+ +
Sbjct: 459 MVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSR 518
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
DEA + L++GI + + + + +R E+ +L + G PT Y +I+
Sbjct: 519 TDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIE 578
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ ++ G PD S+ AL+ A+ K A + EM P
Sbjct: 579 SLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKP 638
Query: 414 EPKTDELLQDWSYN------KQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPE 467
T L + + V R++ S + P +I+ S+QD Q E
Sbjct: 639 SVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQD----QVEE 694
Query: 468 TRRVVRH 474
R V++
Sbjct: 695 ARNVLQE 701
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 149/368 (40%), Gaps = 27/368 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I+ L + + D A + D M P+L +L+ + GR +A
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIY------GLCKTGRLCDAKL 489
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
K D + L+ LCR+ +A C D++ + + I CN
Sbjct: 490 RVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEA-----C--DLYVRSLEQGIEISETSCN 542
Query: 185 IIGSS----REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
++ +S +A+RV + G ++ +I K NL + +L + M GI+
Sbjct: 543 VVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIK 602
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +A++ A+ + A++ ++ M G P+V TY++L+ L KA K EA
Sbjct: 603 PDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVV 662
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTG----EEVFGLLESMR-KMGCQPTNDTYIMLIKKF 355
++ ++ L + EE +L+ ++ K G Q Y L+K
Sbjct: 663 LRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIV-AYNTLLKGL 721
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R R V+++ E+ N + +++ LI G+ + A + EMK K L P
Sbjct: 722 FRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSA 780
Query: 416 KTDELLQD 423
+ L D
Sbjct: 781 AIIKFLVD 788
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 46/298 (15%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK---DVFPFNTKSFNIILNGWC 183
+A R F + + AL R ++A L F K ++ P ++ ++ I++ G C
Sbjct: 79 WAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRL-FKEKWPQELIP-DSITYGILIRGLC 136
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
N G + A ++ EM RG+ V++ +++ K+ NL LR F++M I C
Sbjct: 137 NF-GKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMS--SIPC-A 192
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ +I L + V +A + M+ + PN TY +I L KA K+ EA + E
Sbjct: 193 ATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQE 251
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
M P PT Y +I + G
Sbjct: 252 M------PV------------------------------PTLANYTSVIGGHCKAGDMGK 275
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ + ++ G D +Y LIH +++ A++ EMK +P+ T ++L
Sbjct: 276 AYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDIL 333
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 184/402 (45%), Gaps = 28/402 (6%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV +L + + FF WAGK+ + H Y +I L + R +
Sbjct: 84 LEVLKLKVDHRLVRSILE-IDVEINVKIQFFKWAGKRRNFQHDCSTYMALIRCLEEARLY 142
Query: 82 DTAWALIDEMRGG---ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
+ I E+ GP ++++ L++ V +A++ FY K K
Sbjct: 143 GEMYRTIQEVVRNTYVSVGPVVLSE-----LVKALGRAKMVSKALSVFYQAKGRKCKPTS 197
Query: 139 EDFQGLLSALCRYKNVQDAEH-------LMFCNK-DVFPFNTKSFNIILNGWCNIIGSSR 190
+ ++ L +Q+ +H CN+ D FP +T +++ +++ + +G +
Sbjct: 198 STYNSVILML-----MQEGQHEKVHEVYTEMCNEGDCFP-DTITYSALISSY-EKLGRND 250
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A R++ EM + ++ ++ Y K + K L LF++MKR G Y +I
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K V++A L K+M G+ P+VV N+L+ L K +L+E F+EM +
Sbjct: 311 KGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCT 370
Query: 311 PTIRTYHAFLDIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
PT+ +Y+ + + + EV + M+ G P+ TY +LI + + +
Sbjct: 371 PTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ E+ E G P ++Y +LI+AL + E A++ + E+KE
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 161/387 (41%), Gaps = 48/387 (12%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L DEM+ P T++ L+ Y V V +A++
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQP---TEKIYTTLLGIYFKVGKVEKALD 289
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
F KR + + + L+ L + V++A L K++ + LN N
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLY---KNMLTDGLTPDVVFLNNLMN 346
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIE 240
I+G E V+ EM VVS++ +I + + + +V FD+MK G+
Sbjct: 347 ILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVS 406
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR-------- 292
Y+ +I K V+ A+ L++ M+EKG P Y SLI L KA+
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 293 ---------------------------KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
KL EA F+EM +G P + Y+A + +++
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E LL M + GC +++ +++ F+R +++ + G PD +
Sbjct: 527 AGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVT 586
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEK 409
Y L+ G EEA + EMK+K
Sbjct: 587 YNTLLGCFAHAGMFEEAARLMREMKDK 613
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 11/244 (4%)
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
++W D+M+ PS T ILI YC + V +A+ F +
Sbjct: 394 SSW--FDKMKADGVSPSEFTYS---ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFP-FNTKSFNIILN--GWCNIIGSSREAERVWMEM 199
L++AL + K + A L K+ F +++ + +++ G C G EA ++ EM
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC---GKLSEAVDLFNEM 505
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+G DV +++ ++S KA +++ L +M+ G D +N +++ A+ +
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVP 565
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
+ AI + ++M+ G+ P+ VTYN+L+ A +EA + EM +G TY +
Sbjct: 566 RRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSI 625
Query: 320 LDII 323
LD +
Sbjct: 626 LDAV 629
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIRT-YHAFLDIIRTGEEVFGLLES 335
TY +LI+ L +AR E + E+++ + P + + L + + +
Sbjct: 128 TYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQ 187
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG-PDRSSYTALIHALFLNG 394
+ C+PT+ TY +I + Q V +V+ E+ G+ PD +Y+ALI + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 395 KLEEAHQYYMEMKEKQLLPEPK 416
+ + A + + EMK+ + P K
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEK 269
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 18/293 (6%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNT------KSFNIILNGWCNIIG 187
+ ++ C++ ++DA+H MF C+ D+ NT ++ +++G+C + G
Sbjct: 188 YSSMIDGFCKHSRLEDAKH-MFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV-G 245
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+ A+ ++ EM G+ D+V+ + +++ + L K L +F ++ ++ D N
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 305
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I+ + KG V +A L S+ GV +VVTYN LI K A + EML +
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK 365
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GI P+ TY++ +D EE +++SM GC P T+ LIK + + + +
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDG 425
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++++E+ + G D +Y ALIH G L A + EM + P+ T
Sbjct: 426 LELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTIT 478
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 168/376 (44%), Gaps = 21/376 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + + T++ L + + A AL+D M P VT T+ + C +
Sbjct: 3 ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTI---VNGMCKLG 59
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
D A+N + + + ++ LC+ N A+++ K +FP N ++
Sbjct: 60 DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFP-NVLTY 118
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G+C+ G +AE++ +M +R I DVV+FS +I+ + K + L+ +M
Sbjct: 119 NCMIDGYCSY-GKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK-- 293
R I Y+++I K ++DA + M KG +P+++T N+LI C+A++
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 294 ---------LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGC 341
++ A+ F EM+ G+SP I T + L + G E+ + + +K
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
T ++I + + + ++N + NG D +Y LI G A
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357
Query: 402 YYMEMKEKQLLPEPKT 417
Y+EM K ++P T
Sbjct: 358 IYLEMLCKGIIPSTVT 373
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 141/352 (40%), Gaps = 58/352 (16%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTRE------------YHTMIAILGKVRKFDTAWALIDEMR 92
+ A F+ GK SG RE Y +MI K + + A + D M
Sbjct: 153 FSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMV 212
Query: 93 GGETGPSLVTKQTLLI--------LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
P ++T TL+ LI +C V +V A + F + I L
Sbjct: 213 SKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTL 272
Query: 145 LSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWC-------------------- 183
L+ LC ++ A E K +T + NII+NG C
Sbjct: 273 LAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGV 332
Query: 184 -------NII-------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
NI+ G+ AE +++EM +GI V+++ ++ + K L + +
Sbjct: 333 ETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQ 392
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ D M G D ++ +I K V D + L M ++G+ + +TYN+LI C
Sbjct: 393 MVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFC 452
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRK 338
K L+ A+ F+EM+ G+ P T+ + L + T E+ +LE ++K
Sbjct: 453 KVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N +F ++NG C G +A + M + G D V++ I++ K + L
Sbjct: 7 PANVVTFTTLMNGLCRE-GRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ +M I+ + +Y+A++ L K G +K A ++ M EKG+ PNV+TYN +I
Sbjct: 66 NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIK-AQNIFTEMHEKGIFPNVLTYNCMIDG 124
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPT 344
C K +A Q +M++R I P + T+ A ++ +V G E R+M PT
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPT 184
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA-----------LIHALFLN 393
TY +I F + + + +++ + G PD + LIH
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIASLKAHQ 442
G + A + EM + P+ T + LL N + E+ + K Q
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL-EKALEMFKVFQ 293
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 11/232 (4%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G +VV+F+ +++ + + + L L D+M G + D Y +++ + K
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A+++++ M+E + NVV Y++++ LCK +A+ F EM ++GI P + TY+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 319 FLDIIRTGEEVFG-------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+D G +G LL M + P T+ LI F + + +++ E+
Sbjct: 121 MID----GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREM 176
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P +Y+++I + +LE+A + M K P+ T L D
Sbjct: 177 LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLID 228
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 182/400 (45%), Gaps = 20/400 (5%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLV 101
D A FF WA +Q Y+H Y+TM+ +L K + A ++ M RG E P
Sbjct: 179 DERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPP--- 235
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+ ++ Y + A+ ++ + + L + ++ A L
Sbjct: 236 --EAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKA--LK 291
Query: 162 FCNK----DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
F + + P + ++N ++ G+C++ +A + + +G D VS+ ++
Sbjct: 292 FLERMQVTGIKP-DIVTYNSLIKGYCDL-NRIEDALELIAGLPSKGCPPDKVSYYTVMGF 349
Query: 218 YSKARNLHKVLRLFDQMK-RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K + + +V L ++M + D+ YN +IH L+K DA++ +K ++KG
Sbjct: 350 LCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHI 409
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLL 333
+ V Y++++ C+ ++DEA+ +M RG +P + TY A +D R G +E +L
Sbjct: 410 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKIL 469
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ M K GC+P +Y L+ + ++ N E+ P+ +Y A++H L
Sbjct: 470 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRRE 529
Query: 394 GKLEEAHQYYMEMKEKQLLPEP-KTDELLQDWSYNKQFVE 432
GKL EA EM EK P P + + L+Q N++ VE
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE 569
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 170/400 (42%), Gaps = 42/400 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G S +T I +L K K + A ++ M+ P +VT +L I+ YC +
Sbjct: 262 QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSL---IKGYCDL 318
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---FCNKDVFP---- 169
+ + A+ + ++ LC+ K +++ + LM N ++ P
Sbjct: 319 NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVT 378
Query: 170 FNT-----------------------KSFNIILNGWCNII------GSSREAERVWMEMS 200
+NT K F+I G+ I+ G EA+ + ++M
Sbjct: 379 YNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY 438
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RG DVV+++ I+ + + + + ++ QM + G + + Y A+++ L
Sbjct: 439 SRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSL 498
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+A ++ EE PN +TY +++ L + KL EA EM+++G PT + +
Sbjct: 499 EAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLI 558
Query: 321 DIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ ++V LE GC + +I F + V +++ +G
Sbjct: 559 QSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKH 618
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +YTAL AL G+L+EA + ++M K L P P T
Sbjct: 619 PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 658
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 152/373 (40%), Gaps = 12/373 (3%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G+ Y ++ + + D A +L+ +M P +VT + +
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAI---VD 454
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRY-KNVQDAEHLMFCNKDVFPF 170
+C + + A + + LL+ LC K+++ E + + +
Sbjct: 455 GFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTP 514
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++ +++G G EA + EM ++G V + +I + + + + +
Sbjct: 515 NAITYGAVMHGL-RREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 573
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ G + + VIH + ++ A+S++ M G P+ VTY +L L K
Sbjct: 574 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGK 633
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTND 346
+LDEA + +ML +G+ PT TY H + R +++ LLE M K QP
Sbjct: 634 KGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRV-DDMLNLLEKMLKR--QPFRT 690
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
Y +I+K + K+ ++ + D ++ L+ + G A++ M
Sbjct: 691 VYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRM 750
Query: 407 KEKQLLPEPKTDE 419
+ L P+ K E
Sbjct: 751 FRRNLTPDLKLCE 763
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA++ E +G +VV+F+ +I + + ++ L + D M G D Y A+
Sbjct: 569 EAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALF 628
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL K + +A L+ M KG+ P VTY S+I + ++D+ ++ML+R
Sbjct: 629 DALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--Q 686
Query: 311 PTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P Y+ ++ + EE LL + + + +T +L++ + + + +KV
Sbjct: 687 PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKV 746
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ PD + L L+GKL EA + E+ +
Sbjct: 747 ACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 196/428 (45%), Gaps = 14/428 (3%)
Query: 13 HKRSEMRNKIEECGIKVSSELVSEVLS-WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
H E+ ++++ G K+S + +LS V+ + + + + ++
Sbjct: 147 HSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIF 206
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I L K K + A +I++++ P++VT TL I +C G+ A K
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTL---IDGHCKKGSAGKMYRADAILKE 263
Query: 132 F---KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNII 186
K F L+ C+ +NV A++ + + P N ++N ++NG N
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKP-NIVTYNSLINGLSNN- 321
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA +W +M G+ ++V+F+ +I+ + K + + + +LFD + + + +
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I A K ++++ +L SM ++G+ PNV TYN LI LC+ + + A++ +EM
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441
Query: 307 RGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ + TY+ + + GE + LL M +G +P + TY L+ +
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA 501
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
KV ++ + G + +Y LI GKLE+A++ EM EK L P T ++++
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRL 561
Query: 424 WSYNKQFV 431
K F+
Sbjct: 562 EMLEKGFI 569
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 180/436 (41%), Gaps = 57/436 (13%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D E FF W+ K+ ++ ++ +L +K+ + +D++ E
Sbjct: 57 DSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVF 116
Query: 104 QTLLI--------------LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC 149
+LL+ L+ Y ++ A F + + F + + LLSAL
Sbjct: 117 HSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALV 176
Query: 150 RYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC----------------------NI 185
+ + +++ + + P N +FNI +NG C NI
Sbjct: 177 KGNETGEMQYVYKEMIKRRIQP-NLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNI 235
Query: 186 I---------------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ G A+ + EM IC + ++F+ +I + K N+
Sbjct: 236 VTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNA 295
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F++M+R G++ + YN++I+ L+ + +AI+L M G+ PN+VT+N+LI CK
Sbjct: 296 FEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCK 355
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
+ + EAR+ FD++ ++ + P T++ +D + G EE F L SM G P T
Sbjct: 356 KKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI R + K+ NE+ D +Y LI +G+ +A + EM
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475
Query: 408 EKQLLPEPKTDELLQD 423
+ P T L D
Sbjct: 476 NVGVKPNHVTYNTLMD 491
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 26/385 (6%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
V+E+++ V D E+ FF W K+ Y H+ + +M+ L + R F A D +R
Sbjct: 120 VAEIVA-VHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA----DHIR- 173
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
+++I+ ++ R + F + LL L +++
Sbjct: 174 -------------ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 220
Query: 154 VQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
V+ A +L N + P + +FN ++N + G REAE + ++ Q + DV ++
Sbjct: 221 VEGARNLYKQMLNSGIQP-SLLTFNTLIN-ILSKKGKVREAELILSQIFQYDLSPDVFTY 278
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I + + RNL +FD+M + G + + Y+ +I+ L V +A+ +++ M E
Sbjct: 279 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 338
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EE 328
KG+ P V TY I LC +EA + M +RG P ++TY A + + R G E
Sbjct: 339 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 398
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
GL M K G P TY LI + +F K+++ + +G+ + +Y +I
Sbjct: 399 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 458
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
L L G +E+A + +M + LP
Sbjct: 459 GLCLGGDIEKAMVLFEKMLKMGPLP 483
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 184/388 (47%), Gaps = 16/388 (4%)
Query: 34 VSEVLSWVRN-DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
S +L RN + + AF F K+ G ++ Y T+I L + D A +++EM
Sbjct: 279 TSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P++ T + I CA+ AI K+ ++ + L+S L R
Sbjct: 338 EKGIEPTVYTYT---LPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394
Query: 153 NVQDA---EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV 209
++ A H M K+ NT ++N ++N C + G A +++ M G +
Sbjct: 395 KLEVAIGLYHKML--KEGLVPNTVTYNALINELC-VGGRFSTALKIFHWMEGHGSLANTQ 451
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKDAISLMKS 268
+++ II ++ K + LF++M +MG YN +I+ L KG V +A L+
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN-VNNAARLLDL 510
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
M+E G P+ TYN L+ K KL+ A F EM++ G++P +Y +D +
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 329 V---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
V LLE M +MGC P ++Y +I S+ +F K+ ++++E G P+ +YT
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLP 413
LI L NG+ + A + + +M++++ LP
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLP 658
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 183/416 (43%), Gaps = 46/416 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S +T++ L K + A L +M PSL+T TL+ ++ + V +
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
++ + Y + + + L+ CR +N+ A + + P N+ +++
Sbjct: 260 ELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP-NSVTYST 315
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGI--------------CY----------------- 206
++NG CN G EA + EM ++GI C
Sbjct: 316 LINGLCNE-GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374
Query: 207 ----DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
+V +++ +IS S+ L + L+ +M + G+ + YNA+I+ L G A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + ME G N TYN +IK LC +++A F++ML+ G PT+ TY+ ++
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 323 IRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
T V LL+ M++ GC+P TY L+ FS+W + + + E+ E G P+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQ 434
SYT LI +GK++ A M+E P ++ + ++ S +F E +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 176/425 (41%), Gaps = 77/425 (18%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y+ +I L +F TA + M G SL QT +I+ C
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG---SLANTQTYNEIIKGLCLGG 464
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
D+ +A+ F + + + L++ NV +A L+ C D +
Sbjct: 465 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW--- 521
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N +++G+ G A + EM + G+ + VS++ +I +SK + L L
Sbjct: 522 --TYNELVSGFSKW-GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLL 578
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV------------ 279
++M+ MG + + YNAVI+ L+K +A + M E+G+ PNV+
Sbjct: 579 ERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRN 638
Query: 280 -----------------------TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
TY+SLI LC+ K DEA EM ++G++P T+
Sbjct: 639 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTF 698
Query: 317 HAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK-------------------- 353
+ +D ++ + F LL M +GC+P TY +L+K
Sbjct: 699 TSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV 758
Query: 354 -KFSRWRQ---FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
FS + F V + +SE G P +Y+ L+ L G+ EA Q +MKE+
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 818
Query: 410 QLLPE 414
P+
Sbjct: 819 GFCPD 823
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 33/276 (11%)
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
M CN N +S+N ++NG EAE++ +M+++G+ +V++++ +I +
Sbjct: 584 MGCNP-----NVESYNAVINGLSKE-NRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
++F M++ + Y+++I+ L + +A L+K ME KG+AP+ VT
Sbjct: 638 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 697
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR---------------- 324
+ SLI ++D A M+ G P RTY L ++
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEA 757
Query: 325 -----------TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
E V LL M ++GC+PT DTY L+ R +F ++ ++ E
Sbjct: 758 VYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKE 817
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
G PDR Y +L+ A N +++ A + + ++ K
Sbjct: 818 RGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 21/246 (8%)
Query: 73 AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN--AFYAYK 130
+LG++ D A+ L+ M P+ T LL +++ C + + A+ A Y++
Sbjct: 706 VVLGRI---DHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ V E LL+ + + C + ++T +++G C G
Sbjct: 763 PHEKDVNFEIVSNLLARMSE----------IGCEPTLDTYST-----LVSGLCRK-GRFY 806
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EAE++ +M +RG C D + ++ + K + L++F ++ G + +Y A+I
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 866
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
AL K V++A +L +M EK + + + L+ L K +LD + M + +
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926
Query: 311 PTIRTY 316
P I+TY
Sbjct: 927 PNIQTY 932
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 155/402 (38%), Gaps = 35/402 (8%)
Query: 24 ECGIKVSSELVSEVLSWVRNDWEAAFTF-FLWAGKQSGYAHSTREYHTMIAILGKVRKFD 82
ECG+ + + ++ D + L ++ G + Y+ +I L K +F
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
A + D+M P+++T TL I C A F+ ++ K + +
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTL---IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYS 664
Query: 143 GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ LC+ +AE L+ K + P + +F +++G+ ++G A + M
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAP-DEVTFTSLIDGFV-VLGRIDHAFLLLRRMV 722
Query: 201 QRGICYDVVSFSCII------------------------SCYSKARNLHKVLRLFDQMKR 236
G + ++S ++ S + K N V L +M
Sbjct: 723 DVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSE 782
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+G E Y+ ++ L + +A L+K M+E+G P+ Y SL+ CK ++D
Sbjct: 783 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 842
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + F + +G + Y A + + + G EE L ++M + + +L+
Sbjct: 843 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 902
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
+ + K+ + + P+ +Y L L GK
Sbjct: 903 GLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 131/245 (53%), Gaps = 3/245 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E +RV+ ++ G+ +V S++ II+C+ +A+ + F M+ G+ + +N +I
Sbjct: 412 EGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLI 471
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ K + A L++S+ E G+ P++ T++S++ LC+ ++ +EA + F EM++ GI+
Sbjct: 472 NGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGIN 531
Query: 311 PTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P Y+ + + T +V LL M+K G P +Y LI+ F R + K+
Sbjct: 532 PNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKL 591
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
++ +S +G PD +Y+A I AL +G+LEEA + + M+ P+ L+
Sbjct: 592 FDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQ 651
Query: 428 KQFVE 432
+++VE
Sbjct: 652 QEYVE 656
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 9/214 (4%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ +++ CR K + +A + V P N +FN ++NG C G+ +A ++
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVVP-NLVTFNTLINGHCKD-GAIDKARKLLES 489
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ + G+ D+ +FS I+ + + + L F +M GI + +YN +I +L
Sbjct: 490 LLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGD 549
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V ++ L++ M+++G++P+ +YN+LI+ C+ K+++A++ FD M + G++P TY A
Sbjct: 550 VARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSA 609
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYI 349
F++ + EE + SM GC P D+YI
Sbjct: 610 FIEALSESGRLEEAKKMFYSMEANGCSP--DSYI 641
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 8/246 (3%)
Query: 171 NTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
N S+N+I+N +C ++ ++ EA R +M RG+ ++V+F+ +I+ + K + K
Sbjct: 428 NVFSYNMIINCFCRAKLMDNASEAFR---DMQVRGVVPNLVTFNTLINGHCKDGAIDKAR 484
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+L + + G++ D +++++ L + + ++A+ M E G+ PN V YN LI+ L
Sbjct: 485 KLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSL 544
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTN 345
C + + + M + GISP +Y+A + I + E+ L +SM + G P N
Sbjct: 545 CTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDN 604
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY I+ S + K++ + NG PD +I L +EEA
Sbjct: 605 YTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIER 664
Query: 406 MKEKQL 411
++K +
Sbjct: 665 CRQKGI 670
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 14/307 (4%)
Query: 8 LREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTRE 67
LRE +R + + GI L+ EVL +N+W G +
Sbjct: 375 LRETCDVFEILRKQGVKAGIGAYLALI-EVL--YKNEWREEGDRVYGQLISDGLISNVFS 431
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I + + D A +M+ P+LVT TL I +C + +A
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTL---INGHCKDGAIDKARKLLE 488
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWC 183
+ I F ++ LC+ K ++A + C ++ + N +NI++ C
Sbjct: 489 SLLENGLKPDIFTFSSIVDGLCQIKRTEEA---LECFTEMIEWGINPNAVIYNILIRSLC 545
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G + ++ M + GI D S++ +I + + + K +LFD M R G+ D
Sbjct: 546 TI-GDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDN 604
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+A I AL++ +++A + SME G +P+ N +IK L + ++EA+ +
Sbjct: 605 YTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIER 664
Query: 304 MLQRGIS 310
Q+GIS
Sbjct: 665 CRQKGIS 671
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G + + V+ ++S G+ ++ +I K+ ++ F QM DR
Sbjct: 157 LGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFT 216
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +IH + K +V +A+ L++ M++KG PNV TY LI+ C A ++DEA F+ M
Sbjct: 217 YNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMK 276
Query: 306 QRGISPTIRTYHAFL 320
G+ P T A +
Sbjct: 277 DSGVYPNEATVRALV 291
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F Q+ +G+ ++YNA+I AL K + A + M + TYN+LI +C
Sbjct: 166 VFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVC 225
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTND 346
K +DEA + +M +G P + TY ++ I +E FG+ E+M+ G P
Sbjct: 226 KVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEA 285
Query: 347 TYIMLIKKFSR 357
T L+ R
Sbjct: 286 TVRALVHGVFR 296
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L +++ +G + A++ + + L + + + G++P YN+LI L
Sbjct: 131 LLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALV 190
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTND 346
K+ +D A F +M TY+ + + + G +E L+ M+ G P
Sbjct: 191 KSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVF 250
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
TY MLI+ F + F V+ + ++G P+ ++ AL+H +F
Sbjct: 251 TYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVF 295
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/263 (18%), Positives = 101/263 (38%), Gaps = 47/263 (17%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ +M+ D +++ +I K + + LRL QMK G + Y +I
Sbjct: 202 FQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCI 261
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR-------- 307
V +A + ++M++ GV PN T +L+ + + +A + E L R
Sbjct: 262 ASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVH 321
Query: 308 --------------------------------GISPTIRTYHAFLDIIRTGEEV---FGL 332
G P ++ + + G E+ +
Sbjct: 322 FMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDV 381
Query: 333 LESMRKMGCQPTNDTYIMLIKKF--SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
E +RK G + Y+ LI+ + WR+ G+ +V+ ++ +G + SY +I+
Sbjct: 382 FEILRKQGVKAGIGAYLALIEVLYKNEWREEGD--RVYGQLISDGLISNVFSYNMIINCF 439
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
++ A + + +M+ + ++P
Sbjct: 440 CRAKLMDNASEAFRDMQVRGVVP 462
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+SPT R Y+A +D + + + + M C TY LI +
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ + G+ P+ +YT LI + +++EA + MK+ + P T
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEAT 286
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 192/424 (45%), Gaps = 26/424 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
E+++ + E +S V + L +R +A FF W + G+ H+ + Y MI ILG
Sbjct: 81 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKA-LHFFRWV-EAKGFTHNEQSYFLMIEILG 138
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R + A + + G + + LIR Y +I F K +
Sbjct: 139 RSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSP 198
Query: 137 GIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ F LLS + + A+ L M V P +T +FNI++ G+C +S E
Sbjct: 199 SVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTP-DTYTFNILIRGFCM---NSMVDE 254
Query: 194 RVWM--EMSQRGICYDVVSFSCIISCYSKARNL---HKVLRLFDQMKRMGIECDRKVYNA 248
W EMS+ DVV+++ ++ +A + H V++ + K + + Y
Sbjct: 255 GFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVK-KSPNLSPNVVTYTT 313
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML-QR 307
+I + + +A+SL+ M +G+ PN +TYN+LI+ LC+A+KLD+ ++ + M+
Sbjct: 314 LIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Query: 308 GISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G P T + + + EE F + E M ++ QP + TY +L++ + F
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 365 FKVWNEISEN-------GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++E++E G P ++Y + L NGK ++A + + ++ ++ P
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSY 493
Query: 418 DELL 421
L+
Sbjct: 494 KTLI 497
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 159/329 (48%), Gaps = 14/329 (4%)
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKN---VQDAEHLMFCNKDVF--PFNTKSFN 176
AI++F R + DF LL+++ + K+ + H M D F P N + +
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM----DSFGIPPNIYTLH 100
Query: 177 IILNGWCNII-GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++N +C++ G EA ++ +M G DVV++ +I+ K N +RL M
Sbjct: 101 ILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 160
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ + + YN +I +L K R V +A +L M KG++P++ TYNSLI LC +
Sbjct: 161 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 220
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESM-RKMGCQPTNDTYIML 351
+EM+ I P + +++ +D + + G+ E +++ M ++ GC P +Y L
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + ++ ++ E+ PD +Y+ LIH L +L++A + EM
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340
Query: 412 LPEPKTDELLQDWSYNKQFVERQIASLKA 440
+P T +L D+ +++ +A LKA
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKA 369
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 156/368 (42%), Gaps = 13/368 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I L KV A L+ M P++ T+ I C V
Sbjct: 128 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI---IDSLCKDRQV 184
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFN 176
A N F + I + L+ ALC +K+V + M +K + P + SFN
Sbjct: 185 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK-IMP-DVVSFN 242
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ C G EA V +M QRG C +V+S++ +I+ Y K + + K + LF +M
Sbjct: 243 TVVDALCKE-GKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 301
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R + D Y+ +IH L ++DAI+L M PN+VTY L+ LCK R L
Sbjct: 302 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 361
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
EA + + P I+ + +D + R GE L ++ G QP TY ++I
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
R K++ E+ ENG + Y + N + A Q EM +
Sbjct: 422 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 481
Query: 413 PEPKTDEL 420
+ T L
Sbjct: 482 ADASTMTL 489
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 157/364 (43%), Gaps = 23/364 (6%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH--DVGR 121
ST +++ ++ + K++ T +L +M P++ TL ILI +C ++ +G
Sbjct: 60 STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI---YTLHILINSFCHLNRGKIGE 116
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSF 175
A++ F F + + L++ LC+ N A L+ C +VF +NT
Sbjct: 117 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT--- 173
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I++ C EA ++ EM +GI D+ +++ +I V L ++M
Sbjct: 174 --IIDSLCKD-RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKL 294
I D +N V+ AL K V +A ++ M ++G PNV++YN+LI CK +++
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290
Query: 295 DEARQAFDEMLQRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
D+A F EM ++ + P TY H + R ++ L M P TY +
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL-QDAIALFHEMVACSQIPNLVTYRI 349
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ + R + I + PD I + G+LE A + + K
Sbjct: 350 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 409
Query: 411 LLPE 414
L P+
Sbjct: 410 LQPD 413
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 131/330 (39%), Gaps = 46/330 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R+ A+ L EM P + T +L+ + C V +N
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCN 184
K V F ++ ALC+ V +A + M P N S+N ++NG+C
Sbjct: 231 DSKIMPDVVS---FNTVVDALCKEGKVTEAHDVVDKMIQRGGCMP-NVISYNTLINGYCK 286
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
I +A ++ EM ++ + D V++S +I L + LF +M +
Sbjct: 287 I-QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 345
Query: 245 VYNAVIHALAKGRLVKDAISLMKSME---------------------------------- 270
Y ++ L K R + +A++L+K++E
Sbjct: 346 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 405
Query: 271 -EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE- 327
KG+ P+V TY+ +I LC+ LDEA + F EM + G + Y+ +R E
Sbjct: 406 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 465
Query: 328 -EVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
LL+ M G T + +K S
Sbjct: 466 SRAIQLLQEMVARGFSADASTMTLFVKMLS 495
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G + Y+T+I K+++ D A L EM E P VT T LI C V
Sbjct: 266 QRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST---LIHGLCHV 322
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKS 174
+ AI F+ + ++ LL LC+ + + +A L+ ++ P + +
Sbjct: 323 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP-DIQV 381
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
NI ++G C G A ++ +S +G+ DV ++S +I+ + L + +LF +M
Sbjct: 382 NNIAIDGMCR-AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 440
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
G + +YN + + AI L++ M +G + + T +K L
Sbjct: 441 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 494
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 40/196 (20%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ AIS M P+ V +N L+ + K + +M GI P I T H
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 319 FL----------------------------DIIRTGEEVFG------------LLESMRK 338
+ D++ G + G LL SM +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
CQP Y +I + RQ F +++E+ G PD +Y +LIHAL + +
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221
Query: 399 AHQYYMEMKEKQLLPE 414
EM + +++P+
Sbjct: 222 VATLLNEMVDSKIMPD 237
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 175/409 (42%), Gaps = 12/409 (2%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREY 68
K E+ ++ + G+ S+ + V+ + ND W+ A + F SG + Y
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAF-TY 389
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +I L + RK A L ++M P +VT +LL+ YC + A+ +
Sbjct: 390 NILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC---YCVNGCMDEAVKLYTE 446
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIG 187
F + + L+ A L+ ++ N ++N ++NG C ++G
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC-VVG 505
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E + G ++++ II+ + KA + ++ QM GI + Y
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+ I K A+ ++ + KG+ P++ YNSLI C+ + A Q ML+
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKD 625
Query: 308 GISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ P I Y++F+ ++ EE L E M K G TY LI FS+
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
K+++E+ GN PD ++TAL H L NG +++A + EM + P
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y+++I K +A+A+ +M P++VT + I YC
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSF---IDGYCKTSCC 577
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNII 178
A+ + I + L+ C+ N+ A + L+ KD N +N
Sbjct: 578 DLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G+ N+ EA R++ +M + GI D +++ +I +SK N+ L+L+ +M G
Sbjct: 638 ITGYKNL-KMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D + A+ H L + + DA L+ M + PNV+ YN LI + KL EA
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+ DEML+R I P TY + + G +
Sbjct: 757 RLHDEMLERKIMPDDTTYDILVGMKSLGSD 786
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 156/376 (41%), Gaps = 52/376 (13%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
+D A L DEM E P ++ + I C + D RA+ + F
Sbjct: 193 YDDAVRLFDEMPASEIEPD---QRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFT 249
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL-----NGWCNIIGSSREAERV 195
F ++ L + +++A H+ KD K +++L +G+C + R+A +
Sbjct: 250 FNSVVDVLVKGGRMEEALHI----KDELLATGKKMSVVLATTLMHGYC-LQREVRKALDI 304
Query: 196 WMEMSQRGICYDVVSFSCII-SCYS-----KARNLHKVLR-------------------- 229
+ E + G+ V+++ +I C KA L + +R
Sbjct: 305 FEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN 364
Query: 230 ---------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
LF +M GI D YN +IH L + R +++A++L + M E GV P +VT
Sbjct: 365 DKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMR 337
Y+SL+ C +DEA + + EM +G +P + TY + I + ++ + LL M+
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G + TY LI + V ++ G P +Y ++I+ G +
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543
Query: 398 EAHQYYMEMKEKQLLP 413
A Y +M K + P
Sbjct: 544 SAFAVYQQMCAKGIPP 559
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 150/369 (40%), Gaps = 43/369 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G YH+++ D A L EM G P++VT TL+ + +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM---KGHINKA 470
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFN 176
+A K+ + + L++ LC V + E L + F ++N
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYN 530
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+NG+ G A V+ +M +GI ++V+++ I Y K L++ + ++
Sbjct: 531 SIINGFIKA-GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D YN++I + + A+ ++ M + G+ PN+ YNS I + ++E
Sbjct: 590 KGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEE 649
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD----------------------------------- 321
A + +++M++ GI TY +D
Sbjct: 650 ALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTH 709
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G+ + LL+ M ++ +P Y MLI + R + F++ +E+ E P
Sbjct: 710 GLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMP 769
Query: 379 DRSSYTALI 387
D ++Y L+
Sbjct: 770 DDTTYDILV 778
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 39/315 (12%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + F++++ C G +A R++ EM I D S I+ K R+ ++ L
Sbjct: 174 PLDAWMFDVVMRA-CFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ +M+ G +N+V+ L KG +++A+ + + G +VV +L+
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTN 345
C R++ +A F+E L+ G+ PT TY + G E+ + L MR G P+
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352
Query: 346 DTYIMLIKKF---SRWRQFGNVFK-------------------------------VWNEI 371
+ + M+IK W+ ++FK +W ++
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
+E G P +Y +L+ +NG ++EA + Y EM K P T L NK
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 432 ERQIASLKAHQPQSG 446
++ A L A Q+G
Sbjct: 473 DKAYA-LLAEMKQNG 486
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG+ D S + +++ +++ + L L +M+ G D +++ V+ A K +
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA+ L M + P+ + I LCK R + A +M G P T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D++ G EE + + + G + + L+ + R+ ++ E +G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P +YT LI G E+A++ +M++ LLP
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 16/362 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K A ++D E P ++T ILI C VG+A+
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYT---ILIEATCNDSGVGQAMKLLD 268
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILNGW 182
++ + + L++ +C+ + +A + F N P N + NIIL
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEA--IKFLNN--MPLYGCQPNVITHNIILRSM 324
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +AER+ +M ++G VV+F+ +I+ + R L + + + ++M + G +
Sbjct: 325 CST-GRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN ++H + + + AI ++ M +G P++VTYN+L+ LCK K D A + +
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G SP + TY+ +D + + G+ + LLE MR+ G +P TY L++
Sbjct: 444 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEG 503
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ K+++++ P +Y A++ L + A + M EK P T
Sbjct: 504 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYT 563
Query: 420 LL 421
+L
Sbjct: 564 IL 565
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 144 LLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L+ CR + A +M N P + ++N+++ G+C S E ++ + +
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVP-DVITYNVLIGGYCK----SGEIDKALQVLER 202
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFD-QMKRMGIEC--DRKVYNAVIHALAKGRL 258
+ DVV+++ I+ + L + + + D QM+R EC D Y +I A
Sbjct: 203 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR---ECYPDVITYTILIEATCNDSG 259
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A+ L+ M +KG P+VVTYN LI +CK +LDEA + + M G P + T++
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319
Query: 319 FL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L + TG + LL M + GC P+ T+ +LI R R G V ++ ++G
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
P+ SY L+H K++ A +Y M + P+
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 418
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 7/263 (2%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G E + M +G DV++ + +I + ++ K R+ + ++ G D Y
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I K + A+ +++ M VAP+VVTYN++++ LC + KL EA + D +Q
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQ 237
Query: 307 RGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R P + TY ++ V LL+ MRK GC+P TY +LI + +
Sbjct: 238 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 297
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
K N + G P+ ++ ++ ++ G+ +A + +M K P T +L +
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Query: 424 WSYNKQFVERQIASLKAHQPQSG 446
+ K+ + R I L+ P+ G
Sbjct: 358 FLCRKRLLGRAIDVLE-KMPKHG 379
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
D L D +R G PS+VT ILI C +GRAI+ +
Sbjct: 331 MDAERLLADMLRKG-CSPSVVTFN---ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386
Query: 141 FQGLLSALCRYKNVQDA-EHL-MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ LL C+ K + A E+L + ++ +P + ++N +L C G + A + +
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-DIVTYNTLLTALCKD-GKADAAVEILNQ 444
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+S +G +++++ +I +K L ++M+R G++ D Y+ ++ L
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +AI + ME + P+ VTYN+++ LCKA++ A M+++G PT TY
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 319 FLDII 323
++ I
Sbjct: 565 LIEGI 569
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L + L+ ++M G D ++I + + A +M+ +E G P+V+TYN
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
LI CK+ ++D+A Q + M ++P + TY+ I+R+ + L E+M + Q
Sbjct: 183 LIGGYCKSGEIDKALQVLERM---SVAPDVVTYNT---ILRSLCDSGKLKEAMEVLDRQM 236
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ Y PD +YT LI A + + +A +
Sbjct: 237 QRECY-----------------------------PDVITYTILIEATCNDSGVGQAMKLL 267
Query: 404 MEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
EM++K P+ T +L + + ++ I L + P G VI+
Sbjct: 268 DEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN-NMPLYGCQPNVIT 316
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 169/398 (42%), Gaps = 50/398 (12%)
Query: 48 AFTFFLWAGKQSGY--AHSTREYHTMIAILGKVRKFDTA------------------WAL 87
A F W KQ G H T Y IL K R +D+A AL
Sbjct: 93 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+D + PS+ +LIR Y + A+ F F + +L++
Sbjct: 153 MDTYPLCNSIPSVFD-----LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
+ + K + L +K + P N +FNI++NG C + G+ ++A + +M + G
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICP-NVGTFNILINGLC-VEGNLKKAGNLLKQMEENGFV 265
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+V+++ +++ Y K + L D M GIE D YN I L A L
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI--- 322
+K M ++ ++PN VTYN+LI K K+ A Q F+EM + +SP TY+A +
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV---FKVWNEISENGNGPD 379
+ EE LL+ M G R + GNV KV+ ++ NG+G D
Sbjct: 386 VGDFEEALRLLDHMEAAGL---------------RLNEHGNVTEAMKVYAVMNCNGHGAD 430
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ L+ +L +GKL EA ++ M L+P T
Sbjct: 431 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 468
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 183/458 (39%), Gaps = 45/458 (9%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K + ++EE G + + +L+W + ++AA + G Y+
Sbjct: 251 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM-ICKGIEADVCTYNVF 309
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I L + A+ L+ +MR P+ VT TL I + +G A F +
Sbjct: 310 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL---INGFVKEGKIGVAAQVFNEMSK 366
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDA---------------EH-----------LMFCN- 164
F + + L+ C + ++A EH +M CN
Sbjct: 367 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNG 426
Query: 165 --KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
D F + N++++ C G EAE+ MS+ G+ + +++ CII+ Y
Sbjct: 427 HGADHF-----TCNVLVSSLCRD-GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 480
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ FD M + G Y +++ L KG + +A + + A + V YN
Sbjct: 481 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 540
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLLESMRKMG- 340
+L+ CK+ L EA FD+M+Q + P TY + L + R G+ V + MG
Sbjct: 541 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 600
Query: 341 --CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
P + Y L+ S+ F + E+ + G PD ++ A+I + G++ +
Sbjct: 601 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 660
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIA 436
A+ ++ M+ + P T +L KQ + R ++
Sbjct: 661 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLS 698
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 172/462 (37%), Gaps = 97/462 (20%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G ++ Y +I G + A++ D+M PS T +LL +
Sbjct: 453 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL---K 509
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKD 166
C G + A R + G D + LL+ C+ N+ +A L +
Sbjct: 510 GLC---KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 566
Query: 167 VFPFNTKSFNIILNGWC-----------------------------------NIIGSSRE 191
V P ++ +++ +L G C + G +
Sbjct: 567 VLP-DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 625
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A + EM ++G C D V+F+ II S+ + K F M+ G+ + YN ++H
Sbjct: 626 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 685
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA------------RKLDEARQ 299
+K + + +SL +M +G+ P+ +T++SLI L K+ ++E+
Sbjct: 686 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV 745
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG-------------------------------- 326
EML+ G+ P Y ++ + R G
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805
Query: 327 -----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
E+ +L+ M +M PT T+ L+ +F R + K+ + G D
Sbjct: 806 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 865
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+Y LI + NG A + Y EM+ + L P T +L D
Sbjct: 866 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 907
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG C + G + A ++ EM G V+ S ++ + + D M RM
Sbjct: 765 LINGMCRV-GDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRM 823
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + ++H + + +A+ L ME G+ +VV YN LI +C A
Sbjct: 824 RLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAA 883
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+ ++EM R + P I TY +D I +
Sbjct: 884 FELYEEMRHRDLCPNITTYAVLVDAISAANNLI 916
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 146/405 (36%), Gaps = 111/405 (27%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++A K A AL D+M P T +LL + R G+A+ A
Sbjct: 539 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK------GKAVTAVC 592
Query: 128 AYKRFKFAVGIED-FQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----------NTKSF 175
F A+G F + C + A H K F F +T +F
Sbjct: 593 L---FGTAMGRGTLFPNHVMYTCLVDGLSKAGH----PKAAFYFFEEMMKKGTCPDTVAF 645
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N I++ C+ G +A + M G+C ++ +++ ++ +SK + L + L L+ M
Sbjct: 646 NAIIDS-CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 704
Query: 236 RMGIECDRKVYNAVIHALAK-----------GRLV-KDAISLMKSMEEKGVAPNVVTYNS 283
R GI D+ ++++I L+K G+++ +++ ++ M E GV P Y +
Sbjct: 705 REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYIT 764
Query: 284 LIKPLCK-----------------------------------ARKLDEARQAFDEMLQRG 308
LI +C+ K ++A D ML+
Sbjct: 765 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 824
Query: 309 ISPTIRTY----HAF----------------------LDIIRTGEEVFG----------- 331
+ PTI T+ H F LD++ + G
Sbjct: 825 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 884
Query: 332 -LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L E MR P TY +L+ S K+ ++ E G
Sbjct: 885 ELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 929
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 144 LLSALCRYKNVQDA-------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
L++ +CR ++Q A E L F + +V + + ++ G + G + +A V
Sbjct: 765 LINGMCRVGDIQGAFKLKDEMEALGFGSHEV------AESAMVRGLLHC-GKTEDAMLVL 817
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M + + + +F+ ++ + + + + L+L M+ G++ D YN +I +
Sbjct: 818 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 877
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
A L + M + + PN+ TY L+ + A L + + ++ +RG+
Sbjct: 878 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 930
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 163/347 (46%), Gaps = 20/347 (5%)
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
+L ILI +C +H V ++ + I F LL+ LC + + +M
Sbjct: 98 HSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKM---DQVMML 154
Query: 164 NKDVF-----PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
D+ P N ++N+I+N G + EA +M + G +VV++S +I Y
Sbjct: 155 YDDMLVRGLQP-NVYTYNVIINSLSKS-GKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
+ + +FD M G + Y ++++ K +++A+ L+ KG+ P++
Sbjct: 213 CLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDI 272
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLES 335
VT+ ++I LC+A + A+Q F + G +P I TY LD + + G EE F L +
Sbjct: 273 VTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQE 332
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M++ +P Y +LI + + + ++++ + + G P+ +YTAL+ AL G
Sbjct: 333 MQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGL 392
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELL-------QDWSYNKQFVERQI 435
+ EAH+ + +M+E P+ ++ +D S +Q VE +
Sbjct: 393 IIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 134/261 (51%), Gaps = 14/261 (5%)
Query: 171 NTKSFNIILNGWCNI----IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ S +I++N +C++ G S V ++ + G+ +V+F+ +++ + +
Sbjct: 96 DIHSLSILINCFCHLHRVDFGLS-----VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQ 150
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
V+ L+D M G++ + YN +I++L+K +A+ +K ME+ G PNVV Y++LI
Sbjct: 151 VMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD----IIRTGEEVFGLLESMRKMGCQ 342
C ++DEAR FD M+ +G +P + TY + ++ I R E V L E++RK G
Sbjct: 211 GYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRK-GLV 269
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P T+ +I R + +++ I +G+ P+ +Y L+ L +G LEEA
Sbjct: 270 PDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFAL 329
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
+ EM+ + P +L D
Sbjct: 330 FQEMQRSTVKPNLVIYTILID 350
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 142/332 (42%), Gaps = 10/332 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + T++ L K D L D+M P++ T ++I
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYN---VIINSLSKSGKA 183
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A+ ++ + ++ L+ C + +A + + +K P N ++
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTP-NVYTYTS 242
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++NG+C I EA ++ E ++G+ D+V+F+ IIS +A +LF +
Sbjct: 243 LMNGYCKI-ERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + Y ++ L K +++A +L + M+ V PN+V Y LI LCK K+ +
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ F ++ G+ P + TY A + + + G E L M + GC P Y ++I+
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQG 421
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
F + + ++ E+ G D ++ L
Sbjct: 422 FLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 10/381 (2%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ ++ + T++ LGK D A + +M PSL+T T++ ++ + V +
Sbjct: 163 FGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAK 222
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNII 178
++ + Y + A + L+ CR N+ D MF KD N+ +++ +
Sbjct: 223 LIMSHIFRYDAYPNAF---TYTSLILGHCRNHNL-DLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+NG C+ G EA + EM Q+GI V +++ + A + + L +MK+ G
Sbjct: 279 INGLCSE-GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + + A+I L++ + AI L M G+ P VTYN+LI LC + + A
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F ML G P+ +TY+ + ++ ++ + + M K G P TY LI +
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ N ++ + NG PD +YT LI GKLE A + M E + P
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 416 KTDELLQDWSYNKQFVERQIA 436
T + D +N V+ +A
Sbjct: 518 VTYTAIIDGYFNLAKVDDALA 538
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG S ++TMI IL K + A ++ + + P+ T +L++ +C H
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL---GHCRNH 251
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ A F + + L++ LC +++A ++ K + P ++
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP-TVYTY 310
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I L C+ G S EA + +M +RG ++ +F+ +IS S+ + L+ +M
Sbjct: 311 TIPLVSLCDA-GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ YNA+I+ L + A ++ K M G P+ TYN +IK C +
Sbjct: 370 ADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQ 429
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A FD+ML+ G SP + TY+ + + G LLE M+ G +P TY LI
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
FSR + + ++ + E+G P+ +YTA+I F K+++A + +M E L
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549
Query: 413 PEPKT 417
P +T
Sbjct: 550 PSSQT 554
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + + + +I+ L + KF+ A L +M P+ VT L
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL---------- 383
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
IN RF+ A I F+ +LS P +T+++N
Sbjct: 384 ------INQLCVEGRFETAFTI--FKWMLS------------------HGSLP-STQTYN 416
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ +C ++G ++A ++ +M + G +V++++ +I Y K NL+ +RL + MK
Sbjct: 417 EIIKCFC-LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I ++G ++ A SL M E G++PN VTY ++I K+D+
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
A F +M++ G P+ +TY+ + + I E G M K G P TY
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG---KMVKQGLLPNVITYTS 592
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
I R + G FK+++E+ + P+ +Y++LI+ L G+ E+A Y + +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 411 LLPEPKTD 418
EP D
Sbjct: 653 YGCEPNVD 660
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 183/441 (41%), Gaps = 46/441 (10%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHT 70
S + E+ K+++ G + + + ++S + D + L+ + G +T Y+
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I L +F+TA+ + M + PS QT +I+ +C + D+ +A+ F
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPS---TQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCNIIGSS 189
+ + + + L+ C+ N+ +A L+ K + + ++ +++G+ G
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG-GKL 498
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A ++ M + GI + V+++ II Y + L LF +M G + YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I +K + +A + M ++G+ PNV+TY S I LC+ + A + F EM +R
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 310 SPTIRTYHAFL-DIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFS-------- 356
P + TY + + + + G E++ LL + GC+P DTY L+K
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 357 -------------------RWRQFG--------NVFKVWNEISENGNGPDRSSYTALIHA 389
R G + ++ + G S Y ALI A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 390 LFLNGKLEEAHQYYMEMKEKQ 410
L +EEA + M EK
Sbjct: 739 LCKENFIEEAQCIFQTMLEKH 759
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 120/312 (38%), Gaps = 47/312 (15%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
W +SG S++ Y+ MI+ K A +M P+++T + I
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF---ID 595
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF--- 168
C G A F+ ++ + + + L+ LC+ +DAE +
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655
Query: 169 -PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++ ++ G C G CY+
Sbjct: 656 EP-NVDTYTTLVKGLCG-----------------EGRCYEAD------------------ 679
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+L M++ G++ ++Y A++ K V+ A+++ SM+ G ++ Y +LI
Sbjct: 680 -QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPT 344
LCK ++EA+ F ML++ + + LD +++ GE LL M C
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLN 798
Query: 345 NDTYIMLIKKFS 356
TY+ML ++ S
Sbjct: 799 FQTYVMLARELS 810
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 11/245 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T+ +LNG C + + +R + + + D+V+F+ +I+ + + L + +
Sbjct: 8 DTRVCTALLNGLCK----TGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSV 63
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++ R G E D YN I L K V DA L+K M+EK P VTY +L+ L K
Sbjct: 64 LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDT 347
A +LDEA ++M+++G SPT++TY +D + + G EE + M GC+P
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNG----PDRSSYTALIHALFLNGKLEEAHQYY 403
Y LI ++ + N++ ENG PD + +I L +G LE+A Y+
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243
Query: 404 MEMKE 408
E+ +
Sbjct: 244 DELDD 248
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 103/443 (23%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM------RGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
Y +I+ L K+ K D A +++M RG E P +V ++IR+ CA ++
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVE--PDVVIHN---LVIRQLCASGNLED 238
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA------------------------ 157
A+ A++ + F L++ALC+ + ++A
Sbjct: 239 AL-AYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297
Query: 158 ---------EHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
E L+ + V F + ++ I++G C + G E + EM RG
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKL-GRVEEGCERFHEMRNRGYE 356
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRL------ 258
D V+++ +I + KA+ + K R++ QM + G YN ++ L K GR+
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416
Query: 259 ----------------------------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
V A+ L + M ++G PN+V+YN +I+ LC+
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAF-------LDIIRTGEEVFGLLESMRKMGCQP 343
A KL +A F+++LQR + P + T+++F LD + G E+F ESM G P
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELF---ESMVSQGTSP 533
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+Y +L+ R ++++E+ G PD + LI L + G+++EA + +
Sbjct: 534 NLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 593
Query: 404 MEMKEKQLLPEPKTDELLQDWSY 426
E+ E++ P+ WSY
Sbjct: 594 REL-ERRSAPDA--------WSY 607
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 169/431 (39%), Gaps = 53/431 (12%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
TR ++ L K + D A L+DEM P +V ++I C + A +
Sbjct: 9 TRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVA---FTVVINGLCREKRLDEAFS 62
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
R + + LC+ + V DA L+ K P T ++ +++G
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLP-TTVTYTALVDGL 121
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G EA + +M ++G + +++ +I SKA + + R+F M G D
Sbjct: 122 LKA-GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 180
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEE----KGVAPNVV------------------- 279
VY A+I LAK + +A+ + M E +GV P+VV
Sbjct: 181 AFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240
Query: 280 ---------------TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----HAFL 320
T+N L+ LCKA + +EA +M +R PT+ TY FL
Sbjct: 241 AYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFL 300
Query: 321 DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ R E + L E++ + G P TY +I + + + ++E+ G PD
Sbjct: 301 KLGRLDEALLQLKEAVER-GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+Y ALI + +AH+ Y +M + + T ++ D V A+ A
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419
Query: 441 HQPQSGQNTRV 451
+ + T V
Sbjct: 420 MEERGCVATVV 430
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 15/260 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWA--LIDEMRGGETGPSLVTKQTLLILIRRYCA 115
QSG ST Y+ ++ L K + A+A L E RG + T T L+ +C+
Sbjct: 387 QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG-----CVATVVTYSALMDGFCS 441
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFN 171
+V A+ F + + ++ LCR + A E L+ + + P +
Sbjct: 442 EGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL--QRRLCP-D 498
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+FN L+G C + + + ++ M +G ++ S+S ++ +A L L +F
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M G+ D V+N +I L V +A+ + + +E + AP+ +Y SL+ L +
Sbjct: 559 HEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRC 617
Query: 292 RKLDEARQAFDEMLQRGISP 311
+++EAR M +G +P
Sbjct: 618 ERMEEARLLSFHMKLQGCAP 637
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 11/350 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+F A +L+D M G P++V T+ I C D+ A+ FY ++
Sbjct: 689 RFQEAVSLVDSMDGFGFVPNVVIYNTV---INGLCKNRDLNNALEVFYCMEKKGIRADAV 745
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+S L DA L+ + + P N F +++ + G+ EA ++
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDP-NVIFFTALIDTFVKE-GNLLEARNLYK 803
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +R + +V +++ +I+ + L +FD M G D YN +I K +
Sbjct: 804 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 863
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+D + L M +G+ + TYN+LI C+A KL+ A++ F+ M+ G+SP I TY+
Sbjct: 864 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 318 AFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
LD + E+ ++E ++K TY ++I+ R + + ++ ++
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 983
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQD 423
G PD +Y +I L G EA + MKE +P + DE L+D
Sbjct: 984 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 1033
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 24/375 (6%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
KFD A++L EM PS+V +L +I + ++ I ++ + + +
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAK---MNKFDIVIYLYHKMENLGISHDLY 640
Query: 140 DFQGLLSALCRYKNVQDAE----HLMFCNKDVFPFNTKSFNIILNGWCNIIGSS-REAER 194
F L+ CR + A +M K F + + +LNG+C G+ +EA
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMM---KLGFRPSIVTLGSLLNGFCQ--GNRFQEAVS 695
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ M G +VV ++ +I+ K R+L+ L +F M++ GI D YN +I L+
Sbjct: 696 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 755
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
DA L++ M ++ + PNV+ + +LI K L EAR + EM++R + P +
Sbjct: 756 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
TY++ ++ G + G L + M GC P TY LI F + ++ + K+
Sbjct: 816 TYNSLIN----GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ E++ G D +Y LIH GKL A + + M + + P+ T +L D N
Sbjct: 872 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931
Query: 428 KQFVERQIASLKAHQ 442
+E+ + ++ Q
Sbjct: 932 NGKIEKALVMVEDLQ 946
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 14/365 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +H + +I + + A +++ +M PS+VT +LL +C V+ +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL---HGFCLVNRI 157
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNII 178
G A + + + + + L+ LC+ + A E L K + ++N +
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L G C G +A R+ +M +R I DVV+F+ +I + K NL + L+ +M +
Sbjct: 218 LTGLC-YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ + YN++I+ L + DA M KG PNVVTYN+LI CK R +DE
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 299 QAFDEMLQRGISPTIRTY----HAFLDI--IRTGEEVFGLLESMRKMGCQPTNDTYIMLI 352
+ F M G + I TY H + + +R ++F + S R P T+ +L+
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR---VTPDIITHCILL 393
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ + ++++ E+ +Y +IH L K+E+A + + + + +
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 413 PEPKT 417
P+ +T
Sbjct: 454 PDART 458
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI +D+ SF+ +I C+ + L L + +M ++G E + +++H
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ DA SL+ M + G PNVV YN+LI LCK +L+ A + +EM ++G+ + TY+
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L + +G + +L M K P T+ LI F + +++ E+ ++
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +Y ++I+ L ++G+L +A + + M K P T
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 170/386 (44%), Gaps = 42/386 (10%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
AF+ + K SGY + Y+T+I L K + + A L++EM G +VT TLL
Sbjct: 160 AFSLVILMVK-SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
+ D R + KR + F L+ + N+ +A+ L
Sbjct: 219 TGLCYSGRWSDAARMLRDM--MKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P N ++N I+NG C + G +A++ + M+ +G +VV+++ +IS + K R +
Sbjct: 276 SVDP-NNVTYNSIINGLC-MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ ++LF +M G D YN +IH + ++ A+ + M + V P+++T+ L+
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTN 345
LC +++ A FD+M R E+ G++
Sbjct: 394 HGLCVNGEIESALVKFDDM-------------------RESEKYIGIV------------ 422
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
Y ++I + + ++++ + G PD +YT +I L NG EA +
Sbjct: 423 -AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 406 MKEKQLLPE--PKTDELLQDWSYNKQ 429
MKE+ ++ + + D L + S NK+
Sbjct: 482 MKEEGIICQMNAEDDHLEEHSSSNKE 507
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A ++ EM +V F+ +++ + R V+ +M+ GI D + +I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H + + A+S++ M + G P++VT+ SL+ C ++ +A M++ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 311 PTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + Y+ +D + + GE LL M K G TY L+ ++ + ++
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ + PD ++TALI G L+EA + Y EM + + P T
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+ ++ A A R + I + ME G++ ++ ++ LI C+ +L A +M+
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 306 QRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ G P+I T+ H F + R G+ F L+ M K G +P Y LI + +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGD-AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ NE+ + G G D +Y L+ L +G+ +A + +M ++ + P+ T L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 422 QD 423
D
Sbjct: 253 ID 254
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 199/453 (43%), Gaps = 50/453 (11%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQ-SGYAHSTREYHTMIAILGKVRK 80
++ C + +S +SE L ++ + + L Q G + Y+ +I +L K K
Sbjct: 181 VDSCNLFISH--LSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 238
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
A ++ EM P V TL I +C + +V A F ++ K +
Sbjct: 239 VAEAERVLREMISEGIAPDGVIYTTL---IDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 295
Query: 141 FQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ ++ LC+ V +A+ H M C + + ++ +++G+C G +EA +
Sbjct: 296 YTAVICGLCQTGRVMEADKLFHEMVCKR--LEPDEVTYTALIDGYCKE-GKMKEAFSLHN 352
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M Q G+ ++V+++ + K + L +M R G+E + YN++++ L K
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ A+ LMK ME G P+ VTY +L+ CK+R++ A + +ML R + PT+ T++
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472
Query: 318 AFLD------IIRTGEEVF------GLL-----------------------ESMRKM--- 339
++ ++ GE++ G++ E R M
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P +TY +LIK + R + + ++ G SSY ALI + K EA
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 592
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+ + +M+ + L+ + + + D +Y++ +E
Sbjct: 593 RELFEQMRREGLVADREIYNIFADINYDEGKME 625
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 159/395 (40%), Gaps = 39/395 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT----------------- 102
G A Y T+I K+ +A+ L DEM+ + P +T
Sbjct: 253 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312
Query: 103 ---------------KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+ T LI YC + A + + I + L
Sbjct: 313 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ V A L+ C K + N ++N ++NG C G+ +A ++ +M G
Sbjct: 373 LCKCGEVDTANELLHEMCRKGL-ELNIYTYNSLVNGLCKA-GNIDQAVKLMKDMEVAGFH 430
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D V+++ ++ Y K+R + + L QM ++ +N +++ +++D L
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---I 322
+K M EKG+ PN TYNSLIK C + + + M +G+ P TY+ +
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R +E + L M G T +Y LIK F + ++F +++ ++ G DR
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
Y + GK+E + E EK L+ + +T
Sbjct: 611 YNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 297 ARQAFDEMLQRGISPTIRTYHAF-------LDIIRT---GEEVFGLLESMRKMGCQPTND 346
AR+ FD+ML G+ ++ + + F LD I+ GE V L+E M+ G +P
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +I + + +V E+ G PD YT LI G + A++ + EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 407 KEKQLLPE 414
+++++ P+
Sbjct: 285 QKRKISPD 292
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 10/381 (2%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
+ ++ + T++ LGK D A + +M PSL+T T++ ++ + V +
Sbjct: 163 FGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAK 222
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNII 178
++ + Y + A + L+ CR N+ D MF KD N+ +++ +
Sbjct: 223 LIMSHIFRYDAYPNAF---TYTSLILGHCRNHNL-DLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+NG C+ G EA + EM Q+GI V +++ + A + + L +MK+ G
Sbjct: 279 INGLCSE-GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + + A+I L++ + AI L M G+ P VTYN+LI LC + + A
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F ML G P+ +TY+ + ++ ++ + + M K G P TY LI +
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ N ++ + NG PD +YT LI GKLE A + M E + P
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 416 KTDELLQDWSYNKQFVERQIA 436
T + D +N V+ +A
Sbjct: 518 VTYTAIIDGYFNLAKVDDALA 538
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG S ++TMI IL K + A ++ + + P+ T +L++ +C H
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL---GHCRNH 251
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ A F + + L++ LC +++A ++ K + P ++
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP-TVYTY 310
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
I L C+ G S EA + +M +RG ++ +F+ +IS S+ + L+ +M
Sbjct: 311 TIPLVSLCDA-GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ YNA+I+ L + A ++ K M G P+ TYN +IK C +
Sbjct: 370 ADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQ 429
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A FD+ML+ G SP + TY+ + + G LLE M+ G +P TY LI
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
FSR + + ++ + E+G P+ +YTA+I F K+++A + +M E L
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549
Query: 413 PEPKT 417
P +T
Sbjct: 550 PSSQT 554
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 47/368 (12%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G + + + +I+ L + KF+ A L +M P+ VT L
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL---------- 383
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
IN RF+ A I F+ +LS P +T+++N
Sbjct: 384 ------INQLCVEGRFETAFTI--FKWMLS------------------HGSLP-STQTYN 416
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+ +C ++G ++A ++ +M + G +V++++ +I Y K NL+ +RL + MK
Sbjct: 417 EIIKCFC-LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D Y +I ++G ++ A SL M E G++PN VTY ++I K+D+
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
A F +M++ G P+ +TY+ + + I E G M K G P TY
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG---KMVKQGLLPNVITYTS 592
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
I R + G FK+++E+ + P+ +Y++LI+ L G+ E+A Y + +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 411 LLPEPKTD 418
EP D
Sbjct: 653 YGCEPNVD 660
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 183/441 (41%), Gaps = 46/441 (10%)
Query: 12 SHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHT 70
S + E+ K+++ G + + + ++S + D + L+ + G +T Y+
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I L +F+TA+ + M + PS QT +I+ +C + D+ +A+ F
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPS---TQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNIILNGWCNIIGSS 189
+ + + + L+ C+ N+ +A L+ K + + ++ +++G+ G
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG-GKL 498
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A ++ M + GI + V+++ II Y + L LF +M G + YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I +K + +A + M ++G+ PNV+TY S I LC+ + A + F EM +R
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 310 SPTIRTYHAFL-DIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFS-------- 356
P + TY + + + + G E++ LL + GC+P DTY L+K
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 357 -------------------RWRQFG--------NVFKVWNEISENGNGPDRSSYTALIHA 389
R G + ++ + G S Y ALI A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 390 LFLNGKLEEAHQYYMEMKEKQ 410
L +EEA + M EK
Sbjct: 739 LCKENFIEEAQCIFQTMLEKH 759
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 47/312 (15%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
W +SG S++ Y+ MI+ K A +M P+++T + I
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF---ID 595
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLM--FCNKDV 167
C G A F+ ++ + + + L+ LC+ +DAE +L+ +
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P N ++ ++ G C G CY+
Sbjct: 656 EP-NVDTYTTLVKGLCG-----------------EGRCYEAD------------------ 679
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+L M++ G++ ++Y A++ K V+ A+++ SM+ G ++ Y +LI
Sbjct: 680 -QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE--VFGLLESMRKMGCQPT 344
LCK ++EA+ F ML++ + + LD +++ GE LL M C
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLN 798
Query: 345 NDTYIMLIKKFS 356
TY+ML ++ S
Sbjct: 799 FQTYVMLARELS 810
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 17/282 (6%)
Query: 144 LLSALCRYKNVQDAEHLM--------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
LL LC Q+A L+ C DV +NT ++NG+ G +A
Sbjct: 161 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT-----VINGFFKE-GDPDKAYAT 214
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM +GI DVV++S II+ KA+ + K + + + M + G+ + + YN+++H
Sbjct: 215 YHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCS 274
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ +AI +K M GV P+VVT N L+ LCK R+ EAR+ F+ M + G+ P I T
Sbjct: 275 SGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITT 334
Query: 316 YHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L T E+ LL+ M G QP + + +LI +++ + V++++
Sbjct: 335 YCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMR 394
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ G P+ +Y +I L G++ +A +M + L P+
Sbjct: 395 QQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPD 436
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K F +F +L G C +S + V M+Q G +V S + ++
Sbjct: 112 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRS 171
Query: 225 HKVLRLFDQMKRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L L M G +C D +YN VI+ K A + M ++G+ P+VVTY+
Sbjct: 172 QEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYS 231
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKM 339
S+I LCKA+ +D+A + + M++ G+ P RTY++ + +G+ E G L+ M
Sbjct: 232 SIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSD 291
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P T +L+ + R+ K++N +++ G PD ++Y L+ G L E
Sbjct: 292 GVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEM 351
Query: 400 HQ 401
H
Sbjct: 352 HD 353
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 7/255 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I K D A+A EM P +VT ++ I C + +A+
Sbjct: 195 YNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSI---IAALCKAQAMDKAMEVLN 251
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ + ++ C + +A M C+ V P + + N++++ C
Sbjct: 252 TMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEP-DVVTCNLLMDYLCKN 310
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA +++ M++ G+ D+ ++ ++ Y+ L ++ L D M GI+ + V
Sbjct: 311 -RRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHV 369
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N +I A AK V +A+ + M ++G++PN V Y ++I LCK ++ +A +M+
Sbjct: 370 FNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMI 429
Query: 306 QRGISPTIRTYHAFL 320
G++P I Y +
Sbjct: 430 NEGLTPDIIVYTPLI 444
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 6/224 (2%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
++ ++S +I C +A L + + G + + ++ L + DA+ ++
Sbjct: 83 NLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 142
Query: 267 KS-MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-I 322
M + G PNV + L+K LC + EA + M G P + Y+ ++
Sbjct: 143 LCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGF 202
Query: 323 IRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G+ + + M G P TY +I + + +V N + +NG P+
Sbjct: 203 FKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNC 262
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+Y +++H +G+L EA + M + P+ T LL D+
Sbjct: 263 RTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDY 306
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 262 AISLMKSMEEKG---VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A+S M G V PN+ TY+ LI C+A +LD A ++++G T+
Sbjct: 65 AVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTP 124
Query: 319 FLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L + RT + + +L M ++GC P + +L+K + ++ + ++
Sbjct: 125 LLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDD 184
Query: 375 GNG--PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD Y +I+ F G ++A+ Y EM ++ +LP+ T
Sbjct: 185 GGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVT 229
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 13/237 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++IA L K + D A +++ M P+ T ++ + YC+ + AI
Sbjct: 230 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSI---VHGYCSSGQLTEAI---- 282
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGW 182
+ + + G+E L+ LC+ + +A + K + ++ +L G+
Sbjct: 283 GFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGY 342
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G+ E + M GI + F+ +I Y+K + + + +F +M++ G+ +
Sbjct: 343 ATK-GALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPN 401
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
Y VI L K V DA+ +K M +G+ P+++ Y LI C K ++A +
Sbjct: 402 AVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEE 458
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 19/354 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + S Y ++ K + A L+DEMR P +VT +LI C+ DV
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYN---VLINAMCSQGDV 246
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFN 176
G A+ + + + +L +LC + ++A+ L MF N D P + +FN
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN-DCAP-DEVTFN 304
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-- 234
++ C G A +V +MS+ G D++++S I+ K R + + ++L ++
Sbjct: 305 AVITSLCQK-GFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363
Query: 235 KRMGIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP-LCKA 291
+ + C D+ +N +I +L + L AI ++ M E G P++ TYN ++ LCK+
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTY 348
K +EA + M+ G+ P TY + + +E+ G+ ++ MG P Y
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLY 483
Query: 349 -IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+L+ +WR + + NG PD S+Y L+ + G LEEA +
Sbjct: 484 NAILLGLCKKWRT-DLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKE 536
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 162/354 (45%), Gaps = 22/354 (6%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ D A L+ + G P+++ ILI++ CA GR +A + + I
Sbjct: 76 ELDGALRLVHSISGSGKDPAVIPCN---ILIKKLCAD---GRVADAERVVEALGPSATII 129
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKSFNIILNGWCNIIGSSREAERVWM 197
+ +++ CR N+ A ++ D PF +T ++N ++ C + G +A V+
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMI----DSVPFAPDTFTYNPLIRALC-VRGCVLDALAVFD 184
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M RG VV++S ++ K + + L D+M+ G E D YN +I+A+
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A+ ++ S+ G P+ VTY ++K LC + + +EA + +M +P T++
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFN 304
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE---- 370
A + + + G +L M + GC P TY ++ + R+ K+ E
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364
Query: 371 -ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+S+N PD+ ++ +I +L G + A + EM E +P+ T + D
Sbjct: 365 MVSKNCI-PDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVD 417
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++ C G +AERV + G +++++ +++ Y +A N+ R+ D +
Sbjct: 100 NILIKKLC-ADGRVADAERV---VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP 155
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
D YN +I AL V DA+++ M +G +P+VVTY+ L+ CK
Sbjct: 156 ---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYK 212
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
+A DEM +G P I TY+ ++ + G+ E +L S+ GC+P TY ++
Sbjct: 213 QAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVL 272
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K ++ K+ ++ N PD ++ A+I +L G + A + +M E
Sbjct: 273 KSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCT 332
Query: 413 PEPKTDELLQDWSYNKQFVERQIASLK 439
P+ T + D ++ V+ I LK
Sbjct: 333 PDIITYSSIMDGLCKERRVDEAIKLLK 359
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +++ + + A ++ S+ AP+ TYN LI+ LC + +A FD+ML
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDML 187
Query: 306 QRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
RG SP++ TY LD +G ++ LL+ MR GC+P TY +LI G
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVG 247
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
KV N + G PD +YT ++ +L + + EEA + +M P+ T +
Sbjct: 248 EALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307
Query: 423 DWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQD 459
K FV R L A + G +I+ S D
Sbjct: 308 TSLCQKGFVGRATKVL-AQMSEHGCTPDIITYSSIMD 343
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 19/330 (5%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
EMR+K E I + L++ + S + D A L + G Y ++ L
Sbjct: 220 EMRSKGCEPDIVTYNVLINAMCS--QGDVGEALKV-LNSLPSYGCKPDAVTYTPVLKSLC 276
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+++ A L+ +M + P VT + I C VGRA
Sbjct: 277 SSERWEEADKLLTKMFSNDCAPDEVTFNAV---ITSLCQKGFVGRATKVLAQMSEHGCTP 333
Query: 137 GIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
I + ++ LC+ + V +A L+ +K+ P + +FN I+ C G
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP-DQVTFNTIITSLCQK-GLFD 391
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCY-SKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A +V EMS+ G D+ +++CI+ + K+ + L L + M G+ D Y ++
Sbjct: 392 RAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
L++ ++ AI + + ++ G++P+ + YN+++ LCK + D A F M+ G
Sbjct: 452 AFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGC 511
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
P TY I+ G G LE +++
Sbjct: 512 MPDESTYI----ILVEGIAYEGFLEEAKEL 537
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 152/315 (48%), Gaps = 8/315 (2%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
T ILI +C + + AF + + V + LL LC K V +A ++
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151
Query: 165 KDVF--PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
F P + ++N ++NG+ G +A +++EM +GI +VV+++ +I KA+
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFRE-GQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ + +F QM G++ D YN +IH L+ G+ K+ + +++ M G+ P+ +TY
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKW-KEVVQMLEEMSTHGLEPDCITY 269
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRK 338
L+ LCK + EAR FD M ++GI P + Y L T E+ L+ M
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G P + ++ +++ ++N++ + G PD S+ ALI AL G++++
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 399 AHQYYMEMKEKQLLP 413
A + +M + + P
Sbjct: 390 AVLQFNQMINEGVTP 404
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 14/345 (4%)
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
+ +D M G P+ ++ I+ Y + A++ F ++ + + F L+
Sbjct: 322 SFLDLMVGNGVSPN---RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378
Query: 146 SALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
ALC+ V DA + N+ V P N F+ ++ G C + G +AE ++ E+ +G
Sbjct: 379 DALCKLGRVDDAVLQFNQMINEGVTP-NIFVFSSLVYGLCTV-GKWEKAEELFFEVLDQG 436
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI--HALAKGRLVKD 261
IC D V F+ ++ + + RL D M R+G+ + YN ++ H L GR + +
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLT-GR-IDE 494
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A L+ M G+ PN TY L++ CKAR++D+A F EML +G++P + TY+ L
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554
Query: 321 DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ +TG E L +M + TY +++ + FK++ +
Sbjct: 555 GLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
D ++ +I AL G+ E+A + + L+P+ T L+ +
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 7/341 (2%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR---FKFAVG 137
D A L DE+ S+ LL ++ R R ++ F R K A
Sbjct: 30 LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89
Query: 138 IEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ L+ CR ++ K + N + +L G C+ + +
Sbjct: 90 ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
+ MS+ G DVV+++ +I+ + + + K LF +M GI + Y VI L K
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++V A + + M ++GV P+ TYN LI K E Q +EM G+ P TY
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 317 HAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
LD + + G E +SM + G +P Y +L+ ++ + + +
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
NG P+R + + A +EEA + +M+++ L P+
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 132/282 (46%), Gaps = 39/282 (13%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++L+ C G REA + M ++GI DV ++ ++ Y+ L ++ D
Sbjct: 268 TYALLLDYLCKN-GRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+ +R+++N + A AK ++++A+ + M ++G++P+VV++ +LI LCK +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 294 LDEARQAFDEMLQRGISPTIRTYHA-----------------FLDIIRTG---EEVF--- 330
+D+A F++M+ G++P I + + F +++ G + VF
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 331 ---------------GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L++ M ++G +P +Y L+ + K+ + + NG
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P+ +YT L+ ++++A+ + EM K + P T
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVAT 548
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 10/244 (4%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV----- 245
EA +++ E+ V +F+ +++ S+A R+ RM EC KV
Sbjct: 32 EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91
Query: 246 -YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD-E 303
Y+ +I + ++ + + + G NV+ + L+K LC A+++DEA
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M + G P + Y+ ++ R G E+ + L M G P TY +I + +
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
V+ ++ + G PD +Y LIH GK +E Q EM L P+ T L
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 421 LQDW 424
L D+
Sbjct: 272 LLDY 275
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 130/322 (40%), Gaps = 19/322 (5%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WE A F Q G ++T++ L + A LID M P++++
Sbjct: 422 WEKAEELFFEVLDQ-GICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
TL + +C + A + LL C+ + V DA L
Sbjct: 481 TL---VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
K V P ++N IL+G G EA +++ M D+ +++ I++ K
Sbjct: 538 LMKGVTPV-VATYNTILHGLFQT-GRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNN 595
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + ++F ++ + D +N +I AL KG +DA+ L ++ G+ P+VVTY
Sbjct: 596 FVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYR 655
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGEEVFGLLES 335
+ + L + L E F M + G +P +A + DI R G ++ L E
Sbjct: 656 LIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715
Query: 336 MRKMGCQPTNDTYIMLIKKFSR 357
+ T+ MLI +SR
Sbjct: 716 NFSLEASTTS----MLISLYSR 733
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 15/266 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++A + D A L+D M P+ + T IL+R YC V A + F
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN---EFTYTILLRGYCKARRVDDAYSLFR 535
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWC 183
+ + +L L + +A L ++ TK ++NIILNG C
Sbjct: 536 EMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL---NMINSRTKCDIYTYNIILNGLC 592
Query: 184 --NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
N + EA +++ + + D V+F+ +I K + LF + G+
Sbjct: 593 KNNFVD---EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y + L + + + L +ME+ G APN N+L++ L + A
Sbjct: 650 DVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYL 709
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTGE 327
++ ++ S T + + GE
Sbjct: 710 YKLDEKNFSLEASTTSMLISLYSRGE 735
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 176/417 (42%), Gaps = 49/417 (11%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
F WA +Q + H+ Y+ + L K A + D+M E P++ T I++R
Sbjct: 24 FKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYG---IVLR 80
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
C A+ + L+S LC+ V A L D +
Sbjct: 81 GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLD 140
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
S+N++ G C R A V+ EM + + +++++ ++ Y +A + + + L
Sbjct: 141 RISYNMLTYGLCKADQIDR-ALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 232 DQM----KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
++M K + D YN VI K R + A +++ M + G +PNVVT+N+L+
Sbjct: 200 EEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDG 259
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTY------HA-----------FLDIIRTG---- 326
LC KLDEA F+ M++R PT TY HA F+D++R G
Sbjct: 260 LCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPN 319
Query: 327 -----------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
E+ +L+ M G +P TY +I + Q K++N
Sbjct: 320 VYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN 379
Query: 370 EISENGNG---PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ + PD +Y+ +++ L K EA++Y++ M E +L+ +P + + D
Sbjct: 380 DAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMAD 436
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YNA ++AL KG A + M K PN+ TY +++ LC K D A + +M
Sbjct: 39 TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG--CQPTNDTYIMLIKKFSRWRQFG 362
+ ++PT + + + +V E +++ C +Y ML + Q
Sbjct: 99 ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQID 158
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
V+ E+ EN P +Y L++ G++E+A EM E + K +++
Sbjct: 159 RALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGK-----KGSDVVP 213
Query: 423 D-WSYN 427
D +SYN
Sbjct: 214 DMYSYN 219
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 249 VIHALAKGRLVKDAISLMK-SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
VIH L + K A + K + ++ V TYN+ + L K +AR+ FD+ML +
Sbjct: 7 VIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66
Query: 308 GISPTIRTYHAFL----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P I TY L D +T + LL+ M PT ML+ + +
Sbjct: 67 ECLPNIYTYGIVLRGLCDDAKT-DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++++ +S+ + DR SY L + L +++ A + EM+E ++P
Sbjct: 126 AYELYKRLSDECS-LDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVP 174
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 192/424 (45%), Gaps = 26/424 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG 76
E+++ + E +S V + L +R +A FF W + G+ H+ + Y MI ILG
Sbjct: 81 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKA-LHFFRWV-EAKGFTHNEQSYFLMIEILG 138
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
+ R + A + + G + + LIR Y +I F K +
Sbjct: 139 RSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSP 198
Query: 137 GIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ F LLS + + A+ L M V P +T +FNI++ G+C +S E
Sbjct: 199 SVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTP-DTYTFNILIRGFCM---NSMVDE 254
Query: 194 RVWM--EMSQRGICYDVVSFSCIISCYSKARNL---HKVLRLFDQMKRMGIECDRKVYNA 248
W EMS+ DVV+++ ++ +A + H V++ + K + + Y
Sbjct: 255 GFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVK-KSPNLSPNVVTYTT 313
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML-QR 307
+I + + +A+SL+ M +G+ PN +TYN+LI+ LC+A+KLD+ ++ + M+
Sbjct: 314 LIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 373
Query: 308 GISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G P T + + T EE F + E M ++ QP + TY +L++ + F
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 365 FKVWNEISEN-------GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++E++E G P ++Y + L NGK ++A + + ++ ++ P
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSY 493
Query: 418 DELL 421
L+
Sbjct: 494 KTLI 497
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 72/396 (18%), Positives = 140/396 (35%), Gaps = 56/396 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+T++ L + K A ++ M + P++VT TL IR YC D+ A++
Sbjct: 274 YNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTL---IRGYCMKQDMAEALSL 330
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC 183
+ L+ LC + + + ++ F +T + N ++ C
Sbjct: 331 LAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHC 390
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR------- 236
+ G EA V+ +MS+ + D ++S ++ + + + FD++
Sbjct: 391 TM-GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHD 449
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV---------------------- 274
+G + YN + L K A + + + ++G
Sbjct: 450 VGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAG 509
Query: 275 ------------APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
P+ TY +I L K A ++ ++ML+ PT +H+ L
Sbjct: 510 FDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAA 569
Query: 323 I-------RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + V +LE + + T L+ + R+ K+ E
Sbjct: 570 LVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKR 629
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
D + +I L K+ EA Y E+ EK +
Sbjct: 630 QSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 665
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 162/366 (44%), Gaps = 19/366 (5%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R Y T++ L + +++ A L E+R P+LVT +L + R +GR+
Sbjct: 175 RAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGR------MGRSWPR 228
Query: 126 FYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
A A G+E +++A CR V +A +D+ + N
Sbjct: 229 IVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFF---EDLKARGHAPCVVTYNA 285
Query: 182 WCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G + EA RV EM Q G D V+++ + Y++A + R D M G
Sbjct: 286 LLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG 345
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YN V+ A V +A++L M++ G PNV TYN ++ L K +
Sbjct: 346 LLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVML 405
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII-RTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ EM + G +P T++ L + + G E V +LE MR G + + DTY LI +
Sbjct: 406 EMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAY 465
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R N FK++NE++ G P ++Y AL++ L G A +M+ K P
Sbjct: 466 GRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNE 525
Query: 416 KTDELL 421
++ LL
Sbjct: 526 QSYSLL 531
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISL 265
DV +++ ++ S+A + L LF +++R G+ YN V+ + GR ++L
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-R 324
+ M GV P+ T +++I C+ +DEA F+++ RG +P + TY+A L + +
Sbjct: 233 LDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGK 292
Query: 325 TGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E +L M + GCQP TY L ++R F + + ++ G P+ +
Sbjct: 293 AGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFT 352
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
Y ++ A GK++EA + +MK+ +P T L+
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLV 391
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 151/376 (40%), Gaps = 17/376 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+A Y+ ++ + GK + A ++ EM P VT L R
Sbjct: 272 KARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFF 331
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSF 175
+ R ++ + A + +++A V +A L K F N ++
Sbjct: 332 EEAARCLDTMASKGLLPNAF---TYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTY 388
Query: 176 NIILNGWCNIIGS-SREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
N++L ++G SR + M EMS+ G + V+++ +++ K V R+ +
Sbjct: 389 NLVLG----MLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 444
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M+ G+E R YN +I A + +A + M G P + TYN+L+ L +
Sbjct: 445 GMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQG 504
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM-GCQPTNDTYIML 351
A+ +M +G P ++Y L G V G+ ++ G ++++L
Sbjct: 505 DWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVIL 564
Query: 352 ----IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
I F + R+ + + E+ G PD + +++ NG +A + + +K
Sbjct: 565 RTLVIANF-KCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIK 623
Query: 408 EKQLLPEPKTDELLQD 423
L P+ T L D
Sbjct: 624 RSGLSPDLITYNSLMD 639
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 165/397 (41%), Gaps = 47/397 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI------ 110
K++G+ + Y+ ++ +LGK +F ++ EM P+ VT T+L +
Sbjct: 377 KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 436
Query: 111 ---------RRYCAVH--------------DVGRAINAFYAYKRFK---FAVGIEDFQGL 144
R C V G NAF Y F I + L
Sbjct: 437 DYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNAL 496
Query: 145 LSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWC---NIIGSSREAERVWMEMS 200
L+ L R + A+ ++ F N +S++++L + N+ G + V+
Sbjct: 497 LNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY---- 552
Query: 201 QRGICYD--VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
G + V+ + +I+ + K R L + F ++K G D ++N+++ AK +
Sbjct: 553 GSGAVFPSWVILRTLVIANF-KCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGM 611
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM-LQRGISPTIRTYH 317
A + S++ G++P+++TYNSL+ K + EA + +++ + + P + +Y+
Sbjct: 612 YSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYN 671
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
++ + G +E +L M G P TY L+ +S F +V + ++
Sbjct: 672 TVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQH 731
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
G P +Y ++ + + EEA + E+ E L
Sbjct: 732 GLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDL 768
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 137/377 (36%), Gaps = 96/377 (25%)
Query: 25 CGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
CG + + V+ VL +R+ G S Y+T+IA G+ A
Sbjct: 430 CGKRGMEDYVTRVLEGMRS---------------CGVELSRDTYNTLIAAYGRCGSRTNA 474
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
+ + +EM P + T LL ++ R D A + + F + + L
Sbjct: 475 FKMYNEMTSAGFTPCITTYNALLNVLSRQ---GDWSTAQSIVSKMRTKGFKPNEQSYSLL 531
Query: 145 LSALCRYKNVQDA---EHLMFCNKDVFP-FNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L + NV E+ ++ + VFP + +I N C + E + E+
Sbjct: 532 LQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDG---METAFQEVK 588
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA------------ 248
RG D+V F+ ++S Y+K K +FD +KR G+ D YN+
Sbjct: 589 ARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESW 648
Query: 249 ------------------------VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
VI+ K LVK+A ++ M G+AP VTY++L
Sbjct: 649 EAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTL 708
Query: 285 I------------------------KPL-----------CKARKLDEARQAFDEMLQRGI 309
+ KP+ C+A++ +EAR E+ + +
Sbjct: 709 VGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDL 768
Query: 310 SPTIRTYHAFLDIIRTG 326
+ A+++ + G
Sbjct: 769 DFDKKALEAYIEDAQFG 785
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 157/385 (40%), Gaps = 53/385 (13%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPS 99
+ D A F A +Q G+ HS YHT+I LG+ R+F T LI +MR G P
Sbjct: 110 QTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPG 169
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
L +I Y V AI AF+ F + + F LL L +K ++ A
Sbjct: 170 LFVD-----IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALS 224
Query: 160 LMFCNKDVFPF----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L K + F NT+++NI++ C+
Sbjct: 225 LF---KKLHEFGISPNTRTYNILIRAHCH------------------------------- 250
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ L LF++M + G D + Y+ ++ L + VK A+ ++ M KG
Sbjct: 251 -----SDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYV 305
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGL 332
P+ +TYN+L+ LC+ L EA + +M G +P + Y+ + R G + +
Sbjct: 306 PDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQI 365
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
L M + GC P +Y L+ +F E+ NG P S Y LI L
Sbjct: 366 LRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCN 425
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT 417
GK+ EA + + M ++ L P T
Sbjct: 426 EGKVGEACEVLVMMTKQTLAPHEST 450
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 5/298 (1%)
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
A ++ F + L+ L R + + E L+ KD P+ F I+ + +
Sbjct: 123 ASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIY-GEV 181
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EA + + +M + G F+ ++ + + L L LF ++ GI + + Y
Sbjct: 182 GMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTY 241
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I A + A L M ++G P+V TY+ L++ LC+ ++ A DEML
Sbjct: 242 NILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLN 301
Query: 307 RGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+G P TY+ L+ + E + LL M+ MGC P Y +I F R + +
Sbjct: 302 KGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALD 361
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ ++ ENG P+ SY L++ L GK +EA + EM +P LL
Sbjct: 362 ACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLL 419
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 16/251 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + +TR Y+ +I K A+ L ++M P + +T IL++ C V
Sbjct: 233 GISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDV---ETYSILMQGLCRKSQV 289
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTK 173
A+ + + LL++LCR N+++A L M CN DV +NT
Sbjct: 290 KTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNT- 348
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ G+C G + +A ++ +M + G + +S+ +++ + ++
Sbjct: 349 ----VITGFCRE-GRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEE 403
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G +Y+ +I L V +A ++ M ++ +AP+ T++ L+ +C+ +
Sbjct: 404 MISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQ 463
Query: 294 LDEARQAFDEM 304
EAR+ D++
Sbjct: 464 -TEARELVDKL 473
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 168/380 (44%), Gaps = 55/380 (14%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V I
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S++I+L C+ G S +A+
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYSILLKSLCDQ-GKSGQADD 203
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C DVV++S +I + K +++K LF +M + GI D Y++V+HA
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI--------------------------- 285
L K R + A + ++ M KGV PN TYN+LI
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 286 --------KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLE 334
LCK K+ EAR FD M +G +P + +Y L+ T ++ L +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P T+ +LIK ++ ++NE+ ++G PD +Y +I AL G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
K+++A + + +M ++ + P+
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 158/396 (39%), Gaps = 80/396 (20%)
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
G P +V T+ I + DV +A + F + + ++ ALC+ +
Sbjct: 212 GAVCSPDVVAYSTV---IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 153 NVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+ AE + NK V P N ++N ++ G+ + G +EA RV+ EM + I DVV+
Sbjct: 269 AMDKAEAFLRQMVNKGVLP-NNWTYNNLIYGYSST-GQWKEAVRVFKEMRRHSILPDVVT 326
Query: 211 FSCIISCYSK------ARNLHKVLR-----------------------------LFDQMK 235
S ++ K AR++ + LFD M
Sbjct: 327 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLML 386
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
GI D +N +I A A ++ A+ + M + GV P+VVTY ++I LC+ K+D
Sbjct: 387 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446
Query: 296 EARQAFDEMLQRGISPTIRTYHAF--------------------------LDIIRTGEEV 329
+A + F++M+ +G++P YH LDI+ +
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506
Query: 330 FGLLESMRKM------------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
L + R M G PT Y ML+ + + +V++ + G
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ Y L++ G+++E + EM +K + P
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 164/390 (42%), Gaps = 12/390 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+IA L ++ K D A ++M P K LI+ +C
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYHCLIQGFCTH 477
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ +A + I F +++ LC+ V DA+++ + N + P
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-TAVV 536
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++++++G+C ++G +A RV+ M GI + V + +++ Y K + + L LF +M
Sbjct: 537 YSMLMDGYC-LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 235 KRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ GI+ +YN +I L GR V + M E G+A N TYN +++ L K R
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYNIVLRGLFKNRC 654
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
DEA F E+ + I T + + + R EE L S+ + G P TY +
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSI 714
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + +++ + G PD ++ L ++ A Y ++ E+
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKA 440
E T LL D +K I L A
Sbjct: 775 FSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P + T +LI+ Y + +A+ F + + ++ +++
Sbjct: 381 LFDLMLGDGIAPDIYTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + +++ ++ G+C GS +A+ + E+ G+
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTH-GSLLKAKELISEIMNNGM 495
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V FS II+ K + +FD +G+ VY+ ++ ++ A+
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PN V Y +L+ CK ++DE F EMLQ+GI P+ Y+ +D +
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G V ++ M + G TY ++++ + R F ++ E+ +
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +I +F ++EEA + + L+P
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ + + N ++ + + +A+ L+
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-IIRT 325
E G P+V +Y+ L+K LC K +A M + G SP + Y +D +
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKE 232
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R ++ G P+ +Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLKAH 441
LI+ G+ +EA + + EM+ +LP+ T +L Y K R + A
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352
Query: 442 QPQSGQNTRVIS 453
+ GQN V S
Sbjct: 353 K---GQNPNVFS 361
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 25/327 (7%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIED-----------FQGLLSALCRYKNVQDA 157
LIRRY + A+ AF+ +R + D + ALC+ + + A
Sbjct: 110 LIRRYARLGRATAALRAFHFLRRHPDRYSVVDGGDCSPAATCLLNMTVGALCKEGHPRPA 169
Query: 158 EHLM-FCNKD--VFPF-NTKSFNIILNGWCNIIGSSREAERV---WMEMSQRGICYDVVS 210
L+ C + P + +++N++L+GW S+R E+V W EM G+ VVS
Sbjct: 170 AKLIQRCRHEEGTLPAPDERTYNMLLDGW----SSARRLEKVEKLWAEMRLAGVRSTVVS 225
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+ +I ++ K L D+M+ GIE + N ++++LA +DA L++
Sbjct: 226 YGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKFP 285
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV- 329
GVAPN+ T+NSL+ CK L A M+ RGI PT +TY+ F V
Sbjct: 286 LYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNYFFVFFAKTCNVE 345
Query: 330 --FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L M G P TY +LIK + V ++ E+ +G D ++ T LI
Sbjct: 346 LGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDLATSTMLI 405
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPE 414
H L + + EEA + +M + L+P+
Sbjct: 406 HLLCRSHQFEEACVEFEDMFRRGLVPQ 432
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A R Y+ ++ R+ + L EMR ++V+ TL I+ C + +
Sbjct: 185 APDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVVSYGTL---IKALCMMQHPDK 241
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
A + + + ++ +L QDA L+ F V P N +FN ++
Sbjct: 242 AASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKFPLYGVAP-NISTFNSLV 300
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+C G A V M RGI +++ ++K N+ + L+++M G
Sbjct: 301 LGYCKY-GDLAGASSVLKAMIGRGILPTAKTYNYFFVFFAKTCNVELGMNLYNKMVNNGY 359
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
D+ YN +I L + ++ + ++K M+ G ++ T LI LC++ + +EA
Sbjct: 360 APDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDLATSTMLIHLLCRSHQFEEACV 419
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
F++M +RG+ P TY + I+ GL+E + K+
Sbjct: 420 EFEDMFRRGLVPQYITYRMLMKEIKR----LGLVELVEKL 455
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 53 LWAG-KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
LWA + +G + Y T+I L ++ D A +L+DEMR +L+T ++
Sbjct: 210 LWAEMRLAGVRSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVY--- 266
Query: 112 RYCAVHDVGRAINAFYAYKRFKF---AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
++ GR +A+ ++F A I F L+ C+Y ++ A ++ +
Sbjct: 267 ---SLALAGRFQDAYKLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRG 323
Query: 167 VFPFNTKSFN---IILNGWCNI-IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ P K++N + CN+ +G + ++ +M G D ++++ +I +A
Sbjct: 324 ILP-TAKTYNYFFVFFAKTCNVELGMN-----LYNKMVNNGYAPDQITYNLLIKMLCEAN 377
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L V+++ +MK G E D +IH L + ++A + M +G+ P +TY
Sbjct: 378 RLELVVQMIKEMKTSGFESDLATSTMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYITYR 437
Query: 283 SLIK 286
L+K
Sbjct: 438 MLMK 441
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 179/388 (46%), Gaps = 20/388 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG S Y+ +I + F A+ L++EM P+L T TL+ + ++ V
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF----CNKDVFPFNTK 173
V F + KF I F LL CR + +A L+F C +D+ P
Sbjct: 338 GVRLR---FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA-FLLFDELKC-RDLVP-TVI 391
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G C + G A R+ EM+ +G+ D+ +++ +++ K + F++
Sbjct: 392 TYNTLIHGLC-MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G++ DR YN I K A S+ + M G P+V+TYN + LC+
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
+EA + M+ G+ P TY + ++ +R EVF M G P+ T
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN---EMLSKGVAPSVVT 567
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + F ++++ E + +Y A+I+ L + +++EA++Y+ EM+
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQI 435
EK +LP + +L + S N + E +
Sbjct: 628 EKGILPNKFSYTILINESCNMGYWEEAL 655
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 161/381 (42%), Gaps = 10/381 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y+TM+ K + D A L+ EM+ P+ VT +L+
Sbjct: 207 EQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYN---VLVNGLSKK 263
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ +A V + L++ C+ +A L+ N+ FP +
Sbjct: 264 GELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP-TLST 322
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C + + R + +M + D+VSF+ ++ Y + + + LFD++
Sbjct: 323 YNTLMYGLCKWVQVTGVRLR-FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K + YN +IH L + A+ L K M ++G+ P++ TY L+ K +
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYV 441
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
AR F+EML +G+ P Y+ + I F + E M G P TY +
Sbjct: 442 SMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + F + + +G PD +YT++I+ NG L +A + + EM K +
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 412 LPEPKTDELLQDWSYNKQFVE 432
P T +L KQ ++
Sbjct: 562 APSVVTYTVLIHAHAAKQMLD 582
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + ++N+ ++ C G+ EA + M G+ D V+++ II+ + K +L K
Sbjct: 491 FPPDVITYNVFVHALCQQ-GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKA 549
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F++M G+ Y +IHA A +++ A M EK V NV+TYN++I
Sbjct: 550 REVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIING 609
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
LC R++DEA + FDEM ++GI P +Y ++ G EE L M QP
Sbjct: 610 LCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669
Query: 345 NDTYIMLIKKFSRWRQ 360
+ T+ + +K R Q
Sbjct: 670 SFTHSVFLKNLHRDYQ 685
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ +M + G+ DV + + I+ L K ++ M++ GI+ YN ++ +
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K V A+ L+ M+E+G PN VTYN L+ L K +L++A+ +EML G++ +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ ++ + G E F L+E M PT TY L+ +W Q V ++++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ PD S+ +L++ G + EA + E+K + L+P
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 47/285 (16%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A+ V+ M Q GI VV+++ ++ Y K + + L L +M+ G + YN ++
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L+K ++ A L++ M G+ + TYN LI C+ EA +EM+ R
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
Query: 311 PTIRTYHAFL--------------------------DII----------RTG--EEVFGL 332
PT+ TY+ + DI+ RTG E F L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+ ++ PT TY LI W ++ E+++ G PD +YT L++ F
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV-ERQIA 436
G + A ++ EM K L P+ ++YN + V E +IA
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPD--------RFAYNTRIVGEMKIA 474
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +FD+M R G+ D K N ++ L L+ A ++ ME+ G+ P VVTYN+++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
CK ++D+A + EM +RG P TY+ ++ + + G E+ GL+E M G +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY LI F + F F + E+ P S+Y L++ L
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I K KF A L DEM PS +T ++ I +C + + A + FY
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM---IDGFCKQNRLDAAEHMFY 350
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ I F L++ CR K V D L+ + NT ++ +++G+C +
Sbjct: 351 LMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV- 409
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A+ + EM G+C +VV+ + ++ L L +F M++
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TYNS+I LCK +LD
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T+ ++ + G ++ L M + G TYI LI
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + ++ L+ +L+ A
Sbjct: 590 HGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 150/357 (42%), Gaps = 28/357 (7%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK---RFKFAVGI-- 138
A AL+D M P+ +T T+ + C + D A+N + K V I
Sbjct: 198 AVALLDRMLEDGLQPNQITYGTI---VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWP 254
Query: 139 -EDFQGLLSALC---RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
E +++ C R+ Q M K + P + ++N ++N + G EAE
Sbjct: 255 LERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP-DVVTYNALINAFVKE-GKFFEAEE 312
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ EM RGI +++S +I + K L +F M G D +N +I
Sbjct: 313 LYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYC 372
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+ + V D I L+ M E G+ N +TY +LI C+ L+ A+ EM+ G+ P +
Sbjct: 373 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVV 432
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKM--------------GCQPTNDTYIMLIKKFSRWRQ 360
T + LD + ++ LE + M G +P TY +LI +
Sbjct: 433 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
F +++ E+ G PD +Y ++IH L +L+EA Q + M K P T
Sbjct: 493 FLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVT 549
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 151/354 (42%), Gaps = 32/354 (9%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
IL++ +C+ + A++ F + F + F LL LC + +A L C
Sbjct: 118 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKP 177
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+V F T ++NG C G EA + M + G+ + +++ I+ K +
Sbjct: 178 NVVTFTT-----LMNGLCRE-GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHAL-----------AKGRLVKDAISLMKSMEEKGV 274
L L +M+ E N VI L + GR + L + +E K +
Sbjct: 232 SALNLLRKME----EVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEE 328
+P+VVTYN+LI K K EA + +DEML RGI P+ TY + +D + E
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
+F L M GC P T+ LI + R ++ + K+ +E++E G + +YT LIH
Sbjct: 348 MFYL---MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
G L A EM + P T L D + ++ + KA Q
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 18/293 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G ST Y +MI K + D A + M P ++T TL I YC V
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL---IAGYCRAKRV 377
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
I + + L+ C+ ++ A+ L+ + V P N + N
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCP-NVVTCNT 436
Query: 178 ILNGWCNIIGSSREAERVWMEMSQ-----------RGICYDVVSFSCIISCYSKARNLHK 226
+L+G C+ G ++A ++ M + G+ DV +++ +IS +
Sbjct: 437 LLDGLCDN-GKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L+++M GI D YN+VIH L K + +A + SM K +PNVVT+ +LI
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
CKA ++D+ + F EM +RGI TY + R + G L+ ++M
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M R + + SF+ ++ C+ L L F ++ ++G ++ ++H L
Sbjct: 103 KMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVED 162
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+ +A+ L M PNVVT+ +L+ LC+ ++ EA D ML+ G+ P TY
Sbjct: 163 RISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 218
Query: 318 AFLD-IIRTGEEV--FGLLESMRKMGCQPTN------DTYIMLIKKFSRWRQFGNVFKVW 368
+D + + G+ V LL M ++ N + +I F ++ ++
Sbjct: 219 TIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLL 278
Query: 369 NEISENGN-GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
E+ E PD +Y ALI+A GK EA + Y EM + ++P T
Sbjct: 279 QEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 22/262 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G +T Y T+I +V + A L+ EM P++VT TLL C
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL---DGLCDNG 445
Query: 118 DVGRAINAFYAYKRFKFAV-------GIE-DFQG---LLSALCRYKNVQDAEHLM--FCN 164
+ A+ F A ++ K + G+E D Q L+S L +AE L +
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 505
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ + P +T ++N +++G C SR EA +++ M + +VV+F+ +I+ Y KA
Sbjct: 506 RGIVP-DTITYNSVIHGLCK---QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 561
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L LF +M R GI + Y +IH K + A+ + + M GV P+ +T
Sbjct: 562 RVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIR 621
Query: 283 SLIKPLCKARKLDEARQAFDEM 304
+++ L +L A +++
Sbjct: 622 NMLTGLWSKEELKRAVAMLEDL 643
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 20/370 (5%)
Query: 64 STREYHTMIAIL---GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
S+ Y+ +I L G VRK A AL EM P++VT + I
Sbjct: 307 SSFTYNPLITALLERGFVRK---AEALQMEMENEGIMPTVVTYNAI---IHGLLKCEQAE 360
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIIL 179
A F + + + LL+ C+ N+++A L+ + ++N ++
Sbjct: 361 AAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 420
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C + G EA R+ EM ++G DV +++ +++ K RNL FD+M G+
Sbjct: 421 DGYCRL-GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGL 479
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ D YN I A A L + M KG+ P+ VTYN +I LCK L +A++
Sbjct: 480 QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKR 539
Query: 300 AFDEMLQRGISPTIRTY------HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
+M+ G+ P TY H ++R E LL M G QP+ TY +L+
Sbjct: 540 LKTKMVSDGLQPDCITYTCLIHAHCERGLLR---EARKLLNGMVSDGLQPSVVTYTILVH 596
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + + + ++ + G P+ +Y LIHAL + G+ A +++ EM E+ L P
Sbjct: 597 TCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAP 656
Query: 414 EPKTDELLQD 423
T LL D
Sbjct: 657 NKYTYTLLID 666
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 22/369 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y+ +I L K + + A EMR P ++T +LL RYC
Sbjct: 335 ENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLL---NRYCKA 391
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ A+ +R A + + L+ CR ++ +A L + FP + +
Sbjct: 392 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFP-DVCT 450
Query: 175 FNIILNGWCNIIGSSREAERVWM------EMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ I++NG SR+ + M EM +G+ D +++ I +
Sbjct: 451 YTILMNG-------SRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAF 503
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+L + M GI D YN +I L K +KDA L M G+ P+ +TY LI
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAH 563
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTN 345
C+ L EAR+ + M+ G+ P++ TY + R G +G M +G +P
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY +LI + F+ ++E+ E G P++ +YT LI G +A + Y E
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE 683
Query: 406 MKEKQLLPE 414
M + + P+
Sbjct: 684 MHQNGIPPD 692
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 170/408 (41%), Gaps = 56/408 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A R+ + ++ +L ++D A+ EM P++VT TLL +
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKE------ 250
Query: 120 GRAINAFYAYKRFK-----FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS 174
GR A K + F++ F ++S L R ++++A L+ D + K+
Sbjct: 251 GRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLV----DSMRLSKKA 306
Query: 175 FNIILNGWCNII---GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+ N + G R+AE + MEM GI VV+++ II K F
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK- 290
+M+ MG+ D YN++++ K +K+A+ L+ + G+AP V+TYN+LI C+
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426
Query: 291 -----ARKLDE-----------------------------ARQAFDEMLQRGISPTIRTY 316
AR+L E AR+ FDEML +G+ P Y
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486
Query: 317 HAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ + + + F L E M G P TY ++I + + ++ ++
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+G PD +YT LIHA G L EA + M L P T +L
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTIL 594
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 44/245 (17%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K ++P +T ++N+I++G C G+ ++A+R+ +M G+ D ++++C+I + + L
Sbjct: 512 KGIYP-DTVTYNVIIDGLCKT-GNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLL 569
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ +L + M G++ Y ++H + + A + M + G+ PN +TYN L
Sbjct: 570 REARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 629
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPT 344
I LC + A + F EML+RG++ P
Sbjct: 630 IHALCMTGRTPLAFRHFHEMLERGLA--------------------------------PN 657
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY-- 402
TY +LI R + + +++ E+ +NG PD ++ AL +E H Y
Sbjct: 658 KYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG------FDEGHMYHA 711
Query: 403 --YME 405
YME
Sbjct: 712 IEYME 716
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 161/351 (45%), Gaps = 14/351 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I + R + A A +EM G L + +I Y + + A + F
Sbjct: 55 YTSLIHAYAEARDMEGAVACTEEML--SQGIQL-NEAVFCSIISGYASAGNNEAAEHWFE 111
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+K G + ++ A C+ N++ E L+ ++ F N + +LNG+ I
Sbjct: 112 KFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI- 170
Query: 187 GSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
R+ E+ + + G+ ++ CI+ ++KA N+ K L + ++M + G+ ++
Sbjct: 171 ---RDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 227
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+Y ++ A+G A + + M G+ P++V YN L+ CKA ++D+A +
Sbjct: 228 MIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLEN 287
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQ 360
+ + PTI TY + LD G + LE ++ G +P +Y L+ ++ RQ
Sbjct: 288 IEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 347
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
N + NE+ NG P+ SYTAL G +E+A + MK++ L
Sbjct: 348 MENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENL 398
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 40/293 (13%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N + +I++G+ G A +VW +M G+ D+V ++ ++ + KA + K L +
Sbjct: 226 NKMIYAMIMDGYARG-GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGV 284
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ ++ + + Y +++ KG ++ A+ + ++ G+ P VV+YNSL+ L K
Sbjct: 285 LENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 344
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK--------- 338
AR+++ AR +EML G+ P R+Y A + R G E+ FG+ + M+K
Sbjct: 345 ARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVA 404
Query: 339 --------------------------MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
G + TY ++ ++R + + N++
Sbjct: 405 YGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQ 464
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDW 424
++G D YT+ I A F +G EE + M+EK+L +T L+ W
Sbjct: 465 KHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +GI + F IIS Y+ A N F++ K + VYN+++ A +
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
++ +L+ MEE+G N+ Y +++ + R ++ F + G+SPT TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196
Query: 318 AFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + +LE M K G P Y M++ ++R F FKVW ++
Sbjct: 197 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 256
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G PD Y L+HA G++++A ++ +LLP +T
Sbjct: 257 GLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIET 299
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 151 YKNVQDAEHLMFCNKDVFP----FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY 206
Y +D E + C +++ N F I++G+ + G++ AE + + +
Sbjct: 62 YAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASA-GNNEAAEHWFEKFKAENLVP 120
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
+ ++ I+ Y +A N+ V L QM+ G + + +Y V++ A+ R + +S
Sbjct: 121 GGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFF 180
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG 326
++ G++P TY ++K KA + +A +EM + G+SP Y +D G
Sbjct: 181 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 240
Query: 327 EE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+ F + E M G +P Y +L+ F + + V I N P +Y
Sbjct: 241 GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY 300
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
T+++ G +++A + + +K L P
Sbjct: 301 TSILDGYVKGGNIQKALEVFDRIKTAGLRP 330
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 123/280 (43%), Gaps = 16/280 (5%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
F A+ + ++M P +V IL+ +C + +A+ + + IE
Sbjct: 243 FTAAFKVWEDMVSAGLKPDIVIYN---ILVHAFCKAGRMDKALGVLENIEANRLLPTIET 299
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM- 197
+ +L + N+Q A + + P S+N +L+G + +R+ E +
Sbjct: 300 YTSILDGYVKGGNIQKALEVFDRIKTAGLRP-GVVSYNSLLSG----LAKARQMENARLM 354
Query: 198 --EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM G+ + S++ + Y++A ++ K +F +MK+ + D Y A++ A K
Sbjct: 355 LNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCK 414
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
++ A + + + + G+ N +TY +++ + +L +AR ++M + G
Sbjct: 415 SGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTIC 474
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
Y +F+ R+G EEV L MR+ + TY LI
Sbjct: 475 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLI 514
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G Y+++++ L K R+ + A +++EM P+ +++ L Y
Sbjct: 324 KTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPN---ERSYTALTEGYARA 380
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
DV +A F K+ A+ I + LL A C+ +Q A + D N ++
Sbjct: 381 GDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITY 440
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+L+GW G +A + +M + G D + ++ I ++ + +V M+
Sbjct: 441 CTMLDGWARK-GELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMR 499
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+E + + Y +IH AIS + + G+ + N L+ L
Sbjct: 500 EKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 552
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 179/388 (46%), Gaps = 20/388 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG S Y+ +I + F A+ L++EM P+L T TL+ + ++ V
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF----CNKDVFPFNTK 173
V F + KF I F LL CR + +A L+F C +D+ P
Sbjct: 338 GVRLR---FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA-FLLFDELKC-RDLVP-TVI 391
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G C + G A R+ EM+ +G+ D+ +++ +++ K + F++
Sbjct: 392 TYNTLIHGLC-MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G++ DR YN I K A S+ + M G P+V+TYN + LC+
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
+EA + M+ G+ P TY + ++ +R EVF M G P+ T
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN---EMLSKGVAPSVVT 567
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + F ++++ E + +Y A+I+ L + +++EA++Y+ EM+
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627
Query: 408 EKQLLPEPKTDELLQDWSYNKQFVERQI 435
EK +LP + +L + S N + E +
Sbjct: 628 EKGILPNKFSYTILINESCNMGYWEEAL 655
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 161/381 (42%), Gaps = 10/381 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y+TM+ K + D A L+ EM+ P+ VT +L+
Sbjct: 207 EQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYN---VLVNGLSKK 263
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ +A V + L++ C+ +A L+ N+ FP +
Sbjct: 264 GELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP-TLST 322
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C + + R + +M + D+VSF+ ++ Y + + + LFD++
Sbjct: 323 YNTLMYGLCKWVQVTGVRLR-FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K + YN +IH L + A+ L K M ++G+ P++ TY L+ K +
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYV 441
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
AR F+EML +G+ P Y+ + I F + E M G P TY +
Sbjct: 442 SMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + F + + +G PD +YT++I+ NG L +A + + EM K +
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 412 LPEPKTDELLQDWSYNKQFVE 432
P T +L KQ ++
Sbjct: 562 APSVVTYTVLIHAHAAKQMLD 582
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
FP + ++N+ ++ C G+ EA + M G+ D V+++ II+ + K +L K
Sbjct: 491 FPPDVITYNVFVHALCQQ-GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKA 549
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+F++M G+ Y +IHA A +++ A M EK V NV+TYN++I
Sbjct: 550 REVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIING 609
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
LC R++DEA + FDEM ++GI P +Y ++ G EE L M QP
Sbjct: 610 LCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669
Query: 345 NDTYIMLIKKFSRWRQ 360
+ T+ + +K R Q
Sbjct: 670 SFTHSVFLKNLHRDYQ 685
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V+ +M + G+ DV + + I+ L K ++ M++ GI+ YN ++ +
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K V A+ L+ M+E+G PN VTYN L+ L K +L++A+ +EML G++ +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ ++ + G E F L+E M PT TY L+ +W Q V ++++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ PD S+ +L++ G + EA + E+K + L+P T
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 47/285 (16%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A+ V+ M Q GI VV+++ ++ Y K + + L L +M+ G + YN ++
Sbjct: 198 KAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLV 257
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L+K ++ A L++ M G+ + TYN LI C+ EA +EM+ R
Sbjct: 258 NGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
Query: 311 PTIRTYHAFL--------------------------DII----------RTG--EEVFGL 332
PT+ TY+ + DI+ RTG E F L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+ ++ PT TY LI W ++ E+++ G PD +YT L++ F
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV-ERQIA 436
G + A ++ EM K L P+ ++YN + V E +IA
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPD--------RFAYNTRIVGEMKIA 474
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +FD+M R G+ D K N ++ L L+ A ++ ME+ G+ P VVTYN+++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
CK ++D+A + EM +RG P TY+ ++ + + G E+ GL+E M G +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY LI F + F F + E+ P S+Y L++ L
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 167/388 (43%), Gaps = 15/388 (3%)
Query: 42 RNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ + + A F +AGK Q ++H+ Y ++I L + R F L+ ++ +
Sbjct: 71 QQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIK--- 127
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ + +IR Y A+ F + F + LL+A + K D H
Sbjct: 128 CGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRY-DLVHA 186
Query: 161 MFCN----KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
MF N V P N + NI++ C A +V EM G+ +VV+++ I+
Sbjct: 187 MFKNCRSKYGVLP-NVFTCNILIKALCKK-NDVESAVKVLDEMPAMGMIPNVVTYTTILG 244
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
YS ++ ++F ++ G D Y +++ + + DAI LM M E GV P
Sbjct: 245 GYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEP 304
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLL 333
N VTY +++ CK +K EAR D+ML+R P+ +D++ EE L
Sbjct: 305 NEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELW 364
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ M K C P N LI + + K++ E E G P +Y LI +
Sbjct: 365 KRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEK 423
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+L EA + + +M EK P T +L
Sbjct: 424 GELSEAGKLWDDMMEKGYKPNAFTYNML 451
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 29/336 (8%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +I L K ++A ++DEM P++VT T+L Y + D+ A F
Sbjct: 205 NILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTIL---GGYSSRGDMVNANKVFGE 261
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNII 186
+ + L++ C + DA LM V P N ++ +++ +C
Sbjct: 262 LFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEP-NEVTYGVMVEAYCKE- 319
Query: 187 GSSREAERVWMEMSQR------GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ EA + +M +R +C V+ C +A + + L+ +M +
Sbjct: 320 KKAGEARNLLDDMLERQYVPSSALCCKVIDVLC------EAGKIEEACELWKRMLKKNCM 373
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D + + +IH L K V +A L E +G P+++TYN+LI +C+ +L EA +
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEKGELSEAGKL 432
Query: 301 FDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+D+M+++G P TY+ + I +E +LE M C P TY +LI++ +
Sbjct: 433 WDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCK 492
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
G V KV + +G G D S+ LFLN
Sbjct: 493 MGMEGEVDKVVSMAMASG-GVDSDSWD-----LFLN 522
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 118/266 (44%), Gaps = 12/266 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C +++F N+I N + G A R ++ + + V S + +++ + + +
Sbjct: 128 CGENIF------INVIRN--YGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNK 179
Query: 223 NLHKVLRLFDQMK-RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
V +F + + G+ + N +I AL K V+ A+ ++ M G+ PNVVTY
Sbjct: 180 RYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTY 239
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRK 338
+++ + A + F E+ RG P TY ++ G + L++ M +
Sbjct: 240 TTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGE 299
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G +P TY ++++ + + ++ G + +++ E P + +I L GK+EE
Sbjct: 300 NGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEE 359
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDW 424
A + + M +K +P+ L W
Sbjct: 360 ACELWKRMLKKNCMPDNAIMSTLIHW 385
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 11/350 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+F A +L+D M G P++V T+ I C D+ A+ FY ++
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTV---INGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 140 DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ L+S L DA L+ + + P N F +++ + G+ EA ++
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDP-NVIFFTALIDTFVKE-GNLLEARNLYK 278
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM +R + +V +++ +I+ + L +FD M G D YN +I K +
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+D + L M +G+ + TYN+LI C+A KL+ A++ F+ M+ G+SP I TY+
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 318 AFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
LD + E+ ++E ++K TY ++I+ R + + ++ ++
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQD 423
G PD +Y +I L G EA + MKE +P + DE L+D
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 508
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 24/375 (6%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
KFD A++L EM PS+V +L +I + ++ I ++ + + +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAK---MNKFDIVIYLYHKMENLGISHDLY 115
Query: 140 DFQGLLSALCRYKNVQDAE----HLMFCNKDVFPFNTKSFNIILNGWCNIIGSS-REAER 194
F L+ CR + A +M K F + + +LNG+C G+ +EA
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMM---KLGFRPSIVTLGSLLNGFCQ--GNRFQEAVS 170
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ M G +VV ++ +I+ K R+L+ L +F M++ GI D YN +I L+
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
DA L++ M ++ + PNV+ + +LI K L EAR + EM++R + P +
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 315 TYHAFLDIIRTGEEVFGLLESMRKM-------GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
TY++ ++ G + G L + M GC P TY LI F + ++ + K+
Sbjct: 291 TYNSLIN----GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ E++ G D +Y LIH GKL A + + M + + P+ T +L D N
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 428 KQFVERQIASLKAHQ 442
+E+ + ++ Q
Sbjct: 407 NGKIEKALVMVEDLQ 421
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 157/356 (44%), Gaps = 49/356 (13%)
Query: 102 TKQTLLILIRRYCAVHD-VGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYKNVQDAEH 159
T +T I+ R+ H A+ F + R A + F LL AL + ++ A
Sbjct: 138 TPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAAS 197
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSR----------------------------- 190
L+ + FP + ++N + +GWC + +SR
Sbjct: 198 LVRALERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFR 257
Query: 191 --EAERVW---MEMSQRGI----C-YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+ + W ++M +RG C DVVS++ ++ A L K ++FD+M R G
Sbjct: 258 SGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCT 317
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
YNA+I K V+DA+++ M KG PNVVTY LI+ LC A K+D A +
Sbjct: 318 PSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKL 377
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRK-MGCQPTNDTYIMLIKKF- 355
D+M + G P ++TY+ + + G E+ L E+M K C P DTY ++I
Sbjct: 378 LDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMF 437
Query: 356 --SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
R ++ E+ + G P R + +++ L L G +E + + M+EK
Sbjct: 438 VRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGN-QELSRELLRMQEK 492
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 23/337 (6%)
Query: 117 HDVGRAINAFYAYKRFK-----FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFN 171
H RA+ F+A R + D L+A R+ + L + F
Sbjct: 79 HHAPRALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTSSILALFPRHGLAFT 138
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQ-RGICYDVVSFSCIISCYSKARNLHKVLRL 230
++F I+ + A R ++ + + G+ D+ F+ ++ K+R+ K L
Sbjct: 139 PRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASL 198
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
++R D YN + + + A+ +++ M E G+AP TYN ++K +
Sbjct: 199 VRALERR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFR 257
Query: 291 ARKLDEARQAFDEMLQRG-----ISPTIRTYHAFLDIIRTGEEVFGLLESMRKM------ 339
+ +L A F +M +RG P + +Y L G V G L+ RK+
Sbjct: 258 SGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLH----GLGVAGQLDKARKVFDEMSR 313
Query: 340 -GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
GC P+ TY LI+ + + V++++ G P+ +YT LI L GK++
Sbjct: 314 EGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDR 373
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
A + +MK + P +T +L + + + +E+ +
Sbjct: 374 AMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKAL 410
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 200 SQRGICYDVVSFSCIISCYSKA-RNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGR 257
+ G+ + +F + ++ + R +R F + R G+ D ++N+++ AL K R
Sbjct: 131 PRHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSR 190
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
A SL++++E + P+ VTYN+L C+ + A
Sbjct: 191 HAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDTSRA-------------------- 229
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
LDI+R M + G PT TY +++K F R Q + + + ++ + G+
Sbjct: 230 --LDILR----------QMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSN 277
Query: 378 -----PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
PD SYT ++H L + G+L++A + + EM + P T L + K VE
Sbjct: 278 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVE 337
Query: 433 RQIA 436
+A
Sbjct: 338 DAVA 341
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 13/357 (3%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ GK+ + D+A L DEM+ P+ TL+ + Y + V A+N
Sbjct: 231 TVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGI---YFKLGKVEEALN 287
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + + + + L+ L + V+DA + K++ K +++N N
Sbjct: 288 LVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVY---KNMLKDGCKPDVVLMNNLIN 344
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIE 240
I+G S +EA ++ EM +VV+++ II S + + ++MK+ G+
Sbjct: 345 ILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVV 404
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
Y+ +I K V+ A+ L++ M+EKG P Y SLI L KA++ + A +
Sbjct: 405 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANEL 464
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F E+ + S ++R Y + + G E GL M+K+GC P Y LI R
Sbjct: 465 FQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVR 524
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
F ++ + ENG PD +S+ +++ L G + A + + +MK + P+
Sbjct: 525 ADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPD 581
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 179/394 (45%), Gaps = 13/394 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +K+ LV EVL + + FF WAGK+ + H + Y +I L + R
Sbjct: 83 LEVLKLKLDIRLVREVLK-IDVEVHVKIQFFKWAGKKRNFEHDSTTYMALIRCLDENRLV 141
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W I +M P + L +++ V V +A++ FY K K +
Sbjct: 142 GELWRTIQDMV---KSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTY 198
Query: 142 QGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
++ L + ++ V + + M FP +T +++ +++ + + A R++ E
Sbjct: 199 NSVILMLMQEGHHEKVHELYNEMCSEGHCFP-DTVTYSALISAFGK-LNRDDSAVRLFDE 256
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G+ ++ ++ Y K + + L L +M+ Y +I L K
Sbjct: 257 MKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGR 316
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+DA + K+M + G P+VV N+LI L ++ +L EA + F+EM +P + TY+
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 319 FLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + E LE M+K G P++ TY +LI F + + + E+ E
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
G P ++Y +LI++L + E A++ + E+KE
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 162/366 (44%), Gaps = 25/366 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G + + Y T++ I K+ K + A L+ EMR P++ T L IR +
Sbjct: 258 KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTEL---IR---GL 311
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHL------MFCNKDV 167
GR +A+ YK D L++ L R +++A L + C +V
Sbjct: 312 GKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNV 371
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHK 226
+NT I+ EA W+E M + G+ ++S +I + K + K
Sbjct: 372 VTYNT-----IIKSLFEDKAPPSEASS-WLERMKKDGVVPSSFTYSILIDGFCKTNRVEK 425
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L L ++M G Y ++I++L K + + A L + ++E + +V Y +IK
Sbjct: 426 ALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIK 485
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQP 343
K + +EA F+EM + G P + Y+A + ++R +E F L +M + GC P
Sbjct: 486 HFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNP 545
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+++ +++ +R +++ ++ + PD SY ++ L G EEA +
Sbjct: 546 DINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLM 605
Query: 404 MEMKEK 409
EM K
Sbjct: 606 KEMNSK 611
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
S I+ + + ++K L +F Q+K YN+VI L + + L M
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMC 222
Query: 271 EKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG-- 326
+G P+ VTY++LI K + D A + FDEM + G+ PT + Y + I + G
Sbjct: 223 SEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EE L+ MR C PT TY LI+ + + + + V+ + ++G PD L
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNL 342
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLP 413
I+ L + +L+EA + + EM+ P
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTP 369
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 39/303 (12%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL--------------------- 107
+ +I ILG+ + A L +EMR P++VT T++
Sbjct: 340 NNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMK 399
Query: 108 ------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ 155
ILI +C + V +A+ F + L+++L + K +
Sbjct: 400 KDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYE 459
Query: 156 DAEHLM-FCNKDVFPFNTKSFNIILN--GWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
A L ++ + + + +++ G C G EA ++ EM + G DV +++
Sbjct: 460 AANELFQELKENCGSSSVRVYAVMIKHFGKC---GRFNEAMGLFNEMKKLGCIPDVYAYN 516
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I+ +A + + LF M+ G D +N +++ LA+ K A+ + M+
Sbjct: 517 ALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSS 576
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGL 332
+ P+ V+YN+++ L +A +EA + EM +G + TY + L+ + +E +
Sbjct: 577 TIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
Query: 333 LES 335
ES
Sbjct: 637 AES 639
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+ E D Y A+I L + RLV + ++ M + A + ++K L + + +
Sbjct: 117 KKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMV 176
Query: 295 DEARQAFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMG-CQPTNDTYIM 350
++A F ++ R PT TY++ L +++ G E+V L M G C P TY
Sbjct: 177 NKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSA 236
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + + + ++++E+ ENG P YT L+ F GK+EEA EM+ ++
Sbjct: 237 LISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRR 296
Query: 411 LLP 413
+P
Sbjct: 297 CVP 299
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F ++NG+C + EA + +M + GI DVV ++ II K +++ L LFDQ
Sbjct: 144 TFTSLINGFC-LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI D +Y ++++ L +DA SL++ M ++ + P+V+T+N+LI K K
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
+A + ++EM++ I+P I TY + ++ + ++F L+E+ GC P
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET---KGCFPDVVA 319
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI F + ++ + K++ E+S+ G + +YT LI GK A + + M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 408 EKQLLPEPKT-DELLQDWSYNKQ 429
+ + P +T + LL YN +
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGK 402
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 157/349 (44%), Gaps = 13/349 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K + A +L D+M P +V +L + C A +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL---VNGLCNSGRWRDADSLLR 236
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ K + F L+ A + DAE L + P N ++ ++NG+C +
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP-NIFTYTSLINGFC-M 294
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA +++ M +G DVV+++ +I+ + K + + +++F +M + G+ +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y +I + A + M +GV PN+ TYN L+ LC K+ +A F++M
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 306 QR---GISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+R G++P I TY+ L + G E+ + E MRK TY ++I+ +
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+ N ++ + G P+ +YT +I LF G EAH + +MKE
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 162/362 (44%), Gaps = 36/362 (9%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G+ + ++I + + A +++++M P +V T+ I
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI---ID 185
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
C V A++ F + + + + L++ LC +DA+ L+ + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +FN +++ + G +AE ++ EM + I ++ +++ +I+ + + + +
Sbjct: 246 -DVITFNALIDAFVKE-GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F M+ G D Y ++I+ K + V DA+ + M +KG+ N +TY +LI+
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
+ K + A++ F M+ RG+ P IRTY+ L + +V
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV-------------------- 403
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++ +F+ + +G P+ +Y L+H L NGKLE+A + +M+++
Sbjct: 404 ---------KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 410 QL 411
++
Sbjct: 455 EM 456
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 154/371 (41%), Gaps = 55/371 (14%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHTMIAIL 75
M N++ E GIK + + ++ + + + L+ ++ G Y +++ L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK---RF 132
++ A +L+ M + P ++T L+ A G+ ++A Y R
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALID------AFVKEGKFLDAEELYNEMIRM 276
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNIIGSSR 190
A I + L++ C V +A + + K FP + ++ ++NG+C
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP-DVVAYTSLINGFCKC-KKVD 334
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
+A +++ EMSQ+G+ + ++++ +I + + + +F M G+ + + YN ++
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 251 HALAKGRLVKDAISLMKSMEEK---GVAPNVVTYNSLI---------------------- 285
H L VK A+ + + M+++ GVAPN+ TYN L+
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 286 -------------KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEV 329
+ +CKA K+ A F + +G+ P + TY + + R G E
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 330 FGLLESMRKMG 340
L M++ G
Sbjct: 515 HVLFRKMKEDG 525
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 48/351 (13%)
Query: 3 TLVDILREFSHKRSEMR--NKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQ 58
T++D L + H + +++E GI+ + + +++ + N W A + K+
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
++ +I K KF A L +EM P++ T +L I +C
Sbjct: 242 K-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL---INGFCMEGC 297
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNI 177
V A FY + + + L++ C+ K V DA + + ++ NT ++
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
++ G+ + G A+ V+ M RG+ ++ +++ ++ C + K L +F+ M++
Sbjct: 358 LIQGFGQV-GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 238 ---GIECDRKVYNAVIHALA-KGRL----------------------------------V 259
G+ + YN ++H L G+L V
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
K+A++L S+ KGV PNVVTY ++I L + EA F +M + G+S
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+ +++ +AK + I+L ++ GV+ ++ T N L+ C++ + A +M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 306 QRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+ G P I T+ + ++ G EE ++ M +MG +P Y +I +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+++++ G PD YT+L++ L +G+ +A M ++++ P+ T L
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 423 D 423
D
Sbjct: 255 D 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
R++ +H+L +A+ L M E P+++ + L+ + K +K D D
Sbjct: 41 REILRNGLHSLQ----FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 303 EMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+ G+S + T + ++ + + L M K+G +P T+ LI F
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + N++ E G PD YT +I +L NG + A + +M+ + P+
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 169/394 (42%), Gaps = 53/394 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ L K A + + M+ PSLVT +LI C + G+A++ F
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYN---VLINSRCNAGEFGKALDLFQ 69
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGW 182
+ KR K +E + L+S LC N + A L+ +D N +++ I+
Sbjct: 70 SMKREKR---VEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
E+ +V EM G DV +F+ ++ ++++ N+ K ++ M G + D
Sbjct: 127 VK-EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185
Query: 243 RKVYNAVIHALAKGRLVKDAISLMK--SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
Y+ +IH LAK + +++ ++ +M G PNV+T+++LI LC+ +L++A +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM--------------------- 339
F ML+ G P TY + + E+V E KM
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305
Query: 340 ------------------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G QPT T+ LI F + + G ++ E+ G D
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+Y LI L KL+EA + Y +M+EK+ L +P
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDE--MRGGETGPSLVTKQTLLILIRRYCA 115
+SGY YH +I L K+ K D + ++ E MR P+++T T LI C
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFST---LIHGLCR 235
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKS 174
++ +A+ F + + L++ LCR + V A L + P + +
Sbjct: 236 TGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVA 295
Query: 175 FNIILNGWCNIIGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+N ++ G+C GS EAE+++ EMS G+ +V+F+ +I + K L + L +
Sbjct: 296 YNSLIAGYCK-RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+ D Y +I L++ + +A+ + K M EK + V+ S + LCK
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 414
Query: 294 LDEARQAFDEMLQRGISPTIRTY 316
+D+A F+ + G P T+
Sbjct: 415 IDQAYAVFEATRKSGAVPNPETF 437
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG-IECDRKV 245
G +A V+ M +V+++ +I+ A K L LF MKR +E DR
Sbjct: 24 GMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWT 83
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN +I L + A L+ M +K +A NV TY+S+IK L K K +E+ + +EM+
Sbjct: 84 YNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMM 143
Query: 306 QRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
G +P + ++ + + + EV+ + M + G +P N +Y +LI ++
Sbjct: 144 AAGCNPDVFAFNGVMQGFARSNNMEKAREVY---QHMVESGYKPDNVSYHILIHGLAKIG 200
Query: 360 QFGNVFKVWNEISENGNG--PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ K+ +E++ G P+ +++ LIH L G+LE+A + + M E P T
Sbjct: 201 KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 154/361 (42%), Gaps = 43/361 (11%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WEA AGK+ Y T++ L KV++F+ +IDEM PS
Sbjct: 279 WEAVGIKKDLAGKE--LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVS 336
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
+L+ +R+ V + A+N F + I + L+ +LC+ +N
Sbjct: 337 SLVEGLRKRGKVEE---ALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD--------- 384
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
EAE ++ M + G+C + V++S +I + + L
Sbjct: 385 --------------------------EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L +M MG++ YN++I+ K + A SLM M K + P VVTY SL
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC 341
+ C K+++A + + EM +GI P+I T+ L + R G + L M +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+P TY ++I+ + F+ NE+ E G PD SY LIH L L G+ EA
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 402 Y 402
+
Sbjct: 599 F 599
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 194/465 (41%), Gaps = 86/465 (18%)
Query: 27 IKVSSELVS---------EVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
I +SSELVS E+L +D + FF + G G+ HST + +I L +
Sbjct: 57 IALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQ 116
Query: 78 VRKFDTAWALIDEMRGGETGPS--------------LVTKQTLLILIRRYC--------- 114
F A +L+ + PS L + + +LI+ Y
Sbjct: 117 ANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGV 176
Query: 115 --------------AVHDVGRAINAFYAYKRFKFAVGIED-------------FQGLLSA 147
V + ++ ++ F A+ + D + G++ +
Sbjct: 177 LVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRS 236
Query: 148 LCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW----- 196
LC K++ A+ ++ C+ ++ P+N ++++G C + ++VW
Sbjct: 237 LCELKDLSRAKEMIVQMEATGCDVNIVPYN-----VLIDGLC-------KKQKVWEAVGI 284
Query: 197 -MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+++ + + DVV++ ++ K + L + D+M R+ ++++ L K
Sbjct: 285 KKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRK 344
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
V++A++L+K + E GV+PN+ YN+LI LCK R DEA FD M + G+ P T
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVT 404
Query: 316 YHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y +D+ R G + L M MG +P+ Y LI ++ + E+
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
P +YT+L+ GK+ +A + Y EM K ++P T
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYT 509
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 158/399 (39%), Gaps = 43/399 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G S + T+++ L + A L EM P+ VT ++I YC ++
Sbjct: 502 GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN---VMIEGYCEEGNM 558
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNII 178
+A ++ L+ LC +A+ + +K N + +
Sbjct: 559 SKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+G+C G EA V +M RG+ D+V + +I K ++ L L +M G
Sbjct: 619 LHGFCRE-GKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ D +Y ++I A +K K+A + M +G PN VTY ++I LCKA ++EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG-------------------------------- 326
+M P TY FLDI+ G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 327 ------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
EE L+ M G P TY +I + R ++WN ++E G PDR
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+Y LIH + G++ +A + EM + L P +T E
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSE 896
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K + A L +MR G + P+ VT L ++ + V D+ +A+
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK--GVGDMKKAVELHN 777
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
A +GLL+ NT ++N+++ G+C G
Sbjct: 778 AI-----------LKGLLA------------------------NTATYNMLIRGFCRQ-G 801
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA + M G+ D ++++ +IS + ++ K + L++ M GI DR YN
Sbjct: 802 RMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+IH + A L M +G+ PN T + I
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 9/328 (2%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
LI YC D+ A++ KR + G++ F ++ C V A +
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P NT +FN +++G C++ G + A R+ M + G+ D +++ I L +
Sbjct: 367 LSP-NTVTFNSLISGQCSV-GERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
LF + GI+ +Y +++H + + A LM+ M + P+V TYN+LI
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
LCK ++LD A D+M ++GI PT T++ + + + + + E M GC+P
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544
Query: 344 TNDTYIMLIKK--FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
TY + I F + N+ E+ E G PD +Y A+I A G E+A
Sbjct: 545 DKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
+++M + P+ T +L ++ NK
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKD 632
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 167/406 (41%), Gaps = 46/406 (11%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYC 114
+++G A T Y+ ++ L + A L +M R G + + + ILI+ C
Sbjct: 117 REAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWG----ACYDRYSYTILIKGLC 172
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
A + A F R G+ + LL LC+ + V +AE L+ NK V P N
Sbjct: 173 AAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP-NV 231
Query: 173 KSFNIILNGWCN----------------------------II------GSSREAERVWME 198
++N ++ G C ++ G +V E
Sbjct: 232 VTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHE 291
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+G+ +V++++ +I+ Y K ++ L + MKR + + +N VIH G
Sbjct: 292 AIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGK 351
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V A++ + M G++PN VT+NSLI C + A + D M + G+ P +TY
Sbjct: 352 VHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAI 411
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
F+D + EE L + G + N Y L+ + + + F + +++
Sbjct: 412 FIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
PD +Y LI L +L+ A +MK++ + P T +L
Sbjct: 472 CMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 156/371 (42%), Gaps = 36/371 (9%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
GKV K A A + +M G P+ VT +L I C+V + A+ + +
Sbjct: 350 GKVHK---AMAFLTQMAGAGLSPNTVTFNSL---ISGQCSVGERKIALRLLDLMEEYGVL 403
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-NTKSFNII----LNGWCNIIGSSR 190
+ + + ALC +++A L C P K+ N+I ++G+C + G
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSC----LPMKGIKAHNVIYTSLVHGYCQV-GDID 458
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A + +M+ DV +++ +I K + L + + L D+MK+ GIE +N +I
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP--LCKARKLDEARQAFDEMLQRG 308
+ + DA + + M G P+ TY I A K + A EM + G
Sbjct: 519 KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAG 578
Query: 309 ISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR-------- 357
+ P + TY+A + + G E+ F M + P TY +L+
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638
Query: 358 ----WRQFG--NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ- 410
W+ N+ +++ ++ E+ P S+Y AL+ L +LEE ++M+
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698
Query: 411 LLPEPKTDELL 421
LL E +D LL
Sbjct: 699 LLDEDMSDYLL 709
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
S+A L +L F M + G +R YN +I+A K L+ DA + + M E G+AP+
Sbjct: 66 SRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDT 125
Query: 279 VTYNS------------------------------------LIKPLCKARKLDEARQAFD 302
TYN LIK LC A ++D+A + F
Sbjct: 126 FTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFA 185
Query: 303 EMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M + P + TY LD +R E LL M G P TY LI +
Sbjct: 186 KMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG 245
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+F +V K+ ++ + PD +YT ++H L +GK+
Sbjct: 246 RFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 145/398 (36%), Gaps = 37/398 (9%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A + F + AH+ Y +++ +V D+A+ L+++M P + T T
Sbjct: 423 EEAHSLFSCLPMKGIKAHNVI-YTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNT 481
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM---- 161
L I C V + RAI+ K+ F L+ + K DA +
Sbjct: 482 L---IDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
C D + K I W + +EM + G+ DV +++ II Y
Sbjct: 539 SSGCKPDKQTYTLK----ISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYV 594
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA--------------KGRLVKDAISL 265
A K +M + I+ D Y+ +++ + K V++ L
Sbjct: 595 DAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQEL 654
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR------QAFDEMLQRGISPTIRTYHAF 319
+ M E AP + TY +L++ LC +L+E Q +L +S + +
Sbjct: 655 FEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCN 714
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
L++ R E F SM QP + +L+ G +++++ G D
Sbjct: 715 LEMYREACEQF---RSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYD 771
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ LI L G + M K+ + +T
Sbjct: 772 EVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRT 809
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 171 NTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ ++N +++G+C +G + + EM Q GI DVV+F+ +I+ Y K N+ +
Sbjct: 222 SVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAI 281
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
++F +M++ GI + YN+++ L + V+D+I L++ MEE G+A + T NS++
Sbjct: 282 KVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGF 341
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTN 345
CK + EA D + QRG+ P + TY+ +D R +E ++M G P
Sbjct: 342 CKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNV 401
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI F+ R + +V + +E+ E G D +Y LI AL G++ +A + E
Sbjct: 402 KTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDE 461
Query: 406 MKEKQLLPE 414
M E L P+
Sbjct: 462 MVEVGLEPK 470
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 56/451 (12%)
Query: 30 SSELVSE--VLSWVRNDWE-AAFTFFLWAGKQSG-YAHSTREYHTMIAILGKVRKFDTAW 85
S LV++ VL+ R AA+ FL AG Y S + ++A L + + D A
Sbjct: 114 SGPLVADMLVLALARASQPLAAYEAFLLAGADCPRYRPSAFSVNALLAALVRADRVDLAD 173
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLL 145
P L T I+I +C + +A + + A + + L+
Sbjct: 174 RAFRAALRRRVSPDLFTFN---IVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLI 230
Query: 146 SALCRYKNVQDAEHLMFCNKDVF----PFNTKSFNIILNGWC---NIIGSSREAERVWME 198
C+ V H+ K++ + +FN+++NG+C NI A +V+ E
Sbjct: 231 DGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITA----AIKVFQE 286
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M Q+GI +VV+++ ++S + + ++L ++M+ +G+ C N+V++ K +
Sbjct: 287 MRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGM 346
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ +A + + ++G+ PNV+TYN+L+ + K+ EA A D M +GISP ++TY+
Sbjct: 347 MVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNC 406
Query: 319 FLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ T + V GLL+ M++ G + TY +LI + K+ +E+ E G
Sbjct: 407 LITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 466
Query: 376 NGPDRSSYTALIHA------------------------------LFLN-----GKLEEAH 400
P +Y +I+ +FL GK++EA+
Sbjct: 467 LEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEAN 526
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
EM EK L+P T E++ K +V
Sbjct: 527 VVLNEMLEKGLVPNRITYEIINSGMIEKGYV 557
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 13/357 (3%)
Query: 60 GYAHSTREYHTMI---AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G A S Y+T+I G+V K AL+ EM P +VT +LI YC
Sbjct: 218 GVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFN---VLINGYCKE 274
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
++ AI F ++ + + L+S LCR V+D+ L+ +++ +
Sbjct: 275 PNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTM 334
Query: 176 NIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
N +LNG+C G EAE W++ ++QRG+ +V++++ ++ Y + + + D M
Sbjct: 335 NSVLNGFCKK-GMMVEAEG-WVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAM 392
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
GI + K YN +I R + L+ M+EKGV +VVTYN LI LC ++
Sbjct: 393 AGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEV 452
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLE---SMRKMGCQPTNDTYIML 351
+A + DEM++ G+ P Y+ ++ + G E M K + TY +
Sbjct: 453 RKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVF 512
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+K F + + V NE+ E G P+R +Y + + G + + Y ++ +
Sbjct: 513 LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVSK 569
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 181/416 (43%), Gaps = 49/416 (11%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWA--LIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+G T Y+ +I G ++ D A A L+ EM+ + PS T +LI C
Sbjct: 410 AGLEPDTWTYNLLID--GYLKSHDMAKACELLAEMKARKLTPSPFTYS---VLISGLCHS 464
Query: 117 HDV----------------------GRAINAFYAYKRFKFAVGIED-------------F 141
D+ G I A+ R++ A+ + +
Sbjct: 465 SDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCY 524
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L+ LCR K V++A+ L+ K + P N ++ +N + G + AER + +M
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKP-NAHTYGAFINLYSKS-GEIQVAERYFKDM 582
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
GI + V ++ +I + N + L F M G+ D + Y+A+IH+L+K
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
K+A+ + + GV P+V YNSLI CK +++A Q +DEML GI+P I Y+
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702
Query: 320 LD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
++ + + GE L + + + P TY +I + + FK+++E+ G
Sbjct: 703 INGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
PD Y LI G LE+A + E ++K + + L+ + + + +E
Sbjct: 763 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIE 818
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 18/373 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y+ MI + K + A +L +EM P T +LI Y HD+
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN---LLIDGYLKSHDM 432
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+A K K + L+S LC ++Q A ++ D N N+ +
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL----DQMIRNGVKPNVFM 488
Query: 180 NGWCNIIGSSREAERVWME------MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
G +I + + R M M G+ D+ ++C+I +A+ + + L
Sbjct: 489 YG--TLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M GI+ + Y A I+ +K ++ A K M G+ PN V Y LIK C
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
EA F ML++G+ P IR Y A + + + G +E G+ K G P Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + ++++E+ NG P+ Y LI+ L G++ +A + + E++EK
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 411 LLPEPKTDELLQD 423
L+P+ T + D
Sbjct: 727 LVPDVVTYSTIID 739
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 11/248 (4%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G ++EA V+++ + G+ DV ++ +IS + K ++ K +L+D+M GI + VY
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I+ L K V A L +EEK + P+VVTY+++I CK+ L EA + FDEM+
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMIS 759
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDT------YIMLIKKFSRWRQ 360
+GISP Y +D G+E G LE + + + + LI F + +
Sbjct: 760 KGISPDGYIYCILID--GCGKE--GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 815
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
++++++ + P+ +YT LI A +EEA Q +++M+ + ++P T
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 875
Query: 421 LQDWSYNK 428
L SYN+
Sbjct: 876 LL-LSYNQ 882
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 7/275 (2%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN--IILNGWCNIIGSSREAERVWMEMSQ 201
L+ C+ K ++A+ L+F + N F +++G+ G+ EA R+ EM
Sbjct: 317 LVDGFCKQKRSKEAK-LIFESMPSSGLNPNRFTYTALIDGFIKE-GNIEEALRIKDEMIT 374
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
RG+ +VV+++ +I +KA + K + LF++M G+E D YN +I K +
Sbjct: 375 RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAK 434
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L+ M+ + + P+ TY+ LI LC + L +A + D+M++ G+ P + Y +
Sbjct: 435 ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIK 494
Query: 322 IIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
E LL+ M G P Y LI R ++ + ++ E G P
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +Y A I+ +G+++ A +Y+ +M ++P
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIH 251
+V+ M + I DV +++ +I + K ++ K + +M++ EC + YNA I
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK---ECKPNLFTYNAFIG 284
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L + V +A+ + K M EKG+ P+ TY L+ CK ++ EA+ F+ M G++P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344
Query: 312 TIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY A +D I+ G EE + + M G + TY +I ++ + ++
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
NE+ G PD +Y LI + + +A + EMK ++L P P T +L
Sbjct: 405 NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N + G C G+ EA V M ++G+ D +++ ++ + K + + +
Sbjct: 275 NLFTYNAFIGGLCQT-GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F+ M G+ +R Y A+I K +++A+ + M +G+ NVVTYN++I + K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDT 347
A ++ +A F+EML G+ P TY+ +D ++ LL M+ P+ T
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI +V +++ NG P+ Y LI A + E A + M
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 408 EKQLLPE 414
+LP+
Sbjct: 514 ANGVLPD 520
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 19/276 (6%)
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ L+ C ++ N F+I ++ + ++G EA V++ G F +I C
Sbjct: 158 DSLVRCYREFGGSNLTVFDIFIDKF-RVLGFLNEASSVFIASISEGF------FPTLICC 210
Query: 218 YSKARNLHKV------LRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSME 270
+ R+L K +++ M I D Y VI A K G ++K + L S
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVL--SEM 268
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGE 327
EK PN+ TYN+ I LC+ +DEA + M+++G+ P TY +D + +
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E + ESM G P TY LI F + ++ +E+ G + +Y A+I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ G++ +A + EM L P+ T LL D
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 4/273 (1%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K+ + A L DE+ + P +VT T+ I YC ++ A F
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI---IDGYCKSGNLTEAFKLFD 755
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+ + L+ + N++ A L + + +FN +++ +C G
Sbjct: 756 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH-G 814
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA ++ +M + + ++V+++ +I Y KA + + +LF M+ I + Y
Sbjct: 815 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 874
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+++ + + ISL K ME +G+A + + Y + CK K EA + ++ L
Sbjct: 875 SLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE 934
Query: 308 GISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG 340
GI + A + + +++ +LE + +MG
Sbjct: 935 GIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 11/263 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I GK + A +L E + G SL +L I +C V A F
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSL---IDSFCKHGKVIEARELFD 824
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNI 185
K I + L+ A + + +++AE L +++ P NT ++ +L + N
Sbjct: 825 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP-NTLTYTSLLLSY-NQ 882
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
IG+ + ++ +M RGI D +++ + S Y K + L+L ++ GI+ + V
Sbjct: 883 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 942
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++A+I L K + + + L+ M ++ ++ + T N+L+ K+ DEA + M
Sbjct: 943 FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 1002
Query: 306 QRGISPTIRTYHAFLDIIRTGEE 328
+ G P T + D I TG +
Sbjct: 1003 RLGWVP---TSLSLTDSISTGRD 1022
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 19/347 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K RKF A L DEM P+ +T ++ I +C + + A + FY
Sbjct: 322 YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSM---IDGFCKQNRLDAAEHMFY 378
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + F L+ C K + D L+ + +T ++N +++G+C ++
Sbjct: 379 VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC-LV 437
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A + +M G+C D+V+ + ++ L L +F M++
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRP 497
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L K M +G+ PN +TY+S+I LCK +LD
Sbjct: 498 FNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD 557
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA Q FD M + SP + T++ + + G ++ L M + G TYI LI
Sbjct: 558 EATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
F + ++ E+ +G PD + +++ L+ +L+ A
Sbjct: 618 HGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 177/403 (43%), Gaps = 34/403 (8%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +VT TLL C V A++ F+ R + F L++ LCR V +A
Sbjct: 145 PDVVTFSTLL---HGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEA 197
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D N ++ I++G C I G + A + +M + I +VV +S II
Sbjct: 198 VALLDRMVEDGLQPNQITYGTIVDGMCKI-GDTVSALNLLRKMEEMSHIKPNVVIYSAII 256
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K L+ +M+ GI D YN +I +A L++ M E+ +
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
PNVVTY++LI K RK EA + +DEML RGI P TY++ +D + E +
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F + M GC P T+ LI + ++ + ++ +E++E G D ++Y LIH
Sbjct: 377 FYV---MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF---------VERQIASLK 439
L G L A +M + P+ T + LL N + +++ L
Sbjct: 434 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 493
Query: 440 AHQPQSG-----QNTRVISKKSDQDREFLQQPETRRVVRHQGF 477
A +P +G Q ++ + +FL+ E + + H+G
Sbjct: 494 ASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 22/351 (6%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIEDFQ 142
A AL+D M P+ +T T+ + C + D A+N + + +
Sbjct: 197 AVALLDRMVEDGLQPNQITYGTI---VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYS 253
Query: 143 GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
++ L + DA +L K +FP + ++N +++G+C+ G EA+R+ EM
Sbjct: 254 AIIDGLWKDGRHSDAHNLYTEMQEKGIFP-DLFTYNCMIDGFCSS-GRWSEAQRLLQEML 311
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+R I +VV++S +I+ Y K R + L+D+M GI + YN++I K +
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A + M KG +P+V T+N+LI C A+++D+ + EM + G+ TY+ +
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431
Query: 321 D---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE---- 373
++ L + M G P T L+ + + +++ + +
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491
Query: 374 -------NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
NG PD +Y LI L GK EA + Y EM + ++P T
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTIT 542
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ +M ++ I DV SF+ +I C+ L L F ++ ++G + D ++ ++H L
Sbjct: 99 LYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLC 158
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V +A+ L M PNVVT+ +L+ LC+ ++ EA D M++ G+ P
Sbjct: 159 VEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 214
Query: 315 TYHAFLD-IIRTGEEV--FGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY +D + + G+ V LL M +M +P Y +I + + + ++ E
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQ 429
+ E G PD +Y +I +G+ EA + EM E+++ P T L+ + ++
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334
Query: 430 FVERQ 434
F E +
Sbjct: 335 FFEAE 339
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 20/296 (6%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
A F++ A K G + ++T+I ++ D L+ EM ETG LV T
Sbjct: 373 AEHMFYVMATK--GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT--ETG--LVADTTT 426
Query: 107 L-ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCN 164
LI +C V D+ A++ I LL LC ++DA E
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 165 KDVF------PFN-----TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
K PFN +++NI+++G N G EAE ++ EM RGI + +++S
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINE-GKFLEAEELYKEMPHRGIVPNTITYSS 545
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I+ K L + ++FD M D +N ++ K V D + L M +G
Sbjct: 546 MINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
+ + +TY +LI K ++ A F EM+ G+ P T + L ++ + EE+
Sbjct: 606 IVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEEL 661
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+ F+ ++ + V+ L+ +M+R I CD +N +I + A+S
Sbjct: 77 VIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFG 136
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G P+VVT+++L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 137 KITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREG 192
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QP TY ++ + + + ++ E + P+ Y
Sbjct: 193 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIY 252
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+A+I L+ +G+ +AH Y EM+EK + P+
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 119/270 (44%), Gaps = 22/270 (8%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
T L ++G T Y+T+I V + A L +M P +VT TLL
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL-- 466
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAV-------GIE-DFQG---LLSALCRYKNVQDAE 158
C + A+ F A ++ K + G+E D Q L+S L +AE
Sbjct: 467 -DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCI 214
L ++ + P NT +++ ++NG C SR EA +++ M + DVV+F+ +
Sbjct: 526 ELYKEMPHRGIVP-NTITYSSMINGLCK---QSRLDEATQMFDSMGSKSFSPDVVTFNTL 581
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
+S Y KA + L LF +M R GI D Y +IH K + A+ + + M GV
Sbjct: 582 VSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV 641
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEM 304
P+ +T S++ L +L A +++
Sbjct: 642 YPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
>gi|414589415|tpg|DAA39986.1| TPA: empty pericarp 2 [Zea mays]
Length = 455
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
L +L +F R ++R + +++ + VL RN + FFL+A G+
Sbjct: 55 ALCRVLSDFRGPRHDLRAALSGFAPRLTPAAAAAVLRRCRNLPVPSLRFFLFAAAMPGFT 114
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H + L R F +L+ ++ S +++ +L R Y A
Sbjct: 115 HLPDSLLILAGSLAGARLFPLLRSLLSDLPR-----SALSRDLFPLLFRAYARAGLPEDA 169
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
I AF + +RF F + D LL L V+ AE + F + K++ I+++GW
Sbjct: 170 IRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGW 229
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIEC 241
++ S +A++++ EM +RG+ DV +++ +I + ++ M+R G+
Sbjct: 230 A-VVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAP 288
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y + + + + A+ ++ M + + PNV TYN++I+ LC+ ++DEA
Sbjct: 289 DAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNIL 348
Query: 302 DEMLQRGISPTIRTYHAFLD 321
+EM G P + +Y+ L+
Sbjct: 349 NEMATYGEKPDVWSYNTLLN 368
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F + Y++A +R F M+R ++++ L+ LV+ A + +
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 212
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+ + TY LI +A++ FDEM++RG+ P + Y+A +D + G +V
Sbjct: 213 FQ-FDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVA 271
Query: 331 GLLESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E ++ M G P TY ++ + +V + + P+ +Y A+
Sbjct: 272 LAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAV 331
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
I L G+++EA+ EM P+ WSYN
Sbjct: 332 IRLLCELGEVDEAYNILNEMATYGEKPD--------VWSYN 364
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 16/345 (4%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + ++I L KF A DEM P+L T T+ I+ +C +
Sbjct: 149 GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI---IKGFC---KI 202
Query: 120 GRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
G+ A K+ A G D + ++ LC+ + V +A + K V P + +
Sbjct: 203 GKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP-DVFT 261
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++I+++G CN EA ++ EM I DVV+F+ ++ K L + + M
Sbjct: 262 YSILMHGLCNS-DQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+E + YN++++ V +A + +M KG PNVV+YN LI CKA+++
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIML 351
DEAR+ FDEM RG+ P Y+ + + + G E L + M+ GC P T +L
Sbjct: 381 DEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTIL 440
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+ + N +++ + ++ P+ +Y LI A++ +GK+
Sbjct: 441 LDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
F + +F+ ++NG C +R E + EM G ++ +++ II + K
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAME-FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA 208
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ L +M + G D +YN +I L K RLV +A+ + ++ KGV P+V TY+ L+
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHG 268
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPT 344
LC + + +EA F+EM+ I P + T++ +D + + G E G+++ M + G +P
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY L+ + + V++ + G P+ SY LI+ +++EA + +
Sbjct: 329 YATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFD 388
Query: 405 EMKEKQLLP 413
EM + L+P
Sbjct: 389 EMSFRGLIP 397
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 138 IEDFQGLLSALCRYK------NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE 191
I +F LLSAL R K ++ L+ +DVF FNI++N + +
Sbjct: 84 IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVF-----HFNILINCFSRL-QRVDF 137
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
A V ++ + G D V+FS +I+ + + FD+M G + + YN +I
Sbjct: 138 AFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIK 197
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
K A+ L+K M++ G P++V YN++I LCK R + EA F E+ +G+ P
Sbjct: 198 GFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP 257
Query: 312 TIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
+ TY + + EE L M + P T+ +L+ K + +
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGII 317
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ E G P+ ++Y +L++ L K+ EA + M K +P
Sbjct: 318 KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMP 362
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+V F ++S + ++ VL L +++ + IE D +N +I+ ++ + V A S++
Sbjct: 84 IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH----AFLDII 323
+ + G P+ VT++SLI LC K A + FDEM+ G P + TY+ F I
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
+T V GLL+ M K G +P Y +I + R +++EI G PD +Y
Sbjct: 204 KTTVAV-GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY 262
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ L+H L + + EEA + EM ++P+ T +L D
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVD 302
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 16/342 (4%)
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED---FQ 142
L EMR P +VT TLL CA + G A ++ + D +
Sbjct: 235 GLFAEMRHEGIQPDIVTYNTLL------CACSNRGLGDEAEMVFRTMNEGGVVPDITTYT 288
Query: 143 GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ + + L+ + P S+N++L + I G+ +A V+ M
Sbjct: 289 YLVDTFGKLNRLDKVSELLKEMASTGNVP-EISSYNVLLEAYARI-GNIEDATGVFRLMQ 346
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+ G + ++S ++ Y K +V LF +MK E D YN +I +G K
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFK 406
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
+ ++L M E+ V PN+ TY LI K D+A++ M ++G+ P+ + Y +
Sbjct: 407 EVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVI 466
Query: 321 DIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ EE L +M +MG +PT +TY LI F+R + + ++ + G
Sbjct: 467 EAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVA 526
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+R S+ +I G+ EEA + Y+EM++ +L+P+ +T E
Sbjct: 527 RERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLE 568
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 153/363 (42%), Gaps = 44/363 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + S Y +I G+ K++ + L++ M+ PS++T T++ CA
Sbjct: 173 GVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVI----NSCAR--- 225
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLS--ALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
G D++GLL A R++ +Q D+ +NT
Sbjct: 226 -----------------GGLDWEGLLGLFAEMRHEGIQ---------PDIVTYNT----- 254
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L C+ G EAE V+ M++ G+ D+ +++ ++ + K L KV L +M
Sbjct: 255 -LLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMAST 313
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + YN ++ A A+ ++DA + + M+E G PN TY+ L+ K + DE
Sbjct: 314 GNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEV 373
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
R+ F EM P TY+ +D+ G +EV L M + +P +TY LI
Sbjct: 374 RELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFA 433
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + K+ +SE G P +YT +I A EEA M E P
Sbjct: 434 CGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPT 493
Query: 415 PKT 417
+T
Sbjct: 494 IET 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 156/375 (41%), Gaps = 11/375 (2%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
DWE F + G Y+T++ D A + M G P + T
Sbjct: 229 DWEGLLGLFAEM-RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--M 161
L+ + + V + + I + LL A R N++DA + +
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVP---EISSYNVLLEAYARIGNIEDATGVFRL 344
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
P N ++++I+L G G E +++EM D +++ +I + +
Sbjct: 345 MQEAGCVP-NAETYSILL-GLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEG 402
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+V+ LF M +E + + Y +I A KG L DA ++ M EKG+ P+ Y
Sbjct: 403 GYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAY 462
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRK 338
+I+ +A +EA + M + G PTI TY+ + + G +E +L M
Sbjct: 463 TGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGD 522
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G D++ +I+ F + QF K + E+ ++ PD + A++ + G ++E
Sbjct: 523 FGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDE 582
Query: 399 AHQYYMEMKEKQLLP 413
+ + + E+K +LP
Sbjct: 583 SVEQFQEIKASGILP 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ EM G+ V S++ +I+ Y + L L ++MK+ + YN VI++ A
Sbjct: 165 IFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCA 224
Query: 255 KGRLV-KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL-DEARQAFDEMLQRGISPT 312
+G L + + L M +G+ P++VTYN+L+ C R L DEA F M + G+ P
Sbjct: 225 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCA-CSNRGLGDEAEMVFRTMNEGGVVPD 283
Query: 313 IRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
I TY +D + ++V LL+ M G P +Y +L++ ++R + V+
Sbjct: 284 ITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFR 343
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E G P+ +Y+ L+ +G+ +E + ++EMK P+ T L D
Sbjct: 344 LMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLID 397
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +IS + L K +F++M G+ Y A+I++ + + ++ L++ M+
Sbjct: 146 YTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMK 205
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLD--EARQAFDEMLQRGISPTIRTYHAFLDIIRT--- 325
++ V+P+++TYN++I C LD F EM GI P I TY+ L
Sbjct: 206 KERVSPSILTYNTVINS-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGL 264
Query: 326 GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
G+E + +M + G P TY L+ F + + V ++ E++ GN P+ SSY
Sbjct: 265 GDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNV 324
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
L+ A G +E+A + M+E +P +T +L
Sbjct: 325 LLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSIL 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 179/422 (42%), Gaps = 18/422 (4%)
Query: 4 LVDILREFSH--KRSEMRNKIEECG--IKVSS-ELVSEVLSWVRNDWEAAFTFFLWAGKQ 58
LVD + + K SE+ ++ G ++SS ++ E + + N +A F L ++
Sbjct: 290 LVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM--QE 347
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G + Y ++ + GK ++D L EM+ T P T TL+ + +
Sbjct: 348 AGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKE 407
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFN 176
V + F+ +E ++GL+ A + DA+ ++ K + P ++K++
Sbjct: 408 V---VTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIP-SSKAYT 463
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ + EA M++ G + +++ +I +++ + + +M
Sbjct: 464 GVIEAYGQA-AMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGD 522
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ +R +N VI +G ++AI ME+ + P+ T +++ C A +DE
Sbjct: 523 FGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDE 582
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIK 353
+ + F E+ GI P + Y L + + E + LL+ M + +IK
Sbjct: 583 SVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQVIGQMIK 642
Query: 354 -KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
F + V V+++++ G G Y L+ AL+ G+ E A + E ++
Sbjct: 643 GDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEATKRGHF 702
Query: 413 PE 414
PE
Sbjct: 703 PE 704
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
NK P N S+ I+++G+C + G EA V EMS G+ + V F+C+IS + K
Sbjct: 417 NKGCKP-NVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + + +F +M R G + D +N++I L + +K A+ L++ M +GV N VTYN+
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMG 340
LI + ++ EAR+ +EM+ +G TY++ + + R GE + L E M + G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+N + +LI R + E+ G+ PD ++ +LI+ L G++E+
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
+ +++ + + P+ T L W FV
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 177/418 (42%), Gaps = 61/418 (14%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL 106
+ F W G Q+GY HS Y +I LG +F T L+ +M+ +V K++L
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMK----DEGIVFKESL 148
Query: 107 LI-LIRRYCAVHDVGRAI-------NAFYAYKRFK-FAVGIEDFQGLLSALCRYKNVQDA 157
I ++R Y G+ N + FK + V +E L+S C +K +
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI---LVSGNC-HKVAANV 204
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ M K P +F +++ +C + A + +M++ G + V + +I
Sbjct: 205 FYDMLSRK--IPPTLFTFGVVMKAFC-AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
SK +++ L+L ++M MG D + +N VI L K + +A ++ M +G AP+
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 278 VVTYNSLIKPLCKARKLDEARQAF--------------------------------DEML 305
+TY L+ LCK ++D A+ F D +
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 306 QRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
GI P + TY++ + ++ EV L MR GC+P +Y +L+ F +
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEV---LHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + V NE+S +G P+ + LI A ++ EA + + EM K P+ T
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 14/304 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y ++ K+ K D A+ +++EM P+ V L I +C
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL---ISAFCKE 472
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP----FNT 172
H + A+ F R + F L+S LC V + +H ++ +D+ NT
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVVANT 529
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++N + G +EA ++ EM +G D ++++ +I +A + K LF+
Sbjct: 530 VTYNTLINAFLRR-GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M R G N +I+ L + +V++A+ K M +G P++VT+NSLI LC+A
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYI 349
++++ F ++ GI P T++ + + G V+ LL+ + G P + T+
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 350 MLIK 353
+L++
Sbjct: 709 ILLQ 712
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 162/366 (44%), Gaps = 19/366 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G ++ +I L K + + A +++ M P +T L+ C + V
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM---NGLCKIGRV 338
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFN 176
A + FY + + + F L+ + + DA+ + M + + P + ++N
Sbjct: 339 DAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-DVCTYN 393
Query: 177 IILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ G+ ++G + E V +M +G +V S++ ++ + K + + + ++M
Sbjct: 394 SLIYGYWKEGLVGLALE---VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G++ + +N +I A K + +A+ + + M KG P+V T+NSLI LC+ ++
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIML 351
A +M+ G+ TY+ ++ +R GE E L+ M G TY L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
IK R + ++ ++ +G+ P S LI+ L +G +EEA ++ EM +
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 412 LPEPKT 417
P+ T
Sbjct: 631 TPDIVT 636
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++++I+ L +V + A L+ +M + VT TL+ R + + + +N
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 128 AYKRFKFAVGIE-DFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWC 183
F+ + E + L+ LCR V A L M +D + S NI++NG C
Sbjct: 557 ----FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML--RDGHAPSNISCNILINGLC 610
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G EA EM RG D+V+F+ +I+ +A + L +F +++ GI D
Sbjct: 611 RS-GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+N ++ L KG V DA L+ E G PN T++ L++ + LD R
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 157/369 (42%), Gaps = 10/369 (2%)
Query: 51 FFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI 110
FF W+ KQ GY H Y ++ L + R+ A PSL + I+I
Sbjct: 30 FFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYS---FTIII 86
Query: 111 RRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF 170
+ +C V + GRA + + + +L C V A
Sbjct: 87 QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKTCKP 146
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N ++NG C G A ++ + + D ++S ++ +A L +++
Sbjct: 147 NVATYNTVINGLCKF-GKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+D M + D YNA+ K R V +A+ ++K+M ++G P+VVTYN +I +C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQ 265
Query: 291 AR-KLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTND 346
+ +++EA + F +M+ P TY L I + L + M K G P
Sbjct: 266 YKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGY 325
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI--HALFLNGKLEEAHQYYM 404
Y LI F + R+ + + + N GPD YT LI + +++EA +
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385
Query: 405 EMKEKQLLP 413
MK++++ P
Sbjct: 386 NMKDRRVWP 394
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 11/288 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K K D A L + P T TL + C + AI +
Sbjct: 151 YNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTL---VHGLCQAERLEAAIKVYD 207
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + + C+ + V +A ++ + P + ++N I+NG C
Sbjct: 208 MMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKP-SVVTYNCIINGVCQY 266
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA R++ +M + V++ +I SK + + L LF M + G+ D
Sbjct: 267 KNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYA 326
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--LDEARQAFDE 303
Y+++I+A K R + +A S+++ V P+V Y +LI C+ARK +DEA F
Sbjct: 327 YHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQN 386
Query: 304 MLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTY 348
M R + P + TY+ L + +TG +E + + + M K+ C P T+
Sbjct: 387 MKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 43/234 (18%)
Query: 189 SREAERVWMEMSQRGICY----DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
+REA R + +R +C + SF+ II C+ RN + R M+ +GI D
Sbjct: 60 TREAVRFF----KRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVT 115
Query: 245 VYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN V+ GR+ + I K K PNV TYN++I LCK K+D A F
Sbjct: 116 AYNVVLKGYCDLGRVGRALIKFGKM--GKTCKPNVATYNTVINGLCKFGKIDWAVHLF-- 171
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R H +D P TY L+ + +
Sbjct: 172 ---------TRLPHDLVD---------------------PDGFTYSTLVHGLCQAERLEA 201
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
KV++ + E D +Y A+ +++EA + M ++ P T
Sbjct: 202 AIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVT 255
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 58 QSGYAHSTREYHTMIAILGKVR-KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
Q G S Y+ +I + + + + + A+ L +M G + P+ VT T+++ + + +
Sbjct: 246 QRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSK---I 302
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
++V R + F + + + L+ A + + +
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLD--------------------- 341
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN--LHKVLRLFDQM 234
EA+ + + ++ + DV ++ +IS Y +AR + + L LF M
Sbjct: 342 --------------EAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNM 387
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K + + YN V+ L K +A + + M + +PN +T+ + + K
Sbjct: 388 KDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKT 447
Query: 295 DEARQAFDEMLQRG 308
D+ + F +M+ +G
Sbjct: 448 DKFERIFMDMVYKG 461
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
SFNI++ G + G E +W M + G D +++ ++ + K ++K LR+ +
Sbjct: 61 SFNIMMRGLFDN-GRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+R G D Y+A+I+ L K ++ AIS++ M + G PN YN+LI L A K
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIM 350
++A + F EM SPTI TY+ ++ + E E + L++ M + G P+ TY +
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+K + ++WN++++NG PD + LIH L GK + A Y++M
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWN 299
Query: 411 LLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 300 CAPNLVTQNTLMEGFY 315
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +LNG+ G ++ +W M + G V SF+ ++ + +V +++ M
Sbjct: 28 YNAMLNGFYRA-GRIKDCFELWEMMGREG-NRSVASFNIMMRGLFDNGRVDEVNSIWELM 85
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+ G D Y ++H K + ++ ++++ E KG + Y+++I LCK KL
Sbjct: 86 KKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKL 145
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDTYIML 351
++A + M++ G P Y+A ++ + + + R+MG C PT TY +L
Sbjct: 146 EKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNIL 205
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + +FG + + E+ E G P +Y+ L+ L L K+E A Q + ++ +
Sbjct: 206 INGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGF 265
Query: 412 LPEPKTDELL 421
P+ + L
Sbjct: 266 KPDVQMHNTL 275
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 39/264 (14%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ I+++G+C G ++ RV ++G D ++S +I+ K L K + + +
Sbjct: 96 TYGILVHGFCKN-GYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNG 154
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M + G + + VYNA+I+ L +DAI + + M +P +VTYN LI LCK+ +
Sbjct: 155 MIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSER 214
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV------------------------ 329
EA EML++G++P++ TY + + G ++
Sbjct: 215 FGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNT 274
Query: 330 --------------FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L M C P T L++ F + N +W I +N
Sbjct: 275 LIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNE 334
Query: 376 NGPDRSSYTALIHALFLNGKLEEA 399
PD SY + L ++ +A
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDA 358
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 174 SFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++NI++NG C S R EA + EM ++G+ V+++S ++ + L+L+
Sbjct: 201 TYNILINGLCK---SERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLW 257
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+Q+ + G + D +++N +IH L + A+SL M APN+VT N+L++ K
Sbjct: 258 NQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKD 317
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRK 338
+ A + +L+ + P I +Y+ L + R + + L +++RK
Sbjct: 318 GDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRK 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 39/231 (16%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R++ + + D VYNA+++ + +KD L + M +G +V ++N +++ L
Sbjct: 11 RVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVASFNIMMRGL 69
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTY----HAF---------LDIIRTGEEVFGLLES 335
++DE ++ M + G TY H F L ++ T E G+L++
Sbjct: 70 FDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDA 129
Query: 336 -------------------------MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
M K GC+P Y LI + + +V+ E
Sbjct: 130 FAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFRE 189
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ P +Y LI+ L + + EA+ EM EK L P T LL
Sbjct: 190 MGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLL 240
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
C++ +D A + + +++ +SP Y+A L+ R G ++ F L E M + G +
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVA 60
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
IM+ F R V +W + + G D +Y L+H NG + ++
Sbjct: 61 SFNIMMRGLFDNGR-VDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKS 113
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 151/318 (47%), Gaps = 7/318 (2%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ + ILI C + G AI + + + +L LC+ + +A L
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254
Query: 161 MFC--NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ NK +FP N +FNI++ G C + G +EA V MSQ + D +++ +IS +
Sbjct: 255 LLDMKNKGLFP-NRTTFNILVVGCCRL-GWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K + + +RL ++M+ + + D YN +I+ + ++ L++ ME +G+ PN
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLES 335
VTYN ++K K K+DE + +M + G P I TY+ + + +E F L++
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + G + + T +++ R R+ + G D SY LI F + K
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492
Query: 396 LEEAHQYYMEMKEKQLLP 413
+A + + EMKEK+++P
Sbjct: 493 ASQALRLWDEMKEKEIIP 510
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 20/324 (6%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
++K L I I Y A +A F KR + LL+AL R+ + H
Sbjct: 122 ISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFP----SSHS 177
Query: 161 MFCNKDVFP--------FNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVS 210
+ +K VF NT SFNI+++G C N G EA RV +M G D ++
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFG---EAIRVLGKMRDYGCPPDNIT 234
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ I+ K L++ L MK G+ +R +N ++ + +K+A ++++ M
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGE 327
+ V P+ TYN +I CK ++ EA + +EM +SP + TY+ ++ + E
Sbjct: 295 QNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSE 354
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E F L+E M G +P + TY +++K F + + V K ++ E+G PD +Y LI
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414
Query: 388 HALFLNGKLEEAHQYYMEMKEKQL 411
GK++EA + EM K L
Sbjct: 415 SWHCKVGKMDEAFRLMDEMGRKGL 438
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 41/353 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G ++ Y+ M+ K K D + +M P +VT TL I +C V +
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL---ISWHCKVGKM 423
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
A R + +L ALCR + + +A H + C
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEA-HDLLC---------------- 466
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
S+R +RG D VS+ +I Y K + LRL+D+MK I
Sbjct: 467 --------SAR----------RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEI 508
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
YN++I L + AI + + E G+ P+ +TYN++I C+ ++++A Q
Sbjct: 509 IPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQ 568
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
++M+++ P + T + L + + G E+ L + G +Y +I
Sbjct: 569 FHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLC 628
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ ++FG F + E+ E GPD +Y A++ L G++++A ++ ++ EK
Sbjct: 629 KEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL----FDQMKRMGIECD 242
G +A +++ M + G+ +++ + +++ + + H + RL F ++G++ +
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSI-RLSKAVFTDFIKIGVKIN 196
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+N +IH +AI ++ M + G P+ +TYN+++ LCK +L+EAR
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLL 256
Query: 303 EMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+M +G+ P T++ + R G +E ++E M + P TY ++I F +
Sbjct: 257 DMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG 316
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++ E+ PD +Y LI+ F +G EE + EM+ + + P T
Sbjct: 317 RIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYN 376
Query: 420 LLQDW 424
++ W
Sbjct: 377 VMVKW 381
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG Y+T+I+ KV K D A+ L+DEM G G + TL ++R C
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM--GRKGLKM-DDVTLNTMLRALCRE 455
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ A + + +R + V + L+ +++ A L K++ P + +
Sbjct: 456 RKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP-SIIT 514
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G C + G + +A E+ + G+ D ++++ II Y + + K + ++M
Sbjct: 515 YNSMIAGLCQM-GKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ D N ++ L K +++ A+ L + KG + V+YN++I LCK ++
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL 320
EA +EM ++ + P TY+A L
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAIL 659
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + ++ GY Y T+I K K A L DEM+ E PS++T ++ I
Sbjct: 464 LLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSM---IA 520
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---F 168
C + +AI+ + ++ C+ V+ A F NK V F
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKA--FQFHNKMVEKNF 578
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ + N +L G C G +A +++ +G D VS++ II K + +
Sbjct: 579 KPDVVTCNTLLCGLCKE-GMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637
Query: 229 RLFDQM--KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
L ++M K++G +C YNA++ L +KDA + + EKG + N
Sbjct: 638 DLLEEMEEKKLGPDC--YTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 189/421 (44%), Gaps = 41/421 (9%)
Query: 29 VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALI 88
++ + S+V+S R+D + FF+W K S Y + + ++ ++ + A A+I
Sbjct: 67 MNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI 126
Query: 89 DEMRGGETGPSLVTKQTLLILIRRYC----------------------AVHDVGRAINAF 126
+ S K+ L ++ YC ++ + A+
Sbjct: 127 VALI---KECSRCEKEMLKLM---YCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAY 180
Query: 127 YAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILN 180
Y+R + F VG+ D++ +++ALC+ + AE MF +K + F ++ +L
Sbjct: 181 VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE--MFMSKILKIGFVLDSHIGTSLLL 238
Query: 181 GWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+C + + R+A +V+ MS+ C + VS+S +I + L + L DQM G
Sbjct: 239 GFCRGL-NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ + Y +I AL L+ A +L M +G PNV TY LI LC+ K++EA
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFS 356
+M++ I P++ TY+A ++ + G V F LL M K C+P T+ L++
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
R + + + +NG PD SY LI L G + A++ M + P+
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 417 T 417
T
Sbjct: 478 T 478
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 173/400 (43%), Gaps = 9/400 (2%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
E AF G++ G STR Y +I L D A+ L DEM P++
Sbjct: 282 LEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV---H 337
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFC 163
T +LI C + A + + + + L++ C+ V A E L
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
K N ++FN ++ G C + G +A + M G+ D+VS++ +I + +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRV-GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
++ +L M IE D + A+I+A K A + + M KG++ + VT +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMG 340
LI +CK K +A + +++ I T + + LD++ G +E +L + K+G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P+ TY L+ R F++ + +G P+ YT +I+ L G++EEA
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKA 440
+ M++ + P T ++ N ++R + +++A
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 10/285 (3%)
Query: 119 VGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTK 173
VG+ A + KR + I + L+ LCR ++ A L+ D+ P +
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP-DCL 477
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F I+N +C G + A M ++GI D V+ + +I K L + +
Sbjct: 478 TFTAIINAFCKQ-GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ +M I N ++ L+KG VK+ ++++ + + G+ P+VVTY +L+ L ++
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ + + + M G P + Y ++ + + G EE LL +M+ G P + TY +
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
++K + + + + E G + Y++L+ L+ K
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC--A 115
+G + Y+ +I L + +TA+ L+ M + P +T +I +C
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT---FTAIINAFCKQG 490
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQG--LLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
DV A K + +++ G L+ +C+ +DA ++ + T
Sbjct: 491 KADVASAFLGLMLRK----GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 174 -SFNIILNGW---CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
S N+IL+ C + +E + ++++ G+ VV+++ ++ ++ ++ R
Sbjct: 547 HSLNVILDMLSKGCKV----KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ + MK G + Y +I+ L + V++A L+ +M++ GV+PN VTY ++K
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
KLD A + M++RG R Y + L
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V + I C + + K++ FD+++ + G + Y++++ +LAK L A +
Sbjct: 125 VIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYR 184
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI-------SPTIRTYHAFL 320
ME G ++ Y +++ LCK + A ++L+ G + + + L
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 321 DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
++ R +VF ++ +++ C P + +Y +LI + F + +++ E G P
Sbjct: 245 NL-RDALKVFDVMS--KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+YT LI AL G +++A + EM + P T +L D
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 49 FTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI 108
FF WA Q G+ S ++ M+ GKVR FD AW +ID M+ + +T +T I
Sbjct: 131 LAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVE---ITVETFSI 187
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
L+RRY AI+AF + + F L+S LCR + +A+ KD F
Sbjct: 188 LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKF 247
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ + ++ GWC G+ EAERV+ EM GI +V ++S +I + + +
Sbjct: 248 EPDVIVYTNLVRGWCRA-GNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAH 306
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+F +M G + + YN+++ K + + + M+ G P+ VTYN LI+
Sbjct: 307 DVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETH 366
Query: 289 CK 290
CK
Sbjct: 367 CK 368
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 179 LNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N + G R + W M R + V +FS ++ Y +A + + F++M+
Sbjct: 150 FNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRME 209
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ D+ ++ +I L + R +A S+++K P+V+ Y +L++ C+A +
Sbjct: 210 DYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIS 268
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
EA + F EM GI P + TY +D + R G+ + M GCQP + TY L+
Sbjct: 269 EAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLM 328
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + + V +V+N++ G PD +Y LI
Sbjct: 329 RIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLI 363
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++F+I++ + G + EA + M D ++FS +IS + R + FD
Sbjct: 183 ETFSILMRRYVRA-GLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFD 241
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+K E D VY ++ + + +A + M+ G+ PNV TY+ +I LC+
Sbjct: 242 SLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCG 300
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYI 349
++ A F EML G P TY++ + I ++ G E+V + M+++GC+P TY
Sbjct: 301 QITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYN 360
Query: 350 MLIK 353
LI+
Sbjct: 361 FLIE 364
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
+F+ ++ K R + D MK +E + ++ ++ + L +AI M
Sbjct: 149 AFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRM 208
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL------DII 323
E+ P+ + ++ LI LC+ R+ EA++ FD L+ P + Y + I
Sbjct: 209 EDYNCKPDKIAFSILISILCRKRRASEAQEFFDS-LKDKFEPDVIVYTNLVRGWCRAGNI 267
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E VFG M+ G +P TY ++I R Q V+ E+ + G P+ +Y
Sbjct: 268 SEAERVFG---EMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITY 324
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+L+ G+ E+ Q Y +M K+L EP T
Sbjct: 325 NSLMRIHVKAGRTEKVLQVYNQM--KRLGCEPDT 356
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
+N ++ K R D A D M R + T+ T+ + +R G E M
Sbjct: 150 FNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRME 209
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
C+P + +LI R R+ + ++ + + PD YT L+ G +
Sbjct: 210 DYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKFE-PDVIVYTNLVRGWCRAGNIS 268
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
EA + + EMK + P T ++ D
Sbjct: 269 EAERVFGEMKVAGIKPNVYTYSIVID 294
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + + + GP +V T T IL+ C + F R +
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL LC ++A +++ C +VF S++IIL G C+ S R +
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVF-----SYSIILKGLCDNSMSQRALDL 250
Query: 195 VWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
M + G C +VV+++ +I + K K LF +M R G++ D YN +I AL
Sbjct: 251 FQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K R + A +++ M G P+ VTYN +I +L EA + F +M RG+ P I
Sbjct: 311 CKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNI 370
Query: 314 RTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
++FL + + G +E + +SM G +P +Y L+ ++ F ++ ++N
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ NG D + LIHA G +++A + EM+++ + P+ T
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 172/383 (44%), Gaps = 17/383 (4%)
Query: 40 WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPS 99
+ W A + K +G A R ++ +I K D A + EM+ P
Sbjct: 415 YASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPD 474
Query: 100 LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQ 155
+VT T++ R +GR +A + + A GI+ + ++ C + +
Sbjct: 475 VVTYSTVISAFSR------MGRLTDAMEKFNQM-VARGIQPNTAVYHSIIQGFCMHGGLV 527
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
A+ L+ NK + + FN ++N C G +A ++ ++ G DV++F+
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKD-GRVMDAHDIFDLVTDIGERPDVITFTS 586
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I Y + K ++ D M+ +G+E D Y+ ++ K + D ++L + M+ KG
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVF 330
V PN VTY ++ L +A + AR+ F EM++ G + T+ Y L + +E
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L + + M + + +I + ++ +++ IS +G P+ S+Y +I L
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 391 FLNGKLEEAHQYYMEMKEKQLLP 413
+G +E+A+ + M++ ++P
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVP 789
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 193/471 (40%), Gaps = 83/471 (17%)
Query: 26 GIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
G+K+ S +L + N E A L + G + Y ++ L
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246
Query: 84 AWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A L M GG P++V T+ I + + G+A + F+ R + +
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTV---IHGFFKEGETGKACSLFHEMTRQGVKPDVVTY 303
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC---------------- 183
++ ALC+ + + AE ++ P +T ++N +++G+
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQP-DTVTYNCMIHGYATLGRLKEAAKMFRKMK 362
Query: 184 ------NII------------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
NI+ G S+EA ++ M+ +G D+VS+ ++ Y+
Sbjct: 363 SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFA 422
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
++ LF+ MK GI D +V+N +IHA AK +V DA+ + M+++GV+P+VVTY+++I
Sbjct: 423 DMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL------------------------- 320
+ +L +A + F++M+ RGI P YH+ +
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 321 --DIIRTGEEVFGLLESMRKM------------GCQPTNDTYIMLIKKFSRWRQFGNVFK 366
DI+ + L + R M G +P T+ LI + + FK
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFK 602
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + + G D +Y+ L+ F NG++ + + EM+ K + P T
Sbjct: 603 ILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 14/243 (5%)
Query: 189 SREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV-- 245
+ EA V + MS+ G +V S+S I+ + L LF M + G C V
Sbjct: 208 TEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVA 267
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN VIH K A SL M +GV P+VVTYN +I LCKAR +D+A +M
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 306 QRGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPT---NDTYIMLIKKFSRW 358
G P TY H + + R +E + M+ G P ++++ + K R
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRL-KEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS 386
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
++ +F + ++ G+ PD SY L+H G + + MK + + +
Sbjct: 387 KEAAEIF---DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 419 ELL 421
+L
Sbjct: 444 NIL 446
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 4/212 (1%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T LI YC V + +A A + I + LL + + D L
Sbjct: 583 TFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREM 642
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
K V P NT ++ I+L G G + A + + EM + G V + I+ +
Sbjct: 643 QRKGVKP-NTVTYGIMLAGLFRA-GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + LF ++ M ++ + N +I+A+ K + ++A L ++ G+ PN TY
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
+I L K +++A F M + GI P R
Sbjct: 761 VMIINLLKDGAVEDANNMFSSMEKSGIVPGSR 792
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ IIL G C + EA ++ ++ + + + + +I+ K + + LF +
Sbjct: 689 YGIILGGLCRN-NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G+ + Y +I L K V+DA ++ SME+ G+ P N +I+ L + ++
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807
Query: 295 DEA 297
+A
Sbjct: 808 AKA 810
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 20/301 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTL---LILIRRY 113
K+ G Y+ ++ +GK + + + +EM + VT T+ L+ RR
Sbjct: 861 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR- 919
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK 173
+ +AI+ +Y F+ + LL L + ++DAE+L ++ + K
Sbjct: 920 -----LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF---NEMLEYGCK 971
Query: 174 S----FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +NI+LNG I G++ + ++ +M +GI D+ S++ II KA L+ L
Sbjct: 972 ANCTIYNILLNGH-RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1030
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
F Q+ MG+E D YN +I L K + +++A+SL M++KG+ PN+ TYNSLI L
Sbjct: 1031 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLG 1090
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTND 346
KA K EA + ++E+L +G P + TY+A + + + + + M GC P +
Sbjct: 1091 KAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSS 1150
Query: 347 T 347
T
Sbjct: 1151 T 1151
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 11/287 (3%)
Query: 135 AVGIEDF--QGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC--NIIGSS 189
+ ++DF L+ LC+ K +A L+ K T S+N ++ G N+I
Sbjct: 794 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDI- 852
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
AE ++ EM + G D +++ ++ K+ + ++L++ ++M R G E YN +
Sbjct: 853 --AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 910
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L K R ++ AI L ++ +G +P TY L+ L KA ++++A F+EML+ G
Sbjct: 911 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 970
Query: 310 SPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
Y+ L+ I E+V L + M G P +Y ++I + Q +
Sbjct: 971 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1030
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ E G PD +Y LI L + +LEEA + EM++K ++P
Sbjct: 1031 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 1077
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 158/362 (43%), Gaps = 43/362 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y I +LG+ R+FD A+ ++ EM P ++T +LI+ C D
Sbjct: 304 GVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHT---VLIQVLC---DA 357
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSFNII 178
GR +A + + K K+ Q + + + D F N
Sbjct: 358 GRISDAKDVFWKMK------------------KSDQKPDRVTYITLLDKFADN------- 392
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
G S+ +W M G +VV+++ +I + + + L +FD+MK+ G
Sbjct: 393 --------GESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 444
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I ++ YN++I K DA+ L K M+ G PN T+ I K+ + +A
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAI 504
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKF 355
Q ++ M +GI P + +A L + ++G + ++ MG P TY M+IK
Sbjct: 505 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 564
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
S+ +F K++ ++ EN PD +LI L+ G+ +EA Q + ++KE L P
Sbjct: 565 SKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624
Query: 416 KT 417
T
Sbjct: 625 GT 626
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 18/277 (6%)
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE + + N +F I G + G R A M + GI + +++ ++
Sbjct: 189 AEVFDVMQRQIVKANVGTFAAIFGGL-GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVY 247
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K+ + L ++ M G+ + Y+ ++ A K R V+ + L++ ME GV P
Sbjct: 248 FLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 307
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVF 330
NV +Y I+ L +AR+ DEA + EM G P + T+ + + I ++VF
Sbjct: 308 NVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 367
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M+K +P TYI L+ KF+ + +V ++WN + +G + +YTA+I AL
Sbjct: 368 ---WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDAL 424
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
G++ EA + + EMK+K ++PE +SYN
Sbjct: 425 CQVGRVFEALEMFDEMKQKGIVPE--------QYSYN 453
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR-LFDQMKRMGIECDRKVYNAV 249
EA + + G+ S++ +I C NL + LF +MK +G D YN +
Sbjct: 817 EAHELVKKFKSFGVSLKTGSYNSLI-CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLL 875
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ A+ K +++ + + + M KG VTYN++I L K+R+L++A + ++ +G
Sbjct: 876 LDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGF 935
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SPT TY LD +++ G E+ L M + GC+ Y +L+ R GN K
Sbjct: 936 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH---RIAGNTEK 992
Query: 367 V---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
V + ++ + G PD SYT +I L G+L + Y+ ++ E L P+ T LL D
Sbjct: 993 VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLID 1052
Query: 424 WSYNKQFVERQIASLKAHQ 442
+ +E ++ Q
Sbjct: 1053 GLGKSKRLEEAVSLFNEMQ 1071
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 142/359 (39%), Gaps = 56/359 (15%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL----- 160
L LI+ C A +K F ++ + L+ L + AE L
Sbjct: 802 LCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMK 861
Query: 161 -MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIIS 216
+ C D F ++N++L+ +G S E +V EM ++G V+++ IIS
Sbjct: 862 ELGCGPDEF-----TYNLLLDA----MGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIIS 912
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA-------------- 262
K+R L + + L+ + G Y ++ L K ++DA
Sbjct: 913 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 972
Query: 263 ---------------------ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
L + M ++G+ P++ +Y +I LCKA +L++ F
Sbjct: 973 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1032
Query: 302 DEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++L+ G+ P + TY+ +D + EE L M+K G P TY LI +
Sbjct: 1033 RQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1092
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ K++ E+ G P+ +Y ALI ++G + A+ Y M LP T
Sbjct: 1093 GKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 146/378 (38%), Gaps = 41/378 (10%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+++I L K + D AW + +++ P+ T TLL + R V +V + Y
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY- 651
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNII---- 178
+ + + +L LC+ V DA +++ C D+ +NT + ++
Sbjct: 652 --HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 709
Query: 179 ------------------LNGWCNI------IGSSREAERVWME-MSQRGICYDVVSFSC 213
C I IG +EA + E Q G D S
Sbjct: 710 YNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHS 769
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ K K + + + GI D +I L K + +A L+K + G
Sbjct: 770 LMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 829
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVF 330
V+ +YNSLI L +D A F EM + G P TY+ LD + EE+
Sbjct: 830 VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 889
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ E M + G + T TY +I + R+ ++ + G P +Y L+ L
Sbjct: 890 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 949
Query: 391 FLNGKLEEAHQYYMEMKE 408
G++E+A + EM E
Sbjct: 950 LKAGRIEDAENLFNEMLE 967
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 189/436 (43%), Gaps = 42/436 (9%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFT--FFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+EE G+ + +L ++ E F FF + + + + +I +L +
Sbjct: 171 VEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRG 230
Query: 80 KFDTAWALIDEMRG-GETGPSLVTKQTLL------------------------------- 107
+ + A L+DEM G G P++ T TLL
Sbjct: 231 EVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY 290
Query: 108 -ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCN 164
ILI+ Y + D+ A F + + + + ++S R N++ A L
Sbjct: 291 SILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQ 350
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+D+ P N ++ ++ G C G AE + +EM +G+ ++V F+ + Y + +
Sbjct: 351 RDIVP-NAHTYGALIGGVCKA-GQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKM 408
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ LRL M++ GI D YN + + L K +A ++ SM EKGV PNVVT+
Sbjct: 409 DEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMF 468
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGC 341
I+ CK L EA + F +M ++G P I TY+ +D E+V + M G
Sbjct: 469 IEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGL 528
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY LI + K++NE+ G + ++YT++I L G+ +EA +
Sbjct: 529 LPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFK 588
Query: 402 YYMEMKEKQLLPEPKT 417
Y EM + L+P+ +
Sbjct: 589 LYDEMMKIGLIPDDRV 604
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 150/321 (46%), Gaps = 11/321 (3%)
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIG--S 188
KF + ++ ++ LCR V+ A+ LM K + N ++N +LN + +G
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAY---VGRKD 267
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ + + M + + + V ++S +I YS + ++ + ++F++M+ IE D VY++
Sbjct: 268 RKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSS 327
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I + +K A +L M ++ + PN TY +LI +CKA +++ A EM +G
Sbjct: 328 MISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
Query: 309 ISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
+ + ++ +D R G +E L M K G TY +L + ++
Sbjct: 388 VDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAK 447
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+ N + E G P+ ++T I G L EA + + +M++K +P T L D +
Sbjct: 448 CILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLID-A 506
Query: 426 YNKQFVERQIASLKAHQPQSG 446
Y K+ +Q +K+ G
Sbjct: 507 YCKKEKVKQAHKIKSEMINKG 527
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI+ ++ A+AL DEM + P+ T LI C + A
Sbjct: 325 YSSMISWSRRLGNMKRAFALFDEMSQRDIVPN---AHTYGALIGGVCKAGQMEAAEILLL 381
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC------NKDVFPFNTKSFNIILNG 181
+ + + F + CR + +A L N DVF ++NI+ NG
Sbjct: 382 EMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVF-----TYNILANG 436
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C + EA+ + M ++G+ +VV+F+ I Y K NL + RLF M++ G
Sbjct: 437 LCKL-HRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP 495
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YN +I A K VK A + M KG+ P++ TY+SLI C ++DEA + F
Sbjct: 496 NIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLF 555
Query: 302 DEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+EM +GI+ + TY + + + +E F L + M K+G P + + L+ F +
Sbjct: 556 NEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 14/308 (4%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVR--NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
EMR K I++ + S ++SW R + + AF F Q + Y +I
Sbjct: 312 EMREK----NIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS-QRDIVPNAHTYGALIGG 366
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
+ K + + A L+ EM+ +LV T + YC + A+ ++
Sbjct: 367 VCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM---DGYCRRGKMDEALRLQAIMEKKGI 423
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
+ + L + LC+ +A+ ++ K V P N +F + + +C G+ EA
Sbjct: 424 NADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKP-NVVTFTMFIEIYCKE-GNLAEA 481
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
ER++ +M ++G ++++++ +I Y K + + ++ +M G+ D Y+++IH
Sbjct: 482 ERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
V +A+ L M KG+ NV TY S+I L K + DEA + +DEM++ G+ P
Sbjct: 542 ECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPD 601
Query: 313 IRTYHAFL 320
R + + +
Sbjct: 602 DRVFTSLV 609
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 171/396 (43%), Gaps = 68/396 (17%)
Query: 36 EVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGE 95
EV+ + N+ F F+ ++ + HS Y+ + L K D A + + M+
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDG 133
Query: 96 TGPSLVTKQTLLILIRRYC---AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
P+ + L L+ + +H + Y + V LL+ L +
Sbjct: 134 ISPN---SRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVV-----NSLLNTLVKLD 185
Query: 153 NVQDA-----EHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
V+DA EHL F CN +TK+FNI++ G C + G + +A + MS G
Sbjct: 186 RVEDAMKLFEEHLRFQSCN------DTKTFNILIRGLCGV-GKAEKAVELLGGMSGFGCL 238
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D+V+++ +I + K+ L K +FD +K
Sbjct: 239 PDIVTYNTLIKGFCKSNELKKANEMFDDVK------------------------------ 268
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI--- 322
G +P+VVTY S+I CKA K+ EA D+ML+ GI PT T++ +D
Sbjct: 269 ----SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 323 ---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ T EE+ G M GC P T+ LI + R Q F++W E++ G P+
Sbjct: 325 AGEMHTAEEIRG---KMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPN 381
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+Y+ LI+AL +L +A + ++ K ++P+P
Sbjct: 382 AFTYSILINALCKENRLLKARELLGQLASKDIIPQP 417
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 41/299 (13%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
+ T+ ++ +I L V K + A L+ M G P +VT TL I+ +C +++ +
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTL---IKGFCKSNELKK 259
Query: 122 AINAFYAYKRFK-FAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNII 178
A F K + + + ++S C+ +Q+A L+ ++P N +FN++
Sbjct: 260 ANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNV-TFNVL 318
Query: 179 LNGWCNI----------------------------------IGSSREAERVWMEMSQRGI 204
++G+ +G + R+W EM+ RG+
Sbjct: 319 VDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGM 378
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
+ ++S +I+ K L K L Q+ I +YN VI K V +AI
Sbjct: 379 FPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIV 438
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+++ ME+K P+ +T+ LI C ++ EA F +M+ G SP T + L +
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 15/258 (5%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
++F+ MK GI + ++ ++ + A KG+L L++S E +G + NSL+
Sbjct: 124 QMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCC---MVVNSLLNT 180
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPT 344
L K ++++A + F+E L+ +T++ L + E+ LL M GC P
Sbjct: 181 LVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPD 240
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEI-SENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY LIK F + + ++++++ S +G PD +YT++I GK++EA
Sbjct: 241 IVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLL 300
Query: 404 MEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFL 463
+M + P T +L D Y K ++ G V++ S L
Sbjct: 301 DDMLRLGIYPTNVTFNVLVD-GYAKAGEMHTAEEIRGKMISFGCFPDVVTFTS------L 353
Query: 464 QQPETRRVVRHQGFSFWE 481
R +QGF WE
Sbjct: 354 IDGYCRVGQVNQGFRLWE 371
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G C V S +++ K + ++LF++ R D K +N +I L + A
Sbjct: 169 GCCMVVNS---LLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ L+ M G P++VTYN+LIK CK+ +L +A + FD++
Sbjct: 226 VELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS-------------- 271
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
GC P TY +I + + + + +++ G P +
Sbjct: 272 -----------------GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVT 314
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ L+ G++ A + +M P+ T L D
Sbjct: 315 FNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLID 355
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 158/325 (48%), Gaps = 10/325 (3%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P +V+ T+ I YC ++ + + + + + ++ LC+ V DA
Sbjct: 8 PDVVSYSTV---INGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
E ++ N+ + P +T + +++G+C +G+ + A +++ EM ++ I D ++++ +I
Sbjct: 65 ERVLREMINQGIVP-DTVVYTTLIDGFCK-LGNIQAAYKLFDEMEKQRIVPDFIAYTAVI 122
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + + ++F++M G+E D Y +I K ++ A SL M + G+
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLT 182
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGL 332
PNVVTY +L LCK ++D A + EM +G+ I TY++ ++ + ++G + L
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKL 242
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+E M G P T+ L+ + + + ++ E+ + G P ++ L++ +
Sbjct: 243 MEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCM 302
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT 417
+G LE+ + M EK ++P T
Sbjct: 303 SGMLEDGERLLAWMLEKGIMPNTTT 327
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 34/432 (7%)
Query: 60 GYAHSTREYHTMI---AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G A Y T+I + G+++K LI EM+ P+L T ++++L+ + V
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQK---VLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKV 61
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D R + V + L+ C+ N+Q A L + + P + +
Sbjct: 62 DDAERVLREMINQGIVPDTV---VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP-DFIA 117
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ ++ G C G EA++V+ +M RG+ D V+++ +I Y K+ + K L +QM
Sbjct: 118 YTAVICGLCR-CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ + Y A+ L K V A L+ M KG+ N+ TYNSL+ LCK+ +
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIML 351
+A + +EM G+ P T+ +D +TGE V LL M G QPT T+ +L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 352 IKKF--SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ F S + G W + E G P+ ++Y +L+ + + + Y M +
Sbjct: 297 MNGFCMSGMLEDGERLLAW--MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354
Query: 410 QLLPEPKTDELL-----------QDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQ 458
++P+ T +L + W +K+ E+ +L A S KK +
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGF-NLTASSYNSIIKGFFKKKKISE 413
Query: 459 DREFLQQPETRR 470
RE + E RR
Sbjct: 414 ARELFE--EMRR 423
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 180/389 (46%), Gaps = 26/389 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G T Y T+I K+ A+ L DEM P + ++ C +
Sbjct: 75 GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVI------CGLCRC 128
Query: 120 GRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTK 173
G+ + A + + F+ G+E + L+ C+ ++ A H + P N
Sbjct: 129 GKMMEADKVFNKM-FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVV 186
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ + +G C + G A + EM +G+ ++ +++ +++ K+ N+ + ++L ++
Sbjct: 187 TYTALADGLCKL-GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245
Query: 234 MKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M+ G+ D + ++ A K G +VK A L++ M ++G+ P V+T+N L+ C +
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVK-AHELLREMLDRGLQPTVITFNVLMNGFCMSG 304
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTND 346
L++ + ML++GI P TY++ + + +R E++ + M G P ++
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIY---KGMCARGVMPDSN 361
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +LIK + R + + E++E G SSY ++I F K+ EA + + EM
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421
Query: 407 KEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+ + + + + L D SY + +E +
Sbjct: 422 RREGMAADAEIYNLFVDISYGEGNMETAL 450
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG DVVS+S +I+ Y L KVL+L +M+ G++ + YN++I L K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V DA +++ M +G+ P+ V Y +LI CK + A + FDEM ++ I P Y A
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 319 FL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ + R G+ E + M G +P TY LI + + + F + N++ ++G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
P+ +YTAL L G+++ A++ EM K L
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL 216
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QSG + Y + L K+ + DTA L+ EM G ++ T +L + C
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL---VNGLCKSG 234
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
++ +A+ + F L+ A C+ + A L+ ++ + P +F
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP-TVITF 293
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++NG+C + G + ER+ M ++GI + +++ ++ Y N+ ++ M
Sbjct: 294 NVLMNGFC-MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+ D YN +I K R +K+A L K M EKG +YNS+IK K +K+
Sbjct: 353 ARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI 322
EAR+ F+EM + G++ Y+ F+DI
Sbjct: 413 EARELFEEMRREGMAADAEIYNLFVDI 439
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 12/409 (2%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRND--WEAAFTFFLWAGKQSGYAHSTREY 68
K E+ ++ + G+ S+ + V+ + ND W+ A + F SG + Y
Sbjct: 332 MPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAF-TY 389
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +I L + RK A L ++M P +VT +LL+ YC + A+ +
Sbjct: 390 NILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC---YCVNGCMDEAVKLYTE 446
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIG 187
F + + L+ A L+ ++ N ++N ++NG C ++G
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC-VVG 505
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
E + G ++++ II+ + KA + ++ QM GI + Y
Sbjct: 506 RVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYT 565
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+ I K A+ ++ + KG+ P++ YNSLI C+ + A Q ML+
Sbjct: 566 SFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKD 625
Query: 308 GISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ P I Y++F+ ++ EE E M K G TY LI FS+
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
K+++E+ GN PD ++TAL H L NG +++A + EM + P
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y+++I K +A+A+ +M P++VT + I YC
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSF---IDGYCKTSCC 577
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNII 178
A+ + I + L+ C+ N+ A + L+ KD N +N
Sbjct: 578 DLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G+ N+ EA R + +M + GI D +++ +I +SK N+ L+L+ +M G
Sbjct: 638 ITGYKNL-KMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
D + A+ H L + + DA L+ M + PNV+ YN LI + KL EA
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+ DEML+R I P TY + + G +
Sbjct: 757 RLHDEMLERKIMPDDTTYDILVGMKSLGSD 786
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 156/376 (41%), Gaps = 52/376 (13%)
Query: 81 FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED 140
+D A L DEM E P ++ + I C + D RA+ + F
Sbjct: 193 YDDAVRLFDEMPASEIEPD---QRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFT 249
Query: 141 FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL-----NGWCNIIGSSREAERV 195
F ++ L + +++A H+ KD K +++L +G+C + R+A +
Sbjct: 250 FNSVVDVLVKGGRMEEALHI----KDELLATGKKMSVVLATTLMHGYC-LQREVRKALDI 304
Query: 196 WMEMSQRGICYDVVSFSCII-SCYS-----KARNLHKVLR-------------------- 229
+ E + G+ V+++ +I C KA L + +R
Sbjct: 305 FEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN 364
Query: 230 ---------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
LF +M GI D YN +IH L + R +++A++L + M E GV P +VT
Sbjct: 365 DKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD--IIRTG-EEVFGLLESMR 337
Y+SL+ C +DEA + + EM +G +P + TY + I + ++ + LL M+
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G + TY LI + V ++ G P +Y ++I+ G +
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543
Query: 398 EAHQYYMEMKEKQLLP 413
A Y +M K + P
Sbjct: 544 SAFAVYQQMCAKGIPP 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 151/369 (40%), Gaps = 43/369 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G YH+++ D A L EM G P++VT TL+ + +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM---KGHINKA 470
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD-AEHLMFCNKDVFPFNTKSFN 176
+A K+ + + L++ LC V + E L + F ++N
Sbjct: 471 AFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYN 530
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+NG+ G A V+ +M +GI ++V+++ I Y K L++ + ++
Sbjct: 531 SIINGFIKA-GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC 589
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D YN++I+ + + A+ ++ M + G+ PN+ YNS I + ++E
Sbjct: 590 KGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEE 649
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD----------------------------------- 321
A + +++M++ GI TY +D
Sbjct: 650 ALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTH 709
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G+ + LL+ M ++ +P Y MLI + R + F++ +E+ E P
Sbjct: 710 GLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMP 769
Query: 379 DRSSYTALI 387
D ++Y L+
Sbjct: 770 DDTTYDILV 778
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 39/315 (12%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + F++++ C G +A R++ EM I D S I+ K R+ ++ L
Sbjct: 174 PLDAWMFDVVMRA-CFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ +M+ G +N+V+ L KG +++A+ + + G +VV +L+
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTN 345
C R++ +A F+E L+ G+ PT TY + G E+ + L MR G P+
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352
Query: 346 DTYIMLIKKF---SRWRQFGNVFK-------------------------------VWNEI 371
+ + M+IK W+ ++FK +W ++
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFV 431
+E G P +Y +L+ +NG ++EA + Y EM K P T L NK
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 432 ERQIASLKAHQPQSG 446
++ A L A Q+G
Sbjct: 473 DKAYA-LLAEMKQNG 486
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG+ D S + +++ +++ + L L +M+ G D +++ V+ A K +
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
DA+ L M + P+ + I LCK R + A +M G P T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D++ G EE + + + G + + L+ + R+ ++ E +G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P +YT LI G E+A++ +M++ LLP
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 19/366 (5%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R Y T++ L + +++ A L E+R P+LVT +L + R +GR+
Sbjct: 174 RAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGR------MGRSWPR 227
Query: 126 FYAYKRFKFAVGIE--DFQG--LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNG 181
A A G+E DF +++A CR V +A +D+ + N
Sbjct: 228 IVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFF---EDLKARGHTPCVVTYNA 284
Query: 182 WCNIIGSS---REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G + EA RV EM Q G D V+++ + Y++A + + D M G
Sbjct: 285 LLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + YN V+ A V +A++L M++ G PNV TYN ++ L K +
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVML 404
Query: 299 QAFDEMLQRGISPTIRTYHAFLDII-RTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ EM + G +P T++ L + + G E V +LE M+ G + + DTY LI +
Sbjct: 405 EMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAY 464
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
R N FK++NE++ G P ++Y AL++ L G A +M+ K P
Sbjct: 465 GRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPND 524
Query: 416 KTDELL 421
++ LL
Sbjct: 525 QSYSLL 530
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 18/327 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G S Y+T+IA G+ A+ + +EM P L T LL ++ R
Sbjct: 446 KSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQ--- 502
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQ--DAEHLMFCNKDVFP-FNTK 173
D A + + F + + LL + N+ DA VFP +
Sbjct: 503 GDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVIL 562
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+I N C +G E+ + E+ RG D+V F+ ++S Y+K KV +FD
Sbjct: 563 RTLVIANFKCRRLGG---IEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDS 619
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+K+ G+ D YN+++ AK +A ++ ++ V P+VV+YN++I CK
Sbjct: 620 IKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGL 679
Query: 294 LDEARQAFDEMLQRGISPTIRTYH------AFLDIIRTGEEVFGLLESMRKMGCQPTNDT 347
+ EA++ EM+ G++P + TYH A L++ EV + M + +P T
Sbjct: 680 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREV---INYMIQHNLKPMELT 736
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISEN 374
Y ++ + + ++F +E+SE
Sbjct: 737 YRRVVDSYCKAKRFEEARSFLSEVSET 763
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 40/251 (15%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMK-RMGIECDRKVYNAVIHALAKGRLVKDAISL 265
D + ++ + V L D+M G D + Y V+HAL++ + A+ L
Sbjct: 136 DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVEL 195
Query: 266 MKSMEEKGVAPNVVTYN------------------------------------SLIKPLC 289
+ +GVAP +VTYN ++I C
Sbjct: 196 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACC 255
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTND 346
+ +DEA F+++ RG +P + TY+A L + + G E +L+ M + GCQP
Sbjct: 256 RDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAV 315
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY L ++R + K + ++ G P+ +Y ++ A GK++EA + +M
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 407 KEKQLLPEPKT 417
K+ +P T
Sbjct: 376 KKSGCVPNVNT 386
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 151/376 (40%), Gaps = 18/376 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+ Y+ ++ + GK + A ++ EM P VT L R
Sbjct: 271 KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFY 330
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ + ++ + A + +++A V +A L P N +
Sbjct: 331 EEAAKCLDTMTSKGLLPNAF---TYNTVMTAYGNIGKVDEALALFDQMKKSGCVP-NVNT 386
Query: 175 FNIILNGWCNIIGS-SREAERVWM--EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+N IL ++G SR + M EMS+ G + V+++ +++ K V R+
Sbjct: 387 YNFILG----MLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVL 442
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ MK G+E R YN +I A + +A + M G AP + TYN+L+ L +
Sbjct: 443 EGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQ 502
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
A+ +M +G P ++Y L G + G+ +++ ++++L
Sbjct: 503 GDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVIL 562
Query: 352 ----IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
I F + R+ G + K + E+ G PD + +++ NG + + + +K
Sbjct: 563 RTLVIANF-KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIK 621
Query: 408 EKQLLPEPKTDELLQD 423
+ L P+ T L D
Sbjct: 622 QSGLSPDLITYNSLMD 637
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 38/365 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ G + K D A AL D+M+ P++ T +L ++
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLG---------------- 395
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFP----------------FN 171
K+ +F V +E + + C V L C K +
Sbjct: 396 --KKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELS 453
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++N ++ + GS A +++ EM+ G + +++ +++ S+ + +
Sbjct: 454 RDTYNTLIAAYGRC-GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M+ G + + + Y+ ++ AKG + ++ K + V P+ V +L+ K
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKC 572
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTY 348
R+L +AF E+ RG +P + +++ L + + G +V + +S+++ G P TY
Sbjct: 573 RRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITY 632
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
L+ +++ + K+ N++ + PD SY +I+ G ++EA + EM
Sbjct: 633 NSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 692
Query: 409 KQLLP 413
+ P
Sbjct: 693 DGMAP 697
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 17/366 (4%)
Query: 71 MIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYK 130
+I LG +K D A ++ +R E S++ + ++I V A + +
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWC 183
+ F + + + L++A +DA L+F C + ++N+ILN +
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAV-LVFKKMEEEGCKPTLI-----TYNVILNVYG 263
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ + + M G+ D +++ +ISC + + ++F++MK G D+
Sbjct: 264 KMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDK 323
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N ++ K R K+A+ ++K ME G +P++VTYNSLI + L EA + D+
Sbjct: 324 VTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQ 383
Query: 304 MLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M+++GI P + TY L E + MR GC+P T+ LIK +
Sbjct: 384 MVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGR 443
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DE 419
F + KV+ EI PD ++ L+ NG E + EMK +PE T +
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 503
Query: 420 LLQDWS 425
L+ +S
Sbjct: 504 LISAYS 509
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 180/429 (41%), Gaps = 73/429 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI------LI 110
K SG++ ++T++ + GK R+ A ++ EM PS+VT +L+ L+
Sbjct: 315 KLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLL 374
Query: 111 RRYCAVHD--VGRAINA-FYAYKRFKFA---VGIED-----FQGLLSALCRYKNVQDAEH 159
R + D V + I + Y G+++ F + +A C+ N+
Sbjct: 375 REAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCK-PNICTFNA 433
Query: 160 L--MFCNKDVFPFNTKSFNII--------LNGWCNII------GSSREAERVWMEMSQRG 203
L M N+ F K F I + W ++ G E V+ EM + G
Sbjct: 434 LIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 493
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ +F+ +IS YS+ + + + ++ +M G+ D YNAV+ ALA+G L + +
Sbjct: 494 FVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSE 553
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD---------------------------- 295
+ M++ PN +TY SL+ +++++
Sbjct: 554 KVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVN 613
Query: 296 -------EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTN 345
E AF+E+ ++G SP + T +A + I + V +L M + G P+
Sbjct: 614 SKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSL 672
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY L+ SR F +V EI G PD SY +I A NG++++A + +
Sbjct: 673 ATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSY 732
Query: 406 MKEKQLLPE 414
MK L+P+
Sbjct: 733 MKTYGLVPD 741
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 173/404 (42%), Gaps = 28/404 (6%)
Query: 21 KIEECGIK---VSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
K+EE G K ++ ++ V + W + + + K SG A Y+T+I+ +
Sbjct: 242 KMEEEGCKPTLITYNVILNVYGKMGMPW-SKISGLVHGMKSSGVAPDDYTYNTLISCCRR 300
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
++ A + +EM+ P VT TLL + Y A+ + F+
Sbjct: 301 GSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDV---YGKSRRPKEAMEVLKEMEFSGFSPS 357
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I + L+SA R +++A L K + P + ++ +L+G+ G A R+
Sbjct: 358 IVTYNSLISAYARDGLLREAMELKDQMVEKGIKP-DVFTYTTLLSGF-EKAGMDEPAMRI 415
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM G ++ +F+ +I + +++++F++++ D +N ++ +
Sbjct: 416 FGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQ 475
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ + + K M+ G P T+N+LI + +A + ML+ G++P + +
Sbjct: 476 NGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535
Query: 316 YHAFLDIIRTG------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
Y+A L + G E+VF ++ R C+P TY L+ ++ ++ + +
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGR---CKPNELTYCSLLHAYANSKEIERMHTLAE 592
Query: 370 EISENGNGPDRSSYTALIHALFL-NGK---LEEAHQYYMEMKEK 409
EI P L+ L L N K L E + E+K+K
Sbjct: 593 EIYSGLTEP----VPVLLKTLVLVNSKCDLLMETEHAFEELKKK 632
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 139/310 (44%), Gaps = 19/310 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G+ ++T+I+ + F A A+ M P L + +L + R
Sbjct: 490 KRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLW 549
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
++ F K + + LL A Y N ++ E + ++++ T+
Sbjct: 550 E---QSEKVFAEMKDGRCKPNELTYCSLLHA---YANSKEIERMHTLAEEIYSGLTEPVP 603
Query: 177 IIL------NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
++L N C+++ E E + E+ ++G D+ + + +I+ Y + + + K +
Sbjct: 604 VLLKTLVLVNSKCDLL---METEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEI 659
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ M G YN++++ ++ + + ++K + KG+ P++++YN++I C+
Sbjct: 660 LNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCR 719
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDT 347
++ +A + F M G+ P + TY+ F+ E+ G++ M K GC+ +T
Sbjct: 720 NGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNT 779
Query: 348 YIMLIKKFSR 357
Y ++ + +
Sbjct: 780 YNSIVDGYCK 789
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +++ ++ + L +E+ G T P V +TL +L+ C + + +AF
Sbjct: 571 YCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTL-VLVNSKCDL--LMETEHAFE 627
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNII 186
K+ K + + +++ R + V A E L F N+ F + ++N ++
Sbjct: 628 ELKK-KGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSE 686
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
R +E V E+ +G+ D++S++ +I Y + + R+F MK G+ D Y
Sbjct: 687 NFER-SEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITY 745
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK-ARKLD 295
N + + A L +DAI +++ M + G N TYNS++ CK +R+ D
Sbjct: 746 NTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRAD 795
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P L T ++ + R V +N F+ + + L+ R +N + +
Sbjct: 635 PDLSTLNAMIAIYGRRQMVAKANEILNFM---NESGFSPSLATYNSLMYMHSRSENFERS 691
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
E ++ K + P + S+N ++ +C G ++A R++ M G+ DV++++ +
Sbjct: 692 EEVLKEILAKGLKP-DLISYNTVIFAYCRN-GRMKDASRIFSYMKTYGLVPDVITYNTFV 749
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ Y+ + + M + G + ++ YN+++ K DAI + S+ +
Sbjct: 750 ASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQ 805
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 193/447 (43%), Gaps = 33/447 (7%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
KV++ S L V +E AF L + G+ T Y +I L + +K + ++ L
Sbjct: 417 KVNTANFSRCLCGV-GKFEKAFQI-LKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLL 474
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
EM+ P + T ILI +C + +A + F + + + + LL A
Sbjct: 475 FQEMKRAGVNPDVYTYT---ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN-------------IIGSSREA 192
+ K + A + + +P N +++ +++G C +IG+S
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYP-NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNV 590
Query: 193 ER-VWMEMSQR-GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
E + E + I +VV++ +I KA+ + L D M G E ++ VY+A+I
Sbjct: 591 ESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALI 650
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
K + +A + M + G P+V TY SLI + K +LD A + EML +
Sbjct: 651 DGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCN 710
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + TY A +D + + G E+ LL M + GC P TY LI + + K+
Sbjct: 711 PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKL 770
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
+ +++ G P+ +Y LI+ G L+EAH EMK PK LQ +
Sbjct: 771 FKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHW---PKH---LQGYHCA 824
Query: 428 KQ-FVERQIASLKAHQPQSGQNTRVIS 453
Q F ++ IASL + T I+
Sbjct: 825 VQGFSKKFIASLGLLEEMESHETVPIA 851
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 153/353 (43%), Gaps = 50/353 (14%)
Query: 110 IRRYCAVHD--VGRAINA-----FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM- 161
I++ C V++ +G + N F A + + L+ LC+ + V DA L+
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632
Query: 162 -FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
P N ++ +++G+C I G A+ V++ M++ G V +++ +I K
Sbjct: 633 AMLAAGCEP-NQIVYDALIDGFCKI-GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
L +++ +M + Y A+I L+K ++ A++L+ MEEKG +PNVVT
Sbjct: 691 DGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVT 750
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY----------------HAFLDIIR 324
Y +LI L K K D + + F +M +G +P TY H LD ++
Sbjct: 751 YTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Query: 325 TGE--------------------EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GLLE M P Y MLI FS+ +
Sbjct: 811 HTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870
Query: 365 FKVWNEISENGNGPDRSS---YTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ E+ E + + +S Y +LI AL L ++EEA Y EM K ++P+
Sbjct: 871 LELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 163/416 (39%), Gaps = 75/416 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y T+++ K ++F +I+ M G PSL L+ YC D A
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS-----LVHGYCNAGDYAYAYKL 363
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---------MFCNKDVF-PFNTKSF 175
F G + + ++C + + +AE L M V NT +F
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ L G +G +A ++ EM ++G D +++ +I+ +A+ + K LF +MK
Sbjct: 424 SRCLCG----VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R G+ D Y +I + K L++ A S M G +PNVVTY +L+ K+++L
Sbjct: 480 RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLI 539
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD---------------------------------- 321
+A F M+ P TY A +D
Sbjct: 540 QAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGN 599
Query: 322 --------IIRTGEEVFGL------------LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
++ G + GL L++M GC+P Y LI F + +
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
N +V+ +++ G P +YT+LI +F +G+L+ A + EM P T
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 173/434 (39%), Gaps = 55/434 (12%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E FFLWA +Q GY+H+ Y + ILG TA L+ E+ GE V ++
Sbjct: 115 ELCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREI--GEDDRE-VLRRL 171
Query: 106 LLILIRRYC-------AVHDVGRAINAFYAYKRFKFAVGIEDFQG--------------- 143
L +L+RR C A+ ++GR + Y + ++
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231
Query: 144 -------------LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSS- 189
ALC+ DA +++ K+ F +T +++G ++ +S
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNML--EKEDFNLDTVLCTQMISG---LMEASL 286
Query: 190 -REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EA M +VV++ ++S + K + R+ + M G + ++N+
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC------KARKLDEARQAFD 302
++H A L M G P V YN I +C A LD + ++
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406
Query: 303 EMLQRG-ISPTIRTYHAFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
EML + + T + + G E+ F +L+ M + G P TY +I + +
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-D 418
+ F ++ E+ G PD +YT LI + G +E+A ++ EM+ P T
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 419 ELLQDWSYNKQFVE 432
LL + +KQ ++
Sbjct: 527 ALLHAYLKSKQLIQ 540
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 12/264 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ GY S Y ++I + K + D A ++ EM P++VT ++ + + V
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSK---VG 727
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSF 175
++ +A+N + + + + L+ L + DA +F N N ++
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA-DASLKLFKQMNSKGCAPNYVTY 786
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++N C G EA + EM + + C + +SK L L ++M+
Sbjct: 787 RVLINHCC-AAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEME 843
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT---YNSLIKPLCKAR 292
VY +I + +K ++ A+ L K + E + N+ + Y SLI+ LC A
Sbjct: 844 SHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLAS 903
Query: 293 KLDEARQAFDEMLQRGISPTIRTY 316
+++EA + EM ++GI P + +
Sbjct: 904 QVEEAFTLYTEMTRKGIVPDLIVF 927
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 181/430 (42%), Gaps = 63/430 (14%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D A FF W + + HS +H+++ +L + R A + + M T P T
Sbjct: 65 DPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDAT- 123
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-----E 158
LL L+RR + A A + F + + + LL L R+ V + E
Sbjct: 124 -FLLNLLRR------MNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKE 176
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCN-----------------------------IIGSS 189
L VFP N + N +LN +C ++G
Sbjct: 177 MLTDNGNSVFP-NLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYC 235
Query: 190 R--EAER---VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
R + ER V+ M +R + VS++ +I +A LH+ L + +M+ G +
Sbjct: 236 RNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVR 291
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y ++ AL + +A+SL M E+G PNV TY LI LCK ++DEA + +EM
Sbjct: 292 TYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEM 351
Query: 305 LQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+++G++P++ ++A + + G E+ G+L M P TY LI F R +
Sbjct: 352 VEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSM 411
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ N++ E+ PD +Y LIH L G ++ A + + M P+
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPD------- 464
Query: 422 QDWSYNKQFV 431
W++N V
Sbjct: 465 -QWTFNAFMV 473
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 173/366 (47%), Gaps = 13/366 (3%)
Query: 54 WA-GKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
WA ++ G + R Y ++ L + + A +L EMR P++ T +LI
Sbjct: 278 WARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT---VLIDY 334
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPF 170
C + A+ A + F L+ + C+ ++DA ++ +K V P
Sbjct: 335 LCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCP- 393
Query: 171 NTKSFNIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
N +++N ++ G+C G S + A + +M + + DVV+++ +I + + R
Sbjct: 394 NVRTYNELICGFCR--GKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF M R G D+ +NA + L + V +A +++S++EK V N Y +LI C
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTND 346
KA K++ A F ML P T++ +D +R ++ L+E M K +PT
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +L+++ + F ++ N + +G P+ +YTA I A G+LEEA + +++
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631
Query: 407 KEKQLL 412
K + +L
Sbjct: 632 KNEGVL 637
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 156/337 (46%), Gaps = 20/337 (5%)
Query: 95 ETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNV 154
E GP L T +L++ YC DV RA F R + AV + L+ LC +
Sbjct: 219 EPGPDLFTYTSLVL---GYCRNDDVERACGVFCVMPR-RNAV---SYTNLIHGLCEAGKL 271
Query: 155 QDA-EHLMFCNKD-VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+A E +D FP +++ +++ C G EA ++ EM +RG +V +++
Sbjct: 272 HEALEFWARMREDGCFP-TVRTYTVLVCALCES-GRELEALSLFGEMRERGCEPNVYTYT 329
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I K + + L++ ++M G+ +NA+I + K +++DA+ ++ ME K
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL------DIIRTG 326
V PNV TYN LI C+ + +D A ++M++ +SP + TY+ + ++ +
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
+F L M + G P T+ + R + G ++ + E + +YTAL
Sbjct: 450 SRLFRL---MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
I GK+E A + M ++ LP T ++ D
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 129/331 (38%), Gaps = 39/331 (11%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
LI YC + A + F + F ++ L + VQDA M +D+
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA---MLLVEDMA 562
Query: 169 PFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
F+ K ++NI++ R A + + G +VV+++ I Y L
Sbjct: 563 KFDVKPTLHTYNILVEEVLKEYDFDR-ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+ + ++K G+ D +YN +I+A L+ A +++ M G P+ +TY+ L
Sbjct: 622 EEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV----------FG--- 331
+K L ++ + G +P LD+ T V FG
Sbjct: 682 MKHL-----------VIEKHKKEGSNP------VGLDVSLTNISVDNTDIWSKIDFGITT 724
Query: 332 -LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L E M + GC P +TY LI + + F +++ + E G P + +L+ +
Sbjct: 725 VLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSC 784
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G EA M E L ++ +LL
Sbjct: 785 CKLGMFGEAVTLLDSMMECSHLAHLESYKLL 815
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ +M++ G ++ ++S +I+ K L+ L+ M+ GI ++N+++ +
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + +A++L+ SM E ++ +Y LI L + ++A F +L+ G +
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845
Query: 315 TYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ +D + +TG ++ LL M K GC+ +TY ML+++ +R
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N SFNI++ G G +A +W M+Q G D ++ ++ + K ++K LR+
Sbjct: 58 NVVSFNIMMRGLFGN-GDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ + G D Y+A+I+ L K + +A+S++ M + G PN YN+LI
Sbjct: 117 LEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMG 176
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
K D+A + F EM SPT+ TY+ ++ + GE E + L++ M + G +P T
Sbjct: 177 VSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+K + + ++WN++ NG PD LIH L GK + A Y +M
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMN 296
Query: 408 EKQLLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 297 RWNCAPNLVTHNTLMEGFY 315
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 12/346 (3%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+++ W E+ G E ++V+ I++R DV +AI+ + + F
Sbjct: 39 GRIKDCIELW----ELMGREXSQNVVSFN---IMMRGLFGNGDVDKAISIWELMTQSGFV 91
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ L+ C+ + + ++ + + +++ ++NG C EA
Sbjct: 92 EDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKE-AKLDEAVS 150
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V M + G + ++ +I+ + +R+F +M YN +I+ L
Sbjct: 151 VLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLC 210
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
KG +A L+K M EKG P V+TY+ L+K LC+ K++ A Q +++++ G+ P ++
Sbjct: 211 KGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQ 270
Query: 315 TYHAFL-DIIRTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ + + G+ L+ M + C P T+ L++ F + N +W I
Sbjct: 271 MLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARI 330
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
NG PD SY + L ++ A + + K++ P T
Sbjct: 331 LRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G Y MI L K K D A ++++ M P+ TL I + V
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTL---INGFMGV 177
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK--- 173
AI F + + + L++ LC+ + +A L+ K++ K
Sbjct: 178 SKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLV---KEMLEKGWKPCV 234
Query: 174 -SFNIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
++++++ G C G E A ++W ++ G+ DV + +I L L+
Sbjct: 235 ITYSLLMKGLCQ--GHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLY 292
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
M R + +N ++ K +++A+ + + G+ P++V+YN +K LC
Sbjct: 293 FDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSC 352
Query: 292 RKLDEARQAFDEMLQRGISPTIRT 315
++ A + L + I+P+I T
Sbjct: 353 SRISFAILFLQDALAKKIAPSIIT 376
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 185/435 (42%), Gaps = 46/435 (10%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
VR + E A + G + Y ++IA+L + A ++++M
Sbjct: 299 VRGELENAVKLLDEMAAK-GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDA 357
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V T+ I +C+ D+ A F ++ A L++ LCR +++A+ +
Sbjct: 358 VVFTTV---ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ +K + + ++ ++++G+C G+ EA RV EM R + +VV+++ +
Sbjct: 415 LQEMVDKGL-DVDVVTYTVLIDGYCK-RGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
K ++ L +M G+E + YN++I+ L K ++ A+ +M ME G +V
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLE- 334
TY +LI LCK+ + D A EML +GI P+I TY+ ++ V G LLE
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592
Query: 335 --------------SMRKMGC--------------------QPTNDTYIMLIKKFSRWRQ 360
S+ K C P +TY +LIK + R
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
E+ E G SSY+ALI L K EA ++ +M+ + L EP
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712
Query: 421 LQDWSYNKQFVERQI 435
D S+N+ +E I
Sbjct: 713 YMDISFNEDNLESTI 727
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N S NI+L + G ++A + + EMS DVV++ ++ Y L ++L
Sbjct: 254 NVCSHNILLKALLSA-GRLKDACQHFDEMSSPP---DVVTYGTMVHGYCVRGELENAVKL 309
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D+M G+E + VY +VI L V DA+ +++ M GVA + V + ++I C
Sbjct: 310 LDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCS 369
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDT 347
L AR+ F+EM +RG++ T+ A ++ + R GE E +L+ M G T
Sbjct: 370 KGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVT 429
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +LI + + F+V NE+ P+ +YTAL L G + A++ EM
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 408 EKQL 411
K L
Sbjct: 490 NKGL 493
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 18/267 (6%)
Query: 144 LLSALCRYKNVQDAEHLMF---------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL LC K V++A L+ C +V +NT I++G C R AE
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT-----IIDGLCKAQAVDR-AEG 220
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V M +G+ DVV++S II KA+ + + + M G++ D YN +I L
Sbjct: 221 VLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 280
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
K + V A +++ M +KGV P+VVTYN++I LCKA+ +D A M+ + + P I+
Sbjct: 281 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQ 340
Query: 315 TYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
TY+ + + TGE EV LE M G P TY +L+ + + K++ +
Sbjct: 341 TYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCM 400
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEE 398
G P+ + Y L+H G + +
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIAD 427
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 189/456 (41%), Gaps = 83/456 (18%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+I L K + D A ++ M P +VT T+ I C V RA
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI---IDGLCKAQAVDRAEGVLQ 293
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + ++ LC+ + V A+ ++ +KDV P + +++N +++G+ +
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP-DIQTYNCLIHGYLST 352
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIIS-------CYSKARNLHKVLR--------- 229
G +E R EM RG+ DVV++S ++ C + + ++R
Sbjct: 353 -GEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411
Query: 230 -------------------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
L D M GI + ++N V+ A AK ++ +A+ + M
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT----- 325
+ G++P+VVTY LI LCK ++D+A F++M+ G++P +++ + + T
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531
Query: 326 -GEEVF--------------------------------GLLESMRKMGCQPTNDTYIMLI 352
EE+F L++SM ++G +P +Y LI
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLI 591
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++ + + G PD SY L+ G+++ A+ + EM K +
Sbjct: 592 GGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVT 651
Query: 413 PEPKT-DELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
P T +LQ + ++F E + L + +SGQ
Sbjct: 652 PGAVTYSTILQGLFHTRRFSEAK--ELYLNMIKSGQ 685
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 11/306 (3%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFN 176
+ A++ F + + + + L+ ALC+ V DA + N V P N+ FN
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP-NSVVFN 518
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + +AE ++ EM +G+ +VV F+ I+ + RL D M+R
Sbjct: 519 SLVYGLCTV-DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMER 577
Query: 237 MGIECDRKVYNAVI--HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+G+ + YN +I H LA GR +A L+ M G+ P++++Y++L++ CK ++
Sbjct: 578 VGVRPNVISYNTLIGGHCLA-GR-TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
D A F EML++G++P TY L + R E L +M K G Q TY ++
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + FK++ + P+ ++T +I LF G+ ++A + + L
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755
Query: 412 LPEPKT 417
+P T
Sbjct: 756 VPNVVT 761
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 6/260 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N N +LNG C+ + + M + G +VVS + ++ + + + L L
Sbjct: 124 NEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL 183
Query: 231 FDQM-KRMGIECDRKV--YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
M + G C V YN +I L K + V A +++ M +KGV +VVTY+++I
Sbjct: 184 LHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDG 243
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPT 344
LCKA+ +D A M+ +G+ P + TY+ +D + + V G+L+ M G +P
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +I + + V + + PD +Y LIH G+ +E +
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363
Query: 405 EMKEKQLLPEPKTDELLQDW 424
EM + L P+ T LL D+
Sbjct: 364 EMYARGLDPDVVTYSLLLDY 383
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 158/371 (42%), Gaps = 14/371 (3%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + Y +I L K+ + D A ++M P+ V +L + C V
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL---VYGLCTVD 528
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
+A F+ + F ++ LC V A+ L+ + V N S+N
Sbjct: 529 RWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYN 588
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + G + EA ++ M G+ D++S+ ++ Y K + LF +M R
Sbjct: 589 TLIGGHC-LAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR 647
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ Y+ ++ L R +A L +M + G ++ TYN ++ LCK +DE
Sbjct: 648 KGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + F + + + P I T+ +D++ G ++ L S+ G P TY +++K
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767
Query: 354 KFSR---WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ +F N+F + ++G PD A+I +L G++ A Y ++ E
Sbjct: 768 NIIQEGLLDEFDNLFLA---MEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824
Query: 411 LLPEPKTDELL 421
E T LL
Sbjct: 825 FSLEASTTSLL 835
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 186/472 (39%), Gaps = 87/472 (18%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV--- 116
G Y+T+I L K + D A ++ M + P + QT LI Y +
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDI---QTYNCLIHGYLSTGEW 355
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKS 174
+V R + YA + + LL LC+ +A + +C K + P N
Sbjct: 356 KEVVRRLEEMYARG---LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP-NVTI 411
Query: 175 FNIILNGWC---------------------------NIIGSS-------REAERVWMEMS 200
+ I+L+G+ NI+ + EA ++ MS
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA------ 254
Q G+ DVV++ +I K + + F+QM G+ + V+N++++ L
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531
Query: 255 ------------------------------KGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
+G+ V A L+ SME GV PNV++YN+L
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ-VMVAQRLIDSMERVGVRPNVISYNTL 590
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGC 341
I C A + DEA Q D M+ G+ P + +Y L +TG + + L M + G
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P TY +++ R+F +++ + ++G D +Y +++ L ++EA +
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710
Query: 402 YYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
+ + K L P T ++ D + K ++ L A P G V++
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLF-KGGRKKDAMDLFASIPSHGLVPNVVT 761
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 16/285 (5%)
Query: 169 PFNTKSFNIILN----GWCNIIGSSREAERVWMEMSQ---RGICYDVVSFSCIISCYSKA 221
P + ++FN +LN C+ +S A ++ M++ + D+ ++S + C+ +
Sbjct: 46 PASVRAFNHLLNVVARARCS--STSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRL 103
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKSMEEKGVAPNVVT 280
+ F + + G + V N +++ L + V +A+ L++ M E G PNVV+
Sbjct: 104 GRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVS 163
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRG---ISPTIRTYHAFLDIIRTGEEVF---GLLE 334
N+L+K LC ++++EA + M + G +P + TY+ +D + + V G+L+
Sbjct: 164 CNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQ 223
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G + TY +I + + V + + G PD +Y +I L
Sbjct: 224 HMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 283
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
++ A M +K + P+ T + D Q V+R L+
Sbjct: 284 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 156/363 (42%), Gaps = 16/363 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
G ++ +++++ L V +++ A L EM P++V T++ + V
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
R I++ +R + + L+ C +A L+ V + S++
Sbjct: 567 VAQRLIDSM---ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYD 623
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+L G+C G A ++ EM ++G+ V++S I+ R + L+ M +
Sbjct: 624 TLLRGYCKT-GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D YN +++ L K V +A + +S+ K + PN++T+ +I L K + +
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742
Query: 297 ARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A F + G+ P + TY + +II+ G +E L +M K GC P + +ML
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDS---VMLNA 799
Query: 354 KFSRWRQFGNVFKVWNEIS--ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
G + + +S + N +S T+L+ +LF EE + + EK L
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLF---SREEYKNHAKSLPEKYL 856
Query: 412 LPE 414
E
Sbjct: 857 FLE 859
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 10/284 (3%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSREAE 193
+ + LL C K ++A L+ D P N S+ I++NG+ G +A
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTE-GQVDKAY 223
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA- 252
+++EM RGI +VV+++ +I KA+ + + +F QM G++ D YN +IH
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L+ G+ K+ + +++ M G+ P+ TY SL+ LC + EAR FD M+++GI P
Sbjct: 284 LSIGKW-KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPN 342
Query: 313 IRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ Y + T E+ LL M + G P + + ++ +++ ++N
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + G PD +Y ALI AL G++++A + +M + + P
Sbjct: 403 KMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 162/373 (43%), Gaps = 11/373 (2%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+ A+ FL G + Y T+I L K + D A + +M P T
Sbjct: 220 DKAYNLFLEM-MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD---NDT 275
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
LI Y ++ + + LL+ LC ++A L
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
K + P N + I+++G+ G+ E + M + G+ D F+ I + Y+K
Sbjct: 336 RKGIKP-NVAIYGILIHGYATK-GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + + +F++MK+ G+ D Y A+I AL K V DA+ M +GVAPN+ +NS
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMG 340
L+ LC K ++A++ + EML +GI P + ++ L + T +V L++ M ++G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P +Y LI + K + + G PD +Y L+H G++++A+
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 401 QYYMEMKEKQLLP 413
+ EM + P
Sbjct: 574 GVFREMLRNGITP 586
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 33/403 (8%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWA-GKQSGYAHSTREYHTMIAILGKVRKFDTA 84
G+ + +L +L+ R AF L A + SG ST E ++++ ++ + T
Sbjct: 29 GLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTI 88
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
D T ILI +C + + F + + V L
Sbjct: 89 KVTPDPC-------------TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQL 135
Query: 145 LSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
L LC K + +A ++ C DV +NT +L G+CN + E + M
Sbjct: 136 LKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNT-----LLKGFCNEKRAEEALELLHM 190
Query: 198 EMSQRG--ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+G +VVS++ +I+ + + K LF +M GI+ + Y VI L K
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
++V A + + M +KGV P+ TYN LI K E + +EM G+ P T
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 316 YHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
Y + L+ + R E F L +SM + G +P Y +LI ++ + + N +
Sbjct: 311 YGSLLNYLCNNGRCREARF-LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
ENG PD + + A ++EA + +MK++ L P+
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 18/357 (5%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
I+ Y + A++ F K+ + + ++ L+ ALC+ V DA +M
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM-- 440
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
N+ V P N FN ++ G C + +A+ + EM +GI DVV F+ I+
Sbjct: 441 NEGVAP-NIFVFNSLVYGLCTV-DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVI--HALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
+ K RL D M+R+G Y +I H L GR+ + A SL M G+ P+ TY
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV-GRIDEAAKSL-DVMLSVGLKPDEWTY 556
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRK 338
N+L+ C+A ++D+A F EML+ GI+P + TY L R E L +M
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
G Q Y +++ S+ FK++ + + +++ +I ALF +G+ E+
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676
Query: 399 AHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ--NTRVIS 453
A + + L+P+ T L+ + + ++E + L + +SG N+R+++
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE-EFDDLFSAMEKSGTTPNSRMLN 732
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 157/404 (38%), Gaps = 45/404 (11%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G + ++ + K D A + ++M+ P +V L I C +
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL---IDALCKLG 427
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSF 175
V A+ F A I F L+ LC + A+ F N+ + P + F
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP-DVVFF 486
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N IL C G +A+R+ M + G V+S++ +I + + + + D M
Sbjct: 487 NTILCNLCTK-GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML 545
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G++ D YN ++H + + DA + + M G+ P VVTY++++ L R+
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA++ + M+ G I Y+ L+ + +E F L +S+ Q T+ ++I
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665
Query: 353 KK-------------FSRWRQFGNVFKVWNE--ISEN--------------------GNG 377
F+ +G V V+ I+EN G
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P+ AL+ L G + A Y ++ EK E T +L
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAML 769
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
+ WE A F+ Q G ++T++ L + A LID M T P +++
Sbjct: 462 DKWEKAKEFYFEMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVIS 520
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAE 158
TL I +C V + A + +VG++ + LL CR + DA
Sbjct: 521 YTTL---IGGHCLVGRIDEAAKSL----DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCI 214
+ + P +++ IL+G + + R EA+ +++ M G +++ ++ I
Sbjct: 574 GVFREMLRNGITP-GVVTYSTILHG---LFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
++ SK + + +LF + + + +N +I AL K +DA+ L ++ G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-------DIIRTGE 327
P+V TY + + L + L+E F M + G +P R +A + DI R G
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ L E + T MLI SR
Sbjct: 750 YLCKLDEKNFSLEASTT----AMLISLLSR 775
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK--GRLVKDA-----ISLMKSMEE 271
S + L L+LFD + +N ++ A+++ GR +SL M
Sbjct: 25 SGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84
Query: 272 K---GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTI--RTYHAFLDIIR 324
+ V P+ TY+ LI C+ +L+ F +L+ G ++ + + D R
Sbjct: 85 ECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKR 144
Query: 325 TGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN---GPDRS 381
E + L++ M ++GC P +Y L+K F ++ ++ + ++++ P+
Sbjct: 145 LCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVV 204
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
SY +I+ F G++++A+ ++EM ++ + P T + D Q V+R
Sbjct: 205 SYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N SFNI++ G G +A +W M+Q G D ++ ++ + K ++K LR+
Sbjct: 58 NVVSFNIMMRGLFGN-GDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ G D Y+A+I+ L K + +A+S++ M + G PN YN+LI
Sbjct: 117 LGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVG 176
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
K D+A + F EM SPT+ TY+ ++ + GE E + L++ M + G +P T
Sbjct: 177 VSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y +L+K + + ++WN++ NG PD LIH L GK + A Y +M
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMN 296
Query: 408 EKQLLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 297 RWNCAPNLVTHNTLMEGFY 315
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 12/342 (3%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+++ W E+ G E ++V+ I++R DV +AI+ + + F
Sbjct: 39 GRIKDCIELW----ELMGREDSQNVVSFN---IMMRGLFGNGDVDKAISIWELMTQSGFV 91
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ L+ C+ + + ++ + + +++ ++NG C EA
Sbjct: 92 EDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKE-AKLDEAVS 150
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V M + G + ++ +I+ + +R+F +M YN +I+ L
Sbjct: 151 VLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLC 210
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
KG +A L+K M EKG P V+TY+ L+K LC+ K++ A Q +++++ G+ P ++
Sbjct: 211 KGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQ 270
Query: 315 TYHAFL-DIIRTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+ + + G+ L+ M + C P T+ L++ F + N +W I
Sbjct: 271 MLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARI 330
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
NG PD SY + L ++ A + + K++ P
Sbjct: 331 LRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAP 372
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 13/265 (4%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
L ++ G Y MI L K K D A ++++ M P+ TL I
Sbjct: 117 LGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTL---ING 173
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNT 172
+ V AI F + + + L++ LC+ + +A L+ K++
Sbjct: 174 FVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLV---KEMLEKGW 230
Query: 173 K----SFNIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
K ++++++ G C G E A ++W ++ G+ DV + +I
Sbjct: 231 KPCVITYSLLMKGLCQ--GHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLA 288
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L+ M R + +N ++ K +++A+ + + G+ P++V+YN +K
Sbjct: 289 LMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKG 348
Query: 288 LCKARKLDEARQAFDEMLQRGISPT 312
LC ++ A + L + I+P+
Sbjct: 349 LCSCSRISFAILFLQDALAKKIAPS 373
>gi|296085435|emb|CBI29167.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +RG+C + S+S + K+ + ++L+ +MK+ GI D YN VI A+
Sbjct: 1 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 60
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V +I + + M+E G PNVVTYN++IK LC+ ++ EA FD+M ++G +P + TYH
Sbjct: 61 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 120
Query: 319 FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
F FG W VF VW ++ E G P
Sbjct: 121 F----------FG--------------------------WGFLRPVFIVWKKMEEQGCSP 144
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
D +Y ALI AL G ++ A +Y EM K L +P+ D
Sbjct: 145 DACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVD 184
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 32/173 (18%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S++I ++ C G A +++ EM ++GI DVV+++ +I + + +R+F +
Sbjct: 12 SYSIYMDIQCKS-GKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFRE 70
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT------------- 280
MK +G E + YN +I L + +++A + M EKG APNV+T
Sbjct: 71 MKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGWGFLRPV 130
Query: 281 ------------------YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
YN+LI L + +D AR+ +EML +G+S R
Sbjct: 131 FIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRV 183
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 304 MLQRGISPTIRTYHAFLDI-IRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M +RG+ ++ +Y ++DI ++G+ L + M+K G + Y +I+
Sbjct: 1 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 60
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDEL 420
+V+ E+ E G P+ +Y +I L NG++ EA+ + +M+EK P T
Sbjct: 61 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 120
Query: 421 LQDWSY 426
W +
Sbjct: 121 FFGWGF 126
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N I+ C G REA V+ +M ++G +V+++ C L V +
Sbjct: 79 NVVTYNTIIKLLCEN-GRIREAYGVFDQMREKGYAPNVITYHCFFG----WGFLRPVFIV 133
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ +M+ G D YNA+I AL + +V A + M KG++
Sbjct: 134 WKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLS 178
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 27/371 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ T Y +I L K + A+ L EM+ P + TL I +C +
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL---IDSFCKAGFI 273
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
+A N F +R A + + L+ A + + V A + M +K P N ++
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP-NIVTYTA 332
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICY-----------------DVVSFSCIISCYSK 220
+++G C G +A +++ M + + +V ++ ++ K
Sbjct: 333 LIDGLCKA-GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + + L M G E + VY+A+I K + +A + +M E G PNV T
Sbjct: 392 AYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYT 451
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
Y+SLI L K ++LD A + +ML+ +P + Y +D + + G +E + L+ M
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMME 511
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ GC P TY +I F + + ++ ++S G P+ +Y LI+ G L+
Sbjct: 512 EKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLD 571
Query: 398 EAHQYYMEMKE 408
EAH+ EMK+
Sbjct: 572 EAHKLLEEMKQ 582
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 176/446 (39%), Gaps = 81/446 (18%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
W A + ++ + T Y MI+ L + F+ A + MR P+++T +
Sbjct: 26 WREALSLL----EKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYR 81
Query: 105 TLL-----------------ILIRRYC---------AVHDVGRAINAFYAYKRFKFAV-- 136
LL ++I C VH R+ + YAYK K V
Sbjct: 82 ILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQC 141
Query: 137 ----GIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN------IILNGWCNI- 185
G + L+ +C + KDV K++ ++LN NI
Sbjct: 142 GCQPGYVVYNILIGGICSSEEP---------GKDVLDLAEKAYGEMLEAGVVLNKV-NIS 191
Query: 186 --------IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
IG +A V EM +G D ++S +I A + K +LF +MKR
Sbjct: 192 NFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN 251
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D VY +I + K ++ A + ME G APNVVTY +LI K+RK+ +A
Sbjct: 252 GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKA 311
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGC------------- 341
+ ++ ML +G +P I TY A +D + + G E+ + + M+K
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVD 371
Query: 342 ----QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+P TY L+ + Q + +S G P+ Y ALI GKL+
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD 431
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQD 423
EA + + M E P T L D
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLID 457
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 159/372 (42%), Gaps = 29/372 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G A + Y +I K RK A + + M P++VT L I C
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL---IDGLCKA 340
Query: 117 HDVGRAINAFYAYKR-----------FKFAVGIED------FQGLLSALCRYKNVQDAEH 159
+ +A + K+ F+ G + + L+ LC+ V++A
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400
Query: 160 LM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L+ + P N ++ +++G C G EA+ V+ M + G +V ++S +I
Sbjct: 401 LLKSMSVEGCEP-NHVVYDALIDGCCKA-GKLDEAQEVFTTMLECGYDPNVYTYSSLIDR 458
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
K + L L++ +M + +Y +I L K +A LM MEEKG PN
Sbjct: 459 LFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLE 334
VVTY ++I K+ ++++ + +M +G +P TY ++ TG +E LLE
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M++ Y +I+ F+ R+F + EISEN + P Y LI G
Sbjct: 579 EMKQTYWPRHVAGYRKVIEGFN--REFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAG 636
Query: 395 KLEEAHQYYMEM 406
+LE A + E+
Sbjct: 637 RLEIALELNEEL 648
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 107/278 (38%), Gaps = 46/278 (16%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
MS G D + C K+ + L L ++ + + D +Y +I L + L
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVP---DTVLYTKMISGLCEASL 57
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++A+ + M PNV+TY L+ KL ++ M+ G P+ R +++
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 319 FLDI-IRTGEEVFG--LLESMRKMGCQPTNDTYIML------------------------ 351
+ R+G+ + LL+ M + GCQP Y +L
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 352 ------------IKKFSRWR----QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
I FSR +F + V E+ G PD S+Y+ +I L K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+E+A Q + EMK + P+ L D F+E+
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQ 275
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 178/403 (44%), Gaps = 9/403 (2%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A T FL +Q G + Y+ M+ +++ D A ++ EM P+ T
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS--- 523
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
ILI + D A + F + +++ LC+ A+ ++ +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ + S+N I++G+ + G + A + EMS+ G +VV+F+ +I+ + K+ +
Sbjct: 584 KRYSMSCTSYNSIIDGFVKV-GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L + +MK M ++ D Y A+I K +K A +L + E G+ PNV YNSLI
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQ 342
K+D A + +M+ GIS + TY +D +++ G L + +G
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P +++L+ S+ QF K+ E+ + P+ Y+ +I G L EA +
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS 445
+ EM EK ++ + LL K +I+SL + + +S
Sbjct: 823 HDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEMRS 865
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 158/387 (40%), Gaps = 92/387 (23%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYK-RFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD 166
+ ++ C D+ A++ + + E + ++ A + N+++A +M ++
Sbjct: 279 LAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVM--DEM 336
Query: 167 V---FPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
V P + + ++NG+C N +G +A ++ M + G+ D V FS ++ + K
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELG---KALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHA---------------------LAKGRL-- 258
+ K + + +MK + I + + +I +A G +
Sbjct: 394 MEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCN 453
Query: 259 -----------VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
V A S +K ME+KG+ PNVV YN+++ C+ + +D AR F EML++
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 308 GISPTIRTYHAFLD--------------------------------II----------RT 325
G+ P TY +D II +
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 326 GEEVFGLLESMR-KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
E + L++ R M C +Y +I F + + + + E+SENG P+ ++T
Sbjct: 574 KEMLQNLIKEKRYSMSCT----SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQL 411
+LI+ + +++ A + EMK +L
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMEL 656
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 64/283 (22%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++N N++ SS+ R E++ R +F+ +++ Y + + + + F
Sbjct: 150 NVMVN---NLVDSSK---RFGFELTPR-------AFNYLLNAYIRNKRMDYAVDCF---- 192
Query: 236 RMGIECDRKVY------NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
G+ DRKV N V+ +L + L+ +A + M GVA + VT L++
Sbjct: 193 --GLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASL 250
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYH-AFLDIIRTGEEVFGL--LESMR-KMGCQPTN 345
+ RK +EA + F ++ RG P + A +T + V L L MR K+G +
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 346 DTYIMLIKKF-----------------------------------SRWRQFGNVFKVWNE 370
+TY +I F + + G ++N
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ E G PD+ ++ ++ N ++E+A ++YM MK ++ P
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------F 162
LI CA DV RA+ F + + + L+ LCR + A +M
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C+ D++ ++NI++NG C + G+ +A V + +G DV +F+ +I Y K
Sbjct: 320 CHPDIW-----TYNIVINGLCKM-GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRL 373
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L L+L ++M GI D YN+V++ L K K+ + M KG PN +TYN
Sbjct: 374 KLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN 433
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKM 339
LI+ CK +L+EA M Q G+ P +++ + R G + + L + + +
Sbjct: 434 ILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK 493
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G T DT+ +LI +S K++ E+ G PD +Y L+ ++ A
Sbjct: 494 GYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRA 553
Query: 400 HQYYMEMKEKQLLPEPKT 417
+ + EM K +P T
Sbjct: 554 YVHLAEMVSKGFVPSMAT 571
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 180/416 (43%), Gaps = 53/416 (12%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V K T I IR C + A+ + + A + + L+ LC+ VQ+A
Sbjct: 148 VNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQY 206
Query: 161 M--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCY 218
+ N+ P + ++N I++G+C +EA + + +G D V++ +I+
Sbjct: 207 LRRMMNQGCIP-DDFTYNTIIDGYCKR-DMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNV 278
++ + L LF++ + ++ D VYN+++ L + L+ A+ +M M E G P++
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI 324
Query: 279 VTYNSLIKPLCKA-----------------------------------RKLDEARQAFDE 303
TYN +I LCK KLD A Q +
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384
Query: 304 MLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M GI+P TY++ L+ + + G +EV E M GC+P TY +LI+ F + Q
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DE 419
V +S++G PD S+ LIH NG L+ A+ + ++ EK T +
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504
Query: 420 LLQDWS--YNKQFVERQIASL--KAHQPQSGQNTRVI----SKKSDQDREFLQQPE 467
L+ +S N Q E+ + K ++P RV+ K ++ DR ++ E
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMISKGYKPDL-YTYRVLVDGSCKAANVDRAYVHLAE 559
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 156 DAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSC 213
DA HL +DVFP + +FN +L+ C G E+ + ++ +RG+ + + +
Sbjct: 98 DARHLFDEMLRRDVFP-DVATFNNVLHALCQK-GDIMESGALLAKVLKRGMSVNKFTCNI 155
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
I + L + + L + M I D YN ++ L K V++A ++ M +G
Sbjct: 156 WIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQG 214
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVF 330
P+ TYN++I CK L EA + + + +G P TY + ++ + G E
Sbjct: 215 CIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERAL 274
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
L + +P Y L+K R + +V NE+ E+G PD +Y +I+ L
Sbjct: 275 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPE 414
G + +A + K LP+
Sbjct: 335 CKMGNISDAAVVMNDAIVKGYLPD 358
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K+ A ++++ P + T T+ I YC + A+
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM---IDGYCKRLKLDSALQLVE 383
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFCNKDVFPFNTKSFNIILNGWC 183
+ A + +L+ LC+ ++ E ++ K P N ++NI++ +C
Sbjct: 384 RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMIL--KGCRP-NAITYNILIENFC 440
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I EA V + MSQ G+ D +SF+ +I + + +L LF ++ G
Sbjct: 441 KI-NQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 499
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+N +I A + ++ A + M KG P++ TY L+ CKA +D A E
Sbjct: 500 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAE 559
Query: 304 MLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQP 343
M+ +G P++ T+ L+ + E ++ M +MG P
Sbjct: 560 MVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 40/288 (13%)
Query: 166 DVF--PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
D+F P ++N I++ N +A +V++ M G+ D + + I +
Sbjct: 2 DLFGCPPAAPAYNAIMDALVNT-AYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
H LRL + G + Y V+ L DA L M + V P+V T+N+
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 284 LIKPLCKARKLDEARQAFDEMLQRG----------------------------------I 309
++ LC+ + E+ ++L+RG I
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYI 180
Query: 310 SPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFK 366
+P + TY+ + + +V + +R+M GC P + TY +I + + +
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + G PDR +Y +LI+ L G +E A + + E + K L P+
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE 327
M+ G P YN+++ L D+A + + ML G++P RT+ + TG
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 328 E--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
LL S+ + GC Y +++ + +++E+ PD +++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 386 LIHALFLNGKLEEA 399
++HAL G + E+
Sbjct: 121 VLHALCQKGDIMES 134
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 169/352 (48%), Gaps = 13/352 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+++++ L + F+ AW +E++ + I+I+ C ++ ++
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVK----FDVYSFGIMIKGCCENGNLDKSFQLLG 186
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCN 184
+ + + + L+ C+ +++ A +F +K N +F +++NG
Sbjct: 187 LLQDMGLSPNVVIYTTLIDGCCKNGDIERAR--LFFDKMGEMGLVANQYTFTVLINGLFK 244
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G ++ ++ +M G+ ++ +++C+++ Y + + LFD+M+ G+E +
Sbjct: 245 K-GLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN +I + + V +A L+ M++ V+PN++TYN+LI C LD+A D++
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQF 361
G+SP++ TY+ ++ G+ + R+M G P+ T +LI + R ++
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
F++++ + + G PD Y LIH L + G ++E+ + + M E + P
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEP 475
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 45/315 (14%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCN--KDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
F LL +L R + A +F N K+ F+ SF I++ G C G+ ++ ++
Sbjct: 131 FNSLLGSLVRSNCFEKA--WLFFNELKERVKFDVYSFGIMIKGCCEN-GNLDKSFQLLGL 187
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ G+ +VV ++ +I K ++ + FD+M MG+ ++ + +I+ L K L
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 259 VKD-----------------------------------AISLMKSMEEKGVAPNVVTYNS 283
KD A L M E+GV NVVTYN+
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH----AFLDIIRTGEEVFGLLESMRKM 339
LI +C+ ++ EA + D+M + +SP + TY+ F D+ ++ LL+ ++
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNL-DKASSLLDQLKSN 366
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G P+ TY +LI+ +S+ + V + E+ G P + + T LI A ++E+A
Sbjct: 367 GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKA 426
Query: 400 HQYYMEMKEKQLLPE 414
Q Y M++ L+P+
Sbjct: 427 FQIYSSMEKFGLVPD 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 164/395 (41%), Gaps = 45/395 (11%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D E A FF G+ G + + +I L K + L ++M+ P+L T
Sbjct: 212 DIERARLFFDKMGEM-GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTY 270
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
L+ YC + RA + F + + + L+ +CR + V
Sbjct: 271 NCLM---NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERV--------- 318
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
W EAE++ +M + + ++++++ +I + N
Sbjct: 319 ------------------W--------EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGN 352
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
L K L DQ+K G+ YN +I +K K L + ME +G++P+ VT
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTV 412
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMG 340
LI + +++++A Q + M + G+ P + Y + + G +E L SM +M
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH 472
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P++ Y +I + + ++ E+ G P+ +SY+++I L +GK EEA
Sbjct: 473 VEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAE 532
Query: 401 QYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
+M E QL P + +L S K F E +I
Sbjct: 533 VLLDKMIELQLKP---SASILNMISKAKNFTELKI 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVA--PNVVTYNSLIKPLCKARKLDEARQAFD 302
+Y ++I+A K +L+ A+ M +KG+ PN+ +NSL+ L ++ ++A F+
Sbjct: 95 LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFN 152
Query: 303 EMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
E+ +R + + ++ + G ++ F LL ++ MG P Y LI +
Sbjct: 153 ELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
++++ E G ++ ++T LI+ LF G ++ + +MK L P T
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271
Query: 420 LLQD 423
L +
Sbjct: 272 CLMN 275
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 156 DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
DA + V P + ++N ++ G C G + A V EM +R DVV+++ ++
Sbjct: 143 DAARRLVAEMPVEP-DAYTYNTLIRGLCGR-GRTANALAVLDEMLRRRCVPDVVTYTILL 200
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + ++L D+M+ G D YN V++ + + V DAI +K++ G
Sbjct: 201 EATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 260
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
PN V+YN ++K LC A + ++A + EM Q+G P + T++ + + R G E +
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 320
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
LE + K GC P + +Y L+ F + ++ + + G PD SY L+ AL
Sbjct: 321 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 380
Query: 393 NGKLEEAHQYYMEMKEKQLLP 413
+G+++ A + ++K+K P
Sbjct: 381 SGEVDVAVELLHQLKDKGCAP 401
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 18/363 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L + A A++DEM P +VT IL+ C +A+
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT---ILLEATCKRSGYKQAMKLLD 217
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWC 183
+ I + +++ +C+ V DA + K++ + NT S+NI+L G C
Sbjct: 218 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL---KNLPSYGCEPNTVSYNIVLKGLC 274
Query: 184 NIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ R +AE + EM Q+G +VV+F+ +IS + + L + +Q+ + G
Sbjct: 275 T---AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 331
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YN ++HA K + + A++ + M +G P++V+YN+L+ LC++ ++D A +
Sbjct: 332 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 391
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++ +G +P + +Y+ +D + + G +E LL M G QP TY + R
Sbjct: 392 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + + ++ + G P+ Y A+I L + A + M +P T
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 511
Query: 419 ELL 421
+L
Sbjct: 512 TIL 514
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 137/347 (39%), Gaps = 43/347 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ K + A L+DEMR P +VT +++ C V AI
Sbjct: 196 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYN---VVVNGICQEGRVDDAIEFLK 252
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + +L LC + +DAE LM + P N +FN++++ C
Sbjct: 253 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK- 311
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G A V ++ + G + +S++ ++ + K + + K + D M G D Y
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL + V A+ L+ +++KG AP +++YN++I L KA K EA + +EM+
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 307 RGISPTIRTYHAFL------DIIRTGEEVFG----------------------------- 331
+G+ P I TY D I FG
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491
Query: 332 ---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L M GC P TY +LI+ + + +E+ G
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
I + LL+ALCR V A L+ +K P S+N +++G G ++EA +
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYNTVIDGLTKA-GKTKEALEL 425
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM +G+ D++++S I + + + +R F +++ MGI + +YNA+I L K
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 485
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
R AI L M G PN TY LI+ L + EAR DE+ RG+
Sbjct: 486 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 24/345 (6%)
Query: 7 ILREFSHKRS----------EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 56
IL E + KRS EMR+K I + +V+ + R D F L
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL--- 254
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G +T Y+ ++ L +++ A L+ EM P++VT +LI C
Sbjct: 255 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN---MLISFLCRK 311
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A+ ++ + LL A C+ K + A + ++ +P + S
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVS 370
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +L C G A + ++ +G ++S++ +I +KA + L L ++M
Sbjct: 371 YNTLLTALCRS-GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G++ D Y+ + L + ++DAI +++ G+ PN V YN++I LCK R+
Sbjct: 430 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 489
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
A F M+ G P TY ++ G GL++ R +
Sbjct: 490 HSAIDLFAYMIGNGCMPNESTYTILIE----GLAYEGLIKEARDL 530
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YNA++ + A L+ M V P+ TYN+LI+ LC + A
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 302 DEMLQRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
DEML+R P + TY L+ R+G ++ LL+ MR GC P TY +++ +
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + + G P+ SY ++ L + E+A + EM +K P T
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Query: 419 ELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS-----------KKSDQDREFLQ 464
+L + K VE + L+ P+ G +S KK D+ FL
Sbjct: 302 NMLISFLCRKGLVEPALEVLE-QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 25/378 (6%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------ILIRRYCAVHDVGR 121
Y +++A+L D W + D +R E +V ++ +L ++ +C D+
Sbjct: 329 YTSVVALL-----CDKGW-ISDALRVVE---DMVQRKVILDEALYTTVLSGFCNKGDLVS 379
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNII 178
A F +R A + +++ LCR +++AE L M+ + + ++ ++
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR--LDVDEVTYTVL 437
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
++G+C G EA ++ M QRG+ +VV+++ + K ++ L +M G
Sbjct: 438 IDGYCKR-GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+E + YN++I+ L K ++ A+ M M+ + P+V TY +LI LCK+ LD A
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFG---LLESMRKMGCQPTNDTYIMLIKKF 355
EML +GI PTI TY+ ++ V G LL+ M + P TY L+K++
Sbjct: 557 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQY 616
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LPE 414
+ +++ + GP+ ++Y LI ++EA ++ EM +K L
Sbjct: 617 CIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTA 676
Query: 415 PKTDELLQDWSYNKQFVE 432
L++ + K+FVE
Sbjct: 677 TSYSALIRLLNKKKKFVE 694
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 10/321 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
IL++ C D GR +A + A + + L+ C +++A L+
Sbjct: 264 ILLKALC---DAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAG 320
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P N + ++ C+ G +A RV +M QR + D ++ ++S + +L
Sbjct: 321 GVEP-NATVYTSVVALLCDK-GWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
R FD+M+R G+ D Y +I+ L + +++A L++ M + + + VTY LI
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQ 342
CK K+ EA Q + M+QRG++P + TY A D + + G+ LL M G +
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
TY LI + + ++ PD +YT LI AL +G L+ AH
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
EM +K + P T +L +
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMN 579
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+ ALC+ ++ A L+ +K + P ++N+++NG+C + G +++
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKP-TIVTYNVLMNGFC-MSGRVEGGKKLLDW 596
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M ++ I + +++ ++ Y N+ ++ M+ + + YN +I K R
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+K+A+ M +KG +Y++LI+ L K +K EAR+ F +M + G++ Y
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDF 716
Query: 319 FLDI 322
++D+
Sbjct: 717 YIDL 720
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
D SF ++ C A L ++++ GI + NAV+ L + +AI L
Sbjct: 203 DPASFDFLLLCLPSAP-------LLRRLRQYGISPSPEACNAVLSRLP----LDEAIELF 251
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---II 323
+ + K NV +YN L+K LC A ++ +ARQ FDEM +P + TY + +
Sbjct: 252 QELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCAL 304
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E LL+ M G +P Y ++ + +V ++ + D + Y
Sbjct: 305 GELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY 364
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQL 411
T ++ G L A +++ EM+ K L
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEMQRKGL 392
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 7/244 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K + A + +M P + T TL I C D+ RA +
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL---IDALCKSGDLDRAHSLLQ 560
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
I + L++ C V+ + L+ K++ P N ++N ++ +C I
Sbjct: 561 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHP-NAATYNSLMKQYC-I 618
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + ++ M R + + +++ +I + KARN+ + L D+M + G
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
Y+A+I L K + +A L M ++G+ Y+ I L+ DE++
Sbjct: 679 YSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738
Query: 306 QRGI 309
+ I
Sbjct: 739 EASI 742
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 16/362 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++ L K A ++D E P ++T ILI C VG+A+
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT---ILIEATCKESGVGQAMKLLD 275
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFNIILNGW 182
+ + + L++ +C+ + +A + F N P N + NIIL
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEA--IKFLNN--MPSYGCQPNVITHNIILRSM 331
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
C+ G +AE++ +M ++G VV+F+ +I+ + L + + + ++M G +
Sbjct: 332 CST-GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YN ++H K + + AI + M +G P++VTYN+L+ LCK K+D A + +
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 303 EMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
++ +G SP + TY+ +D + + G E LL+ MR+ G +P TY L+ SR
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ K ++++ G P+ +Y +++ L + + + A + M K+ P T
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570
Query: 420 LL 421
+L
Sbjct: 571 IL 572
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 149/308 (48%), Gaps = 6/308 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
LIR +C + +A ++ + + L+S C+ + +A ++ +V
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLD-RMNVA 213
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + ++N IL C+ G ++A V Q+ DV++++ +I K + + +
Sbjct: 214 P-DVVTYNTILRTLCDS-GKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+L D+M+ G + D YN +I+ + K + +AI + +M G PNV+T+N +++ +
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTN 345
C + +A + +ML++G SP++ T++ ++ + R G +LE M GC P +
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+Y L+ F + ++ + + + G PD +Y L+ AL +GK++ A + +
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 406 MKEKQLLP 413
+ K P
Sbjct: 452 LSSKGCSP 459
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 43/347 (12%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K A L+DEMR + P +VT +LI C + AI
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN---VLINGICKEGRLDEAIKFLN 310
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFN---------- 171
+ + +L ++C DAE L+ C+ V FN
Sbjct: 311 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 370
Query: 172 --------------------TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+ S+N +L+G+C R E + + M RG D+V++
Sbjct: 371 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI-MVSRGCYPDIVTY 429
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +++ K + + + +Q+ G YN VI L+K + AI L+ M
Sbjct: 430 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 489
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEE 328
KG+ P+++TY+SL+ L + K+DEA + F ++ GI P TY++ + + R +
Sbjct: 490 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 549
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
L M C+PT TY +LI+ + + NE+ G
Sbjct: 550 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG D++ + +I + + K + + +++ G D YN +I K
Sbjct: 140 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 199
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ +A+ ++ M VAP+VVTYN++++ LC + KL +A + D LQ+ P + TY
Sbjct: 200 IDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 256
Query: 319 FLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ +G + LL+ MR G +P TY +LI + + K N + G
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
P+ ++ ++ ++ G+ +A + +M K P T +L ++ + + R I
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376
Query: 436 ASLKAHQPQSGQNTRVIS 453
L+ P G +S
Sbjct: 377 DILE-KMPMHGCTPNSLS 393
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + S ++ +I L + A ++++M P+ ++ LL +C
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL---HGFCKEK 405
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ RAI I + LL+ALC+ V A ++ +K P ++
Sbjct: 406 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITY 464
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G + G + A ++ EM ++G+ D++++S ++S S+ + + ++ F ++
Sbjct: 465 NTVIDGLSKV-GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 523
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+GI + YN+++ L K R AI + M K P TY LI+ +
Sbjct: 524 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 583
Query: 296 EARQAFDEMLQRGI 309
EA +E+ RG+
Sbjct: 584 EALDLLNELCSRGL 597
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++D ++SM +G P+++ SLI+ C+ K +A + + Q G P + TY+
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189
Query: 319 FLDIIRTGEEVFGLLESMRKMG-----------------------------------CQP 343
+ E+ L+ + +M C P
Sbjct: 190 LISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +LI+ + G K+ +E+ G+ PD +Y LI+ + G+L+EA ++
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 309
Query: 404 MEMKEKQLLPEPKTDELL 421
M P T ++
Sbjct: 310 NNMPSYGCQPNVITHNII 327
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 172/366 (46%), Gaps = 18/366 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G Y +I GK ++ A +++EM P V L I +
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL---IDGFMRQG 355
Query: 118 DVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFN 171
D G A + K A G++ + L+ +C++ +++ A+ L+ + P +
Sbjct: 356 DSGEA----FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKP-D 410
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T+++N ++ G+ +SR + + EM + + + II+ + ++ R+F
Sbjct: 411 TQTYNNMIEGYLKEQNTSR-VKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVF 469
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+ M +G++ + +Y +I + ++A+ ++K M++KGV P+V+ YNS+I LCK+
Sbjct: 470 EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKS 529
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTY 348
RK++EA+ EM++RG+ P + TY A + ++GE + M G P +
Sbjct: 530 RKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVC 589
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI + + ++ + PD +Y+ALIH L NGKL+ A + E E
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649
Query: 409 KQLLPE 414
K L+P+
Sbjct: 650 KGLVPD 655
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 180/410 (43%), Gaps = 39/410 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G T+ Y+ MI K + L+ EM+ P+ T ++ + R+ ++ D
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465
Query: 120 GRA-------------------INAFYAYKRFKFAV---------GIED----FQGLLSA 147
R I RF+ AV G++ + ++
Sbjct: 466 SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIG 525
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LC+ + +++A+ + + + P N ++ +++G+C G + A+R + EM GI
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKP-NVYTYGALIHGYCKS-GEMQVADRYFKEMLGCGIA 583
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+ V + +I Y K + + +F M + D + Y+A+IH L + ++ A+ L
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIR 324
+ EKG+ P+V TYNS+I CK + +A Q + M Q+GISP I TY+A ++ + +
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G E L + + G TY +I + + F++++E++ G PD
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
Y+ALI G E+A ++E +K + L+ + + + +E
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIE 813
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 13/356 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+++I L K RK + A + EM P++ T L I YC ++ A F
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL---IHGYCKSGEMQVADRYFK 575
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNI 185
A L+ C+ + +A + C + V P + ++++ +++G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP-DVRTYSALIHGLLRN 634
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + A + E ++G+ DV +++ IIS + K + K +L + M + GI +
Sbjct: 635 -GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIIT 693
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA+I+ L K ++ A L + KG+A N VTY ++I CK+ L +A + FDEM
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753
Query: 306 QRGISPTIRTYHAFLDIIR---TGEEVFGL-LESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+G+ P Y A +D R E+ L LES++K G T+ + L+ F + +
Sbjct: 754 LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQK-GFASTS-SLNALMDGFCKSGKV 811
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ ++ + PD +YT LI G L+EA Q++++M+++ L+P T
Sbjct: 812 IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALT 867
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 184/454 (40%), Gaps = 69/454 (15%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
K+S ++V V++ ND + FF W Q G++ + + + IL R F A ++
Sbjct: 64 KLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSV 123
Query: 88 IDEM----RGG--ETGPSLVTK---------------------QTLLILIRRYCAVHDVG 120
+++M GG E SL+ +LI Y
Sbjct: 124 VNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFD 183
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALC------------------------------- 149
A++ F KR F VG+ GLLS L
Sbjct: 184 EAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLI 243
Query: 150 ----RYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
R N ++ + L+F K P + ++N+++ G C G EA + M ++G
Sbjct: 244 NAHFRAGNAKEGKRLLFEMEEKGCSP-SLVTYNVVIGGLCRA-GEVDEAFELKKLMDKKG 301
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ DV ++S +I + K + + + ++M G++ Y A+I + +A
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
+ + M +GV N+ TYN+L+K +CK +++A +EM+ GI P +TY+ ++
Sbjct: 362 RVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGY 421
Query: 324 ---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ V LL M+K PT T M+I R + +V+ + G P+
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
YT LI G+ +EA + M +K + P+
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 136/348 (39%), Gaps = 76/348 (21%)
Query: 141 FQGLLSALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++S C+ + A H C K + P N ++N ++NG C G A ++
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISP-NIITYNALINGLCKA-GEIERARELFDG 716
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY------------ 246
+ +G+ ++ V+++ II Y K+ NL K RLFD+M G+ D VY
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 247 ----------------------NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
NA++ K V +A L++ M +K V P+ VTY L
Sbjct: 777 TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------------DI 322
I CK L EA Q F +M +R + P TY A L DI
Sbjct: 837 IDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDI 896
Query: 323 --------------IRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
++ G+ V L++ M K G + + +LI R V K
Sbjct: 897 EPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLK 956
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V +I E G ++ + L+ GK++ A + M + +P+
Sbjct: 957 VLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F ++++G+ G EA ++ + G ++ + ++S KA L R ++ M
Sbjct: 169 FELLIDGY-KKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ D Y +I+A + K+ L+ MEEKG +P++VTYN +I LC+A ++
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
DEA + M ++G+ + TY +D + E +LE M G +P + Y L
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I F R G F+V E+ G + +Y AL+ + G +E+A EM +
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407
Query: 412 LPEPKT 417
P+ +T
Sbjct: 408 KPDTQT 413
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G AH+ Y T+I K A+ L DEM P L+ R+ +
Sbjct: 721 GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKE---GNT 777
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+A++ F + FA L+ C+ V +A L+ +K V P + ++ I
Sbjct: 778 EKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKP-DHVTYTI 835
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EAE+ +++M +R + + ++++ ++S Y+ A ++ LFD+M
Sbjct: 836 LIDYHCKT-GFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 238 GIECDRKVYNAVIHA-LAKGRLVKDAISLMKSMEEKG--VAPNVVTYNSLIKPLCKARKL 294
IE D ++ +I A L +G VK + L+ M +KG V+ NV + LI PLC+ +
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVK-TLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHV 951
Query: 295 DEARQAFDEMLQRGISPTIRT 315
E + +++ ++G++ ++ T
Sbjct: 952 SEVLKVLEKIEEQGLNLSLAT 972
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 136/335 (40%), Gaps = 7/335 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G + + Y+ +I L K + + A L D + G + VT T+ I YC
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI---IDGYCKSG 740
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
++ +A F + L+ + N + A L + +T S N
Sbjct: 741 NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNA 800
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G+C G EA ++ +M + + D V+++ +I + K L + + F M++
Sbjct: 801 LMDGFCKS-GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + Y A++ + +L M K + P+ VT++ +I K +
Sbjct: 860 NLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKT 919
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ D+ML++G + + H +D + E EV +LE + + G + T L++
Sbjct: 920 LKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRC 979
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F + + +V + PD + LI+
Sbjct: 980 FHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINV 1014
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 23/368 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL---ILIRRYCAV 116
G++ Y ++ L ++ + D A AL++++ P+ V TL+ + R+
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFEEA 360
Query: 117 HDV--GRAINAFYAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLMFCNKDVFPFNT 172
D+ + A Y + F + I+ +G L + N A+ F N
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR--------FEPNV 412
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ I++NG+C G EA + MS +G+ + V ++C+I K N+ + L+LF
Sbjct: 413 ITYTILINGFCKQ-GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFG 471
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G + D +N++I+ L K +++A+SL M +GV N VTYN+L+
Sbjct: 472 EMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRD 531
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+ +A + DEML RG TY+ + + +TG E+ GL E M G PT +
Sbjct: 532 SIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN 591
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI R + + K ++ G PD +Y +LI+ L G ++EA + +++ +
Sbjct: 592 ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651
Query: 410 QLLPEPKT 417
+ P+ T
Sbjct: 652 GIRPDAIT 659
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 163/342 (47%), Gaps = 24/342 (7%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA--- 115
+GY ++ MI L K +A L++EM P+++T ILI +C
Sbjct: 371 AGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYT---ILINGFCKQGR 427
Query: 116 VHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFP 169
+ + +N+ A VG + L+ ALC+ N+++A L C D++
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVG---YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
FN+ ++NG C EA ++ +M G+ + V+++ ++ + ++ + +
Sbjct: 485 FNS-----LINGLCK-NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
L D+M G D YN +I AL K V+ + L + M KG+ P +++ N LI LC
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
+ K+++A + +M+ RG++P I TY++ ++ + + G +E L ++ G +P
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAI 658
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
TY LI + F + + + ++G P+ +++ LI+
Sbjct: 659 TYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 15/362 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ Y T+I L + + A L+++M P + T ++ + R +H
Sbjct: 233 KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ + ++ F+ + L+ LCR V +A L+ NK P NT +N
Sbjct: 293 EAAKLLDRMLLRG---FSTDALTYGYLMHGLCRMGQVDEARALL--NKIPNP-NTVLYNT 346
Query: 178 ILNGWCNIIGSSREAER---VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+++G+ + S R E ++ M G D +F+ +I K L L L ++M
Sbjct: 347 LISGY---VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
E + Y +I+ K +++A ++ SM KG++ N V YN LI LCK +
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
+EA Q F EM +G P I T+++ ++ + EE L M G TY L
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ F FK+ +E+ G D +Y LI AL G +E+ + EM K +
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583
Query: 412 LP 413
P
Sbjct: 584 FP 585
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 155/382 (40%), Gaps = 45/382 (11%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D + F AG Q GY+H+ + +I LG V F L+ +M+ L+ K
Sbjct: 78 DIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKD----EGLLFK 133
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC 163
++L ILI ++ G+A GL R + D + C
Sbjct: 134 ESLFILIMKH-----YGKA--------------------GLPGQATRL--LLDMWGVYSC 166
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+ +N +I+++G C R A V+ +M RG+ V +F ++
Sbjct: 167 DPTFKSYNV-VLDILVDGDC-----PRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSE 220
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ L M + G + +Y +IHAL + V +A+ L++ M P+V T+N
Sbjct: 221 VDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFND 280
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMG 340
+I LC+A ++ EA + D ML RG S TY + + R G +E LL +
Sbjct: 281 VIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP--- 337
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFK-VWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
P Y LI + +F ++N + G PD ++ +I L G L A
Sbjct: 338 -NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396
Query: 400 HQYYMEMKEKQLLPEPKTDELL 421
+ EM K+ P T +L
Sbjct: 397 LELLNEMVAKRFEPNVITYTIL 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + +T Y+ +I L K + A L EM G P + T +L I C H +
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL---INGLCKNHKM 498
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF---PFNTKSFN 176
A++ ++ + L+ A ++Q A L+ ++ +F P + ++N
Sbjct: 499 EEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLV--DEMLFRGCPLDNITYN 556
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ C G+ + ++ EM +GI ++S + +IS + ++ L+ M
Sbjct: 557 GLIKALCKT-GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH 615
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ D YN++I+ L K V++A +L ++ +G+ P+ +TYN+LI C ++
Sbjct: 616 RGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFND 675
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII 323
A + + G P T+ ++ I
Sbjct: 676 ACLLLYKGVDSGFIPNEVTWSILINYI 702
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 17/282 (6%)
Query: 144 LLSALCRYKNVQDAEHLM--------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
LL +LC A+ L+ C+ DV +NT +++G+ G +A +
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT-----VIDGFFKE-GDVNKACDL 243
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM QRGI D+V++S ++ KAR + K QM G+ D YN +I+ +
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
K+A+ + K M + + P+VV N+L+ LCK K+ EAR FD M +G +P + +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363
Query: 316 YHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L+ T ++ L + M G P T+ +LIK ++ ++NE+
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++G P +Y +I AL GK+++A + + +M ++ ++P+
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P + T +LI+ Y + +A+ F + + + +++
Sbjct: 383 LFDLMLGDGIAPVICTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + +++ ++ G+C GS +A+ + E+ G+
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVP-DKYAYHCLIQGFCTH-GSLLKAKELISEIMNNGM 497
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V F II+ K + +FD +G+ D VYN ++ ++ A+
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PNVV Y +L+ CK ++DE F EMLQ+GI P+ Y+ +D +
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G V ++ M + G TY ++++ + R F ++ E+ D
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +I +F ++EEA + + L+P
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 177/466 (37%), Gaps = 82/466 (17%)
Query: 26 GIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
G++V + + S +L + A L + G Y+ ++ L K
Sbjct: 143 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 202
Query: 84 AWALIDEMRGGET--GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A L+ M G T P +V T+ I + DV +A + F + + +
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTV---IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFN---------------------------- 171
++ ALC+ + + AE + NK V P N
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319
Query: 172 ------TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ N ++ C G +EA V+ M+ +G DV S++ +++ Y+ L
Sbjct: 320 QSILPDVVALNTLMGSLCKY-GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ LFD M GI +N +I A A ++ A+ + M + GV P+VVTY ++I
Sbjct: 379 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-------------------------- 319
LC+ K+D+A + F++M+ +G+ P YH
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498
Query: 320 LDIIRTGEEVFGLLESMRKM------------GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
LDI+ G + L + R M G P Y ML+ + + +V
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + G P+ Y L++ G+++E + EM +K + P
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 45/316 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+IA L ++ K D A ++M P K LI+ +C + +A
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD---KYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ I F +++ LC+ V DA+++ + N + P + +N++++G+C +
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP-DAVVYNMLMDGYC-L 548
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G +A RV+ M GI +VV + +++ Y K + + L LF +M + GI+ +
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 246 YNAVI-----------------------------------HALAKGRLVKDAISLMKSME 270
YN +I L K R +AI L K +
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--E 327
V +++T N++I + + R+++EA+ F + + G+ P TY + ++I+ G E
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVE 728
Query: 328 EVFGLLESMRKMGCQP 343
E + SM+ GC+P
Sbjct: 729 EAEDMFSSMQNAGCEP 744
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ D + + ++ + + +A+ L+
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHR 174
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI--SPTIRTYHAFLD-IIRT 325
E G P+V +YN L+K LC K +A M + G SP + Y+ +D +
Sbjct: 175 TPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKE 234
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R ++ G PD +Y
Sbjct: 235 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTY 294
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
LI+ G+ +EA + + EM+ + +LP+
Sbjct: 295 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
+L+ YC V + +A+ F A + + L++ C+ + + L K
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P +T +NII++G G + A+ + EM++ GI + ++S ++ K R
Sbjct: 601 GIKP-STILYNIIIDGLFEA-GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + LF +++ M ++ D N +I + + R V++A L S+ G+ P VTY+ +I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTY-HAFLDIIRTGEEV 329
L K ++EA F M G P R H ++++ E V
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 763
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 169/398 (42%), Gaps = 44/398 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRG-GETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y+T+IA K D A + ++ G P+ V+ TL+I + C + A+ F
Sbjct: 14 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFL---CKMSRATDALAVF 70
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNI 185
+ L+ CR ++ A L+ F + +++ +++
Sbjct: 71 QEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL-GK 129
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G + +A V+ M + G D V ++ +ISC K + + L L + M R GI D +
Sbjct: 130 AGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 189
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YN VI L+ + A S M+ + +P+VVTYN+L+ L K R+ DEA FDEM
Sbjct: 190 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQ 249
Query: 306 QRGISPTIRTYHAFLDII------------------------------------RTG--E 327
P + T+ +D + R+G +
Sbjct: 250 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVD 309
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+ + L + M + C P + TY +L+ FSR ++ E+ G+ P ++Y LI
Sbjct: 310 KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 369
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWS 425
+L + G++E+A+ + EM K P+ +T L + S
Sbjct: 370 RSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLS 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV--YNAVIHALAKGRLVKDAIS 264
DVV+++ +I+ Y KA + + L +F ++K+ G C ++ ++ L K DA++
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEG-SCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
+ + M G+ +V N+LI C+ L +AR+ M + TY +D +
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 325 TGEEVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
LE +M+K GC P Y +LI + + ++ +++ G PD
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Y +I L G+ E+A+ ++ MK ++ P+ T
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 224
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 17/280 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+++G T Y+ +I+ LGK K D A L+++M P T ++I + C
Sbjct: 144 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT-YNIVIDVLSSCGR 202
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTK 173
++ +A + F KR K + + + LL+ L + + +A L M NK P +
Sbjct: 203 YE--KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK-CMP-DLT 258
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+F +++ G +A + + G + ++ +IS + ++ + K LF
Sbjct: 259 TFGTLIDTLAKA-GRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQD 317
Query: 234 MKRMGIEC----DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
M IEC D Y ++ ++ A+ L++ M +G P + TYN LI+ L
Sbjct: 318 M----IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLS 373
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV 329
A ++++A F EM+ +G +P ++TY A ++ + V
Sbjct: 374 MAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 413
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 39/193 (20%)
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG-ISPTIRTYHA---FLDIIRT 325
E AP+VV YN+LI CKA D A F + Q G P ++ FL +
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 326 GEEVFGLLESMRKMGCQPTND-----------------------------------TYIM 350
+ + + M G Q + TY
Sbjct: 63 ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ + + +V++ + + G PD Y LI L GK++EA + +M K
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182
Query: 411 LLPEPKTDELLQD 423
++P+ +T ++ D
Sbjct: 183 IMPDCRTYNIVID 195
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 12/361 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG A Y+ +I K + + A++ EM+ ++VT T + +C
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF---VDAFCKE 318
Query: 117 HDVGRAINAFYAYKRFKFAVGIE-DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTK 173
V A+ F A R + + E + L+ C+ + DA L+ ++ + P N
Sbjct: 319 GLVQEAMKLF-AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP-NVV 376
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ ++++G C G EA+ V M + G+ + + ++ +I + N + L L +Q
Sbjct: 377 TYTVMVDGLCKE-GKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G+E D +Y +I L K + V +A SL+ M G+ PN V Y +++ L KA K
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
EA ++L G P + TY A +D + + G E MR++G P Y
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI F + + NE+ + G D+ YT+LI L++A +M E
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615
Query: 411 L 411
L
Sbjct: 616 L 616
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 159/353 (45%), Gaps = 22/353 (6%)
Query: 70 TMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY 129
T++++L D A + +R P+ T +L+ + R V R +
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVP 198
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGWC 183
F F + I DF LC+ + +A L M C+ DV +N+ +++G+
Sbjct: 199 NVFTFNIVI-DF------LCKEGELVEARALFVRMKAMGCSPDVVTYNS-----LIDGY- 245
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G E E++ EM + G DVV+++ +I+C+SK + K F +MKR G+ +
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
++ + A K LV++A+ L M +G+ PN TY SL+ CKA +LD+A DE
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365
Query: 304 MLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M+ +G+ P + TY +D + + G+ E +L M + G + Y LI
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ N++ G D S Y LI L + K++EA +M L P
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP 478
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 14/289 (4%)
Query: 22 IEECGIKVSSELVSEVLS--WVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 79
+E G+K + L + ++ ++ N+ E A L K G Y T+I L K +
Sbjct: 401 MERGGVKANELLYTTLIHGHFMNNNSERALDL-LNQMKNKGMELDVSLYGTLIWGLCKDQ 459
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR---AINAFYAYKRFKFAV 136
K D A +L+ +M G P+ V T++ A+ G+ A+ + F
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMD------ALFKAGKESEAVALLHKILDSGFQP 513
Query: 137 GIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + L+ LC+ ++ +A H + N +++ +++G+C I GS +A +
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI-GSLNKAMHL 572
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
EM +G+ D V ++ +I Y K NL L +M G++ D Y I
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
++++A ++ M G+ P+ YN LI+ K ++EA +EM
Sbjct: 633 MNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR---LVKDAISLMKSMEEKGVAPNVVT 280
L +R +++++ + + + N ++ LA+ R LV+ L+ PNV T
Sbjct: 150 LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP-------VPNVFT 202
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMR 337
+N +I LCK +L EAR F M G SP + TY++ +D + G EEV L+ MR
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
K GC TY LI FS++ + + + E+ G + +++ + A G ++
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWS 425
EA + + +M+ + ++P T L D +
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGT 350
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 16/320 (5%)
Query: 60 GYAHSTREYHTMIAIL---GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G + Y M+ L GKV + D +L++ RGG L+ LI +
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLME--RGGVKANELLYTT----LIHGHFMN 423
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
++ RA++ K + + + L+ LC+ + V +A+ L+ + P NT
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP-NTVI 482
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I++ G EA + ++ G +VV++ +I KA ++ + + F++M
Sbjct: 483 YTTIMDALFKA-GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ +G++ + + Y A+I K + A+ LM M +KG++ + V Y SLI K L
Sbjct: 542 RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+A +M++ G+ + Y F+ + +E G+L M G P Y L
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCL 661
Query: 352 IKKFSRWRQFGNVFKVWNEI 371
I+K+ + + NE+
Sbjct: 662 IRKYQKLGNMEEASSLQNEM 681
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V + ++ LA L+ DA+ + + + V PN T N ++ L + R+ R+ FD +
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLL 195
Query: 305 LQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
P + T++ +D + + GE E L M+ MGC P TY LI + +
Sbjct: 196 ----PVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
V ++ +E+ ++G D +Y ALI+ G++E+A+ Y+ EMK + ++ T
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 12/258 (4%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
++M+NK E + + L+ + + D EA AG G +T Y T++ L
Sbjct: 434 NQMKNKGMELDVSLYGTLIWGLCKDQKVD-EAKSLLHKMAG--CGLRPNTVIYTTIMDAL 490
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K K A AL+ ++ P++VT L I C + AI+ F +
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNVVTYCAL---IDGLCKAGSISEAISHFNKMRELGLD 547
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWCNIIGSSREA 192
++ + L+ C+ ++ A HLM N+ + + + +++G+ + ++A
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLM--NEMIDKGMSLDKVVYTSLIDGYMKQ-ANLQDA 604
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ +M + G+ D+ ++C IS + + + + +M GI D+ VYN +I
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664
Query: 253 LAKGRLVKDAISLMKSME 270
K +++A SL ME
Sbjct: 665 YQKLGNMEEASSLQNEME 682
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 25/350 (7%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ +I K KF A L DEM PS VT ++ I +C + + A + FY
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSM---IDGFCKQNRLDAAEHMFY 382
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ I F L++ CR K V D L+ + NT ++ +++G+C +
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV- 441
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM--------- 237
G A+ + EM G+C +VV+ + ++ L L +F M++
Sbjct: 442 GDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRP 501
Query: 238 --GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G+E D + YN +I L +A L + M +G+ P+ +TY+S+I LCK +LD
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
EA Q FD M + SP + T++ + ++ G E+F M + G TYI
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC---EMGQRGIVADAITYI 618
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
LI F + ++ E+ +G PD + ++ L+ +LE A
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERA 668
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 160/386 (41%), Gaps = 57/386 (14%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV-GIEDFQ 142
A AL+D M P+ +T T+ + C + D A+N + + + +
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTI---VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYN 257
Query: 143 GLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
++ L + DA +L K++FP + ++N ++NG+C I G +AE++ EM
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFP-DIVTYNCMINGFC-ISGRWSDAEQLLQEML 315
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM-------------------------- 234
+R I DVV+FS +I+ + K + L+D+M
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375
Query: 235 ---------KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
G D +N +I + + V D I L+ M E G+ N +TY +LI
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM------ 339
C+ L+ A+ EM+ G+ P + T + LD + ++ LE + M
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 340 --------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
G +P TY +LI +F +++ E+ G PD +Y+++I L
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKT 417
+L+EA Q + M K P+ T
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVT 581
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 155/353 (43%), Gaps = 19/353 (5%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P++VT TLL C + A++ F+ + F L++ LCR V +A
Sbjct: 149 PTVVTFNTLL---HGLCVEDRISEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEA 201
Query: 158 EHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG-ICYDVVSFSCII 215
L+ +D N ++ I++G C + G + A + +M + I +VV ++ II
Sbjct: 202 VALLDRMLEDGLQPNQITYGTIVDGMCKM-GDTVSALNLLRKMEEVSHIIPNVVIYNTII 260
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K LF +M+ I D YN +I+ DA L++ M E+ +
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEV 329
P+VVT+++LI K K EA + +DEML R I P+ TY + +D + E +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380
Query: 330 FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
F L + GC P T+ LI + R ++ + K+ +E++E G + +YT LIH
Sbjct: 381 FYLTPTK---GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437
Query: 390 LFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQ 442
G L A EM + P T L D + ++ + KA Q
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
SF+ ++ C+ L L F ++ ++G +N ++H L + +A+ L M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 270 EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEE 328
PNVVT+ +L+ LC+ ++ EA D ML+ G+ P TY +D + + G+
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 329 V--FGLLESMRKMG-CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
V LL M ++ P Y +I + + + ++ E+ E PD +Y
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I+ ++G+ +A Q EM E+++ P+ T
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVT 325
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+ F ++ + V+ L +M+ + + C+ + ++ + A+S
Sbjct: 81 VIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFG 140
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G P VVT+N+L+ LC ++ EA F +M + P + T+ ++ + R G
Sbjct: 141 KITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREG 196
Query: 327 E--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN-GPDRSSY 383
E LL+ M + G QP TY ++ + + + ++ E + P+ Y
Sbjct: 197 RVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIY 256
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+I L+ +G+ +AH ++EM+EK++ P+ T
Sbjct: 257 NTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 22/262 (8%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G +T Y T+I +V + A L+ EM P++VT TLL C
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL---DGLCDNG 477
Query: 118 DVGRAINAFYAYKRFKFAV-------GIE-DFQG---LLSALCRYKNVQDAEHLM--FCN 164
+ A+ F A ++ K + G+E D Q L+ L +AE L +
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+ + P +T +++ +++G C SR EA +++ M + DVV+F+ +I+ Y KA
Sbjct: 538 RGIVP-DTITYSSMIDGLCK---QSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ L LF +M + GI D Y +I+ K + A+ + + M GV P+ +T
Sbjct: 594 MVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIR 653
Query: 283 SLIKPLCKARKLDEARQAFDEM 304
+++ L +L+ A +++
Sbjct: 654 NMLTGLWSKEELERAVAMLEDL 675
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVF----PFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
LL LC K ++A L+ D P N S++I++NG+ G + +++EM
Sbjct: 167 LLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTE-GQVDKPYNLFLEM 225
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRL 258
RGI DVV+++ +I KA+ + +F QM G + + YN +IH L+ G+
Sbjct: 226 IDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKW 285
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
K+ + +++ M +G+ P+ TY SL+ LCK + EAR FD M+++GI P + TY
Sbjct: 286 -KEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 319 FLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+ T E+ L+ M + G P + + + +++ ++N++ ++G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
P+ +Y ALI AL G++++A + +M + + P
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 442
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 18/407 (4%)
Query: 15 RSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAI 74
R ++ K+ GI + LS + + FL ++G + ++ +
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHS--------FLDLMVENGLSPDHHIFNIFFSA 383
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
K D A + ++MR P++V L I C + V A F
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL---IDALCKLGRVDDAEVKFNQMINEGV 440
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
I F L+ LC + AE L++ ++ + P N FN ++ CN+ G E
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP-NAVFFNTLICNLCNV-GRVMEG 498
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
R+ M G+ D S++ +IS Y + ++FD M +G+ YN ++H
Sbjct: 499 RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
+ DA L + M KGV P VVTYN+++ L + ++ EA++ + M+ G
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618
Query: 313 IRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
I TY+ L+ + +E F + +S+ G Q T+ ++I + + + ++
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
I NG P+ +Y + L G LEE + M++ P +
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 7/321 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLMFCNK 165
I Y + +A++ F ++ + + ++ L+ ALC+ V DAE N+
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P N FN ++ G C + R E V+ EM +GIC + V F+ +I +
Sbjct: 439 GVTP-NIVVFNSLVYGLCTVDKWERAEELVY-EMLDQGICPNAVFFNTLICNLCNVGRVM 496
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ RL D M+ +G+ D Y +I +A + M G++P VTYN+L+
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQ 342
C A ++D+A F EML++G++P + TY+ L + + E L +M G +
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 616
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
TY +++ + FK++ + G + ++T +I AL G+ E+A
Sbjct: 617 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 676
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
+ + L+P T L+ +
Sbjct: 677 FAAIPANGLVPNVVTYRLVAE 697
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 156/370 (42%), Gaps = 10/370 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + + Y +I L K+ + D A ++M P++V +L + C V
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL---VYGLCTV 457
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
RA Y F L+ LC V + L + + V P + S
Sbjct: 458 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP-DAFS 516
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++G+C + G + EAE+V+ M G+ V+++ ++ Y A + LF +M
Sbjct: 517 YTPLISGYC-LTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
R G+ YN ++H L + + +A L +M G ++ TYN ++ LCK+ +
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 635
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
DEA + F + +G+ I T+ + + G E+ L ++ G P TY ++
Sbjct: 636 DEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLV 695
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ +++ + +NG P+ AL+ L G + A Y ++ E+
Sbjct: 696 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 755
Query: 412 LPEPKTDELL 421
E T LL
Sbjct: 756 SVEASTTSLL 765
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ +LN C G REA + M ++GI V ++ +I Y+ L ++ D
Sbjct: 306 TYGSLLNYLCKN-GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDL 364
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G+ D ++N A AK ++ A+ + M + G++PNVV Y +LI LCK +
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
+D+A F++M+ G++P I +++ L + E L+ M G P +
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + ++ + + G PD SYT LI L G+ +EA + + M
Sbjct: 485 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544
Query: 411 LLPEPKT-DELLQDW 424
L P T + LL +
Sbjct: 545 LSPTEVTYNTLLHGY 559
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE---KGVAPNVVTYNSLIK 286
L +M +G D Y ++ L + ++A+ L+ M + + PNVV+Y+ +I
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
++D+ F EM+ RGI P + TY +D + + + G+ + M G +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
N TY LI + ++ V ++ E+S G PD +Y +L++ L NG+ EA ++
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327
Query: 404 MEMKEKQLLPEPKTDELL 421
M K + P+ T +L
Sbjct: 328 DSMIRKGIKPKVSTYGIL 345
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 219 SKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD---AISLMKSMEEK--- 272
S++ L L+LFD++ + +N ++ A+++ R A+S M +
Sbjct: 25 SRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSD 84
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEE 328
VAPN+ TY+ LI C+ L+ AF +L+ G + L + R GE
Sbjct: 85 KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN---GPDRSSYTA 385
+ LL+ M ++GC P +Y +L+K ++ ++ + ++++ P+ SY+
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
+I+ F G++++ + ++EM ++ + P+ T + D Q +R
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDR 252
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 11/264 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I+ + D A + D M P+ VT TLL YC+ + A F
Sbjct: 517 YTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL---HGYCSASRIDDAYCLFR 573
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTK----SFNIILNGWC 183
R G+ + +L L + K +A+ L ++ TK ++NIILNG C
Sbjct: 574 EMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL---NMINSGTKCDIYTYNIILNGLC 630
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
EA +++ + +G+ ++++F+ +I K + LF + G+ +
Sbjct: 631 KS-NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNV 689
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y V L + +++ SL +ME+ G APN N+L++ L + A +
Sbjct: 690 VTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 749
Query: 304 MLQRGISPTIRTYHAFLDIIRTGE 327
+ +R S T + I + E
Sbjct: 750 LDERNFSVEASTTSLLMSIFTSDE 773
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 172/401 (42%), Gaps = 53/401 (13%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+++ ++ K++ + TA +L + P L+T L ILI +C + + +
Sbjct: 61 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT---LNILINCFCHMGQITFGFSVL 117
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIILNGWC 183
+ + L+ LC V+ A H F +K + F N S+ ++NG C
Sbjct: 118 AKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH--FHDKLLAQGFQLNQVSYATLINGVC 175
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
I G +R A ++ ++ R +V +S II K + + + LF +M GI D
Sbjct: 176 KI-GDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y+ +I+ +K+AI L+ M K + PNV TYN L+ LCK K+ EA+
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 304 MLQRGISPTIRTYHAFLDI------IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
ML+ + P + TY +D ++ + VF +M MG P TY +LI F +
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF---NAMSLMGVTPDVHTYTILINGFCK 351
Query: 358 WRQFG---NVFK-----------------------------VWNEISE---NGNGPDRSS 382
+ N+FK VW+ I E G D +
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y++LI L NG L+ A + +MK++++ P T +L D
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 165/365 (45%), Gaps = 10/365 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y T+I + K+ A L+ ++ G T P++ T+ I C V
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI---IDALCKYQLV 215
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A F + + + L+ C +++A L+ K + P N ++NI
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP-NVYTYNI 274
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EA+ V M + + DV+++S ++ Y + K +F+ M M
Sbjct: 275 LVDALCKE-GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D Y +I+ K ++V +A++L K M +K + P +VTY+SLI LCK+ ++
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
DEM RG + TY + +D + + G + L M+ +P T+ +L+
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + + +V+ ++ G + +Y +I+ G LEEA +M++ +P
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 415 PKTDE 419
T E
Sbjct: 514 AFTFE 518
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ L K K A +++ M P ++T TL+ Y V++V +A + F
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM---DGYFLVYEVKKAQHVFN 328
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A + + L++ C+ K V +A +L K++ P +++ +++G C
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLC-- 385
Query: 186 IGSSREAERVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
S VW EM RG DV+++S +I K +L + + LF++MK I +
Sbjct: 386 --KSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
+ ++ L KG +KDA + + + KG NV TYN +I CK L+EA
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503
Query: 303 EMLQRGISPTIRTYHAFL 320
+M G P T+ +
Sbjct: 504 KMEDNGCIPNAFTFETII 521
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 20/348 (5%)
Query: 92 RGGETGPSL--VTKQTLLILIR----RYCAVHDV----GRAINAFYAYKRF---KFAVGI 138
+ GET +L + K L+L+R Y A+ D I+A+ Y K +
Sbjct: 170 KSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNV 229
Query: 139 EDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
F L+ C +++A L+ +V P N +FNI+++G C G ++A V
Sbjct: 230 VTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNP-NVYTFNILIDGLCKE-GEVKKATSVL 287
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M ++G+ +VV+++ ++ Y + ++K +F+ + G+ + Y+ +I+ L K
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
++V +A+ L K M K + PN VTY+SLI LCK+ ++ + DE+ RG I TY
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITY 407
Query: 317 HAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
++ L+ + +V LL M+ G QP TY L+ + + + +++ ++
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC 467
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G + YT +I+ L G +EA +M++ +P+ T E L
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETL 515
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 5/257 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+T + N +L G C + G +EA + ++ D VS+ +I+ K+ L+L
Sbjct: 122 DTVTVNTLLRGLC-LNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQL 180
Query: 231 FDQMK-RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+++ + + D +Y A+I + K +LV DA L M K + PNVVT+NSLI C
Sbjct: 181 LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFC 240
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTND 346
+L EA +EM ++P + T++ +D + + GE + +L M K G +P
Sbjct: 241 IVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVV 300
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY L+ + ++ V+N IS G P+ SY+ +I+ L N ++EA + + EM
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360
Query: 407 KEKQLLPEPKTDELLQD 423
K + P T L D
Sbjct: 361 HLKNMTPNTVTYSSLID 377
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G+V+K A +++ M P++VT +L+ Y V +V +A + F
Sbjct: 278 GEVKK---ATSVLSVMIKQGVEPNVVTYTSLM---DGYFLVKEVNKAKHVFNTISLRGVT 331
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+ + +++ LC+ K V +A L K++ P NT +++ +++G C S
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP-NTVTYSSLIDGLC----KSGRIS 386
Query: 194 RVWM---EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
VW E++ RG ++++++ +++ K + K + L +MK GI+ D Y ++
Sbjct: 387 DVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLV 446
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K +KDA + + + KG N+ Y +I LCK DEA +M G
Sbjct: 447 DGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCM 506
Query: 311 PTIRTYHAFL 320
P TY +
Sbjct: 507 PDAVTYETLI 516
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 5/260 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
+ F+ I+S K + + QM+ GI+ + +N +I+ + + A S++
Sbjct: 53 IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
+ + G P+ VT N+L++ LC K+ EA D ++++ +Y ++ +
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172
Query: 328 EVFGLLESMRK----MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
E L+ +RK + +P Y +I F + + + + +++E+ P+ ++
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQP 443
+LI+ + G+L+EA EM + P T +L D + V++ + L
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292
Query: 444 QSGQNTRVISKKSDQDREFL 463
Q G V++ S D FL
Sbjct: 293 Q-GVEPNVVTYTSLMDGYFL 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAI 123
+T Y ++I L K + W LIDE+ +++T +LL C H V +AI
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLL---NGLCKNHQVDKAI 424
Query: 124 NAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILN 180
K + + L+ LC+ ++DA+ + + C +P N + + +++N
Sbjct: 425 ALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKG--YPLNIRMYTVMIN 482
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C G EA + +M G D V++ +IS K K ++L +M +
Sbjct: 483 GLCK-EGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESD 541
Query: 241 CDRK 244
C K
Sbjct: 542 CSGK 545
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 164/364 (45%), Gaps = 9/364 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ +G + Y +I + A A ++EM P+ T ++I Y +
Sbjct: 219 RAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYS---VIISGYGRL 275
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
DV A F + + ++ A C+ N++ AE +M ++ +
Sbjct: 276 GDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLY 335
Query: 176 NIILNGW--CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N++++G+ C + R ++ G+ VVS+ C+I+ YSK + K L++ ++
Sbjct: 336 NMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNE 395
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M+ GI+ +RK Y+ +I + +A S+ + M G+ P+ +TYN L+ CK +
Sbjct: 396 MEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQ 455
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
++ A + M PT+RTY +D ++ G+ F + M+ G +P+ TY +
Sbjct: 456 MNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNV 515
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
++ ++ Q + +E+ G P+ SYT LI G + A +Y+ +KE
Sbjct: 516 IMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Query: 411 LLPE 414
L P+
Sbjct: 576 LKPD 579
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 16/321 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD- 166
+L+ Y D A AF + + + + L+ A Y QD + C ++
Sbjct: 197 LLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHA---YAVAQDLRGAIACVEEM 253
Query: 167 ----VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
V P N ++++I++G+ + G AER + ++ V ++ II Y KA
Sbjct: 254 EAEGVSP-NAATYSVIISGYGRL-GDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAG 311
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL---MKSMEEKGVAPNVV 279
N+ + + M+ G+E +YN ++ R V +++ +K+ E G++P VV
Sbjct: 312 NMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVV 371
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESM 336
+Y LI K K+D+A Q +EM +GI +TY +D ++ G+ F + E M
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G +P TY +L+ F + Q ++ + P +YT +I G L
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDL 491
Query: 397 EEAHQYYMEMKEKQLLPEPKT 417
A + +MK P T
Sbjct: 492 RMAFETVRDMKMAGFRPSAAT 512
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 151/366 (41%), Gaps = 8/366 (2%)
Query: 53 LWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRR 112
L A ++G + + Y +I + K+ K D A + +EM E ++T ++I
Sbjct: 358 LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEM---EDQGIKHNRKTYSMIIDG 414
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFN 171
Y + D A + F + L++A C+ + A E L P
Sbjct: 415 YVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPT 474
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+++ II++G+ I G R A +M G +++ I+ ++A + + +
Sbjct: 475 LRTYTIIIDGFMKI-GDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASII 533
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
D+M G+ + + Y +I A + A ++E G+ P+V+ Y SL+K CKA
Sbjct: 534 DEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKA 593
Query: 292 RKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTY 348
++ EM G+ Y+ LD + G+ E +++ MR G P +Y
Sbjct: 594 GRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSY 653
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
I + + ++ + G P+ +YT LIH E+A Y EMK
Sbjct: 654 TSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKS 713
Query: 409 KQLLPE 414
++P+
Sbjct: 714 AGMIPD 719
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
EM G+ + ++S IIS Y + ++ R F + + +YN +IHA K
Sbjct: 252 EMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAG 311
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR---GISPTIR 314
++ A ++M +MEE+G+ + YN L+ R +D+ F + R G+SPT+
Sbjct: 312 NMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVV 371
Query: 315 TYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+Y +++ + ++ + M G + TY M+I + + N F V+ ++
Sbjct: 372 SYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
S G PD +Y L++A NG++ A + M+ P +T ++ D
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIID 483
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 165/375 (44%), Gaps = 19/375 (5%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVL-SWVR-NDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K ++ N++E+ GIK + + S ++ +V+ D AF+ F +G Y+ +
Sbjct: 388 KALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF-EDMSNAGIKPDGITYNIL 446
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
+ K + + A L+ M G+ P+L +T I+I + + D+ A K
Sbjct: 447 MNAFCKNGQMNRALELLARMESGDCPPTL---RTYTIIIDGFMKIGDLRMAFETVRDMKM 503
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
F + ++ L + + A ++ V P N +S+ ++ G+ IG
Sbjct: 504 AGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHP-NERSYTTLIEGYA-CIGDM 561
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A + + + + G+ DV++++ ++ KA + L + +M G+ + +YN +
Sbjct: 562 GLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNIL 621
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ A+ + +A +M+ M +G+ P++ +Y S I CKA + +A + ++M Q+G+
Sbjct: 622 LDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGV 681
Query: 310 SPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKF------SRWRQ 360
P ++ Y + + E+ + M+ G P Y ++ +R
Sbjct: 682 QPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETV 741
Query: 361 FGNVFKVWNEISENG 375
F V +V +E+ + G
Sbjct: 742 FDGVLRVTSEMVDQG 756
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 41/253 (16%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +++ Y K + H F+ M+ GIE + Y +IHA A + ++ AI+ ++ ME
Sbjct: 196 TLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEA 255
Query: 272 KGVAPNVVT-----------------------------------YNSLIKPLCKARKLDE 296
+GV+PN T YN++I CKA ++
Sbjct: 256 EGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMER 315
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYIM 350
A M ++G+ T+ Y+ +D + VF L++ + G PT +Y
Sbjct: 316 AEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGC 375
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI +S+ + ++ NE+ + G +R +Y+ +I G A + +M
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 411 LLPEPKTDELLQD 423
+ P+ T +L +
Sbjct: 436 IKPDGITYNILMN 448
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N SFNI++ G N G E +W M + G D +++ ++ + K +++K L +
Sbjct: 58 NVASFNIMMRGLFNN-GKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHV 116
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+ + G D Y+A+I+ L K + A+S++ M + G PN YN+LI L
Sbjct: 117 LEIAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVG 176
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDT 347
+ K ++A + F EM SPTI TY+ ++ + GE E + L++ M + G P T
Sbjct: 177 SSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVIT 236
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y MLIK + ++W +++ G PD + LIH L GK++ A Y +M
Sbjct: 237 YSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMN 296
Query: 408 EKQLLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 297 HWNCAPNLVTHNTLMEGFY 315
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 39/291 (13%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K F ++ ++ I+++G+C G ++ V +G D ++S +I+ K L
Sbjct: 87 KSGFVEDSITYGILVHGFCKN-GDVNKSLHVLEIAEMKGGVLDAFAYSAMINGLCKDSKL 145
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
K + + + M + G + + VYNA+I+ L +DAI + + M +P ++TYN+L
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTL 205
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL------------------------ 320
I LCK + EA EML++G +P + TY +
Sbjct: 206 INGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGF 265
Query: 321 --DIIRTGEEVFGLLE------------SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
DI + GL M C P T+ L++ F + N
Sbjct: 266 KPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALV 325
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+W I NG PD SY + L ++ A + + K+++P T
Sbjct: 326 IWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 27/276 (9%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWAL----IDEMRGGETGPSLVTKQTLLILIRR 112
K+SG+ + Y ++ G + D +L I EM+GG ++ +I
Sbjct: 86 KKSGFVEDSITYGILVH--GFCKNGDVNKSLHVLEIAEMKGG-----VLDAFAYSAMING 138
Query: 113 YCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKD 166
C + +A++ + + L++ L +DA + C+
Sbjct: 139 LCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPT 198
Query: 167 VFPFNTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
+ +NT ++NG C R EA + EM ++G V+++S +I +
Sbjct: 199 IITYNT-----LINGLCK---GERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKV 250
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L+L+ Q+ G + D +++N +IH L ++ A+SL M APN+VT+N+L
Sbjct: 251 EMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTL 310
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
++ K + A + +L+ G+ P I +Y+ L
Sbjct: 311 MEGFYKDGDVRNALVIWARILRNGLQPDIISYNITL 346
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 7/250 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y MI L K K D A ++++ M P+ L+ + D AI F
Sbjct: 132 YSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFED---AIRVFQ 188
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ I + L++ LC+ + +A L+ K P ++++++ G C +
Sbjct: 189 EMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPC-VITYSMLIKGLC-L 246
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
A ++W +++ +G D+ + +I + L L+ M +
Sbjct: 247 CHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVT 306
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+N ++ K V++A+ + + G+ P++++YN +K LC ++ A + L
Sbjct: 307 HNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAL 366
Query: 306 QRGISPTIRT 315
+ I PTI T
Sbjct: 367 TKKIVPTIIT 376
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 156 DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
DA + V P + ++N ++ G C G + A V EM +R DVV+++ ++
Sbjct: 17 DAARRLVAEMPVEP-DAYTYNTLIRGLCGR-GRTANALAVLDEMLRRRCVPDVVTYTILL 74
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + ++L D+M+ G D YN V++ + + V DAI +K++ G
Sbjct: 75 EATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 134
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
PN V+YN ++K LC A + ++A + EM Q+G P + T++ + + R G E +
Sbjct: 135 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 194
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
LE + K GC P + +Y L+ F + ++ + + G PD SY L+ AL
Sbjct: 195 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 254
Query: 393 NGKLEEAHQYYMEMKEKQLLP 413
+G+++ A + ++K+K P
Sbjct: 255 SGEVDVAVELLHQLKDKGCAP 275
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 18/363 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L + A A++DEM P +VT IL+ C +A+
Sbjct: 35 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT---ILLEATCKRSGYKQAMKLLD 91
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF----NTKSFNIILNGWC 183
+ I + +++ +C+ V DA + K++ + NT S+NI+L G C
Sbjct: 92 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL---KNLPSYGCEPNTVSYNIVLKGLC 148
Query: 184 NIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
+ R +AE + EM Q+G +VV+F+ +IS + + L + +Q+ + G
Sbjct: 149 T---AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 205
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YN ++HA K + + A++ + M +G P++V+YN+L+ LC++ ++D A +
Sbjct: 206 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 265
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
++ +G +P + +Y+ +D + + G +E LL M G QP TY + R
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTD 418
+ + + + ++ + G P+ Y A+I L + A + M +P T
Sbjct: 326 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 385
Query: 419 ELL 421
+L
Sbjct: 386 TIL 388
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 132/328 (40%), Gaps = 43/328 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++ K + A L+DEMR P +VT +++ C V AI
Sbjct: 70 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYN---VVVNGICQEGRVDDAIEFLK 126
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
+ + +L LC + +DAE LM + P N +FN++++ C
Sbjct: 127 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK- 185
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G A V ++ + G + +S++ ++ + K + + K + D M G D Y
Sbjct: 186 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 245
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N ++ AL + V A+ L+ +++KG AP +++YN++I L KA K EA + +EM+
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 305
Query: 307 RGISPTIRTYHAFL------DIIRTGEEVFG----------------------------- 331
+G+ P I TY D I FG
Sbjct: 306 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 365
Query: 332 ---LLESMRKMGCQPTNDTYIMLIKKFS 356
L M GC P TY +LI+ +
Sbjct: 366 AIDLFAYMIGNGCMPNESTYTILIEGLA 393
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 24/345 (6%)
Query: 7 ILREFSHKRS----------EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG 56
IL E + KRS EMR+K I + +V+ + R D F L
Sbjct: 72 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL--- 128
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
G +T Y+ ++ L +++ A L+ EM P++VT +LI C
Sbjct: 129 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN---MLISFLCRK 185
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
V A+ ++ + LL A C+ K + A + ++ +P + S
Sbjct: 186 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVS 244
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +L C G A + ++ +G ++S++ +I +KA + L L ++M
Sbjct: 245 YNTLLTALCRS-GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G++ D Y+ + L + ++DAI +++ G+ PN V YN++I LCK R+
Sbjct: 304 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM 339
A F M+ G P TY ++ G GL++ R +
Sbjct: 364 HSAIDLFAYMIGNGCMPNESTYTILIE----GLAYEGLIKEARDL 404
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 8/265 (3%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WE A G Q G + ++ +I+ L + + A +++++ P+ ++
Sbjct: 153 WEDAEELMGEMG-QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 164
LL +C + +A+ I + LL+ALCR V A L+
Sbjct: 212 PLL---HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268
Query: 165 KD--VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
KD P S+N +++G G ++EA + EM +G+ D++++S I + +
Sbjct: 269 KDKGCAPV-LISYNTVIDGLTKA-GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 326
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ +R F +++ MGI + +YNA+I L K R AI L M G PN TY
Sbjct: 327 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 386
Query: 283 SLIKPLCKARKLDEARQAFDEMLQR 307
LI+ L + EAR DE+ R
Sbjct: 387 ILIEGLAYEGLIKEARDLLDELCSR 411
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
YNA++ + A L+ M V P+ TYN+LI+ LC + A DEML
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 306 QRGISPTIRTYHAFLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+R P + TY L+ R+G ++ LL+ MR GC P TY +++ + +
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
+ + + G P+ SY ++ L + E+A + EM +K P T +L
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 423 DWSYNKQFVERQIASLKAHQPQSGQNTRVIS-----------KKSDQDREFLQ 464
+ K VE + L+ P+ G +S KK D+ FL
Sbjct: 180 SFLCRKGLVEPALEVLE-QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 170/398 (42%), Gaps = 45/398 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + ++ Y+T+I K + D A L+ EM G + V + + +I C+ H
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEML--SIGFN-VNQGSFTSVICLLCSHHMF 443
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
A+ + G L+S LC++ A L F NK F +TK+ N
Sbjct: 444 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG-FLVDTKTSNA 502
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G C G E R+ E+ RG D VS++ +IS + L + D+M +
Sbjct: 503 LLHGLCEA-GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G++ D Y+ +I L V++AI + G+ P+V TY+ +I CKA + +E
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621
Query: 298 RQAFDEML-----------------------------------QRGISPTIRTYHAF--- 319
++ FDEM+ +GISP TY +
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681
Query: 320 LDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ II EE LLE MR G +P Y LI + + Q V + E+ P+
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 741
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +YT +I +G + EA + EM+EK ++P+ T
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSIT 779
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 7/266 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ L+S C K + +A M K + P N +++I++ G N+ EA + W +
Sbjct: 535 YNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNY-TYSILIRGLLNM-NKVEEAIQFWGD 592
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
+ G+ DV ++S +I KA + +LFD+M ++ + VYN +I A +
Sbjct: 593 CKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGR 652
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ A+ L + M+ KG++PN TY SLIK + +++EA+ +EM G+ P + Y A
Sbjct: 653 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTA 712
Query: 319 FLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
+D + G+ +V LL M P TY ++I ++R ++ +E+ E G
Sbjct: 713 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKG 772
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQ 401
PD +Y I+ G + +A +
Sbjct: 773 IVPDSITYKEFIYGYLKQGGVLQAFK 798
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 20/367 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTKQTLLILIRRYC 114
+++G + Y+T+I LG ++D A+ ++M RG E P+L+T IL++
Sbjct: 279 EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE--PTLITYS---ILVKGLT 333
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-----FP 169
+G A F + + L+ +L ++ A + KD+
Sbjct: 334 KAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI----KDLMVSKGLS 389
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++N ++ G+C G + AER+ EM G + SF+ +I LR
Sbjct: 390 LTSSTYNTLIKGYCK-SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALR 448
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+M + + +I L K A+ L KG + T N+L+ LC
Sbjct: 449 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLC 508
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTND 346
+A KL+E + E+L RG +Y+ + + +E F ++ M K G +P N
Sbjct: 509 EAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNY 568
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY +LI+ + + W + NG PD +Y+ +I + EE + + EM
Sbjct: 569 TYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628
Query: 407 KEKQLLP 413
L P
Sbjct: 629 MSNNLQP 635
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 144 LLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
LL++L R Q E K V P + F +N +C G EA ++ +M +
Sbjct: 224 LLTSLVRATEFQKCCEAFHVVCKGVSP-DVYLFTTAINAFCKG-GKVEEAIELFSKMEEA 281
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G+ +VV+++ +I + + ++M G+E Y+ ++ L K + + DA
Sbjct: 282 GVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDA 341
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-D 321
++K M EKG PNV+ YN+LI L +A L++A + D M+ +G+S T TY+ +
Sbjct: 342 YCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 401
Query: 322 IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
++G+ LL+ M +G ++ +I F + + E+ P
Sbjct: 402 YCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPG 461
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
T LI L +GK +A + +++ K L + KT L
Sbjct: 462 GGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 154/365 (42%), Gaps = 18/365 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ + Y+ +I L + + A + D M G SL T T LI+ YC
Sbjct: 350 EKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMV--SKGLSL-TSSTYNTLIKGYCKSG 406
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-----EHLMFCNKDVFPFNT 172
A F V F ++ LC + A E L+ +++ P
Sbjct: 407 QADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLL---RNMSP-GG 462
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+++G C G +A +W++ +G D + + ++ +A L + R+
Sbjct: 463 GLLTTLISGLCKH-GKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQK 521
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
++ G DR YN +I + + +A M M +KG+ P+ TY+ LI+ L
Sbjct: 522 EILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMN 581
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTY 348
K++EA Q + + + G+ P + TY +D RT EE L + M QP Y
Sbjct: 582 KVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT-EEGQKLFDEMMSNNLQPNTVVY 640
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
LI + R + ++ ++ G P+ ++YT+LI + + ++EEA EM+
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700
Query: 409 KQLLP 413
+ L P
Sbjct: 701 EGLEP 705
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPL--------------------------------- 288
A+ + + KG+ P+ T N L+ L
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINA 261
Query: 289 -CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT 344
CK K++EA + F +M + G+ P + TY+ +D + +E F E M + G +PT
Sbjct: 262 FCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPT 321
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY +L+K ++ ++ G+ + V E++E G P+ Y LI +L G L +A +
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKD 381
Query: 405 EMKEKQL-LPEPKTDELLQDWSYNKQ 429
M K L L + L++ + + Q
Sbjct: 382 LMVSKGLSLTSSTYNTLIKGYCKSGQ 407
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 40/280 (14%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y+T+I+ +K D A+ +DEM P T ILIR ++ V
Sbjct: 527 GFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPD---NYTYSILIRGLLNMNKV 583
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
AI + KR + + ++ C+ + ++ + L + ++ P NT +N
Sbjct: 584 EEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP-NTVVYNH 642
Query: 178 ILNGWC----------------------------------NIIGSSREAERVWMEMSQRG 203
++ +C +II EA+ + EM G
Sbjct: 643 LIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEG 702
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ +V ++ +I Y K + KV L +M + ++ Y +I A+ V +A
Sbjct: 703 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 762
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
L+ M EKG+ P+ +TY I K + +A + DE
Sbjct: 763 RLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 5/257 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G ++A M G +VVS++ II YS N+ R+ D M+ GIE D Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++I + K +++A L M E G+ PN VTYN+LI C L+ A DEM++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 307 RGISPTIRTY----HAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFG 362
+GI P++ TY HA R G E +++ MRK G P TY +LI +SR
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMG-EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQ 422
F + NE+ G P +YT+LI+ L +++EA + ++ ++ + P+ +
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425
Query: 423 DWSYNKQFVERQIASLK 439
D VER LK
Sbjct: 426 DGHCANGNVERAFMLLK 442
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 167/344 (48%), Gaps = 10/344 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L A + G + Y ++I+ + K + + A L D+M P+ VT TL I
Sbjct: 230 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL---ID 286
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFP 169
YC D+ RA + + + + L+ AL + +A+ ++ K + P
Sbjct: 287 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 346
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ ++NI++NG+ G+++ A + EM +GI V+++ +I S+ + +
Sbjct: 347 -DAITYNILINGYSRC-GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 404
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF+++ G+ D ++NA+I V+ A L+K M+ K V P+ VT+N+L++ C
Sbjct: 405 LFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 464
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTGE--EVFGLLESMRKMGCQPTND 346
+ K++EAR DEM RGI P +Y+ + R G+ + F + + M +G PT
Sbjct: 465 REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLL 524
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
TY LIK + ++ ++ E+ G PD S+Y +LI +
Sbjct: 525 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D E AF++ K+ G S Y+ ++ L + A +I EMR P +
Sbjct: 291 KGDLERAFSYRDEMVKK-GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 349
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDA 157
T ILI Y G A AF + + GIE + L+ L R +++A
Sbjct: 350 TYN---ILINGYSRC---GNAKRAFDLHNEM-LSKGIEPTHVTYTSLIYVLSRRNRMKEA 402
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM---EMSQRGICYDVVSFS 212
+ L ++ V P + FN +++G C ++ ER +M EM ++ + D V+F+
Sbjct: 403 DDLFEKILDQGVSP-DVIMFNAMIDGHC----ANGNVERAFMLLKEMDRKSVPPDEVTFN 457
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
++ + + + L D+MK GI+ D YN +I + +KDA + M
Sbjct: 458 TLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
G P ++TYN+LIK LCK ++ D A + EM+ +GISP TY + ++
Sbjct: 518 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 172/400 (43%), Gaps = 42/400 (10%)
Query: 17 EMRNKIEECGIKVSSELVSEV-LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAIL 75
++ ++ E I + EL E+ LS R +++ F L GK L
Sbjct: 147 QLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGK-----------------L 189
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
K R+F I M G P++V+ T++ + R ++A R K
Sbjct: 190 KKAREF------IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM----RVK-- 237
Query: 136 VGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSS 189
GIE + L+S +C+ +++A L + P N ++N +++G+CN G
Sbjct: 238 -GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDGYCNK-GDL 294
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
A EM ++GI V +++ ++ + + + +M++ GI D YN +
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+ ++ K A L M KG+ P VTY SLI L + ++ EA F+++L +G+
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Query: 310 SPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SP + ++A +D E F LL+ M + P T+ L++ R +
Sbjct: 415 SPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 474
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
+ +E+ G PD SY LI G +++A EM
Sbjct: 475 LLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 4/256 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
SFNI++ G + EA +W M++ G D V++ ++ + K ++K L + +
Sbjct: 61 SFNIMMRGLFDN-RKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
++ G D Y+A+I+AL K ++ A+S++ M G PN YN+LIK L A K
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIM 350
D+A + F EM P I TY +D + GE E + L++ M + G P+ TY +
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSL 239
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+K + ++WN++++ G PD + LIH L GK + A Y++M
Sbjct: 240 LMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWN 299
Query: 411 LLPEPKTDELLQDWSY 426
P T L + Y
Sbjct: 300 CAPNLVTQNTLMEGFY 315
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +LNG+ G ++ +W M + G V SF+ ++ R + + + +++ M
Sbjct: 28 YNAMLNGFYRA-GRMKDCFELWEMMGREG-SRSVASFNIMMRGLFDNRKVEEAMSIWELM 85
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G D Y ++H K + ++ +++ E+KG + Y+++I LCK KL
Sbjct: 86 TKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKL 145
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---CQPTNDTYIML 351
++A + M++ G P Y+A + + + + R+MG C P TY +L
Sbjct: 146 EKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSIL 205
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + +FG + + E+ E G P +Y+ L+ L L K+E A Q + ++ +K
Sbjct: 206 IDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGF 265
Query: 412 LPEPKTDELL 421
P+ + +L
Sbjct: 266 KPDVQMHNIL 275
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 129/319 (40%), Gaps = 40/319 (12%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
+ F ++ L + V++A + K F ++ ++ I+++G+C G ++ +
Sbjct: 59 VASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKN-GYINKSLHIL 117
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
Q+G D ++S +I+ K L K + + + M R G + + VYNA+I L
Sbjct: 118 EIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGA 177
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
DA+ + + M PN+ TY+ LI LCK + EA EML++G++P++ TY
Sbjct: 178 SKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITY 237
Query: 317 HAFLDIIRTGEEV--------------------------------------FGLLESMRK 338
+ + G +V L M +
Sbjct: 238 SLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNR 297
Query: 339 MGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEE 398
C P T L++ F + N +W I +N PD SY + L ++ +
Sbjct: 298 WNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISD 357
Query: 399 AHQYYMEMKEKQLLPEPKT 417
A + + K+++P T
Sbjct: 358 AIWFLHDAVRKKIIPTKIT 376
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R++ + + D VYNA+++ + +KD L + M +G + +V ++N +++ L
Sbjct: 11 RVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREG-SRSVASFNIMMRGL 69
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTY----HAF---------LDIIRTGEEVFGLLES 335
RK++EA ++ M + G TY H F L I+ E+ G+L++
Sbjct: 70 FDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDA 129
Query: 336 -------------------------MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
M + GC+P Y LIK + + +++ E
Sbjct: 130 FAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFRE 189
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ P+ ++Y+ LI L + EA+ EM EK L P T LL
Sbjct: 190 MGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLL 240
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 9/279 (3%)
Query: 37 VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
V + +N + L +Q G Y MI L K K + A ++++ M
Sbjct: 101 VHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGC 160
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
P+ L I+ A+ F I + L+ LC+ + +
Sbjct: 161 KPNTHVYNAL---IKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGE 217
Query: 157 AEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSRE-AERVWMEMSQRGICYDVVSFSC 213
A L+ K + P + ++++++ G C +G E A ++W +++++G DV +
Sbjct: 218 AYDLVKEMLEKGLNP-SVITYSLLMKGLC--LGHKVEMALQLWNQVTKKGFKPDVQMHNI 274
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
+I L L+ M R + N ++ K V++A+ + + +
Sbjct: 275 LIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILKNE 334
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
+ P++++YN +K LC ++ +A + +++ I PT
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPT 373
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+SG +T Y+ +I L K D A + EM + P++ T ILI C
Sbjct: 157 RSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYS---ILIDGLCKGE 213
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFN 176
G A + + + L+ LC V+ A L K F + + N
Sbjct: 214 RFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHN 273
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+++G C++ G ++ A ++++M++ ++V+ + ++ + K N+ L ++ ++ +
Sbjct: 274 ILIHGLCSV-GKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNALVIWARILK 332
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
++ D YN + L + DAI + K + P +T
Sbjct: 333 NELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPTKIT 376
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTN 345
C++ +D A + + ++++ +SP Y+A L+ R G ++ F L E M + G +
Sbjct: 1 CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSVA 60
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
IM+ F R+ +W ++++G D +Y L+H NG + ++ + +E
Sbjct: 61 SFNIMMRGLFDN-RKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKS-LHILE 118
Query: 406 MKEKQ 410
+ E++
Sbjct: 119 IAEQK 123
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 160/371 (43%), Gaps = 26/371 (7%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G+ T Y +I L + + A+ L EM+G P + T ILI +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT---ILIDCFSKAGI 539
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFN 176
+ +A N R + + L+ A + K V A L + K FP N ++
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYT 598
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSK 220
+++G+C G+ +A +++ M DV V++ ++ K
Sbjct: 599 ALIDGYCKS-GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + L + M G E + VY+A+I K + +A + M E+G PNV T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMR 337
Y+SLI L K ++LD + +ML+ +P I Y +D + +E + L+ M
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ GC+P TY +I F + + +++ E+ G P+ +YT LI+ G L+
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837
Query: 398 EAHQYYMEMKE 408
EA+ EMK+
Sbjct: 838 EAYALLEEMKQ 848
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 166/374 (44%), Gaps = 36/374 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y T+I K +K A L + M P+++T L I YC
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL---IDGYCKSG 608
Query: 118 DVGRAINAFYAYKRFKFAVGIED-------------------FQGLLSALCRYKNVQDAE 158
++ +A Y R + I D + L+ LC+ V+DA
Sbjct: 609 NIEKACQI---YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665
Query: 159 HL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L MF D NT ++ +++G+C EA+ V+ +M +RG +V ++S +I
Sbjct: 666 DLLETMFV--DGCEPNTIVYDALIDGFCKA-AKLDEAQEVFHKMVERGYNPNVYTYSSLI 722
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + L VL++ +M + +Y +I L+K +A LM MEEKG
Sbjct: 723 DRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
PNVVTY ++I KA K+D+ + F EM +G +P TY ++ TG +E + L
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL 842
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
LE M++ +Y +I+ + R+F + E+ +NG+ P Y LI
Sbjct: 843 LEEMKQTYWPKHVSSYCKVIEGYK--REFILSLGLLEEVEKNGSAPTILLYKVLIDNFVK 900
Query: 393 NGKLEEAHQYYMEM 406
G+LE A + + E+
Sbjct: 901 AGRLEVALELHKEV 914
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 38/376 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG------- 120
+++++ K F A+ L+ +M E P V ILI C+ ++
Sbjct: 381 FNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYN---ILIGSICSGGELPGPVTFEL 437
Query: 121 --RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
+A N + V + F L +++ H M N F +T +++ +
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG--FVPDTSTYSEV 495
Query: 179 LNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ CN +SR A ++ EM G+ DV +++ +I C+SKA + + D+M R
Sbjct: 496 IGFLCN---ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G E Y +IHA K + V A L + M KG PNV+TY +LI CK+ +++
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 612
Query: 297 ARQAFDEM--------------LQRGIS--PTIRTYHAFLDIIRTGEEV---FGLLESMR 337
A Q + M ++ ++ P + TY A +D + +V LLE+M
Sbjct: 613 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 672
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC+P Y LI F + + +V++++ E G P+ +Y++LI LF + +L+
Sbjct: 673 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLD 732
Query: 398 EAHQYYMEMKEKQLLP 413
+ +M E P
Sbjct: 733 LVLKVLSKMLENSCAP 748
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 175/423 (41%), Gaps = 51/423 (12%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
K++ +LV E+LS++++ E FFLWAG+Q GY H+ Y ++ + +
Sbjct: 135 KLNPDLVVEILSFLKSP-ELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEF 193
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGRAINAFYAYKRFKFAVGIED 140
+ E+RG + V + L +LIR+ C A+ ++GR + Y R + ++
Sbjct: 194 LREIRGDDKE---VLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQV 250
Query: 141 F------------------QGL----------LSALCRYKNVQDAEHLMFCNKDVFPFNT 172
F GL ALC+ ++A L+ K+ F NT
Sbjct: 251 FLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI--EKEDFVPNT 308
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+N +++G C EA M +V ++ ++ + L + R+
Sbjct: 309 ILYNKMISGLCE-ASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILS 367
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G ++N+++HA K A L+K ME+ P V YN LI +C
Sbjct: 368 MMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGG 427
Query: 293 KL------DEARQAFDEMLQRGI---SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
+L + A +A++EML G + ++ L E+ + ++ M G P
Sbjct: 428 ELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVP 487
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +I + N F ++ E+ G PD +YT LI G +++AH +
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547
Query: 404 MEM 406
EM
Sbjct: 548 DEM 550
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 86/227 (37%), Gaps = 73/227 (32%)
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+ + EA ++ + M ++G +VV+++ +I + KA + K L LF +M G +
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 246 YNAVI-HALAKGRLVKD--------------------------------AISLMKSMEEK 272
Y +I H A G L + ++ L++ +E+
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKN 882
Query: 273 GVAPNVVTYNSLIKPLCKA-------------------------------------RKLD 295
G AP ++ Y LI KA K+D
Sbjct: 883 GSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKID 942
Query: 296 EARQAFDEMLQRGISPTIRTY-HAFLDIIRTG--EEVFGLLESMRKM 339
A + F +M++ G+ P + T+ H + +IR EE L +S+ +M
Sbjct: 943 HAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQM 989
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 17/282 (6%)
Query: 144 LLSALCRYKNVQDAEHLM--------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
LL +LC A+ L+ C+ DV +NT +++G+ G +A +
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT-----VIDGFFKE-GDVNKACDL 243
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM QRGI D+V++S ++ KAR + K QM G+ D YN +I+ +
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
K+A+ + K M + + P+VV N+L+ LCK K+ EAR FD M +G +P + +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363
Query: 316 YHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y L+ T ++ L + M G P T+ +LIK ++ ++NE+
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++G P +Y +I AL GK+++A + + +M ++ ++P+
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 20/348 (5%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V
Sbjct: 92 AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S+NI+L CN G S +A+
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYNILLKSLCNQ-GKSGQADD 205
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C DVV+++ +I + K +++K LF +M + GI D Y++V+HA
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L K R + A + ++ M KGV P+ TYN+LI + EA + F EM ++ I P
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325
Query: 313 IRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ + + + + G+ E + ++M G P +Y +++ ++ ++ +++
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +G PD ++ LI A G L++A + EM++ + P T
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT 433
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P + T +LI+ Y + +A+ F + + + +++
Sbjct: 383 LFDLMLGDGIAPDIYTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + +++ ++ G+C GS +A+ + E+ G+
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVP-DKYAYHCLIQGFCTH-GSLLKAKELISEIMNNGM 497
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V F II+ K + +FD +G+ D VYN ++ ++ A+
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PNVV Y +L+ CK ++DE F EMLQ+GI P+ Y+ +D +
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
G V ++ M + G TY ++++ + R F ++ E+ D
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +I +F ++EEA + + L+P
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 178/466 (38%), Gaps = 82/466 (17%)
Query: 26 GIKVSSELVSEVLSWV--RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDT 83
G++V + + S +L + A L + G Y+ ++ L K
Sbjct: 143 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 202
Query: 84 AWALIDEMRGGET--GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A L+ M G T P +V T+ I + DV +A + F + + +
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTV---IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259
Query: 142 QGLLSALCRYKNVQDAEHLM--FCNKDVFPFN---------------------------- 171
++ ALC+ + + AE + NK V P N
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319
Query: 172 ------TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ N ++ C G +EA V+ M+ +G DV S++ +++ Y+ L
Sbjct: 320 QSILPDVVALNTLMGSLCKY-GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ LFD M GI D +N +I A A ++ A+ + M + GV P+VVTY ++I
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-------------------------- 319
LC+ K+D+A + F++M+ +G+ P YH
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498
Query: 320 LDIIRTGEEVFGLLESMRKM------------GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
LDI+ G + L + R M G P Y ML+ + + +V
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
++ + G P+ Y L++ G+++E + EM +K + P
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 45/316 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y T+IA L ++ K D A ++M P K LI+ +C + +A
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD---KYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNI 185
+ I F +++ LC+ V DA+++ + N + P + +N++++G+C +
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP-DAVVYNMLMDGYC-L 548
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
+G +A RV+ M GI +VV + +++ Y K + + L LF +M + GI+ +
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 246 YNAVI-----------------------------------HALAKGRLVKDAISLMKSME 270
YN +I L K R +AI L K +
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--E 327
V +++T N++I + + R+++EA+ F + + G+ P TY + ++++ G E
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVE 728
Query: 328 EVFGLLESMRKMGCQP 343
E + SM+ GC+P
Sbjct: 729 EAEDMFSSMQNAGCEP 744
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L G+C + + + + G DV S++ ++ + L M
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 238 GIEC--DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G C D YN VI K V A L K M ++G+ P++VTY+S++ LCKAR +D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
+A +M+ +G+ P TY+ + TG+ E + + MR+ P L+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
++ + V++ ++ G PD SYT +++ G L + + M +
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 413 PEPKTDELL 421
P+ T +L
Sbjct: 394 PDIYTFNVL 402
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
+L+ YC V + +A+ F A + + L++ C+ + + L K
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P +T +NII++G G + A+ + EM++ GI + ++S ++ K R
Sbjct: 601 GIKP-STILYNIIIDGLFEA-GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+ + LF +++ M ++ D N +I + + R V++A L S+ G+ P VTY+ +I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTY-HAFLDIIRTGEEV 329
L K ++EA F M G P R H ++++ E V
Sbjct: 719 TNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 763
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 169/356 (47%), Gaps = 16/356 (4%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D+ A W + + + + ++ M+ + + +FD A L+D MR + P LV+
Sbjct: 40 DYPLADPSVRWPHLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSF 99
Query: 104 QTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EH 159
T LI R G A+ + ++ + L+SA + N+ DA E
Sbjct: 100 NT-LINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEE 158
Query: 160 LMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
++ C D++ +N + ++G C G ++EAE ++ E+ ++G D V+++ ++
Sbjct: 159 MIASECRPDLWTYNAM---VSVHGRC---GKAQEAELMFKELVEKGFQPDAVTYNSLLYA 212
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
++K ++ +V R+ +++ + G D YN +IH K + A+ L M G P+
Sbjct: 213 FAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD 272
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLE 334
VTY L+ L K ++ EA + +EM G+ PT+ T+ A + ++G ++ +
Sbjct: 273 AVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 332
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M + G +P Y++++ F+R + + ++ + ++G PD Y L+ AL
Sbjct: 333 RMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAAL 388
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 13/297 (4%)
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNG--- 181
+ + RF ++ F ++ R DA L+ ++D+ P + SFN ++N
Sbjct: 50 WPHLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEP-DLVSFNTLINARAK 108
Query: 182 -WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
C G + E + E+ Q G+ D ++++ +IS S+ NL + +F++M
Sbjct: 109 SGCLAAGVALE---LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECR 165
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D YNA++ + ++A + K + EKG P+ VTYNSL+ K ++ +
Sbjct: 166 PDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERV 225
Query: 301 FDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+E+++ G TY+ + + + G + GL + MR +GC P TY +L+ +
Sbjct: 226 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 285
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ KV E+++ G P +++ALI A +G+ ++A + + M E + P+
Sbjct: 286 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPD 342
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD--AISL 265
V F+ ++ Y+++ +L D M+ IE D +N +I+A AK + A+ L
Sbjct: 61 VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALEL 120
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-R 324
+ + + G+ P+ +TYN+LI + LD+A F+EM+ P + TY+A + + R
Sbjct: 121 LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGR 180
Query: 325 TG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
G +E + + + + G QP TY L+ F++ V +V E+ + G D +
Sbjct: 181 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 240
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y +IH G+L+ A Y EM+ P+ T +L D
Sbjct: 241 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVD 281
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 133/338 (39%), Gaps = 41/338 (12%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ D + ++ E++ + ++K T+L+++ + DV + + K + +
Sbjct: 672 RLDELYVVVQELQDLDIK---ISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMH 728
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
++ ++S LC K +D E ++ EM
Sbjct: 729 LYRIMISLLCHNKRFRDVELMV-----------------------------------AEM 753
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
G D+V + ++ Y+ N + + ++ + G+E D YN +I ++
Sbjct: 754 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 813
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++ +L+ M ++G+ P + +Y L+ KA+ ++A F+EM +G YH
Sbjct: 814 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 873
Query: 320 LDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ I R + LL +M++ G +PT T +L+ + KV N + +
Sbjct: 874 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 933
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y+ ++ A N +EMK + P+
Sbjct: 934 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPD 971
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 144/360 (40%), Gaps = 42/360 (11%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAILGKV 78
++++ IK+S V +L + ++ G K +GY + Y MI++L
Sbjct: 681 QELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 740
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
++F ++ EM G P LV TLL++ Y + R I +++ G+
Sbjct: 741 KRFRDVELMVAEMEGAGFKPDLVVLNTLLLM---YTGTGNFDRTIEVYHSI----LEAGL 793
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
E + + L ++ +++ P E + E
Sbjct: 794 EPDEDTYNTL-----------IVMYSRNFRP--------------------EEGFTLLYE 822
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +RG+ + S+ +++ KA+ + LF++M+ G +R +Y+ ++ R
Sbjct: 823 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 882
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A L+ +M+E G+ P + T + L+ + DEA + + + + + Y
Sbjct: 883 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYST 942
Query: 319 FLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
LD +R + G+ L M++ G +P + + I+ S Q + + + + G
Sbjct: 943 VLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1002
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ ++KA ++ +V+++++ MK G + +Y +I L + +D ++ ME G
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 757
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVF 330
P++V N+L+ D + + +L+ G+ P TY+ + + EE F
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL M K G P ++Y +L+ + + + ++ E+ G +RS Y ++ +
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMK-I 876
Query: 391 FLNGKLEEAHQYYME-MKEKQLLPEPKTDELL 421
+ N + ++ + MKE + P T +L
Sbjct: 877 YRNARNHSKAEHLLSAMKEDGIEPTIATMHIL 908
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 52/290 (17%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q+G Y+T+I+ + D A A+ +EM E P L T ++ +V
Sbjct: 125 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMV-------SV 177
Query: 117 HD-VGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN-------- 164
H G+A A +K F + LL A + +V+ E + C
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERV--CEELVKAGFR 235
Query: 165 KDVFPFNTK------------------------------SFNIILNGWCNIIGSSREAER 194
KD +NT ++ ++++ + S EA +
Sbjct: 236 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS-EAGK 294
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
V EM+ G+ +V+FS +I Y+K+ R FD+M G++ DR Y ++ A
Sbjct: 295 VLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFA 354
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ + + L ++M + G P+ Y L+ L K + DE +M
Sbjct: 355 RSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGEEVFG--- 331
P V +N+++ ++ + D+ARQ D M + I P + +++ ++ ++G G
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 332 -LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL +R+ G +P TY LI S+ + V+ E+ + PD +Y A++
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT 417
GK +EA + E+ EK P+ T
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVT 205
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 9/213 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM--GIE----CDRKVYNAVIHALAKGRLVKDAISLMK 267
I+SC + L+L+ Q + G++ DR+++NA+IHA A+ L + A ++
Sbjct: 587 ILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFD 646
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M +KG P V + N +++ L +LDE E+ I + T L+
Sbjct: 647 IMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 706
Query: 328 EVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+VF +++ M+ G P Y ++I ++F +V + E+ G PD
Sbjct: 707 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 766
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L+ G + + Y + E L P+ T
Sbjct: 767 TLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDT 799
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 144/366 (39%), Gaps = 50/366 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G+ Y+TMI + GK+ + D A L DEMR P VT L+ + + +
Sbjct: 231 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 290
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ G+ + G++ SAL C Y KS
Sbjct: 291 EAGKVLEEMAD-------AGLKPTLVTFSALICAY--------------------AKS-- 321
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
G +AER + M + G+ D +++ ++ ++++ K++ L+ M +
Sbjct: 322 ----------GRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIK 371
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D +Y ++ ALAKG + +++ ME +V + LIK C ++
Sbjct: 372 DGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASL 431
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTN---DTYIM 350
++A +G P ++ + LD + E+ LLE +R+ N + IM
Sbjct: 432 LKRA----CLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIM 487
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ K + + + G D Y LI L EA Q + +M+
Sbjct: 488 LLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLG 547
Query: 411 LLPEPK 416
++P K
Sbjct: 548 IVPSQK 553
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 182/402 (45%), Gaps = 23/402 (5%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
+++FF+W HS + MI IL K + F TA L+D++ E S + ++L+
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLV 122
Query: 108 ---------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
L+ Y + +I F + ++ LL++L + +
Sbjct: 123 GGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK-Q 181
Query: 153 NVQDAEHLMFCN--KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+ D +F K N +N++++ C+ G +AE++ EM ++G+ D+ +
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHA-CSKSGDPEKAEKLLSEMEEKGVFPDIFT 240
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +IS Y K + L + D+M+R G+ + YN+ IH ++ +++A L + ++
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--E 327
+ V N VTY +LI C+ +DEA + + M RG SP + TY++ L + G
Sbjct: 301 DD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E LL M +P N T LI + + + KV ++ E+G D SY ALI
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQ 429
H +LE A + M EK P T L D YN+
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 15/298 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I++ K A ++ D M P++VT + + R GR A
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSRE------GRMREATR 294
Query: 128 AYKRFKFAVGIE--DFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCN 184
++ K V + L+ CR ++ +A L F ++N IL C
Sbjct: 295 LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G REA R+ EMS + I D ++ + +I+ Y K ++ +++ +M G++ D
Sbjct: 355 D-GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
Y A+IH K +++A + SM EKG +P TY+ L+ K DE + +E
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 305 LQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWR 359
+RG+ + Y + I E+V L ESM K G D+ I ++ WR
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL--VGDSVIFTTMAYAYWR 529
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 43/300 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++SG A + Y++ I + + A L E++ T + T LI YC +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV----TYTTLIDGYCRM 320
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+D+ A+ + F+ G+ + +L LC +++A L+ K + P N +
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNI-T 379
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH--------- 225
N ++N +C I A +V +M + G+ D+ S+ +I + K L
Sbjct: 380 CNTLINAYCKI-EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 226 --------------------------KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++ +L ++ ++ G+ D +Y +I + K V
Sbjct: 439 IEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQV 498
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A L +SME+KG+ + V + ++ + K+ EA FD M R + ++ Y +
Sbjct: 499 DYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 5/230 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+ ++N +++G+C G+ + + EM + GI V+F +I+ Y K N +
Sbjct: 160 SVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAV 219
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
R+F++MK+ GI YN++I L V++ + LM+ ME+ G++PN +T+ ++K
Sbjct: 220 RVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGF 279
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTN 345
CK + +A D M +R + P + Y+ +D+ R E+ + E+M K G P
Sbjct: 280 CKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNV 339
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
TY LI FSR + + + +E+ E G D +Y LI AL G+
Sbjct: 340 TTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 389
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 16/238 (6%)
Query: 60 GYAHSTREYHTMI------AILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRY 113
G A S Y+++I G + D L+ EM P+ VT +LI Y
Sbjct: 156 GLAPSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVT---FGVLINGY 209
Query: 114 CAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNT 172
C + A+ F K+ A + + L+S LC V++ LM +D+ N
Sbjct: 210 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 269
Query: 173 KSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
+F +L G+C G +A W++ M++R + DVV ++ +I Y + + + +
Sbjct: 270 ITFGCVLKGFCK-KGMMADAND-WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 327
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ M + GI + YN +I ++ + A L+ M+EKG+ +VVTYN LI LC
Sbjct: 328 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 385
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS---LMKSMEEKGVAPNVVT 280
L K + +K G+ YN++I K + L+K M E G++P VT
Sbjct: 142 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 201
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMR 337
+ LI CK A + F+EM Q+GI+ ++ TY++ + + G EE L+E M
Sbjct: 202 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 261
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+G P T+ ++K F + + + ++E PD Y LI GK+E
Sbjct: 262 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 321
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
+A M +K + P T
Sbjct: 322 DAMAVKEAMAKKGISPNVTT 341
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 161/373 (43%), Gaps = 44/373 (11%)
Query: 84 AWALIDEMRGGETGP--SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + M G TGP +L T T ILI C + A F R +
Sbjct: 83 AVALFNRMSTG-TGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVV 141
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNG---W--------- 182
LL LC K +A ++F C D ++T ++ +G W
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201
Query: 183 -------CNII------------GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
CN++ G EA ++ EM+Q+G+ +VV+++ +I KAR
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ K + QM G++ D YN +IH + K A+ + K M +GV PN VT ++
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMG 340
+ LCK +++EAR+ FD ML +G I +Y L T ++ L M + G
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
P + +L+ +++ ++ ++ + G PD +Y A+IHA G +++A
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441
Query: 401 QYYMEMKEKQLLP 413
+ M +K + P
Sbjct: 442 DKFNHMIDKGVEP 454
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 159/343 (46%), Gaps = 50/343 (14%)
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFN 176
VG A + F+ + + + ++ ALC+ + V A+ ++ V P N ++N
Sbjct: 227 VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV-TYN 285
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGIC------------------------------- 205
+++G+ + +G ++A R++ EM+ RG+
Sbjct: 286 TLIHGY-STLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 206 ----YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+++S+S ++ Y+ A L + LF+ M R GI ++ V+N +++ AK +V++
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVRE 404
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL- 320
A+ + + M+++G+ P+V+TY ++I C+ +D+A F+ M+ +G+ P Y +
Sbjct: 405 AMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQ 464
Query: 321 ------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
D+++ E V+ +R G P ++ LI + + ++++ I
Sbjct: 465 GFCTHGDLVKAEELVY----EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
G D + +T+LI L GK+ EA + + M + P+ T
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 13/343 (3%)
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA 135
G VR+ A + ++M+ P ++T L +I +C + + A++ F
Sbjct: 400 GMVRE---AMFIFEDMQKRGLNPDVLT---YLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
+Q L+ C + ++ AE L++ NK + P SF ++N C G EA+
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPC-ILSFASLINHLCKE-GRVFEAQ 511
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R++ + + G DV F+ +I Y + + R+ D M +GIE D Y +++
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K + D + L + + KGV P TY ++ L A + A++ F EM++ GI+ TI
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631
Query: 314 RTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
TY L + EE + + + M + ++I K + R+ ++
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
I + G P +YT ++ L G +EEA + M + L P
Sbjct: 692 IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSP 734
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 144/323 (44%), Gaps = 11/323 (3%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMFC 163
IL+ Y V A+ F ++ + + ++ A CR ++ DA H++
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI-- 448
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+K V P N + ++ G+C G +AE + E+ +G+ ++SF+ +I+ K
Sbjct: 449 DKGVEP-NFAVYQCLIQGFCTH-GDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + R+FD + R G + D ++ ++I + +A + +M G+ P++VTY +
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMG 340
L+ CK ++D+ F E+L +G+ PT TY LD + G + + M + G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
T TY +L+ R V+ ++ D +I +F + EEA
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686
Query: 401 QYYMEMKEKQLLPEPKTDELLQD 423
+ + + L+P +T ++ +
Sbjct: 687 GLFASIPDYGLVPTVQTYTIMME 709
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--F 162
LI YC + G+ AF + +VGIE + L++ C+ + D L
Sbjct: 532 LIDGYCLI---GKMSEAFRVHDAM-VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFREL 587
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
+K V P T ++ IIL+G + G + A+ ++ EM + GI + ++S +++ +
Sbjct: 588 LHKGVKP-TTFTYGIILDGLFHA-GRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNN 645
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
+ + +F ++ M ++ D + N +I + K R ++A L S+ + G+ P V TY
Sbjct: 646 CTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYT 705
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT 325
+++ L K ++EA F ML+ G+SP T H I+RT
Sbjct: 706 IMMENLIKEGSVEEAEGVFSVMLKSGLSP---TSHFINVIVRT 745
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LM 266
V ++S +I C +AR L F + R G++ D V ++++ L + +A+ L
Sbjct: 103 VYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLF 162
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARK----LDEARQAFDEMLQRGISP-TIRTY----H 317
M E G P+ ++Y++++K +C + LD R A Q G P + Y H
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK---QGGGCPCNVVVYSTVVH 219
Query: 318 AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ GE L M + G P TY +I + R + ++ NG
Sbjct: 220 GLFKEGKVGEAC-DLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y LIH G+ ++A + + EM + ++P T
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 160/397 (40%), Gaps = 43/397 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A S + T+++ L + A L +EM P+ VT ++I YC D+
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN---VMIEGYCEEGDM 558
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNII 178
+A ++ L+ LC +A+ + +K N + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+G+C G EA V EM QRG+ D+V + +I K ++ L +M G
Sbjct: 619 LHGFCRE-GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
++ D +Y ++I A +K K+A + M +G PN VTY ++I LCKA ++EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG-------------------------------- 326
+M P TY FLDI+ G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 327 ------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
EE L+ M G P TY +I + R ++WN ++E G PDR
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Y LIH + G++ +A + EM + L+P KT
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 12/341 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K +K A + ++ G + P +VT TL + C V + +
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL---VYGLCKVQEFEIGLEMMD 321
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+F+ L+ L + +++A +L+ K V F + N + +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV---KRVVDFGVSPNLFVYNALIDSLC 378
Query: 188 SSR---EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
R EAE ++ M + G+ + V++S +I + + L L +M G++
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
YN++I+ K + A M M K + P VVTY SL+ C K+++A + + EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+GI+P+I T+ L + R G + L M + +P TY ++I+ +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
F+ E++E G PD SY LIH L L G+ EA +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 166/414 (40%), Gaps = 55/414 (13%)
Query: 45 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 104
WEA AGK Y T++ L KV++F+ ++DEM PS
Sbjct: 279 WEAVGIKKDLAGKD--LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---- 160
+L+ +R+ + + A+N F + + + L+ +LC+ + +AE L
Sbjct: 337 SLVEGLRKRGKIEE---ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 161 -----------------MFCNK--------------------DVFPFNTKSFNIILNGWC 183
MFC + V+P+N+ ++NG C
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS-----LINGHC 448
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G AE EM + + VV+++ ++ Y ++K LRL+ +M GI
Sbjct: 449 KF-GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
+ ++ L + L++DA+ L M E V PN VTYN +I+ C+ + +A + E
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 304 MLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M ++GI P +Y + + TG+ E ++ + K C+ Y L+ F R +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
V E+ + G D Y LI + + EM ++ L P+
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 199/502 (39%), Gaps = 133/502 (26%)
Query: 27 IKVSSELVS---------EVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK 77
I +SSELVS E+L +D + FF + G G+ HST + +I L K
Sbjct: 57 IALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVK 116
Query: 78 VRKFDTAWALIDEMRGGETGPS-------------------------------------- 99
F A +L+ + PS
Sbjct: 117 ANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGV 176
Query: 100 -----LVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFA---------VGIED----F 141
++TK +LL +R A+ ++ ++ F A VGI +
Sbjct: 177 LVFKMMITKVSLLPEVRTLSAL------LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 142 QGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
G++ +LC K++ A+ ++ C+ ++ P+N ++++G C + ++V
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN-----VLIDGLC-------KKQKV 278
Query: 196 W------MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
W +++ + + DVV++ ++ K + L + D+M + +++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ L K +++A++L+K + + GV+PN+ YN+LI LCK RK EA FD M + G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 310 SPTIRTYHAFLDI-----------------IRTGEEVF---------------------G 331
P TY +D+ + TG ++ G
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+ M +PT TY L+ + + ++++E++ G P ++T L+ LF
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 392 LNGKLEEAHQYYMEMKEKQLLP 413
G + +A + + EM E + P
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKP 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M +++ + +V + S ++ K R+ + LF+ M +GI D +Y VI +L +
Sbjct: 181 MMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ + A ++ ME G N+V YN LI LCK +K+ EA ++ + + P + TY
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 317 HAFLDIIRTGEEVFGLLESMRKMGC---QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ + +E LE M +M C P+ L++ + + + + +
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G P+ Y ALI +L K EA + M + L P T +L D
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 167/367 (45%), Gaps = 27/367 (7%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G A + Y+T+++ ++ A +++ M P L T +L C
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYN---VLAAGLCQA 322
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF------ 170
V A F+ +E LL + Y + DA C+ D
Sbjct: 323 GKVDEA---------FRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMRE 373
Query: 171 -----NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ NI++ G C G A +M+ G+ DV++++ +I + KA N+
Sbjct: 374 KGVKATLVTHNIVIKGLCKD-GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIA 432
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K L D+M R G++ D N V++ L K + ++A L++S ++G P+ V+Y +++
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVM 492
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
K + A + +DEM+++ ++P+I TY+ + + R G +E L + + G
Sbjct: 493 AAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + TY ++I + + N F+ N++ EN PD + L++ L LNGKL++A +
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612
Query: 403 YMEMKEK 409
+ EK
Sbjct: 613 FESWVEK 619
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 160/371 (43%), Gaps = 44/371 (11%)
Query: 84 AWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQG 143
A + + M+G P VT TLL +C +G A K+ A +
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLL---NAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279
Query: 144 LLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
L+SA R ++ A ++ + F + ++N++ G C G EA R+ EM +
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA-GKVDEAFRLKDEMERL 338
Query: 203 G-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G + DVV+++ + K R LRL ++M+ G++ +N VI L K ++
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEG 398
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A+ + M + G+AP+V+TYN+LI CKA + +A DEM++RG+ T + L
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLY 458
Query: 322 II---RTGEEVFGLLESMRKMG-----------------------------------CQP 343
+ + EE GLL+S + G P
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
+ TY LIK SR + NE+ E G PD ++Y +IHA G LE A Q++
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578
Query: 404 MEMKEKQLLPE 414
+M E P+
Sbjct: 579 NKMVENSFKPD 589
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 159/353 (45%), Gaps = 41/353 (11%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-C 163
T +L+ +C+ + A++ + F + + LL+A CR + +A L+
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265
Query: 164 NKD-VFP----FNTK------------------------------SFNIILNGWCNIIGS 188
KD V P +NT ++N++ G C G
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ-AGK 324
Query: 189 SREAERVWMEMSQRG-ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
EA R+ EM + G + DVV+++ + K R LRL ++M+ G++ +N
Sbjct: 325 VDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHN 384
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
VI L K ++ A+ + M + G+AP+V+TYN+LI CKA + +A DEM++R
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G+ T + L + + EE GLL+S + G P +Y ++ + +
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++W+E+ E P S+Y LI L G+L+EA E+ EK L+P+ T
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 156/331 (47%), Gaps = 23/331 (6%)
Query: 130 KRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF---------PFNTKSFNIILN 180
+R + ++ +LSAL R + L D F P N +FN++++
Sbjct: 159 RRVRVRPSLQAANAVLSALARSPSTSPQASL-----DAFRSIVALRLHP-NHYTFNLLVH 212
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
C+ G+ +A M G+ D V+++ +++ + + L + L +MK+ G+
Sbjct: 213 THCSK-GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVA 271
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
R YN ++ A A+ +K A ++++M G P++ TYN L LC+A K+DEA +
Sbjct: 272 PTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL 331
Query: 301 FDEMLQRG-ISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
DEM + G + P + TY+ D R + LLE MR+ G + T T+ ++IK
Sbjct: 332 KDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLC 391
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + N+++++G PD +Y LIHA G + +A+ EM + L +
Sbjct: 392 KDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTF 451
Query: 417 T-DELLQDWSYNKQFVERQIASLKAHQPQSG 446
T + +L + K++ E Q L PQ G
Sbjct: 452 TLNTVLYNLCKEKRYEEAQ--GLLQSPPQRG 480
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 8/365 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+ K R A L++EMR +LVT I+I+ C ++ A+
Sbjct: 348 YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHN---IVIKGLCKDGELEGALGCLN 404
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNII 186
A + + L+ A C+ N+ A LM + +T + N +L C
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE- 463
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
EA+ + QRG D VS+ +++ Y K N LRL+D+M + Y
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I L++ +K+AI + + EKG+ P+ TYN +I CK L+ A Q ++M++
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE 583
Query: 307 RGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
P + T + ++ + G ++ L ES + G + TY LI+ +
Sbjct: 584 NSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDT 643
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ ++ G PD +Y ++ AL G+ EEA ++ E L + + LL+
Sbjct: 644 ALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKP 703
Query: 424 WSYNK 428
S ++
Sbjct: 704 SSVDE 708
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 7/219 (3%)
Query: 215 ISCYSKARNLHKVLRLFDQMKR-MGIECDRKVYNAVIHALAKGRLVKDAISL--MKSMEE 271
+S YS+ R H +L ++R + + + NAV+ ALA+ SL +S+
Sbjct: 138 LSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVA 197
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EE 328
+ PN T+N L+ C L +A M G+SP TY+ L+ R G E
Sbjct: 198 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 257
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
LL M+K G PT TY L+ ++R KV ++ NG PD +Y L
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAA 317
Query: 389 ALFLNGKLEEAHQYYMEMKE-KQLLPEPKTDELLQDWSY 426
L GK++EA + EM+ LLP+ T L D +
Sbjct: 318 GLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACF 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
L + Q G+ Y T++A K + A L DEM + PS+ T TL+ +
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLS 531
Query: 112 RYCAVHDVGR---AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV- 167
R +GR AI+ + ++ A C+ ++++A F NK V
Sbjct: 532 R------MGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA--FQFHNKMVE 583
Query: 168 --FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
F + + N ++NG C + G +A +++ ++G DV++++ +I K ++
Sbjct: 584 NSFKPDVVTCNTLMNGLC-LNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG----------VA 275
L F M+ G++ D YN V+ AL++ ++A +++ + E G +
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLK 702
Query: 276 PNVV-------------------------TYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
P+ V Y L+ LC + + EA+ DEM+Q+G+S
Sbjct: 703 PSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762
Query: 311 PTIRTYHAFLD 321
TY ++
Sbjct: 763 VDSSTYITLME 773
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 189/424 (44%), Gaps = 30/424 (7%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSLVTK 103
+ +FF + + H+ Y TM+ L R A +L+ + R G S +
Sbjct: 100 SSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFS 159
Query: 104 QTLLILIRRYCAVHDVG-----------------RAINAFYAYKRFKFAVGIEDFQGLLS 146
L + R + H VG A+ F + KF V I + LL
Sbjct: 160 SILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLR 219
Query: 147 ALCRYKNVQD----AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
+ R + V+ A +L + +P FN++++G+C G A V+ E+ +R
Sbjct: 220 RVVRLRPVEIERSWALYLEVLDSG-YPPKIYFFNVLMHGFCKA-GDVGNARLVFDEIPKR 277
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKD 261
G+ VVSF+ +IS K+ ++ + RL M+ G+ D ++A+I+ L K GRL +
Sbjct: 278 GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
++ L M +G+ PN VT+ +LI CK K+D A + F ML +G+ P + TY+A ++
Sbjct: 338 SL-LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 396
Query: 322 -IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ + G+ E L+ M G +P T+ LI + + ++ + E G
Sbjct: 397 GLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIEL 456
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
D ++TALI L G++ +A + +M P+ T ++ D K V+ L
Sbjct: 457 DDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLL 516
Query: 439 KAHQ 442
K Q
Sbjct: 517 KEMQ 520
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 147/321 (45%), Gaps = 7/321 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNK 165
+L+ +C DVG A F + + F L+S C+ +V++ L + ++
Sbjct: 253 VLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESE 312
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P + +F+ ++NG C G E ++ EM RG+ + V+F+ +I K +
Sbjct: 313 GVCP-DVFTFSALINGLCKE-GRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L+ F M G+ D YNA+I+ L K +K+A L+ M G+ P+ +T+ +LI
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
CK ++ A + M++ GI + A + + R G + +L M G +
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P + TY M+I F + FK+ E+ +G+ P +Y AL++ L G+++ A
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550
Query: 403 YMEMKEKQLLPEPKTDELLQD 423
M + P T +L D
Sbjct: 551 LDAMLNVGVAPNDITYNILLD 571
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 114/264 (43%), Gaps = 7/264 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + +I L K + D L DEM G P+ VT TL I C V
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTL---IDGQCKGGKV 369
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+ F + + L++ LC+ ++++A L+ + P + +F
Sbjct: 370 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKP-DKITFTT 428
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C G A + M + GI D V+F+ +IS + +H R+ M
Sbjct: 429 LIDGCCKD-GDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + D Y VI K VK L+K M+ G P VVTYN+L+ LCK ++ A
Sbjct: 488 GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA 547
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD 321
+ D ML G++P TY+ LD
Sbjct: 548 KMLLDAMLNVGVAPNDITYNILLD 571
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 42/400 (10%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
+ + A FF W K+ Y H + +M+ L K D A D +R
Sbjct: 83 NTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVK----DKILAPADHVR----------- 127
Query: 104 QTLLILIRRYCAVHDVGRAINAFY----AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
IL+ + C D + + F + F + F LL L ++ V A++
Sbjct: 128 ----ILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQN 183
Query: 160 LMFCNKDVFPFNTK----SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
+ +F K +FN ++N C G +EA V+ ++ Q +C D +++ +I
Sbjct: 184 VY---AQIFSSGVKPSLLTFNTMINILCKK-GKVQEAVLVFNKIFQFDLCPDAFTYTSLI 239
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + R L K +FD+M + G + Y+ +I+ L + +A+ +++ M EKG+
Sbjct: 240 LGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIE 299
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
P V TY I LC ++D+A M ++G SP+++TY A + + R G E G+
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGM 359
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
M K G P TY LI + +FG K+++ + +G + +Y +I LF
Sbjct: 360 YHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFG 419
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
+E+A + +M + P P +YN VE
Sbjct: 420 MDDIEKAMVVFNKMLKDG--PSPTV------VTYNTLIVE 451
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 168/390 (43%), Gaps = 45/390 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I + RK D A+ + D M P+ VT TL I C +G A++
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTL---INGLCNEGRIGEAMDMLE 291
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + +S+LC V DA +L+ K P + +++ I++G
Sbjct: 292 EMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSP-SVQTYTAIISGLFRA 350
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G A ++ +M + G+ + V+++ +I+ L++FD M+ G + +
Sbjct: 351 -GKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT 409
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI-------------------- 285
YN +I L ++ A+ + M + G +P VVTYN+LI
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469
Query: 286 ----KP-----------LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--E 327
+P CK KLD A F EML+ GISP TY A +D + G +
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
L E M + GC + +TY +I S+ +F K +++E G P+ +YT+LI
Sbjct: 530 VALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ L N A + + EM++K LP T
Sbjct: 590 NGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G +T Y+ +I L +F A + D M G T L QT +I+ +
Sbjct: 365 KEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT---LANAQTYNQIIKGLFGMD 421
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKSF 175
D+ +A+ F + + + + L+ + + +A ++ K + P + +++
Sbjct: 422 DIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP-DERTY 480
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++G+C G A + EM + GI + +++ +I Y K + L LF++M+
Sbjct: 481 CELISGFCKG-GKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G + YNA+I L+KG +A M E+G+ PN +TY SLI LCK +
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
A + F EM ++ P TY + + + + G+ E + + GC+PT DTY L+
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK--VDAAERLTENGCEPTIDTYSTLVSG 657
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
R + ++ + E G P Y +L+ A + K++ A + + M K P
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQP 716
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 162/356 (45%), Gaps = 10/356 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
SG S ++TMI IL K K A + +++ + P T +L++ +C
Sbjct: 190 SSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLIL---GHCRNR 246
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ +A F + + L++ LC + +A ++ K + P ++
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEP-TVYTY 305
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+ ++ C+I G +A + M ++G V +++ IIS +A + + ++ +M
Sbjct: 306 TVPISSLCDI-GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKML 364
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ + YNA+I+ L A+ + ME G N TYN +IK L ++
Sbjct: 365 KEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIE 424
Query: 296 EARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLI 352
+A F++ML+ G SPT+ TY+ + + ++ G L M++ C+P TY LI
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELI 484
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
F + + + + E+ + G P++ +YTA+I GK++ A + M+E
Sbjct: 485 SGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 151/361 (41%), Gaps = 43/361 (11%)
Query: 50 TFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
T FL+ K+S R Y +I+ K K D+A + EM P+ + T +
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN---QWTYTAM 518
Query: 110 IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-- 167
I YC + A++ F + + IE + ++S L + +AE FC K
Sbjct: 519 IDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK--FCAKMTEQ 576
Query: 168 -FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR--------------GICYD----- 207
NT ++ ++NG C ++ A +++ EM ++ G+C +
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNL-AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA 635
Query: 208 ------------VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ ++S ++S + ++ +L + MK G+ ++Y +++ A K
Sbjct: 636 AERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCK 695
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
V A+ + M KG P++ Y LI LC + +EA F +L++ + +
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIV 755
Query: 316 YHAFLD-IIRTGEE--VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
+ +D +++ G+ L M C P+ TYI+L ++ S+ + ++ N +
Sbjct: 756 WTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLR 815
Query: 373 E 373
E
Sbjct: 816 E 816
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 10/320 (3%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
T LI +C D RA+ F I + L+ L + + A LM
Sbjct: 332 TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
P N ++N+++NG C + G +A + + +G D+ +++ +I Y K
Sbjct: 392 AENGCLP-NIWTYNLVINGLCKM-GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYN 282
L + ++M G+ D YN +++ L K ++ + + K+MEEKG PN++TYN
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509
Query: 283 SLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDIIRTGEEVFGLLESMRKMGC 341
++ LCKA+K++EA EM +G+ P + ++ F + G ++ G + R+M
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIG-DIDGAYQLFRRMEK 568
Query: 342 Q----PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
Q T TY +++ FS K+++ + +G PD +Y +I G +
Sbjct: 569 QYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNIT 628
Query: 398 EAHQYYMEMKEKQLLPEPKT 417
+ +++ +E EK+ +P T
Sbjct: 629 QGYKFLLENMEKRFIPSLTT 648
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 25/368 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y ++I K D A A+ + G PS+V TL+ + + +
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFNTK 173
+ +N I + +++ LC+ V DA HL+ C D+F +NT
Sbjct: 385 LQLMNEMAENGCLP---NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNT- 440
Query: 174 SFNIILNGWCN---IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+++G+C + ++ R+W +G+ DV++++ +++ KA +V+ +
Sbjct: 441 ----LIDGYCKQLKLDSATEMVNRMW----SQGMTPDVITYNTLLNGLCKAGKSEEVMEI 492
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
F M+ G + YN ++ +L K + V +A+ L+ M+ KG+ P+VV++ +L CK
Sbjct: 493 FKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552
Query: 291 ARKLDEARQAFDEM-LQRGISPTIRTYHAFLDIIR---TGEEVFGLLESMRKMGCQPTND 346
+D A Q F M Q + T TY+ + L M+ GC P N
Sbjct: 553 IGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++I F + +K E E P +++ +++ L + K+ EA M
Sbjct: 613 TYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLM 672
Query: 407 KEKQLLPE 414
+K ++PE
Sbjct: 673 LQKGIVPE 680
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 13/358 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD----VGRAI 123
Y T++A L + D A L DEM P +V L+ ++ + V + +G+ +
Sbjct: 184 YCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVL 243
Query: 124 NAFYAYKRFKFAVGIEDF--QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIIL 179
F F + ++ +G L R V +AE + N P + ++N I+
Sbjct: 244 KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEP-DDLTYNSII 302
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+G+C G ++A RV + +G D ++ +I+ + K + + + +F G+
Sbjct: 303 DGYCKK-GMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGL 361
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+YN +I L++ L+ A+ LM M E G PN+ TYN +I LCK + +A
Sbjct: 362 RPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASH 421
Query: 300 AFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFS 356
D+ + +G P I TY+ +D ++ E + +M G P TY L+
Sbjct: 422 LVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLC 481
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + V +++ + E G P+ +Y ++ +L K+ EA EMK K L P+
Sbjct: 482 KAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 14/296 (4%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN------IIGSSR-- 190
F L+ LC+ V ++E L+ + V P N +FNI + G C + +SR
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCP-NLFTFNIFVQGLCREGALDRAVRNSRVV 277
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EAE +M G D ++++ II Y K + R+ G + D Y ++I
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ K A+++ K KG+ P++V YN+LIK L + + A Q +EM + G
Sbjct: 338 NGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL 397
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P I TY+ ++ + + G + L++ GC P TY LI + + + + ++
Sbjct: 398 PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
N + G PD +Y L++ L GK EE + + M+EK P T ++ D
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 49/385 (12%)
Query: 41 VRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
++ D A F A + G+ H+ Y ++ LG +F+ L+ EMR E +
Sbjct: 16 IQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR--ENVNNA 73
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
+ + + ++ Y V A++ F E +
Sbjct: 74 LLEGAYIEAMKNYGRKGKVQEAVDTF-------------------------------ERM 102
Query: 161 MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSK 220
F N D + S N I+N G +A +V+M M RG+ DV +++ I + K
Sbjct: 103 DFYNCDP---SVHSHNAIMNILVEF-GYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCK 158
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
+ LRL M +G + + Y V+ L A L M + + P+VV
Sbjct: 159 TARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVA 218
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF---------LDIIRTGEEVFG 331
+N L+ LCK + E+ + ++L+RG+ P + T++ F LD V
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278
Query: 332 LLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
E +RKM G +P + TY +I + + + +V + G PD +Y +LI+
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
+G + A + + K L P
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRP 363
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 11/253 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I K K D+A +++ M P ++T TLL C + F
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL---NGLCKAGKSEEVMEIFK 494
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
A + I + ++ +LC+ K V +A L+ +K + P + SF + G+C I
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKP-DVVSFGTLFTGFCKI 553
Query: 186 IGSSREAERVWMEMS-QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G A +++ M Q +C+ +++ I+S +S+ N++ ++LF MK G + D
Sbjct: 554 -GDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612
Query: 245 VYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y VI K G + + L+++ME++ + P++ T+ ++ LC K+ EA
Sbjct: 613 TYRVVIDGFCKMGNITQGYKFLLENMEKRFI-PSLTTFGRVLNCLCVKDKVHEAVGIIHL 671
Query: 304 MLQRGISP-TIRT 315
MLQ+GI P T+ T
Sbjct: 672 MLQKGIVPETVNT 684
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYI 349
K+ EA F+ M P++ +++A ++I+ + + MR G Q TY
Sbjct: 91 KVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYT 150
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ IK F + + ++ + E G + +Y ++ L+ +G+ + A + + EM +
Sbjct: 151 IRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLAR 210
Query: 410 QLLPE 414
L P+
Sbjct: 211 CLCPD 215
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 8/353 (2%)
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
L K R+ AW L DEM PS+VT TL+ R AV + A +
Sbjct: 153 LVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ---I 209
Query: 135 AVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWCNIIGSSREAE 193
+ + ++ LC + DAE L K+ N ++N++++G C A
Sbjct: 210 DPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQG-DDVNSAF 268
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ E+ G+ + V F+ +I + KA+ + +F M R G+ VYN+++
Sbjct: 269 VLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGA 328
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
+ ++A+SL + M G+ P+ T + +++ LC ++ A + + + + G++
Sbjct: 329 FRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNA 388
Query: 314 RTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
Y+A +D R G EE M ++G +P +Y LI S+ + ++ E
Sbjct: 389 AAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTE 448
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ G P+ +YTALIH NG ++ A +++ EM E + P T +L D
Sbjct: 449 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVD 501
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 143/304 (47%), Gaps = 7/304 (2%)
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
A+ +G A Y ++R + +L L + + + A L + + P +
Sbjct: 120 ALSQMGLLDEALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP-SV 178
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N ++N C G+ +A+ +W +M R I +V++++ +I + + RLFD
Sbjct: 179 VTYNTLINA-CRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFD 237
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
MK G+ ++ YN ++ +G V A L + + G+ PN V + +LI CKA+
Sbjct: 238 AMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAK 297
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYI 349
+ EA+ F +M + G++PT+ Y++ +D R+G+ E L + M ++G P T
Sbjct: 298 RFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCS 357
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
++++ Q + + E+G + ++Y ALI NG LEEA M E
Sbjct: 358 IVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEV 417
Query: 410 QLLP 413
+ P
Sbjct: 418 GVEP 421
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 167/381 (43%), Gaps = 37/381 (9%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI +L + A L D M+ P+ + T +L+ +C DV +AF
Sbjct: 216 YTSMICVLCEEGCIGDAERLFDAMKEAGMRPN---QYTYNVLMSGHCQGDDVN---SAFV 269
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILN 180
Y+ + I + F L+ C+ K +A+ + +D+ F +N +++
Sbjct: 270 LYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF---RDMPRFGVAPTVPVYNSLMD 326
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G G ++EA ++ EM++ G+C D + S ++ + R + ++ G+
Sbjct: 327 GAFRS-GDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN 385
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ YNA+I + +++A++ M E GV PNVV+Y+SLI K K+ A
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAI 445
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
+ EM+ +GI P + TY A + + G + F + M + G P T +L+ R
Sbjct: 446 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505
Query: 358 WRQFGNVFKVWNEIS-----------------ENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ + + E S E P+ + Y LI+ L+L+G+ EA
Sbjct: 506 ENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAG 565
Query: 401 QYYMEMKEKQLLPEPKTDELL 421
+ + M++ ++ + T LL
Sbjct: 566 KLFSYMRKSGMISDSFTYTLL 586
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 174/373 (46%), Gaps = 46/373 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLI------LIRRY 113
G++ Y T+I L K+ K A L+ +M G P+L+ ++ L+
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215
Query: 114 CAVHD--VGRAI-----------NAFYAYKRFKFAVGI-------ED-------FQGLLS 146
C + VG+ I + F +F+ AV + ED F L+
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275
Query: 147 ALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALC+ V +A ++ + + + P + S N ++NGWC + G EA+ V+ M +RG
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEP-DVVSCNALMNGWC-LRGCMSEAKEVFDRMVERGK 333
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
+V+S+S +I+ Y K + + + LRL +M + + D YN ++ L+K V
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIR 324
L+++M G AP+++TYN L+ K LD+A F ++ GISP IRTY+ +D +
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC 453
Query: 325 TG------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
G +E+F LL GC+P TY ++I R + E+ ++G P
Sbjct: 454 KGGRMKAAKEIFQLLSV---KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPP 510
Query: 379 DRSSYTALIHALF 391
+ ++ L+ AL
Sbjct: 511 NAVTFDPLVRALL 523
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--F 162
TL L++ C A+N + F+ + L++ LC+ +DA L+
Sbjct: 128 TLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM 187
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
V P N +N++++G C G EA + EM +GIC DV +++ +I + A
Sbjct: 188 EKGGVRP-NLIMYNMVVDGLCKE-GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAG 245
Query: 223 NLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAK-----------GRLVK-----DAIS- 264
+RL ++M + + D +N ++ AL K G ++K D +S
Sbjct: 246 QFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSC 305
Query: 265 --LMKS----------------MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
LM M E+G PNV++Y++LI CK + +DEA + EM Q
Sbjct: 306 NALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQ 365
Query: 307 RGISPTIRTYHAFLD-IIRTGEEVF--GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
R + P TY+ LD + ++G ++ L+E+MR G P TY +L+ + +
Sbjct: 366 RNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDK 425
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ I + G P+ +Y LI L G+++ A + + + K P +T
Sbjct: 426 ALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRT 479
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 161/374 (43%), Gaps = 26/374 (6%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILI---RRYCAVH 117
Y+HS R+ L K FD A + M PS+V+ LL I + Y V
Sbjct: 22 YSHSPRK------TLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVV 75
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFN 176
+ +++ K + I +++L + A +M K F + +
Sbjct: 76 SLCSHLDSKGTPKPSLVTLSI-----FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLT 130
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++ G C + G + EA ++ +G +D V + +I+ K + L +M++
Sbjct: 131 TLMKGLC-LKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEK 189
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G+ + +YN V+ L K LV +A L M KG+ +V TYNSLI C A +
Sbjct: 190 GGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQG 249
Query: 297 ARQAFDEMLQR-GISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDTYI 349
A + +EM+ + + P + T++ +D ++ VFGL M K G +P +
Sbjct: 250 AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL---MIKRGLEPDVVSCN 306
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
L+ + +V++ + E G P+ SY+ LI+ ++EA + EM ++
Sbjct: 307 ALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366
Query: 410 QLLPEPKTDELLQD 423
L+P+ T L D
Sbjct: 367 NLVPDTVTYNCLLD 380
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA-KGRLVKDAISLM 266
+V+ S I+ + + + ++ + G D ++ L KGR +A++L
Sbjct: 91 LVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTF-EALNLY 149
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRT 325
KG + + V Y +LI LCK K +A + +M + G+ P + Y+ +D + +
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE-ISENGNGPDRSS 382
G E GL M G TY LI F QF ++ NE + + PD +
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYT 269
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPE-PKTDELLQDW 424
+ L+ AL G + EA + M ++ L P+ + L+ W
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGW 312
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 163/389 (41%), Gaps = 27/389 (6%)
Query: 34 VSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
VS VL ++ D + A FF WA + G+ +T Y ++ IL R + A + E
Sbjct: 98 VSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKE--- 154
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
LI RR DV + + R G F L S
Sbjct: 155 -------------LISSRRILPGFDVFEVLWS----TRNVCVPGFGVFDALFSVFIELGM 197
Query: 154 VQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSF 211
+++A VFP +S N L G + + + +M GI V ++
Sbjct: 198 LEEAGQCFSRMTRFRVFP-KARSCNAFLYRLAKT-GKGDLSNKFFRDMVGAGIAQSVFTY 255
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ +I K ++ LF QMK+MG+ D YN++I K L+ ++ L + M++
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEE 328
G P+V+TYN+LI CK ++ +A EM G+ P + TY +D + ++
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQ 375
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L MR++G P TY LI + + K+ +E+ + G + +YT L+
Sbjct: 376 AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLD 435
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L G++ EA + M + + P KT
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 170/363 (46%), Gaps = 9/363 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ G Y+++I GK+ D ++ L +EM+ P ++T LI +C
Sbjct: 279 KQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNA---LINCFCKY 335
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
+ +A + + K + + L+ ALC+ +Q A + + V N ++
Sbjct: 336 EQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTY 395
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
+++ C G +A ++ EM Q + ++VV+++ ++ K + + LF M
Sbjct: 396 TSLIDANCK-AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMI 454
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ G+ + K Y A++H K + V++A+ L+K ++EK + P+++ Y ++I LC KL+
Sbjct: 455 KAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLE 514
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIMLI 352
E EM GI Y +D +TG+ E LL+ M +G + T T+ +LI
Sbjct: 515 ECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLI 574
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSY-TALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + +++ P+ + TALI L N +E A + + EM++K +
Sbjct: 575 DGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNM 634
Query: 412 LPE 414
+P+
Sbjct: 635 VPD 637
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 158/382 (41%), Gaps = 24/382 (6%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL ++ G + + Y ++I K A L DEM + G ++VT TLL
Sbjct: 379 FLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLL---D 435
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN------K 165
C + A + F A + ++ + L+ + K V++A L+
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D+ + T I+ G C+ E E V EM GI + V ++ + Y K
Sbjct: 496 DLLLYGT-----IIWGLCSQ-NKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTV 549
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN-VVTYNSL 284
+ L L +M +G+E + +I L K LV++AI M + + PN V +L
Sbjct: 550 EALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTAL 609
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGC 341
I LCK ++ A++ FDEM + + P Y A +D + +E + M ++G
Sbjct: 610 IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGM 669
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ Y L+ S+ NE+ G PD L+ + G ++EA +
Sbjct: 670 ELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIE 729
Query: 402 YYMEMKEKQLLPEPKTDELLQD 423
+ E+ +K L DELL++
Sbjct: 730 LHDELLKKVPL-----DELLEE 746
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V++A+ + ++++A M V P + N+ + L K K D + + F +M
Sbjct: 184 VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDM 243
Query: 305 LQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ GI+ ++ TY+ + + + G+ V L M++MG P TY LI + +
Sbjct: 244 VGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLL 303
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
F ++ E+ + G PD +Y ALI+ ++ +A + EMK L P T L
Sbjct: 304 DESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTL 363
Query: 422 QDWSYNKQFVERQIASL 438
D + +++ I L
Sbjct: 364 IDALCKEHMLQQAIKFL 380
>gi|226497014|ref|NP_001152455.1| GTP binding protein [Zea mays]
gi|195656487|gb|ACG47711.1| GTP binding protein [Zea mays]
Length = 455
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Query: 3 TLVDILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYA 62
L +L +F R ++R + +++ + VL RN + FFL+A G+
Sbjct: 55 ALCRVLSDFRGPRHDLRAALSGFAPRLTPAAAAAVLRRCRNLPVPSLRFFLFAAAMPGFT 114
Query: 63 HSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
H + L R F +L+ ++ S +++ +L R Y A
Sbjct: 115 HLPDSLLILAGSLAGTRLFPLLRSLLSDLPR-----SALSRDLFPLLFRAYARAGLPEDA 169
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGW 182
I AF + +RF F + D LL L V+ AE + F + K++ I+++GW
Sbjct: 170 IRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGW 229
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIEC 241
++ S +A++++ EM +RG+ DV +++ +I + ++ M+R G+
Sbjct: 230 A-VVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAP 288
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D Y + + + + A+ ++ M + + PNV TYN++I+ LC+ ++DE+
Sbjct: 289 DAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDESYNIL 348
Query: 302 DEMLQRGISPTIRTYHAFLD 321
+EM G P + +Y+ L+
Sbjct: 349 NEMATYGEKPDVWSYNTLLN 368
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
F + Y++A +R F M+R ++++ L+ LV+ A + +
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 212
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF 330
+ + TY LI +A++ FDEM++RG+ P + Y+A +D + G +V
Sbjct: 213 FQ-FDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVA 271
Query: 331 GLLESMRKM----GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
E ++ M G P TY ++ + +V + + P+ +Y A+
Sbjct: 272 LAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAV 331
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
I L G+++E++ EM P+ WSYN
Sbjct: 332 IRLLCELGEVDESYNILNEMATYGEKPD--------VWSYN 364
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 171/385 (44%), Gaps = 36/385 (9%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A +T ++T+I L K+ + A L+D+M+ P ++T +TL YC + D+
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLF---SGYCKIGDM 575
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKSFNI 177
RA + FA IE F L++ K ++F N+ + P NT ++
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP-NTVAYGA 634
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC-YSKAR-------------- 222
++ GWC G A +++EM ++G+ ++ S ++SC Y K +
Sbjct: 635 LIAGWCKE-GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGT 693
Query: 223 -----------NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
+ KV D + + ++N VI L K ++DA +L+ +++
Sbjct: 694 DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD 753
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--E 328
KG + TY+SLI + +D A D ML G++P I TY++ + + ++GE
Sbjct: 754 KGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSR 813
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L + + G P TY LI K + FK+ + E G P +Y+ LI+
Sbjct: 814 AVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILIN 873
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLP 413
L G +EEA + +M E + P
Sbjct: 874 GLCTQGYMEEAIKLLDQMIENNVDP 898
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 160/361 (44%), Gaps = 19/361 (5%)
Query: 61 YAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG 120
++ S + ++ L + D A + DEMR S+ + ++L R D+G
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSIL---NRLAQTGDLG 225
Query: 121 RAINAFYAYKRF-----KFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKDVFPFNTKS 174
+ F +R KF V I + A C+ K V A E + K N +
Sbjct: 226 ATVAVFEQMQRAGALPDKFTVAI-----MAKAYCKVKGVVHALEFVEEMTKMGVEVNLVA 280
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ ++NG+C + G + +A R+ + RG ++V+++ ++ Y +N+ + + ++
Sbjct: 281 YHAVMNGYCEV-GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEI 339
Query: 235 -KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
K + D V+ AVI+ + ++DA L+ M + + N+ YN +I CK +
Sbjct: 340 RKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGR 399
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+ EA EM G+ P +Y++ +D + G + F +M + G T TY
Sbjct: 400 MVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNA 459
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+K F + ++W + + G P+ S + L+ F +GK E+A + E +
Sbjct: 460 LLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARG 519
Query: 411 L 411
L
Sbjct: 520 L 520
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 141/311 (45%), Gaps = 5/311 (1%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA-EHLMFCNKD 166
I+I YC + + A N + + L+ C+ + A E ++
Sbjct: 389 IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN 448
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
F T ++N +L G+C++ GS +A R+W M ++GI + +S S ++ + K+ K
Sbjct: 449 GFAATTLTYNALLKGFCSL-GSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L L+ + G+ + +N VI+ L K + +A L+ M++ P+++TY +L
Sbjct: 508 ALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFS 567
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQP 343
CK +D A + +E+ G +PTI +++ + I + +V +L M G P
Sbjct: 568 GYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP 627
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
Y LI + + + ++ E+ E G P+ ++L+ + GK +EA+
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687
Query: 404 MEMKEKQLLPE 414
+ ++P+
Sbjct: 688 QNLVGTDMIPD 698
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++ G C + G +A+ + ++ +G D ++S +I S + + L D M
Sbjct: 729 NIVIFGLCKL-GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+G+ + YN++I+ L K + A+SL K + KG++PN +TYN+LI CK +
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLI 352
EA + M++ GI PT+ TY ++ + T EE LL+ M + P TY LI
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 353 KKFSR 357
+ + R
Sbjct: 908 QGYVR 912
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 204 ICYDVVSFS-CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
I +++V F C + A+NL +K G D Y+++IH + V A
Sbjct: 726 IMWNIVIFGLCKLGRIEDAKNL------LADLKDKGFVADNFTYSSLIHGCSASGFVDVA 779
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
L +M G+ PN+VTYNSLI LCK+ +L A F ++ +GISP TY+ +D
Sbjct: 780 FDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDK 839
Query: 323 -IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ G E F L + M + G PT TY +LI K+ +++ EN P+
Sbjct: 840 HCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPN 899
Query: 380 RSSYTALIHA 389
+Y LI
Sbjct: 900 YVTYWTLIQG 909
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 156/413 (37%), Gaps = 81/413 (19%)
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
KV+ A ++EM +LV ++ YC V A + F+
Sbjct: 255 KVKGVVHALEFVEEMTKMGVEVNLVAYHAVM---NGYCEVGQTNDARRMLDSLPGRGFSP 311
Query: 137 GIEDFQGLLSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE 193
I + L+ C KN+++AE + + NK + + F ++NG+C + G +A
Sbjct: 312 NIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV-VDEAVFGAVINGYCQM-GRMEDAA 369
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R+ EM + ++ ++ +I+ Y K + + + +M +G+ D YN+++
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGY 429
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K L+ A +M G A +TYN+L+K C +D+A + + ML++GI+P
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489
Query: 314 RTYHAFLD-IIRTGE-------------------------------------EVFGLLES 335
+ LD ++G+ E L++
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDK 549
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI------------------------ 371
M++ C P TY L + + ++ NE+
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609
Query: 372 -----------SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
S G P+ +Y ALI G L A+ Y+EM EK L+P
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 157/401 (39%), Gaps = 44/401 (10%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G+A +T Y+ ++ + D A L M P+ ++ TLL +
Sbjct: 447 RNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLL---DGFFKSG 503
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------FCNKDVFPFN 171
+A+N + A F +++ LC+ + + +AE L+ C D+ +
Sbjct: 504 KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYR 563
Query: 172 TKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF 231
T + +G+C I G A R+ E+ G + F+ +I+ + A+ KV +
Sbjct: 564 T-----LFSGYCKI-GDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL 617
Query: 232 DQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
+M G+ + Y A+I K + A +L M EKG+ PN+ +SL+ +
Sbjct: 618 FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRK 677
Query: 292 RKLDEARQAFDEMLQRGISPTIRT-------YHAFLDIIRTGEE----------VFG--- 331
K DEA ++ + P I F+D + G +FG
Sbjct: 678 GKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCK 737
Query: 332 ---------LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
LL ++ G N TY LI S F + + + G P+ +
Sbjct: 738 LGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVT 797
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y +LI+ L +G+L A + ++ K + P T L D
Sbjct: 798 YNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLID 838
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 136/352 (38%), Gaps = 53/352 (15%)
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVFPFNTKSFNIILNGW 182
YK F F+ F LL AL + A + + C + +S N ILN
Sbjct: 166 YKEFSFSAA--SFDLLLRALANAGQLDGALQVFDEMRTLGCR-----LSMRSCNSILNRL 218
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
G V+ +M + G D + + + Y K + + L ++M +MG+E +
Sbjct: 219 AQT-GDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVN 277
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR---- 298
Y+AV++ + DA ++ S+ +G +PN+VTY L+K C + ++EA
Sbjct: 278 LVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQ 337
Query: 299 --------------------------------QAFDEMLQRGISPTIRTYHAFLD-IIRT 325
+ +EM+ + + Y+ ++ +
Sbjct: 338 EIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKL 397
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G E +L M +G +P +Y L+ + + F+ +N + NG +Y
Sbjct: 398 GRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTY 457
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
AL+ G +++A + + M +K + P + L D + E+ +
Sbjct: 458 NALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
N ++N ++ G C G A ++ ++ +GI + ++++ +I + K + + +L
Sbjct: 794 NIVTYNSLIYGLCKS-GELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL 852
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
+M GI Y+ +I+ L +++AI L+ M E V PN VTY +LI+ +
Sbjct: 853 KQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912
Query: 291 ARKLDEARQAFDE 303
+D D+
Sbjct: 913 CESVDVPIMPLDQ 925
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 166/360 (46%), Gaps = 7/360 (1%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G H Y+ +I L + +F A +++ +M P +VT +L I +C + V
Sbjct: 99 GIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL---INGFCQGNRV 155
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
A++ + + + + + ++ C+ V +A L +D +T ++N +
Sbjct: 156 FGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSL 215
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ G C G +A R+ +M R I +V++F+ +I+ + + + + +++M R
Sbjct: 216 VTGLC-CSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I+ D YN++IH L V +A ++ M KG P+VVTYN+LI CK +++DE
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY-IMLIKKFSR 357
+ EM QRG+ T++ + E +MG +P TY I+L
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYN 394
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
WR ++ + ++ D ++Y +IH + + G +E+A + + K L P+ T
Sbjct: 395 WR-VEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVT 453
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 141 FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
+ ++ LC + V +A+ ++ K FP + ++N ++NG+C E ++ E
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFP-DVVTYNTLINGFCKT-KRVDEGTKLVRE 339
Query: 199 MSQRGICYDVVSFSCIISCYSKARN--------------------------------LHK 226
MSQRG+ D V+F+ II Y +A + K
Sbjct: 340 MSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEK 399
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
L LF+ M++ +E D YN VIH + V+DA L S+ KG+ P+VVTY ++I
Sbjct: 400 ALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMIS 459
Query: 287 PLCKARKLDEARQAFDEMLQRGISP 311
C+ R D+A + +M + G+ P
Sbjct: 460 GFCRKRLWDKADFLYRKMQEDGLLP 484
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA ++ M Q +V FS ++S +K++N V+ LF M+ GI D YN VI
Sbjct: 52 EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ L + A+S++ M + G P+VVT +SLI C+ ++ A +M +
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171
Query: 311 PTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
+ Y+ +D +TG L M + G + TY L+ + + ++
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ P+ ++TALI+A GK EA ++Y EM + + P+ T
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFT 281
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 183/442 (41%), Gaps = 63/442 (14%)
Query: 49 FTFFLWAGKQSGYAHSTRE----------------YHTMIAILGKVRKFDTAWALIDEMR 92
F L QSG +H + Y+T+I L K ++ A L EM+
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
GGE P+ VT L I +C DV ++ + + L+S C
Sbjct: 192 GGECKPNSVTFSAL---IDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKG 248
Query: 153 NVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
+++ + L K+V P N +++ ++N C +EA ++ M+ + DVV+
Sbjct: 249 DIERGKELFNEMLRKNVTP-NVVTYSCLMNALCKK-QKWKEAAQMLDTMTGCKVRPDVVA 306
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ + SK +++ D M + G E + YNA+I+ L K V DA+ ++++M
Sbjct: 307 YTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMA 366
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEA--------------------------------- 297
+KG P+VVTY++L+K LC K+DEA
Sbjct: 367 KKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRR 426
Query: 298 ----RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIM 350
++ + M++RG I TY+ +D + ++ LE + G P TY +
Sbjct: 427 LRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTV 486
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI + + ++N+ +G P S Y L+ +L +E+A + EM+
Sbjct: 487 LINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546
Query: 411 LLPEPKTDELLQDWSYNKQFVE 432
P+ + ++ D + VE
Sbjct: 547 HDPDVVSFNIIIDGTLKAGDVE 568
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 17/365 (4%)
Query: 61 YAHSTREY---HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Y +S Y +T+I L K + +D ++ +M P + L LI +
Sbjct: 52 YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTS---LSALIESFVNTQ 108
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSF 175
A + F + + +F LL C+ + A L FC ++ + S+
Sbjct: 109 KPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL-FCMMKRNCLIPDCVSY 167
Query: 176 NIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
N ++NG C R EA+ ++ EM + V+FS +I + K ++ + L ++
Sbjct: 168 NTVINGLCK---GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M++MG+E D VY+A+I ++ L M K V PNVVTY+ L+ LCK +K
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
EA Q D M + P + Y D + + G + +L+ M K G +P N TY
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + + + + +++ G PD +Y+ L+ L GK++EA + K+
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 411 LLPEP 415
+P
Sbjct: 405 FHIKP 409
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 149/356 (41%), Gaps = 47/356 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L K + D A +++ M P +VT TL ++ C V + A++
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL---VKGLCGVGKIDEAVDLLN 398
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
+F + DVF +FN+++ C
Sbjct: 399 LLMSKEFHI---------------------------KPDVF-----AFNLVIQELCKQ-R 425
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
R A+RV+ M +RG ++V+++ +I Y A L K L L+ GI + Y
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT 485
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I+ L K +++ A L G P V YN+L+ LC+ +++AR F EM
Sbjct: 486 VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545
Query: 308 GISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQ-------PTNDTYIMLIKKFSRWRQ 360
P + +++ +D G G +ES +++ + P N T+ +LI +F + Q
Sbjct: 546 NHDPDVVSFNIIID----GTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQ 601
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
++ + G+ PD + +L+ L GK E+ +M +K ++ + K
Sbjct: 602 LDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSK 657
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 38/226 (16%)
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
+RG +V +F+ ++ + ++ + HK + LF MKR N +I
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR----------NCLI---------- 161
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
P+ V+YN++I LCK ++L EA++ F EM P T+ A +
Sbjct: 162 ---------------PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALI 206
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + G EE FGLLE M KMG + Y LI F +++NE+
Sbjct: 207 DGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVT 266
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
P+ +Y+ L++AL K +EA Q M ++ P+ +L D
Sbjct: 267 PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ------------ 104
KQ H+ R Y+TM+ R F + + + G +TK
Sbjct: 423 KQRRLRHAKRVYYTMVE-----RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGI 477
Query: 105 -----TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
T +LI C + + A F + + ++ L+++LCR +V+ A +
Sbjct: 478 SPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARN 537
Query: 160 LM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
L N + P + SFNII++G G A+ + +EM + D ++FS +I+
Sbjct: 538 LFQEMRNANHDP-DVVSFNIIIDGTLKA-GDVESAKELLLEMLNMNLVPDNITFSILINR 595
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ K L + L+++M G D ++++++ + + +S+++ M +K V +
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655
Query: 278 VVTYNSLIKPLCKARK 293
++++ LC K
Sbjct: 656 SKLTSTILACLCNMSK 671
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 16/368 (4%)
Query: 62 AHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGR 121
A Y+T++ L K A ++D E P ++T ILI C VG+
Sbjct: 156 APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT---ILIEATCKESGVGQ 212
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-----NTKSFN 176
A+ + + + L++ +C+ + +A + F N P N + N
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA--IKFLNN--MPSYGCQPNVITHN 268
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
IIL C+ G +AE++ +M ++G VV+F+ +I+ + L + + + ++M
Sbjct: 269 IILRSMCST-GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 327
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + YN ++H K + + AI + M +G P++VTYN+L+ LCK K+D
Sbjct: 328 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + +++ +G SP + TY+ +D + + G E LL+ MR+ G +P TY L+
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
SR + K ++++ G P+ +Y +++ L + + + A + M K+ P
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 507
Query: 414 EPKTDELL 421
T +L
Sbjct: 508 TEATYTIL 515
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 149/308 (48%), Gaps = 6/308 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
LIR +C + +A ++ + + L+S C+ + +A ++ +V
Sbjct: 98 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLD-RMNVA 156
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P + ++N IL C+ G ++A V Q+ DV++++ +I K + + +
Sbjct: 157 P-DVVTYNTILRTLCDS-GKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+L D+M+ G + D YN +I+ + K + +AI + +M G PNV+T+N +++ +
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTN 345
C + +A + +ML++G SP++ T++ ++ + R G +LE M GC P +
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
+Y L+ F + ++ + + + G PD +Y L+ AL +GK++ A + +
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 406 MKEKQLLP 413
+ K P
Sbjct: 395 LSSKGCSP 402
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 22/330 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y+ +I + K + D A ++ M P+++T I++R C+
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN---IILRSMCST 277
Query: 117 HDVGRAINA---FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--- 170
GR ++A R + + F L++ LCR + A ++ + P
Sbjct: 278 ---GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL----EKMPMHGC 330
Query: 171 --NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
N+ S+N +L+G+C R E + + M RG D+V+++ +++ K + +
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDI-MVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ +Q+ G YN VI L+K + AI L+ M KG+ P+++TY+SL+ L
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTN 345
+ K+DEA + F ++ GI P TY++ + + R + L M C+PT
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 509
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
TY +LI+ + + NE+ G
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 18/280 (6%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M RG D++ + +I + + K + + +++ G D YN +I K
Sbjct: 83 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 142
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
+ +A+ ++ M VAP+VVTYN++++ LC + KL +A + D LQ+ P + TY
Sbjct: 143 IDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 199
Query: 319 FLDII--RTG-EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
++ +G + LL+ MR G +P TY +LI + + K N + G
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQI 435
P+ ++ ++ ++ G+ +A + +M K P T +L ++ + + R I
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319
Query: 436 ASLKAHQPQSGQNTRVIS-----------KKSDQDREFLQ 464
L+ P G +S KK D+ E+L
Sbjct: 320 DILE-KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + S ++ +I L + A ++++M P+ ++ LL +C
Sbjct: 292 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL---HGFCKEK 348
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 175
+ RAI I + LL+ALC+ V A ++ +K P ++
Sbjct: 349 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITY 407
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G + G + A ++ EM ++G+ D++++S ++S S+ + + ++ F ++
Sbjct: 408 NTVIDGLSKV-GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 466
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+GI + YN+++ L K R AI + M K P TY LI+ +
Sbjct: 467 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 526
Query: 296 EARQAFDEMLQRGI 309
EA +E+ RG+
Sbjct: 527 EALDLLNELCSRGL 540
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
++D ++SM +G P+++ SLI+ C+ K +A + + Q G P + TY+
Sbjct: 73 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132
Query: 319 FLDIIRTGEEVFGLLESMRKMG-----------------------------------CQP 343
+ E+ L+ + +M C P
Sbjct: 133 LISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +LI+ + G K+ +E+ G+ PD +Y LI+ + G+L+EA ++
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 252
Query: 404 MEMKEKQLLPEPKTDELL 421
M P T ++
Sbjct: 253 NNMPSYGCQPNVITHNII 270
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 154/326 (47%), Gaps = 19/326 (5%)
Query: 101 VTKQTLLILIRRYCAVHDVGRAIN-AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
V TL LI+ C + A++ F + + + L+ LC K Q+A
Sbjct: 124 VQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALE 183
Query: 160 LMF---------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
L+ C+ +V +NT +++G+ G +A ++ EM +G+ DVV+
Sbjct: 184 LLIHMTADGGYNCSPNVVSYNT-----VIDGFFKE-GEVDKAYFLFHEMMGQGLPPDVVT 237
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ +I KA+ + K + + M G+ D + YN +I +++A+ L+K M
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE--- 327
G+ P+VVTY+ LI+ CK + EAR FD M+++G P YH L T
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
+V LL+ M + G + + +LI +++ + E+ +NG PD SY+ +I
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLP 413
H L G++E+A ++ +M + L P
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSP 443
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 12/371 (3%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+A F F G+ G Y+++I L K + D A A++ M P +T
Sbjct: 218 KAYFLFHEMMGQ--GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD---TRT 272
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FC 163
I+IR YC++ + A+ + + L+ C+ +A +
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
K P N+ ++I+L+G+ G+ + + M + GI ++ +F+ +I Y+K
Sbjct: 333 RKGQKP-NSTIYHILLHGYATK-GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ K + F +M++ G+ D Y+ VIH L K V+DA+ M +G++PN++++ S
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMG 340
LI LC + + + EM+ RGI P + +D + + G E + + +G
Sbjct: 451 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 510
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P +Y LI + + K + + G PD +Y +L++ F NG++E+A
Sbjct: 511 VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570
Query: 401 QYYMEMKEKQL 411
Y EM K +
Sbjct: 571 ALYREMFRKDV 581
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 8/354 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G TR Y+ MI + + + A L+ +M G P +VT +LI+ YC +
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS---LLIQYYCKIGRC 321
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNII 178
A + F + R + LL + D L+ +D PF ++FNI+
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
+ + G+ +A + EM Q G+ DVVS+S +I K + + F+QM G
Sbjct: 382 ICAYAKH-GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
+ + + ++IH L K L M +G+ P+ + N+++ LCK ++ EA+
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500
Query: 299 QAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
FD ++ G+ P + +Y+ +D + +E L+ M +G +P + TY L+ +
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+ + + ++ E+ + ++H LF G++ A + YM+M ++
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR 614
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 178/411 (43%), Gaps = 56/411 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMR---GGETGPSLVTKQTLLILIRRYCAV 116
GY Y+ +I L +K A L+ M G P++V+ T+ I +
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTV---IDGFFKE 213
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+V +A F+ + + L+ LC+ + + A ++ +K V P +T++
Sbjct: 214 GEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP-DTRT 272
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+NI++ G+C++ G EA R+ +MS G+ DVV++S +I Y K + +FD M
Sbjct: 273 YNIMIRGYCSL-GQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331
Query: 235 KRMGIECDRKVYNAVIHALA-KGRL--VKDAISLM------------------------- 266
R G + + +Y+ ++H A KG L V+D + LM
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391
Query: 267 -------KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
M + G+ P+VV+Y+++I LCK ++++A F++M+ G+SP I ++ +
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451
Query: 320 L-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ + GE +V L M G P ++ + + ++ + G
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
PD SY LI GK++E+ + M L P+ W+YN
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD--------SWTYN 554
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 159/359 (44%), Gaps = 16/359 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G R ++ +I K D A EMR P +V+ T++ ++ +
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK----- 422
Query: 118 DVGRAINAFYAYKRF---KFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNT 172
GR +A Y + + + I F L+ LC + E L F N+ + P +
Sbjct: 423 -TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP-DA 480
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
N I++ C G EA+ + + G+ DVVS++ +I Y + + ++ D
Sbjct: 481 IFMNTIMDNLCKE-GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLD 539
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M +G+ D YN++++ K V+DA++L + M K V +T N ++ L +A
Sbjct: 540 RMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAG 599
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYI 349
++ AR+ + +M+ RG I TY+ L + +E + E +R + T+
Sbjct: 600 RIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFS 659
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
++I + + +++ + G PD +Y+ +I + G LEE+ ++ M++
Sbjct: 660 IVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEK 718
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 164/380 (43%), Gaps = 12/380 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q+G Y T+I IL K + + A ++M P++++ + LI C++
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS---LIHGLCSI 458
Query: 117 HDVGRAIN-AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTK 173
+ + AF R I ++ LC+ V +A+ M + V P +
Sbjct: 459 GEWKKVEELAFEMINRGIHPDAIF-MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP-DVV 516
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
S+N +++G+C +G E+ + M G+ D +++ +++ Y K + L L+ +
Sbjct: 517 SYNTLIDGYC-FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M R ++ N ++H L + + A L M ++G + TYN+++ LC+
Sbjct: 576 MFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSC 635
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIM 350
+DEA + F+++ + +RT+ ++ +++ G +E L +M G P TY +
Sbjct: 636 VDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSL 695
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+IK ++ + +NG D ++ L G + A Y ++ EK
Sbjct: 696 MIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKN 755
Query: 411 LLPEPKTDELLQDWSYNKQF 430
E T LL K++
Sbjct: 756 FSLEASTAALLIPIVSEKKY 775
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 13/269 (4%)
Query: 169 PFNTKSFNIILNGWCNIIGSSRE------AERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
P + +FN +L SS A ++ M + G+ +I C+
Sbjct: 46 PASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVG 105
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM-KSMEEKGVAPNVVTY 281
L F + G N +I L G DA+ ++ + M E G P+V +Y
Sbjct: 106 RLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSY 165
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG---ISPTIRTYHAFLD-IIRTGE--EVFGLLES 335
N+LIK LC +K EA + M G SP + +Y+ +D + GE + + L
Sbjct: 166 NALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHE 225
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M G P TY LI + + + + + G PD +Y +I G+
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 396 LEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
LEEA + +M L P+ T LL +
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 14 KRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIA 73
K +E+ +++ G++ + +++ +L R + L G S Y+ ++
Sbjct: 380 KANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLL 439
Query: 74 ILGKVRKFDTAWALIDEMRGGETGPSLVT-KQTLLILIRRYCA--VHDVGRAI------- 123
L ++ K + A L D+M G PSLV+ +L ++ C H+V I
Sbjct: 440 WLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKP 499
Query: 124 NAF----------------YAYKRFK--FAVGIED----FQGLLSALCRYKNVQDAEHLM 161
NA +A+ F A GI F +++ LC+ V +A +
Sbjct: 500 NAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKL 559
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
F + P + ++N I++G+ G+ AE V+ EM + I +V++++ +I+ +
Sbjct: 560 NTFIKQSFIP-TSMTYNCIIDGYVKE-GAIDSAESVYREMCRSEISPNVITYTSLINGFC 617
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K+ + L++ D MKR G+E D VY +I K + +++A + E G+ PN +
Sbjct: 618 KSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTI 677
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESM 336
YN +I ++ A EM+ I ++ Y + +D +++ G+ F L M
Sbjct: 678 VYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEM 737
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
G P Y +LI Q N K+ E+ N P Y LI F G L
Sbjct: 738 LCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797
Query: 397 EEAHQYYMEMKEKQLLPEPKTDELL 421
+EA + + EM +K L+P+ T ++L
Sbjct: 798 QEAFRLHDEMLDKGLVPDDTTYDIL 822
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 42/259 (16%)
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
P N ++ G+C + G A R++ E+ + G+ +V FS +I SK N+ K
Sbjct: 324 PVNVAVATSLIKGYC-VRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKAN 382
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
L+ +MK MG++ + N ++ K L+++A L+ E G+A +VVTYN ++ L
Sbjct: 383 ELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWL 441
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
C+ K++EA +D+M+ +GI+P++ +Y+ ++ K GC +D +
Sbjct: 442 CELGKVNEACNLWDKMIGKGITPSLVSYNH-------------MILGHCKKGCM--DDAH 486
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+V N I E+G P+ +YT L+ F G E A + +M
Sbjct: 487 -----------------EVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVA 529
Query: 409 KQLLPEPKTDELLQDWSYN 427
++P D+++N
Sbjct: 530 AGIVP--------TDYTFN 540
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 168/401 (41%), Gaps = 30/401 (7%)
Query: 26 GIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHTMIAILGKVRKFDTA 84
G+K+ + S V+ V + L G + G+ S Y +I ++ F A
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA 311
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
L DEM ++ +L I+ YC DV A+ F + F L
Sbjct: 312 LRLKDEMVDSRVPVNVAVATSL---IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVL 368
Query: 145 LSALCRYKNVQDAEHL------MFCNKDVFPFN--TKSF---NIILNGWCNIIGSSREAE 193
+ + NV+ A L M VF N K F N++ N + + G+
Sbjct: 369 IEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV---- 424
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
+ GI VV+++ ++ + +++ L+D+M GI YN +I
Sbjct: 425 -------ENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGH 476
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K + DA +M + E G+ PN +TY L++ K + A FD+M+ GI PT
Sbjct: 477 CKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTD 536
Query: 314 RTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
T+++ ++ + + G E L + K PT+ TY +I + + + V+ E
Sbjct: 537 YTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYRE 596
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ + P+ +YT+LI+ + K++ A + + +MK K L
Sbjct: 597 MCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGL 637
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 166/408 (40%), Gaps = 27/408 (6%)
Query: 30 SSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILG-KVRKFDTAWALI 88
S + V + L + D +A FF + G+A + ++ IL A L+
Sbjct: 60 SQKQVLDTLLLHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLL 119
Query: 89 DEMRGGETGPSLVTKQTLLI------------------LIRRYCAVHDVGRAINAFYAYK 130
++ G++ P+ LL+ L+ Y + + A+ F A
Sbjct: 120 NKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAML 179
Query: 131 RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGS 188
+ LL+A+ R V+DA L + ++ + + +++ C G
Sbjct: 180 EDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYG-DCYTLQVLMRA-CLKGGK 237
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
EAER + + + RG+ D S+S +I + +L +L + + +G Y A
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
VI A + +A+ L M + V NV SLIK C ++ A + FDE+++ G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357
Query: 309 ISPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVF 365
++P + + ++ I E+ L M+ MG QPT L+K F + N +
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417
Query: 366 KVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + ENG +Y ++ L GK+ EA + +M K + P
Sbjct: 418 LLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITP 464
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 17/281 (6%)
Query: 156 DAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
DA+HL+ NK VF + + +++ AER ++S + F+ ++
Sbjct: 114 DAKHLL--NKYVFGDSAPAAKVLVELLVEC------AERYGFKLSDSRV------FNYLL 159
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
Y +A + + + F M G+ N ++ A+ + +V+DA L M E+ +
Sbjct: 160 ISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIY 219
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGL 332
+ T L++ K K EA + F + RG+ +Y + + G ++ L
Sbjct: 220 GDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKL 279
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
+E ++G P+ TY +I R FG ++ +E+ ++ + + T+LI +
Sbjct: 280 VEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCV 339
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
G + A + + E+ E + P +L +W VE+
Sbjct: 340 RGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEK 380
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I K K D A + D+M+ + TL I +C + D+ A F
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATL---IAGFCKMQDMENACKFFS 665
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF----PFNTKSFNIILNGWC 183
+ ++SA Y+N+ + E + +K++ P + K + +++G
Sbjct: 666 KLLEVGLTPNTIVYNIMISA---YRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLL 722
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G A ++ EM RGI D+ ++ +I+ L ++ +M I
Sbjct: 723 KE-GKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+YN +I K +++A L M +KG+ P+ TY+ L+
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 6/300 (2%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ +++A CR A L+ ++ N ++ ++ G G ++A+ + EM
Sbjct: 610 YNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA-GVVKKAKFLLNEM 668
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+ G ++ ++ S +R +L + + M G+ D VYN ++H L +
Sbjct: 669 ASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMA 728
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++A ++ M +G+AP+ +T+N+LI CK+ LD A + +ML +G+SP I T++
Sbjct: 729 RNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTL 788
Query: 320 LDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L + + E +L M+K+G +P N TY +L+ +++ +++ E+ G
Sbjct: 789 LGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGF 848
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQI 435
P S+Y +L+ G + +A + + EMK + +L T D LL WS + +E +I
Sbjct: 849 IPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRI 908
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGI-CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
L G C A M + RGI DVV ++ +I Y K +++ L + ++M
Sbjct: 157 LVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQ 216
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G+ D YN+++ A+ +++ M+ GV PNVVTY +LI CK + +DEA
Sbjct: 217 GVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEA 276
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKK 354
++ M++ G+ P + T A +D + R G+ E + L M K+G P + TY LI
Sbjct: 277 FSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDS 336
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ R+ + E+ G D YTAL+ L GK+EEA + + P
Sbjct: 337 LAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPN 396
Query: 415 PKTDELLQD 423
T +L D
Sbjct: 397 FVTYTVLVD 405
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 145 LSALCRYKNVQDAEHL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQ 201
L LCR V +A L + + + + +N +++G+C + + A V M+
Sbjct: 157 LVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMA-AALAVVERMTT 215
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
+G+ DVV ++ +++ + + + L + ++MK G+E + Y A+I KG+ + +
Sbjct: 216 QGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDE 275
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A SL + M GV P+VVT ++L+ LC+ + EA F EM + G++P TY +D
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID 335
Query: 322 II---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ R G E GLL M G Y L+ + + + V + P
Sbjct: 336 SLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP 395
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +YT L+ A G ++ A Q ++M+EK ++P T
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVT 434
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 18/345 (5%)
Query: 77 KVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV 136
KV+ A A+++ M +V +L+ G A A +R K A
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLV------AGFFHSGDADAALEVVERMK-AD 251
Query: 137 GIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
G+E + L+ C+ K + +A L V P + + + +++G C G
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP-DVVTLSALVDGLCRD-GQFS 309
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
EA ++ EM + G+ + V++ +I +KAR + L L +M G+ D +Y A++
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
L K +++A +++ + + PN VTY L+ C+A +D A Q +M ++ +
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429
Query: 311 PTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P + T+ + ++ + + + MRKM G P TY LI F +++ V
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
+ ++ G + +L++ L NG +E A + +M E+ LL
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL 534
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 18/359 (5%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + +G Y+TMIA + K A L+ EM+ P+L+T TL++ +
Sbjct: 594 FLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLL 653
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMF---CNK 165
V +N + FA Q +L A R + + LM +
Sbjct: 654 EAGVVKKAKFLLNEMASA---GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHA 710
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
D+ +NT + +G +R A V EM RGI D ++F+ +I + K+ +L
Sbjct: 711 DITVYNTLVHVLCCHGM------ARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLD 764
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
++ QM G+ + +N ++ L + +A +++ M++ G+ PN +TY+ L+
Sbjct: 765 NAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
K EA + + EM+ +G P TY++ + D + G + L M++ G
Sbjct: 825 TGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVL 884
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
T+ TY +L+ +S+ R V + ++ E G P + + +++ A G EA +
Sbjct: 885 HTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 157/357 (43%), Gaps = 14/357 (3%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL-ILIRRYCAVHDVGRAINAF 126
Y ++ + D A ++ +M P++VT +++ L++R C +G+A +
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC----LGKAADYM 455
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
K A + + L+ ++ Q E + +D+ ++ N +++ N +
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKF---QGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512
Query: 187 ---GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
G+ AE ++ +M +RG+ D V+++ ++ K N+ ++ ++ + D
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
VYN I+ L +A S +K M G+ P+ TYN++I C+ K +A + E
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Query: 304 MLQRGISPTIRTYHAF-LDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
M + I P + TY + ++ G ++ LL M G PT+ T+ +++ S R+
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRR 692
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ ++ + G D + Y L+H L +G A EM + + P+ T
Sbjct: 693 PDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 46/320 (14%)
Query: 144 LLSALCRYKNVQDAEHLMFCNKDV----FPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
L++ L + N++ AE L KD+ + ++ +++G G+ A +V E+
Sbjct: 508 LVNGLRKNGNIEGAEALF---KDMDERGLLLDHVNYTTLMDGLFKT-GNMPAAFKVGQEL 563
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
++ + D V ++ I+C + +M+ G+E D+ YN +I A +
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKT 623
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A+ L+K M+ + PN++TY +L+ L +A + +A+ +EM G +PT T+
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683
Query: 320 LD----------IIRTGEEVFG----------------------------LLESMRKMGC 341
L I+ E + G +L+ M G
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
P T+ LI + N F ++ ++ G P+ +++ L+ L G++ EA
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803
Query: 402 YYMEMKEKQLLPEPKTDELL 421
+MK+ L P T ++L
Sbjct: 804 VLSDMKKVGLEPNNLTYDIL 823
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A T ++ +I K D A+A+ +M P++ T TLL +
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLL------GGLESA 795
Query: 120 GRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFC---NKDVFPFNT 172
GR A K VG+E + L++ + N +A L +C +K P
Sbjct: 796 GRIGEADTVLSDMK-KVGLEPNNLTYDILVTGYAKKSNKVEALRL-YCEMVSKGFIP-KA 852
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++N +++ + G +A+ ++ EM +RG+ + ++ +++ +SK RN +V L
Sbjct: 853 STYNSLMSDFAKA-GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLK 911
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM 269
MK +G + + +++ A ++ + +A L+K++
Sbjct: 912 DMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 144 LLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LL LC ++A +++ P N S++I+L C+ S R + + M
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELGCVP-NAVSYSIVLKALCDNSMSQRALDLLQMMAK 256
Query: 201 QRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
Q G C DVV++S +I + K LF +M R G++ D YN +I AL K R +
Sbjct: 257 QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
A +++ M G P+ VTY+ +I +L EA + F EM +RG+ P I T ++F
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376
Query: 320 L-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
L + + G +E +SM G +P +Y L+ ++ F ++ ++N + NG
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ +T LIHA G +++A + EM+++ + P+ T
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 20/302 (6%)
Query: 144 LLSALCRYKNVQDAEHLM--------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+L ALC Q A L+ C+ DV ++T +++G+ N G + +A +
Sbjct: 234 VLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYST-----VIHGFFNE-GETGKACSL 287
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM+++G+ DVV+++ II KAR + K + QM G + D Y+ +IH A
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYAT 347
Query: 256 -GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
GRL K+A + + M+++G+ PN+VT NS + LCK + EA + FD M +G P I
Sbjct: 348 LGRL-KEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406
Query: 315 TYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+Y L + ++ GL SM+ G + +LI +++ + ++ E+
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQF 430
+ G PD +Y+ +I G+L +A + + +M + + P ++Q + +
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526
Query: 431 VE 432
V+
Sbjct: 527 VK 528
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 165/366 (45%), Gaps = 17/366 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K +G A + + +I K D A + EM+ P +VT T++ R
Sbjct: 432 KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR---- 487
Query: 117 HDVGRAINAFYAYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLM--FCNKDVFPF 170
+GR +A + + A GI+ + ++ C + + A+ L+ NK +
Sbjct: 488 --MGRLTDAMEKFNQM-VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRL 230
+ F+ ++N C G +A ++ + G V++F+ +I Y + K ++
Sbjct: 545 DIVFFSSVINSLCKD-GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603
Query: 231 FDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
D M+ +G+E D YN ++ K + D ++L + M+ KGV PN VTY ++ L +
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663
Query: 291 ARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDT 347
A + AR+ F EM++ G + T+ Y L + +E L + + M + +
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
+I + ++ +++ IS +G P+ S+Y +I L +G +E+A+ + M+
Sbjct: 724 LNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME 783
Query: 408 EKQLLP 413
+ ++P
Sbjct: 784 KSGIVP 789
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 183/452 (40%), Gaps = 81/452 (17%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEM--RGGETGPSL 100
N E A L + G + Y ++ L A L+ M +GG P +
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL 160
V T+ I + + G+A + F+ R + + ++ ALC+ + + AE +
Sbjct: 266 VAYSTV---IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 161 MF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVV---------- 209
+ D +T +++ +++G+ +G +EA +++ EM +RG+ ++V
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYAT-LGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381
Query: 210 -------------------------SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
S+ ++ Y+ ++ LF+ MK GI +
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
V+ +IHA AK +V DA+ + M+++GV+P+VVTY+++I + +L +A + F++M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501
Query: 305 LQRGISPTIRTYHAFL---------------------------DIIRTGEEVFGLLESMR 337
+ RGI P Y + + DI+ + L + R
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561
Query: 338 KM------------GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
M G +P T+ LI + + FK+ + + G PD +Y
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L+ F NG++ + + EM+ K + P T
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C +AR L LF + R G++ D+ N ++ L ++A++ L+
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTY----HAFLDI 322
M E G PN V+Y+ ++K LC A M ++G SP + Y H F +
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
TG+ L M + G +P TY ++I + R V +++ +G PD +
Sbjct: 279 GETGKAC-SLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
Y+ +IH G+L+EA + + EMK++ L+P
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIP 368
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGR----LVKDAISLMKSM------EEKGV---AP 276
+FD++ R + N + ALA+ + D +L ++ EE G P
Sbjct: 96 MFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCREEAGTQVAVP 155
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RTGEEVFGL 332
TYN L+ C+AR+ D F +L+ G+ T + L + RT E V L
Sbjct: 156 TFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVL 215
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG--PDRSSYTALIHAL 390
L M ++GC P +Y +++K + +++ G PD +Y+ +IH
Sbjct: 216 LHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGF 275
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKT-----DELLQDWSYNK-QFVERQIASLKAHQPQ 444
F G+ +A + EM + + P+ T D L + + +K + V RQ+ + A QP
Sbjct: 276 FNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA-QPD 334
Query: 445 S 445
+
Sbjct: 335 T 335
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 7/219 (3%)
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++T +L I YC V + +A A + I + LL + + D
Sbjct: 579 PGVITFNSL---IDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635
Query: 158 EHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L K V P NT ++ I+L G G + A + + EM + G V + I+
Sbjct: 636 LTLFREMQRKGVKP-NTVTYGIMLAGLFRA-GRTVAARKKFHEMIESGTTVTVSIYGIIL 693
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + + LF ++ M ++ + N +I+A+ K + ++A L ++ G+
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
PN TY +I L K +++A F M + GI P R
Sbjct: 754 PNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSR 792
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 9/223 (4%)
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
V K D A+ ++D M P +VT TLL + ++D + F +R
Sbjct: 594 VGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIND---GLTLFREMQRKGVKPN 650
Query: 138 IEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ +L+ L R A H M + + + IIL G C + EA
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI--YGIILGGLCRN-NCADEAII 707
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
++ ++ + + + + +I+ K + + LF + G+ + Y +I L
Sbjct: 708 LFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLL 767
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
K V+DA ++ SME+ G+ P N +I+ L + ++ +A
Sbjct: 768 KDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 177/402 (44%), Gaps = 17/402 (4%)
Query: 27 IKVSSELVSEVLSWVR--NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTA 84
+ S EL V+ R N E F + ++ G S + Y+ ++ L F
Sbjct: 105 VPCSQELFQFVIKCYRRSNLGEQGLKMF-YRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163
Query: 85 WALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGL 144
AL + M+ P++ T +L++ C V A + +
Sbjct: 164 NALYNNMKSEGLEPNVFTYN---VLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTV 220
Query: 145 LSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
+S++C+ +V A L + V P +N +++G C +EA + EM RG+
Sbjct: 221 ISSMCKLGDVDKARELAMKFEPVVPV----YNALIHGVCKEC-RFKEAFDLMNEMVDRGV 275
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAI 263
+V+S+S +ISC S N+ L +F +M G + + + ++I +GR V DA+
Sbjct: 276 DPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGR-VGDAV 334
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII 323
L M +GV+PNVV YN+LI LC +DEA +++M + I P + TY +
Sbjct: 335 GLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGF 394
Query: 324 RTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
++ E+ KM GC+P Y ++ + F F + + + +G P
Sbjct: 395 AKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTV 454
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT-DELL 421
++ I L G++E A +M++ + LP +T +ELL
Sbjct: 455 ITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELL 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 158/341 (46%), Gaps = 18/341 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I + K +F A+ L++EM P++++ T++ + D+G +
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI------SCLSDMGNVELSLA 300
Query: 128 AYKRFKFAVG----IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNG 181
+ R F G ++ F L+ V DA L + + V P N ++N +++G
Sbjct: 301 VFGRM-FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSP-NVVAYNTLIHG 358
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C+ G+ EA VW +M + I +V ++S II ++K+ +L +++M G
Sbjct: 359 LCSD-GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRP 417
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ VY ++ L + + A L+ +M G P V+T+N+ IK LC+A +++ A
Sbjct: 418 NVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVL 477
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
D+M + P IRTY+ LD + R E GL+ + + + TY ++ FS
Sbjct: 478 DQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFN 537
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
V ++ ++ NG D + ++A GK++ A
Sbjct: 538 GMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTA 578
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 39/254 (15%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y M+ +L ++ FD A+ LID M P+++T I+ C V A+N
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNF---IKGLCRAGRVEWAMNVLD 478
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
++++ I + LL L F +F
Sbjct: 479 QMEKYECLPNIRTYNELLDGL---------------------FRANAF------------ 505
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
REA + E+ +R + +D V+++ I+ +S +VL+L +M GI+ D N
Sbjct: 506 --REACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVN 563
Query: 248 AVIHALAKGRLVKDAISLMKSME-EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++A K VK AI ++ ++ EK +++T+ ++ +C +EA EML+
Sbjct: 564 TTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLK 623
Query: 307 RGISPTIRTYHAFL 320
RGI P I T++ +
Sbjct: 624 RGIFPNIATWNVLV 637
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 8/208 (3%)
Query: 209 VSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
+++ +I + + V L QMK + C ++++ VI + L + + +
Sbjct: 75 LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYR 134
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE 328
+ E G P+V YN ++ L ++ M G+ P + TY+ L + +
Sbjct: 135 IREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGK 194
Query: 329 VFG---LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTA 385
V G LL M GC P + +Y +I + G+V K E++ P Y A
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCK---LGDVDKA-RELAMKFE-PVVPVYNA 249
Query: 386 LIHALFLNGKLEEAHQYYMEMKEKQLLP 413
LIH + + +EA EM ++ + P
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDP 277
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 10/374 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y +I L K+ + A ++ ++ G ++V T+ I C V
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTI---IDGLCKDKLV 209
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + + + F L+ C +DA L K++ P + +FNI
Sbjct: 210 TDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINP-DAYTFNI 268
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++ C G +EA+ V M + G+ VV+++ ++ Y + K + + RM
Sbjct: 269 LVDALCKE-GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + + YN +I+ K ++V +A+ L M +G+AP+ VTYNSLI LCKA ++ A
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKK 354
+ DEM I I TY++ +D+ + V L++ +++ G QP TY +LI
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ Q N V+ ++ G + +Y +I+ L G +EA +M++ ++P+
Sbjct: 448 LCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPD 507
Query: 415 PKTDELLQDWSYNK 428
T E + ++K
Sbjct: 508 AVTYETIIQALFHK 521
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 39/331 (11%)
Query: 78 VRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
V KF A+ L +EM P T IL+ C + A N +
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPD---AYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPT 297
Query: 138 IEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + L+ C V A+H++ V P N++S+NI++NG+C I EA +
Sbjct: 298 VVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP-NSRSYNIMINGFCKI-KMVDEALCL 355
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM RGI V+++ +I KA + L D+M I D YN++I K
Sbjct: 356 FHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCK 415
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ V AI+L+K ++E G+ PN+ TYN LI LCK +L A+ F ++L +G + T
Sbjct: 416 NQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWT 475
Query: 316 YHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
Y+ ++I + F + +++ +NG
Sbjct: 476 YN--------------------------------IMINGLCKEGLFDEAEVLLSKMEDNG 503
Query: 376 NGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
PD +Y +I ALF + E+A + EM
Sbjct: 504 IIPDAVTYETIIQALFHKDENEKAQKLLREM 534
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 170/421 (40%), Gaps = 99/421 (23%)
Query: 64 STREYHTMIAILGKVRK-FDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA 122
S E++ ++ L K + + T +L +M P L T L ILI YC +G+
Sbjct: 65 SIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFT---LSILINCYC---HLGQM 118
Query: 123 INAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFNIIL 179
AF + + L LC V +A L+F + + F N ++ I++
Sbjct: 119 TFAFSVFAKI-----------LKMGLCLNGKVNEA--LLFHDHVLALGFHLNHVTYGILI 165
Query: 180 NGWCNIIGSSREAERVWMEMSQR--------------GICYD------------------ 207
NG C + G +R A +V ++ + G+C D
Sbjct: 166 NGLCKM-GQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRI 224
Query: 208 ---VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
VV+FS +I + RLF++M I D +N ++ AL K +K+A +
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284
Query: 265 LMKSMEEKGVAPNVVTYNSL-----------------------------------IKPLC 289
++ M ++GV P VVTYN+L I C
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTN- 345
K + +DEA F EM RGI+P TY++ +D + + G + L++ M C P +
Sbjct: 345 KIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN-NCIPADI 403
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI F + + + +I E+G P+ +Y LI L G+L+ A + +
Sbjct: 404 VTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQD 463
Query: 406 M 406
+
Sbjct: 464 L 464
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 11/184 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A Y+++I L K + AW L+DEM +VT + LI +C V
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS---LIDVFCKNQHV 419
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCR---YKNVQDA-EHLMFCNKDVFPFNTKSF 175
+AI K + + L+ LC+ KN QD + L+ +V N ++
Sbjct: 420 DKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV---NAWTY 476
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
NI++NG C G EAE + +M GI D V++ II K +L +M
Sbjct: 477 NIMINGLCK-EGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMV 535
Query: 236 RMGI 239
G+
Sbjct: 536 IKGV 539
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 172/387 (44%), Gaps = 27/387 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S + Y +++ LGK R D+ L+ EM P++ T + ++ R
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR------A 271
Query: 120 GRAINAFYAYKRFK---FAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF----PFNT 172
G+ A+ KR + + L+ ALC + + C K+VF
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD-------CAKEVFEKMKTGRH 324
Query: 173 KSFNIILNGWCNIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
K + + +R+ + V W EM + G DVV+F+ ++ KA N +
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
D M+ GI + YN +I L + + DA+ L +ME GV P TY I
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTND 346
K+ A + F++M +GI+P I +A L + + G E + ++ +G P +
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY M++K +S+ + K+ +E+ ENG PD +LI+ L+ +++EA + +M M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 407 KEKQLLPEPKT-DELLQDWSYNKQFVE 432
KE +L P T + LL N + E
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 62/371 (16%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G+ + ++ L K F A+ +D MR P+L T TL+ + R V
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR---V 411
Query: 117 HDVGRAINAF------------YAYKRFKFAVGIE-DFQGLLSALCRYKNVQDAEHLMFC 163
H + A+ F Y Y F G D L + K A +++ C
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
N ++ G REA++++ + G+ D V+++ ++ CYSK
Sbjct: 472 NASLYSLAKA-------------GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + ++L +M G E D V N++I+ L K V +A + M+E + P VVTYN+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
L+ L K K+ EA + F+ M+Q+G P T++ D C
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD-------------------CLC 619
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
ND + +K + G V PD +Y +I L NG+++EA ++
Sbjct: 620 KNDEVTLALKMLFKMMDMGCV-------------PDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 404 MEMKEKQLLPE 414
+MK K + P+
Sbjct: 667 HQMK-KLVYPD 676
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G ++A +M + G + S++ +I K+R + + ++ +M G + Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
++++ L K R + + L+K ME G+ PNV T+ I+ L +A K++EA + M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 307 RGISPTIRTYHAFLDIIRT------GEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQ 360
G P + TY +D + T +EVF E M+ +P TYI L+ +FS R
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVF---EKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 361 FGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+V + W+E+ ++G+ PD ++T L+ AL G EA M+++ +LP T
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 171 NTKSFNIILNGWCNIIGSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
NT + NI+++G G+ +A ++ + MS R ++ +I SK+ L++ +
Sbjct: 854 NTITHNIVISGLVKA-GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF+ M G + +YN +I+ K A +L K M ++GV P++ TY+ L+ LC
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKM-GCQPTN 345
++DE F E+ + G++P + Y+ ++ + EE L M+ G P
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
TY LI K++NEI G P+ ++ ALI L+GK E A+ Y
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 406 MKEKQLLPEPKTDELLQD 423
M P T E L +
Sbjct: 1093 MVTGGFSPNTGTYEQLPN 1110
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 83/425 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++A LGK K A L + M P+ +T TL + C +V A+ +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL---CKNDEVTLALKMLF 632
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAE---HLMFCNKDVFP-FNT----------- 172
+ + ++ L + V++A H M K V+P F T
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLLPGVVKA 690
Query: 173 ----KSFNIILNG------------WCNIIGSSREAERV--WMEMSQR----GICYDVVS 210
++ II N W ++IGS + + S+R GIC D S
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 211 FSCIISCYS-KARNLHKVLRLFDQM-KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKS 268
I YS K N+ LF++ K +G++ YN +I L + +++ A +
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE------------------------- 303
++ G P+V TYN L+ K+ K+DE + + E
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 304 -----------MLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYI 349
M R SPT TY +D + ++G E L E M GC+P Y
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI F + + ++ + + G PD +Y+ L+ L + G+++E Y+ E+KE
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 410 QLLPE 414
L P+
Sbjct: 991 GLNPD 995
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 147/414 (35%), Gaps = 82/414 (19%)
Query: 38 LSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETG 97
L+ D EA F + K G + Y+ M+ KV + D A L+ EM
Sbjct: 478 LAKAGRDREAKQIF--YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 98 PSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA 157
P ++ +L+ + + V A F K K + + LL+ L + +Q
Sbjct: 536 PDVIVVNSLINTLYK---ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ-- 590
Query: 158 EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISC 217
EA ++ M Q+G + ++F+ + C
Sbjct: 591 ---------------------------------EAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
K + L++ +M MG D YN +I L K VK+A+ M +K V P+
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPD 676
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEML---------------------QRGISPTIRTY 316
VT +L+ + KA +++A + L + GI +
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 317 HAFL--DIIRTGEEVF-----------------GLLESMRK-MGCQPTNDTYIMLIKKFS 356
+ I R G+ + L E K +G QP TY +LI
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
V+ ++ G PD ++Y L+ A +GK++E + Y EM +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 177/394 (44%), Gaps = 13/394 (3%)
Query: 22 IEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKF 81
+E +KV LV E+L + + FF WAGK+ + H + Y +I L + R F
Sbjct: 76 LEVLKLKVDPRLVREILK-IDVEVSVKIQFFKWAGKRRNFEHDSTTYMALIRCLDEHRMF 134
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
W I +M G + L ++R V RA++ FY K K +
Sbjct: 135 GEVWKTIQDMVKGSCA---MAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTY 191
Query: 142 QGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
++ L + ++ V + + M FP +T +++ +++ + + A R++ E
Sbjct: 192 NSIILMLMQEGHHEKVHELYNEMCSEVHCFP-DTVTYSALISAFAK-LNRDDSAIRLFDE 249
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M + G+ ++ ++ Y K + + L L +M+ Y +I L K
Sbjct: 250 MKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGR 309
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
V+DA K+M + G P+VV N+LI L ++ L +A + FDEM +P + TY+
Sbjct: 310 VEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNT 369
Query: 319 FLDIIRTGE----EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + E E M+K G P++ TY +LI + + + + E+ E
Sbjct: 370 IIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEK 429
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
G P ++Y +LI+ L + + + A++ + E+KE
Sbjct: 430 GFPPCPAAYCSLINTLGVAKRYDVANELFQELKE 463
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 164/357 (45%), Gaps = 13/357 (3%)
Query: 65 TREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAIN 124
T Y +I+ K+ + D+A L DEM+ P+ TL+ + Y V V A+
Sbjct: 224 TVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGI---YFKVGKVEEALG 280
Query: 125 AFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCN 184
+ + + + + L+ L + V+DA ++ + K++ K +++N N
Sbjct: 281 LVKEMRARRCLLTVFTYTELIRGLGKSGRVEDA-YMTY--KNMLKDGCKPDVVLMNNLIN 337
Query: 185 IIGSS---REAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIE 240
I+G S R+A +++ EM +VV+++ II S + L + F++MK+ GI
Sbjct: 338 ILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIV 397
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
Y+ +I K V+ A+ L++ M+EKG P Y SLI L A++ D A +
Sbjct: 398 PSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANEL 457
Query: 301 FDEMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F E+ + + R Y + + G E L M+K+GC P Y L+ R
Sbjct: 458 FQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVR 517
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ F ++ + ENG PD +S+ +++ L G + A + + +MK + P+
Sbjct: 518 AERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPD 574
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 23/365 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K++G + + Y T++ I KV K + A L+ EMR L+T T LIR +
Sbjct: 251 KENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRC---LLTVFTYTELIR---GL 304
Query: 117 HDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDA------EHLMFCNKDV 167
GR +A+ YK D L++ L R +++DA L+ C +V
Sbjct: 305 GKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNV 364
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
+NT I+ EA + M + GI ++S +I Y K + K
Sbjct: 365 VTYNT-----IIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKA 419
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L L ++M G Y ++I+ L + A L + ++E + Y +IK
Sbjct: 420 LLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKH 479
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPT 344
K +L+EA F+EM + G +P + Y+A + + E E F L +M + GC P
Sbjct: 480 FGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPD 539
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
+++ +++ +R +++ ++ + PD S+ ++ L G EEA +
Sbjct: 540 INSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQ 599
Query: 405 EMKEK 409
EM K
Sbjct: 600 EMSSK 604
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 17/289 (5%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+ +I ILG+ A L DEM+ P++VT T I+ + A + A + F
Sbjct: 333 NNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNT--IIKSLFEAKAPLSEASSWFER 390
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGS 188
K+ + L+ C+ V+ A L+ + K F +C++I +
Sbjct: 391 MKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLE------EMDEKGFPPCPAAYCSLINT 444
Query: 189 SREAER------VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECD 242
A+R ++ E+ + C ++ +I + K L++ + LF++MK++G D
Sbjct: 445 LGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPD 504
Query: 243 RKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFD 302
YNA++ + + + +A SL ++MEE G P++ ++N ++ L + A + F
Sbjct: 505 VYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFT 564
Query: 303 EMLQRGISPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTY 348
+M I P + +++ L + R G EE L++ M G Q TY
Sbjct: 565 KMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITY 613
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 207 DVVSFSC---------IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
D+V SC I+ KA+ +++ L +F Q+K YN++I L +
Sbjct: 143 DMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEG 202
Query: 258 LVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ L M E P+ VTY++LI K + D A + FDEM + G+ PT + Y
Sbjct: 203 HHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIY 262
Query: 317 HAFLDI-IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISE 373
+ I + G EE GL++ MR C T TY LI+ + + + + + + +
Sbjct: 263 TTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLK 322
Query: 374 NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+G PD LI+ L + L +A + + EMK P
Sbjct: 323 DGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAP 362
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 42/236 (17%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G+ Y ++I LG +++D A L E++ G S + + ++I+ +
Sbjct: 428 EKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKEN-CGCS--SARVYAVMIKHFGKCG 484
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
+ AIN F K+ C DV+ ++N
Sbjct: 485 RLNEAINLFNEMKKLG-----------------------------CTPDVY-----AYNA 510
Query: 178 ILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
++ G ++ + R EA ++ M + G D+ S + I++ ++ L +F +MK
Sbjct: 511 LMTG---MVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMK 567
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKA 291
I+ D +N ++ L++ L ++A LM+ M KG +++TY+S+++ + K
Sbjct: 568 NSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKV 623
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 33/206 (16%)
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
KR E D Y A+I L + R+ + ++ M + A + +++ L KA+ +
Sbjct: 110 KRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMV 169
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ A F ++ R PT TY N +ML+++
Sbjct: 170 NRALSVFYQVKGRKCRPTASTY----------------------------NSIILMLMQE 201
Query: 355 FSRWRQFGNVFKVWNEI-SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ V +++NE+ SE PD +Y+ALI A + + A + + EMKE L P
Sbjct: 202 GHHEK----VHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQP 257
Query: 414 EPKTDELLQDWSYNKQFVERQIASLK 439
K L + VE + +K
Sbjct: 258 TAKIYTTLMGIYFKVGKVEEALGLVK 283
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 169/357 (47%), Gaps = 41/357 (11%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K + A L EM P +VT TL+ C + VGR
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI----YGCLI--VGR------ 254
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
K AVG+ + Q LL KN++ DV+ +FNI+++G C G
Sbjct: 255 ----LKEAVGLFN-QMLL------KNIK---------PDVY-----TFNILVDGLCKE-G 288
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
++A V M ++G+ ++V+++ ++ Y + +K +F+ M R G+ D + Y+
Sbjct: 289 EMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYS 348
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
+I+ L K ++V +A++L K M K +APN VTYNSLI L K ++ +A +EM R
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408
Query: 308 GISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G + TY + LD + +V L+ ++ G QP TY +L+ + + +
Sbjct: 409 GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDA 468
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
V+ ++ G D Y +++ L G +EA +M++ +P+ T E L
Sbjct: 469 QAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 41/360 (11%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
E++ +++ L K+ F TA + +M + P L T ILI +C +
Sbjct: 66 EFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN---ILINCFCHL---------- 112
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ F F+V + F K F +T + ++ G C +
Sbjct: 113 -GHLNFAFSVLAKIF-----------------------KLGFHPDTVTITTLIKGLC-LN 147
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G REA ++ +G D VS+ +I+ K L++ ++ + ++ + +Y
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
N +I +L K +LV A L M K + P+VVTY +LI +L EA F++ML
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267
Query: 307 RGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
+ I P + T++ +D + + GE + +L M K G TY L+ + +Q
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
V+N ++ G PD SY+ +I+ L ++EA + EM K + P T L D
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 53/314 (16%)
Query: 6 DILREFSHKRSEMRNKIEECGIKVSSELVSEVLSW---------VRNDWEAAFTFFLWAG 56
+IL + K EM+ + + + S ++++ V+ + +A F F A
Sbjct: 278 NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA- 336
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y MI L K + D A L EM P+ VT +L+ + +Y +
Sbjct: 337 -RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRI 395
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKS 174
D +N + + + + LL ALC+ V A L+ KD + P N +
Sbjct: 396 SDAWDLVNEMHNRGQ---PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP-NIYT 451
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I+++G C G ++A+ V+ ++ +G DV
Sbjct: 452 YTILVDGLCKN-GRLKDAQAVYQDLLIKGYHLDV-------------------------- 484
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K+YN +++ L K L +A+SL+ ME+ G P+ VTY +L++ L + K
Sbjct: 485 ---------KMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535
Query: 295 DEARQAFDEMLQRG 308
D+A + EM+ +G
Sbjct: 536 DKAVKLLREMIVQG 549
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKD 166
L+ Y V +A F R ++ + +++ LC+ K V +A +L +K
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
+ P NT ++N +++G G +A + EM RG DV+++S ++ K + K
Sbjct: 375 MAP-NTVTYNSLIDGLLKY-GRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDK 432
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+ L ++K GI+ + Y ++ L K +KDA ++ + + KG +V YN ++
Sbjct: 433 AITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVN 492
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
LCK DEA +M G P TY +
Sbjct: 493 GLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLV 526
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 189/414 (45%), Gaps = 16/414 (3%)
Query: 16 SEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAI 74
S++ ++ CGI + + +LSW+ + + + +W + G S Y+ MI
Sbjct: 419 SKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILG 477
Query: 75 LGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF 134
+ D+A + EM P+L+T L+ G AF Y R +
Sbjct: 478 HCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD------GYFKKGDTEYAFGLYDRMRG 531
Query: 135 A-VGIEDFQG--LLSALCRYKNVQDA-EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSR 190
+ DF +++ LC+ ++ + L ++ F ++N I++G+ GS
Sbjct: 532 ENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE-GSVN 590
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVI 250
A V+ EM + G+ +V +++ +I+ + K+ N+ L++ D+MK GIE D VY A+I
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
+ + +A L+ ++E G++PN V Y+S+I K + ++ A M+ GI
Sbjct: 651 DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIP 710
Query: 311 PTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
++ Y + +++ G+ +F L M G P TY +LI Q N K+
Sbjct: 711 CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKI 770
Query: 368 WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ P Y LI F G L+EA + + EM +K L+P+ T ++L
Sbjct: 771 LEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDIL 824
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 184/436 (42%), Gaps = 57/436 (13%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D ++A F ++G + Y +I K D A+ + ++M+ + P++
Sbjct: 342 QGDLDSALELFDKM-NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAV--GIED---FQGLLSALCRYKNVQD 156
+L IR Y +A + A K F AV GI + + LLS LC+ + +
Sbjct: 401 NVNSL---IRGYL------KARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSE 451
Query: 157 AEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
A + K V P + S+N ++ G C G A V++EM ++G+ +++++S +
Sbjct: 452 ACSIWEKMVRKGVRP-SVVSYNNMILGHCQQ-GDMDSANGVFVEMLEKGLKPNLITYSVL 509
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGI-----EC-----------------DR--------- 243
+ Y K + L+D+M+ I C DR
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569
Query: 244 ----KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
YN +I K V A+++ M + GV+PNV TY +LI CK+ +D A +
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFS 356
DEM +GI + Y A +D R G+ V LL ++++G P Y +I F
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ + + + G D YT LI L GKL A + Y EM K ++P+
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749
Query: 417 TDELLQDWSYNKQFVE 432
T +L NK +E
Sbjct: 750 TYSVLIHGLCNKGQLE 765
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 177/470 (37%), Gaps = 103/470 (21%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGK-VRKFDTAWALIDEMRGGETGP-- 98
+ND ++A ++F WA ++ G S ++ IL K A L++ + GP
Sbjct: 75 QNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVP 134
Query: 99 SLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
S+V V R I + +R F F LL++ + K + DA
Sbjct: 135 SVV-----------------VARLIES---SRRLDFESDSRVFNYLLNSYVKTKRINDAV 174
Query: 159 HLM--FCNKDVFPFNTKSFNIILNGWC--NIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
KD+ P T NI L+ N+I REA V+ +M+ +G+ D + S +
Sbjct: 175 DCFNSLIEKDIVPCLT-VMNIFLSELVKNNMI---REARDVYNKMASKGVKGDCATISVM 230
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I + L + F + K G+E D + Y+ VI A+ K A+ L++ M +KG
Sbjct: 231 IRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGW 290
Query: 275 AP-----------------------------------NVVTYNSLIKPLCKARKLDEARQ 299
P NVV +L+K CK LD A +
Sbjct: 291 VPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALE 350
Query: 300 AFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
FD+M + GI P TY ++ + G ++ + + M+ PT LI+ +
Sbjct: 351 LFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL 410
Query: 357 RWRQ---------------FGNVF-------------------KVWNEISENGNGPDRSS 382
+ R NVF +W ++ G P S
Sbjct: 411 KARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVS 470
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVE 432
Y +I G ++ A+ ++EM EK L P T +L D + K E
Sbjct: 471 YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 49/320 (15%)
Query: 76 GKVRKFDT--AWALIDEMRGGETGPS--------------------------------LV 101
G +K DT A+ L D MRG PS +
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
T T +I + V A+ + + + + + L++ C+ N+ A +M
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVM 631
Query: 162 --FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
NK + + + +++G+C G A ++ E+ + G+ + V +S +IS +
Sbjct: 632 DEMKNKGI-ELDVTVYCALIDGFCRK-GDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
K +N+ L L +M GI CD ++Y +I L K + A L M KG+ P+++
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG-------EEVFGL 332
TY+ LI LC +L+ A++ ++M ++ ++PT+ Y+ + TG +E F L
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI----TGHFKEGNLQEAFRL 805
Query: 333 LESMRKMGCQPTNDTYIMLI 352
M G P + TY +L+
Sbjct: 806 HNEMLDKGLVPDDTTYDILV 825
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
G C G EA +V EM G +VV + ++ Y K +L L LFD+M GI
Sbjct: 302 GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGIC 361
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+ Y +I K + A + M+ K ++P V NSLI+ KAR +EA +
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL 421
Query: 301 FDEMLQRGISPTIRTYHAFLD-IIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
FDE + GI+ + TY++ L + + G+ E + E M + G +P+ +Y +I +
Sbjct: 422 FDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQ 480
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ V+ E+ E G P+ +Y+ L+ F G E A Y M+ + + P
Sbjct: 481 QGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAP 536
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 167/395 (42%), Gaps = 32/395 (8%)
Query: 48 AFTFFLWAGKQSGY--AHSTREYHTMIAILGKVRKFDTA------------------WAL 87
A F W KQ G H T Y IL K R +D+A AL
Sbjct: 93 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+D + PS+ +LIR Y + A+ F F + +L++
Sbjct: 153 MDTYPLCNSIPSVFD-----LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
+ + K + L +K + P N +FNI++NG C + G+ ++A + +M + G
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICP-NVGTFNILINGLC-VEGNLKKAGNLLKQMEENGFV 265
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+V+++ +++ Y K + L D M GIE D YN I L A L
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI--- 322
+K M ++ ++PN VTYN+LI K K+ A Q F+EM + +SP TY+A +
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ EE LL+ M G + TY L+ + +F ++ + N +
Sbjct: 386 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 445
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT LI L NG L+EA Q M + + P+ T
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 480
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 161/379 (42%), Gaps = 19/379 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K D A L+ M P ++T +L I +C V ++ A
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL---INGFCRVGNIKSAKEIIC 502
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCN---KDVFPFNTKSFNIILNG 181
R + + L+ C++ NV +A + M CN D F + N++++
Sbjct: 503 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF-----TCNVLVSS 557
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G EAE+ MS+ G+ + +++ CII+ Y + FD M + G
Sbjct: 558 LCRD-GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 616
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y +++ L KG + +A + + A + V YN+L+ CK+ L EA F
Sbjct: 617 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 676
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKKFSR 357
D+M+Q + P TY + L + R G+ V + MG P + Y L+ S+
Sbjct: 677 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 736
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
F + E+ + G PD ++ A+I + G++ +A+ ++ M+ + P T
Sbjct: 737 AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT 796
Query: 418 DELLQDWSYNKQFVERQIA 436
+L KQ + R ++
Sbjct: 797 YNILLHGFSKKQALLRYLS 815
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 165/400 (41%), Gaps = 49/400 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S + ++A + K ++ + W+L EM P++ T ILI C ++
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNV---GTFNILINGLCVEGNL 249
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCN------------ 164
+A N + F I + LL+ C RYK + M C
Sbjct: 250 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVF 309
Query: 165 ---------------------KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
K++ N ++N ++NG+ G A +V+ EMS+
Sbjct: 310 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKE-GKIGVAAQVFNEMSKFD 368
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + V+++ +I + + + LRL D M+ G+ + Y +++ L K + A
Sbjct: 369 LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAK 428
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-- 321
L++ M + + Y LI LCK LDEA Q M + G++P + TY + ++
Sbjct: 429 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 488
Query: 322 ----IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
I++ +E+ + M + G Y LI F + KV+ ++ NG+G
Sbjct: 489 CRVGNIKSAKEI---ICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHG 545
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D + L+ +L +GKL EA ++ M L+P T
Sbjct: 546 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 585
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 159/372 (42%), Gaps = 17/372 (4%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G ++ Y +I G + A++ D+M PS T +LL +
Sbjct: 570 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL---K 626
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKD 166
C G + A R + G D + LL+ C+ N+ +A L +
Sbjct: 627 GLC---KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLH 225
V P ++ +++ +L G C G + A ++ RG + + V ++C++ SKA +
Sbjct: 684 VLP-DSYTYSSLLTGLCRK-GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 741
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
F++M + G D +NA+I + ++ + A +M GV PN+ TYN L+
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGEEVFG--LLESMRKMGCQ 342
K + L + M++ GI P T+H+ L + ++G G LL M G
Sbjct: 802 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 861
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
T+ +LI K+S + F + N ++ G PDR +Y + + L E+
Sbjct: 862 ADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVV 921
Query: 403 YMEMKEKQLLPE 414
EM E ++P+
Sbjct: 922 LHEMLENGVIPK 933
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 3/229 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M G D +F+ +I+ YS++ + K L + M +G+ DR YN + + L K
Sbjct: 854 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
+++ ++ M E GV P Y +LI +C+ + A + DEM G
Sbjct: 914 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + ++ G E+ +L+ M +M PT T+ L+ +F R + K+ +
Sbjct: 974 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G D +Y LI + NG A + Y EM+ + L P T +L D
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1082
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
VFP + ++N I NG N + RE+ V EM + G+ + +I+ + ++
Sbjct: 895 VFP-DRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+L D+M+ +G +A++ L +DA+ ++ M + P + T+ +L+
Sbjct: 953 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1012
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGEE--VFGLLESMRKMGCQP 343
C+ K+ EA + M G+ + Y+ + + G+ F L E MR P
Sbjct: 1013 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCP 1072
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
TY +L+ S K+ ++ E G
Sbjct: 1073 NITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 144 LLSALCRYKNVQDA-------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
L++ +CR ++Q A E L F + +V + + ++ G + G + +A V
Sbjct: 940 LINGMCRVGDIQGAFKLKDEMEALGFGSHEV------AESAMVRGLLHC-GKTEDAMLVL 992
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M + + + +F+ ++ + + + + L+L M+ G++ D YN +I +
Sbjct: 993 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 1052
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
A L + M + + PN+ TY L+ + A L + + ++ +RG+
Sbjct: 1053 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 43/374 (11%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
E A F W Q Y Y MI + + + D A L EM+ P +
Sbjct: 134 EHAVYVFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNS 193
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK 165
L INA +++A+ I D +L A
Sbjct: 194 L----------------INAHARAGLWRWAINIMD--DMLRA------------------ 217
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + ++N ++N C G+ ++A + +M + G+ D+V+ + ++S +
Sbjct: 218 -AIPPSRATYNNVVNA-CGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYT 275
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV--APNVVTYNS 283
K F+ MK I D N VIH L K DA+ L+ SM EK V +P+VVTY S
Sbjct: 276 KATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTS 335
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMG 340
+I +++ + FD M+ G+ P I +Y+A L + E FG+ + +++ G
Sbjct: 336 IIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNG 395
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P +Y L+ + R Q +V+NE+ +N P++ SY ALI A G +EA
Sbjct: 396 LRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAI 455
Query: 401 QYYMEMKEKQLLPE 414
EM++ + P+
Sbjct: 456 SLLHEMEKDGIPPD 469
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 156/342 (45%), Gaps = 12/342 (3%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAY--KRFKFAVG 137
++ A + M+G P T L I+I V G A++ + KR + +
Sbjct: 273 QYTKATGYFEMMKGANIAPDTFT---LNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPD 329
Query: 138 IEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
+ + ++ + V++ + + M + V P N S+N +L + + G EA +
Sbjct: 330 VVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKP-NIVSYNALLGAYASH-GMHTEAFGI 387
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ + Q G+ DVVS++ +++ Y ++ K +F++M++ + ++ YNA+I A
Sbjct: 388 FKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGS 447
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ K+AISL+ ME+ G+ P+VV+ ++L+ + R+ + + RGI I
Sbjct: 448 AGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVA 507
Query: 316 YHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y++ + + G E+ L +M P TY +LI + ++ K + ++
Sbjct: 508 YNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMV 567
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ + Y++LI + KL EA ++ MK P+
Sbjct: 568 DLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPD 609
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 141/354 (39%), Gaps = 8/354 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ+G Y T++ G+ + + A + +EMR P+ V+ L I Y +
Sbjct: 392 KQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNAL---IDAYGSA 448
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK-DVFPFNTKSF 175
AI+ + ++ + LL+A R + + ++ K N ++
Sbjct: 449 GMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAY 508
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N + + + G +A +++ M + D V+++ +IS K + L+ F+ M
Sbjct: 509 NSGIGSYLSF-GDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMV 567
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
+ I ++VY+++I + K + +A S +M+ G P+V+TY ++I+
Sbjct: 568 DLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWT 627
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEE---VFGLLESMRKMGCQPTNDTYIMLI 352
F EM I P + ++ + G + V L++ M Q Y +I
Sbjct: 628 SVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEII 687
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
S R + ++ + + L++ L GK E + + +M
Sbjct: 688 ASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKM 741
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 177/397 (44%), Gaps = 35/397 (8%)
Query: 47 AAFTFFLWAGKQSGYAHSTREYHTMIAIL---GKVRKFDT--------------AWALID 89
A FF W Q G+ H+ Y ++ IL G +R + A +++
Sbjct: 85 TALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLN 144
Query: 90 EMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLL 145
+ E S+ + L +++ R+ + + +N + + G+E F ++
Sbjct: 145 LLTHHEFSLSVTSYNRLFMVLSRFGLIDE----LNCLF---KDMLNDGVEPNLISFNTMV 197
Query: 146 SALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI--ILNGWCNIIGSSREAERVWMEMSQRG 203
+A C+ NV A+ FC F F SF ++ G+C I +A +V+ M Q G
Sbjct: 198 NAHCKIGNVVVAK-AYFCGLMKFGFCCDSFTYTSLILGYCKI-HELGDAYKVFEIMPQEG 255
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ VS++ +I + + + + L LF QMK G D Y ++ A + +A+
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-I 322
+ M E G+ PNV TY LI CK K+DE + ML++G+ ++ ++A +D
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375
Query: 323 IRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
+ G E+ +L+SM+ P + TY LI F R + + N++ EN P+
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+Y LIH L ++ A + + M + +P+ +T
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT 472
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 22/430 (5%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ + Y ++I K+ + A+ + + M + G L + + LI +C V +
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP--QEG-CLRNEVSYTNLIHGFCEVGKI 276
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFN 176
A+ F+ K + + L++A C ++ E L F + V N ++
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVG--KETEALKFFEEMVENGIEPNVYTYT 334
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++++ +C + G E + M ++G+ VV F+ +I Y K + + + D MK
Sbjct: 335 VLIDYFCKV-GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
+ + + YN +I + + + A++L+ M E ++PN+VTYN+LI LCKAR +D
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + M++ G P RT+ AF+D + + G E+ + ES+++ + Y LI
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID 513
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + +F + ++ + G P+ ++ L+ L GK+E+A M + P
Sbjct: 514 GYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKP 573
Query: 414 EPKT-----DELLQDWSYNK--QFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQP 466
T +E+L++ +++ F+++ I+S QP T I Q R L+
Sbjct: 574 TVHTYTILIEEILRESDFDRANMFLDQMISS--GCQPNVVTYTAFIKAYCRQGR-LLEAE 630
Query: 467 ETRRVVRHQG 476
E ++ +G
Sbjct: 631 EMVVKIKEEG 640
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 163/361 (45%), Gaps = 10/361 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G Y ++A +V K A +EM P++ T +LI +C V
Sbjct: 287 KEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT---VLIDYFCKV 343
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK--DVFPFNTKS 174
+ + + F L+ C+ ++DA ++ K V P N+++
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCP-NSRT 402
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N ++ G+C R A + +M + + ++V+++ +I KAR + RL M
Sbjct: 403 YNELICGFCRKKSMDR-AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G D++ + A I L K V+ A + +S++EK N Y +LI CKA K
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKF 521
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
+A F ML G P T++ LD +R E+ L++ M K +PT TY +L
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I++ R F +++ +G P+ +YTA I A G+L EA + +++KE+ +
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI 641
Query: 412 L 412
L
Sbjct: 642 L 642
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 170/423 (40%), Gaps = 73/423 (17%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G S ++ +I K + A ++D M+ + P+ +T LI +C
Sbjct: 358 EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN---SRTYNELICGFCRKK 414
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---EHLMFCNKDVFPFNTKS 174
+ RA+ K + + + L+ LC+ + V A HLM KD F + ++
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI--KDGFVPDQRT 472
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
F ++ C + G +A +V+ + ++ + ++ +I Y KA LF +M
Sbjct: 473 FCAFIDCLCKM-GKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G + +N ++ L K V+DA+SL+ M + P V TY LI+ + +
Sbjct: 532 LFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDF 591
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLD--------------IIRTGEE------------ 328
D A D+M+ G P + TY AF+ +++ EE
Sbjct: 592 DRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVL 651
Query: 329 ------------VFGLLESMRKMGCQPTNDTYIMLIKK--FSRWRQFG------------ 362
FG+L M GC+P+ TY +L+K F ++ + G
Sbjct: 652 VNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISV 711
Query: 363 ---NVFKV---------WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
N++K+ + ++ E G P+ ++Y+ LI L L A + + MKE
Sbjct: 712 DNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESG 771
Query: 411 LLP 413
+ P
Sbjct: 772 ISP 774
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 157/387 (40%), Gaps = 40/387 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K R D+AW L M P ++T I C + V +A F
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD---QRTFCAFIDCLCKMGKVEQAHQVFE 494
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF---CNKDVFPFNTKSFNIILNGWCN 184
+ K + L+ C+ + DA HL+F + FP N+ +FN++L+G
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDA-HLLFKRMLFEGCFP-NSITFNVLLDGL-R 551
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G +A + M + V +++ +I + + + DQM G + +
Sbjct: 552 KEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVV 611
Query: 245 VYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
Y A I A + GRL+ +A ++ ++E+G+ + Y+ L+ +LD A
Sbjct: 612 TYTAFIKAYCRQGRLL-EAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIR 670
Query: 304 MLQRGISPTIRTYHAFL---------------DIIRTG--------------EEVFGLLE 334
M G P+ +TY L D+ T E + L E
Sbjct: 671 MFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFE 730
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M + GC P +TY LIK + F+++N + E+G P + + +L+ + G
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLG 790
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
EEA + M E L ++ +LL
Sbjct: 791 MHEEALRLLDSMMEYNHLAHLESYKLL 817
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 142/366 (38%), Gaps = 38/366 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I K KF A L M P+ +T LL +R+ V D ++
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM- 566
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF---NTKSFNIILNGWCN 184
+F + + L+ + R + A MF ++ + N ++ + +C
Sbjct: 567 --GKFDAKPTVHTYTILIEEILRESDFDRAN--MFLDQMISSGCQPNVVTYTAFIKAYCR 622
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EAE + +++ + GI D + +++ Y L + +M G E R+
Sbjct: 623 Q-GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQ 681
Query: 245 VYNAVIHALAKGRLVKDAISL--------------------------MKSMEEKGVAPNV 278
Y+ ++ L + K+ + L + M E+G PNV
Sbjct: 682 TYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNV 741
Query: 279 VTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLES 335
TY+ LIK LCK L A + F+ M + GISP+ +++ L + G EE LL+S
Sbjct: 742 NTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDS 801
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGK 395
M + ++Y +L+ +++ + G D + L+ L G
Sbjct: 802 MMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGY 861
Query: 396 LEEAHQ 401
++E Q
Sbjct: 862 VDECSQ 867
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 52/332 (15%)
Query: 64 STREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA-------- 115
+ Y +I + + FD A +D+M P++VT I+ YC
Sbjct: 574 TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAF---IKAYCRQGRLLEAE 630
Query: 116 ----------------VHDV--------GRAINAFYAYKRFKFAVGIEDFQGLLSALCRY 151
++DV G+ +AF R F G E + S L +
Sbjct: 631 EMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRM-FDTGCEPSRQTYSILLK- 688
Query: 152 KNVQDAEHLMF--CNKDVFPFNTKSFNIILNGWCNI--IGSSREAERVWMEMSQRGICYD 207
HL+F NK+ + S NI ++ NI I ++ +M ++G +
Sbjct: 689 -------HLIFEKYNKEGMGLDLNSTNISVDNA-NIWKIADFEIITMLFEKMVEQGCVPN 740
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V ++S +I K +L RLF+ MK GI ++N+++ + K + ++A+ L+
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
SM E ++ +Y L+ L + ++A + F +L G + + LD ++R G
Sbjct: 801 SMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKG 860
Query: 327 --EEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+E L + M K GC+ +DT+ ML ++ +
Sbjct: 861 YVDECSQLRDIMEKTGCRLHSDTHTMLSQELN 892
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 9/354 (2%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLMFCNK 165
+L+R + ++ A N F + + F ++S +CR ++ AE H
Sbjct: 121 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 180
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P + ++ ++ G C + G +A V+ +M RG+ + V F+ +I + K +
Sbjct: 181 GVTP-DVYTYGALIQGLCRV-GRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+L L +M+ G+ D YNA+++ L + R +K A ++ M G+ P+ VTY +LI
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQ 342
CK +LD A + M+ G+ TY A + + + G +L M + G +
Sbjct: 299 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P N TY M+I F R ++ E+ G P +Y +++ G+++ A
Sbjct: 359 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 418
Query: 403 YMEMKEKQLLPEPKTDELLQDW--SYNKQFVERQIASLKAHQPQSGQNTRVISK 454
M + P+ T +L D + K ++ S K P G T ++ +
Sbjct: 419 LNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGE 472
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 5/289 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P K FN+++ + G A+ V+ EM RG+ VVSF+ +IS +A +L
Sbjct: 112 LPPEAKLFNVLMRDLVRL-GELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +M G+ D Y A+I L + ++DA + + M +G+ PN V + LI
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
CK + + EM +RG+ P TY+A ++ + R + G++ MR G +P
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI + + + ++ + G G D +YTALI L G+ +A +
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
EM E L P+ T ++ D K V+ + LK Q G+ V++
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ-NKGRKPGVVT 398
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G Y +I L +V + + A + ++M G P+ V ILI +C
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV---FTILIDAHCKKG 235
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
D + + + +++ LCR ++++ A ++ + +T ++
Sbjct: 236 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 295
Query: 177 IILNGWCNIIGSSREAERVWMEMSQ----RGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+++G+C E + ME+ Q G+ D V+++ +IS SKA R+
Sbjct: 296 TLIDGYCK-----EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G+E D Y VI A + VK + L+K M+ KG P VVTYN ++ CK
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD 321
++ A + M+ G+SP TY+ LD
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLD 439
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 14/240 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G Y+ ++ L + R +A ++ EMR P VT T LI YC
Sbjct: 248 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT---LIDGYCKE 304
Query: 117 HDVGRAINAFYAYKRFKFAVGIED--FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
++ A+ VG+++ + L+S L + DAE ++ + P NT
Sbjct: 305 EELDMAME--IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 362
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ ++++ +C G + R+ EM +G VV+++ I++ + K + L +
Sbjct: 363 -TYTMVIDAFCR-KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 420
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M +G+ D YN ++ K V D I +KS KG P++ Y S++ + K +
Sbjct: 421 AMINIGVSPDDITYNILLDGHCKHGKVTD-IEELKS--AKGTVPDLGVYTSIVGEIVKKK 477
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 14/361 (3%)
Query: 80 KFDTAWALIDEMR--GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVG 137
+ D A L D M GG P +V ILI+R C+ GR +A + +
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPCN---ILIKRLCSD---GRVSDAERVFAALGPSAT 218
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ + +++ CR ++DA L+ N FP +T +FN ++ C + G +A V+
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLI--NGMPFPPDTFTFNPLIRALC-VRGRIPDALAVFD 275
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M RG VV++S ++ K + + L D+M+ G E D YN +I+A+
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A++++ ++ G P+ VTY ++K LC + + E + EM +P T++
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395
Query: 318 AFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+ + + G + +++ M + GC TY ++ + + ++ + +
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
G PD +YT ++ L + E A + EM P+ T + K V+R
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 435 I 435
I
Sbjct: 516 I 516
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 10/369 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + S Y ++ K + A AL+DEMR P +VT +LI C DV
Sbjct: 281 GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN---VLINAMCNEGDV 337
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A+N + +L +LC + ++ E L+ + + P + +FN
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP-DEVTFNT 396
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
I+ C G A V MS+ G D+V++S I+ + + L ++K
Sbjct: 397 IVTSLCQ-QGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G + D Y V+ L + A LM M P+ VT+N+++ LC+ +D A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ ++M + G SP I TY+ +D + ++ LL ++ GC+P T+ L+K
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
++ + ++ + + PD ++ +I +L G L +A + M E +P
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635
Query: 415 PKTDELLQD 423
T ++ D
Sbjct: 636 SSTYSIVVD 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 20/340 (5%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+ EM P VT T+ + C V RAI I + +L
Sbjct: 378 LLAEMTSNNCAPDEVTFNTI---VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434
Query: 147 ALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
LC V DA L+ C D + T +L G C+ R AE + EM
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT-----VLKGLCSTEQWER-AEELMAEML 488
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
D V+F+ +++ + + + +R+ +QM G D YN +I L +
Sbjct: 489 CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
DA+ L+ ++ G P++VT+N+L+K LC + ++A Q M++ P T++ +
Sbjct: 549 DAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVI 608
Query: 321 DIIRTGEEVFGLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ + +E+++ M GC P + TY +++ + + ++ + ++ NG
Sbjct: 609 TSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT-NGT- 666
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD +Y +I L GK+EEA M L P+ T
Sbjct: 667 PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTT 706
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 24/361 (6%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G T Y T++ L +++ A L+ EM + P VT T+ + C
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTV---VASLCQK 509
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPF 170
V RAI + I + ++ LC + DA L+ C D+ F
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569
Query: 171 NTKSFNIILNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
NT +L G C G R +AE++ M + D ++F+ +I+ + L + +
Sbjct: 570 NT-----LLKGLC---GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
M G + Y+ V+ AL K + A+ L+ M P+++TYN++I L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNL 679
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTN 345
KA K++EA M+ G+ P TY + + R + +L ++ G P
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739
Query: 346 DTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYME 405
Y ++ F R R+ + + +G PD S+Y L+ AL G L+EA +
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLAS 799
Query: 406 M 406
+
Sbjct: 800 L 800
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 162/418 (38%), Gaps = 58/418 (13%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++T++ L + D A ++D M +VT ++L + DVGR +A
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD------GLCDVGRVDDAVE 447
Query: 128 AYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM---FCNKDVFPFNTKSFNIILNG 181
R K D + +L LC + + AE LM C+ P + +FN ++
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD--CPPDEVTFNTVVAS 505
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCII------SCYSKARNLHKVLR------ 229
C G A RV +MS+ G D+V+++CII SC A L L+
Sbjct: 506 LCQK-GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564
Query: 230 -----------------------LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLM 266
L M R D +N VI +L + L+ AI +
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624
Query: 267 KSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRT 325
K M E G PN TY+ ++ L KA K A + M +P + TY+ + ++ +
Sbjct: 625 KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKA 682
Query: 326 G--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G EE LL M G P TY L R ++ + + G PD + Y
Sbjct: 683 GKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFY 742
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE-LLQDWSYNKQFVE--RQIASL 438
++ + + + A + M +P+ T LL+ +Y E R +ASL
Sbjct: 743 NDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 37/359 (10%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G+ + I+ +++ D A EM+ P++ T L +++ +C
Sbjct: 138 KDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYT---LNMVMCAFCKW 194
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSF 175
+ +AI F + F+ I + L++ C + L + K+ + +F
Sbjct: 195 GKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTF 254
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++NG+C G EA +++ EM + + ++++ +I+ YS+ N RL D+M
Sbjct: 255 NTLINGFCRG-GKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 313
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R GI+ D YNA+I L K A L+K ++ + + PN T+++LI C
Sbjct: 314 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC------ 367
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + E F L +SM + GC P T+ MLI F
Sbjct: 368 --------------------------VRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 401
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
+ F +V E+SE PD + + L L+L+GK E A + EM+ K L+PE
Sbjct: 402 CKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 460
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 3/229 (1%)
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ EM + I +V + + ++ + K L K + +F +M+ MG YN +I
Sbjct: 169 YREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCN 228
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
L+ + L ME+ GV P+ VT+N+LI C+ KL EA + F EM + P T
Sbjct: 229 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTIT 288
Query: 316 YHAFLD-IIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEIS 372
Y+ ++ + G G L + M + G + TY LI + + E+
Sbjct: 289 YNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELD 348
Query: 373 ENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
P+ S+++ALI + E A Q Y M P T ++L
Sbjct: 349 RENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKML 397
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA---LAKGRLVKDAISLMK 267
F + Y++ + L + +F QMK G + NA I A L +G + A++ +
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDI---ALTFYR 170
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M+ ++PNV T N ++ CK KL++A + F +M G SPTI +Y+ + G
Sbjct: 171 EMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLI----AGY 226
Query: 328 EVFGLLES-------MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDR 380
GLL S M K G +P + T+ LI F R + K+++E+ N P+
Sbjct: 227 CNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 286
Query: 381 SSYTALIHALFLNGKLEEAHQYYMEM 406
+Y LI+ G E + + EM
Sbjct: 287 ITYNTLINGYSQVGNSEMGGRLHDEM 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 241 CDRK--VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
CD V++++ A+ + +++AI + M++ G P V + N+ I ++ D A
Sbjct: 107 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 166
Query: 299 QAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ EM + ISP + T + + + G E+ + + M MG PT +Y LI +
Sbjct: 167 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGY 226
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ K+ + +NG PD ++ LI+ GKL EA++ + EMK ++P
Sbjct: 227 CNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 286
Query: 416 KT-DELLQDWS 425
T + L+ +S
Sbjct: 287 ITYNTLINGYS 297
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 161/383 (42%), Gaps = 12/383 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + + Y M+ L K+ +F A + M VT ILI C
Sbjct: 256 RDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYG---ILIHGLCRS 312
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF--NTKS 174
DV A + + + + + L+ C + E F + F +
Sbjct: 313 GDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG--RTGEAWKFWDSTGFSGIRQITT 370
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQ 233
+NI+ G + G EA + ++ C D V+F +I + ++ + +
Sbjct: 371 YNIMTKGLLDS-GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ G E D Y+++I+ K DA + K+M + G PN YN+LI C+ K
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIM 350
+++A + + EM G PTI TY+ +D + E E L + M + G +P TY
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI+ R ++ ++W+EI + G D + LIH L GK++EA Y+EMKEK
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609
Query: 411 LLPEPKTDELLQDWSYNKQFVER 433
P T L D Y +++
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDK 632
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 133/350 (38%), Gaps = 52/350 (14%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM------- 161
LI+ +C V G A F+ F I + + L V +A L+
Sbjct: 340 LIKGFCEVGRTGEAWK-FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDA 398
Query: 162 FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKA 221
C+ D F T + NG+ N A + + G DV S+S +I+ + K
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYAN------RAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Query: 222 RNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTY 281
H ++ M + G + + VYNA+I+ + + DAI + M G P ++TY
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-----------------DIIR 324
N+LI LCKA K EA EML+RG P IRTY + + +I+
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572
Query: 325 TG---------------------EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G +E F + M++ C P TY L+ F
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+W I +NG PD +Y I L + E E+ ++P
Sbjct: 633 AASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMP 682
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 179/451 (39%), Gaps = 83/451 (18%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK-Q 104
+AA F G R ++T++ + R++ A A + G G + Q
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 105 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--- 161
T I++R CA DV RA++ F + +R A + L+S L ++ + +A L+
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219
Query: 162 ---FCNKDVFPFNT-------------------------------KSFNIILNGWCNIIG 187
D +N ++ ++L+G C +G
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCK-LG 278
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+EA VW M D V++ +I ++ ++ R++ M + G+ D VYN
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338
Query: 248 AVIHA------------------------------LAKGRL----VKDAISLMKSME-EK 272
++I + KG L V +A L+K +E +
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDA 398
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII----RT--G 326
+P+ VT+ +LI LC+ + A + ++ G + +Y + ++ RT
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EV+ ++M K GC+P + Y LI F R + + K++ E++ NG P +Y L
Sbjct: 459 NEVY---KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL 515
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
I L K +EA EM E+ P+ +T
Sbjct: 516 IDGLCKAEKYQEASSLTKEMLERGFKPDIRT 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 141 FQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
+ L++ CR + DA + C + +NT +++G C +EA
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT-----LIDGLCKA-EKYQEASS 530
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALA 254
+ EM +RG D+ +++ +I + + + LR++D++ G++ D V+N +IH L
Sbjct: 531 LTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLC 590
Query: 255 KGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 314
V +A + M+EK +PN+VTYN+L+ + +D+A + +L G+ P I
Sbjct: 591 SAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIV 650
Query: 315 TYH----AFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
TY+ RT E V LL + G PT T+ +L++ ++
Sbjct: 651 TYNTRIKGLCSCNRTPEGVL-LLNEVLATGIMPTVITWSILVRAVIKY 697
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 5/234 (2%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G ++ Y+ +I +V K + A + EM P+++T TL I C
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL---IDGLCKAE 523
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
A + F I + L+ LCR K V A + D + N
Sbjct: 524 KYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHN 583
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
I+++G C+ G EA +++EM ++ ++V+++ ++ + + ++ K L+ +
Sbjct: 584 ILIHGLCSA-GKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCK 290
G++ D YN I L + + L+ + G+ P V+T++ L++ + K
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 15/325 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
I+I C + A N F + I + L+ C D L+ +
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ P N +F+++++ + G REAE + EM RGI D ++++ +I + K +L
Sbjct: 426 KINP-NVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
K ++ D M G + + + +N +I+ K + D + L + M +GV + VTYN+LI
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQ 342
+ C+ KL+ A++ F EM+ R + P I TY LD + G E+ + E + K +
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 603
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
Y ++I + + + ++ + G P +Y +I L G L EA
Sbjct: 604 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 663
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYN 427
+ +M+E P+ W+YN
Sbjct: 664 FRKMEEDGHAPD--------GWTYN 680
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 163/370 (44%), Gaps = 12/370 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G AH+ MI + RK A++ + ++ P+ +T TL I C V
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL---INGLCLEGRV 272
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV---FPFNTKSFN 176
A+ + L++ LC + ++AE ++ +K V N ++
Sbjct: 273 SEALELVDRMVEMGHKPDLITINTLVNGLCL--SGKEAEAMLLIDKMVEYGCQPNAVTYG 330
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+LN C G + A + +M +R I D V +S II K +L LF++M+
Sbjct: 331 PVLNVMCKS-GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 389
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
GI + YN +I D L++ M ++ + PNVVT++ LI K KL E
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIK 353
A + EM+ RGI+P TY + +D ++ +++ M GC P T+ +LI
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509
Query: 354 KFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ + + + +++ ++S G D +Y LI GKL A + + EM +++ P
Sbjct: 510 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 569
Query: 414 EPKTDELLQD 423
T ++L D
Sbjct: 570 NIVTYKILLD 579
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 46/329 (13%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A T Y ++I K D A ++D M P++ +T ILI YC + +
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI---RTFNILINGYCKANRI 517
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+ F +G+++ +T ++N ++
Sbjct: 518 DDGLELFRKMS----------LRGVVA------------------------DTVTYNTLI 543
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G+C + G A+ ++ EM R + ++V++ ++ K L +F+++++ +
Sbjct: 544 QGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
E D +YN +IH + V DA L S+ KGV P V TYN +I LCK L EA
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662
Query: 300 AFDEMLQRGISPTIRTYHAFLDI-IRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFS 356
F +M + G +P TY+ + + G+ L+E +++ G T M+I S
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 722
Query: 357 RWRQFGNVFKVWNEISENG---NGPDRSS 382
+ N F ++ S++ N P++ S
Sbjct: 723 DDK--ANYFSKYHNCSKSTSFWNQPEKPS 749
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M +GI +++ + S +I+C+ + R L ++ ++G E + ++ +I+ L
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 270
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V +A+ L+ M E G P+++T N+L+ LC + K EA D+M++ G P TY
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330
Query: 318 AFLDII-RTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
L+++ ++G+ LL M + + Y ++I + N F ++NE+
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQ 434
G + +Y LI G+ ++ + +M ++++ P T +L D S+ K+ R+
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID-SFVKEGKLRE 449
Query: 435 IASLKAHQPQSGQNTRVISKKS 456
L G I+ S
Sbjct: 450 AEELHKEMIHRGIAPDTITYTS 471
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+ FS + S +K + VL L QM+ GI + + +I+ + R + A S M
Sbjct: 186 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 245
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG 326
+ + G PN +T+++LI LC ++ EA + D M++ G P + T + ++ + +G
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305
Query: 327 EEVFGLL--ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+E +L + M + GCQP TY ++ + Q ++ ++ E D Y+
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQL 411
+I L +G L+ A + EM+ K +
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGI 392
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
DAI L + M P V+ ++ L + K ++ D +M +GI+ + T +
Sbjct: 169 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228
Query: 321 DII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
+ R F + + K+G +P T+ LI + ++ + + E G+
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
PD + L++ L L+GK EA +M E P T
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 328
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 177/385 (45%), Gaps = 33/385 (8%)
Query: 44 DWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTK 103
D + A +F W + + H+ Y +++ +L + P V K
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLC-----------------SQEIPYEVPK 81
Query: 104 QTLLIL-----IRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE 158
T+L++ +R V D R + +++ K+ + + + LLS+L R+ V++ +
Sbjct: 82 ITILMIKSCNSVRDALFVVDFCRTMRKGDSFE-IKYKLTPKCYNNLLSSLARFGLVEEMK 140
Query: 159 HL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L M +D+ + +FN ++NG+C + G EA++ + Q G D +++ I
Sbjct: 141 RLYTEML--EDLVSPDIYTFNTLVNGYCKL-GYVVEAKQYVTWLIQAGCDPDYFTYTSFI 197
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
+ + + + + ++F +M + G + Y +I+ L + + + +A+SL+ M++
Sbjct: 198 TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 257
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGL 332
PNV TY LI LC + + EA F +M + GI P Y + +G+ E GL
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
LE M + G P TY LIK F + + + +++ E PD +Y LI
Sbjct: 318 LEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT 417
+G L+ A++ M+E L+P +T
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
K YN ++ +LA+ LV++ L M E V+P++ T+N+L+ CK + EA+Q
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 304 MLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
++Q G C P TY I R ++
Sbjct: 181 LIQAG--------------------------------CDPDYFTYTSFITGHCRRKEVDA 208
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
FKV+ E+++NG + SYT LI+ LF K++EA ++MK+ P +T +L D
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 166/338 (49%), Gaps = 21/338 (6%)
Query: 17 EMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAIL 75
E+ K + G+ + + L + ++ + ++ L+A K+ G Y+ ++ +
Sbjct: 866 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 925
Query: 76 GKVRKFDTAWALIDEMRGGETGPSLVTKQTL---LILIRRYCAVHDVGRAINAFYAYKRF 132
GK + + + +EM + VT T+ L+ RR + +AI+ +Y
Sbjct: 926 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR------LEQAIDLYYNLMSQ 979
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWCNIIGS 188
F+ + LL L + ++DAE+L ++ + K+ +NI+LNG I G+
Sbjct: 980 GFSPTPCTYGPLLDGLLKAGRIEDAENLF---NEMLEYGCKANCTIYNILLNGH-RIAGN 1035
Query: 189 SREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNA 248
+ + ++ +M +GI D+ S++ II KA L+ L F Q+ MG+E D YN
Sbjct: 1036 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1095
Query: 249 VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG 308
+I L K + +++A+SL M++KG+ PN+ TYNSLI L KA K EA + ++E+L +G
Sbjct: 1096 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1155
Query: 309 ISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQP 343
P + TY+A + + + + + M GC P
Sbjct: 1156 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1193
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 135 AVGIEDF--QGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILNGWC--NIIGSS 189
+ ++DF L+ LC+ K +A L+ K T +N ++ G N+I
Sbjct: 840 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDI- 898
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
AE ++ EM + G D +++ ++ K+ + ++L++ ++M R G E YN +
Sbjct: 899 --AEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTI 956
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I L K R ++ AI L ++ +G +P TY L+ L KA ++++A F+EML+ G
Sbjct: 957 ISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGC 1016
Query: 310 SPTIRTYHAFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
Y+ L+ I E+V L + M G P +Y ++I + Q +
Sbjct: 1017 KANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLT 1076
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ ++ E G PD +Y LI L + +LEEA + EM++K ++P
Sbjct: 1077 YFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 1123
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 41/361 (11%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + Y I +LG+ ++FD A+ ++ +M P ++T +LI+ C D
Sbjct: 350 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT---VLIQVLC---DA 403
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
GR +A + + K + D ++ L ++ + D++ +M
Sbjct: 404 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM------------------ 445
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
+W M G +VV+++ +I + + + L +FD+MK+ GI
Sbjct: 446 --------------EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 491
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
++ YN++I K DA+ L K M+ G PN T+ I K+ + +A Q
Sbjct: 492 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 551
Query: 300 AFDEMLQRGISPTIRTYHAFL-DIIRTGEEVFG--LLESMRKMGCQPTNDTYIMLIKKFS 356
++ M +GI P + +A L + ++G + ++ MG P TY M+IK S
Sbjct: 552 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 611
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
+ +F K++ ++ EN PD + +LI L+ G+ +EA + + ++KE L P
Sbjct: 612 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 671
Query: 417 T 417
T
Sbjct: 672 T 672
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 18/277 (6%)
Query: 157 AEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
AE + + N +F I G + G R A M + GI + +++ ++
Sbjct: 235 AEVFDVMQRQIVKANVGTFAAIFGGL-GVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVY 293
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
K+ + L ++ M G+ + Y+ ++ A K R V+ + L++ ME GV P
Sbjct: 294 FLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 353
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI------IRTGEEVF 330
NV +Y I+ L +A++ DEA + +M G P + T+ + + I ++VF
Sbjct: 354 NVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 413
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M+K +P TYI L+ KF +V ++WN + +G + +YTA+I AL
Sbjct: 414 ---WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 470
Query: 391 FLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN 427
G++ EA + + EMK+K ++PE +SYN
Sbjct: 471 CQVGRVFEALEMFDEMKQKGIVPE--------QYSYN 499
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 10/315 (3%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF 168
+I C V V A+ F K+ + L+S + DA L F + D+
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL-FKHMDIH 524
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERV---WMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ +L + N G S E+ + + M +GI DVV+ + ++ +K+ L
Sbjct: 525 GPKPNGYTHVL--FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 582
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
R+F ++K MG+ D Y +I +K +A+ + M E P+V+ NSLI
Sbjct: 583 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 642
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
L KA + DEA + F ++ + + PT TY+ L + R G +EV LLE M
Sbjct: 643 DTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYP 702
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P TY ++ + + + ++ G PD SSY +I+ L + EA
Sbjct: 703 PNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSI 762
Query: 403 YMEMKEKQLLPEPKT 417
+ +MK K L+P+ T
Sbjct: 763 FCQMK-KVLIPDYAT 776
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
LF +MK +G D YN ++ A+ K +++ + + + M KG VTYN++I L
Sbjct: 902 LFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLV 961
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTND 346
K+R+L++A + ++ +G SPT TY LD +++ G E+ L M + GC+
Sbjct: 962 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 1021
Query: 347 TYIMLIKKFSRWRQFGNVFKV---WNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
Y +L+ R GN KV + ++ + G PD SYT +I L G+L + Y+
Sbjct: 1022 IYNILLNGH---RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1078
Query: 404 MEMKEKQLLPEPKTDELLQD 423
++ E L P+ T LL D
Sbjct: 1079 RQLLEMGLEPDLITYNLLID 1098
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 157/387 (40%), Gaps = 62/387 (16%)
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFK-FAVGIED--FQGLLSALCRYKNVQDAEHL-- 160
L LI+ C +A+ A K+FK F V ++ + L+ L + AE L
Sbjct: 848 LCPLIKHLCKQK---KALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFA 904
Query: 161 ----MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSC 213
+ C D F ++N++L+ +G S E +V EM ++G V+++
Sbjct: 905 EMKELGCGPDEF-----TYNLLLDA----MGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 955
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE-- 271
IIS K+R L + + L+ + G Y ++ L K ++DA +L M E
Sbjct: 956 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 1015
Query: 272 ---------------------------------KGVAPNVVTYNSLIKPLCKARKLDEAR 298
+G+ P++ +Y +I LCKA +L++
Sbjct: 1016 CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGL 1075
Query: 299 QAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F ++L+ G+ P + TY+ +D + EE L M+K G P TY LI
Sbjct: 1076 TYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHL 1135
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + K++ E+ G P+ +Y ALI ++G + A+ Y M LP
Sbjct: 1136 GKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1195
Query: 416 KTDELLQDWSYNKQFVERQIASLKAHQ 442
TD V +QI S +++
Sbjct: 1196 STDSSNCSSPEAVGTVRKQITSHRSYH 1222
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 155/368 (42%), Gaps = 26/368 (7%)
Query: 69 HTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYA 128
+++I L K + D AW + +++ P+ T TLL + R V +V + Y
Sbjct: 639 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY- 697
Query: 129 YKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGW 182
+ + + +L LC+ V DA +++ C D+ +NT + ++
Sbjct: 698 --HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 755
Query: 183 CNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLF-DQMKRMGIEC 241
N EA ++ +M ++ + D + I+ + K + + L + D + G +
Sbjct: 756 YN------EAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKT 808
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
DR ++++ + K ++ +I + + G+ + LIK LCK +K EA +
Sbjct: 809 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 868
Query: 302 DEMLQRGISPTIRTYHAFL------DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ G+S Y++ + ++I E GL M+++GC P TY +L+
Sbjct: 869 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAE---GLFAEMKELGCGPDEFTYNLLLDAM 925
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEP 415
+ + + KV E+ G +Y +I L + +LE+A Y + + P P
Sbjct: 926 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985
Query: 416 KTDELLQD 423
T L D
Sbjct: 986 CTYGPLLD 993
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 153 NVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+V AE L+ + FP + + + +L GWC G EA+ V M + DVV+F+
Sbjct: 170 HVVTAEQLVEEPQTRFPLSLRHYTALLYGWCRQ-GKLDEAKHVLARMKAADVALDVVAFN 228
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEE 271
+++ + L QM++ G + Y +I L A+GR V +A+ + M
Sbjct: 229 TLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGR-VDEAMRVFVEMRR 287
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL---DIIRTGEE 328
KG AP+ VTY +L+ CKA K+ + + D + + G+ YH F + EE
Sbjct: 288 KGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEE 347
Query: 329 VFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIH 388
L+E MR+ C P Y ++I+ R + +WNE+ G P ++ +++
Sbjct: 348 CLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVN 407
Query: 389 ALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
L G L EA Y+ +M + L P+
Sbjct: 408 GLVGQGLLVEACSYFKDMVGRGLFVAPQ 435
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 44/346 (12%)
Query: 133 KFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK------DVFPFNTKSFNIILNG----- 181
+F + + + LL CR + +A+H++ K DV FNT + +G
Sbjct: 184 RFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDA 243
Query: 182 ------------------WCNII------GSSREAERVWMEMSQRGICYDVVSFSCIISC 217
+ +I G EA RV++EM ++G D V++ ++S
Sbjct: 244 FELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVST 303
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ KA + + D + R G+ D VY+ A K +++ + LM+ M E P+
Sbjct: 304 FCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPD 363
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLE 334
+ YN +I+ C+ + +A ++EM G+SP + T+ ++ ++ G E +
Sbjct: 364 LKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFK 423
Query: 335 SM--RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
M R + P L+ R + VW I+ G + S++T IHAL+
Sbjct: 424 DMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCELNVSAWTIWIHALYA 483
Query: 393 NGKLEEAHQYYMEMKEKQLLPEPKT-DELLQDWSYNKQFVERQIAS 437
++EA Y ++M E ++P+P T +L++ K+ RQIA+
Sbjct: 484 KKHVKEACLYCLDMLEAGVMPQPDTFAKLMKGL---KKLYNRQIAA 526
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 7/263 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q G + Y T+I LG + D A + EMR P VT T L+ +C
Sbjct: 251 EQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGT---LVSTFCKA 307
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSF 175
+ + A R V + G A + + +++ LM ++ P + K +
Sbjct: 308 GKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIY 367
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N+++ C +G +++A +W EM G+ V +F+ +++ L + F M
Sbjct: 368 NVVIRLACR-LGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMV 426
Query: 236 RMG--IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
G + V +++AL + ++ A + + + KG NV + I L +
Sbjct: 427 GRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCELNVSAWTIWIHALYAKKH 486
Query: 294 LDEARQAFDEMLQRGISPTIRTY 316
+ EA +ML+ G+ P T+
Sbjct: 487 VKEACLYCLDMLEAGVMPQPDTF 509
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 153/353 (43%), Gaps = 16/353 (4%)
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
++ G+VR +A AL+ RG + G + + L+ YC DV A F R
Sbjct: 12 LSAAGEVR---SALALL--ARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPR 66
Query: 132 FKFAVGIEDFQGLLSALC----RYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
F L+ R K + E + + P N ++NI++ WC G
Sbjct: 67 LGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGG--IEP-NLYTYNILVGEWCRT-G 122
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
A ++ EM +GI +VVS++ +I+ + R + +L + M+R GI +N
Sbjct: 123 EFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFN 182
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++ K + +A+ M G P+ VTYN+LI C+AR + A +AF +M +R
Sbjct: 183 LLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKER 242
Query: 308 GISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
G++PT TY +D ++ F + M K G + TY +L+ +
Sbjct: 243 GLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDA 302
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K++ I E G Y LI+ G +A + MEM++K +P +
Sbjct: 303 RKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSAS 355
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 207 DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKGRLVKDAISL 265
DV + + ++ Y ++ ++ + R+FD M R+G+ + + A+IH GR K ++L
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREK-GLAL 95
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
+ M G+ PN+ TYN L+ C+ + + AR F+EM +GI+ + +Y+ + +
Sbjct: 96 FEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR 155
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
R ++ LLE MR+ G +P+ T+ +L+ + + + N N++ G P +
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
Y ALI + A++ + +MKE+ L P T +L D
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILID 256
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 41/314 (13%)
Query: 82 DTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
+ AL ++MR G P+L T IL+ +C + RA F + +
Sbjct: 90 EKGLALFEKMRIGGIEPNLYTYN---ILVGEWCRTGEFERARLLFEEMPAKGITRNVVSY 146
Query: 142 QGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCN---------------- 184
L++ LCRY+ ++DA L+ ++ + +FN++++G+
Sbjct: 147 NTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM 206
Query: 185 -------------IIGSSR-----EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
I G R A R + +M +RG+ V+++ +I +++ ++ K
Sbjct: 207 AGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDK 266
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+F M++ G+E D + Y ++HAL +KDA L +S+ EKG+ V Y+ LI
Sbjct: 267 AFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIY 326
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQP 343
+ +A + EM ++G P +Y + I+ E L++ M + G Q
Sbjct: 327 GYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQT 386
Query: 344 TNDTYIMLIKKFSR 357
+ +L+ +R
Sbjct: 387 SESVRQVLLNAKAR 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 38/256 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G S ++ ++ GK K A ++MR PS VT LI +C
Sbjct: 170 RREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA---LIAGFCRA 226
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
D+ RA AF K A + L+ A R +N D MF
Sbjct: 227 RDMIRANRAFSDMKERGLAPTKVTYTILIDAFAR-ENDMDKAFEMFAG------------ 273
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
M + G+ DV ++ ++ N+ +LF +
Sbjct: 274 ----------------------MEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGE 311
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ +Y+ +I+ + A+ L+ M +KG PN +Y I+ LC K E
Sbjct: 312 KGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSE 371
Query: 297 ARQAFDEMLQRGISPT 312
A D+M++ G+ +
Sbjct: 372 AEALIDDMVRAGVQTS 387
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 259 VKDAISLMKSMEEKG-VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
V+ A++L+ + G +V +L+ C++ + EA++ FD M + G++P T+
Sbjct: 18 VRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFT 77
Query: 318 AFLD---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
A + I E+ L E MR G +P TY +L+ ++ R +F ++ E+
Sbjct: 78 ALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAK 137
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNK 428
G + SY LI L K+++A Q M+ + + P T LL D Y K
Sbjct: 138 GITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD-GYGK 190
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 11/334 (3%)
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
G +LVT L I C ++ A+ F + + L+S C+ V++
Sbjct: 488 GANLVTTNAL---IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 544
Query: 157 AEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCI 214
L + + P +T ++N++++G C I G EA +W E R + +V ++ +
Sbjct: 545 GFKLRGEMVKQGIEP-DTFTYNLLIHGMCRI-GKLDEAVNLWNECKSRDLVPNVYTYGVM 602
Query: 215 ISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGV 274
I Y KA + + +LF ++ +E + VYN +I A + +A L M KG+
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFG 331
P TY+SLI +C ++++A+ DEM + G+ P + Y A + + G ++V
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
+L+ M P TY ++I +S+ K+ +E+ G PD +Y L +
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Query: 392 LNGKLEEAHQYYMEMKEKQL-LPEPKTDELLQDW 424
GK+EE + M ++ L L E L+ W
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 190 REAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAV 249
R A V+ ++ +G+ V + + ++S KA L K +F+ M R G+ D +++
Sbjct: 194 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTA 252
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
I+A KG V+DAI L ME+ GV+PNVVTYN+LI LCK LDEA + ++M++ G+
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 310 SPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
+ T+ TY ++ + E E +L+ + G P Y LI + + G+ +
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDW 424
+ ++ G P+ + ++I G++E+A EM + P + W
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 430
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 156/379 (41%), Gaps = 11/379 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + + Y+ +I L K D A+ ++M +L+T +LI +
Sbjct: 276 GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYS---VLINGLMKLEKF 332
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A + F + L+ C+ N+ DA + +K + P N+ + N
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINP-NSVTLNS 391
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
I+ G+C I G +AE + EM RG + +F+ II LR +M
Sbjct: 392 IIQGFCKI-GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
+ + + ++ L K DA+ L + EKG N+VT N+LI LCK + EA
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510
Query: 298 RQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ +ML+RG TY+ + + G EE F L M K G +P TY +LI
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL-LP 413
R + +WNE P+ +Y +I K+EE + + E+ + L L
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 414 EPKTDELLQDWSYNKQFVE 432
+ L++ + N VE
Sbjct: 631 SVVYNTLIRAYCRNGNTVE 649
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 172/432 (39%), Gaps = 72/432 (16%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAIL---------------------------GKV 78
+ A FF +A G+ + R Y ++ L K
Sbjct: 93 KTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKN 152
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCA-VHDVG--RAINAFYAYKRFKFA 135
R + A A+ D GE+G V + +LI YC +VG AI F
Sbjct: 153 RHIEIASAMADLNEVGESG---VAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF 209
Query: 136 VGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERV 195
++ LLS+L + ++ + + + + F+ +N +C G +A ++
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKG-GKVEDAIQL 268
Query: 196 WMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK 255
+ +M + G+ +VV+++ +I K NL + R ++M + G+ Y+ +I+ L K
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+A S++K EKG PN V YN+LI CK L +A + +M+ +GI+P T
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388
Query: 316 YHAFLD-IIRTG--EEVFGLLESMRKMG---------------C---------------- 341
++ + + G E+ +LE M G C
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448
Query: 342 ----QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+P + L+ + + + ++W + E G G + + ALIH L G ++
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 508
Query: 398 EAHQYYMEMKEK 409
EA + +M E+
Sbjct: 509 EAVRLLKKMLER 520
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 20 NKIEECGIKVSSELVSEVL---SWVRNDWEAAF--------TFFLWAGKQS-GYAHSTRE 67
+KIEE G K+ +EL+++ L S V N A+ F L +S G +T
Sbjct: 610 DKIEE-GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 668
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y ++I + + + + A LIDEMR P++V LI YC + + + +N
Sbjct: 669 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA---LIGGYCKLGQMDKVVNVLQ 725
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNI 185
+ + ++ + +++ A L+ K + P +T ++N++ NG+C
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVP-DTVTYNVLTNGFCK- 783
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCII 215
G E ++ MSQ G+ D ++++ ++
Sbjct: 784 EGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 18/385 (4%)
Query: 29 VSSELVSEVLSWV---RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
+S++ V VL + ++ A FF ++ + S + S+ + + IL ++R F+ AW
Sbjct: 90 LSTDFVENVLGRLFAAHSNGLKALEFFRFSLRHSHFNPSSFAFEMTLHILARMRYFEKAW 149
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKF---AVGIEDFQ 142
L+ E+ G++ PSL+T +++ I++ + + AF ++ F G E+F
Sbjct: 150 ELMMEI--GKSHPSLLTLKSMGIMLSKIAKFQSYEDTLEAFKRMEKTVFVGKTFGTEEFN 207
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSRE---AERVWMEM 199
LL A C + V++A + D F NTK+ NI+L G+ +R+ E + E+
Sbjct: 208 VLLQAFCSQREVKEARSVFQKMHDQFNPNTKTMNILLLGF----KKARDITAMELFYHEI 263
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
+RG ++++ I Y K LR+F++M++ + +IH R +
Sbjct: 264 VRRGFKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNI 323
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA- 318
A L + ++ + P+ YN+LI L K + ++ A + DEM ++ I TYH
Sbjct: 324 HKARHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTI 383
Query: 319 FLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
F +++ E V L M P T +ML+K F + W + + G
Sbjct: 384 FFGLMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGY 443
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQ 401
P + L+ L G+L EA++
Sbjct: 444 CPHGHALDLLVTGLCSRGRLLEAYE 468
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ ++ +GK + + + EM + VT T++ + + +++ A++ +Y
Sbjct: 814 YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYE---AMDLYY 870
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKS----FNIILNGWC 183
F+ + LL L + ++DAE L ++ + K +NI+LNG+
Sbjct: 871 KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLF---DEMLDYGCKPNRAIYNILLNGY- 926
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
+ G++ + ++ M +GI D+ S++ +I A L+ L F Q+ +G+E D
Sbjct: 927 RLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDL 986
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
YN +IH L + +++A+SL ME+ G+APN+ TYNSLI L K K EA + ++E
Sbjct: 987 ITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEE 1046
Query: 304 MLQRGISPTIRTYHAFL---DIIRTGEEVFGLLESMRKMGCQPTNDTYIML 351
+L+ G P + TY+A + + + + F M GC P + TY+ L
Sbjct: 1047 LLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 191 EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR-LFDQMKRMGIECDRKVYNAV 249
EA + + G+ S++ +I C NL V LF +MKR+G + D YN +
Sbjct: 759 EAHELVKKFESLGVSLKTGSYNALI-CGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817
Query: 250 IHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
+ A+ K ++D + + K M KG VTYN++I L K++ L EA + +++ G
Sbjct: 818 LDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGF 877
Query: 310 SPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
SPT TY LD +++ G E+ L + M GC+P Y +L+ + V +
Sbjct: 878 SPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCE 937
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
++ + + G PD SYT LI AL G+L ++ Y+ ++ E L P+ T LL
Sbjct: 938 LFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLL 992
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 13/285 (4%)
Query: 138 IEDF--QGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC--NIIGSSRE 191
++DF L+ LC+ K +A L+ F + V T S+N ++ G N+I
Sbjct: 739 LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGV-SLKTGSYNALICGLVDENLIDV--- 794
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE ++ EM + G D +++ I+ K+ + +L++ +M G E YN +I
Sbjct: 795 AEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIIS 854
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L K +++ +A+ L + +G +P TY L+ L K K+++A FDEML G P
Sbjct: 855 GLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKP 914
Query: 312 TIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
Y+ L+ R E+V L ++M G P +Y +LI + + +
Sbjct: 915 NRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYF 974
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+++E G PD +Y LIH L +G+LEEA + +M++ + P
Sbjct: 975 RQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAP 1019
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 152/336 (45%), Gaps = 8/336 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G + T Y+ +I L D A L EM+ P T +L + + + D+
Sbjct: 771 GVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDM 830
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNII 178
+ + V + ++S L + K + +A L + + F ++ +
Sbjct: 831 LKVQKEMHCKGYESTYV---TYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPL 887
Query: 179 LNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMG 238
L+G G +AE ++ EM G + ++ +++ Y A N KV LF M G
Sbjct: 888 LDGLLKD-GKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG 946
Query: 239 IECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEAR 298
I D K Y +I AL + D++S + + E G+ P+++TYN LI L ++ +L+EA
Sbjct: 947 INPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAV 1006
Query: 299 QAFDEMLQRGISPTIRTYHAF-LDIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKF 355
F++M + GI+P + TY++ L + + G+ E + E + K G +P TY LI +
Sbjct: 1007 SLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY 1066
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
S N F + ++ G P+ S+Y L + L
Sbjct: 1067 SVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQLL 1102
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 173/420 (41%), Gaps = 50/420 (11%)
Query: 37 VLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
+L++ + D E + L + G + Y I +LG+ +F+ A+ ++ +M
Sbjct: 224 MLAFGKRDVETV-VWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGC 282
Query: 97 GPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQD 156
P +VT +LI+ C D GR +A + + K + D ++ L + + D
Sbjct: 283 KPDVVTNT---VLIQILC---DAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGD 336
Query: 157 AEHLM----FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
+ ++ D + N ++ +++ C + G EA V+ +M Q+GI S++
Sbjct: 337 SRSVIEIWNAMKADGYNDNVVAYTAVVDALCQV-GRVDEASDVFDQMKQKGIEPQQYSYN 395
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+IS + KA L+ L LF+ M G + Y I+ K AI + M+ K
Sbjct: 396 SLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSK 455
Query: 273 GVAPNVV-----------------------------------TYNSLIKPLCKARKLDEA 297
G+ P+VV TY +IK KA DEA
Sbjct: 456 GIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEA 515
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRT---GEEVFGLLESMRKMGCQPTNDTYIMLIKK 354
+ F EM++ P + ++ +D + G E + + +++M PT+ TY L+
Sbjct: 516 MKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAG 575
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
R + V + E++ N P+ +Y ++ L NG++ A M K +P+
Sbjct: 576 LGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPD 635
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 160/382 (41%), Gaps = 35/382 (9%)
Query: 53 LW-AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
+W A K GY + Y ++ L +V + D A + D+M+ P + +L I
Sbjct: 343 IWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL---IS 399
Query: 112 RYCAVHDVGRAINAF------------YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEH 159
+ + A+ F Y Y F G L A+ RY+ ++
Sbjct: 400 GFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGES--LKAIKRYELMKSKGI 457
Query: 160 LMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYS 219
+ DV N +++ +G + A+RV+ E+ G+C D ++++ +I C S
Sbjct: 458 V----PDVVAGNAVLYSLAKSGRLGM------AKRVFHELKSIGVCPDNITYTMMIKCCS 507
Query: 220 KARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVV 279
KA N + +++F +M D N++I L K +A + ++E + P
Sbjct: 508 KASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDC 567
Query: 280 TYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESM 336
TYN+L+ L + K+ E +EM P + TY+ LD + EV G+L +M
Sbjct: 568 TYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNM 627
Query: 337 RKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
GC P +Y + + + F+++ ++ + PD ++ ++ + NG +
Sbjct: 628 TMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLM 686
Query: 397 EEAHQYYMEMKEKQLLPEPKTD 418
EA +KE L P K D
Sbjct: 687 NEALH---TLKEYILQPGSKAD 705
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 64/360 (17%)
Query: 109 LIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHL---- 160
LIR C +A+ A K+F+ ++G+ + L+ L + AE L
Sbjct: 747 LIRHLCKSK---KALEAHELVKKFE-SLGVSLKTGSYNALICGLVDENLIDVAEGLFSEM 802
Query: 161 --MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAE---RVWMEMSQRGICYDVVSFSCII 215
+ C+ D F ++N+IL+ +G S E +V EM +G V+++ II
Sbjct: 803 KRLGCDPDEF-----TYNLILDA----MGKSMRIEDMLKVQKEMHCKGYESTYVTYNTII 853
Query: 216 SCYSKARNLHKVLRL-----------------------------------FDQMKRMGIE 240
S K++ L++ + L FD+M G +
Sbjct: 854 SGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCK 913
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
+R +YN +++ + L ++M ++G+ P++ +Y LI LC A +L+++
Sbjct: 914 PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY 973
Query: 301 FDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
F ++ + G+ P + TY+ + + R+G EE L M K G P TY LI +
Sbjct: 974 FRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGK 1033
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ K++ E+ +NG P+ +Y ALI ++G + A Y +M P T
Sbjct: 1034 EGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSST 1093
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 142/344 (41%), Gaps = 10/344 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T++A LG+ K L++EM P+L+T T+L + C +V A+ Y
Sbjct: 569 YNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCL---CKNGEVNYALGMLY 625
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN-KDVFPFNTKSFNIILNGWCNII 186
+ + L L + + +A + FC K V + + IL +
Sbjct: 626 NMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRI-FCQMKKVLAPDYTTLCTILPSFVKN- 683
Query: 187 GSSREAERVWME-MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
G EA E + Q G D SF ++ K + K + + + I D
Sbjct: 684 GLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFF 743
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
+ +I L K + +A L+K E GV+ +YN+LI L +D A F EM
Sbjct: 744 LSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMK 803
Query: 306 QRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI---MLIKKFSRWRQFG 362
+ G P TY+ LD + + +L+ ++M C+ TY+ +I + +
Sbjct: 804 RLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLY 863
Query: 363 NVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
++ ++ G P +Y L+ L +GK+E+A + EM
Sbjct: 864 EAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM 907
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 41/241 (17%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G REA V+ M+ GI V ++S ++ + K R++ V+ L +M+ G++ + Y
Sbjct: 196 GYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSY 254
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
I L + ++A +++ ME++G P+VVT LI+ LC A ++ +A+ F
Sbjct: 255 TICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVF----- 309
Query: 307 RGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
M+ +P TYI L+ K +V +
Sbjct: 310 ---------------------------WKMKASDQKPDRVTYITLLDKCGDNGDSRSVIE 342
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSY 426
+WN + +G + +YTA++ AL G+++EA + +MK+K + P Q +SY
Sbjct: 343 IWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEP--------QQYSY 394
Query: 427 N 427
N
Sbjct: 395 N 395
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 156/352 (44%), Gaps = 12/352 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ G Y+++I+ K + + A L + M GP+ T ++ I Y
Sbjct: 383 KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMN--IHGPT-PNGYTYVLFINYYGKS 439
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKS 174
+ +AI + K + +L +L + + A+ + K V P N +
Sbjct: 440 GESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI-T 498
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ +++ C+ ++ EA +V+ EM + DV++ + +I KA ++ ++F ++
Sbjct: 499 YTMMIK-CCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
K M ++ YN ++ L + VK+ + L++ M PN++TYN+++ LCK ++
Sbjct: 558 KEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEV 617
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMRKMGCQPTNDTYIML 351
+ A M +G P + +Y+ L + + E F + M+K+ P T +
Sbjct: 618 NYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTI 676
Query: 352 IKKFSRWRQFGNVFKVWNE-ISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
+ F + E I + G+ DRSS+ +L+ + +E++ ++
Sbjct: 677 LPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEF 728
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ + + R++ +V FD M+R ++ + + + +L ++ A + M+E G
Sbjct: 121 LMRAHGRVRDMAQV---FDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII--RTGEEVFG 331
+ N TYN LI L K+ EA + + M GI P++RTY + R E V
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVW 237
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
LL M G +P +Y + I+ + +F +K+ ++ + G PD + T LI L
Sbjct: 238 LLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILC 297
Query: 392 LNGKLEEAHQYYMEMKEKQLLPE 414
G++ +A + +MK P+
Sbjct: 298 DAGRVSDAKDVFWKMKASDQKPD 320
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 6/254 (2%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +L G G +E + EM+ ++++++ ++ C K ++ L +
Sbjct: 568 TYNTLLAGLGRE-GKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
M G D YN +H L K + +A + M+ K +AP+ T +++ K
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGL 685
Query: 294 LDEARQAFDE-MLQRGISPTIRTYHAFLDII--RTGEEVFGLLESMRKMGCQPTNDTYIM 350
++EA E +LQ G ++H+ ++ I R G E + +D ++
Sbjct: 686 MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745
Query: 351 -LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
LI+ + ++ ++ + G SY ALI L ++ A + EMK
Sbjct: 746 PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805
Query: 410 QLLPEPKTDELLQD 423
P+ T L+ D
Sbjct: 806 GCDPDEFTYNLILD 819
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 155/349 (44%), Gaps = 10/349 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +MI +L K F A L+DEMR ++ + + LIRRY A + F
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVP---ISSRLIFALIRRYVRAEMPSEAADLFR 194
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNV-QDAEHLMFCNKDVFPFNTKSFNIILNGWCNII 186
+ + L A K + +A+ L + VF + + +++ WC
Sbjct: 195 RMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRA- 253
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G EAERV+ EM Q GI +V +++ +I +A + + L QM G + +
Sbjct: 254 GQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATF 313
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK--LDEARQAFDEM 304
NA++ A K + + + M + P+++TYN LI+ C + LD A + D+M
Sbjct: 314 NAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKM 373
Query: 305 LQRGISPTIRTYHA---FLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ + P T++ L ++ L E MR++ C+P TY L+K F++ +
Sbjct: 374 IAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEKSM 433
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
V ++ + G P+ +Y ALI A G + AH EM E++
Sbjct: 434 DMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEK 482
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 163 CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKAR 222
C D FN F +++ ++G+ A +++ +M + +VV+++C++ ++K +
Sbjct: 378 CVPDCHTFNPM-FRLLV-----VLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEK 431
Query: 223 NLHKVLRLFDQMKRMGIECDRKVYNAVIHAL-AKGRLVKDAISLMKSMEEKGVAPNVVTY 281
++ VLR+ M GIE + Y A+I A +G + +L + +EEK P+
Sbjct: 432 SMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQVR 491
Query: 282 NSLIKPLCKARKLDEARQAFDEMLQRG 308
+ ++ L KA +L + + + M+ RG
Sbjct: 492 DMVLVLLRKAGQLKKHEELVELMVDRG 518
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 3/156 (1%)
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLESMR 337
Y S+I L K AR DEM +R + + R A + E E L M
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRME 197
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ G + + ++ + + + PD YTA++HA G+L+
Sbjct: 198 EYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGQLD 257
Query: 398 EAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVER 433
EA + + EM++ ++P T + D Y V R
Sbjct: 258 EAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPR 293
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 169/367 (46%), Gaps = 10/367 (2%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G+ S + +++ + + A + D+M G P++V T+ I
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI---ID 194
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFP 169
C V A++ ++ + + L+S LC DA ++ C ++++P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 170 FNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLR 229
+ +FN +++ C G EAE + EM +R + D+V++S +I L +
Sbjct: 255 -DVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 230 LFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+F M G D Y+ +I+ K + V+ + L M ++GV N VTY LI+ C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 290 KARKLDEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTND 346
+A KL+ A + F M+ G+ P I TY+ L + G E+ +L M+K G
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 347 TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEM 406
TY ++I+ + + + + ++ ++ G PD +YT ++ L+ G EA + +M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 407 KEKQLLP 413
KE +LP
Sbjct: 493 KEDGILP 499
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 47/374 (12%)
Query: 122 AINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFNIILN 180
+++ F+ + + I DF LLSA+ + K +L + + P N + NI+LN
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIE 240
+C S A +M + G +V+F +++ + + ++ L +FDQM MG +
Sbjct: 125 CFCRCSQLSL-ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC----------- 289
+ +YN +I L K + V +A+ L+ ME+ G+ P+VVTYNSLI LC
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 290 ------------------------KARKLDEARQAFDEMLQRGISPTIRTYHAFL----- 320
K ++ EA + ++EM++R + P I TY +
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 321 -DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPD 379
+ EE+FG + S GC P TY +LI + + ++ + K++ E+S+ G +
Sbjct: 304 YSRLDEAEEMFGFMVS---KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 380 RSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLK 439
+YT LI GKL A + + M + P T +L + +E+ + L
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL- 419
Query: 440 AHQPQSGQNTRVIS 453
A ++G + +++
Sbjct: 420 ADMQKNGMDADIVT 433
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 170/388 (43%), Gaps = 15/388 (3%)
Query: 35 SEVLSWVRNDWEAAFTFFLWAGKQS-GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRG 93
S +LS + + +LW Q G H+ + ++ + + A + + +M
Sbjct: 85 SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIK 144
Query: 94 GETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKN 153
PS+VT +LL +C V A+ F + + + ++ LC+ K
Sbjct: 145 LGHEPSIVTFGSLL---NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 154 VQDAEHLMF-CNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFS 212
V +A L+ KD + ++N +++G C+ G +A R+ M++R I DV +F+
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS-GRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 213 CIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEK 272
+I K + + +++M R ++ D Y+ +I+ L + +A + M K
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 273 GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG----- 326
G P+VVTY+ LI CK++K++ + F EM QRG+ TY + R G
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 327 EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTAL 386
EE+F M G P TY +L+ + + ++ +NG D +Y +
Sbjct: 381 EEIF---RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 387 IHALFLNGKLEEAHQYYMEMKEKQLLPE 414
I + G++ +A Y + + L+P+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 166/353 (47%), Gaps = 50/353 (14%)
Query: 39 SWVRND--WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGET 96
+ R D ++A + F G GY + Y+T+I L K ++ D A L++ M
Sbjct: 160 GFCRGDRVYDALYMFDQMVGM--GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 97 GPSLVTKQTLL-----------------ILIRR--------YCAVHDV----GRAINAFY 127
GP +VT +L+ + +R + A+ D GR A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 128 AYK---RFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGW 182
Y+ R I + L+ LC Y + +AE + +K FP + +++I++NG+
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGY 336
Query: 183 CNIIGSSREAE---RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
C S++ E +++ EMSQRG+ + V+++ +I Y +A L+ +F +M G+
Sbjct: 337 CK----SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ YN ++H L ++ A+ ++ M++ G+ ++VTYN +I+ +CKA ++ +A
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 300 AFDEMLQRGISPTIRTYHA-FLDIIRTG--EEVFGLLESMRKMGCQPTNDTYI 349
+ + +G+ P I TY L + + G E L M++ G P N+ Y+
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP-NECYV 504
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 161/332 (48%), Gaps = 16/332 (4%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
++ M+ + + +FD A L+D MR + P LV+ T LI R G A+ +
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNT-LINARAKSGCLAAGVALELLH 282
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDA----EHLMF--CNKDVFPFNTKSFNIILNG 181
++ + L+SA + N+ DA E ++ C D++ +N + ++G
Sbjct: 283 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAM---VSVHG 339
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G ++EAE ++ E+ ++G D V+++ ++ ++K ++ +V R+ +++ + G
Sbjct: 340 RC---GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 396
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
D YN +IH K + A+ L M G P+ VTY L+ L K ++ EA +
Sbjct: 397 DGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 456
Query: 302 DEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
+EM G+ PT+ T+ A + ++G ++ + M + G +P Y++++ F+R
Sbjct: 457 EEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS 516
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
+ + ++ + ++G PD Y L+ AL
Sbjct: 517 DETRKLMVLYRAMIKDGYKPDDGLYQVLLAAL 548
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 138 IEDFQGLLSALCRYKNVQDAEHLMFC--NKDVFPFNTKSFNIILNG----WCNIIGSSRE 191
++ F ++ R DA L+ ++D+ P + SFN ++N C G + E
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEP-DLVSFNTLINARAKSGCLAAGVALE 279
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
+ E+ Q G+ D ++++ +IS S+ NL + +F++M D YNA++
Sbjct: 280 ---LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
+ ++A + K + EKG P+ VTYNSL+ K ++ + +E+++ G
Sbjct: 337 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 396
Query: 312 TIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVW 368
TY+ + + + G + GL + MR +GC P TY +L+ + + KV
Sbjct: 397 DGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 456
Query: 369 NEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
E+++ G P +++ALI A +G+ ++A + + M E + P+
Sbjct: 457 EEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPD 502
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 45/320 (14%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+Q+G Y+T+I+ + D A A+ +EM E P L T
Sbjct: 285 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT-------------- 330
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--CNKDVFPFNTKS 174
+ ++S R Q+AE LMF + F + +
Sbjct: 331 ------------------------YNAMVSVHGRCGKAQEAE-LMFKELVEKGFQPDAVT 365
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+N +L + G ERV E+ + G D ++++ +I Y K L L L+D+M
Sbjct: 366 YNSLLYAFAK-EGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEM 424
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ +G D Y ++ +L K + +A +++ M + G+ P +VT+++LI K+ +
Sbjct: 425 RAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQ 484
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLL---ESMRKMGCQPTNDTYIML 351
D+A + FD M++ G+ P Y LD+ +E L+ +M K G +P + Y +L
Sbjct: 485 DDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVL 544
Query: 352 IKKFSRWRQFGNVFKVWNEI 371
+ ++ + + V ++
Sbjct: 545 LAALAKGNEHDEIEGVIQDM 564
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE V++ ++ G V F+ ++ Y+++ +L D M+ IE D +N +I+
Sbjct: 207 AEDVFLRFAREGATVQV--FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 252 ALAKGRLVKD--AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
A AK + A+ L+ + + G+ P+ +TYN+LI + LD+A F+EM+
Sbjct: 265 ARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC 324
Query: 310 SPTIRTYHAFLDII-RTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFK 366
P + TY+A + + R G +E + + + + G QP TY L+ F++ V +
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVER 384
Query: 367 VWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
V E+ + G D +Y +IH G+L+ A Y EM+ P+ T +L D
Sbjct: 385 VCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVD 441
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 133/338 (39%), Gaps = 41/338 (12%)
Query: 80 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 139
+ D + ++ E++ + ++K T+L+++ + DV + + K + +
Sbjct: 832 RLDELYVVVQELQDLDIK---ISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMH 888
Query: 140 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
++ ++S LC K +D E ++ EM
Sbjct: 889 LYRIMISLLCHNKRFRDVELMV-----------------------------------AEM 913
Query: 200 SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLV 259
G D+V + ++ Y+ N + + ++ + G+E D YN +I ++
Sbjct: 914 EGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRP 973
Query: 260 KDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF 319
++ +L+ M ++G+ P + +Y L+ KA+ ++A F+EM +G YH
Sbjct: 974 EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMM 1033
Query: 320 LDIIRTG---EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGN 376
+ I R + LL +M++ G +PT T +L+ + KV N + +
Sbjct: 1034 MKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNL 1093
Query: 377 GPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPE 414
Y+ ++ A N +EMK + P+
Sbjct: 1094 EISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPD 1131
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 144/360 (40%), Gaps = 42/360 (11%)
Query: 20 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQSGYAHSTREYHTMIAILGKV 78
++++ IK+S V +L + ++ G K +GY + Y MI++L
Sbjct: 841 QELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 900
Query: 79 RKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGI 138
++F ++ EM G P LV TLL++ Y + R I +++ G+
Sbjct: 901 KRFRDVELMVAEMEGAGFKPDLVVLNTLLLM---YTGTGNFDRTIEVYHSI----LEAGL 953
Query: 139 EDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWME 198
E + + L ++ +++ P E + E
Sbjct: 954 EPDEDTYNTL-----------IVMYSRNFRP--------------------EEGFTLLYE 982
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
M +RG+ + S+ +++ KA+ + LF++M+ G +R +Y+ ++ R
Sbjct: 983 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 1042
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA 318
A L+ +M+E G+ P + T + L+ + DEA + + + + + Y
Sbjct: 1043 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYST 1102
Query: 319 FLDI-IRTGEEVFGL--LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
LD +R + G+ L M++ G +P + + I+ S Q + + + + G
Sbjct: 1103 VLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1162
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKG 273
++ ++KA ++ +V+++++ MK G + +Y +I L + +D ++ ME G
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAG 917
Query: 274 VAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVF 330
P++V N+L+ D + + +L+ G+ P TY+ + + EE F
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 977
Query: 331 GLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
LL M K G P ++Y +L+ + + + ++ E+ G +RS Y ++ +
Sbjct: 978 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMK-I 1036
Query: 391 FLNGKLEEAHQYYME-MKEKQLLPEPKTDELL 421
+ N + ++ + MKE + P T +L
Sbjct: 1037 YRNARNHSKAEHLLSAMKEDGIEPTIATMHIL 1068
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 9/213 (4%)
Query: 214 IISCYSKARNLHKVLRLFDQMKRM--GIE----CDRKVYNAVIHALAKGRLVKDAISLMK 267
I+SC + L+L+ Q + G++ DR+++NA+IHA A+ L + A ++
Sbjct: 747 ILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFD 806
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
M +KG P V + N +++ L +LDE E+ I + T L+
Sbjct: 807 IMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 866
Query: 328 EVFGLLE---SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYT 384
+VF +++ M+ G P Y ++I ++F +V + E+ G PD
Sbjct: 867 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 926
Query: 385 ALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
L+ G + + Y + E L P+ T
Sbjct: 927 TLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDT 959
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 6/271 (2%)
Query: 143 GLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQR 202
++ A + K Q AE+ + K + + +N +++ + G A ++ M ++
Sbjct: 753 AMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAES-GLYEHARAIFDIMIKK 811
Query: 203 GICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDA 262
G V S + ++ L ++ + +++ + I+ + ++ A AK V +
Sbjct: 812 GPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEV 871
Query: 263 ISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI 322
+ + M+ G PN+ Y +I LC ++ + EM G P + + L +
Sbjct: 872 MKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLL-L 930
Query: 323 IRTGEEVFG----LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+ TG F + S+ + G +P DTY LI +SR + F + E+ + G P
Sbjct: 931 MYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTP 990
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
SY L+ A E+A + EM+ K
Sbjct: 991 KLESYKILLAASGKAKLWEQADLLFEEMRTK 1021
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 50/367 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G+ Y+TMI + GK+ + D A L DEMR P VT L+ + + +
Sbjct: 391 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 450
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSAL-CRYKNVQDAEHLMFCNKDVFPFNTKSFN 176
+ G+ + G++ SAL C Y KS
Sbjct: 451 EAGKVLEEMAD-------AGLKPTLVTFSALICAY--------------------AKS-- 481
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
G +AER + M + G+ D +++ ++ ++++ K++ L+ M +
Sbjct: 482 ----------GRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIK 531
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G + D +Y ++ ALAKG + +++ ME +V + LIK C ++
Sbjct: 532 DGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQGASL 591
Query: 297 ARQAFDEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTN---DTYIM 350
++A +G P ++ + LD + E+ LLE +R+ N + IM
Sbjct: 592 LKRA----CLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIM 647
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ K + + + G D Y LI L EA Q + +M+
Sbjct: 648 LLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLG 707
Query: 411 LLPEPKT 417
++P K
Sbjct: 708 IVPSQKV 714
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 43/411 (10%)
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
+++ + +L + +++D AL +M L T L I+I +C +G A +A
Sbjct: 92 DFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT---LNIMINCFCRRRKLGFAFSAM 148
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN------KDVFPFNTK------- 173
+ + F LL+ LC V +A L+ C D+ NT
Sbjct: 149 GKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLK 208
Query: 174 -----------------------SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS 210
++ ILN C G++ A + +M R I VV+
Sbjct: 209 DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS-GNTASALDLLRKMEHRKIKPHVVT 267
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
++ II K L L F +M+ GI+ + YN++I + D L++ M
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGE 327
+ + PNVVT+++LI L K KL EA+ ++EM+ RGI P TY++ + + + +
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E +++ M GC P TY +LI F + +Q + +++ ++S G D +Y+ LI
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447
Query: 388 HALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASL 438
+ KL A + + EM + + P T +L D + +E + L
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 155/340 (45%), Gaps = 10/340 (2%)
Query: 83 TAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQ 142
+A L+ +M + P +VT I+I C + A++ F + + +
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYT---IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYN 304
Query: 143 GLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMS 200
L+ + C + D L+ + + P N +F+ +++ G EA+ ++ EM
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITP-NVVTFSALIDSLVKE-GKLTEAKDLYNEMI 362
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
RGI + ++++ +I + L + ++ D M G + D YN +I+ K + V
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVD 422
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
D + L + M +G+ + VTY++LI+ C++RKL A++ F EM+ +G+ P I TY L
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
D + G EE G+L+ M K + Y ++I + + + ++ + G
Sbjct: 483 DGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D SY ++ L L EA + +MKE P+ T
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCT 582
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 62/343 (18%)
Query: 46 EAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQT 105
+ A +FF + G + Y+++I ++D L+ +M + P++VT
Sbjct: 282 DDALSFF-SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSA 340
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE----DFQGLLSALCRYKNVQDAEHLM 161
L+ + + G+ A Y GIE + L+ LC K + +A +M
Sbjct: 341 LIDSLVKE------GKLTEAKDLYNEM-ITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393
Query: 162 ------FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
C+ D++ ++NI++NG+C + R++ +MS RG+ D V++S +I
Sbjct: 394 DLMVSKGCDPDIW-----TYNILINGFCKA-KQVDDGMRLFRKMSLRGMIADTVTYSTLI 447
Query: 216 SCYSKARNL-----------------------------------HKVLRLFDQMKRMGIE 240
+ ++R L + L + DQM + +E
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507
Query: 241 CDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQA 300
D +YN +IH + V DA SL S+ KGV ++ +YN ++ LCK L EA
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADAL 567
Query: 301 FDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLESMRKMG 340
F +M + G P TY+ + G ++ L+E M++ G
Sbjct: 568 FRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 208 VVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMK 267
V+ F+ + ++ + VL L QM+ GI D N +I+ + R + A S M
Sbjct: 90 VIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMG 149
Query: 268 SMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---- 323
+ + G PN VT+N+L+ LC ++ EA + D M+ P + T + ++ +
Sbjct: 150 KIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKD 209
Query: 324 RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
R E V L+ M GCQP TY ++ + + + + ++ P +Y
Sbjct: 210 RVSEAV-DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTY 268
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQL 411
T +I L +G+L++A ++ EM+ K +
Sbjct: 269 TIIIDNLCKDGRLDDALSFFSEMETKGI 296
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 7/270 (2%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G +T Y+++I L ++ D A ++D M P + T ILI +C V
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN---ILINGFCKAKQV 421
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
+ F + L+ C+ + + A+ + ++ V P ++ I
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHP-GIMTYAI 480
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+L+G C+ G EA + +M + + D+ ++ II A + LF +
Sbjct: 481 LLDGLCDN-GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK 539
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
G++ D + YN ++ L K + +A +L + M+E G P+ TYN+LI+ + + +
Sbjct: 540 GVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTS 599
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGE 327
Q +EM + G S T +D++ +GE
Sbjct: 600 VQLIEEMKRCGFSSDASTVKIVMDMLSSGE 629
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 7/281 (2%)
Query: 148 LCRYKNVQDAEHL--MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
LCR +++AE + + V P N +++ +++G+C G+ R+A ++ E+ +
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLP-NLYTYSAMIDGYCKT-GNVRQAYGLYKEILVAELL 301
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+VV F ++ + KAR L LF M + G++ + VYN +IH K + +A+ L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII-- 323
+ ME ++P+V TY LI LC ++ EA + F +M I P+ TY++ +
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 324 -RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
E+ L M G +P T+ LI + R ++ E++ G PD +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
YTALI A F ++EA + Y +M E + P T L D
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 147/332 (44%), Gaps = 16/332 (4%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L+DEM P++ I I C + + A F K+ + + ++
Sbjct: 221 LLDEMTSLGIKPNVYIYT---IYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Query: 147 ALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSRE---AERVWMEMSQ 201
C+ NV+ A L ++ P N F +++G+C +RE A +++ M +
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLP-NVVVFGTLVDGFCK----ARELVTARSLFVHMVK 332
Query: 202 RGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKD 261
G+ ++ ++C+I + K+ N+ + + L +M+ + + D Y +I+ L V +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 262 AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD 321
A L + M+ + + P+ TYNSLI CK +++A EM G+ P I T+ +D
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 322 ---IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+R + GL M G P TY LI + ++++++ E G P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ ++ L+ + G+L A +Y E +++
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 180/420 (42%), Gaps = 23/420 (5%)
Query: 14 KRSEMRNKIEECGIKVSSELVS-EVLSWVR-NDWEAAFTFFLWAGKQSGYAHSTREYHTM 71
K+ ++ +++ GIK + + + +L R N E A F K+ G + Y M
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM-KKHGVLPNLYTYSAM 275
Query: 72 IAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR 131
I K A+ L E+ E P++V TL + +C ++ A + F +
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL---VDGFCKARELVTARSLFVHMVK 332
Query: 132 FKFAVGIEDFQGLLSALCRYKNVQDAEHLMF------CNKDVFPFNTKSFNIILNGWCNI 185
F + + L+ C+ N+ +A L+ + DVF ++ I++NG C I
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF-----TYTILINGLC-I 386
Query: 186 IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKV 245
EA R++ +M I +++ +I Y K N+ + L L +M G+E +
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 246 YNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
++ +I R +K A+ L M KG+ P+VVTY +LI K + EA + + +ML
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 306 QRGISPTIRTYHAFLDII----RTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ GI P T+ +D R + E+ ++ C + + LI+ +
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW-NHVGFTCLIEGLCQNGYI 565
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELL 421
+ ++++ G PD SY +++ ++ + +M + +LP ++LL
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 23/343 (6%)
Query: 121 RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---EHLMFCNKDVFPFNTKSFNI 177
R NA + KF++G+ F L+ ++A M C+ D +K+
Sbjct: 117 RLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEALWVSREMKCSPD-----SKACLS 169
Query: 178 ILNGWCNIIGSSREAERVWME---MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
ILNG + R + VW++ M RG+ DV + + C K K +L D+M
Sbjct: 170 ILNG----LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+GI+ + +Y I L + +++A + + M++ GV PN+ TY+++I CK +
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVF---GLLESMRKMGCQPTNDTYIML 351
+A + E+L + P + + +D E+ L M K G P Y L
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + +E+ PD +YT LI+ L + ++ EA++ + +MK +++
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 412 LPEPKT-DELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
P T + L+ Y K++ Q L + SG +I+
Sbjct: 406 FPSSATYNSLIH--GYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 3/244 (1%)
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
G + E++ EM+ GI +V ++ I + + + ++F+ MK+ G+ + Y
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQ 306
+A+I K V+ A L K + + PNVV + +L+ CKAR+L AR F M++
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 307 RGISPTIRTYHAFL-DIIRTGE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGN 363
G+ P + Y+ + ++G E GLL M + P TY +LI Q
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 364 VFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+++ ++ P ++Y +LIH +E+A EM + P T L D
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 424 WSYN 427
N
Sbjct: 453 GYCN 456
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 15/357 (4%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAE--HLMFCNK 165
+L+R + ++ A N F + + F ++S +CR ++ AE H
Sbjct: 245 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 304
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
V P + ++ ++ G C + G +A V+ +M RG+ + V F+ +I + K +
Sbjct: 305 GVTP-DVYTYGALIQGLCRV-GRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
+L L +M+ G+ D YNA+++ L + R +K A ++ M G+ P+ VTY +LI
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG-----EEVFGLLESMRKM 339
CK +LD A + M+ G+ TY A + + + G E V G M +
Sbjct: 423 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG---EMMEA 479
Query: 340 GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEA 399
G +P N TY M+I F R ++ E+ G P +Y +++ G+++ A
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 539
Query: 400 HQYYMEMKEKQLLPEPKTDELLQDW--SYNKQFVERQIASLKAHQPQSGQNTRVISK 454
M + P+ T +L D + K ++ S K P G T ++ +
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIVGE 596
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 5/289 (1%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKV 227
P K FN+++ + G A+ V+ EM RG+ VVSF+ +IS +A +L
Sbjct: 236 LPPEAKLFNVLMRDLVRL-GELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L +M G+ D Y A+I L + ++DA + + M +G+ PN V + LI
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPT 344
CK + + EM +RG+ P TY+A ++ + R + G++ MR G +P
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY LI + + + ++ + G G D +YTALI L G+ +A +
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474
Query: 405 EMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVIS 453
EM E L P+ T ++ D K V+ + LK Q G+ V++
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ-NKGRKPGVVT 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
++G Y +I L +V + + A + ++M G P+ V ILI +C
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV---FTILIDAHCKKG 359
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDV-FPFNTKSFN 176
D + + + +++ LCR ++++ A ++ + +T ++
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 419
Query: 177 IILNGWCNIIGSSREAERVWMEMSQ----RGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+++G+C E + ME+ Q G+ D V+++ +IS SKA R+
Sbjct: 420 TLIDGYCK-----EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
+M G+E D Y VI A + VK + L+K M+ KG P VVTYN ++ CK
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAFLD 321
++ A + M+ G+SP TY+ LD
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLD 563
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 14/240 (5%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
++ G Y+ ++ L + R +A ++ EMR P VT T LI YC
Sbjct: 372 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT---LIDGYCKE 428
Query: 117 HDVGRAINAFYAYKRFKFAVGIED--FQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNT 172
++ A+ VG+++ + L+S L + DAE ++ + P NT
Sbjct: 429 EELDMAME--IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 486
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
++ ++++ +C G + R+ EM +G VV+++ I++ + K + L +
Sbjct: 487 -TYTMVIDAFCR-KGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 544
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M +G+ D YN ++ K V D I +KS KG P++ Y S++ + K +
Sbjct: 545 AMINIGVSPDDITYNILLDGHCKHGKVTD-IEELKS--AKGTVPDLGVYTSIVGEIVKKK 601
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 167/395 (42%), Gaps = 32/395 (8%)
Query: 48 AFTFFLWAGKQSGY--AHSTREYHTMIAILGKVRKFDTA------------------WAL 87
A F W KQ G H T Y IL K R +D+A AL
Sbjct: 844 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 903
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSA 147
+D + PS+ +LIR Y + A+ F F + +L++
Sbjct: 904 MDTYPLCNSIPSVFD-----LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 958
Query: 148 LCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGIC 205
+ + K + L +K + P N +FNI++NG C + G+ ++A + +M + G
Sbjct: 959 MVKDKRTELVWSLFREMSDKGICP-NVGTFNILINGLC-VEGNLKKAGNLLKQMEENGFV 1016
Query: 206 YDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISL 265
+V+++ +++ Y K + L D M GIE D YN I L A L
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 1076
Query: 266 MKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---I 322
+K M ++ ++PN VTYN+LI K K+ A Q F+EM + +SP TY+A +
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136
Query: 323 IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSS 382
+ EE LL+ M G + TY L+ + +F ++ + N +
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 1196
Query: 383 YTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
YT LI L NG L+EA Q M + + P+ T
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVIT 1231
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 161/379 (42%), Gaps = 19/379 (5%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y +I L K D A L+ M P ++T +L I +C V ++ A
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL---INGFCRVGNIKSAKEIIC 1253
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL---MFCN---KDVFPFNTKSFNIILNG 181
R + + L+ C++ NV +A + M CN D F + N++++
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF-----TCNVLVSS 1308
Query: 182 WCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC 241
C G EAE+ MS+ G+ + +++ CII+ Y + FD M + G
Sbjct: 1309 LCRD-GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 1367
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
Y +++ L KG + +A + + A + V YN+L+ CK+ L EA F
Sbjct: 1368 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 1427
Query: 302 DEMLQRGISPTIRTYHAFLD-IIRTGEEVFGLLESMRKMG---CQPTNDTYIMLIKKFSR 357
D+M+Q + P TY + L + R G+ V + MG P + Y L+ S+
Sbjct: 1428 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 1487
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
F + E+ + G PD ++ A+I + G++ +A+ ++ M+ + P T
Sbjct: 1488 AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT 1547
Query: 418 DELLQDWSYNKQFVERQIA 436
+L KQ + R ++
Sbjct: 1548 YNILLHGFSKKQALLRYLS 1566
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 165/400 (41%), Gaps = 49/400 (12%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ S + ++A + K ++ + W+L EM P++ T ILI C ++
Sbjct: 944 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNV---GTFNILINGLCVEGNL 1000
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALC---RYKNVQDAEHLMFCN------------ 164
+A N + F I + LL+ C RYK + M C
Sbjct: 1001 KKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVF 1060
Query: 165 ---------------------KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
K++ N ++N ++NG+ G A +V+ EMS+
Sbjct: 1061 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKE-GKIGVAAQVFNEMSKFD 1119
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ + V+++ +I + + + LRL D M+ G+ + Y +++ L K + A
Sbjct: 1120 LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAK 1179
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-- 321
L++ M + + Y LI LCK LDEA Q M + G++P + TY + ++
Sbjct: 1180 RLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF 1239
Query: 322 ----IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNG 377
I++ +E+ + M + G Y LI F + KV+ ++ NG+G
Sbjct: 1240 CRVGNIKSAKEI---ICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHG 1296
Query: 378 PDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
D + L+ +L +GKL EA ++ M L+P T
Sbjct: 1297 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 1336
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 19/373 (5%)
Query: 52 FLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIR 111
FL + G ++ Y +I G + A++ D+M PS T +LL +
Sbjct: 1321 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL---K 1377
Query: 112 RYCAVHDVGRAINAFYAYKRFKFAVGIED---FQGLLSALCRYKNVQDAEHLM--FCNKD 166
C G + A R + G D + LL+ C+ N+ +A L +
Sbjct: 1378 GLC---KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICY-DVVSFSCIISCYSKARNLH 225
V P ++ +++ +L G C G + A ++ RG + + V ++C++ SKA +
Sbjct: 1435 VLP-DSYTYSSLLTGLCRK-GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 1492
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
F++M + G D +NA+I + ++ G+++K A +M GV PN+ TYN L
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK-ANDFFSTMRWWGVCPNLATYNIL 1551
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGEEVFG--LLESMRKMGC 341
+ K + L + M++ GI P T+H+ L + ++G G LL M G
Sbjct: 1552 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 1611
Query: 342 QPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
T+ +LI K+S + F + N ++ G PDR +Y + + L E+
Sbjct: 1612 LADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 1671
Query: 402 YYMEMKEKQLLPE 414
EM E ++P+
Sbjct: 1672 VLHEMLENGVIPK 1684
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 3/233 (1%)
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
++ +M G D +F+ +I+ YS++ + K L + M +G+ DR YN + + L
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTI 313
K +++ ++ M E GV P Y +LI +C+ + A + DEM G
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 1720
Query: 314 RTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
A + ++ G E+ +L+ M +M PT T+ L+ +F R + K+
Sbjct: 1721 VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1780
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ G D +Y LI + NG A + Y EM+ + L P T +L D
Sbjct: 1781 MELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1833
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 167 VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
VFP + ++N I NG N + RE+ V EM + G+ + +I+ + ++
Sbjct: 1646 VFP-DRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 1703
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
+L D+M+ +G +A++ L +DA+ ++ M + P + T+ +L+
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1763
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGEE--VFGLLESMRKMGCQP 343
C+ K+ EA + M G+ + Y+ + + G+ F L E MR P
Sbjct: 1764 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCP 1823
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
TY +L+ S K+ ++ E G
Sbjct: 1824 NITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 144 LLSALCRYKNVQDA-------EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVW 196
L++ +CR ++Q A E L F + +V + + ++ G + G + +A V
Sbjct: 1691 LINGMCRVGDIQGAFKLKDEMEALGFGSHEV------AESAMVRGLLHC-GKTEDAMLVL 1743
Query: 197 MEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKG 256
M + + + +F+ ++ + + + + L+L M+ G++ D YN +I +
Sbjct: 1744 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 1803
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGI 309
A L + M + + PN+ TY L+ + A L + + ++ +RG+
Sbjct: 1804 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 175/403 (43%), Gaps = 9/403 (2%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL 107
A T FL + G + Y+ M+ +++ D A ++ EM P+ T
Sbjct: 467 AATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYS--- 523
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
ILI + D A F + +++ LC+ A+ ++ +
Sbjct: 524 ILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
+ S+N I++G+ G + A + EMS+ GI +VV+F+ +I+ + K+ +
Sbjct: 584 KRYSMGCTSYNSIIDGFFKE-GDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMD 642
Query: 226 KVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLI 285
L + +MK ++ D Y A+I K +K A +L + E G+ PNV YN+LI
Sbjct: 643 LALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLI 702
Query: 286 KPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTGEEVFG--LLESMRKMGCQ 342
K+D A + +M+ GIS + TY +D +++ G + L + +G
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIV 762
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
P Y++L+ S+ QF K+ E+ + P+ Y+ +I G L EA +
Sbjct: 763 PDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRV 822
Query: 403 YMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQS 445
+ EM EK L+ + LL K +I+SL + + +S
Sbjct: 823 HDEMLEKGLVHDDTIFNLLVSGRVEKPPAAAKISSLASPEMRS 865
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 132/322 (40%), Gaps = 84/322 (26%)
Query: 168 FPFNTKSFNIILNGWCNIIGSSR-EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHK 226
P + + ++ G+CN G+ +A + M + G+ D V FS +I + K + K
Sbjct: 341 IPMSVIAATSLITGFCN--GNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEK 398
Query: 227 VLRLFDQMKRMGI--------------------ECDRKVYNA-----VIHA--------- 252
+ ++ +MK +GI E +++N + H
Sbjct: 399 AVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL 458
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
L K V A S ++ ME KG+ PNVV YN+++ C+ + +D AR F EML++G+ P
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518
Query: 313 IRTYHAFLD--------------------------------II----------RTGEEVF 330
TY +D II + E +
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 331 GLLESMR-KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHA 389
L++ R MGC +Y +I F + + + + E+SENG P+ ++T+LI+
Sbjct: 579 NLIKEKRYSMGCT----SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLING 634
Query: 390 LFLNGKLEEAHQYYMEMKEKQL 411
+ +++ A + EMK K L
Sbjct: 635 FCKSNRMDLALEMIHEMKSKDL 656
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 227 VLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIK 286
V L D KR E + +N +++A + R + A+ M ++ V P V N+++
Sbjct: 153 VNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLS 212
Query: 287 PLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQP 343
L ++ +DEA++ +++M+ G++ T + R EE + + G +P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEP 272
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP-DRSSYTALIHALFLNGKLEEAHQY 402
+ + ++ + + + E+ E G P + +YT++I A G +EEA +
Sbjct: 273 DGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKV 332
Query: 403 YMEM 406
EM
Sbjct: 333 KDEM 336
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 128/306 (41%), Gaps = 24/306 (7%)
Query: 184 NIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDR 243
N++ SS+ R E+S R +F+ +++ Y + R + + F+ M +
Sbjct: 155 NLVDSSK---RFDFELSSR-------AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFV 204
Query: 244 KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE 303
N V+ +L + L+ +A + M GVA + VT L++ + RK +EA + F
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRR 264
Query: 304 MLQRGISP-------TIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP-TNDTYIMLIKKF 355
++ RG P ++ D++ LL MR+ G P + +TY +I
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKMKDLVMA----LDLLREMREKGGVPASQETYTSVIVAC 320
Query: 356 SRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG-KLEEAHQYYMEMKEKQLLPE 414
+ KV +E+ G + T+LI F NG +L +A ++ M+E+ L P+
Sbjct: 321 VKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITG-FCNGNELGKALDFFNRMEEEGLAPD 379
Query: 415 PKTDELLQDWSYNKQFVERQIASLKAHQPQSGQNTRVISKKSDQDREFLQQPETRRVVRH 474
++ +W +E+ + K + + V+ K Q + PE + +
Sbjct: 380 KVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439
Query: 475 QGFSFW 480
F W
Sbjct: 440 DSFETW 445
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 38/219 (17%)
Query: 212 SCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEE 271
S I++C K N+ + +++ D+M GI ++I G + A+ MEE
Sbjct: 315 SVIVACV-KEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEE 373
Query: 272 KGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH-------------- 317
+G+AP+ V ++ +I+ CK ++++A + + M GI+P+ H
Sbjct: 374 EGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEA 433
Query: 318 ---------------------AFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKK 354
FL + + G + L M G +P Y ++
Sbjct: 434 ALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLA 493
Query: 355 FSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
R + +++E+ E G P+ +Y+ LI F N
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKN 532
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 165 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 224
K + P ++FNI++NG C + G +A+ + M +G D+ +F+ +I YS +
Sbjct: 420 KGLIP-EVQTFNILVNGLCKM-GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 225 HKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSL 284
L + D M G++ D YN++++ L K +D + K+M EKG APN+ T+N L
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMG---- 340
++ LC+ KLD+A +EM + ++P T+ +D ++ G RKM
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+ TY ++I F+ K++ E+ + GPD +Y ++ G ++ +
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657
Query: 401 QYYMEMKEKQLLPEPKT 417
++ +EM E +P T
Sbjct: 658 KFLLEMMENGFIPSLTT 674
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 39/376 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRA----I 123
Y+ +I L K KF A + ++ P T TL I YC V A +
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL---IAGYCKGGMVQLAERILV 345
Query: 124 NA-FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILN 180
NA F + +F ++ L+ LC A L K + P N +N ++
Sbjct: 346 NAVFNGFVPDEFT-----YRSLIDGLCHEGETNRALALFNEALGKGIKP-NVILYNTLIK 399
Query: 181 GWCNIIGSSREAERVWMEMSQRGICYDVVSFS------CIISCYSKARNLHKVLRLFDQM 234
G N G EA ++ EMS++G+ +V +F+ C + C S A L KV M
Sbjct: 400 GLSNQ-GLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV------M 452
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
G D +N +IH + +++A+ ++ M + GV P+V TYNSL+ LCK K
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKY 512
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIML 351
++ + + M+++G +P + T++ L+ + ++ GLLE M+ P T+ L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572
Query: 352 IKKFSRWRQFGNVFKVWNEISE----NGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
I F + + ++ ++ E + + P +Y +IHA + A + + EM
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 408 EKQLLPEPKTDELLQD 423
++ L P+ T L+ D
Sbjct: 630 DRCLGPDGYTYRLMVD 645
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 190/507 (37%), Gaps = 101/507 (19%)
Query: 11 FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR---- 66
F H S R+ IE+ G+ E + EVL +R + ++ G Y +
Sbjct: 36 FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 67 -----------------EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLIL 109
Y+ +++IL FD A + MR P + + I
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDV---YSFTIR 152
Query: 110 IRRYCAV---HDVGRAIN-------------------AFY-------AYKRFK--FAVGI 138
++ +C H R +N FY Y+ F A G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212
Query: 139 E----DFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCNIIGSSREA 192
F LL LC+ +V++ E L+ + V P N ++N + G C G A
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLP-NLFTYNFFIQGLCQK-GELDAA 270
Query: 193 ERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
R+ + +G DVV+++ +I K + ++ G+E D YN +I
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
KG +V+ A ++ + G P+ TY SLI LC + + A F+E L +GI P
Sbjct: 331 YCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 313 IRTYHAFLD-------IIRTGE--------------EVFGLL-ESMRKMGCQPTND---- 346
+ Y+ + I+ + + F +L + KMGC D
Sbjct: 391 VILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 347 ------------TYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
T+ +LI +S + N ++ + + +NG PD +Y +L++ L
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTS 510
Query: 395 KLEEAHQYYMEMKEKQLLPEPKTDELL 421
K E+ + Y M EK P T +L
Sbjct: 511 KYEDVMETYKTMVEKGCAPNLFTFNIL 537
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 171/422 (40%), Gaps = 48/422 (11%)
Query: 42 RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLV 101
+ D A F K+ G+ H+ Y ++I LG KF+ ++ +MR + + +
Sbjct: 17 QKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR--QNVGNHM 74
Query: 102 TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM 161
+ + ++ Y V A+N F + + + ++S L A +
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY 134
Query: 162 FCNKD--VFPFNTKSFNIILNGWCNIIGSSRE--AERVWMEMSQRGICYDVVSFSCIISC 217
+D + P + SF I + +C +SR A R+ MS +G +VV++ ++
Sbjct: 135 MRMRDRGITP-DVYSFTIRMKSFCR---TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGG 190
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPN 277
+ + + LF +M G+ +N ++H L K VK+ L+ + ++GV PN
Sbjct: 191 FYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL----------------- 320
+ TYN I+ LC+ +LD A + ++ +G P + TY+ +
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLG 310
Query: 321 DIIRTGEEV--------------FGLLESMRKM-------GCQPTNDTYIMLIKKFSRWR 359
++ G E G+++ ++ G P TY LI
Sbjct: 311 KLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEG 370
Query: 360 QFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDE 419
+ ++NE G P+ Y LI L G + EA Q EM EK L+PE +T
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFN 430
Query: 420 LL 421
+L
Sbjct: 431 IL 432
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 141 FQGLLSALCR---YKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL+ LC+ Y++V + M K P N +FNI+L C + A +
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMV-EKGCAP-NLFTFNILLESLCRYHKLDK-ALGLLE 555
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM-GIECDRKVYNAVIHALAKG 256
EM + + D V+F +I + K +L LF +M+ + + C YN +IHA +
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEK 615
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
V A L + M ++ + P+ TY ++ CK +D + EM++ G P++ T
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTL 675
Query: 317 HAFLDIIRTGEEVF---GLLESMRKMGCQP 343
++ + + V+ G++ M + G P
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 31/237 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G A + ++ ++ L + K D A L++EM+ P VT T LI +C
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGT---LIDGFCKNG 580
Query: 118 DVGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
D+ A F + + + + ++ A NV AE L ++ + P + +
Sbjct: 581 DLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP-DGYT 639
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ ++++G+C G+ + +EM + G + + +I+C
Sbjct: 640 YRLMVDGFCK-TGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLC--------------- 683
Query: 235 KRMGIECDRKVYNA--VIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLC 289
+ +VY A +IH + + LV +A++ + ++K VA + L+K C
Sbjct: 684 ------VEDRVYEAAGIIHRMVQKGLVPEAVNTIFDHDKKEVAAPKLVLEDLLKKSC 734
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 172/399 (43%), Gaps = 53/399 (13%)
Query: 55 AGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYC 114
AG GY ++ +I+ + + A +++ M+G P+ VT ++ +
Sbjct: 223 AGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGG 282
Query: 115 AVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL------MFCNKDVF 168
D+ + F R + + F LLSA R +++DA L + +D++
Sbjct: 283 V--DLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIY 340
Query: 169 PFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVL 228
+NT ++ C G+ A +V ++M + + +VV++S +I YSK + L
Sbjct: 341 TYNT-----FIDAICKC-GNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEAL 394
Query: 229 RLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+L+++MK +GI+ DR YN V+ K + + ME+ G+ + VTYNSLI
Sbjct: 395 KLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGY 454
Query: 289 CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTY 348
K +LD +M +RG++P++ TY +DI
Sbjct: 455 GKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDI-------------------------- 488
Query: 349 IMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKE 408
+S+ G+ F V+ + E+G PD +++ I L NG +E A +M E
Sbjct: 489 ------YSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTE 542
Query: 409 KQLLPEPKTDELLQDWSYNKQFVERQIASLKAHQPQSGQ 447
+ P T + D ++ K V L P++G+
Sbjct: 543 MGIKPNVVTYNTIID-AFGKSKV------LSEEDPEAGE 574
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 21/317 (6%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G Y+T I + K + A ++ +M P++VT TL I Y +
Sbjct: 334 GIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTL---IDGYSKLEKY 390
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNK---DVFPFNTKSFN 176
A+ + K + + +L+ K + E + C++ +T ++N
Sbjct: 391 DEALKLYEKMKSLGIQLDRVCYNTVLAIYV--KAGKYGEIAIVCDEMEDSGIEKDTVTYN 448
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
++NG+ G + +M +RG+ V+++S +I YSKA ++ K
Sbjct: 449 SLINGYGKQ-GRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKE 507
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ D ++++ I LAK LV+ A+SL+ M E G+ PNVVTYN++I K++ L E
Sbjct: 508 SGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Query: 297 ARQAFDEM---------LQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKM---GCQPT 344
EM + R +P R A +R +E++ +LE +KM G +P
Sbjct: 568 EDPEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPN 627
Query: 345 NDTYIMLIKKFSRWRQF 361
T+ ++ SR F
Sbjct: 628 VVTFSAILNACSRCNNF 644
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 285 IKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTG--EEVFGLLESMRKMGC 341
I L K + D AR+AFD + G T+ A + R+G E G+LESM+ G
Sbjct: 205 IGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGL 264
Query: 342 QPTNDTYIMLIKKFSRWRQFGNV-----FKVWNEISENGNGPDRSSYTALIHALFLNGKL 396
+PT TY +I + G V + ++ + PDR ++ +L+ A G L
Sbjct: 265 RPTTVTYNAVIDACGK----GGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHL 320
Query: 397 EEAHQYYMEM 406
E+A + EM
Sbjct: 321 EDARALFDEM 330
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 9/369 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
KQ GY ++ + +L + + A DEM P +VT I++ R C
Sbjct: 106 KQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYT---IIVDRLCKA 162
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN-KDVFPFNTKSF 175
+A+ + + ++ L+ LC V A L K FN F
Sbjct: 163 KQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIF 222
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N +++G+C G +A + MS+ G D+++++ +++ + L + +M+
Sbjct: 223 NSLMSGFCKS-GRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKME 281
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
R+G+E D YN ++ L K + A LM +M EKG+ + V+YN++I LCK+
Sbjct: 282 RIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATR 340
Query: 296 EARQAFDEMLQRGISPTIRTYHAFLD--IIRTGEEVF-GLLESMRKMGCQPTNDTYIMLI 352
+A + F+EM Q+ ++P + T+ + +I + GLL++M + P Y ++
Sbjct: 341 KAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVV 400
Query: 353 KKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
F + R+ V+ ++ E G PD SY ALI+ L K+ EA Y EM+ +
Sbjct: 401 DYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCY 460
Query: 413 PEPKTDELL 421
P+ T +L+
Sbjct: 461 PDEVTFKLI 469
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 53/295 (17%)
Query: 141 FQGLLSALCRYKNVQDAEHL-MFCNKDVFPFNTKSFNIILNGWCN-----IIGSS-REAE 193
F L+S C+ + A + F +K + ++NI+LN +C+ + G S ++ E
Sbjct: 222 FNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKME 281
Query: 194 RVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHAL 253
R+ ME DV S++ ++ KA L K +L + M G+ CD YN VI AL
Sbjct: 282 RIGMEP-------DVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGAL 333
Query: 254 AKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL------------------------- 288
K + A L + M +K VAP+V T+ +LIK
Sbjct: 334 CKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDL 393
Query: 289 ----------CKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGEEV---FGLLES 335
CK RK++ A+ F +M++ GISP + +Y+A ++ + +V L E
Sbjct: 394 IFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEE 453
Query: 336 MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHAL 390
M+ GC P T+ ++I R ++ +VW+++ E G D+ LI A+
Sbjct: 454 MQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 38/258 (14%)
Query: 192 AERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIH 251
AE + M +G ++S IS + +N + RL + MK++G D +N ++
Sbjct: 63 AESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLN 122
Query: 252 ALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISP 311
L + L++ A+ M KG P+VVTY ++ LCKA++ D+A + + M+ +G+SP
Sbjct: 123 LLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSP 182
Query: 312 TIRTYHAFLDIIRTGEEV---------------------FGLLES--------------- 335
++ A + + G +V F L S
Sbjct: 183 DMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIK 242
Query: 336 --MRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
M K GC+P TY +L+ F K ++ G PD SY L+ L
Sbjct: 243 SFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKA 302
Query: 394 GKLEEAHQYYMEMKEKQL 411
+L++A++ M EK L
Sbjct: 303 NRLDKAYKLMNTMWEKGL 320
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 153/367 (41%), Gaps = 21/367 (5%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
QS ++R+Y+ I +L +FD A + M G SL T T I C +
Sbjct: 37 QSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMI--PQGFSL-TPFTYSRFISALCEIK 93
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVF----PFNTK 173
+ G K+ + I F L+ L R ++ A L F ++ V P +
Sbjct: 94 NFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELA--LKFFDEMVAKGREP-DVV 150
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++ II++ C + E W M +G+ D+ + + ++ + L
Sbjct: 151 TYTIIVDRLCKAKQYDKAVE-FWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVG 209
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ ++ + ++N+++ K + A+++ M + G P+++TYN L+ C
Sbjct: 210 EMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLM 269
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPT---NDT 347
L+ A ++ +M + G+ P + +Y+ L + ++ + L+ +M + G T N
Sbjct: 270 LELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTV 329
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
L K F+ + ++++ E+ + PD ++ LI A + G A M
Sbjct: 330 IGALCKSFATRK----AYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMT 385
Query: 408 EKQLLPE 414
+ L+P+
Sbjct: 386 QTVLIPD 392
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + +R+FD+M + + YN I L A S M +G + TY+
Sbjct: 25 IDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSR 84
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMG 340
I LC+ + + ++M Q G P I ++ +L+++ E + M G
Sbjct: 85 FISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKG 144
Query: 341 CQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAH 400
+P TY +++ + + +Q+ + W + G PD + TAL+ L GK++ A+
Sbjct: 145 REPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAY 204
Query: 401 QYYM-EMK 407
+ + EMK
Sbjct: 205 ELTVGEMK 212
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+R V+ A I K L+ +AI + M + YN I L + D A +
Sbjct: 8 NRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYY 67
Query: 302 DEMLQRGISPTIRTYHAFLDI---IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRW 358
M+ +G S T TY F+ I+ + LLE M+++G P + + + R
Sbjct: 68 SRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRE 127
Query: 359 RQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
K ++E+ G PD +YT ++ L + ++A +++ M K L P+ K
Sbjct: 128 NLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKA 186
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 158/381 (41%), Gaps = 25/381 (6%)
Query: 43 NDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVT 102
ND F L SG ST Y ++I L FD A L +M PS VT
Sbjct: 340 NDARNLFQKLL----HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 395
Query: 103 KQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF 162
++I C + A + + + ++ LC+ V++A L+
Sbjct: 396 YN---VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA--LLL 450
Query: 163 CNK----DVFPFNTKSFNIILNGWCNII--------GSSREAERVWMEMSQRGICYDVVS 210
N+ P N +S N I+ G C G EA R+ M+ G DVV+
Sbjct: 451 FNEMERLGCTP-NRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVT 509
Query: 211 FSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSME 270
+S +IS + L + M + + N +IH L K +K+A ++ +M
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 569
Query: 271 EKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE--- 327
G +P+VVTYN+L+ C+A + + AR+ +M+ RG++P + TY A + +
Sbjct: 570 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 629
Query: 328 EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALI 387
E G+ M+ GC P TY LI F Q K++ E+ G PD Y L
Sbjct: 630 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 689
Query: 388 HALFLNGKLEEAHQYYMEMKE 408
L +G+ A + E +E
Sbjct: 690 AELCKSGRSARALEILREGRE 710
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 19/362 (5%)
Query: 66 REYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
R Y+ +I L + + D A + ++M P + ILI + A N
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPD---SWSYGILIDGLAKAGKLNDARNL 345
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIILNGWCN 184
F + L+ LC + DA L N+ P + ++N++++ C
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 405
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
G EA + +M + G DVV+++ ++ K+ + + L LF++M+R+G +R+
Sbjct: 406 R-GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464
Query: 245 VYNAVI----------HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+N +I A +G+L +A L+K M + G P+VVTY++LI LC ++
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKL-DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 523
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIML 351
D+AR ++M++R PT+ T + + + + G +E +L++M G P TY L
Sbjct: 524 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 583
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
+ R Q ++ +++ G P+ +YTAL+ L +L EA + +MK
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643
Query: 412 LP 413
P
Sbjct: 644 AP 645
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
+ N++L G+C+ G +A + M D VS+ ++ KA + + +RLF
Sbjct: 214 TLNVLLEGFCSR-GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Query: 234 MKRMGIECDR------KVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
+ + YN VI L + + +A+ + + M E+ V+P+ +Y LI
Sbjct: 273 RELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDG 332
Query: 288 LCKARKLDEARQAFDEMLQRGISPTIRTYHAF---LDIIRTGEEVFGLLESMRKMGCQPT 344
L KA KL++AR F ++L G++P+ Y + L + + ++ L M + GC P+
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 392
Query: 345 NDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 404
TY ++I + + ++ E+G+ PD +Y ++ L + ++EEA +
Sbjct: 393 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452
Query: 405 EMKEKQLLP 413
EM+ P
Sbjct: 453 EMERLGCTP 461
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 159/382 (41%), Gaps = 56/382 (14%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
+ T++ L K K D A ++DEMR R I ++
Sbjct: 82 FTTILCGLCKAGKMDEAELVMDEMRS---------------------------RMIPPYF 114
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPF-NTKSFNIILNGWCNII 186
A F L LC +++ A L+ ++ P N+ ++NI++ C
Sbjct: 115 ATSSF-----------LAHELCLRGSMERAFQLL----EIMPVANSSAYNIVVVALCKA- 158
Query: 187 GSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVY 246
+A + MS++ I S ++ + + + L+++ + +R E
Sbjct: 159 ARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTL 215
Query: 247 NAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDE--- 303
N ++ V A L+++M ++ AP+ V+Y +++ LCKA +++EA + F +
Sbjct: 216 NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275
Query: 304 ---MLQRGISPTIRTYH-AFLDIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSR 357
P++R Y+ L + + +E + E M + P + +Y +LI ++
Sbjct: 276 PSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAK 335
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+ + ++ ++ +G P +YT+LIH L + ++A + + +M + P P T
Sbjct: 336 AGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 395
Query: 418 DELLQDWSYNKQFVERQIASLK 439
++ D S + +E +K
Sbjct: 396 YNVMIDASCKRGMLEEACDLIK 417
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 16/221 (7%)
Query: 199 MSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK---VYNAVIHALAK 255
M Q+GI + F+ +I + + +++F M+ EC VYN +I +L+K
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLME----ECHSPYPDVYNVLIDSLSK 56
Query: 256 GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRT 315
+ + +++ M ++G P+ T+ +++ LCKA K+DEA DEM R I P T
Sbjct: 57 RQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFAT 116
Query: 316 YHAFL--DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEI 371
+FL ++ G E F LLE M + Y +++ + + + ++ +
Sbjct: 117 -SSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTM 171
Query: 372 SENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
SE S +++ L +G+++EA Q Y E + + L
Sbjct: 172 SEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL 212
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 44/285 (15%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y T+I+ L + + D A L+++M + P++VT+ TL I C +
Sbjct: 502 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL---IHGLCKAGRI 558
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNI 177
A A + + + L+ CR + A L+ + + P N ++
Sbjct: 559 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP-NVVTYTA 617
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
+++G C EA V+ +M G ++ +++ +I + A + L+LF +M
Sbjct: 618 LVSGLCKA-NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 676
Query: 238 GIECDRKVYNAVIHALAK-GRLVKD----------------------------------- 261
GI D VY + L K GR +
Sbjct: 677 GISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKME 736
Query: 262 -AISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML 305
A+ ++ M G P SL+ LCK+ + EAR +E++
Sbjct: 737 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 304 MLQRGISPTIRTYHAFL----DIIRTGEEV--FGLLESMRKMGCQPTNDTYIMLIKKFSR 357
M Q+GI P + + + ++ RT E V F L+E P D Y +LI S+
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH----SPYPDVYNVLIDSLSK 56
Query: 358 WRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
++ V K+ + + G PD ++T ++ L GK++EA EM+ + + P T
Sbjct: 57 RQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFAT 116
Query: 418 DELL 421
L
Sbjct: 117 SSFL 120
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 172/431 (39%), Gaps = 84/431 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+ +I L KVR+ A L DEM PSL+T TL I YC G +F
Sbjct: 590 YNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL---IDGYCKD---GNPEKSFK 643
Query: 128 AYKRFKFAVGIED----FQGLLSALCRYKNVQDAEHLMFCNKD------VFPF------- 170
+R K A IE F LL L + V+DAE+++ KD F F
Sbjct: 644 VRERMK-ADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGY 702
Query: 171 -----------------------NTKSFNIILNGWCN----------------------- 184
N + +I+LN C
Sbjct: 703 SSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNE 762
Query: 185 ------IIGSSREAERVWMEM-----SQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
I G SR+ + V M ++G+ D ++++C+I + + ++ + ++
Sbjct: 763 VLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNK 822
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK G+ + YN +I + L+K ME+ G PNVV+Y +LI LCK K
Sbjct: 823 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIM 350
L EA+ +M RG+SP +R Y+ +D + E+ F E M K G + TY
Sbjct: 883 LLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNT 942
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
LI S + + EIS G PD +Y +LI G ++ Y EMK
Sbjct: 943 LIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSG 1002
Query: 411 LLPEPKTDELL 421
+ P KT LL
Sbjct: 1003 IKPTLKTYHLL 1013
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 187/443 (42%), Gaps = 53/443 (11%)
Query: 33 LVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR 92
L+S +L+ + EAA FF A + G S+ ++ L K ++F + +
Sbjct: 487 LLSVLLNESKMISEAADLFF--ALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 544
Query: 93 GGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
+ PS K I+ + DVG+ + F K + + + + L+ LC+ +
Sbjct: 545 ESDFRPS---KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVR 601
Query: 153 NVQDAEHLM--FCNKDVFPFNTKSFNIILNGWC------------------NI------- 185
++DAE L + + P + ++N +++G+C NI
Sbjct: 602 QMKDAEQLFDEMLARRLLP-SLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITF 660
Query: 186 ---------IGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
G +AE V EM +G D +FS + YS L +++
Sbjct: 661 NTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVD 720
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G++ + + +++AL K ++ A ++ KG+ PN V YN++I + L
Sbjct: 721 SGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVG 780
Query: 297 ARQAFDEMLQRGISPT-------IRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYI 349
AR D M ++G+ P IRT+ D+ +EV M+ G P+ +TY
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEV----NKMKLKGVSPSVETYN 836
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+LI + R +F F + E+ +NG P+ SY LI+ L KL EA +M+++
Sbjct: 837 ILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 896
Query: 410 QLLPEPKTDELLQDWSYNKQFVE 432
+ P + +L D +K +E
Sbjct: 897 GVSPNVRIYNMLIDGCCSKGKIE 919
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 26/365 (7%)
Query: 68 YHTMIAILGKVRKFDTAWAL--IDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINA 125
Y+TMI G RK D A ID M P + L IR +C + D+ A
Sbjct: 765 YNTMID--GYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL---IRTFCELGDMENAEQE 819
Query: 126 FYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKD--VFPFNTKSFNIILNGWC 183
K + +E + L+ R L+ +D P N S+ ++N C
Sbjct: 820 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMP-NVVSYGTLINCLC 878
Query: 184 NIIGSSR-EAERVWMEMSQRGICYDVVSFSCII-SCYSKARNLHKVLRLFDQMKRMGIEC 241
GS EA+ V +M RG+ +V ++ +I C SK + + R ++M + GIE
Sbjct: 879 K--GSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK-IEDAFRFSEEMFKKGIEL 935
Query: 242 DRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAF 301
+ YN +I L+ + +A ++ + KG+ P+V TYNSLI A + +
Sbjct: 936 NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995
Query: 302 DEMLQRGISPTIRTYHAFLDI-----IRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS 356
+EM GI PT++TYH + + I +++FG +M QP Y ++ ++
Sbjct: 996 EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFG------EMSLQPDLLVYNGVLHCYA 1049
Query: 357 RWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPK 416
F + ++ E G D+++Y +LI GKL E EMK +++ PE
Sbjct: 1050 VHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEAD 1109
Query: 417 TDELL 421
T +++
Sbjct: 1110 TYDII 1114
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 167/362 (46%), Gaps = 18/362 (4%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K G + S Y+ +I G+ +FD + L+ EM T P++V+ TL I C
Sbjct: 824 KLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTL---INCLCKG 880
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDA---EHLMFCNKDVFPFNTK 173
+ A + + + + L+ C ++DA MF K N
Sbjct: 881 SKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF--KKGIELNLV 938
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G ++ G EAE + +E+S++G+ DV +++ +IS Y A N+ + + L+++
Sbjct: 939 TYNTLIDGL-SMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSM-EEKGVAPNVVTYNSLIKPLCKAR 292
MK GI+ K Y+ +I K + I L K + E + P+++ YN ++
Sbjct: 998 MKTSGIKPTLKTYHLLISLCTK-----EGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHG 1052
Query: 293 KLDEARQAFDEMLQRGISPTIRTYHAF-LDIIRTGE--EVFGLLESMRKMGCQPTNDTYI 349
+D+A +M+++ I TY++ L ++ G+ EV L++ M+ +P DTY
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYD 1112
Query: 350 MLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEK 409
+++K + + + + E+ E G D L+ L + +EA EM +
Sbjct: 1113 IIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172
Query: 410 QL 411
+L
Sbjct: 1173 KL 1174
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y+T+I L K A ++ E+ P + T +L I Y +V R I +
Sbjct: 940 YNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSL---ISGYRFAGNVQRCIALYE 996
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIG 187
K ++ + LL +LC + ++ + + F + P + +N +L+ + + G
Sbjct: 997 EMKTSGIKPTLKTYH-LLISLCTKEGIELTKKI-FGEMSLQP-DLLVYNGVLHCYA-VHG 1052
Query: 188 SSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYN 247
+A + +M ++ I D +++ +I K L +V L D+MK +E + Y+
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYD 1112
Query: 248 AVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQR 307
++ + + A + M+EKG+ +V + L+ L + + EA EM R
Sbjct: 1113 IIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172
Query: 308 GISPTI 313
+ I
Sbjct: 1173 KLGDVI 1178
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 174/413 (42%), Gaps = 55/413 (13%)
Query: 48 AFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMR--GGETGPSLVTKQT 105
A FF + + H+ + MI L + D+ L+ +M+ G L
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL----- 113
Query: 106 LLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMF--C 163
+ +I Y V RA+ FY K F ++ + +L L +Q ++++
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ-MIYMVYRDM 172
Query: 164 NKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARN 223
+D F N ++N++L C A+++ +EMS +G C D VS++ +IS +
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKN-NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 224 LHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNS 283
+ + L ++ + + VYNA+I+ L K K A LM+ M EKG++PNV++Y++
Sbjct: 232 VKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 284 LIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAF-------------LDIIRTGEEVF 330
LI LC + +++ A +ML+RG P I T + LD+ F
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 331 GL--------------------------LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNV 364
GL M ++GC P TY LI F++
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 365 FKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+WN++ +G P+ YT ++ AL + K +EA M ++ P T
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 192/470 (40%), Gaps = 72/470 (15%)
Query: 3 TLVDILRE--FSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAG-KQS 59
+++ + R+ + + EM +I+E G S ++ + VL + + + ++ K+
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLL------------ 107
G+ + Y+ ++ L K K D A L+ EM P V+ T++
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 108 ---------------ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYK 152
LI C HD A + + + L++ LC
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 153 NVQDAEHLMF------CNKDVFPF-------------------------------NTKSF 175
++ A + C+ +++ N ++
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 176 NIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMK 235
N ++ G+C+ G+ +A V+ M + G ++ ++ +I+ ++K +L + ++++M
Sbjct: 356 NTLVQGFCSH-GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 236 RMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLD 295
G + VY ++ AL + K+A SL++ M ++ AP+V T+N+ IK LC A +LD
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 296 EARQAFDEMLQRG-ISPTIRTYHAFLDIIRTG---EEVFGLLESMRKMGCQPTNDTYIML 351
A + F +M Q+ P I TY+ LD + EE +GL + G + ++ TY L
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQ 401
+ G ++ ++ +G PD + +I A GK E A Q
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 141 FQGLLSALCRYKNVQDAEHLM-FCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 199
+ ++ ALCR+ ++AE L+ +K+ + +FN + G C+ G AE+V+ +M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA-GRLDWAEKVFRQM 483
Query: 200 SQRGICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRL 258
Q+ C ++V+++ ++ +KA + + L ++ G+E YN ++H L
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 259 VKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEML--QRGISPTIRTY 316
A+ L+ M G +P+ +T N +I CK K + A Q D + +R P + +Y
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603
Query: 317 HAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
+ + R+ E+ LLE M G P+ T+ +LI F
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 55/380 (14%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V I
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S++I+L C+ G S +A+
Sbjct: 150 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYSILLKSLCDQ-GKSGQADD 203
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C +VV+++ +I + K +++K LF +M + GI D YN+V+HA
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263
Query: 253 LAKGRLV-----------------------------------KDAISLMKSMEEKGVAPN 277
L K R + K+A+ + K M + P+
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLE 334
VVT + L+ LCK K+ EAR FD M +G +P + +Y+ L+ T ++ L +
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P T+ +LIK ++ ++NE+ ++G PD +Y +I AL G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
K+++A + + +M ++ + P+
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 173/390 (44%), Gaps = 14/390 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P T +LI+ Y + +A+ F + + ++ +++
Sbjct: 381 LFDLMLGDGIAPDFYTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + ++N ++ G+C GS +A+ + E+ G+
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTH-GSLLKAKELISEIMNNGM 495
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V FS II+ K + +FD +G+ D VY+ ++ ++ A+
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 555
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PNVV Y +L+ CK ++DE F EMLQRGI P+ Y +D +
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G V ++ M + G TY ++++ + R F ++ E+ +
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAH 441
+ +I +F ++EEA + + +L+P T ++ + VE +
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735
Query: 442 QPQSGQ-NTRVISKKSDQDREFLQQPETRR 470
Q + N+R+++ RE L++ E R
Sbjct: 736 QNAGCEPNSRLLNHVV---RELLKKNEIVR 762
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 12/390 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+IA L ++ K D A ++M P K LI+ +C
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYNCLIQGFCTH 477
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ +A + I F +++ LC+ V DA+++ + N + P +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-DAVV 536
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++++++G+C ++G +A RV+ M GI +VV + +++ Y K + + L LF +M
Sbjct: 537 YSMLMDGYC-LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595
Query: 235 KRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ GI+ +Y+ +I L + GR V + M E G+A ++ TYN +++ L K R
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKF-HEMTESGIAMDICTYNIVLRGLFKNRC 654
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
DEA F E+ + I T + +D + R EE L S+ + P+ TY +
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 714
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + +++ + G P+ ++ L ++ A Y ++ E+
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKA 440
E T LL D +K I L A
Sbjct: 775 FSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 49/363 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G Y++++ L K R D A A + +M P+ T L I Y +
Sbjct: 247 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL---IYGYSSTG 303
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
A+ F +R + L+ +LC+Y
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY-------------------------- 337
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
G +EA V+ M+ +G DV S++ +++ Y+ L + LFD M
Sbjct: 338 ---------GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D +N +I A A ++ A+ + M + GV P+VVTY ++I LC+ K+D+A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS- 356
+ F++M+ +G++P Y+ + G G L +++ + N+ + I FS
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQ----GFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504
Query: 357 ---RWRQFGNVFKVWN--EISEN-GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ G V N +++ N G PD Y+ L+ L GK+E+A + + M
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 411 LLP 413
+ P
Sbjct: 565 IEP 567
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ + + N ++ + + +A+ L+
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 172
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-IIRT 325
E G P+V +Y+ L+K LC K +A M + G SP + Y+ +D +
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 232
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R ++ P+ +Y
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 292
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLKAH 441
LI+ G+ +EA + + EM+ +LP+ T +L Y K R + A
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352
Query: 442 QPQSGQNTRVIS 453
+ GQN V S
Sbjct: 353 K---GQNPDVFS 361
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 164/363 (45%), Gaps = 10/363 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
K+ G Y+T+I GK+ D + L +EM+ P ++T LI +C
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA---LINSFCKF 215
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ RA F K + + L+ ALC+ +Q A + P N +
Sbjct: 216 KGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLP-NEFT 274
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++ +++ C G+ EA + EM Q + ++V+++ ++ + +++ LF M
Sbjct: 275 YSSLIDANCK-AGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
+ G+ + + Y A+IH K R + A+ L M EK + P+++ + +++ LC KL
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIML 351
+E + EM + GI Y +D + G E LLE MR +G + T T+ L
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I + + + ++ P+ + YTALI L N + +A + + EM++K +
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513
Query: 412 LPE 414
+P+
Sbjct: 514 IPD 516
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 4/244 (1%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++NI++ C G A ++ +M + G+ D+V+++ +I Y K L + + LF++
Sbjct: 134 TYNIMIGHVCKE-GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEE 192
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK MG E D YNA+I++ K + + A + M++K + PNV++Y++LI LCK
Sbjct: 193 MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIM 350
+ A + F +M + G+ P TY + +D + G E F L + M + TY
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
L+ +++ + + G P+ +YTALIH +++A + + EM+EK
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372
Query: 411 LLPE 414
+ P+
Sbjct: 373 IKPD 376
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 10/256 (3%)
Query: 174 SFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQ 233
++N +++G+ I G E+ ++ EM G DV++++ +I+ + K + + + F +
Sbjct: 169 TYNTLIDGYGKI-GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFRE 227
Query: 234 MKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
MK ++ + Y+ +I AL K +++ AI M G+ PN TY+SLI CKA
Sbjct: 228 MKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGN 287
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLD------IIRTGEEVFGLLESMRKMGCQPTNDT 347
L EA DEMLQ + I TY LD ++ EE+F +M K G P
Sbjct: 288 LGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF---RAMGKAGVTPNLQA 344
Query: 348 YIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMK 407
Y LI + R +++NE+ E PD + ++ L KLEE EMK
Sbjct: 345 YTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMK 404
Query: 408 EKQLLPEPKTDELLQD 423
E + P L D
Sbjct: 405 ESGIGANPVIYTTLMD 420
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 15/272 (5%)
Query: 159 HLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVS-FSCIISC 217
H++F + F N ++L+ W ++ S E +W + R +C F + S
Sbjct: 17 HILFYARMYFHANNILKELVLSSW--VLPGSDVFEILW---TTRNVCVPGFGVFDALFSV 71
Query: 218 YSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAK---GRLVKDAISLMKSMEEKGV 274
+ L + F +M + + + NA +H L+K G L +D + M G+
Sbjct: 72 LVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD---FFRDMVGAGI 128
Query: 275 APNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFG 331
AP V TYN +I +CK + AR F++M + G++P I TY+ +D I +E
Sbjct: 129 APTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVC 188
Query: 332 LLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALF 391
L E M+ MGC+P TY LI F +++ F+ + E+ + P+ SY+ LI AL
Sbjct: 189 LFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALC 248
Query: 392 LNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
G ++ A +++++M LLP T L D
Sbjct: 249 KEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 14/411 (3%)
Query: 7 ILREFSHKRSEMRNKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTR 66
+LR F R EM++K + + S L+ + + A FF+ + G +
Sbjct: 218 MLRAFEFFR-EMKDKDLKPNVISYSTLIDALCK--EGMMQMAIKFFVDM-TRVGLLPNEF 273
Query: 67 EYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAF 126
Y ++I K A+ L DEM ++VT TLL C + A F
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLL---DGLCEEGMMNEAEELF 330
Query: 127 YAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSFNIILNGWCN 184
A + ++ + L+ + +++ A L KD+ P + + I+ G C+
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKP-DILLWGTIVWGLCS 389
Query: 185 IIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRK 244
E + + EM + GI + V ++ ++ Y KA N + + L ++M+ +G E
Sbjct: 390 E-SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448
Query: 245 VYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEM 304
+ A+I L K LV++AI M + + PNV Y +LI LCK + +A++ FDEM
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508
Query: 305 LQRGISPTIRTYHAFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQF 361
+ + P Y A +D ++ G +E + M +MG + Y L+ S+ Q
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQV 568
Query: 362 GNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLL 412
K E+ G PD + T L+ + G ++EA + E+ EK L+
Sbjct: 569 QQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGR 257
+M GI V +++ +I K ++ LF+QMK+MG+ D YN +I K
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181
Query: 258 LVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYH 317
L+ +++ L + M+ G P+V+TYN+LI CK + + A + F EM + + P + +Y
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241
Query: 318 AFLD-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISEN 374
+D + + G + M ++G P TY LI + G F + +E+ +
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301
Query: 375 GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLP 413
+ +YT L+ L G + EA + + M + + P
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 159/371 (42%), Gaps = 26/371 (7%)
Query: 59 SGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHD 118
+G+ T Y +I L + + A+ L EM+G P + T ILI +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT---ILIDCFSKAGI 539
Query: 119 VGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFN 176
+ +A N R + + L+ A + K V A L + K FP N ++
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYT 598
Query: 177 IILNGWCNIIGSSREAERVWMEMSQRGICYDV----------------VSFSCIISCYSK 220
+++G+C G+ +A +++ M DV V++ ++ K
Sbjct: 599 ALIDGYCKS-GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657
Query: 221 ARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVT 280
A + L + M G E + VY+A+I K + +A + M E G PNV T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717
Query: 281 YNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD---IIRTGEEVFGLLESMR 337
Y+SLI L K ++LD + +ML+ +P I Y +D + +E + L+ M
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
+ GC+P TY +I F + + +++ E+ G P+ +YT LI+ G L+
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837
Query: 398 EAHQYYMEMKE 408
EA+ EMK+
Sbjct: 838 EAYALLEEMKQ 848
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 165/374 (44%), Gaps = 36/374 (9%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
+ G + Y T+I K +K A L + M P+++T L I YC
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL---IDGYCKSG 608
Query: 118 DVGRAINAFYAYKRFKFAVGIED-------------------FQGLLSALCRYKNVQDAE 158
++ +A Y R + I D + L+ LC+ V+DA
Sbjct: 609 NIEKACQI---YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665
Query: 159 HL---MFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCII 215
L MF D NT ++ +++G+C EA+ V+ +M + G +V ++S +I
Sbjct: 666 DLLETMFV--DGCEPNTIVYDALIDGFCKA-AKLDEAQEVFHKMVEHGYNPNVYTYSSLI 722
Query: 216 SCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVA 275
K + L VL++ +M + +Y +I L+K +A LM MEEKG
Sbjct: 723 DRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782
Query: 276 PNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-IIRTG--EEVFGL 332
PNVVTY ++I KA K+D+ + F EM +G +P TY ++ TG +E + L
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL 842
Query: 333 LESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFL 392
LE M++ +Y +I+ + R+F + E+ +NG+ P Y LI
Sbjct: 843 LEEMKQTYWPKHVSSYCKVIEGYK--REFILSLGLLEEVEKNGSAPIILLYKVLIDNFVK 900
Query: 393 NGKLEEAHQYYMEM 406
G+LE A + + E+
Sbjct: 901 AGRLEVALELHKEV 914
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 38/376 (10%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVG------- 120
+++++ K F A+ L+ +M E P V ILI C+ ++
Sbjct: 381 FNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYN---ILIGSICSGGELPGPVTFEL 437
Query: 121 --RAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNII 178
+A N + V + F L +++ H M N F +T +++ +
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG--FVPDTSTYSEV 495
Query: 179 LNGWCNIIGSSR--EAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKR 236
+ CN +SR A ++ EM G+ DV +++ +I C+SKA + + D+M R
Sbjct: 496 IGFLCN---ASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Query: 237 MGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDE 296
G E Y +IHA K + V A L + M KG PNV+TY +LI CK+ +++
Sbjct: 553 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 612
Query: 297 ARQAFDEM--------------LQRGIS--PTIRTYHAFLDIIRTGEEV---FGLLESMR 337
A Q + M ++ ++ P + TY A +D + +V LLE+M
Sbjct: 613 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 672
Query: 338 KMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLE 397
GC+P Y LI F + + +V++++ E+G P+ +Y++LI LF + +L+
Sbjct: 673 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 732
Query: 398 EAHQYYMEMKEKQLLP 413
+ +M E P
Sbjct: 733 LVLKVLSKMLENSCAP 748
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 175/423 (41%), Gaps = 51/423 (12%)
Query: 28 KVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWAL 87
K++ +LV E+LS++++ E FFLWAG+Q GY H+ Y ++ + +
Sbjct: 135 KLNPDLVVEILSFLKSP-ELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEF 193
Query: 88 IDEMRGGETGPSLVTKQTLLILIRRYC-------AVHDVGRAINAFYAYKRFKFAVGIED 140
+ E+RG + V + L +LIR+ C A+ ++GR + Y R + ++
Sbjct: 194 LREIRGDDKE---VLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQV 250
Query: 141 F------------------QGL----------LSALCRYKNVQDAEHLMFCNKDVFPFNT 172
F GL ALC+ ++A L+ K+ F NT
Sbjct: 251 FLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI--EKEDFVPNT 308
Query: 173 KSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFD 232
+N +++G C EA M +V ++ ++ + L + R+
Sbjct: 309 ILYNKMISGLCE-ASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILS 367
Query: 233 QMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKAR 292
M G ++N+++HA K A L+K ME+ P V YN LI +C
Sbjct: 368 MMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGG 427
Query: 293 KL------DEARQAFDEMLQRGI---SPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQP 343
+L + A +A++EML G + ++ L E+ + ++ M G P
Sbjct: 428 ELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVP 487
Query: 344 TNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYY 403
TY +I + N F ++ E+ G PD +YT LI G +++AH +
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547
Query: 404 MEM 406
EM
Sbjct: 548 DEM 550
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 162/370 (43%), Gaps = 10/370 (2%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G + Y+ MI L + + + A EMR P ++T +LL YC
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLL---NGYCKA 391
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKS 174
+ A+ F + A + + L+ CR ++++A L + P + +
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP-DVCT 450
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
+ I++ G N S A + EM +G+ D +++ I + K RL + M
Sbjct: 451 YTILMKGSHNAC-SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVM 509
Query: 235 KRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKL 294
GI D YN +I L K + DA L M G+ P+ +TY LI C+ L
Sbjct: 510 MLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLL 569
Query: 295 DEARQAFDEMLQRGISPTIRTYHAFLDI-IRTGE--EVFGLLESMRKMGCQPTNDTYIML 351
EAR+ F +M+ G++P+ TY F+ R G +G M + G +P TY +L
Sbjct: 570 REARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629
Query: 352 IKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQL 411
I R + ++ ++E+ E G P++ +YT LI G E+A ++Y EM + +
Sbjct: 630 IHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGI 689
Query: 412 LPEPKTDELL 421
P+ T + L
Sbjct: 690 HPDYLTHKAL 699
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 149/293 (50%), Gaps = 17/293 (5%)
Query: 141 FQGLLSALCRYKNVQDAEHLMFCN---KDVFPFNTKSFNIILNGWCNIIGSSREAERVWM 197
+ LL+ C+ ++++A L+F + + P ++NI+++G+C + G EA R+
Sbjct: 381 YNSLLNGYCKAGSLKEAL-LLFGDLRHAGLAP-TVLTYNILIDGYCRL-GDLEEARRLKE 437
Query: 198 EMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA-LAKG 256
EM ++G DV +++ ++ A +L FD+M G++ D YN I A L G
Sbjct: 438 EMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLG 497
Query: 257 RLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTY 316
+ K A L + M +G++ + VTYN LI LCK L++A+ +M+ G+ P TY
Sbjct: 498 AIAK-AFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556
Query: 317 ----HAFLD--IIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNE 370
HA + ++R + F + M G P+ TY + I + R + + + +
Sbjct: 557 TCLIHAHCERGLLREARKFF---KDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRK 613
Query: 371 ISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD 423
+ E G P+ +Y LIHAL G+ + A++++ EM E+ L+P T LL D
Sbjct: 614 MLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 167/396 (42%), Gaps = 40/396 (10%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G A ++ + ++ +L ++D A+ EM PS+VT TLL + V
Sbjct: 197 GVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKV 256
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIIL 179
+ + +++ L R ++++A ++ + ++ ++N ++
Sbjct: 257 AMLLKEMETRGSGCLPNDVT-HNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLI 315
Query: 180 NGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGI 239
G G ++A+ + +EM GI VV+++ +I ++ + F +M+ MG+
Sbjct: 316 TGLL-AKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGL 374
Query: 240 ECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQ 299
+ D YN++++ K +K+A+ L + G+AP V+TYN LI C+ L+EAR+
Sbjct: 375 QPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARR 434
Query: 300 AFDEMLQRGISPTIRTYHAFL-----------------DIIRTG---------------- 326
+EM+++G P + TY + +++ G
Sbjct: 435 LKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAEL 494
Query: 327 -----EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ F L E M G TY +LI + + + ++ NG PD
Sbjct: 495 TLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCI 554
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKT 417
+YT LIHA G L EA +++ +M L P T
Sbjct: 555 TYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVT 590
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 65/338 (19%)
Query: 68 YHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFY 127
Y++++ K A L ++R P+++T ILI YC + D+ A
Sbjct: 381 YNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYN---ILIDGYCRLGDLEEA----- 432
Query: 128 AYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN-----------------KDVFPF 170
+R K + +E QG L +C Y + H C+ D F +
Sbjct: 433 --RRLKEEM-VE--QGCLPDVCTYTILMKGSH-NACSLAMAREFFDEMLSKGLQPDCFAY 486
Query: 171 NTK------------------------------SFNIILNGWCNIIGSSREAERVWMEMS 200
NT+ ++NI+++G C G+ +A+ + M+M
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKT-GNLNDAKDLQMKMV 545
Query: 201 QRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVK 260
G+ D ++++C+I + + L + + F M G+ Y IHA + +
Sbjct: 546 HNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLY 605
Query: 261 DAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL 320
A + M E+GV PN +TYN LI LC+ + A + F EML+RG+ P TY +
Sbjct: 606 SAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLI 665
Query: 321 D-IIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKF 355
D + G E+ M + G P T+ L K F
Sbjct: 666 DGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 16/270 (5%)
Query: 195 VWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIEC--DRKVYNAVIHA 252
V EM Q GI +V+++ ++ + K KV L +M+ G C + +N VI
Sbjct: 224 VHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITG 283
Query: 253 LAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPT 312
LA+ +++A +++ M A + TYN LI L + +A EM GI PT
Sbjct: 284 LARKGDLEEAAEMVEGMRLSKKASSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPT 342
Query: 313 IRTYHAFL-DIIRTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWN 369
+ TY+A + ++++G+ ++ MR MG QP TY L+ + + ++
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402
Query: 370 EISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYN-- 427
++ G P +Y LI G LEEA + EM E+ LP+ T +L S+N
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462
Query: 428 -----KQFVERQIASLKAHQPQS-GQNTRV 451
++F + ++ K QP NTR+
Sbjct: 463 SLAMAREFFDEMLS--KGLQPDCFAYNTRI 490
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 228 LRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKP 287
L F +M G+ D K N V+ L+ D ++ M + G+ P++VTYN+L+
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246
Query: 288 LCKARKLDEARQAFDEMLQRGIS--PTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQ 342
K + D+ EM RG P T++ + + R G EE ++E MR + +
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKK 305
Query: 343 PTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQY 402
++ TY LI + E+ G P +Y A+IH L +G++E A
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365
Query: 403 YMEMKEKQLLPE 414
++EM+ L P+
Sbjct: 366 FVEMRAMGLQPD 377
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 168/388 (43%), Gaps = 12/388 (3%)
Query: 42 RNDWEAAFTFFLWAGK-QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSL 100
+ + + AF F +AGK G++H+ YH++I L + R FD +L+ ++ +
Sbjct: 25 QENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIK- 83
Query: 101 VTKQTLLILIRRYCAVHDVGRAINAFYAYKR-FKFAVGIEDFQGLLSALCRYKNVQDAEH 159
+ +IR Y A+ F K F ++ LL+ + K
Sbjct: 84 CGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGS 143
Query: 160 LMFCNKD---VFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIIS 216
+ KD V P N SFNI++ C A +V+ EM G+ ++V+++ I+
Sbjct: 144 TLKNCKDKYGVLP-NVFSFNILIKALCKK-NDVENALKVFDEMPTMGMIPNLVTYTTILG 201
Query: 217 CYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAP 276
+ +L ++F ++ G D Y ++ K + DAI +M +ME GV P
Sbjct: 202 GFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEP 261
Query: 277 NVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTG---EEVFGLL 333
N VTY +I CK +K EAR D+ML + P+ +D++ E L
Sbjct: 262 NEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLW 321
Query: 334 ESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLN 393
+ M + C P N LI + + K+++E E G P +Y LI +
Sbjct: 322 KRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCER 380
Query: 394 GKLEEAHQYYMEMKEKQLLPEPKTDELL 421
G+L EA + + +M EK+ P T +L
Sbjct: 381 GELNEAGRLWDDMVEKRCRPNAFTYNML 408
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 44/326 (13%)
Query: 108 ILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLM--FCNK 165
ILI+ C +DV A+ F + + +L ++ +AE + +K
Sbjct: 163 ILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDK 222
Query: 166 DVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLH 225
P + ++ +++ G+C G +A +V M G+ + V++ +I Y K +
Sbjct: 223 GWLP-DATTYTVLMVGYCKQ-GRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSG 280
Query: 226 KVLRLFDQM-------------KRMGIEC-DRKVYNA---------------------VI 250
+ L D M K + + C D KV NA +I
Sbjct: 281 EARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLI 340
Query: 251 HALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGIS 310
H L K V +A L E+ G P+++TYN+LI +C+ +L+EA + +D+M+++
Sbjct: 341 HWLCKEGKVWEARKLFDEFEQ-GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCR 399
Query: 311 PTIRTYHAFL-DIIRTG--EEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKV 367
P TY+ + ++ G +E +LE M GC P TY +LI+ G+V KV
Sbjct: 400 PNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKV 459
Query: 368 WNEISENGNGPDRSSYTALIHALFLN 393
+ ++ D S+ +H + N
Sbjct: 460 MS-MAMASREVDADSWDLFLHKIVGN 484
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 49/264 (18%)
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKR-MGIECDRKVYNAVIHALAKGRLVKDAI 263
C D V F +I Y A L+ F ++K ++ K+ N +++ + +
Sbjct: 84 CGDDV-FISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVG 142
Query: 264 SLMKSMEEK-GVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFL-- 320
S +K+ ++K GV PNV ++N LIK LCK ++ A + FDEM G+ P + TY L
Sbjct: 143 STLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGG 202
Query: 321 -----DIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENG 375
D++ E+VF + G P TY +L+ + + + + KV + + NG
Sbjct: 203 FVSRGDLV-NAEKVF---SEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNG 258
Query: 376 NGPDRSSYTALIHA-----------------------------------LFLNGKLEEAH 400
P+ +Y +I A L +GK+E A
Sbjct: 259 VEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENAC 318
Query: 401 QYYMEMKEKQLLPEPKTDELLQDW 424
+ M EK LP+ L W
Sbjct: 319 HLWKRMLEKNCLPDNAIMSTLIHW 342
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 8/231 (3%)
Query: 60 GYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDV 119
G+ Y ++ K + A ++D M P+ VT ++I YC
Sbjct: 223 GWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYG---VMIDAYCKEKKS 279
Query: 120 GRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKSFNI 177
G A N KF ++ LC V++A HL K+ P N +
Sbjct: 280 GEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL 339
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
I W G EA +++ E Q G +++++ +I+ + L++ RL+D M
Sbjct: 340 I--HWLCKEGKVWEARKLFDEFEQ-GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEK 396
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPL 288
+ YN +I K +VK+ + +++ M + G PN TY LI+ L
Sbjct: 397 RCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 55/380 (14%)
Query: 84 AWALIDEMRGGETGPSLV--TKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDF 141
A AL + GP ++ T T IL+ H A+ F R V I
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 162
Query: 142 QGLLSALCRYKNVQDAEHLMF-------CNKDVFPFNTKSFNIILNGWCNIIGSSREAER 194
LL C K +A ++ C DVF S++I+L C+ G S +A+
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF-----SYSILLKSLCDQ-GKSGQADD 216
Query: 195 VWMEMSQRG-ICY-DVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHA 252
+ M++ G +C +VV+++ +I + K +++K LF +M + GI D YN+V+HA
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276
Query: 253 LAKGRLV-----------------------------------KDAISLMKSMEEKGVAPN 277
L K R + K+A+ + K M + P+
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336
Query: 278 VVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLDIIRTGE---EVFGLLE 334
VVT + L+ LCK K+ EAR FD M +G +P + +Y+ L+ T ++ L +
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396
Query: 335 SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNG 394
M G P T+ +LIK ++ ++NE+ ++G PD +Y +I AL G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456
Query: 395 KLEEAHQYYMEMKEKQLLPE 414
K+++A + + +M ++ + P+
Sbjct: 457 KMDDAMEKFNQMIDQGVAPD 476
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 173/390 (44%), Gaps = 14/390 (3%)
Query: 87 LIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLS 146
L D M G P T +LI+ Y + +A+ F + + ++ +++
Sbjct: 394 LFDLMLGDGIAPDFYTFN---VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 450
Query: 147 ALCRYKNVQDA--EHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGI 204
ALCR + DA + ++ V P + ++N ++ G+C GS +A+ + E+ G+
Sbjct: 451 ALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTH-GSLLKAKELISEIMNNGM 508
Query: 205 CYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS 264
D+V FS II+ K + +FD +G+ D VY+ ++ ++ A+
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 568
Query: 265 LMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHAFLD-II 323
+ +M G+ PNVV Y +L+ CK ++DE F EMLQRGI P+ Y +D +
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628
Query: 324 RTGEEVFGLLE--SMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRS 381
+ G V ++ M + G TY ++++ + R F ++ E+ +
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 688
Query: 382 SYTALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQDWSYNKQFVERQIASLKAH 441
+ +I +F ++EEA + + +L+P T ++ + VE +
Sbjct: 689 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM 748
Query: 442 QPQSGQ-NTRVISKKSDQDREFLQQPETRR 470
Q + N+R+++ RE L++ E R
Sbjct: 749 QNAGCEPNSRLLNHVV---RELLKKNEIVR 775
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 12/390 (3%)
Query: 57 KQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAV 116
+ G Y T+IA L ++ K D A ++M P K LI+ +C
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD---KYAYNCLIQGFCTH 490
Query: 117 HDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHL--MFCNKDVFPFNTKS 174
+ +A + I F +++ LC+ V DA+++ + N + P +
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-DAVV 549
Query: 175 FNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQM 234
++++++G+C ++G +A RV+ M GI +VV + +++ Y K + + L LF +M
Sbjct: 550 YSMLMDGYC-LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608
Query: 235 KRMGIECDRKVYNAVIHALAK-GRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARK 293
+ GI+ +Y+ +I L + GR V + M E G+A ++ TYN +++ L K R
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKF-HEMTESGIAMDICTYNIVLRGLFKNRC 667
Query: 294 LDEARQAFDEMLQRGISPTIRTYHAFLDII---RTGEEVFGLLESMRKMGCQPTNDTYIM 350
DEA F E+ + I T + +D + R EE L S+ + P TY +
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSI 727
Query: 351 LIKKFSRWRQFGNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+I + +++ + G P+ ++ L ++ A Y ++ E+
Sbjct: 728 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 787
Query: 411 LLPEPKTDELLQDWSYNKQFVERQIASLKA 440
E T LL D +K QI L A
Sbjct: 788 FSLEHLTAMLLVDLFSSKGTCREQIRFLPA 817
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 49/363 (13%)
Query: 58 QSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVH 117
Q G Y++++ L K R D A A + +M P+ T L I Y +
Sbjct: 260 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL---IYGYSSTG 316
Query: 118 DVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNI 177
A+ F +R + L+ +LC+Y
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY-------------------------- 350
Query: 178 ILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRM 237
G +EA V+ M+ +G DV S++ +++ Y+ L + LFD M
Sbjct: 351 ---------GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401
Query: 238 GIECDRKVYNAVIHALAKGRLVKDAISLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEA 297
GI D +N +I A A ++ A+ + M + GV P+VVTY ++I LC+ K+D+A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 298 RQAFDEMLQRGISPTIRTYHAFLDIIRTGEEVFGLLESMRKMGCQPTNDTYIMLIKKFS- 356
+ F++M+ +G++P Y+ + G G L +++ + N+ + I FS
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQ----GFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517
Query: 357 ---RWRQFGNVFKVWN--EISEN-GNGPDRSSYTALIHALFLNGKLEEAHQYYMEMKEKQ 410
+ G V N +++ N G PD Y+ L+ L GK+E+A + + M
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577
Query: 411 LLP 413
+ P
Sbjct: 578 IEP 580
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 210 SFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAIS-LMKS 268
+++ ++ C ++A L F Q+ R G+ + + N ++ + + +A+ L+
Sbjct: 126 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHR 185
Query: 269 MEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRG--ISPTIRTYHAFLD-IIRT 325
E G P+V +Y+ L+K LC K +A M + G SP + Y+ +D +
Sbjct: 186 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 245
Query: 326 GE--EVFGLLESMRKMGCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGPDRSSY 383
G+ + L + M + G P TY ++ + R ++ P+ +Y
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305
Query: 384 TALIHALFLNGKLEEAHQYYMEMKEKQLLPEPKTDELLQD--WSYNKQFVERQIASLKAH 441
LI+ G+ +EA + + EM+ +LP+ T +L Y K R + A
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 365
Query: 442 QPQSGQNTRVIS 453
+ GQN V S
Sbjct: 366 K---GQNPDVFS 374
>gi|297820986|ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324214|gb|EFH54635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 201/434 (46%), Gaps = 19/434 (4%)
Query: 29 VSSELVSEVLSWV---RNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAW 85
+S E VSEVL + ++ A FF ++ K S + ++ + + IL ++R FD AW
Sbjct: 64 LSPEFVSEVLGSLFAAHSNGLKALEFFKYSLKSSNSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 86 ALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKR--FKFAVGIEDFQG 143
AL+ E+R + P L++ +++ I++ + + AF ++ F+ G+++F
Sbjct: 124 ALMAEIR--KDYPDLLSFKSMSIILCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNI 181
Query: 144 LLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRG 203
LL A C + +++A + F + K+ NI+L G+ G E + EM +RG
Sbjct: 182 LLRAFCTEREMKEARSIFEKLHSRFKPDVKTMNILLLGFKE-AGDITATELFYHEMVKRG 240
Query: 204 ICYDVVSFSCIISCYSKARNLHKVLRLFDQMKRMGIECDRKVYNAVIHALAKGRLVKDAI 263
+ V++ I + K RN + LRLF+ M R I ++ +IH R A
Sbjct: 241 FKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRQDIYITVQILTTLIHGSGVVRNKIKAR 300
Query: 264 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIRTYHA-FLDI 322
L + ++G+ P+ YN+L+ L K + +A + EM ++ I P T+H+ F+ +
Sbjct: 301 QLFDEIPKRGLTPDCGAYNALMSSLMKCGDVSDAIKVMKEMEEKEIEPDSVTFHSMFIGM 360
Query: 323 IRTGEEVF-GLLESMRKM---GCQPTNDTYIMLIKKFSRWRQFGNVFKVWNEISENGNGP 378
+++ E F G+ E +KM P T +ML+K F + + +W + E G P
Sbjct: 361 MKSKEFGFSGVCEYYQKMKERSLVPKTPTVVMLMKLFCQNGEVNLGLDLWKYMLEKGYCP 420
Query: 379 DRSSYTALIHALFLNGKLEEAHQYYMEMKEK-QLLPEPKTDELLQDWSYNKQF-----VE 432
+ L AL + +A + + E+ + + EP L S N + ++
Sbjct: 421 HGHALELLTTALCARRRANDAFECSRQTVERGRCVSEPVYRMLETSLSSNNELKKLEELK 480
Query: 433 RQIASLKAHQPQSG 446
+I L + P G
Sbjct: 481 GKIQKLHSFLPPPG 494
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,374,042,255
Number of Sequences: 23463169
Number of extensions: 299343330
Number of successful extensions: 875334
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6637
Number of HSP's successfully gapped in prelim test: 5041
Number of HSP's that attempted gapping in prelim test: 733976
Number of HSP's gapped (non-prelim): 66550
length of query: 481
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 335
effective length of database: 8,933,572,693
effective search space: 2992746852155
effective search space used: 2992746852155
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)